Query psy14257
Match_columns 841
No_of_seqs 462 out of 4042
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:25:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14257.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14257hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3m0c_C LDL receptor, low-densi 100.0 3.6E-83 1.2E-87 767.2 45.3 505 2-636 156-713 (791)
2 1n7d_A LDL receptor, low-densi 100.0 3E-80 1E-84 740.3 39.3 508 2-634 60-693 (699)
3 4a0p_A LRP6, LRP-6, low-densit 100.0 7.2E-75 2.5E-79 683.5 57.8 463 218-836 4-480 (628)
4 3s94_A LRP-6, low-density lipo 100.0 3.6E-75 1.2E-79 685.6 54.6 467 219-837 8-483 (619)
5 3p5b_L Low density lipoprotein 100.0 3.8E-64 1.3E-68 563.8 41.2 383 132-632 1-397 (400)
6 3v65_B Low-density lipoprotein 100.0 3.6E-63 1.2E-67 553.8 39.5 377 132-632 4-385 (386)
7 3v64_C Agrin; beta propeller, 100.0 2E-56 6.9E-61 492.3 37.7 337 172-632 1-342 (349)
8 3s94_A LRP-6, low-density lipo 100.0 1.1E-53 3.8E-58 502.9 42.3 392 218-632 49-617 (619)
9 3m0c_C LDL receptor, low-densi 100.0 8.2E-54 2.8E-58 513.1 41.5 425 2-566 78-587 (791)
10 4a0p_A LRP6, LRP-6, low-densit 100.0 2.5E-53 8.6E-58 500.1 35.3 339 171-632 264-619 (628)
11 1n7d_A LDL receptor, low-densi 100.0 1.7E-51 5.7E-56 492.0 29.5 438 2-566 17-569 (699)
12 3sov_A LRP-6, low-density lipo 100.0 1.4E-49 4.9E-54 431.0 34.0 300 218-633 2-309 (318)
13 1ijq_A LDL receptor, low-densi 100.0 1.9E-47 6.7E-52 415.2 37.3 299 220-632 1-315 (316)
14 3p5b_L Low density lipoprotein 100.0 6.8E-32 2.3E-36 302.1 32.7 311 107-549 12-342 (400)
15 3v65_B Low-density lipoprotein 100.0 3.9E-32 1.3E-36 302.9 27.4 301 113-548 23-339 (386)
16 3v64_C Agrin; beta propeller, 100.0 3.1E-31 1.1E-35 291.4 28.2 287 132-548 2-296 (349)
17 1npe_A Nidogen, entactin; glyc 100.0 2.1E-27 7.3E-32 250.8 29.7 239 329-584 11-255 (267)
18 1npe_A Nidogen, entactin; glyc 99.9 2E-25 6.7E-30 235.7 28.1 253 221-549 2-261 (267)
19 3sov_A LRP-6, low-density lipo 99.9 6.3E-25 2.1E-29 237.6 31.1 250 413-799 5-260 (318)
20 1ijq_A LDL receptor, low-densi 99.9 6.2E-24 2.1E-28 230.1 35.9 248 414-799 3-260 (316)
21 3s25_A Hypothetical 7-bladed b 99.9 2.1E-22 7.2E-27 215.3 29.8 262 264-575 27-299 (302)
22 4hw6_A Hypothetical protein, I 99.9 1.7E-19 5.9E-24 203.3 29.6 252 247-566 137-431 (433)
23 3tc9_A Hypothetical hydrolase; 99.8 2.8E-19 9.5E-24 201.7 28.1 250 295-566 135-428 (430)
24 3s25_A Hypothetical 7-bladed b 99.8 5.2E-18 1.8E-22 181.2 32.1 261 412-830 25-301 (302)
25 4hw6_A Hypothetical protein, I 99.8 1.5E-18 5.2E-23 195.6 27.9 261 347-699 137-432 (433)
26 3tc9_A Hypothetical hydrolase; 99.8 6.4E-19 2.2E-23 198.7 24.4 254 248-524 136-429 (430)
27 3hrp_A Uncharacterized protein 99.8 4.5E-18 1.5E-22 190.7 29.5 250 248-524 130-409 (409)
28 3hrp_A Uncharacterized protein 99.8 1.1E-17 3.6E-22 187.7 31.5 250 295-566 129-408 (409)
29 3kya_A Putative phosphatase; s 99.8 7.6E-18 2.6E-22 189.5 29.2 252 294-568 136-475 (496)
30 2qc5_A Streptogramin B lactona 99.8 1.5E-16 5.2E-21 169.1 29.6 279 248-566 19-298 (300)
31 3kya_A Putative phosphatase; s 99.8 1.4E-17 4.8E-22 187.4 22.2 260 248-527 138-477 (496)
32 3fvz_A Peptidyl-glycine alpha- 99.8 1.1E-16 3.6E-21 174.2 28.5 262 295-567 22-321 (329)
33 2qc5_A Streptogramin B lactona 99.8 7.8E-16 2.7E-20 163.5 34.4 268 413-821 31-299 (300)
34 1rwi_B Serine/threonine-protei 99.8 3.3E-17 1.1E-21 171.9 21.5 238 250-568 25-264 (270)
35 2fp8_A Strictosidine synthase; 99.7 1.6E-16 5.4E-21 172.2 25.6 249 292-567 14-312 (322)
36 2z2n_A Virginiamycin B lyase; 99.7 5.2E-15 1.8E-19 157.0 36.5 270 413-823 26-296 (299)
37 2z2n_A Virginiamycin B lyase; 99.7 1.2E-15 4.2E-20 162.0 30.7 281 249-569 15-296 (299)
38 3fvz_A Peptidyl-glycine alpha- 99.7 4.1E-16 1.4E-20 169.5 26.6 257 249-526 24-323 (329)
39 1q7f_A NHL, brain tumor CG1071 99.7 2.8E-15 9.6E-20 158.9 26.7 240 248-565 29-277 (286)
40 1rwi_B Serine/threonine-protei 99.7 4.3E-15 1.5E-19 155.7 25.7 241 445-825 25-267 (270)
41 1q7f_A NHL, brain tumor CG1071 99.6 1.9E-13 6.4E-18 144.7 32.6 249 441-821 27-279 (286)
42 2fyj_A Low-density lipoprotein 99.6 1.5E-16 5E-21 133.1 5.4 63 2-69 16-80 (82)
43 2p4o_A Hypothetical protein; p 99.6 2.7E-14 9.3E-19 153.4 24.2 227 297-558 32-279 (306)
44 2fp8_A Strictosidine synthase; 99.6 4.7E-14 1.6E-18 152.6 24.0 251 248-531 18-319 (322)
45 3dsm_A Uncharacterized protein 99.6 4.5E-13 1.6E-17 145.4 30.6 289 413-796 2-319 (328)
46 2fcw_B LDL receptor, low-densi 99.6 1.2E-16 3.9E-21 132.7 0.3 63 2-69 14-78 (80)
47 3g4e_A Regucalcin; six bladed 99.6 1.2E-13 4E-18 147.7 23.1 213 342-576 6-237 (297)
48 3dsm_A Uncharacterized protein 99.6 2.8E-13 9.6E-18 147.0 26.1 241 265-546 56-319 (328)
49 2p4o_A Hypothetical protein; p 99.6 5.6E-13 1.9E-17 143.1 25.9 237 249-514 32-278 (306)
50 2ism_A Putative oxidoreductase 99.6 1.1E-13 3.7E-18 151.7 20.6 243 290-558 24-335 (352)
51 3a9g_A Putative uncharacterize 99.6 3.1E-13 1.1E-17 148.0 23.6 249 290-566 22-350 (354)
52 3g4e_A Regucalcin; six bladed 99.5 4.7E-13 1.6E-17 143.0 24.4 240 247-558 11-263 (297)
53 3e5z_A Putative gluconolactona 99.5 3.4E-12 1.1E-16 135.9 31.0 267 230-570 9-288 (296)
54 2fyj_A Low-density lipoprotein 99.5 5E-15 1.7E-19 123.8 6.7 76 30-131 3-80 (82)
55 2fcw_B LDL receptor, low-densi 99.5 2.6E-15 9E-20 124.5 2.6 72 31-128 2-73 (80)
56 3dr2_A Exported gluconolactona 99.5 2.1E-12 7.3E-17 138.4 25.4 257 238-565 34-303 (305)
57 2qe8_A Uncharacterized protein 99.5 1.7E-12 5.7E-17 141.8 24.3 239 297-561 17-314 (343)
58 3vgz_A Uncharacterized protein 99.5 1.1E-10 3.9E-15 126.5 38.1 276 444-809 41-334 (353)
59 3vgz_A Uncharacterized protein 99.5 4.6E-11 1.6E-15 129.7 34.1 271 250-557 42-334 (353)
60 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 1.3E-11 4.6E-16 131.9 25.8 261 241-567 10-298 (314)
61 3a9g_A Putative uncharacterize 99.4 3.9E-11 1.3E-15 131.3 29.4 114 442-560 71-220 (354)
62 3hfq_A Uncharacterized protein 99.4 2E-10 7E-15 124.8 34.3 267 295-572 38-323 (347)
63 2g8s_A Glucose/sorbosone dehyd 99.4 6.6E-12 2.2E-16 137.5 22.1 257 290-566 11-352 (353)
64 1ri6_A Putative isomerase YBHE 99.4 4.2E-10 1.4E-14 121.2 35.5 309 413-802 5-336 (343)
65 3e5z_A Putative gluconolactona 99.4 2.9E-11 1E-15 128.6 25.7 204 345-575 24-252 (296)
66 1ri6_A Putative isomerase YBHE 99.4 5.3E-10 1.8E-14 120.5 35.6 285 264-570 6-312 (343)
67 3u4y_A Uncharacterized protein 99.4 8.4E-11 2.9E-15 126.7 28.4 274 264-567 11-303 (331)
68 3das_A Putative oxidoreductase 99.4 4.1E-11 1.4E-15 129.2 25.3 259 240-558 23-328 (347)
69 2dg1_A DRP35, lactonase; beta 99.4 1.5E-10 5.3E-15 125.0 29.4 263 240-565 36-313 (333)
70 2ism_A Putative oxidoreductase 99.4 2E-11 7E-16 133.5 22.4 208 344-569 26-298 (352)
71 3dr2_A Exported gluconolactona 99.4 4.1E-11 1.4E-15 128.3 23.7 206 344-574 40-272 (305)
72 2qe8_A Uncharacterized protein 99.4 1.2E-10 4.1E-15 127.0 27.6 277 444-810 17-311 (343)
73 3u4y_A Uncharacterized protein 99.4 3.2E-09 1.1E-13 114.2 38.4 291 412-827 9-309 (331)
74 3hfq_A Uncharacterized protein 99.3 2.8E-10 9.7E-15 123.6 28.6 267 232-524 21-316 (347)
75 1l0q_A Surface layer protein; 99.3 1.4E-08 4.8E-13 111.9 41.5 275 413-825 2-278 (391)
76 2dg1_A DRP35, lactonase; beta 99.3 4.9E-09 1.7E-13 113.1 35.3 260 441-824 42-318 (333)
77 1l0q_A Surface layer protein; 99.3 1.8E-09 6.1E-14 119.2 32.0 277 264-576 3-283 (391)
78 3scy_A Hypothetical bacterial 99.3 2E-09 7E-14 117.6 31.7 309 445-822 3-337 (361)
79 2ghs_A AGR_C_1268P; regucalcin 99.3 7.2E-10 2.5E-14 119.9 27.0 240 241-558 40-293 (326)
80 3scy_A Hypothetical bacterial 99.3 2.6E-09 8.8E-14 116.8 31.8 265 295-570 48-341 (361)
81 3bws_A Protein LP49; two-domai 99.3 4.2E-08 1.4E-12 109.7 41.6 285 407-822 129-432 (433)
82 2g8s_A Glucose/sorbosone dehyd 99.3 2.1E-10 7.3E-15 125.4 21.7 265 238-523 7-352 (353)
83 2w2n_E LDL receptor, low-densi 99.3 1.5E-12 5.2E-17 115.4 3.4 89 121-212 17-107 (107)
84 3das_A Putative oxidoreductase 99.3 4.2E-09 1.4E-13 113.5 30.9 113 442-559 78-223 (347)
85 2ghs_A AGR_C_1268P; regucalcin 99.3 3.9E-10 1.3E-14 121.9 23.0 209 342-575 42-266 (326)
86 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.5E-10 1.2E-14 120.8 22.0 213 345-574 14-262 (314)
87 2p9w_A MAL S 1 allergenic prot 99.2 7.4E-10 2.5E-14 117.0 22.1 243 250-557 14-304 (334)
88 3c75_H MADH, methylamine dehyd 99.2 1E-09 3.5E-14 122.1 24.0 286 265-575 87-409 (426)
89 3qqz_A Putative uncharacterize 99.2 2E-09 6.7E-14 111.0 24.1 205 349-568 27-253 (255)
90 2mad_H Methylamine dehydrogena 99.2 2.4E-08 8.3E-13 109.9 34.5 285 265-575 35-357 (373)
91 1jof_A Carboxy-CIS,CIS-muconat 99.2 6E-09 2.1E-13 114.3 27.8 263 249-529 40-345 (365)
92 1nir_A Nitrite reductase; hemo 99.2 2.2E-07 7.6E-12 107.6 42.1 335 413-824 149-516 (543)
93 3bws_A Protein LP49; two-domai 99.2 6.2E-08 2.1E-12 108.3 36.2 224 329-570 102-336 (433)
94 3qqz_A Putative uncharacterize 99.2 2.6E-09 9E-14 110.1 22.0 212 297-525 27-253 (255)
95 3c75_H MADH, methylamine dehyd 99.1 4.2E-08 1.4E-12 109.1 32.8 292 412-777 84-409 (426)
96 1cru_A Protein (soluble quinop 99.1 2.9E-09 1E-13 120.1 22.3 295 238-563 16-431 (454)
97 3sjl_D Methylamine dehydrogena 99.1 6.9E-09 2.4E-13 113.4 24.3 287 265-576 47-371 (386)
98 2iwa_A Glutamine cyclotransfer 99.1 7.1E-09 2.4E-13 107.4 23.2 199 349-566 21-235 (266)
99 2iwa_A Glutamine cyclotransfer 99.1 8.2E-09 2.8E-13 107.0 22.9 204 297-526 21-238 (266)
100 1nir_A Nitrite reductase; hemo 99.1 9.4E-08 3.2E-12 110.7 34.3 335 222-584 150-531 (543)
101 2mad_H Methylamine dehydrogena 99.1 4.3E-07 1.5E-11 99.8 37.9 301 413-797 33-370 (373)
102 3sjl_D Methylamine dehydrogena 99.1 2.1E-07 7.3E-12 101.6 34.6 310 409-799 41-384 (386)
103 2p9w_A MAL S 1 allergenic prot 99.1 6.7E-09 2.3E-13 109.7 21.7 208 347-562 11-259 (334)
104 1z6c_A Vitamin K-dependent pro 99.1 3.1E-11 1.1E-15 102.9 3.2 80 132-214 4-86 (87)
105 2oiz_A Aromatic amine dehydrog 99.1 1.5E-07 5.2E-12 103.0 32.9 305 412-801 15-360 (361)
106 1lmj_A Fibrillin 1; EGF, calci 99.1 6.6E-11 2.2E-15 100.7 4.1 78 132-211 4-85 (86)
107 1pby_B Quinohemoprotein amine 99.0 7.5E-08 2.6E-12 103.1 28.5 270 228-528 10-313 (337)
108 1pby_B Quinohemoprotein amine 99.0 5.8E-07 2E-11 96.1 35.4 277 414-773 2-312 (337)
109 2oiz_A Aromatic amine dehydrog 99.0 8.9E-08 3E-12 104.9 28.1 295 265-584 18-352 (361)
110 3sre_A PON1, serum paraoxonase 99.0 8.3E-08 2.8E-12 103.8 27.0 190 271-524 81-297 (355)
111 2bou_A EGF-like module contain 99.0 1.7E-10 5.7E-15 108.7 4.8 106 101-214 8-139 (143)
112 1qks_A Cytochrome CD1 nitrite 99.0 3.9E-06 1.4E-10 97.2 42.6 334 407-821 162-537 (567)
113 1mda_H Methylamine dehydrogena 99.0 4.4E-08 1.5E-12 107.0 24.2 300 412-799 31-367 (368)
114 1jof_A Carboxy-CIS,CIS-muconat 99.0 3.2E-07 1.1E-11 100.4 31.4 282 265-567 5-340 (365)
115 3sre_A PON1, serum paraoxonase 99.0 2.8E-08 9.7E-13 107.5 22.0 114 441-567 162-297 (355)
116 2wg3_C Hedgehog-interacting pr 99.0 1.6E-08 5.5E-13 113.9 20.3 256 290-565 7-370 (463)
117 1dx5_I Thrombomodulin; serine 99.0 9.5E-11 3.3E-15 106.2 1.3 96 108-211 15-118 (118)
118 1emn_A Fibrillin; extracellula 98.9 6.3E-10 2.2E-14 93.6 5.3 74 132-211 6-81 (82)
119 2xrc_A Human complement factor 98.9 5.5E-10 1.9E-14 129.3 6.4 93 3-131 183-275 (565)
120 1mda_H Methylamine dehydrogena 98.9 6.5E-08 2.2E-12 105.7 22.0 279 265-576 34-354 (368)
121 1qks_A Cytochrome CD1 nitrite 98.9 2.2E-06 7.5E-11 99.3 34.7 335 222-584 168-555 (567)
122 3nol_A Glutamine cyclotransfer 98.9 3.6E-07 1.2E-11 93.5 24.6 198 298-523 44-254 (262)
123 2kny_A LRP-1, linker, APO-E; l 98.9 1.9E-10 6.4E-15 95.0 0.0 72 26-116 3-74 (80)
124 1cr8_A Protein (LOW density li 98.8 1.4E-09 4.9E-14 77.8 3.5 38 30-69 2-39 (42)
125 3nok_A Glutaminyl cyclase; bet 98.8 4.9E-07 1.7E-11 92.5 23.2 111 408-523 141-264 (268)
126 3mbr_X Glutamine cyclotransfer 98.8 1.3E-06 4.5E-11 88.6 25.5 201 297-525 21-235 (243)
127 3nol_A Glutamine cyclotransfer 98.8 9.8E-07 3.4E-11 90.3 24.6 199 497-769 46-254 (262)
128 2ymu_A WD-40 repeat protein; u 98.8 0.00073 2.5E-08 78.0 59.2 311 413-830 192-506 (577)
129 3no2_A Uncharacterized protein 98.8 2.3E-06 7.9E-11 89.8 27.4 255 265-546 7-273 (276)
130 1ajj_A LR5, low-density lipopr 98.8 1.7E-09 5.8E-14 75.2 2.1 36 31-69 1-36 (37)
131 3no2_A Uncharacterized protein 98.8 5.1E-07 1.7E-11 94.9 22.2 216 326-566 13-251 (276)
132 3dpr_E LDL-receptor class A 3; 98.8 3.4E-09 1.2E-13 74.5 3.4 36 32-69 1-37 (39)
133 2gtl_O Extracellular hemoglobi 98.8 4.3E-11 1.5E-15 116.9 -8.8 52 12-69 39-91 (215)
134 2jm4_A Relaxin receptor 1; LDL 98.8 2.9E-09 9.9E-14 76.7 3.0 39 29-69 4-42 (43)
135 1x7a_L Coagulation factor IX, 98.8 5.2E-09 1.8E-13 98.4 5.2 76 132-215 49-128 (146)
136 1d2l_A Lipoprotein receptor re 98.8 3.5E-09 1.2E-13 76.7 3.0 37 30-69 4-40 (45)
137 1jmx_B Amine dehydrogenase; ox 98.7 8.6E-06 2.9E-10 87.4 31.2 290 413-773 11-327 (349)
138 3a7q_B Low-density lipoprotein 98.7 2.6E-09 8.9E-14 77.3 2.1 38 29-69 5-42 (44)
139 2m0p_A Low-density lipoprotein 98.7 1.6E-09 5.3E-14 80.5 0.9 38 29-69 4-41 (52)
140 1k7b_A Subgroup A ROUS sarcoma 98.7 3.2E-09 1.1E-13 78.2 2.2 38 30-69 5-46 (47)
141 2vj3_A Neurogenic locus notch 98.7 2.2E-08 7.4E-13 93.1 8.4 95 99-211 12-117 (135)
142 2knx_A Prolow-density lipoprot 98.7 4.1E-09 1.4E-13 78.2 2.7 38 30-69 5-42 (50)
143 2xrc_A Human complement factor 98.7 5.6E-09 1.9E-13 120.9 5.1 61 2-69 215-275 (565)
144 1jmx_B Amine dehydrogenase; ox 98.7 5.1E-06 1.7E-10 89.2 27.0 266 265-575 13-332 (349)
145 2i1p_A Low-density lipoprotein 98.7 3.2E-09 1.1E-13 78.5 0.9 40 26-69 2-42 (48)
146 2ece_A 462AA long hypothetical 98.7 2.8E-06 9.6E-11 93.5 24.5 239 262-512 95-399 (462)
147 1cru_A Protein (soluble quinop 98.7 1.9E-07 6.5E-12 105.3 15.7 159 344-516 22-249 (454)
148 1jrf_A TVA LDL-A module, subgr 98.7 5.2E-09 1.8E-13 77.1 1.7 38 30-69 3-44 (47)
149 2jkh_L Factor X light chain; p 98.7 6.4E-09 2.2E-13 79.7 2.2 45 132-176 2-46 (55)
150 1yo8_A Thrombospondin-2; EGF, 98.7 3.4E-08 1.2E-12 113.3 9.1 104 101-212 10-145 (634)
151 3nok_A Glutaminyl cyclase; bet 98.6 3.1E-06 1.1E-10 86.6 22.0 192 352-565 58-263 (268)
152 2ymu_A WD-40 repeat protein; u 98.6 0.0019 6.6E-08 74.4 58.0 363 351-830 183-547 (577)
153 1uzk_A Fibrillin-1; glycoprote 98.6 3.5E-09 1.2E-13 101.8 0.0 104 101-212 11-162 (162)
154 1z1y_A Ookinete surface protei 98.6 7.3E-09 2.5E-13 102.1 1.3 102 100-212 54-178 (186)
155 3mbr_X Glutamine cyclotransfer 98.6 9.8E-06 3.4E-10 82.2 24.2 194 351-565 23-232 (243)
156 1aut_L Activated protein C; se 98.6 5.4E-08 1.9E-12 87.4 6.7 65 144-214 27-95 (114)
157 1j8e_A Low-density lipoprotein 98.6 1E-08 3.4E-13 74.3 1.0 37 30-69 3-39 (44)
158 2wph_E Coagulation factor IXA 98.6 3E-08 1E-12 76.9 3.4 51 134-188 2-53 (59)
159 1fwx_A Nitrous oxide reductase 98.6 1.4E-06 4.7E-11 99.2 18.3 271 264-546 103-451 (595)
160 1nfu_B Coagulation factor XA, 98.5 2.4E-08 8.2E-13 97.7 3.3 75 132-214 43-122 (195)
161 1k32_A Tricorn protease; prote 98.5 0.00089 3E-08 83.7 44.9 416 273-808 33-491 (1045)
162 1kig_L Factor XA; glycoprotein 98.5 2.9E-08 1E-12 74.6 2.2 42 134-175 1-42 (51)
163 1kli_L Factor VIIA; extrinsic 98.5 3.2E-08 1.1E-12 79.3 2.2 45 132-176 6-51 (69)
164 3q6k_A 43.2 kDa salivary prote 98.5 0.00018 6.1E-09 77.9 32.3 265 444-810 26-344 (381)
165 2w86_A Fibrillin-1, fibrillin1 98.5 1.4E-08 4.7E-13 96.0 -0.2 102 101-211 11-146 (147)
166 2vh0_B Activated factor XA lig 98.5 5.7E-08 2E-12 89.9 3.7 75 132-214 43-122 (134)
167 2bz6_L Blood coagulation facto 98.5 4.5E-08 1.5E-12 74.2 2.1 42 134-175 2-44 (53)
168 1k32_A Tricorn protease; prote 98.4 0.0014 4.8E-08 81.9 43.5 313 222-575 26-416 (1045)
169 2c4f_L Coagulation factor VII 98.4 1.6E-07 5.5E-12 87.9 5.2 76 132-215 48-131 (142)
170 2ece_A 462AA long hypothetical 98.4 1.5E-05 5.1E-10 87.7 21.4 217 327-555 105-399 (462)
171 1pgu_A Actin interacting prote 98.4 0.0081 2.8E-07 69.4 49.9 498 250-823 20-573 (615)
172 1x7a_L Coagulation factor IX, 98.4 1.8E-07 6E-12 87.8 4.4 70 101-175 55-130 (146)
173 1aut_L Activated protein C; se 98.4 2.2E-07 7.5E-12 83.4 4.6 69 101-174 21-97 (114)
174 1z1y_A Ookinete surface protei 98.4 1.2E-07 4E-12 93.4 2.9 102 101-214 12-137 (186)
175 3q6k_A 43.2 kDa salivary prote 98.4 6.5E-05 2.2E-09 81.4 24.3 220 295-557 85-343 (381)
176 2kny_A LRP-1, linker, APO-E; l 98.3 4E-08 1.4E-12 81.0 -0.9 52 2-53 21-75 (80)
177 4d90_A EGF-like repeat and dis 98.3 4.3E-07 1.5E-11 85.2 6.0 90 101-204 7-128 (143)
178 3h5c_B Vitamin K-dependent pro 98.3 5.3E-07 1.8E-11 96.8 7.2 70 140-215 12-86 (317)
179 3pe7_A Oligogalacturonate lyas 98.3 0.00054 1.9E-08 74.6 31.5 299 449-822 41-384 (388)
180 1lmj_A Fibrillin 1; EGF, calci 98.3 2.1E-07 7.1E-12 78.9 2.2 65 100-170 11-86 (86)
181 2ecf_A Dipeptidyl peptidase IV 98.3 0.0012 4.1E-08 78.9 35.7 159 348-513 36-228 (741)
182 3sfz_A APAF-1, apoptotic pepti 98.3 0.026 9E-07 71.6 49.7 148 220-382 627-776 (1249)
183 1fwx_A Nitrous oxide reductase 98.2 2.2E-05 7.6E-10 89.3 18.4 199 359-568 100-361 (595)
184 2hqs_A Protein TOLB; TOLB, PAL 98.2 0.00059 2E-08 75.8 29.7 245 423-800 159-409 (415)
185 1z6c_A Vitamin K-dependent pro 98.2 6.9E-07 2.4E-11 75.8 4.1 61 107-173 16-87 (87)
186 1kli_L Factor VIIA; extrinsic 98.2 4.5E-07 1.5E-11 72.6 2.8 42 591-632 4-45 (69)
187 3pe7_A Oligogalacturonate lyas 98.2 0.00017 5.8E-09 78.7 24.6 287 254-566 41-382 (388)
188 1cr8_A Protein (LOW density li 98.2 7.3E-07 2.5E-11 63.7 3.5 38 93-131 2-39 (42)
189 3amr_A 3-phytase; beta-propell 98.2 0.00014 4.7E-09 77.5 22.3 146 414-567 88-262 (355)
190 1r5m_A SIR4-interacting protei 98.2 0.0082 2.8E-07 65.5 37.9 280 445-822 110-425 (425)
191 2wg3_C Hedgehog-interacting pr 98.2 2.8E-05 9.6E-10 87.4 17.6 209 343-566 8-310 (463)
192 1ajj_A LR5, low-density lipopr 98.2 6.4E-07 2.2E-11 62.1 2.6 36 94-131 1-36 (37)
193 2ojh_A Uncharacterized protein 98.2 0.00017 5.9E-09 74.5 22.6 206 298-532 43-265 (297)
194 2knx_A Prolow-density lipoprot 98.1 1.4E-06 4.7E-11 64.6 3.8 42 93-135 5-46 (50)
195 1pgu_A Actin interacting prote 98.1 0.02 7E-07 66.0 41.7 419 249-807 161-602 (615)
196 3amr_A 3-phytase; beta-propell 98.1 0.00012 4.3E-09 77.9 20.0 180 329-526 51-264 (355)
197 2gtl_O Extracellular hemoglobi 98.1 1.4E-07 4.8E-12 92.2 -2.5 58 2-75 68-125 (215)
198 1d2l_A Lipoprotein receptor re 98.1 1.3E-06 4.3E-11 63.2 3.1 37 93-131 4-40 (45)
199 2hqs_A Protein TOLB; TOLB, PAL 98.1 0.00022 7.5E-09 79.3 23.1 232 229-532 159-394 (415)
200 2wph_E Coagulation factor IXA 98.1 1E-06 3.4E-11 68.2 2.7 38 595-632 2-39 (59)
201 2i1p_A Low-density lipoprotein 98.1 6.5E-07 2.2E-11 66.0 1.5 39 92-131 4-42 (48)
202 1nfu_B Coagulation factor XA, 98.1 6.9E-07 2.4E-11 87.4 2.1 68 101-173 49-123 (195)
203 2z3z_A Dipeptidyl aminopeptida 98.1 0.001 3.5E-08 79.2 30.2 281 250-570 83-437 (706)
204 1gxr_A ESG1, transducin-like e 98.1 0.015 5E-07 61.2 36.4 275 442-809 50-327 (337)
205 2m0p_A Low-density lipoprotein 98.1 7.7E-07 2.6E-11 66.0 1.7 37 93-131 5-41 (52)
206 3dpr_E LDL-receptor class A 3; 98.1 1.9E-06 6.3E-11 60.5 3.5 37 95-131 1-37 (39)
207 2jm4_A Relaxin receptor 1; LDL 98.1 1.5E-06 5E-11 62.5 2.9 38 93-131 5-42 (43)
208 2bz6_L Blood coagulation facto 98.1 1.1E-06 3.7E-11 66.5 2.2 38 595-632 2-39 (53)
209 2ecf_A Dipeptidyl peptidase IV 98.1 0.0015 5.2E-08 78.0 31.1 327 444-830 37-423 (741)
210 2gtl_M Hemoglobin linker chain 98.1 1.4E-06 4.8E-11 85.1 3.2 41 27-69 49-92 (217)
211 2c4f_L Coagulation factor VII 98.1 1.4E-06 4.8E-11 81.4 3.1 69 101-174 54-132 (142)
212 1tpg_A T-plasminogen activator 98.1 3.4E-06 1.2E-10 72.0 5.2 77 113-212 1-85 (91)
213 1k7b_A Subgroup A ROUS sarcoma 98.1 1.6E-06 5.6E-11 63.6 2.6 38 93-131 5-46 (47)
214 2vh0_B Activated factor XA lig 98.0 1.2E-06 3.9E-11 81.0 2.1 69 101-174 49-124 (134)
215 1dx5_I Thrombomodulin; serine 98.0 2E-06 6.9E-11 77.5 3.6 75 132-215 5-81 (118)
216 3a7q_B Low-density lipoprotein 98.0 1.7E-06 5.7E-11 62.5 2.4 37 93-131 6-42 (44)
217 3h5c_B Vitamin K-dependent pro 98.0 4.6E-06 1.6E-10 89.4 6.8 70 101-175 12-88 (317)
218 2ojh_A Uncharacterized protein 98.0 0.00045 1.5E-08 71.4 21.6 256 229-513 22-291 (297)
219 2z3z_A Dipeptidyl aminopeptida 98.0 0.01 3.5E-07 70.4 36.1 284 413-773 93-437 (706)
220 3mkq_A Coatomer beta'-subunit; 98.0 0.066 2.3E-06 64.3 49.5 147 420-575 116-266 (814)
221 1yo8_A Thrombospondin-2; EGF, 98.0 1.1E-05 3.7E-10 92.7 8.8 81 132-218 4-106 (634)
222 2bou_A EGF-like module contain 98.0 2.4E-06 8.3E-11 80.0 2.7 71 101-176 54-143 (143)
223 2gtl_N Extracellular hemoglobi 97.9 1.2E-06 4E-11 84.7 0.1 44 2-46 66-112 (220)
224 1jrf_A TVA LDL-A module, subgr 97.9 2.7E-06 9.2E-11 62.5 1.8 38 93-131 3-44 (47)
225 2gtl_N Extracellular hemoglobi 97.9 4.3E-06 1.5E-10 80.8 3.5 38 28-67 49-87 (220)
226 2w2n_E LDL receptor, low-densi 97.9 2.8E-06 9.6E-11 74.9 1.8 59 107-170 41-107 (107)
227 3c5m_A Oligogalacturonate lyas 97.9 0.0018 6.1E-08 70.4 24.9 82 446-533 38-119 (396)
228 3sfz_A APAF-1, apoptotic pepti 97.9 0.14 4.6E-06 65.0 48.3 423 249-799 616-1055(1249)
229 1j8e_A Low-density lipoprotein 97.9 3.4E-06 1.2E-10 60.8 1.8 37 93-131 3-39 (44)
230 1emn_A Fibrillin; extracellula 97.9 9.2E-06 3.1E-10 67.9 4.7 61 101-169 13-81 (82)
231 1gxr_A ESG1, transducin-like e 97.9 0.019 6.4E-07 60.3 32.0 146 414-572 154-300 (337)
232 3zwl_B Eukaryotic translation 97.9 0.042 1.4E-06 58.4 35.1 286 249-566 33-344 (369)
233 4aez_A CDC20, WD repeat-contai 97.9 0.0088 3E-07 65.5 30.2 270 270-572 110-384 (401)
234 2jkh_L Factor X light chain; p 97.9 9.2E-06 3.2E-10 62.0 4.0 42 173-216 2-44 (55)
235 1apq_A Complement protease C1R 97.9 5.6E-06 1.9E-10 62.8 2.6 33 139-171 20-52 (53)
236 1kig_L Factor XA; glycoprotein 97.8 7.3E-06 2.5E-10 61.4 2.7 37 595-632 1-37 (51)
237 3azo_A Aminopeptidase; POP fam 97.8 0.0041 1.4E-07 73.2 27.6 227 327-571 101-372 (662)
238 1uzk_A Fibrillin-1; glycoprote 97.8 4.4E-06 1.5E-10 80.0 1.5 71 132-205 4-86 (162)
239 3mkq_A Coatomer beta'-subunit; 97.8 0.13 4.3E-06 61.8 49.7 279 209-523 16-300 (814)
240 3o4h_A Acylamino-acid-releasin 97.8 0.0021 7E-08 74.6 23.8 112 413-533 34-149 (582)
241 1r5m_A SIR4-interacting protei 97.8 0.015 5.1E-07 63.3 29.8 295 250-570 47-363 (425)
242 2vj3_A Neurogenic locus notch 97.8 1.5E-05 5.2E-10 73.6 4.1 65 101-176 52-125 (135)
243 1apq_A Complement protease C1R 97.7 2.5E-05 8.7E-10 59.1 4.4 42 170-213 2-52 (53)
244 3azo_A Aminopeptidase; POP fam 97.7 0.0019 6.6E-08 76.1 22.5 246 265-534 94-378 (662)
245 3c5m_A Oligogalacturonate lyas 97.7 0.001 3.5E-08 72.4 18.6 150 413-570 201-386 (396)
246 2vdu_B TRNA (guanine-N(7)-)-me 97.7 0.039 1.3E-06 61.4 31.8 230 250-512 104-371 (450)
247 3hxj_A Pyrrolo-quinoline quino 97.7 0.0052 1.8E-07 65.0 22.9 197 327-556 116-313 (330)
248 3ojy_B Complement component C8 97.6 1.6E-05 5.6E-10 90.5 2.8 61 4-69 35-101 (537)
249 3o4h_A Acylamino-acid-releasin 97.6 0.00037 1.3E-08 81.0 13.7 212 329-565 45-273 (582)
250 1xfd_A DIP, dipeptidyl aminope 97.5 0.017 5.8E-07 68.6 27.8 271 228-526 36-396 (723)
251 2gtl_M Hemoglobin linker chain 97.5 6.7E-06 2.3E-10 80.4 -1.8 38 2-39 67-105 (217)
252 2vj2_A Jagged-1; signalling, p 97.5 3.6E-05 1.2E-09 74.0 2.9 83 107-203 77-163 (169)
253 2pm9_A Protein WEB1, protein t 97.5 0.0085 2.9E-07 65.5 22.1 228 327-569 88-338 (416)
254 1xfd_A DIP, dipeptidyl aminope 97.4 0.0083 2.8E-07 71.3 23.2 301 251-566 19-393 (723)
255 3ojy_A Complement component C8 97.4 4.6E-05 1.6E-09 86.9 2.9 61 3-69 32-100 (554)
256 2pm9_A Protein WEB1, protein t 97.4 0.0066 2.2E-07 66.4 20.1 253 250-526 69-338 (416)
257 3ow8_A WD repeat-containing pr 97.4 0.2 6.8E-06 52.8 32.0 141 413-564 176-317 (321)
258 4a5s_A Dipeptidyl peptidase 4 97.4 0.36 1.2E-05 57.5 36.2 127 672-829 322-456 (740)
259 4aez_A CDC20, WD repeat-contai 97.4 0.25 8.6E-06 53.7 36.4 277 407-772 98-381 (401)
260 1k8k_C P40, ARP2/3 complex 41 97.3 0.15 5E-06 54.3 29.4 73 443-525 202-274 (372)
261 4g56_B MGC81050 protein; prote 97.3 0.075 2.6E-06 57.1 27.1 127 669-830 227-353 (357)
262 1sq9_A Antiviral protein SKI8; 97.3 0.28 9.5E-06 52.8 33.6 299 250-569 18-396 (397)
263 2aq5_A Coronin-1A; WD40 repeat 97.3 0.089 3E-06 57.3 27.1 275 415-772 49-343 (402)
264 2aq5_A Coronin-1A; WD40 repeat 97.2 0.041 1.4E-06 60.1 24.1 130 414-548 189-323 (402)
265 2xyi_A Probable histone-bindin 97.2 0.014 4.9E-07 64.6 20.5 252 249-525 129-410 (430)
266 2w86_A Fibrillin-1, fibrillin1 97.2 9.8E-05 3.4E-09 69.2 2.2 50 121-170 91-147 (147)
267 2xdw_A Prolyl endopeptidase; a 97.2 0.21 7.1E-06 59.2 31.9 299 453-830 81-424 (710)
268 2vdu_B TRNA (guanine-N(7)-)-me 97.2 0.44 1.5E-05 52.7 34.0 255 495-809 104-373 (450)
269 4d90_A EGF-like repeat and dis 97.2 0.00039 1.3E-08 64.7 5.6 54 101-161 59-127 (143)
270 2xdw_A Prolyl endopeptidase; a 97.1 0.1 3.6E-06 61.8 27.8 245 306-575 81-375 (710)
271 1vyh_C Platelet-activating fac 97.1 0.48 1.6E-05 51.8 31.3 274 250-562 110-405 (410)
272 3mmy_A MRNA export factor; mRN 97.1 0.39 1.3E-05 50.6 30.4 275 414-767 55-345 (368)
273 3f1s_B Vitamin K-dependent pro 97.1 0.00022 7.6E-09 74.8 3.5 44 132-175 3-47 (283)
274 1got_B GT-beta; complex (GTP-b 97.1 0.4 1.4E-05 50.7 30.4 231 326-575 75-308 (340)
275 3hxj_A Pyrrolo-quinoline quino 97.1 0.035 1.2E-06 58.5 20.9 207 330-572 80-287 (330)
276 2xyi_A Probable histone-bindin 97.1 0.051 1.8E-06 60.1 23.1 244 297-565 129-407 (430)
277 4a5s_A Dipeptidyl peptidase 4 97.0 0.048 1.6E-06 65.1 23.1 121 446-569 262-401 (740)
278 3iuj_A Prolyl endopeptidase; h 97.0 0.5 1.7E-05 55.8 31.6 152 645-832 259-415 (693)
279 1sq9_A Antiviral protein SKI8; 96.9 0.51 1.7E-05 50.6 28.4 273 229-525 36-395 (397)
280 1z68_A Fibroblast activation p 96.9 0.13 4.6E-06 60.8 25.6 269 227-526 34-394 (719)
281 4gqb_B Methylosome protein 50; 96.9 0.088 3E-06 56.4 21.7 242 251-524 85-330 (344)
282 4g56_B MGC81050 protein; prote 96.9 0.16 5.3E-06 54.6 23.8 236 408-701 100-344 (357)
283 3i2n_A WD repeat-containing pr 96.8 0.32 1.1E-05 51.2 26.1 255 250-525 20-291 (357)
284 4a2l_A BT_4663, two-component 96.8 1.4 4.8E-05 52.8 44.0 310 225-569 146-481 (795)
285 2gop_A Trilobed protease; beta 96.8 0.099 3.4E-06 55.4 21.6 166 327-526 42-253 (347)
286 4a9v_A PHOX; hydrolase, beta-p 96.8 0.0042 1.4E-07 70.0 10.7 130 294-464 381-551 (592)
287 2gop_A Trilobed protease; beta 96.8 0.33 1.1E-05 51.2 25.5 99 422-532 42-169 (347)
288 1szb_A Mannose binding lectin- 96.8 0.00047 1.6E-08 66.3 2.5 41 132-172 125-168 (170)
289 3k26_A Polycomb protein EED; W 96.8 0.71 2.4E-05 48.5 28.5 164 350-525 20-192 (366)
290 3vl1_A 26S proteasome regulato 96.8 0.85 2.9E-05 49.3 33.1 286 450-808 104-408 (420)
291 3i2n_A WD repeat-containing pr 96.7 0.21 7.2E-06 52.6 23.7 265 228-524 43-352 (357)
292 1vyh_C Platelet-activating fac 96.7 0.94 3.2E-05 49.3 31.4 286 413-769 120-409 (410)
293 1yfq_A Cell cycle arrest prote 96.7 0.33 1.1E-05 50.8 24.8 255 251-528 14-285 (342)
294 3vl1_A 26S proteasome regulato 96.7 0.92 3.1E-05 49.1 39.8 108 413-530 109-217 (420)
295 2ygq_A WIF-1, WNT inhibitory f 96.7 0.0012 4.2E-08 70.2 5.3 86 101-214 218-309 (324)
296 3zwl_B Eukaryotic translation 96.6 0.86 2.9E-05 47.9 39.5 272 413-772 44-347 (369)
297 2ovr_B FBW7, F-BOX/WD repeat p 96.6 1.1 3.9E-05 49.1 35.6 142 415-572 171-312 (445)
298 1yr2_A Prolyl oligopeptidase; 96.6 0.69 2.4E-05 55.0 29.3 235 306-566 116-393 (741)
299 3ojy_A Complement component C8 96.6 0.002 6.8E-08 73.4 6.4 36 94-132 65-101 (554)
300 1szb_A Mannose binding lectin- 96.6 0.0013 4.5E-08 63.1 4.2 52 158-214 113-168 (170)
301 1yfq_A Cell cycle arrest prote 96.6 0.91 3.1E-05 47.4 28.6 254 444-774 12-285 (342)
302 4a9v_A PHOX; hydrolase, beta-p 96.5 0.019 6.6E-07 64.7 13.4 70 442-516 474-553 (592)
303 4gqb_B Methylosome protein 50; 96.5 0.73 2.5E-05 49.1 25.9 237 409-701 89-332 (344)
304 2ynn_A Coatomer subunit beta'; 96.5 0.98 3.3E-05 46.8 36.5 270 417-771 29-302 (304)
305 1yr2_A Prolyl oligopeptidase; 96.5 0.23 7.9E-06 59.2 24.0 186 328-531 243-447 (741)
306 2ygq_A WIF-1, WNT inhibitory f 96.5 0.0026 8.9E-08 67.7 5.9 80 101-204 186-271 (324)
307 3ojy_B Complement component C8 96.4 0.0015 5.3E-08 74.3 4.2 35 94-132 67-102 (537)
308 3ow8_A WD repeat-containing pr 96.4 1.2 4.1E-05 46.6 36.4 268 413-769 48-319 (321)
309 3jrp_A Fusion protein of prote 96.4 0.69 2.4E-05 48.9 24.7 246 250-524 13-286 (379)
310 4a11_B DNA excision repair pro 96.3 1.5 5.2E-05 46.8 30.8 300 349-702 44-367 (408)
311 1nr0_A Actin interacting prote 96.3 2.4 8.1E-05 48.9 55.8 520 220-823 30-568 (611)
312 1z68_A Fibroblast activation p 96.2 0.054 1.8E-06 64.3 16.1 283 271-569 34-394 (719)
313 3iuj_A Prolyl endopeptidase; h 96.2 2.7 9.3E-05 49.4 30.6 233 308-567 88-358 (693)
314 2kl7_A Fibulin-4; secreted, ca 96.2 0.003 1E-07 50.7 3.2 38 132-169 4-44 (71)
315 3jrp_A Fusion protein of prote 96.1 0.96 3.3E-05 47.8 24.5 230 327-571 32-290 (379)
316 4a11_B DNA excision repair pro 96.1 1.7 5.9E-05 46.3 26.5 121 444-571 246-368 (408)
317 3iz6_a 40S ribosomal protein R 96.1 2 6.8E-05 46.1 31.3 291 249-567 67-374 (380)
318 2bkl_A Prolyl endopeptidase; m 96.0 0.81 2.8E-05 53.9 25.3 236 306-566 77-349 (695)
319 2bkl_A Prolyl endopeptidase; m 96.0 1.2 4.1E-05 52.4 26.8 234 273-531 94-357 (695)
320 3t5o_A Complement component C6 96.0 0.0025 8.4E-08 77.7 3.0 41 26-69 105-152 (913)
321 1nzi_A Complement C1S componen 95.9 0.0028 9.7E-08 60.0 2.5 40 132-171 118-158 (159)
322 3ei3_B DNA damage-binding prot 95.9 2.2 7.6E-05 45.4 32.7 196 249-476 74-281 (383)
323 3odt_A Protein DOA1; ubiquitin 95.9 1.8 6.1E-05 44.2 31.0 273 250-570 20-298 (313)
324 3mmy_A MRNA export factor; mRN 95.9 2 7E-05 44.8 30.3 121 442-573 38-165 (368)
325 1gl4_A Nidogen-1, entactin; im 95.9 0.0017 5.9E-08 66.3 0.8 42 132-175 6-49 (285)
326 1got_B GT-beta; complex (GTP-b 95.8 2.2 7.7E-05 44.8 32.5 275 249-561 56-336 (340)
327 3v9f_A Two-component system se 95.8 4.5 0.00015 48.2 45.6 117 444-570 363-480 (781)
328 2ynn_A Coatomer subunit beta'; 95.8 2 7E-05 44.3 37.3 277 443-811 13-293 (304)
329 1p22_A F-BOX/WD-repeat protein 95.8 2.1 7.3E-05 46.7 25.7 270 251-569 136-415 (435)
330 1k8k_C P40, ARP2/3 complex 41 95.7 2.5 8.6E-05 44.4 36.6 249 444-771 9-274 (372)
331 1nzi_A Complement C1S componen 95.7 0.0069 2.4E-07 57.2 4.1 51 158-213 106-158 (159)
332 4e54_B DNA damage-binding prot 95.6 1.9 6.6E-05 47.1 24.6 201 249-476 120-326 (435)
333 3frx_A Guanine nucleotide-bind 95.6 2.6 9E-05 43.8 31.9 204 351-572 20-231 (319)
334 3frx_A Guanine nucleotide-bind 95.5 2.8 9.5E-05 43.6 34.0 287 251-566 20-315 (319)
335 2gy5_A Angiopoietin-1 receptor 95.5 0.012 4.1E-07 64.9 5.7 93 101-213 204-320 (423)
336 3f1s_B Vitamin K-dependent pro 95.5 0.007 2.4E-07 63.2 3.5 41 592-633 2-43 (283)
337 3dw8_B Serine/threonine-protei 95.4 3.1 0.0001 45.2 25.4 148 413-572 189-377 (447)
338 3v7d_B Cell division control p 95.4 4 0.00014 44.7 32.8 276 265-570 134-423 (464)
339 3ei3_B DNA damage-binding prot 95.3 3.7 0.00013 43.6 36.7 208 442-702 72-284 (383)
340 1nr0_A Actin interacting prote 95.2 5.9 0.0002 45.5 51.4 285 251-570 21-315 (611)
341 4aow_A Guanine nucleotide-bind 95.1 3.5 0.00012 42.6 35.0 289 250-570 40-339 (340)
342 2xe4_A Oligopeptidase B; hydro 95.1 3.5 0.00012 48.9 26.2 218 328-566 141-398 (751)
343 4ery_A WD repeat-containing pr 95.1 3.6 0.00012 42.3 42.2 273 442-807 22-298 (312)
344 2pbi_B Guanine nucleotide-bind 95.0 4.3 0.00015 42.9 33.0 150 416-574 169-321 (354)
345 4e54_B DNA damage-binding prot 95.0 0.4 1.4E-05 52.8 16.2 206 351-574 122-333 (435)
346 4ery_A WD repeat-containing pr 94.9 3.9 0.00013 42.0 41.3 273 413-770 35-311 (312)
347 3f3f_A Nucleoporin SEH1; struc 94.8 3.9 0.00013 42.0 22.7 184 327-525 32-249 (351)
348 1tpg_A T-plasminogen activator 94.7 0.013 4.5E-07 49.5 2.5 51 112-174 30-90 (91)
349 3dwl_C Actin-related protein 2 94.7 0.51 1.7E-05 50.3 15.9 145 220-378 23-175 (377)
350 3fcs_B Integrin beta-3; beta p 94.7 0.043 1.5E-06 64.0 7.5 83 100-203 493-594 (690)
351 2kl7_A Fibulin-4; secreted, ca 94.7 0.023 8E-07 45.4 3.7 36 171-208 2-41 (71)
352 2vj2_A Jagged-1; signalling, p 94.7 0.0096 3.3E-07 56.9 1.6 52 102-161 105-163 (169)
353 3dm0_A Maltose-binding peripla 94.6 9 0.00031 44.7 27.9 149 413-572 484-636 (694)
354 3jro_A Fusion protein of prote 94.4 1.1 3.7E-05 53.4 19.4 251 250-525 11-285 (753)
355 2k2s_B Micronemal protein 6; m 94.3 0.0086 2.9E-07 46.2 0.3 39 132-175 12-54 (61)
356 2gy5_A Angiopoietin-1 receptor 94.2 0.043 1.5E-06 60.5 5.7 61 100-172 250-321 (423)
357 1edm_B Factor IX; epidermal gr 94.2 0.019 6.4E-07 39.9 1.8 28 139-170 9-38 (39)
358 4a2l_A BT_4663, two-component 93.8 14 0.00049 43.8 49.0 490 222-828 100-620 (795)
359 1hae_A Heregulin-alpha; growth 93.6 0.024 8.4E-07 44.1 1.8 40 130-175 5-52 (63)
360 2ovr_B FBW7, F-BOX/WD repeat p 93.6 9.7 0.00033 41.4 38.9 309 413-823 129-443 (445)
361 3u7u_G Neuregulin 1; signaling 93.5 0.036 1.2E-06 41.7 2.4 35 131-171 8-49 (55)
362 3jro_A Fusion protein of prote 93.5 12 0.0004 44.4 25.8 265 442-771 8-285 (753)
363 4aow_A Guanine nucleotide-bind 93.4 8 0.00027 39.8 33.0 205 351-571 41-249 (340)
364 4fbr_A Lectin, myxobacterial h 93.4 0.002 6.8E-08 65.5 -6.2 91 100-202 105-232 (267)
365 2xe4_A Oligopeptidase B; hydro 93.3 9.8 0.00033 45.1 24.8 177 329-523 202-398 (751)
366 3f3f_A Nucleoporin SEH1; struc 93.2 8.4 0.00029 39.4 30.9 122 441-570 9-145 (351)
367 3odt_A Protein DOA1; ubiquitin 93.1 8.2 0.00028 39.0 35.9 275 442-823 17-297 (313)
368 1tl2_A L10, protein (tachylect 92.9 5.9 0.0002 39.0 17.7 107 442-565 86-207 (236)
369 3dwl_C Actin-related protein 2 92.9 4.4 0.00015 42.8 19.1 95 421-524 75-176 (377)
370 2xzm_R RACK1; ribosome, transl 92.9 10 0.00035 39.5 31.9 231 265-526 41-286 (343)
371 1gl4_A Nidogen-1, entactin; im 92.3 0.045 1.5E-06 55.9 1.8 41 170-214 3-46 (285)
372 3fcs_B Integrin beta-3; beta p 92.1 0.12 4.2E-06 60.2 5.5 57 100-171 534-600 (690)
373 1kv9_A Type II quinohemoprotei 92.1 18 0.00061 42.1 24.3 54 500-555 464-518 (668)
374 1erj_A Transcriptional repress 91.9 15 0.00052 39.1 34.6 116 446-573 126-243 (393)
375 3iz6_a 40S ribosomal protein R 91.8 15 0.00051 39.0 32.8 297 440-824 63-377 (380)
376 4gga_A P55CDC, cell division c 91.7 16 0.00056 39.2 30.9 278 408-772 111-396 (420)
377 3q7m_A Lipoprotein YFGL, BAMB; 91.4 16 0.00055 38.5 33.7 135 412-565 239-375 (376)
378 1egf_A Epidermal growth factor 91.2 0.13 4.3E-06 38.4 2.9 28 140-171 13-44 (53)
379 2ad6_A Methanol dehydrogenase 91.2 17 0.00059 41.4 22.4 31 353-383 239-284 (571)
380 2pbi_B Guanine nucleotide-bind 91.2 17 0.00057 38.2 35.5 266 413-767 76-353 (354)
381 1a3p_A Epidermal growth factor 90.8 0.15 5E-06 36.5 2.8 27 140-170 10-40 (45)
382 1tl2_A L10, protein (tachylect 90.7 5.3 0.00018 39.3 14.5 96 413-523 5-114 (236)
383 3v7d_B Cell division control p 90.5 22 0.00076 38.5 34.7 243 494-806 163-409 (464)
384 3v9f_A Two-component system se 90.4 33 0.0011 40.5 48.3 399 328-828 137-574 (781)
385 1edm_B Factor IX; epidermal gr 90.4 0.17 5.9E-06 34.8 2.8 30 171-203 2-33 (39)
386 1kv9_A Type II quinohemoprotei 90.4 31 0.0011 40.0 29.3 76 497-575 384-495 (668)
387 3zwu_A Alkaline phosphatase PH 90.3 0.75 2.6E-05 52.6 9.5 67 442-513 474-550 (592)
388 3k26_A Polycomb protein EED; W 90.0 19 0.00066 37.1 35.1 131 438-574 13-153 (366)
389 2ad6_A Methanol dehydrogenase 89.8 31 0.0011 39.2 31.3 76 497-575 389-501 (571)
390 3fm0_A Protein CIAO1; WDR39,SG 89.8 21 0.00072 37.2 30.9 290 251-568 19-335 (345)
391 1n1i_A Merozoite surface prote 89.4 0.31 1.1E-05 41.2 4.0 66 144-213 23-95 (105)
392 3dm0_A Maltose-binding peripla 89.4 36 0.0012 39.4 35.5 150 412-570 394-552 (694)
393 4fbr_A Lectin, myxobacterial h 89.2 0.03 1E-06 56.9 -2.8 85 100-205 38-131 (267)
394 1g1s_A P-selectin; selectin, l 89.1 0.12 4.1E-06 48.7 1.5 33 140-176 126-160 (162)
395 3zwu_A Alkaline phosphatase PH 89.1 3.9 0.00013 46.7 14.3 135 667-810 382-552 (592)
396 3t5o_A Complement component C6 89.1 0.13 4.3E-06 62.7 2.0 26 2-29 129-154 (913)
397 1kb0_A Quinohemoprotein alcoho 88.5 42 0.0014 39.0 31.8 55 516-575 457-514 (677)
398 2pm7_B Protein transport prote 88.4 23 0.00079 35.9 24.0 225 327-565 30-282 (297)
399 3gre_A Serine/threonine-protei 88.1 31 0.0011 36.9 29.3 157 413-576 182-367 (437)
400 1kb0_A Quinohemoprotein alcoho 87.9 46 0.0016 38.7 31.9 57 497-555 480-537 (677)
401 3k6s_B Integrin beta-2; cell r 87.4 0.35 1.2E-05 56.2 4.2 84 100-204 482-587 (687)
402 3lrv_A PRE-mRNA-splicing facto 86.9 31 0.0011 35.7 25.0 160 350-525 127-292 (343)
403 1ob1_C Major merozoite surface 86.9 0.47 1.6E-05 39.9 3.5 56 144-203 17-83 (99)
404 4ggc_A P55CDC, cell division c 86.8 28 0.00096 35.0 31.6 73 669-770 241-314 (318)
405 2oaj_A Protein SNI1; WD40 repe 86.6 34 0.0012 41.3 21.6 203 350-571 19-245 (902)
406 2k2s_B Micronemal protein 6; m 86.6 0.24 8.2E-06 38.0 1.5 33 168-203 7-43 (61)
407 1w6s_A Methanol dehydrogenase 86.4 51 0.0017 37.6 26.1 18 445-462 394-411 (599)
408 1k36_A Epiregulin; EGF-like fo 86.0 0.31 1.1E-05 35.0 1.8 28 139-170 12-42 (46)
409 2pm7_B Protein transport prote 85.8 32 0.0011 34.8 24.8 242 251-522 12-282 (297)
410 3fm0_A Protein CIAO1; WDR39,SG 85.7 36 0.0012 35.3 32.4 146 413-567 28-180 (345)
411 2xzm_R RACK1; ribosome, transl 85.7 36 0.0012 35.2 34.2 108 413-530 39-154 (343)
412 3u7u_G Neuregulin 1; signaling 85.6 0.65 2.2E-05 34.8 3.4 36 171-213 7-49 (55)
413 3ca7_A Protein spitz; argos, E 85.4 0.11 3.8E-06 38.5 -0.9 40 152-203 3-42 (52)
414 4h5i_A Guanine nucleotide-exch 85.3 40 0.0014 35.4 21.6 199 351-566 136-341 (365)
415 1egf_A Epidermal growth factor 84.6 0.61 2.1E-05 34.6 2.9 37 171-213 2-44 (53)
416 1p22_A F-BOX/WD-repeat protein 84.3 48 0.0017 35.5 30.8 145 413-573 143-290 (435)
417 2oit_A Nucleoporin 214KDA; NH2 84.3 20 0.00067 39.1 16.4 112 412-531 104-229 (434)
418 4gga_A P55CDC, cell division c 83.7 50 0.0017 35.2 34.0 149 413-569 242-396 (420)
419 3gre_A Serine/threonine-protei 83.3 52 0.0018 35.1 31.9 208 348-576 63-300 (437)
420 3q7m_A Lipoprotein YFGL, BAMB; 83.1 49 0.0017 34.6 38.6 144 413-572 54-211 (376)
421 3bg1_A Protein SEC13 homolog; 82.1 47 0.0016 33.8 24.2 242 251-522 16-290 (316)
422 1nt0_A MAsp2, mannose-binding 82.0 0.48 1.6E-05 49.2 1.9 31 140-170 132-162 (286)
423 1erj_A Transcriptional repress 81.9 56 0.0019 34.5 36.4 142 413-565 219-386 (393)
424 2oit_A Nucleoporin 214KDA; NH2 81.8 18 0.0006 39.5 14.8 134 669-828 93-229 (434)
425 2hes_X YDR267CP; beta-propelle 81.6 51 0.0017 33.9 25.2 151 413-569 119-281 (330)
426 1flg_A Protein (quinoprotein e 81.5 75 0.0026 36.1 20.4 16 447-462 415-430 (582)
427 3dem_A Complement factor MAsp- 80.6 0.69 2.4E-05 47.7 2.5 32 139-170 132-163 (278)
428 1yiq_A Quinohemoprotein alcoho 79.1 1E+02 0.0035 35.8 25.3 54 500-555 481-535 (689)
429 2j04_A TAU60, YPL007P, hypothe 78.6 60 0.002 36.8 17.6 193 249-474 86-296 (588)
430 1sqj_A OXG-RCBH, oligoxylogluc 77.9 1.2E+02 0.004 35.9 25.9 219 298-531 16-275 (789)
431 3k6s_B Integrin beta-2; cell r 76.6 1.6 5.6E-05 50.6 4.2 83 101-204 436-548 (687)
432 4h5i_A Guanine nucleotide-exch 76.5 78 0.0027 33.1 28.2 75 669-772 270-344 (365)
433 1w6s_A Methanol dehydrogenase 76.1 1.1E+02 0.0039 34.7 21.4 29 544-573 480-508 (599)
434 1nql_B Epidermal growth factor 76.0 0.82 2.8E-05 33.9 1.0 23 144-170 19-43 (53)
435 1nt0_A MAsp2, mannose-binding 73.7 2.3 7.7E-05 44.0 4.1 33 180-214 132-164 (286)
436 2zux_A YESW protein; beta-prop 71.9 1.3E+02 0.0045 33.6 21.3 119 425-556 270-408 (591)
437 3vu4_A KMHSV2; beta-propeller 71.1 1E+02 0.0035 31.9 30.2 74 669-771 196-271 (355)
438 2j04_B YDR362CP, TAU91; beta p 69.9 80 0.0027 35.2 16.2 224 326-562 181-422 (524)
439 3dem_A Complement factor MAsp- 69.1 3.2 0.00011 42.5 4.0 34 179-214 132-165 (278)
440 1k36_A Epiregulin; EGF-like fo 69.1 3.1 0.00011 29.7 2.7 25 179-203 12-37 (46)
441 2zuy_A YESX protein; beta-prop 68.9 1.6E+02 0.0053 33.3 19.6 119 425-556 274-412 (620)
442 3a0f_A Xyloglucanase; beta-pro 68.6 1.9E+02 0.0063 34.0 21.6 220 298-531 22-290 (763)
443 1flg_A Protein (quinoprotein e 68.5 1.6E+02 0.0055 33.3 20.4 75 497-574 415-522 (582)
444 3ca7_A Protein spitz; argos, E 68.3 1.1 3.8E-05 33.0 0.2 23 144-170 21-47 (52)
445 1a3p_A Epidermal growth factor 67.6 4.2 0.00014 28.7 3.1 18 184-203 16-35 (45)
446 2p28_B Integrin beta-2; hybrid 67.4 4.5 0.00015 39.8 4.4 87 101-204 97-209 (217)
447 4ggc_A P55CDC, cell division c 66.3 1.1E+02 0.0037 30.4 34.5 146 413-566 162-313 (318)
448 1hae_A Heregulin-alpha; growth 65.0 4.1 0.00014 31.2 2.8 37 591-632 10-46 (63)
449 3cfw_A L-selectin; EGF, cell a 64.5 2.5 8.5E-05 39.4 1.8 34 139-176 125-160 (164)
450 3b7f_A Glycosyl hydrolase, BNR 61.9 1.6E+02 0.0055 30.9 26.5 288 222-532 24-379 (394)
451 4aqs_A Laminin subunit beta-1; 61.5 4.2 0.00014 46.0 3.3 24 107-134 453-476 (525)
452 3zyj_B Netrin-G1; cell adhesio 60.9 1.8 6E-05 47.0 0.0 35 139-181 371-407 (426)
453 1sqj_A OXG-RCBH, oligoxylogluc 60.5 2.6E+02 0.0089 32.9 22.0 76 446-525 686-764 (789)
454 3dw8_B Serine/threonine-protei 59.3 1.8E+02 0.0061 30.6 32.5 90 670-776 287-378 (447)
455 1q4g_A Prostaglandin G/H synth 59.0 3.4 0.00012 46.8 2.0 34 132-171 3-40 (553)
456 1yiq_A Quinohemoprotein alcoho 58.7 2.6E+02 0.0088 32.3 28.2 56 516-575 455-512 (689)
457 3sbq_A Nitrous-oxide reductase 53.7 2.8E+02 0.0096 31.2 20.6 73 494-566 323-406 (638)
458 3vu4_A KMHSV2; beta-propeller 51.4 2.2E+02 0.0075 29.2 30.8 61 413-476 207-270 (355)
459 3bg1_A Protein SEC13 homolog; 50.8 2.1E+02 0.0071 28.8 26.9 80 736-825 211-298 (316)
460 4aqt_A Laminin subunit gamma-1 50.2 7.1 0.00024 41.8 2.5 35 51-87 256-290 (375)
461 2j04_B YDR362CP, TAU91; beta p 47.9 3.2E+02 0.011 30.2 25.3 147 414-570 226-388 (524)
462 2zuy_A YESX protein; beta-prop 47.4 3.5E+02 0.012 30.5 16.8 81 422-513 329-412 (620)
463 3ltf_D Protein spitz; receptor 47.2 4.9 0.00017 30.3 0.5 20 148-171 29-48 (58)
464 3ott_A Two-component system se 46.6 4E+02 0.014 30.8 19.2 173 363-570 394-588 (758)
465 3lrv_A PRE-mRNA-splicing facto 46.4 2.5E+02 0.0085 28.4 22.4 114 444-569 126-245 (343)
466 2j04_A TAU60, YPL007P, hypothe 44.7 3.8E+02 0.013 30.2 22.5 115 445-570 131-256 (588)
467 2cn3_A Xyloglucanase, beta-1,4 43.6 4.4E+02 0.015 30.5 24.3 261 250-526 24-338 (737)
468 1nql_B Epidermal growth factor 43.2 14 0.00047 27.2 2.4 18 191-212 26-43 (53)
469 2cn3_A Xyloglucanase, beta-1,4 43.2 4.5E+02 0.015 30.5 20.2 196 350-554 24-260 (737)
470 3nt1_A Prostaglandin-endoperox 41.9 8.8 0.0003 43.6 1.7 34 132-171 2-39 (587)
471 2uvk_A YJHT; unknown function, 41.8 3E+02 0.01 28.1 21.1 125 423-555 168-323 (357)
472 4aqs_A Laminin subunit beta-1; 40.6 31 0.001 38.8 6.0 52 144-203 410-469 (525)
473 1g1s_A P-selectin; selectin, l 39.9 19 0.00064 33.1 3.4 25 184-214 132-156 (162)
474 2xbg_A YCF48-like protein; pho 38.8 3.3E+02 0.011 27.7 26.1 69 445-524 164-233 (327)
475 1n1i_A Merozoite surface prote 38.2 15 0.00051 31.0 2.1 40 593-632 51-94 (105)
476 1ob1_C Major merozoite surface 38.2 11 0.00036 31.7 1.2 41 121-161 29-83 (99)
477 2hes_X YDR267CP; beta-propelle 34.2 3.7E+02 0.013 27.0 32.2 145 415-568 26-184 (330)
478 4aqb_A Mannan-binding lectin s 32.3 21 0.00071 37.9 2.7 35 137-171 130-164 (361)
479 2fd6_A Urokinase-type plasmino 31.0 22 0.00075 31.2 2.1 57 101-172 2-64 (122)
480 1k3i_A Galactose oxidase precu 29.7 6.5E+02 0.022 28.4 28.8 297 231-555 168-528 (656)
481 2ygo_A WIF-1, WNT inhibitory f 29.7 31 0.0011 32.6 3.0 28 140-171 150-180 (188)
482 1b9w_A Protein (merozoite surf 28.7 30 0.001 28.4 2.4 35 589-623 43-79 (95)
483 1iox_A Betacellulin; EGF-like 28.5 29 0.001 25.1 2.1 21 147-171 25-45 (50)
484 3e50_C Protransforming growth 28.3 29 0.00098 25.2 2.0 19 149-171 27-45 (50)
485 2zux_A YESW protein; beta-prop 27.5 6.9E+02 0.024 28.0 15.8 81 422-513 325-408 (591)
486 1g1t_A E-selectin; EGF, adhesi 27.4 18 0.0006 33.0 0.9 27 140-170 126-154 (157)
487 2dtg_E Insulin receptor; IR ec 26.5 66 0.0023 38.7 6.1 32 150-186 280-313 (897)
488 1q4g_A Prostaglandin G/H synth 25.6 30 0.001 39.0 2.6 24 184-213 15-40 (553)
489 2dtg_E Insulin receptor; IR ec 25.3 79 0.0027 38.0 6.5 63 150-214 233-304 (897)
490 3a0f_A Xyloglucanase; beta-pro 25.1 8.5E+02 0.029 28.2 18.6 211 328-559 519-754 (763)
491 1xdt_R Hbegf, heparin-binding 24.4 29 0.00098 27.9 1.5 19 148-170 58-76 (79)
492 4hvt_A Ritya.17583.B, post-pro 24.2 8.6E+02 0.029 28.0 19.4 117 409-532 296-436 (711)
493 3ssb_I IMPI alpha, inducible m 23.0 40 0.0014 21.9 1.7 22 153-175 6-27 (32)
494 2zwa_A Leucine carboxyl methyl 22.2 9.1E+02 0.031 27.5 17.3 141 412-555 451-614 (695)
495 2rnl_A Amphiregulin; AR, color 21.8 39 0.0013 24.4 1.6 15 147-161 29-43 (50)
496 3nt1_A Prostaglandin-endoperox 21.8 40 0.0014 38.2 2.6 34 173-213 2-39 (587)
497 2ygo_A WIF-1, WNT inhibitory f 21.5 44 0.0015 31.6 2.4 25 101-131 154-178 (188)
498 2fd6_A Urokinase-type plasmino 21.1 46 0.0016 29.1 2.3 24 144-171 8-34 (122)
499 3asi_A Neurexin-1-alpha; beta- 20.5 44 0.0015 36.0 2.6 29 139-171 191-222 (410)
500 4gq1_A NUP37; propeller, trans 20.0 7.2E+02 0.025 25.5 24.3 106 413-526 101-219 (393)
No 1
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=3.6e-83 Score=767.17 Aligned_cols=505 Identities=36% Similarity=0.771 Sum_probs=375.4
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCC--------CCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc----
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQ--------DRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC---- 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~--------~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C---- 69 (841)
+|||..|+|||+.||.|||||.+++|. ...|...+|+|. +++||+..|+|||..||. |+|||.+|
T Consensus 156 ~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~--dgsDE~~C~~~~ 232 (791)
T 3m0c_C 156 TCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCL-SGECIHSSWRCDGGPDCK--DKSDEENCAVAT 232 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCccccc-CCceeccccccCCCCCCC--CCCCCCCccccc
Confidence 599999999999999999999877783 357999999998 889999999999999999 99999887
Q ss_pred ----------------------ccCCCCCCCCCCccCCCCCCCCCCCC-CCCCcccCCCCCeEecCCCCCCCCCCCCCCC
Q psy14257 70 ----------------------VNDCTDWSDETNCTHSGNRTISAPAC-EPHEFDCQDVLRTCIPKALVCDGEPACFNGE 126 (841)
Q Consensus 70 ----------------------~~dC~~~~de~~C~~c~~~~~c~~~C-~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~ 126 (841)
..||.|++||.+|.. ...| .+.+|+|.+ +.||+...+|++..+|.+|+
T Consensus 233 C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~-------~~~C~~~~~~~C~~--G~Ci~~~~~Cd~~~dC~dgs 303 (791)
T 3m0c_C 233 CRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVN-------VTLCEGPNKFKCHS--GECITLDKVCNMARDCRDWS 303 (791)
T ss_dssp -----------------------------------------------CCSTTCCCCTT--SCCCCSSCCSCSSCCSSSSC
T ss_pred cCCCcceecCCceEecceecCChhccccccccCcccc-------cccccCCCccccCC--CcccccccccCCcccccccc
Confidence 347888888888764 2335 467899998 89999999999999999999
Q ss_pred CCcc--c--ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEeecCCe
Q psy14257 127 DEMF--C--DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGY 202 (841)
Q Consensus 127 de~~--C--~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~ 202 (841)
||.. | +||...++.|++.|.+++++|.|.|++||.+ .+++.|++++||..++.|++.|.|+ .|+|+|.|.+||
T Consensus 304 De~~~~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~~~~~C~~~C~n~--~gsy~C~C~~Gy 380 (791)
T 3m0c_C 304 DEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNL--EGGYKCQCEEGF 380 (791)
T ss_dssp SCCCTTBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCSSSSSCTTTCCBC--SSCBCCCCCSSE
T ss_pred CccccccccccccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccCCCCCCCCeeecC--CCCceeecCCCC
Confidence 9965 7 7898777899999999999999999999998 6899999999998778999999999 999999999999
Q ss_pred eecCCCCceEeCCCCCCCCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecC
Q psy14257 203 ELEPDMFTCKSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIG 282 (841)
Q Consensus 203 ~l~~d~~~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~ 282 (841)
.+..++++|+++ ...++|++++.++|++++++...+..++.+++.++||+|+...++ |||+|...++|+++++++
T Consensus 381 ~l~~~~~~C~~~---~~~p~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~--lY~sD~~~~~I~~~~l~g 455 (791)
T 3m0c_C 381 QLDPHTKACKAV---GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNR--IYWSDLSQRMICSTQLDR 455 (791)
T ss_dssp ECCSSCCCCEET---TSCCEEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTE--EEEEETTTTEEEEEEC--
T ss_pred EeCCCCceeeec---ccccccccccccceeEeeccCCcceeeecCCCceEEEeecccCCe--eEEeeccceeEEEEeccC
Confidence 999999999998 467899999999999999999888889999999999999997766 999999999999999876
Q ss_pred Ccc-cceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCC
Q psy14257 283 NSL-SNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD 361 (841)
Q Consensus 283 ~~~-~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~ 361 (841)
... ....+++..++..|.||||||.+
T Consensus 456 ~~~~~~~~~vi~~~l~~P~GLAvD~~~----------------------------------------------------- 482 (791)
T 3m0c_C 456 AHGVSSYDTVISRDIQAPDGLAVDWIH----------------------------------------------------- 482 (791)
T ss_dssp ------CEEEECSSCSCCCEEEEETTT-----------------------------------------------------
T ss_pred CCCCcceeEEEecCCCCcceeeeeecC-----------------------------------------------------
Confidence 321 13445555567777777777654
Q ss_pred EEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecC
Q psy14257 362 ILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAG 441 (841)
Q Consensus 362 ~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~ 441 (841)
++|||+|...++|++++++|+.+++++..
T Consensus 483 ---------------------------------------------------~~LY~tD~~~~~I~v~~ldG~~~~~l~~~ 511 (791)
T 3m0c_C 483 ---------------------------------------------------SNIYWTDSVLGTVSVADTKGVKRKTLFRE 511 (791)
T ss_dssp ---------------------------------------------------TEEEEEETTTTEEEEEETTSSSEEEEEEC
T ss_pred ---------------------------------------------------CcEEEEecCCCeEEEEeCCCCeEEEEEeC
Confidence 77888888888999999999999888888
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTV 521 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~ 521 (841)
.+..|+||||||.+|+||||||+. .++|+|++|||+.+++++. ..+.+|+|||||+.+++|||+|.+.++|+++
T Consensus 512 ~l~~P~gIaVDp~~g~LYwtD~g~-~~~I~~~~~dG~~~~~lv~-----~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~ 585 (791)
T 3m0c_C 512 NGSKPRAIVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSI 585 (791)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCCEEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCCcceEEEecCCCCEEEecCCC-CCeEEEEecCCCceEEEEe-----CCCCCceEEEEecCCCeEEEEeCCCCcEEEE
Confidence 899999999999999999999983 4899999999999999987 6889999999999999999999999999999
Q ss_pred EcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCC
Q psy14257 522 TYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCE 596 (841)
Q Consensus 522 ~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~ 596 (841)
+++|..+++++.....+.+|+||++++++|||+||.+++|++++|.+|+.+.++...+..|++ +| +||.+.|||.
T Consensus 586 d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp~~~N~C~ 665 (791)
T 3m0c_C 586 DVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCE 665 (791)
T ss_dssp ETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCCTTT
T ss_pred ecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCCCCCCccc
Confidence 999999999987766789999999999999999999999999999999999999888889988 66 8999999999
Q ss_pred C---CCCCCccccccCCC-----CceeeeCCCCceeecCCCcccccCc
Q psy14257 597 M---NNGNCSHLCLIGMN-----GTYKCQCPHVMKLMSDNKTCQVADS 636 (841)
Q Consensus 597 ~---~ng~Cs~lC~~~~~-----~~~~C~Cp~g~~l~~d~~tC~~~~~ 636 (841)
. +||+|+||||+.+. .+|+|+||+||.|.+|+++|...++
T Consensus 666 ~~~~~ng~CshlCl~~p~~~~~~~~~~C~Cp~g~~L~~d~~tC~~~~~ 713 (791)
T 3m0c_C 666 RTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTEAE 713 (791)
T ss_dssp SSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEEC---
T ss_pred ccCCCCcCcCeeecCCCCcCCCCCCceeECCCCCEECCCCCcCCCCCC
Confidence 7 79999999999874 2599999999999999999985443
No 2
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=3e-80 Score=740.33 Aligned_cols=508 Identities=35% Similarity=0.751 Sum_probs=422.7
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc------------
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC------------ 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C------------ 69 (841)
+|||..|+|||..||.|||||. +|....|.+++|+|. +++||+..|+|||..||. |||||.+|
T Consensus 60 ~Ci~~~~~Cdg~~dC~dgsDE~--~C~~~~C~~~~f~C~-~g~Ci~~~~~Cdg~~dC~--dgsDE~~C~~~~C~~~~f~C 134 (699)
T 1n7d_A 60 RCIPQFWRCDGQVDCDNGSDEQ--GCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDCL--DGSDEASCPVLTCGPASFQC 134 (699)
T ss_dssp CCCCSSSTTSSSCCC-CCCTTT--SCSSCCCCSSCCCSS-CC----CCCTTCSSCCSS--SSCSSSSCCCCCCCSSCCCC
T ss_pred ceeCcceecCCcccCCCCcccC--cccccccccCcEEcC-CCCEecHHHcCCCcCcCC--CCCccCCcCccccCccccCC
Confidence 5899999999999999999998 888788988899997 788999999999999999 89999776
Q ss_pred --------------ccCCCCCCCC--CCcc----------CCCCCCC-CC----------------------------CC
Q psy14257 70 --------------VNDCTDWSDE--TNCT----------HSGNRTI-SA----------------------------PA 94 (841)
Q Consensus 70 --------------~~dC~~~~de--~~C~----------~c~~~~~-c~----------------------------~~ 94 (841)
..||.|++|| .+|. .|.+.+| |. ..
T Consensus 135 ~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~ 214 (699)
T 1n7d_A 135 NSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSGECIHSSWRCDGGPDCKDKSDEENCAVAT 214 (699)
T ss_dssp SSSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSSCCCSTTCTTSSSCCSTTSCSSCSCCCCC
T ss_pred CCCcccchhcccCCCCcCCCCcccccccCCCcccccCCCCCCCCcceecCCCceEechhccCCCCCCCCCcccccCCCcc
Confidence 4689999998 7774 2554444 31 24
Q ss_pred CCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc-------------------------------------------
Q psy14257 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC------------------------------------------- 131 (841)
Q Consensus 95 C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C------------------------------------------- 131 (841)
|.+.+|.|.+ +.||+.+++|||..+|.+|+||..|
T Consensus 215 C~~~~f~C~~--g~Ci~~~~~Cdg~~dC~dgsde~~C~~~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C 292 (699)
T 1n7d_A 215 CRPDEFQCSD--GNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC 292 (699)
T ss_dssp CCSSEEESSS--SCEEETTCCSSSCCCSSSSCSSSSTTCCCCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSC
T ss_pred cCCCcEecCC--CceeeeecccCCCCCCCCCCccCCCCCCCcccCCCceecCCCcEeCCcccccccceecCccccccccc
Confidence 6667788886 7888888888888888888887544
Q ss_pred --ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEeecCCeeecCCCC
Q psy14257 132 --DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMF 209 (841)
Q Consensus 132 --~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~ 209 (841)
+||...++.|++.|.+++++|.|.|++||.+ .+++.|++++||...+.|++.|.|+ .++|+|.|++||.+..+++
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~--~g~y~C~C~~G~~~~~~~~ 369 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNL--EGGYKCQCEEGFQLDPHTK 369 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCSSSSSCTTTCCBC--SSCBCCCCCSSCBCCSSCC
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccCCCCccccccccC--CCCeeeeeecccccCCCCC
Confidence 1233233457789999999999999999998 7899999999998778899999999 9999999999999999999
Q ss_pred ceEeCCCCCCCCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcc-cce
Q psy14257 210 TCKSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSL-SNI 288 (841)
Q Consensus 210 ~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~-~~~ 288 (841)
+|+++ ...++|++++.+.|+++++++..+..++..++++++|+|+...+. |||+|...++|+++++++... ...
T Consensus 370 ~C~~~---~~~~~ll~~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~--Ly~sD~~~~~I~~~~~~g~~~~~~~ 444 (699)
T 1n7d_A 370 ACKAV---GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNR--IYWSDLSQRMICSTQLDRAHGVSSY 444 (699)
T ss_dssp CCBCC---SSCCCBCCCCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTE--EEECCTTTTSBEEEESCCCCC-CCC
T ss_pred ccccc---ccceeEEecCccceEEEeCCCCcceeeeccCcceEEEccccccCe--EEEEecCCCeEEEEecCCCCCCcce
Confidence 99987 567899999999999999999888888888889999999987766 999999999999998875110 012
Q ss_pred EEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeC
Q psy14257 289 DVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDS 368 (841)
Q Consensus 289 ~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~ 368 (841)
..++..++..|.||||||.+
T Consensus 445 ~~~i~~~~~~P~glavD~~~------------------------------------------------------------ 464 (699)
T 1n7d_A 445 DTVISRDIQAPDGLAVDWIH------------------------------------------------------------ 464 (699)
T ss_dssp CCBCCSCC--CCCEECCCSS------------------------------------------------------------
T ss_pred EEEEeCCCCCcceEEEEeeC------------------------------------------------------------
Confidence 22233344445555554433
Q ss_pred CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCcee
Q psy14257 369 HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRA 448 (841)
Q Consensus 369 ~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~g 448 (841)
++|||+|...++|.+++++|..+++++...+..|++
T Consensus 465 --------------------------------------------g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~g 500 (699)
T 1n7d_A 465 --------------------------------------------SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRA 500 (699)
T ss_dssp --------------------------------------------SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCC
T ss_pred --------------------------------------------CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcce
Confidence 788888888889999999999888888878899999
Q ss_pred EEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee
Q psy14257 449 IALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH 528 (841)
Q Consensus 449 iavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~ 528 (841)
|||||..|+|||||++. .++|+|++++|+.+++++. ..+.+|+|||||+.+++|||+|...++|++++++|..+
T Consensus 501 iavDp~~g~ly~td~~~-~~~I~~~~~dG~~~~~l~~-----~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~ 574 (699)
T 1n7d_A 501 IVVDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 574 (699)
T ss_dssp EECCSSSSCCEECCCSS-SCCEEBCCSSSCCCCEESC-----SSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC
T ss_pred EEEccCCCcEEEcccCC-CCeEEEEeCCCCCeeEEEe-----CCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce
Confidence 99999999999999872 4899999999999888876 57899999999999999999999999999999999999
Q ss_pred EEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCC---CC
Q psy14257 529 HVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMN---NG 600 (841)
Q Consensus 529 ~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~---ng 600 (841)
++++.....+.+|+||++++++|||+||.+++|.++++.+|+..++|...+..|++ +| +||.+.|||..+ ||
T Consensus 575 ~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~~~n~C~~~~~~ng 654 (699)
T 1n7d_A 575 KTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGVNWCERTTLSNG 654 (699)
T ss_dssp EEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCCSCCSSCSSSCSSC
T ss_pred EEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCCCCCCccccCCCCC
Confidence 98887555688999999999999999999999999999999988888777778888 55 889999999997 99
Q ss_pred CCccccccCCC-----CceeeeCCCCceeecCCCccccc
Q psy14257 601 NCSHLCLIGMN-----GTYKCQCPHVMKLMSDNKTCQVA 634 (841)
Q Consensus 601 ~Cs~lC~~~~~-----~~~~C~Cp~g~~l~~d~~tC~~~ 634 (841)
+|+||||+++. .+|+|+||+||.|.+|+++|+..
T Consensus 655 ~Cs~lCl~~p~~~~~~~~~~C~Cp~g~~l~~d~~~C~~~ 693 (699)
T 1n7d_A 655 GCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCLTE 693 (699)
T ss_dssp SCTTCCBCCCCCTTCSCSCBCCCCSSCEECSSTTCEECC
T ss_pred CCCcccCcCcccCCCCCCcEEECcCCCEECCCCCccCCC
Confidence 99999998752 35999999999999999999843
No 3
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=7.2e-75 Score=683.50 Aligned_cols=463 Identities=33% Similarity=0.636 Sum_probs=407.2
Q ss_pred CCCCeEEeccCccccccccccccEEEE--eccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCC
Q psy14257 218 DSSPFVIFSNRHELRGVDLRTFNVIAL--ISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTG 295 (841)
Q Consensus 218 ~~~p~ll~s~~~~I~~~~~~~~~~~~l--~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 295 (841)
.++++|+|+++++|+++++++.....+ +.++++++||||++.+++ |||+|...++|+|++++|+ ..++++..+
T Consensus 4 ~p~~~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~--lywtD~~~~~I~r~~~~g~---~~~~v~~~g 78 (628)
T 4a0p_A 4 VPEAFLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNR--IYWTDISLKTISRAFMNGS---ALEHVVEFG 78 (628)
T ss_dssp -CCCEEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTE--EEEEETTTTEEEEEETTSC---SCEEEECSS
T ss_pred CCCcEEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCE--EEEEECCCCeEEEEECCCC---CcEEEEeCC
Confidence 568999999999999999998655444 346789999999998777 9999999999999998764 456677777
Q ss_pred CCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEE
Q psy14257 296 LSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 375 (841)
Q Consensus 296 l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~ 375 (841)
+..|.||||||.+
T Consensus 79 ~~~P~GlAvD~~~------------------------------------------------------------------- 91 (628)
T 4a0p_A 79 LDYPEGMAVDWLG------------------------------------------------------------------- 91 (628)
T ss_dssp CSCCCEEEEETTT-------------------------------------------------------------------
T ss_pred CCCcceEEEEeCC-------------------------------------------------------------------
Confidence 7788888888765
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCC
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRF 455 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~ 455 (841)
++|||+|...++|++++++|+.+++++...+..|++|||||.+
T Consensus 92 -------------------------------------~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~ 134 (628)
T 4a0p_A 92 -------------------------------------KNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAE 134 (628)
T ss_dssp -------------------------------------TEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTT
T ss_pred -------------------------------------CEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCC
Confidence 7888888888899999999988888887889999999999999
Q ss_pred CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC
Q psy14257 456 GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH 535 (841)
Q Consensus 456 g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~ 535 (841)
|+||||||+. .++|+|++|||+.+++++. .+.+|+||+||+.+++|||+|...++|++++++|+.++++..
T Consensus 135 G~lY~tD~g~-~~~I~r~~~dG~~~~~l~~------~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~-- 205 (628)
T 4a0p_A 135 GFMYWTEWGG-KPKIDRAAMDGSERTTLVP------NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIAD-- 205 (628)
T ss_dssp TEEEEEECSS-SCEEEEEETTSCSCEEEEC------SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEE--
T ss_pred CeEEEeCCCC-CCEEEEEeCCCCceEEEEC------CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeec--
Confidence 9999999973 6899999999999998874 689999999999999999999999999999999999876654
Q ss_pred CCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCCCCCCccccccCC
Q psy14257 536 DSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMNNGNCSHLCLIGM 610 (841)
Q Consensus 536 ~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~ng~Cs~lC~~~~ 610 (841)
.+.+|+||++++++||||||.+++|.+++|.+|+..+++...+..|++ +| +|| +.|+|..+||+|+|+|++.+
T Consensus 206 -~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~-~~n~C~~~ng~C~~~C~~~~ 283 (628)
T 4a0p_A 206 -DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQS-GWNECASSNGHCSHLCLAVP 283 (628)
T ss_dssp -CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSC-CCCTTTTTGGGCSSEEEEET
T ss_pred -cCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccc-cceEeccCCCCcchhhhcCC
Confidence 378999999999999999999999999999999999999888888988 66 565 68999999999999999998
Q ss_pred CCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCC
Q psy14257 611 NGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEY 690 (841)
Q Consensus 611 ~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~ 690 (841)
.++|+|.||.||.|.+|+++|. ++.+||+++....|+++.++.... ....+++.++.++.+|+||+.+++|||+|...
T Consensus 284 ~~~~~C~C~~g~~l~~d~~~C~-~~~~~Ll~s~~~~i~~i~l~~~~~-~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~ 361 (628)
T 4a0p_A 284 VGGFVCGCPAHYSLNADNRTCS-APTTFLLFSQKSAINRMVIDEQQS-PDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQ 361 (628)
T ss_dssp TTEEEEECSTTCEECTTSSCEE-CCSSEEEEEETTEEEEECCCTTCC-CCEECCCTTCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCCeeEEcCCCcEecccCCcCc-cccceeeeeccceEEEEecccccC-ceEEEEehhcCCceEEEEecCCCeEEEEecCc
Confidence 7789999999999999999999 778999999999999999975432 23456788899999999999999999999999
Q ss_pred CeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeC------CCCCcceeEEeecCCcEEEEecCCCCCeE
Q psy14257 691 NEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDA------GISHPSGLAIDWIAQNMFIAVSSPTQSKI 764 (841)
Q Consensus 691 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~------~~~~p~glAvD~~~~~LYw~~~~~~~~~I 764 (841)
++|+|++++|+. .++++.. .+..|.||||||++++|||| |..+++|
T Consensus 362 ~~I~r~~~~g~~--------------------------~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~t--d~~~~~I 413 (628)
T 4a0p_A 362 NMIRKAQEDGSQ--------------------------GFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWT--CEATNVI 413 (628)
T ss_dssp TEEEEEETTSCS--------------------------CEEEEC--------CCCEEEEEEETTTTEEEEE--ETTTTEE
T ss_pred ceEEEEEcCCCC--------------------------ceEEEEcccccccccCCcceEEeeccCCeEEEE--cCCCCEE
Confidence 999999999987 3344433 57789999999999999999 5688999
Q ss_pred EEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEEecCC-CCce
Q psy14257 765 VVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK-KYPA 836 (841)
Q Consensus 765 ~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l~~~~-~~~~ 836 (841)
++++++|+.+++++.. .+.+|++|||||.+|+|||+||+.+.++|+|++|||+++++|+++. ..|.
T Consensus 414 ~v~~~~G~~~~~l~~~------~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~ 480 (628)
T 4a0p_A 414 NVTRLDGRSVGVVLKG------EQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPI 480 (628)
T ss_dssp EEEETTSCEEEEEEEC------TTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEE
T ss_pred EEEECCCCeEEEEEeC------CCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCcc
Confidence 9999999999888863 1899999999999999999999986458999999999999999865 4554
No 4
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=3.6e-75 Score=685.62 Aligned_cols=467 Identities=35% Similarity=0.762 Sum_probs=403.9
Q ss_pred CCCeEEeccCccccccccccc--cEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCC
Q psy14257 219 SSPFVIFSNRHELRGVDLRTF--NVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGL 296 (841)
Q Consensus 219 ~~p~ll~s~~~~I~~~~~~~~--~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l 296 (841)
..|+|+++++++|+++++++. ++..+++++++++||||++.++. |||+|...++|+|++++|.. ..++++..++
T Consensus 8 ~~~~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~--ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~ 83 (619)
T 3s94_A 8 HAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGL--IYWSDVSEEAIKRTEFNKTE--SVQNVVVSGL 83 (619)
T ss_dssp --CCEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTE--EEEEETTTTEEEEEEC-------CEEEECSSC
T ss_pred cCceEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCE--EEEEECCCCeEEEEEccCCC--ceEEEEeCCC
Confidence 478999999999999999875 46667788999999999998777 99999999999999988653 3456777788
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 376 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~ 376 (841)
..|+|||+||.+
T Consensus 84 ~~P~GlAvD~~~-------------------------------------------------------------------- 95 (619)
T 3s94_A 84 LSPDGLACDWLG-------------------------------------------------------------------- 95 (619)
T ss_dssp SCEEEEEEETTT--------------------------------------------------------------------
T ss_pred CCcCeEEEEecC--------------------------------------------------------------------
Confidence 888888888765
Q ss_pred EecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCC
Q psy14257 377 RVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFG 456 (841)
Q Consensus 377 ~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g 456 (841)
++|||+|...++|.+++++|+.+++++...+..|++|||||.+|
T Consensus 96 ------------------------------------~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g 139 (619)
T 3s94_A 96 ------------------------------------EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG 139 (619)
T ss_dssp ------------------------------------TEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTT
T ss_pred ------------------------------------CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCC
Confidence 78888888888999999999988888878899999999999999
Q ss_pred eEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC
Q psy14257 457 LLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD 536 (841)
Q Consensus 457 ~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~ 536 (841)
+||||||+. .++|+|++|||+.+++++. ..+.+|+|||+|+.+++|||+|.+.++|++++++|..++++...
T Consensus 140 ~ly~tD~g~-~~~I~r~~~dG~~~~~l~~-----~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~-- 211 (619)
T 3s94_A 140 FMYWTDWGE-VPKIERAGMDGSSRFIIIN-----SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG-- 211 (619)
T ss_dssp EEEEEECSS-SCEEEEEETTSCSCEEEEC-----SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC-------
T ss_pred eEEEeccCC-CCEEEEEECCCCceEEEEe-----CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeC--
Confidence 999999983 6899999999999999987 67899999999999999999999999999999999999888764
Q ss_pred CCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCCCCCCccccccCCC
Q psy14257 537 SLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMNNGNCSHLCLIGMN 611 (841)
Q Consensus 537 ~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~ng~Cs~lC~~~~~ 611 (841)
.+.+|+||++++++||||||.+++|.+++|.+|+..+++...+..|++ +| +||.+.|||..+||+|||+|++++.
T Consensus 212 ~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~ 291 (619)
T 3s94_A 212 SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPV 291 (619)
T ss_dssp ----CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSS
T ss_pred CCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCC
Confidence 378999999999999999999999999999999998888887888998 56 7999999999999999999999886
Q ss_pred C-ceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCC
Q psy14257 612 G-TYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEY 690 (841)
Q Consensus 612 ~-~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~ 690 (841)
. +|+|+||.||.|.+|+++|...+++||+++....|+++.|+.+.... ..+++.++.++.+|+||+.+++|||+|...
T Consensus 292 ~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~-~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~ 370 (619)
T 3s94_A 292 KPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTD-IVLQLEDIRHAIAIDYDPVEGYIYWTDDEV 370 (619)
T ss_dssp TTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCC-EECCCSCCSSEEEEEEETTTTEEEEEETTT
T ss_pred CCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccce-eEEeccccCccEEEEEEcCCCeEEEEeCCC
Confidence 3 69999999999999999999667999999999999999998765543 356788899999999999999999999999
Q ss_pred CeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecC
Q psy14257 691 NEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLE 770 (841)
Q Consensus 691 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~ 770 (841)
++|+|++++|+. .++++..++..|.||||||.+++|||| |..+++|++++++
T Consensus 371 ~~I~r~~~~g~~--------------------------~~~v~~~~~~~p~GlAvD~~~~~lY~t--D~~~~~I~v~~~~ 422 (619)
T 3s94_A 371 RAIRRSFIDGSG--------------------------SQFVVTAQIAHPDGIAVDWVARNLYWT--DTGTDRIEVTRLN 422 (619)
T ss_dssp TEEEEEETTSCS--------------------------CEEEECSSCSCCCEEEEETTTTEEEEE--ETTTTEEEEEETT
T ss_pred CeEEEEEcCCCc--------------------------cEEEEECCCCCcCceEEecccCcEEEE--eCCCCcEEEEeCC
Confidence 999999999987 667777889999999999999999999 5688999999999
Q ss_pred CcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEEecCC-CCcee
Q psy14257 771 GEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQK-KYPAV 837 (841)
Q Consensus 771 g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l~~~~-~~~~~ 837 (841)
|+.+++++.. .+.+|++|||||.+|+|||+||+.. ++|+|++|||+++++|+... ..|.-
T Consensus 423 G~~~~~l~~~------~l~~P~~iavdp~~G~ly~tD~g~~-~~I~r~~~dG~~~~~l~~~~l~~P~G 483 (619)
T 3s94_A 423 GTMRKILISE------DLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSDRVVLVNTSLGWPNG 483 (619)
T ss_dssp SCSCEEEECT------TCCSEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred CCeEEEEEEC------CCCCeeeEEEEcCCCcEEEecCCCC-CEEEEEccCCCccEEEEeCCCCCCee
Confidence 9999998863 1899999999999999999999874 79999999999999999764 55543
No 5
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=3.8e-64 Score=563.83 Aligned_cols=383 Identities=34% Similarity=0.713 Sum_probs=342.5
Q ss_pred ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEeecCCeeecCCCCce
Q psy14257 132 DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C 211 (841)
+||...+..|++.|.|++++|.|.|++||.+ .+++.|++++||..++.|++.|.|+ .|+|.|.|.+||.+..++++|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~~~~C~~~C~n~--~g~~~C~C~~g~~~~~~~~~C 77 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQDPDTCSQLCVNL--EGGYKCQCEEGFQLDPHTKAC 77 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCSTTSSCSSCCBCC--SSSCBCCCCTTCCCCTTTSSC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhccCCCCCccCCC--ccceeeeccccccccccccce
Confidence 5787667789999999999999999999998 6899999999998778999999999 999999999999999999999
Q ss_pred EeCCCCCCCCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCc-ccceEE
Q psy14257 212 KSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNS-LSNIDV 290 (841)
Q Consensus 212 ~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~-~~~~~~ 290 (841)
++. ...|+|++++.++|+++++++..+..+++.+.+++||+|+..++. |||+|...++|+++++++.. .....+
T Consensus 78 ~~~---~~~~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~--lywsD~~~~~I~~~~~~g~~~~~~~~~ 152 (400)
T 3p5b_L 78 KAV---GSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNR--IYWSDLSQRMICSTQLDRAHGVSSYDT 152 (400)
T ss_dssp CCS---TTSCEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTE--EEEEETTTTEEEEEEC------CCCEE
T ss_pred eec---cccceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCc--eEEEecCCCeEEEEEcccCCCCCcceE
Confidence 987 568999999999999999999888888999999999999998776 99999999999999887531 013455
Q ss_pred EEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCC
Q psy14257 291 VVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 370 (841)
Q Consensus 291 ~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~ 370 (841)
++..++..|.||||||.+
T Consensus 153 ~~~~~~~~p~glavD~~~-------------------------------------------------------------- 170 (400)
T 3p5b_L 153 VISRDIQAPDGLAVDWIH-------------------------------------------------------------- 170 (400)
T ss_dssp EECSSCSCEEEEEEETTT--------------------------------------------------------------
T ss_pred EEeCCCCCcccEEEEecC--------------------------------------------------------------
Confidence 666677777777777654
Q ss_pred CeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEE
Q psy14257 371 NTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIA 450 (841)
Q Consensus 371 ~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~gia 450 (841)
++|||+|...++|++++++|+.+++++...+..|++||
T Consensus 171 ------------------------------------------~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~ia 208 (400)
T 3p5b_L 171 ------------------------------------------SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIV 208 (400)
T ss_dssp ------------------------------------------TEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEE
T ss_pred ------------------------------------------CceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEE
Confidence 78888888888999999999998888888899999999
Q ss_pred EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEE
Q psy14257 451 LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHV 530 (841)
Q Consensus 451 vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~ 530 (841)
|||..|+||||||+. .++|+|+++||+.+++++. ..+.+|+|||||+.+++|||+|...++|++++++|..+++
T Consensus 209 vdp~~g~ly~td~~~-~~~I~~~~~dG~~~~~~~~-----~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (400)
T 3p5b_L 209 VDPVHGFMYWTDWGT-PAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 282 (400)
T ss_dssp EETTTTEEEEEECSS-SCCEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred EecccCeEEEEeCCC-CCEEEEEeCCCCccEEEEE-----CCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEE
Confidence 999999999999983 5899999999999999887 6889999999999999999999999999999999999999
Q ss_pred EEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCC---CCCCCC
Q psy14257 531 VLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCE---MNNGNC 602 (841)
Q Consensus 531 i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~---~~ng~C 602 (841)
++.....+.+|+||++++++|||+||.+++|.+++|.+|+...++...+..|++ +| +||.+.|||. .+||+|
T Consensus 283 ~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~c~~~~~~ng~C 362 (400)
T 3p5b_L 283 ILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGC 362 (400)
T ss_dssp EEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGSCCCCCSSSSSSSGGGGC
T ss_pred EEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccCCCCCCccccccCCCcCc
Confidence 987656689999999999999999999999999999999999988888888988 66 8999999996 468999
Q ss_pred ccccccCCCC-----ceeeeCCCCceeecCCCccc
Q psy14257 603 SHLCLIGMNG-----TYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 603 s~lC~~~~~~-----~~~C~Cp~g~~l~~d~~tC~ 632 (841)
+|||++.+.. +|+|+||+||.|.+|+++|.
T Consensus 363 ~~lC~~~~~~~~~~~~~~C~C~~g~~l~~d~~~C~ 397 (400)
T 3p5b_L 363 QYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 397 (400)
T ss_dssp SSEEEECCCSSTTCCSEEEECCTTCEECTTSSSEE
T ss_pred CCeecCCCcccCCCCCeeEECCCCCEECCCCCccC
Confidence 9999998752 69999999999999999998
No 6
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=3.6e-63 Score=553.79 Aligned_cols=377 Identities=40% Similarity=0.794 Sum_probs=293.2
Q ss_pred ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEeecCCeeecCCCCce
Q psy14257 132 DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C 211 (841)
+||...++.|++.|.++.|+|.|.|++||.|.++++.|++++||...+.|++.|.++ .++|+|.|.+||.+..++++|
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~--~g~~~C~C~~g~~l~~d~~~C 81 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNS--EGAFQCWCEAGYELRPDRRSC 81 (386)
T ss_dssp ------------------------------------------------CCTTEEC-------CCEECCTTEEECTTSSCE
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCC--CCCCeEEECCCceEcCCCCeE
Confidence 578777788999999999999999999999999999999999997668999999999 999999999999999999999
Q ss_pred EeCCCCCCCCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEE
Q psy14257 212 KSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVV 291 (841)
Q Consensus 212 ~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~ 291 (841)
++. ..+++|++++.++|+++++++..+..++.++..+.+++|+...+. |||+|...++|+|++++++ ..+++
T Consensus 82 ~~~---~~~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~--ly~~D~~~~~I~r~~~~g~---~~~~~ 153 (386)
T 3v65_B 82 KAL---GPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRREL--VFWSDVTLDRILRANLNGS---NVEEV 153 (386)
T ss_dssp EEC---SSCCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTE--EEEEETTTTEEEEEETTSC---CEEEE
T ss_pred CCc---cccceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCe--EEEEeCCCCcEEEEecCCC---CcEEE
Confidence 998 448999999999999999999888888999999999999987776 9999999999999998765 34556
Q ss_pred EeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCC
Q psy14257 292 VQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 371 (841)
Q Consensus 292 ~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~ 371 (841)
+..++..|.|||+||.+
T Consensus 154 ~~~~~~~p~glavd~~~--------------------------------------------------------------- 170 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVH--------------------------------------------------------------- 170 (386)
T ss_dssp ECSSCSCCCCEEEETTT---------------------------------------------------------------
T ss_pred EeCCCCCccEEEEEeCC---------------------------------------------------------------
Confidence 66677778888887654
Q ss_pred eEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEE
Q psy14257 372 TVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIAL 451 (841)
Q Consensus 372 ~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giav 451 (841)
++|||+|...++|.+++++|+.+++++..++..|++|||
T Consensus 171 -----------------------------------------g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giav 209 (386)
T 3v65_B 171 -----------------------------------------DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIAL 209 (386)
T ss_dssp -----------------------------------------TEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEE
T ss_pred -----------------------------------------CeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEE
Confidence 777888888888999999998888888888999999999
Q ss_pred cCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEE
Q psy14257 452 DPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 452 d~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i 531 (841)
||.+|+|||+|++. .++|+|+++||+.+++++. ..+.+|+|||||+.+++|||+|...++|++++++|+.++++
T Consensus 210 dp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~-----~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~ 283 (386)
T 3v65_B 210 HPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIAD-----THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 283 (386)
T ss_dssp ETTTTEEEEEECSS-SCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEE
T ss_pred EcCCCeEEEeccCC-CCEEEEEeCCCCCcEEEEE-----CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEE
Confidence 99999999999982 3899999999999999887 67899999999999999999999999999999999999888
Q ss_pred EcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCCCCCCcccc
Q psy14257 532 LSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMNNGNCSHLC 606 (841)
Q Consensus 532 ~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~ng~Cs~lC 606 (841)
+... +.+|+||++++++|||+||.+++|.+++|.+|+..+++...+..|++ +| +||.+.|||..+||+|+|||
T Consensus 284 ~~~~--~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~~~n~C~~~ng~C~~lC 361 (386)
T 3v65_B 284 ISQG--LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLC 361 (386)
T ss_dssp ECSS--CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCCCCCTTTTSCTTSSSEE
T ss_pred EECC--CCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcCCcCccccCCCCCCcee
Confidence 7654 78999999999999999999999999999999999988888889988 55 88999999999999999999
Q ss_pred ccCCCCceeeeCCCCceeecCCCccc
Q psy14257 607 LIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 607 ~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
++.+. +++|+||+||. ..|+++|.
T Consensus 362 l~~~~-~~~C~C~~g~~-~~d~~~C~ 385 (386)
T 3v65_B 362 LPSGQ-NYTCACPTGFR-KINSHACA 385 (386)
T ss_dssp ECCSS-SCEEECCTTCB-CSSSSCCB
T ss_pred eeCCC-CCeeECCCCCc-CCCCCccC
Confidence 99986 69999999999 99999997
No 7
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=2e-56 Score=492.34 Aligned_cols=337 Identities=42% Similarity=0.836 Sum_probs=294.3
Q ss_pred ccccCCCCCccCceeecCCCCceEEeecCCeeecCCCCceEeCCCCCCCCeEEeccCccccccccccccEEEEeccccce
Q psy14257 172 LHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNT 251 (841)
Q Consensus 172 ~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~ 251 (841)
++||..++.|+|.|.|+ .|+|+|.|++||.|..++++|++. ..+++|++++.+.|+++++++..+..+++++.++
T Consensus 1 i~ec~~~~~C~~~C~n~--~g~~~C~C~~g~~l~~d~~~C~~~---~~~~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~ 75 (349)
T 3v64_C 1 VNECAEEGYCSQGCTNS--EGAFQCWCEAGYELRPDRRSCKAL---GPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENA 75 (349)
T ss_dssp --------CCSSEECCC-----CCEECCTTEEECTTSSCEEES---SSCCEEEEECBSCEEEECTTSCCEEEEECSCSCE
T ss_pred CcccCCCCCCcCeeecC--CCCeEEECCCCccCCCCCCccccc---ccCceeEeecccceEEEeCCCCeeEEeecCCCce
Confidence 46887668999999999 999999999999999999999998 3489999999999999999998888888999999
Q ss_pred eeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEE
Q psy14257 252 IALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIE 331 (841)
Q Consensus 252 ~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~ 331 (841)
.+++|+..++. |||+|...++|+|++++++. .+.++..++..|.|||+||.+
T Consensus 76 ~~l~~d~~~~~--ly~~D~~~~~I~r~~~~g~~---~~~~~~~~~~~p~glavd~~~----------------------- 127 (349)
T 3v64_C 76 IALDFHHRREL--VFWSDVTLDRILRANLNGSN---VEEVVSTGLESPGGLAVDWVH----------------------- 127 (349)
T ss_dssp EEEEEETTTTE--EEEEETTTTEEEEEETTSCS---CEEEECSSCSCCCEEEEETTT-----------------------
T ss_pred EEEEEeccccE--EEEEeccCCceEEEecCCCC---ceEEEeCCCCCccEEEEecCC-----------------------
Confidence 99999987777 99999999999999987653 455666677778888777654
Q ss_pred EEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc
Q psy14257 332 KAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI 411 (841)
Q Consensus 332 ~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~ 411 (841)
T Consensus 128 -------------------------------------------------------------------------------- 127 (349)
T 3v64_C 128 -------------------------------------------------------------------------------- 127 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 412 GKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
++|||+|...++|.+++++|+.+++++...+..|++|||||.+|+|||+|++. .++|+|+++||+.+++++. .
T Consensus 128 -g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~-~~~I~r~~~dG~~~~~~~~-----~ 200 (349)
T 3v64_C 128 -DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN-TPRIEASSMDGSGRRIIAD-----T 200 (349)
T ss_dssp -TEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEESCC-----S
T ss_pred -CeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCC-CCEEEEEeCCCCCcEEEEE-----C
Confidence 77778887778888888888888888877889999999999999999999982 3899999999999988876 6
Q ss_pred CCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
.+.+|+|||+|+.+++|||+|...++|++++++|+.+++++... +.+|+||++++++|||+||.+++|.+++|.+|+.
T Consensus 201 ~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~--~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 201 HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCC--CCCceEEEEECCEEEEecCCCCeEEEEEccCCCc
Confidence 78999999999999999999999999999999999998887654 7899999999999999999999999999999999
Q ss_pred eEEEecccCCCce---ec--cCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 572 VTLIQRTLTQPFI---YV--NGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 572 ~~~i~~~~~~p~~---~h--~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
.+++...+..|++ +| +||.+.|||..+||+|+|||++.+. +++|+||+||. ..|+++|.
T Consensus 279 ~~~i~~~~~~p~gi~v~~~~~qp~~~n~C~~~~g~C~~lCl~~~~-~~~C~C~~g~~-~~d~~~C~ 342 (349)
T 3v64_C 279 QEIIRNKLHFPMDIHTLHPQRQPAGKNRCGDNNGGCTHLCLPSGQ-NYTCACPTGFR-KINSHACA 342 (349)
T ss_dssp CEEEECSCSCCCCEEEECGGGSCCCCCTTTTGGGGCSSEEECCTT-SCEEECCTTEE-EETTTEEE
T ss_pred cEEeccCCCCCceEEEEccccCccccCcccCCCCCcccEeecCCC-CCeeECCCCCc-CCCCCccc
Confidence 9988888889998 56 8899999999999999999999986 69999999999 99999998
No 8
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=1.1e-53 Score=502.87 Aligned_cols=392 Identities=34% Similarity=0.689 Sum_probs=323.6
Q ss_pred CCCCeEEecc--Ccccccccccccc-EEEE-eccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEe
Q psy14257 218 DSSPFVIFSN--RHELRGVDLRTFN-VIAL-ISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQ 293 (841)
Q Consensus 218 ~~~p~ll~s~--~~~I~~~~~~~~~-~~~l-~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~ 293 (841)
.....++|++ .+.|+++++++.. ...+ ..++..+.++++|...++ |||+|...++|.+++++|. ..++++.
T Consensus 49 ~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~--ly~~d~~~~~I~v~~~dG~---~~~~l~~ 123 (619)
T 3s94_A 49 FSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEK--LYWTDSETNRIEVSNLDGS---LRKVLFW 123 (619)
T ss_dssp TTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTE--EEEEETTTTEEEEEETTSC---SCEEEEC
T ss_pred eCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCE--EEEEeCCCCEEEEEECCCC---CEEEEEe
Confidence 3455677776 4678888888753 2333 445566655555554456 9999999999999999864 4566777
Q ss_pred CCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeE
Q psy14257 294 TGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 373 (841)
Q Consensus 294 ~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I 373 (841)
..+..|.+||||+. +++||||||+.. ++|+|++|||+.+++++...+.+|+||++|+.+++|||+|...++|
T Consensus 124 ~~l~~P~~Iavdp~--~g~ly~tD~g~~------~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I 195 (619)
T 3s94_A 124 QELDQPRAIALDPS--SGFMYWTDWGEV------PKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFI 195 (619)
T ss_dssp SSCSCCCCEEEETT--TTEEEEEECSSS------CEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCE
T ss_pred CCCCCCceEEEecC--CCeEEEeccCCC------CEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeE
Confidence 88999999999974 579999999854 4999999999999999988999999999999999999999999999
Q ss_pred EEEEecCCccEEEEee--------e-----------------------------------------eecC----------
Q psy14257 374 ESVRVDGSERTVSFNL--------E-----------------------------------------VLGS---------- 394 (841)
Q Consensus 374 ~~~~ldG~~~~~~~~~--------~-----------------------------------------~~~~---------- 394 (841)
++++++|+.++++... . ++..
T Consensus 196 ~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C 275 (619)
T 3s94_A 196 HKSNLDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPC 275 (619)
T ss_dssp EEESSSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTT
T ss_pred EEecCCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccc
Confidence 9999999877643210 0 0000
Q ss_pred --------------CC-c-------cc----------------------------------------cCC----------
Q psy14257 395 --------------DS-R-------VG----------------------------------------IPN---------- 402 (841)
Q Consensus 395 --------------~~-~-------~~----------------------------------------i~~---------- 402 (841)
+. . .| ++.
T Consensus 276 ~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld 355 (619)
T 3s94_A 276 GIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAID 355 (619)
T ss_dssp TTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEE
T ss_pred cCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccceEEEecCCCccceeEEeccccCccEEEE
Confidence 00 0 00 000
Q ss_pred --------------------------------------CCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCC
Q psy14257 403 --------------------------------------CRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDME 444 (841)
Q Consensus 403 --------------------------------------~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~ 444 (841)
...+|+||++++|||+|...++|++++++|+.+++++..++.
T Consensus 356 ~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~l~~~~l~ 435 (619)
T 3s94_A 356 YDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKILISEDLE 435 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCC
T ss_pred EEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEEEEECCCC
Confidence 001368999999999999999999999999999999988899
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
+|++|||||.+|+||||||+. .++|+|+.|||+.+++++. ..+.+|+|||||+.+++|||+|..+++|++++++
T Consensus 436 ~P~~iavdp~~G~ly~tD~g~-~~~I~r~~~dG~~~~~l~~-----~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~d 509 (619)
T 3s94_A 436 EPRAIVLDPMVGYMYWTDWGE-IPKIERAALDGSDRVVLVN-----TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTD 509 (619)
T ss_dssp SEEEEEEETTTTEEEEEECSS-SCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESS
T ss_pred CeeeEEEEcCCCcEEEecCCC-CCEEEEEccCCCccEEEEe-----CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecC
Confidence 999999999999999999983 5899999999999998886 6799999999999999999999999999999999
Q ss_pred CCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec-cCCcccCCCCCCCC
Q psy14257 525 GKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV-NGVVKKSPCEMNNG 600 (841)
Q Consensus 525 G~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h-~qp~~~n~C~~~ng 600 (841)
|+.+++++.. .+.+|+||++++++||||||.+++|.+++|.+| ..+++...+..|++ +| .++.+.|+|..+||
T Consensus 510 G~~~~~~~~~--~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~~~~~~i~~~~~~~~~~~~~C~~~ng 586 (619)
T 3s94_A 510 GTGRRVLVED--KIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQLPDLMGLKATNVHRVIGSNPCAEENG 586 (619)
T ss_dssp SCCCEEEEEC--CCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSCCCEEEEEEEESSCCCCCCGGGSGGG
T ss_pred CCceEEEecc--CCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCCCCCceeeecccccccccccCCCCCC
Confidence 9999988764 388999999999999999999999999999999 55667777788888 55 44558999999999
Q ss_pred CCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 601 NCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 601 ~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
+|+|+|++.+.+ ++|+||.||.|.+|+++|.
T Consensus 587 ~C~~~C~~~~~~-~~C~C~~g~~l~~d~~~C~ 617 (619)
T 3s94_A 587 GCSHLCLYRPQG-LRCACPIGFELISDMKTCI 617 (619)
T ss_dssp GCSSEEEEETTE-EEEECCTTCEECSSTTCEE
T ss_pred ChhHhhccCCCC-eEEECCCCCEECCCCCcCC
Confidence 999999998865 9999999999999999998
No 9
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=8.2e-54 Score=513.15 Aligned_cols=425 Identities=26% Similarity=0.525 Sum_probs=186.2
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc------------
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC------------ 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C------------ 69 (841)
+|||..|+|||..||.|||||. +|....|..++|+|. +++||+..|+|||..||. |+|||.+|
T Consensus 78 ~Ci~~~~~CDg~~dC~dgsDE~--~C~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~--dgsDE~~C~~~~C~~~~f~C 152 (791)
T 3m0c_C 78 RCIPQFWRCDGQVDCDNGSDEQ--GCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDCL--DGSDEASCPVLTCGPASFQC 152 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEeeccccCCCCcCcCCCcccC--CccCccccCCeEECC-CCCEECHHHcCCCcccCC--CCcccccccccccccceecc
Confidence 6999999999999999999998 998889999999998 899999999999999999 99999877
Q ss_pred --------------ccCCCCCCCCC--CccCCCCCCCCCCCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc--
Q psy14257 70 --------------VNDCTDWSDET--NCTHSGNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC-- 131 (841)
Q Consensus 70 --------------~~dC~~~~de~--~C~~c~~~~~c~~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C-- 131 (841)
..||.|++||. +|..-.....-...|.+.+|.|.+ +.||+.+++|||..+|.+++||..|
T Consensus 153 ~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~--g~Ci~~~~~CDg~~dC~dgsDE~~C~~ 230 (791)
T 3m0c_C 153 NSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLS--GECIHSSWRCDGGPDCKDKSDEENCAV 230 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccccccccCCCCCcCCCCCCcccccCCCccccCCCCCCCCCCcccccC--CceeccccccCCCCCCCCCCCCCCccc
Confidence 47899999996 553200000012346666777765 6777777777777777777777655
Q ss_pred cccccc-----CCCCC---------CCcccCCCCcEE------------------------------ecCCCceecCCCC
Q psy14257 132 DEKQCL-----RSDCH---------HDCYNTPEGFMC------------------------------VCPRDMYLQPDLI 167 (841)
Q Consensus 132 ~eC~~~-----~~~C~---------~~C~~~~g~~~C------------------------------~C~~Gy~l~~d~~ 167 (841)
..|... ++.|. ..|.+...++.| .|+.|+- .+..
T Consensus 231 ~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsD--e~~~ 308 (791)
T 3m0c_C 231 ATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSD--EPIK 308 (791)
T ss_dssp ------------------------------------------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCS--CCCT
T ss_pred cccCCCcceecCCceEecceecCChhccccccccCcccccccccCCCccccCCCcccccccccCCccccccccC--cccc
Confidence 222211 11221 023333222222 3333321 1122
Q ss_pred ccccccccCC-CCCccCceeecCCCCceEEeecCCeeecCCCCceEeCCCCCCCCeEEeccCccccccccccccEE----
Q psy14257 168 TCSYLHPCEA-WGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSNRHELRGVDLRTFNVI---- 242 (841)
Q Consensus 168 ~C~~~~eC~~-~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~---- 242 (841)
.| +.+||.. .+.|++.|.++ .++|.|.|++||.+ .+++.|.++++.. .+... .+ + =++.. +.+.
T Consensus 309 ~C-~~~~C~~~~~~C~~~C~~~--~~~y~C~C~~Gy~l-~~g~~C~dideC~-~~~~C-~~---~-C~n~~-gsy~C~C~ 377 (791)
T 3m0c_C 309 EC-GTNECLDNNGGCSHVCNDL--KIGYECLCPDGFQL-VAQRRCEDIDECQ-DPDTC-SQ---L-CVNLE-GGYKCQCE 377 (791)
T ss_dssp TB-SCCSTTTGGGGCSSEEEEC--SBSEEEECCTTCEE-ETTTEEECCCCCS-SSSSC-TT---T-CCBCS-SCBCCCCC
T ss_pred cc-ccccccccccCccccccCC--CCCcccCCCCCCcc-CCCCccccCcccC-CCCCC-CC---e-eecCC-CCceeecC
Confidence 34 3567763 46789999999 99999999999998 6789999885432 11100 00 0 00000 0000
Q ss_pred ---EEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeec
Q psy14257 243 ---ALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWS 319 (841)
Q Consensus 243 ---~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~ 319 (841)
.+....+.-.+++. .. .||+++
T Consensus 378 ~Gy~l~~~~~~C~~~~~---~p--~Ll~an-------------------------------------------------- 402 (791)
T 3m0c_C 378 EGFQLDPHTKACKAVGS---IA--YLFFTN-------------------------------------------------- 402 (791)
T ss_dssp SSEECCSSCCCCEETTS---CC--EEEEEC--------------------------------------------------
T ss_pred CCCEeCCCCceeeeccc---cc--cccccc--------------------------------------------------
Confidence 00000011111110 00 122221
Q ss_pred CCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccc
Q psy14257 320 LSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVG 399 (841)
Q Consensus 320 ~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~ 399 (841)
...|.++.+++.....++ ..+..|.||++|+.+++|||+|...++|++++++|....
T Consensus 403 -------~~~Ir~i~l~~~~~~~l~-~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~--------------- 459 (791)
T 3m0c_C 403 -------RHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV--------------- 459 (791)
T ss_dssp -------BSSEEEECTTSCCCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------
T ss_pred -------ccceeEeeccCCcceeee-cCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCC---------------
Confidence 124555555554433332 346677788888777788888877777777766653100
Q ss_pred cCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC
Q psy14257 400 IPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH 479 (841)
Q Consensus 400 i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~ 479 (841)
....+++...+..|.|||||+..+.|||+|+. ..+|++++++|+.
T Consensus 460 ---------------------------------~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~--~~~I~v~~ldG~~ 504 (791)
T 3m0c_C 460 ---------------------------------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSV--LGTVSVADTKGVK 504 (791)
T ss_dssp -----------------------------------CEEEECSSCSCCCEEEEETTTTEEEEEETT--TTEEEEEETTSSS
T ss_pred ---------------------------------cceeEEEecCCCCcceeeeeecCCcEEEEecC--CCeEEEEeCCCCe
Confidence 11234455578899999999999999999988 7899999999999
Q ss_pred cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCC-CeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeC
Q psy14257 480 RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKS-DSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDW 556 (841)
Q Consensus 480 ~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~-~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~ 556 (841)
+++++. ..+..|.|||||+..++|||+|.+. ++|++++++|+.+++++... +..|.||++. +++|||+|+
T Consensus 505 ~~~l~~-----~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~--l~~P~GLavD~~~~~LYwaD~ 577 (791)
T 3m0c_C 505 RKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTEN--IQWPNGITLDLLSGRLYWVDS 577 (791)
T ss_dssp EEEEEE-----CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSS--CSCEEEEEEETTTTEEEEEET
T ss_pred EEEEEe-----CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCC--CCCceEEEEecCCCeEEEEeC
Confidence 999987 6888999999999999999999876 89999999999999888653 7899999997 699999999
Q ss_pred CCCeEEEEec
Q psy14257 557 RTNSVIRANK 566 (841)
Q Consensus 557 ~~~~i~~~~~ 566 (841)
..++|.+++.
T Consensus 578 ~~~~I~~~d~ 587 (791)
T 3m0c_C 578 KLHSISSIDV 587 (791)
T ss_dssp TTTEEEEEET
T ss_pred CCCcEEEEec
Confidence 9999888875
No 10
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=2.5e-53 Score=500.13 Aligned_cols=339 Identities=27% Similarity=0.546 Sum_probs=294.3
Q ss_pred cccccC-CCCCccCceeecCCC-CceEEeecCCeeecCCCCceEeCCCCCCCCeEEeccCccccccccccc---cEEEEe
Q psy14257 171 YLHPCE-AWGTCSQDCEPSVSN-NSYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSNRHELRGVDLRTF---NVIALI 245 (841)
Q Consensus 171 ~~~eC~-~~~~Cs~~C~~~~~~-g~~~C~C~~G~~l~~d~~~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~---~~~~l~ 245 (841)
..+||. .++.|+|.|.++ + ++|+|.|++||.|..++++|.+. .++|+|++...|+++.++.. .....+
T Consensus 264 ~~n~C~~~ng~C~~~C~~~--~~~~~~C~C~~g~~l~~d~~~C~~~-----~~~Ll~s~~~~i~~i~l~~~~~~~~~l~~ 336 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAV--PVGGFVCGCPAHYSLNADNRTCSAP-----TTFLLFSQKSAINRMVIDEQQSPDIILPI 336 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEE--TTTEEEEECSTTCEECTTSSCEECC-----SSEEEEEETTEEEEECCCTTCCCCEECCC
T ss_pred cceEeccCCCCcchhhhcC--CCCCeeEEcCCCcEecccCCcCccc-----cceeeeeccceEEEEecccccCceEEEEe
Confidence 468997 457899999998 7 99999999999999999999864 68999999999999988753 233345
Q ss_pred ccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeC------CCCCccceEEeeecCceeEEEeeec
Q psy14257 246 SSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQT------GLSTAEGLAVDWIGKNLYMFWAFWS 319 (841)
Q Consensus 246 ~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~------~l~~p~giavD~~~~~~y~~~td~~ 319 (841)
.++++++|||||..+++ |||+|...++|+|+.++|.. ..+++.. ++..|+|||+||.+
T Consensus 337 ~~~~~~~~ld~d~~~~~--iy~sD~~~~~I~r~~~~g~~---~~~v~~~~~~~~~~~~~p~glAvD~~~----------- 400 (628)
T 4a0p_A 337 HSLRNVRAIDYDPLDKQ--LYWIDSRQNMIRKAQEDGSQ---GFTVVVSSVPSQNLEIQPYDLSIDIYS----------- 400 (628)
T ss_dssp TTCSCEEEEEEETTTTE--EEEEETTTTEEEEEETTSCS---CEEEEC--------CCCEEEEEEETTT-----------
T ss_pred hhcCCceEEEEecCCCe--EEEEecCcceEEEEEcCCCC---ceEEEEcccccccccCCcceEEeeccC-----------
Confidence 67889999999998877 99999999999999887542 3344432 45566666666554
Q ss_pred CCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccc
Q psy14257 320 LSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVG 399 (841)
Q Consensus 320 ~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~ 399 (841)
T Consensus 401 -------------------------------------------------------------------------------- 400 (628)
T 4a0p_A 401 -------------------------------------------------------------------------------- 400 (628)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC
Q psy14257 400 IPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH 479 (841)
Q Consensus 400 i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~ 479 (841)
++|||+|...++|++++++|+.+++++...+.+|++|||||.+|+||||||+...++|+|++|||+.
T Consensus 401 -------------~nLY~td~~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~ 467 (628)
T 4a0p_A 401 -------------RYIYWTCEATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTE 467 (628)
T ss_dssp -------------TEEEEEETTTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCS
T ss_pred -------------CeEEEEcCCCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCC
Confidence 8889999889999999999999989888889999999999999999999998422389999999999
Q ss_pred cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCC
Q psy14257 480 RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTN 559 (841)
Q Consensus 480 ~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~ 559 (841)
+++++. ..+.+|+||+||+.+++|||+|..+++|++++++|+.++++... .+.+|+||++++++|||+||.++
T Consensus 468 ~~~l~~-----~~l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~--~~~~P~glav~~~~ly~tD~~~~ 540 (628)
T 4a0p_A 468 REVLFF-----SGLSKPIALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDS--NILQPVGLTVFENWLYWIDKQQQ 540 (628)
T ss_dssp CEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCEEEEEEETTEEEEEETTTT
T ss_pred cEEEEe-----ccCCCccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcC--CCCCcEEEEEECCEEEEEECCCC
Confidence 999987 68999999999999999999999999999999999999998864 37899999999999999999999
Q ss_pred eEEEEeccCCcceEEEecccCCCce---ec---cCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 560 SVIRANKWNGSDVTLIQRTLTQPFI---YV---NGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 560 ~i~~~~~~~g~~~~~i~~~~~~p~~---~h---~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
+|.+++|.+|+..+++...+.+|++ +| .++...|||..+||+|+|+|++.+.+.++|+||.||.|.+|+++|-
T Consensus 541 ~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~~~~~~n~c~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~~~ 619 (628)
T 4a0p_A 541 MIEKIDMTGREGRTKVQARIAQLSDIHAVKELNLQEYRQHPCAQDNGGCSHICLVKGDGTTRCSCPMHLVLLQDELSCG 619 (628)
T ss_dssp EEEEEETTSSSCCEEEECCCTTEEEEEEECCCCHHHHHHSTTTTGGGGCSSEEEECTTSCEEEECCTTEEECTTSSCEE
T ss_pred eEEEEECcCCCCcEEEeccCCCCcceEEEeecccCccccccCCCCCCCcchhcccCCCCCeeeeCCCCCEECCCCCcCC
Confidence 9999999999999888877778877 44 1234789999999999999999988889999999999999999998
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=1.7e-51 Score=491.95 Aligned_cols=438 Identities=28% Similarity=0.542 Sum_probs=273.2
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCC-CeEecCCCCCCCCCCcccCCCCCCCcc-----------
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNET-LRCIPLAWACDGQPDCGLNDTSDEDHC----------- 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~-~~Ci~~~~~Cdg~~dC~~~d~sde~~C----------- 69 (841)
+||+..|+|||..||.|||||....|...+|...+|+|.+. ++|||..|+|||..||. |||||.+|
T Consensus 17 ~ci~~~~~Cdg~~dC~d~sDE~~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~--dgsDE~~C~~~~C~~~~f~ 94 (699)
T 1n7d_A 17 KCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCD--NGSDEQGCPPKTCSQDEFR 94 (699)
T ss_dssp ---------------------------CCSCSSSSCCCCC--CCCCCSSSTTSSSCCC---CCCTTTSCSSCCCCSSCCC
T ss_pred cEEcHHhcCCCcccCCCCCCCCccccCCcCCCCCccCCCCCCCceeCcceecCCcccCC--CCcccCcccccccccCcEE
Confidence 59999999999999999999994459888999999999743 58999999999999999 99999876
Q ss_pred ---------------ccCCCCCCCCCCccC--CCCCCC-CC--------------------------------------C
Q psy14257 70 ---------------VNDCTDWSDETNCTH--SGNRTI-SA--------------------------------------P 93 (841)
Q Consensus 70 ---------------~~dC~~~~de~~C~~--c~~~~~-c~--------------------------------------~ 93 (841)
..||.|++||.+|.. |.+.+| |. .
T Consensus 95 C~~g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC~dgsDE~~~~C~~~~~~~~~~~ 174 (699)
T 1n7d_A 95 CHDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWACDNDPDCEDGSDEWPQRCRGLYVFQGDSS 174 (699)
T ss_dssp SSCC----CCCTTCSSCCSSSSCSSSSCCCCCCCSSCCCCSSSCCCCTTSTTCSSCCSSSSSSSSCSSSSCCCCCSSCCC
T ss_pred cCCCCEecHHHcCCCcCcCCCCCccCCcCccccCccccCCCCCcccchhcccCCCCcCCCCcccccccCCCcccccCCCC
Confidence 479999999999875 655544 31 1
Q ss_pred CCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc--ccccccCCCCC-C----------------------Cccc-
Q psy14257 94 ACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC--DEKQCLRSDCH-H----------------------DCYN- 147 (841)
Q Consensus 94 ~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C--~eC~~~~~~C~-~----------------------~C~~- 147 (841)
.|.+.+|.|.+ +.||+.+++|||..+|.+|+||..| .+|......|. . .|.+
T Consensus 175 ~C~~~~f~C~~--g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC~dgsde~~C~~~ 252 (699)
T 1n7d_A 175 PCSAFEFHCLS--GECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQCDREYDCKDMSDEVGCVNV 252 (699)
T ss_dssp CSCSSSCCCSS--SCCCSTTCTTSSSCCSTTSCSSCSCCCCCCCSSEEESSSSCEEETTCCSSSCCCSSSSCSSSSTTCC
T ss_pred CCCCcceecCC--CceEechhccCCCCCCCCCcccccCCCcccCCCcEecCCCceeeeecccCCCCCCCCCCccCCCCCC
Confidence 46778899988 8999999999999999999999887 24432211221 0 1221
Q ss_pred ----CCCCcEE---ecCCCceecCCCCccc----------cccccC-CCCCccCceeecCCCCceEEeecCCeeecCCCC
Q psy14257 148 ----TPEGFMC---VCPRDMYLQPDLITCS----------YLHPCE-AWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMF 209 (841)
Q Consensus 148 ----~~g~~~C---~C~~Gy~l~~d~~~C~----------~~~eC~-~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~ 209 (841)
.++.|.| .|.+..........|. +++||. ..+.|++.|.++ .++|+|.|++||.+ .+++
T Consensus 253 ~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~eC~~~~~~C~~~C~~~--~~~~~C~C~~G~~~-~~~~ 329 (699)
T 1n7d_A 253 TLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDL--KIGYECLCPDGFQL-VAQR 329 (699)
T ss_dssp CCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSCCCCCTTSSTTTSCTTCCCC--TTCCCCCCCSSSCC-CSSS
T ss_pred CcccCCCceecCCCcEeCCcccccccceecCcccccccccccccccccccCcCCCcccC--CCCcEEeCCCCeEc-CCCC
Confidence 1222333 1222221111112222 467886 356799999999 99999999999998 6788
Q ss_pred ceEeCCCCCCCCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceE
Q psy14257 210 TCKSKSKNDSSPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNID 289 (841)
Q Consensus 210 ~C~~~~~~~~~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~ 289 (841)
.|.++++... +.. -.+ +- ++.. ..+.- ....+ |-.+ .++.+ -+
T Consensus 330 ~C~dideC~~-~~~-C~~---~C-~n~~-g~y~C-------------~C~~G----~~~~----------~~~~~---C~ 372 (699)
T 1n7d_A 330 RCEDIDECQD-PDT-CSQ---LC-VNLE-GGYKC-------------QCEEG----FQLD----------PHTKA---CK 372 (699)
T ss_dssp CCCCCCCCSS-SSS-CTT---TC-CBCS-SCBCC-------------CCCSS----CBCC----------SSCCC---CB
T ss_pred cccCccccCC-CCc-ccc---cc-ccCC-CCeee-------------eeecc----cccC----------CCCCc---cc
Confidence 9988744321 100 000 00 0000 00000 00000 0000 00000 00
Q ss_pred EEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCC
Q psy14257 290 VVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 369 (841)
Q Consensus 290 ~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~ 369 (841)
+++.. ..+++ + ....|.++++++.....++ ..+..|.||++|+.+++|||+|..
T Consensus 373 -------------~~~~~-~~ll~--~---------~~~~I~~id~~~~~~~~~~-~~~~~p~gla~d~~~~~Ly~sD~~ 426 (699)
T 1n7d_A 373 -------------AVGSI-AYLFF--T---------NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLS 426 (699)
T ss_dssp -------------CCSSC-CCBCC--C---------CTTC-CEECTTSCCEECCS-CCCTTCCCCEEETTTTEEEECCTT
T ss_pred -------------ccccc-eeEEe--c---------CccceEEEeCCCCcceeee-ccCcceEEEccccccCeEEEEecC
Confidence 00000 01111 0 1125666666665444333 346788899999888888888887
Q ss_pred CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeE
Q psy14257 370 LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAI 449 (841)
Q Consensus 370 ~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~gi 449 (841)
.++|++++++|... +....+++...+..|.||
T Consensus 427 ~~~I~~~~~~g~~~------------------------------------------------~~~~~~~i~~~~~~P~gl 458 (699)
T 1n7d_A 427 QRMICSTQLDRAHG------------------------------------------------VSSYDTVISRDIQAPDGL 458 (699)
T ss_dssp TTSBEEEESCCCCC-------------------------------------------------CCCCCBCCSCC--CCCE
T ss_pred CCeEEEEecCCCCC------------------------------------------------CcceEEEEeCCCCCcceE
Confidence 77777777665210 011122333456789999
Q ss_pred EEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCC-CeEEEEEcCCCee
Q psy14257 450 ALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKS-DSIHTVTYDGKDH 528 (841)
Q Consensus 450 avd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~-~~I~~~~~dG~~~ 528 (841)
|||+..+.|||+|.. ..+|++++++|..+++++. ..+..|.||+||+.+++|||+|... ++|++++++|+.+
T Consensus 459 avD~~~g~LY~tD~~--~~~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~ 531 (699)
T 1n7d_A 459 AVDWIHSNIYWTDSV--LGTVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI 531 (699)
T ss_dssp ECCCSSSBCEECCTT--TSCEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC
T ss_pred EEEeeCCcEEEEecc--CCeEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe
Confidence 999989999999987 7899999999998888776 5688999999999999999999875 8999999999988
Q ss_pred EEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEec
Q psy14257 529 HVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 529 ~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~ 566 (841)
++++.. .+..|.||++. +++|||+|+.+++|.+++.
T Consensus 532 ~~l~~~--~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~ 569 (699)
T 1n7d_A 532 YSLVTE--NIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 569 (699)
T ss_dssp CEESCS--SCSSCCCEEECTTTCCEEEEETTTTEEEEECS
T ss_pred eEEEeC--CCCCccEEEEeccCCEEEEEecCCCeEEEEcc
Confidence 877654 37889999995 6899999999888887764
No 12
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=1.4e-49 Score=431.02 Aligned_cols=300 Identities=40% Similarity=0.857 Sum_probs=264.6
Q ss_pred CCCCeEEeccCccccccccccc--cEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCC
Q psy14257 218 DSSPFVIFSNRHELRGVDLRTF--NVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTG 295 (841)
Q Consensus 218 ~~~p~ll~s~~~~I~~~~~~~~--~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 295 (841)
+++|+|+|+++++|+++++++. ....++.++++++||||+..++. |||+|...++|+|++++++. ..++++..+
T Consensus 2 g~~p~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~--lyw~D~~~~~I~r~~~~g~~--~~~~~~~~~ 77 (318)
T 3sov_A 2 GSAPLLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGL--IYWSDVSEEAIKRTEFNKTE--SVQNVVVSG 77 (318)
T ss_dssp --CCEEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTE--EEEEETTTTEEEEEETTSSS--CCCEEEEEC
T ss_pred CCccEEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCE--EEEEECCCCcEEEEEccCCC--ceEEEEcCC
Confidence 4689999999999999999886 46677788899999999998777 99999999999999987653 234555666
Q ss_pred CCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEE
Q psy14257 296 LSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 375 (841)
Q Consensus 296 l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~ 375 (841)
+..|+|||+||.+
T Consensus 78 l~~p~glavd~~~------------------------------------------------------------------- 90 (318)
T 3sov_A 78 LLSPDGLACDWLG------------------------------------------------------------------- 90 (318)
T ss_dssp CSCCCEEEEETTT-------------------------------------------------------------------
T ss_pred CCCccEEEEEcCC-------------------------------------------------------------------
Confidence 7777777777654
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCC
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRF 455 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~ 455 (841)
++|||+|...++|++++++|+.+++++...+..|+|||+||..
T Consensus 91 -------------------------------------g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~ 133 (318)
T 3sov_A 91 -------------------------------------EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSS 133 (318)
T ss_dssp -------------------------------------TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGG
T ss_pred -------------------------------------CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCC
Confidence 7778888778888888888888888887788999999999999
Q ss_pred CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC
Q psy14257 456 GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH 535 (841)
Q Consensus 456 g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~ 535 (841)
|+|||+|++ ..++|+|+++||+.+++++. ..+.+|+||++|+.+++|||+|...++|++++++|+.+++++..
T Consensus 134 g~ly~td~~-~~~~I~r~~~dG~~~~~~~~-----~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~- 206 (318)
T 3sov_A 134 GFMYWTDWG-EVPKIERAGMDGSSRFIIIN-----SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKG- 206 (318)
T ss_dssp TEEEEEECS-SSCEEEEEETTSCSCEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-
T ss_pred CEEEEEecC-CCCEEEEEEcCCCCeEEEEE-----CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecC-
Confidence 999999987 36899999999999998886 67899999999999999999999999999999999999988863
Q ss_pred CCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCCCCCCccccccCC
Q psy14257 536 DSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMNNGNCSHLCLIGM 610 (841)
Q Consensus 536 ~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~ng~Cs~lC~~~~ 610 (841)
.+.+|+||++++++|||+||.+++|.++++.+|+..+.+...+.+|++ +| +||...|||..+||+|+|+|++.+
T Consensus 207 -~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~~~~n~C~~~ng~Cs~~C~~~~ 285 (318)
T 3sov_A 207 -SLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSP 285 (318)
T ss_dssp -CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGGSCCCCCTTTTTGGGCSSEEEECS
T ss_pred -CCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEeccccccccccccccCCCCcceEEecCC
Confidence 378999999999999999999999999999999988888877888988 56 889899999999999999999998
Q ss_pred CC-ceeeeCCCCceeecCCCcccc
Q psy14257 611 NG-TYKCQCPHVMKLMSDNKTCQV 633 (841)
Q Consensus 611 ~~-~~~C~Cp~g~~l~~d~~tC~~ 633 (841)
.+ +|+|+||+||.|.+|+++|..
T Consensus 286 ~~~~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 286 VKPFYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp STTSEEEECSTTCCBCTTSSCBCC
T ss_pred CCCCeEEECCCCCEECCCCCCCCC
Confidence 65 599999999999999999983
No 13
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=1.9e-47 Score=415.17 Aligned_cols=299 Identities=35% Similarity=0.713 Sum_probs=258.6
Q ss_pred CCeEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCC---cccceEEEEeCCC
Q psy14257 220 SPFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGN---SLSNIDVVVQTGL 296 (841)
Q Consensus 220 ~p~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~---~~~~~~~~~~~~l 296 (841)
+|+|+|++.++|+++++++.++..+++.+.++.+++|+...+. |||+|...++|+++++++. + ..++++..++
T Consensus 1 ~~~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~--ly~~D~~~~~I~~~~~~g~~~~~--~~~~~~~~~~ 76 (316)
T 1ijq_A 1 IAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNR--IYWSDLSQRMICSTQLDRAHGVS--SYDTVISRDI 76 (316)
T ss_dssp CCEEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTE--EEEEETTTTEEEEEEC----------CEEEECSSC
T ss_pred CCEEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCE--EEEEECCCCcEEEEECCCCCCCc--ccEEEEeCCC
Confidence 4899999999999999999888888888999999999987766 9999999999999988752 2 2334444455
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 376 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~ 376 (841)
..|.|||+||.+
T Consensus 77 ~~p~glavd~~~-------------------------------------------------------------------- 88 (316)
T 1ijq_A 77 QAPDGLAVDWIH-------------------------------------------------------------------- 88 (316)
T ss_dssp SCCCEEEEETTT--------------------------------------------------------------------
T ss_pred CCcCEEEEeecC--------------------------------------------------------------------
Confidence 566666666543
Q ss_pred EecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCC
Q psy14257 377 RVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFG 456 (841)
Q Consensus 377 ~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g 456 (841)
++|||+|...++|.+++++|+.+++++...+..|++||+||.+|
T Consensus 89 ------------------------------------~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g 132 (316)
T 1ijq_A 89 ------------------------------------SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 132 (316)
T ss_dssp ------------------------------------TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred ------------------------------------CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC
Confidence 67777777778888888888888888777789999999999999
Q ss_pred eEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC
Q psy14257 457 LLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD 536 (841)
Q Consensus 457 ~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~ 536 (841)
+|||+|++. .++|+|+++||+.+++++. ..+.+|+||++|+.+++|||+|...++|++++++|+.+++++....
T Consensus 133 ~ly~~d~~~-~~~I~~~~~dG~~~~~~~~-----~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~ 206 (316)
T 1ijq_A 133 FMYWTDWGT-PAKIKKGGLNGVDIYSLVT-----ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEK 206 (316)
T ss_dssp EEEEEECSS-SCEEEEEETTSCCEEEEEC-----SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTT
T ss_pred EEEEEccCC-CCeEEEEcCCCCCeEEEEE-----CCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCC
Confidence 999999972 3899999999999988876 5789999999999999999999999999999999999998887545
Q ss_pred CCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCce---ec--cCCcccCCCCCC---CCCCcccccc
Q psy14257 537 SLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFI---YV--NGVVKKSPCEMN---NGNCSHLCLI 608 (841)
Q Consensus 537 ~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~---~h--~qp~~~n~C~~~---ng~Cs~lC~~ 608 (841)
.+.+|+||++++++|||+||.+++|.++++.+|+..+.+...+..|++ +| +||.+.|+|..+ ||+|+|+|++
T Consensus 207 ~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~~~~ng~Cs~~C~~ 286 (316)
T 1ijq_A 207 RLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVNWCERTTLSNGGCQYLCLP 286 (316)
T ss_dssp TTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCCTTSSSSSGGGGCSSEEEE
T ss_pred ccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEEeccccCCcccccccccccCCCCcCcccCC
Confidence 678999999999999999999999999999999988888877888988 55 889999999998 9999999998
Q ss_pred CCC-----CceeeeCCCCceeecCCCccc
Q psy14257 609 GMN-----GTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 609 ~~~-----~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
.+. ++|+|+||+||.|.+|+++|.
T Consensus 287 ~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 287 APQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred CccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 863 569999999999999999997
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=6.8e-32 Score=302.10 Aligned_cols=311 Identities=22% Similarity=0.385 Sum_probs=221.7
Q ss_pred CeEecC--CCCCCCCCCCCCCCC---Cccc---ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCC
Q psy14257 107 RTCIPK--ALVCDGEPACFNGED---EMFC---DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAW 178 (841)
Q Consensus 107 ~~Ci~~--~~~Cdg~~~C~~g~d---e~~C---~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~ 178 (841)
+.|++. ++.| .|+.||. +..| +||. .++.|++.|.|++|+|.|.|.+||.+.+++++|+++.+....
T Consensus 12 ~~C~~~~~~y~C----~C~~G~~~~~~~~C~dideC~-~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~l 86 (400)
T 3p5b_L 12 HVCNDLKIGYEC----LCPDGFQLVAQRRCEDIDECQ-DPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYL 86 (400)
T ss_dssp SEEEECSSSEEE----ECCTTEEECSSSCEEECCCCS-TTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEE
T ss_pred CEeECCCCCeEE----ECCCCCCcCCCCcccCchhhh-ccCCCCCccCCCccceeeeccccccccccccceeecccccee
Confidence 566654 7889 8999994 6679 8998 457999999999999999999999999999999887543100
Q ss_pred CCccCcee---ecCCCCceEEeecCCeeecCCCCceEeCCCCCCCCeEEecc--Ccccccccccc----ccEEEEec-cc
Q psy14257 179 GTCSQDCE---PSVSNNSYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSN--RHELRGVDLRT----FNVIALIS-SL 248 (841)
Q Consensus 179 ~~Cs~~C~---~~~~~g~~~C~C~~G~~l~~d~~~C~~~~~~~~~p~ll~s~--~~~I~~~~~~~----~~~~~l~~-~~ 248 (841)
-.-.+.-+ .. ....+. .+......-..++++.....|+|++ .+.|+++++++ .....++. .+
T Consensus 87 l~~~~~~I~~i~l-~~~~~~-------~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 87 FFTNRHEVRKMTL-DRSEYT-------SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp EEEETTEEEEECT-TSCSCE-------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSC
T ss_pred EEeccceeEEEcc-CCccee-------EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCC
Confidence 00001000 00 011111 1111112222232233455677775 46788888876 23445554 56
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.++++|...++ |||+|...++|.+++++|. ..++++..++..|.||||||.+
T Consensus 159 ~~p~glavD~~~~~--lY~~d~~~~~I~~~~~~g~---~~~~l~~~~~~~P~~iavdp~~-------------------- 213 (400)
T 3p5b_L 159 QAPDGLAVDWIHSN--IYWTDSVLGTVSVADTKGV---KRKTLFRENGSKPRAIVVDPVH-------------------- 213 (400)
T ss_dssp SCEEEEEEETTTTE--EEEEETTTTEEEEECTTTC---SEEEEEECSSCCEEEEEEETTT--------------------
T ss_pred CCcccEEEEecCCc--eEEEECCCCeEEEEeCCCC---ceEEEEeCCCCCcceEEEeccc--------------------
Confidence 66766666655566 9999999999999988764 3556666677777777777643
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcc
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN 408 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~av 408 (841)
T Consensus 214 -------------------------------------------------------------------------------- 213 (400)
T 3p5b_L 214 -------------------------------------------------------------------------------- 213 (400)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccceEEEEecC-CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec
Q psy14257 409 LWIGKNLYWVESN-LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD 487 (841)
Q Consensus 409 dw~~~~LY~tD~~-~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~ 487 (841)
+.|||||.. .++|++++++|+.+++++..++..|+|||+|+.++.|||+|+. ..+|+++++||+.+++++..
T Consensus 214 ----g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~--~~~I~~~d~dG~~~~~~~~~- 286 (400)
T 3p5b_L 214 ----GFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK--LHSISSIDVNGGNRKTILED- 286 (400)
T ss_dssp ----TEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT--TTEEEEEETTSCCCEEEEEC-
T ss_pred ----CeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC--CCEEEEEeCCCCccEEEEeC-
Confidence 334444433 2567777777777777777778999999999999999999988 78999999999999998862
Q ss_pred ccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE-cCCCeeEEEEcCCCCCCcceEEEEecC
Q psy14257 488 LLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT-YDGKDHHVVLSNHDSLTHPFAIALFEN 549 (841)
Q Consensus 488 ~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~-~dG~~~~~i~~~~~~l~~P~gla~~~~ 549 (841)
...+..|.||+++ +++|||+|..+++|.+++ .+|+.++++... +.+|++|+++..
T Consensus 287 --~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~---~~~p~~i~v~~~ 342 (400)
T 3p5b_L 287 --EKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAEN---LLSPEDMVLFHN 342 (400)
T ss_dssp --SSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECS---CSCEEEEEEESG
T ss_pred --CCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecC---CCCCceEEEEee
Confidence 1357899999996 689999999999999999 789888888643 678999999764
No 15
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-32 Score=302.89 Aligned_cols=301 Identities=22% Similarity=0.417 Sum_probs=194.6
Q ss_pred CCCCCCCCCCCCCCC----Cccc---ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccC--
Q psy14257 113 ALVCDGEPACFNGED----EMFC---DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQ-- 183 (841)
Q Consensus 113 ~~~Cdg~~~C~~g~d----e~~C---~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~-- 183 (841)
++.| .|+.||. +..| +||. .++.|++.|.|++|+|.|.|++||.+.+++++|+..++ ...-..+.
T Consensus 23 ~~~C----~C~~G~~l~~~~~~C~d~~eC~-~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~-~~~l~~~~~~ 96 (386)
T 3v65_B 23 AVQC----TCHTGYRLTEDGRTCQDVNECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP-EPVLLFANRI 96 (386)
T ss_dssp ----------------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEECSS-CCEEEEECBS
T ss_pred CcEe----ECCCCceECCCCCccCccceeC-CcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccc-cceeEeecCc
Confidence 6889 8999995 6679 7997 45799999999999999999999999999999997754 21111111
Q ss_pred -ce-eecCCCCceEEeecCCeeecCCCCceEeCCCCCCCCeEEecc--CccccccccccccEEEEe-ccccceeeecccc
Q psy14257 184 -DC-EPSVSNNSYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSN--RHELRGVDLRTFNVIALI-SSLKNTIALDFYY 258 (841)
Q Consensus 184 -~C-~~~~~~g~~~C~C~~G~~l~~d~~~C~~~~~~~~~p~ll~s~--~~~I~~~~~~~~~~~~l~-~~~~~~~avd~~~ 258 (841)
.- ... ..+.+. .+......-..+.++.....|+|++ .+.|+++++++.....++ .++..+.+++++.
T Consensus 97 ~I~~i~~-~~~~~~-------~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~ 168 (386)
T 3v65_B 97 DIRQVLP-HRSEYT-------LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDW 168 (386)
T ss_dssp CEEEECT-TSCCCE-------EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEET
T ss_pred cceeecc-CCCcEE-------EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEe
Confidence 00 000 011111 1111112222222233455677765 467889998887666654 3455665666655
Q ss_pred cCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCC
Q psy14257 259 TPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGE 338 (841)
Q Consensus 259 ~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~ 338 (841)
..+. |||+|...++|.+++++|. ..++++..++..|.||||||.+
T Consensus 169 ~~g~--lY~~d~~~~~I~~~~~dg~---~~~~l~~~~l~~P~giavdp~~------------------------------ 213 (386)
T 3v65_B 169 VHDK--LYWTDSGTSRIEVANLDGA---HRKVLLWQSLEKPRAIALHPME------------------------------ 213 (386)
T ss_dssp TTTE--EEEEETTTTEEEECBTTSC---SCEEEECSSCSCEEEEEEETTT------------------------------
T ss_pred CCCe--EEEEcCCCCeEEEEeCCCC---ceEEeecCCCCCCcEEEEEcCC------------------------------
Confidence 5566 9999999999999988754 3445555555666666666433
Q ss_pred ccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEE
Q psy14257 339 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWV 418 (841)
Q Consensus 339 ~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~t 418 (841)
+.|||+
T Consensus 214 --------------------------------------------------------------------------g~ly~t 219 (386)
T 3v65_B 214 --------------------------------------------------------------------------GTIYWT 219 (386)
T ss_dssp --------------------------------------------------------------------------TEEEEE
T ss_pred --------------------------------------------------------------------------CeEEEe
Confidence 444444
Q ss_pred ecCC-CcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCce
Q psy14257 419 ESNL-DQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPN 497 (841)
Q Consensus 419 D~~~-~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~ 497 (841)
|... ++|++++++|+.+++++..++..|+|||+|+..++|||+|+. .++|++++++|+.++.++. ..+..|.
T Consensus 220 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~--~~~I~~~d~dG~~~~~~~~-----~~~~~P~ 292 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAK--HHVIERANLDGSHRKAVIS-----QGLPHPF 292 (386)
T ss_dssp ECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETT--TTEEEEECTTSCSCEEEEC-----SSCSSEE
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECC--CCEEEEEeCCCCeeEEEEE-----CCCCCce
Confidence 4444 567777777777777777778899999999999999999988 7899999999999988876 5788999
Q ss_pred eEEEeccCCEEEEEeCCCCeEEEEE-cCCCeeEEEEcCCCCCCcceEEEEec
Q psy14257 498 GLTLDYQLTRIYWIDAKSDSIHTVT-YDGKDHHVVLSNHDSLTHPFAIALFE 548 (841)
Q Consensus 498 glalD~~~~~LYw~d~~~~~I~~~~-~dG~~~~~i~~~~~~l~~P~gla~~~ 548 (841)
||+++ +++|||+|..+++|.+++ ++|..++++... +..|++|+++.
T Consensus 293 giav~--~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~---~~~p~gi~v~~ 339 (386)
T 3v65_B 293 AITVF--EDSLYWTDWHTKSINSANKFTGKNQEIIRNK---LHFPMDIHTLH 339 (386)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEETTTCCSCEEEECS---CSCCCCEEEES
T ss_pred EEEEE--CCEEEEeeCCCCeEEEEECCCCcceEEEccC---CCCCceEEEEc
Confidence 99995 689999999999999999 789988888753 68899999864
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=3.1e-31 Score=291.44 Aligned_cols=287 Identities=22% Similarity=0.394 Sum_probs=198.1
Q ss_pred ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCcc---CceeecCCCCceEEeecCCeeecCCC
Q psy14257 132 DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCS---QDCEPSVSNNSYKCTCHAGYELEPDM 208 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs---~~C~~~~~~g~~~C~C~~G~~l~~d~ 208 (841)
+||. .++.|+|.|.|++|+|.|.|++||.|.+|+++|+..++ ...-..+ ..-.-......+. .+....
T Consensus 2 ~ec~-~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~-~~~ll~~~~~~I~~i~~~g~~~~-------~~~~~~ 72 (349)
T 3v64_C 2 NECA-EEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP-EPVLLFANRIDIRQVLPHRSEYT-------LLLNNL 72 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS-CCEEEEECBSCEEEECTTSCCEE-------EEECSC
T ss_pred cccC-CCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc-CceeEeecccceEEEeCCCCeeE-------EeecCC
Confidence 5787 67899999999999999999999999999999988764 2111111 1110000011111 011111
Q ss_pred CceEeCCCCCCCCeEEecc--CccccccccccccEEEEe-ccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcc
Q psy14257 209 FTCKSKSKNDSSPFVIFSN--RHELRGVDLRTFNVIALI-SSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSL 285 (841)
Q Consensus 209 ~~C~~~~~~~~~p~ll~s~--~~~I~~~~~~~~~~~~l~-~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~ 285 (841)
..-..+.++.....|+|++ .+.|+++++++.....++ .++..+.++++|...++ |||+|...++|.+++++|.
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~--ly~~d~~~~~I~~~~~dG~-- 148 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK--LYWTDSGTSRIEVANLDGA-- 148 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE--EEEEETTTTEEEEEETTSC--
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCe--EEEEcCCCCeEEEEcCCCC--
Confidence 2222232233455677765 567899999887665554 45566666666655566 9999999999999988754
Q ss_pred cceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEE
Q psy14257 286 SNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 365 (841)
Q Consensus 286 ~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYw 365 (841)
..++++..++..|.||||||.+
T Consensus 149 -~~~~l~~~~l~~P~~iavdp~~--------------------------------------------------------- 170 (349)
T 3v64_C 149 -HRKVLLWQSLEKPRAIALHPME--------------------------------------------------------- 170 (349)
T ss_dssp -SCEEEECTTCSCEEEEEEETTT---------------------------------------------------------
T ss_pred -ceEEEEeCCCCCcceEEEecCc---------------------------------------------------------
Confidence 3445555566666666666533
Q ss_pred EeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCC-CcEEEEccCCceEEEEecCCCC
Q psy14257 366 CDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNL-DQIEVAKLSGQFRRTLIAGDME 444 (841)
Q Consensus 366 aD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~-~~I~v~~~~G~~~~~l~~~~l~ 444 (841)
+.|||+|... ++|++++++|+.+++++..++.
T Consensus 171 -----------------------------------------------g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~ 203 (349)
T 3v64_C 171 -----------------------------------------------GTIYWTDWGNTPRIEASSMDGSGRRIIADTHLF 203 (349)
T ss_dssp -----------------------------------------------TEEEEEECSSSCEEEEEETTSCSCEESCCSSCS
T ss_pred -----------------------------------------------CeEEEeccCCCCEEEEEeCCCCCcEEEEECCCC
Confidence 4444444444 5666777777666666666788
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE-c
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT-Y 523 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~-~ 523 (841)
.|+|||+|+.++.|||+|+. .++|+++++||+.+++++. ..+..|.||+++ +++|||+|..+++|.+++ +
T Consensus 204 ~PnGla~d~~~~~lY~aD~~--~~~I~~~~~dG~~~~~~~~-----~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAK--HHVIERANLDGSHRKAVIS-----QGLPHPFAITVF--EDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEEC-----SSCSSEEEEEEE--TTEEEEEETTTTEEEEEETT
T ss_pred CcceEEEeCCCCEEEEEECC--CCEEEEEeCCCCceEEEEe-----CCCCCceEEEEE--CCEEEEecCCCCeEEEEEcc
Confidence 99999999999999999998 7899999999999988876 568999999995 689999999999999999 7
Q ss_pred CCCeeEEEEcCCCCCCcceEEEEec
Q psy14257 524 DGKDHHVVLSNHDSLTHPFAIALFE 548 (841)
Q Consensus 524 dG~~~~~i~~~~~~l~~P~gla~~~ 548 (841)
+|+.++++... +.+|++|+++.
T Consensus 275 ~G~~~~~i~~~---~~~p~gi~v~~ 296 (349)
T 3v64_C 275 TGKNQEIIRNK---LHFPMDIHTLH 296 (349)
T ss_dssp TCCSCEEEECS---CSCCCCEEEEC
T ss_pred CCCccEEeccC---CCCCceEEEEc
Confidence 89988888753 67899999865
No 17
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.96 E-value=2.1e-27 Score=250.82 Aligned_cols=239 Identities=28% Similarity=0.530 Sum_probs=198.8
Q ss_pred CEEEEccCCCcccc-----ccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCC
Q psy14257 329 GIEKAGMHGENRSP-----LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNC 403 (841)
Q Consensus 329 ~I~~~~~dG~~~~~-----l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~ 403 (841)
+|.|++++|+..+. +...+...|.||++|+.+++|||+|...++|.+++++|+..+.+.... +...
T Consensus 11 ~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~---------~~~p 81 (267)
T 1npe_A 11 KIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD---------LGSP 81 (267)
T ss_dssp EEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---------CCCE
T ss_pred eEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC---------CCCc
Confidence 89999999987543 333356789999999999999999999999999999998766543211 1111
Q ss_pred CCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEE
Q psy14257 404 RPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVI 483 (841)
Q Consensus 404 ~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i 483 (841)
..+++|+.+++|||+|...++|.+++++|+..++++..++..|++|++||.+|+|||++++...++|+++.+||+.++++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~ 161 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL 161 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE
Confidence 23478888899999999999999999999887777777788999999999889999999864357999999999988877
Q ss_pred EEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEE
Q psy14257 484 VRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIR 563 (841)
Q Consensus 484 ~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~ 563 (841)
.. ..+..|+||++|+.+++|||+|...++|.+++++|..+..+... +.+|+||++++++|||+++.+++|.+
T Consensus 162 ~~-----~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~---~~~P~gi~~d~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 162 AQ-----DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG---LQYPFAVTSYGKNLYYTDWKTNSVIA 233 (267)
T ss_dssp EC-----TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC---CCSEEEEEEETTEEEEEETTTTEEEE
T ss_pred EE-----CCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC---CCCceEEEEeCCEEEEEECCCCeEEE
Confidence 65 56789999999988899999999999999999999887777653 67899999999999999999999999
Q ss_pred EeccCCcceEEEecc-cCCCce
Q psy14257 564 ANKWNGSDVTLIQRT-LTQPFI 584 (841)
Q Consensus 564 ~~~~~g~~~~~i~~~-~~~p~~ 584 (841)
+++.+|+....+... ...|.+
T Consensus 234 ~d~~~g~~~~~i~~g~~~~p~g 255 (267)
T 1npe_A 234 MDLAISKEMDTFHPHKQTRLYG 255 (267)
T ss_dssp EETTTTEEEEEECCSSCCCCCC
T ss_pred EeCCCCCceEEEccccccccce
Confidence 999888877666432 224555
No 18
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.94 E-value=2e-25 Score=235.70 Aligned_cols=253 Identities=24% Similarity=0.397 Sum_probs=194.8
Q ss_pred CeEEeccCccccccccccccE-----EEEec-cccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeC
Q psy14257 221 PFVIFSNRHELRGVDLRTFNV-----IALIS-SLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQT 294 (841)
Q Consensus 221 p~ll~s~~~~I~~~~~~~~~~-----~~l~~-~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~ 294 (841)
|+|+|++.+.|+++++++... ..++. ..+++.+++|+...+. |||+|...++|++++++++. ...++..
T Consensus 2 ~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~--ly~~d~~~~~I~~~~~~g~~---~~~~~~~ 76 (267)
T 1npe_A 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKV--VYWTDISEPSIGRASLHGGE---PTTIIRQ 76 (267)
T ss_dssp EEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTE--EEEEETTTTEEEEEESSSCC---CEEEECT
T ss_pred cEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCE--EEEEECCCCEEEEEecCCCC---cEEEEEC
Confidence 678999989999999987542 23332 3467888888886666 99999999999999987653 3455666
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEE
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 374 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~ 374 (841)
++..|.+||+||.+ .++||+|.+ .++|.+++++|+..+.+....+..|++|++|+.+++|||+|...
T Consensus 77 ~~~~p~~ia~d~~~--~~lyv~d~~-------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~---- 143 (267)
T 1npe_A 77 DLGSPEGIALDHLG--RTIFWTDSQ-------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR---- 143 (267)
T ss_dssp TCCCEEEEEEETTT--TEEEEEETT-------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS----
T ss_pred CCCCccEEEEEecC--CeEEEEECC-------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC----
Confidence 77899999999865 455667654 35999999999888777777788999999999877777777541
Q ss_pred EEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCC
Q psy14257 375 SVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPR 454 (841)
Q Consensus 375 ~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~ 454 (841)
..++|.+++++|+..+++....+..|.+||+|+.
T Consensus 144 ----------------------------------------------~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 144 ----------------------------------------------DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAF 177 (267)
T ss_dssp ----------------------------------------------SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETT
T ss_pred ----------------------------------------------CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCC
Confidence 0234444555555444444456778999999998
Q ss_pred CCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEc
Q psy14257 455 FGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLS 533 (841)
Q Consensus 455 ~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~ 533 (841)
+++|||++.+ .++|++++++|..++.++. .+..|.||++| +++|||++...++|.+++++ |+..+++..
T Consensus 178 ~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~------~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 178 SSQLCWVDAG--THRAECLNPAQPGRRKVLE------GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp TTEEEEEETT--TTEEEEEETTEEEEEEEEE------CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred CCEEEEEECC--CCEEEEEecCCCceEEEec------CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 8999999988 7899999999977766654 56789999998 68999999999999999997 455555543
Q ss_pred CCCCCCcceEEEEecC
Q psy14257 534 NHDSLTHPFAIALFEN 549 (841)
Q Consensus 534 ~~~~l~~P~gla~~~~ 549 (841)
. ....|+||++..+
T Consensus 248 g--~~~~p~gi~~~~~ 261 (267)
T 1npe_A 248 H--KQTRLYGITIALS 261 (267)
T ss_dssp S--SCCCCCCEEEECS
T ss_pred c--cccccceeeecCc
Confidence 2 2457999998643
No 19
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.94 E-value=6.3e-25 Score=237.55 Aligned_cols=250 Identities=26% Similarity=0.484 Sum_probs=200.7
Q ss_pred ceEEEEecCCCcEEEEccCCce-EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-EEEEEecccC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQF-RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-SVIVRVDLLT 490 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-~~i~~~~~~~ 490 (841)
-.|+++. .+.|.++++++.. ..+++..++..|.+|++|+..+.|||+|.. ..+|+|++++|+.. +.++.
T Consensus 5 p~ll~~~--~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~----- 75 (318)
T 3sov_A 5 PLLLYAN--RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVS--EEAIKRTEFNKTESVQNVVV----- 75 (318)
T ss_dssp CEEEEEC--EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETT--TTEEEEEETTSSSCCCEEEE-----
T ss_pred cEEEEEc--cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECC--CCcEEEEEccCCCceEEEEc-----
Confidence 4678876 4689999999873 222333457789999999999999999987 78999999999853 34444
Q ss_pred CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCC-CCeEEEEecc
Q psy14257 491 SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWR-TNSVIRANKW 567 (841)
Q Consensus 491 ~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~-~~~i~~~~~~ 567 (841)
..+..|.|||+|..+++|||+|...++|++++++|..++++... .+..|.||++. +++|||+||. .++|++++..
T Consensus 76 ~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~--~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 76 SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ--ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC--CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 47889999999998999999999999999999999988888754 37899999996 5899999986 5667666532
Q ss_pred CCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeE
Q psy14257 568 NGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREI 647 (841)
Q Consensus 568 ~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i 647 (841)
|+..+ .++.
T Consensus 154 -G~~~~-----------------------------------------------------------------~~~~----- 162 (318)
T 3sov_A 154 -GSSRF-----------------------------------------------------------------IIIN----- 162 (318)
T ss_dssp -SCSCE-----------------------------------------------------------------EEEC-----
T ss_pred -CCCeE-----------------------------------------------------------------EEEE-----
Confidence 11100 0000
Q ss_pred EEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCc
Q psy14257 648 RGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGG 727 (841)
Q Consensus 648 ~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (841)
.++..|.+|++|+.+++|||+|...++|++++++|+.
T Consensus 163 ------------------~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~------------------------- 199 (318)
T 3sov_A 163 ------------------SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN------------------------- 199 (318)
T ss_dssp ------------------SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-------------------------
T ss_pred ------------------CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-------------------------
Confidence 1234578999999999999999999999999999987
Q ss_pred eEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec-CCcceEEEEcCCCCCCCcCCCceEEEEeCC
Q psy14257 728 QIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL-EGEYQTTILSNESNDTSTLSKISSIAVWPV 799 (841)
Q Consensus 728 ~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l-~g~~~~~~~~~~~~~~~~l~~p~~iavd~~ 799 (841)
+++++...+..|.|||+| .+.|||+ +...++|.+++. +|+.++++... +.+|.+|+|...
T Consensus 200 -~~~~~~~~~~~P~glav~--~~~lywt--d~~~~~V~~~~~~~G~~~~~i~~~-------~~~P~~i~v~~~ 260 (318)
T 3sov_A 200 -RQAVVKGSLPHPFALTLF--EDILYWT--DWSTHSILACNKYTGEGLREIHSD-------IFSPMDIHAFSQ 260 (318)
T ss_dssp -CEEEECSCCSCEEEEEEE--TTEEEEE--ETTTTEEEEEETTTCCSCEEEECC-------CSSCCCEEEECG
T ss_pred -eEEEecCCCCCceEEEEe--CCEEEEE--ecCCCeEEEEECCCCCceEEEeCC-------CCCCcEEEEecc
Confidence 666666678999999998 7899999 568899999998 68888788776 789999998644
No 20
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.94 E-value=6.2e-24 Score=230.12 Aligned_cols=248 Identities=19% Similarity=0.406 Sum_probs=196.2
Q ss_pred eEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC----CCcEEEEEeccc
Q psy14257 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG----EHRSVIVRVDLL 489 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG----~~~~~i~~~~~~ 489 (841)
.|+|+.. +.|.++++++.....++. .+..|.||++|+.++.|||+|.. ..+|++++++| +..+.++.
T Consensus 3 ~ll~~~~--~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~---- 73 (316)
T 1ijq_A 3 YLFFTNR--HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVIS---- 73 (316)
T ss_dssp EEEEECB--SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEEC----
T ss_pred EEEEECC--CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEe----
Confidence 5777764 579999999876555554 67899999999999999999987 78999999998 55555554
Q ss_pred CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCC-CeEEEEec
Q psy14257 490 TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRT-NSVIRANK 566 (841)
Q Consensus 490 ~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~-~~i~~~~~ 566 (841)
..+..|.|||+|..+++|||+|...++|++++++|..+++++... +..|.+|++. +++|||+|+.. ++|++++.
T Consensus 74 -~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 74 -RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp -SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT--TCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred -CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC--CCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 567899999999889999999999999999999999888877643 6799999996 68999999875 66666553
Q ss_pred cCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCe
Q psy14257 567 WNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPRE 646 (841)
Q Consensus 567 ~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~ 646 (841)
. |+..+ .++
T Consensus 151 d-G~~~~-----------------------------------------------------------------~~~----- 159 (316)
T 1ijq_A 151 N-GVDIY-----------------------------------------------------------------SLV----- 159 (316)
T ss_dssp T-SCCEE-----------------------------------------------------------------EEE-----
T ss_pred C-CCCeE-----------------------------------------------------------------EEE-----
Confidence 1 11000 000
Q ss_pred EEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccC
Q psy14257 647 IRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVG 726 (841)
Q Consensus 647 i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (841)
...+..|.+|++|+.+++|||+|...++|++++++|+.
T Consensus 160 ------------------~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~------------------------ 197 (316)
T 1ijq_A 160 ------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN------------------------ 197 (316)
T ss_dssp ------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS------------------------
T ss_pred ------------------ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc------------------------
Confidence 01234678999999999999999999999999999987
Q ss_pred ceEEEEee--CCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec-CCcceEEEEcCCCCCCCcCCCceEEEEeCC
Q psy14257 727 GQIQLVVD--AGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL-EGEYQTTILSNESNDTSTLSKISSIAVWPV 799 (841)
Q Consensus 727 ~~~~~i~~--~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l-~g~~~~~~~~~~~~~~~~l~~p~~iavd~~ 799 (841)
+++++. ..+..|.|||+| .++|||+ +...++|.+++. +|+..+++..+ +..|.+|+|+..
T Consensus 198 --~~~~~~~~~~~~~P~giav~--~~~ly~~--d~~~~~V~~~~~~~g~~~~~i~~~-------~~~p~~i~v~~~ 260 (316)
T 1ijq_A 198 --RKTILEDEKRLAHPFSLAVF--EDKVFWT--DIINEAIFSANRLTGSDVNLLAEN-------LLSPEDMVLFHN 260 (316)
T ss_dssp --CEEEEECTTTTSSEEEEEEE--TTEEEEE--ETTTTEEEEEETTTCCCCEEEECS-------CSCCCCEEEESG
T ss_pred --eEEEeecCCccCCcEEEEEE--CCEEEEE--ECCCCeEEEEeCCCCcceEEEecC-------CCCceEEEEecc
Confidence 445554 347889999998 6899999 567899999986 78888888777 889999998753
No 21
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.91 E-value=2.1e-22 Score=215.26 Aligned_cols=262 Identities=13% Similarity=0.175 Sum_probs=198.4
Q ss_pred eeEEEecC-CCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCC------CCCCCEEEEccC
Q psy14257 264 MVFWTDVI-DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSN------SSDGGIEKAGMH 336 (841)
Q Consensus 264 ~lyw~d~~-~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~------~~~~~I~~~~~d 336 (841)
.||+++.. .++|++++.+|.. .+.+.. + .+..|.++ + .|+|.+.....+.. .....|++.++|
T Consensus 27 ~iy~~n~~d~~~ly~~~~dg~~---~~~l~~-~--~~~~i~~~--g--~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~d 96 (302)
T 3s25_A 27 EVFFSNTNDNGRLYAMNIDGSN---IHKLSN-D--TAMYINAD--K--NYVYYVRNNNQKITSQTFFSYDRNSLCRIKRN 96 (302)
T ss_dssp EEEEEEGGGTTEEEEEETTSCS---CEEEEE-E--EEEEEEEC--S--SEEEEEEECC------CCSSCCSEEEEEEETT
T ss_pred EEEEEeCCCCceEEEEcCCCCC---CEEccC-C--ceeeEEEc--C--CEEEEEECCCCcccccceeccCCCeEEEEeCC
Confidence 49999754 5789999988754 333322 2 35556554 4 44455544321110 124579999999
Q ss_pred CCccccccccCcCCCceEEEEccCCEEEEEe---CCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccc
Q psy14257 337 GENRSPLVTKNIQWPSSLVIDYNQDILYWCD---SHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGK 413 (841)
Q Consensus 337 G~~~~~l~~~~~~~P~glavD~~~~~lYwaD---~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~ 413 (841)
|+.++.|... .+.++.+.+++|||+| .....|+++++||++++++..... ++++|+++
T Consensus 97 g~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~--------------~~~~~~g~ 157 (302)
T 3s25_A 97 GHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL--------------FTCNTSDR 157 (302)
T ss_dssp SCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC--------------CCSEEETT
T ss_pred CCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc--------------eEeeEECC
Confidence 9987766543 3457777899999999 577899999999999888764321 36799999
Q ss_pred eEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCC
Q psy14257 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRG 493 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~ 493 (841)
.|||++.+..+|++++++|..++.+... +..++++|..++|||++|.. ..+|+|++|||+.+++|.. ..+
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~-~~~I~~~~ldG~~~~~Lt~-----~~~ 227 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNR-DNAIVHVNINNPNPVVLTE-----ANI 227 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGG-TTEEEEECSSSCCCEECSC-----SCE
T ss_pred EEEEEeCCCceEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCC-CcEEEEEECCCCCeEEEeC-----CCc
Confidence 9999999889999999999998877543 44566788999999999974 4899999999999988865 333
Q ss_pred CCceeEEEeccCCEEEEE-eCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 494 AWPNGLTLDYQLTRIYWI-DAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~-d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
| .+|+.+++|||+ +...+.|+++++||+.++++.... ..+|++++++|||+||.+++|++++ .+|++.
T Consensus 228 --~---~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~~-----~~~i~i~~d~Iy~td~~~~~i~~~~-~dGs~~ 296 (302)
T 3s25_A 228 --E---HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKGE-----FCNINVTSQYVYFTDFVSNKEYCTS-TQNPDT 296 (302)
T ss_dssp --E---EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEESC-----EEEEEECSSEEEEEETTTCCEEEEE-SSSCCS
T ss_pred --c---eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCCc-----cceEEEeCCEEEEEECCCCeEEEEE-CCCCCc
Confidence 2 377789999997 666789999999999999887642 3589999999999999999999986 566665
Q ss_pred EEE
Q psy14257 573 TLI 575 (841)
Q Consensus 573 ~~i 575 (841)
+.+
T Consensus 297 ~~l 299 (302)
T 3s25_A 297 IKA 299 (302)
T ss_dssp CEE
T ss_pred eEe
Confidence 433
No 22
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.85 E-value=1.7e-19 Score=203.32 Aligned_cols=252 Identities=15% Similarity=0.162 Sum_probs=173.7
Q ss_pred cccceeeeccccc--CCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCC
Q psy14257 247 SLKNTIALDFYYT--PTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSN 324 (841)
Q Consensus 247 ~~~~~~avd~~~~--~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~ 324 (841)
.+..+.+|.|+.. .+. |||+|.. ++|+++++.++. .. .+...+..|.+||+|+.++ +|++|++..
T Consensus 137 ~~~~P~gvavd~~s~~g~--Lyv~D~~-~~I~~id~~~g~---v~-~~~~~~~~P~giavd~dG~---lyVad~~~~--- 203 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDD--LYWVGQR-DAFRHVDFVNQY---VD-IKTTNIGQCADVNFTLNGD---MVVVDDQSS--- 203 (433)
T ss_dssp CCSCCCEEEECTTTTTCE--EEEECBT-SCEEEEETTTTE---EE-EECCCCSCEEEEEECTTCC---EEEEECCSC---
T ss_pred ccCCCceEEEccccCCCE--EEEEeCC-CCEEEEECCCCE---EE-EeecCCCCccEEEECCCCC---EEEEcCCCC---
Confidence 3566888888873 556 9999998 899999886654 22 3345778899999998764 566665431
Q ss_pred CCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCC
Q psy14257 325 SSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCR 404 (841)
Q Consensus 325 ~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~ 404 (841)
.....|.+...++..........+..|.||++|+.++.|||+|...++|+++++++
T Consensus 204 ~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~------------------------ 259 (433)
T 4hw6_A 204 DTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT------------------------ 259 (433)
T ss_dssp TTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT------------------------
T ss_pred cccceEEEEECCCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC------------------------
Confidence 11124666666555432222336788999999886666666665555555554431
Q ss_pred CCccccccceEEEEecCCCcEEEEccCCceEEEEe-cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC----
Q psy14257 405 PEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLI-AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH---- 479 (841)
Q Consensus 405 ~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~-~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~---- 479 (841)
|...+.+. ......|.+||++|..++||++|.. +++|+++++|+..
T Consensus 260 ---------------------------g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~--~~~I~~~~~d~~~~~~~ 310 (433)
T 4hw6_A 260 ---------------------------GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG--KHCIYRVDYNRETGKLA 310 (433)
T ss_dssp ---------------------------CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--TTEEEEEEBCTTTCCBC
T ss_pred ---------------------------CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--CCEEEEEeCCCCCcccC
Confidence 22211221 1223456789999998889999988 7899999988542
Q ss_pred -cEEEEEe-cc--------cCCCCCCceeEEE---------eccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC-----
Q psy14257 480 -RSVIVRV-DL--------LTSRGAWPNGLTL---------DYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH----- 535 (841)
Q Consensus 480 -~~~i~~~-~~--------~~~~~~~P~glal---------D~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~----- 535 (841)
...+... +. ....+..|.||++ | .+++|||+|..+++|++++++|. +.++....
T Consensus 311 ~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd-~~g~lyvaD~~n~~I~~~~~~G~-v~t~~G~g~~~~~ 388 (433)
T 4hw6_A 311 VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE-DEYDFYFCDRDSHTVRVLTPEGR-VTTYAGRGNSREW 388 (433)
T ss_dssp CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS-CCEEEEEEETTTTEEEEECTTSE-EEEEECCCTTCSS
T ss_pred cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC-CCCcEEEEECCCCEEEEECCCCC-EEEEEeCCCCCcc
Confidence 2334331 00 0124788999999 6 67999999999999999999884 44444321
Q ss_pred ----------CCCCcceEEEEe--cCeEEEEeCCCCeEEEEec
Q psy14257 536 ----------DSLTHPFAIALF--ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 536 ----------~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~ 566 (841)
..|.+|.||++. ++.||++|..+++|+++.+
T Consensus 389 G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 389 GYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp CCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred ccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 146789999998 6999999999999998875
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.84 E-value=2.8e-19 Score=201.65 Aligned_cols=250 Identities=14% Similarity=0.106 Sum_probs=183.8
Q ss_pred CCCCccceEEee-ecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCC--
Q psy14257 295 GLSTAEGLAVDW-IGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-- 371 (841)
Q Consensus 295 ~l~~p~giavD~-~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~-- 371 (841)
.+..|.+||+|+ ..++|| ++|.+ ++|.++++++..+..+.. .+..|.+|++|..+++|||+|...+
T Consensus 135 ~~~~P~~lavdp~~~g~Ly--v~d~~--------~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~ 203 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLY--LVGEQ--------HPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNND 203 (430)
T ss_dssp CCSCCCEEEEETTEEEEEE--EEEBT--------EEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTT
T ss_pred CCCCCCEEEECCCCCCeEE--EEeCC--------CcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcc
Confidence 478999999997 444444 55542 599999999877666654 7789999999999999999998544
Q ss_pred --eEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEec-CCCCCcee
Q psy14257 372 --TVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA-GDMESPRA 448 (841)
Q Consensus 372 --~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~-~~l~~P~g 448 (841)
.|..++.+|...... .+..+..+ ..+++|..+++|||+|...++|.++++++.....+.. .....|++
T Consensus 204 ~~~v~~~~~~g~~~~~~-~l~~~~~p--------~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~g 274 (430)
T 3tc9_A 204 RPNNYILTRESGFKVIT-ELTKGQNC--------NGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFH 274 (430)
T ss_dssp SEEEEEEEGGGTSCSEE-EEEECSSC--------CCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEE
T ss_pred cceEEEEeCCCceeeee-eeccCCCc--------eEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCccee
Confidence 566677777654211 11112222 2235666679999999999999999999876644332 33467999
Q ss_pred EEEcCCCCeEEEEecCCCCCeEEEecCCCCC-----cEEEEEe-cc--------cCCCCCCce-eEEEec-------cCC
Q psy14257 449 IALDPRFGLLFWTDWDSKAPRIERCSMSGEH-----RSVIVRV-DL--------LTSRGAWPN-GLTLDY-------QLT 506 (841)
Q Consensus 449 iavd~~~g~Ly~td~~~~~~~I~r~~ldG~~-----~~~i~~~-~~--------~~~~~~~P~-glalD~-------~~~ 506 (841)
||++|...+|||+|.. .++|++++.+|.. ..++... +. ....+..|. |++++. .++
T Consensus 275 ia~~pdG~~lyv~d~~--~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g 352 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVN--QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY 352 (430)
T ss_dssp EEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE
T ss_pred EEEcCCCCEEEEEECC--CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCC
Confidence 9999997789999988 7899999999753 2233331 00 012477899 899963 358
Q ss_pred EEEEEeCCCCeEEEEEcCCCeeEEEEcC--------C------CCCCcceEEEEe--cCeEEEEeCCCCeEEEEec
Q psy14257 507 RIYWIDAKSDSIHTVTYDGKDHHVVLSN--------H------DSLTHPFAIALF--ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 507 ~LYw~d~~~~~I~~~~~dG~~~~~i~~~--------~------~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~ 566 (841)
+|||+|..+++|++++.+|......... . ..|.+|.||++. +++||++|..+++|+++.+
T Consensus 353 ~lyvaD~~n~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 428 (430)
T 3tc9_A 353 DFYFCDRENHCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGY 428 (430)
T ss_dssp EEEEEEGGGTEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred eEEEEECCCcEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEcc
Confidence 9999999999999999988544333321 1 136789999997 4899999999999999875
No 24
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.83 E-value=5.2e-18 Score=181.19 Aligned_cols=261 Identities=10% Similarity=0.184 Sum_probs=191.6
Q ss_pred cceEEEEecC-CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCC-----------CCCeEEEecCCCCC
Q psy14257 412 GKNLYWVESN-LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDS-----------KAPRIERCSMSGEH 479 (841)
Q Consensus 412 ~~~LY~tD~~-~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~-----------~~~~I~r~~ldG~~ 479 (841)
++.||+.... .++|++++.+|+..+.+... .+..|.+ .+++||+++... ....|+++++||+.
T Consensus 25 g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~---~~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 25 DGEVFFSNTNDNGRLYAMNIDGSNIHKLSND---TAMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp TTEEEEEEGGGTTEEEEEETTSCSCEEEEEE---EEEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred CCEEEEEeCCCCceEEEEcCCCCCCEEccCC---ceeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 4899998743 67999999999887666543 3666765 478999998642 14689999999999
Q ss_pred cEEEEEecccCCCCCCceeEEEeccCCEEEEEe---CCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeC
Q psy14257 480 RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWID---AKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDW 556 (841)
Q Consensus 480 ~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d---~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~ 556 (841)
++.+.. . .+.++.+.+++|||++ .....|+++++||+.++.+.... . .| +...+++|||++.
T Consensus 100 ~~~l~~------~----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~--~-~~--~~~~g~~iy~t~~ 164 (302)
T 3s25_A 100 STVLDP------D----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY--L-FT--CNTSDRYFYYNNP 164 (302)
T ss_dssp CEEEEC------S----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC--C-CC--SEEETTEEEEECT
T ss_pred ceEeec------C----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC--c-eE--eeEECCEEEEEeC
Confidence 888765 1 2334455689999999 66789999999999998887653 2 23 4778999999998
Q ss_pred CCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCc
Q psy14257 557 RTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636 (841)
Q Consensus 557 ~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~ 636 (841)
....|++++..+ ...+.+
T Consensus 165 g~~~Iy~~~l~g-~~~~~l------------------------------------------------------------- 182 (302)
T 3s25_A 165 KNGQLYRYDTAS-QSEALF------------------------------------------------------------- 182 (302)
T ss_dssp TTCCEEEEETTT-TEEEEE-------------------------------------------------------------
T ss_pred CCceEEEEECCC-CCEEEE-------------------------------------------------------------
Confidence 667777766421 111111
Q ss_pred eeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCC-CeEEEEEcccCceeeeeeeeeeeec
Q psy14257 637 QFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEY-NEVKRSSIVGGQIQLVVDAVFEFYL 715 (841)
Q Consensus 637 ~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~-~~I~~~~~~g~~~~~~~~~~~~~~~ 715 (841)
+ ... ....++|..+.|||++... ..|+|++++|+.
T Consensus 183 ----~-----------~~~----------------~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~------------- 218 (302)
T 3s25_A 183 ----Y-----------DCN----------------CYKPVVLDDTNVYYMDVNRDNAIVHVNINNPN------------- 218 (302)
T ss_dssp ----E-----------CSC----------------EEEEEEEETTEEEEEEGGGTTEEEEECSSSCC-------------
T ss_pred ----e-----------CCC----------------ccceeeecCCEEEEEEcCCCcEEEEEECCCCC-------------
Confidence 0 000 0011347789999999653 589999999988
Q ss_pred ccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEE
Q psy14257 716 TPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIA 795 (841)
Q Consensus 716 ~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~ia 795 (841)
.++++...+ ..+|+.+++|||+. +.....|+++++||+.|++|..+ +..+|+
T Consensus 219 -------------~~~Lt~~~~-----~~~~~~g~~Iy~~~-~~~~~~i~~~~~DG~~r~~l~~~---------~~~~i~ 270 (302)
T 3s25_A 219 -------------PVVLTEANI-----EHYNVYGSLIFYQR-GGDNPALCVVKNDGTGFKELAKG---------EFCNIN 270 (302)
T ss_dssp -------------CEECSCSCE-----EEEEEETTEEEEEE-CSSSCEEEEEETTSCCCEEEEES---------CEEEEE
T ss_pred -------------eEEEeCCCc-----ceEEECCCEEEEEE-CCCCcEEEEEECCCCccEEeeCC---------ccceEE
Confidence 444443322 34778899999984 44568999999999999988875 334555
Q ss_pred EeCCCCeEEEEecCCCcceEEEEecCCCceEEEec
Q psy14257 796 VWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVS 830 (841)
Q Consensus 796 vd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l~~ 830 (841)
+ ...+|||+|+..+ .|.|+++||+++.+|++
T Consensus 271 i--~~d~Iy~td~~~~--~i~~~~~dGs~~~~l~~ 301 (302)
T 3s25_A 271 V--TSQYVYFTDFVSN--KEYCTSTQNPDTIKALQ 301 (302)
T ss_dssp E--CSSEEEEEETTTC--CEEEEESSSCCSCEECC
T ss_pred E--eCCEEEEEECCCC--eEEEEECCCCCceEecC
Confidence 5 6789999999874 69999999999999875
No 25
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.82 E-value=1.5e-18 Score=195.61 Aligned_cols=261 Identities=17% Similarity=0.200 Sum_probs=182.4
Q ss_pred CcCCCceEEEEc--cCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCC--
Q psy14257 347 NIQWPSSLVIDY--NQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNL-- 422 (841)
Q Consensus 347 ~~~~P~glavD~--~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~-- 422 (841)
.|..|.||++|+ ..+.|||+|.. ++|+++++.+...+.+.. .+..+ ..+++|+.++ |||+|...
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~--~~~~P--------~giavd~dG~-lyVad~~~~~ 204 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTT--NIGQC--------ADVNFTLNGD-MVVVDDQSSD 204 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECC--CCSCE--------EEEEECTTCC-EEEEECCSCT
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeec--CCCCc--------cEEEECCCCC-EEEEcCCCCc
Confidence 688999999998 48999999998 999999996665555432 11111 1235566556 99999753
Q ss_pred --CcEEEEccCCceE-EEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCCCCCCcee
Q psy14257 423 --DQIEVAKLSGQFR-RTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNG 498 (841)
Q Consensus 423 --~~I~v~~~~G~~~-~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~g 498 (841)
..+..+..++... ...+. .+..|.+||+|+..|.|||+|+. +++|+|++++ |...+.+... ....+|.+
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~--~~~V~~~d~~~g~~~~~~~~~----~~~~~~~~ 277 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH--HAMISSYDPATGTLTEEEVMM----DTKGSNFH 277 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT--CSEEEEECTTTCCEEEEEEEC----SCCSSCEE
T ss_pred ccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECC--CCEEEEEECCCCeEEEEEecc----CCCCCccc
Confidence 2355555555432 11222 47899999999988999999988 7899999998 5542444442 34457789
Q ss_pred EEEeccCCEEEEEeCCCCeEEEEEcCCCe-----eEEEEcC------------CCCCCcceEEEE---------e-cCeE
Q psy14257 499 LTLDYQLTRIYWIDAKSDSIHTVTYDGKD-----HHVVLSN------------HDSLTHPFAIAL---------F-ENHV 551 (841)
Q Consensus 499 lalD~~~~~LYw~d~~~~~I~~~~~dG~~-----~~~i~~~------------~~~l~~P~gla~---------~-~~~l 551 (841)
|++|+.+++|||+|..+++|+++++++.. ..++... ...+.+|.+|++ . ++.|
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 99999888899999999999999998531 2334332 124678999999 3 5799
Q ss_pred EEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcc
Q psy14257 552 YWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTC 631 (841)
Q Consensus 552 Y~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC 631 (841)
||+|+.+++|.++++ +|. +..+... +. .+..|+ .|+.
T Consensus 358 yvaD~~n~~I~~~~~-~G~-v~t~~G~---------------------g~---------------~~~~G~---~dG~-- 394 (433)
T 4hw6_A 358 YFCDRDSHTVRVLTP-EGR-VTTYAGR---------------------GN---------------SREWGY---VDGE-- 394 (433)
T ss_dssp EEEETTTTEEEEECT-TSE-EEEEECC---------------------CT---------------TCSSCC---BCEE--
T ss_pred EEEECCCCEEEEECC-CCC-EEEEEeC---------------------CC---------------CCcccc---CCCc--
Confidence 999999999999986 442 2222210 00 011111 0100
Q ss_pred cccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcc
Q psy14257 632 QVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIV 699 (841)
Q Consensus 632 ~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~ 699 (841)
......+..|.+|++|+.++.||++|..+++|+++.++
T Consensus 395 ------------------------------~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 395 ------------------------------LRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ------------------------------TTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ------------------------------cccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 00012457789999999999999999999999999764
No 26
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.82 E-value=6.4e-19 Score=198.71 Aligned_cols=254 Identities=13% Similarity=0.053 Sum_probs=183.5
Q ss_pred ccceeeecccc-cCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCC
Q psy14257 248 LKNTIALDFYY-TPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSS 326 (841)
Q Consensus 248 ~~~~~avd~~~-~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~ 326 (841)
+.++.+|.++. ..+. ||++|.. ++|++++++++. ... +...+..|.+||+|+.++ ++|+++++.. ..
T Consensus 136 ~~~P~~lavdp~~~g~--Lyv~d~~-~~I~~id~~~~~---v~~-~~~~~~~P~~ia~d~~G~--~lyvad~~~~---~~ 203 (430)
T 3tc9_A 136 FGGAVWLSFDPKNHNH--LYLVGEQ-HPTRLIDFEKEY---VST-VYSGLSKVRTICWTHEAD--SMIITNDQNN---ND 203 (430)
T ss_dssp CSCCCEEEEETTEEEE--EEEEEBT-EEEEEEETTTTE---EEE-EECCCSCEEEEEECTTSS--EEEEEECCSC---TT
T ss_pred CCCCCEEEECCCCCCe--EEEEeCC-CcEEEEECCCCE---EEE-EecCCCCcceEEEeCCCC--EEEEEeCCCC---cc
Confidence 56788888886 3555 9999988 899999887653 233 344778999999998653 5666776431 11
Q ss_pred CCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCC
Q psy14257 327 DGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPE 406 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~ 406 (841)
...|.....+|..........+..|.+|++|+.+++|||+|...++|+++++++.....+........+ ..+
T Consensus 204 ~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P--------~gi 275 (430)
T 3tc9_A 204 RPNNYILTRESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWE--------FHI 275 (430)
T ss_dssp SEEEEEEEGGGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCC--------EEE
T ss_pred cceEEEEeCCCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcc--------eeE
Confidence 235777777876553222235889999999998999999999999999999998766444332211111 123
Q ss_pred ccccccceEEEEecCCCcEEEEccCCce-----EEEEecC--------------CCCCce-eEEEcC-------CCCeEE
Q psy14257 407 DNLWIGKNLYWVESNLDQIEVAKLSGQF-----RRTLIAG--------------DMESPR-AIALDP-------RFGLLF 459 (841)
Q Consensus 407 avdw~~~~LY~tD~~~~~I~v~~~~G~~-----~~~l~~~--------------~l~~P~-giavd~-------~~g~Ly 459 (841)
+++..++.|||+|...++|.+++++|.. ..++... .+..|. +++++. ..|.||
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~ly 355 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFY 355 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEE
Confidence 5666667799999999999999998741 2222221 267899 899963 358999
Q ss_pred EEecCCCCCeEEEecCCCCCcEEEEEec------------ccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 460 WTDWDSKAPRIERCSMSGEHRSVIVRVD------------LLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 460 ~td~~~~~~~I~r~~ldG~~~~~i~~~~------------~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
++|++ +++|.+++.+|...+ ++..+ .....|.+|.||++|+.+++||++|..+++|++++++
T Consensus 356 vaD~~--n~~I~~i~~~G~v~~-~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 356 FCDRE--NHCIRILTPQGRVTT-FAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEGG--GTEEEEECTTSEEEE-EEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEECC--CcEEEEECCCCcEEE-EEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 99998 899999998884333 33210 0112377999999998789999999999999999876
No 27
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.81 E-value=4.5e-18 Score=190.69 Aligned_cols=250 Identities=16% Similarity=0.156 Sum_probs=179.8
Q ss_pred ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 248 LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 248 ~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
+..+.+|.|+. +++ |||+|..+++|++++++++. ..++.. ....|. +++++.++ ++||+++.. .
T Consensus 130 ~~~P~~la~d~-~g~--lyv~d~~~~~I~~id~~~g~---~~~~~~-~~~~~~-ia~~~~g~--~l~~~d~~~------~ 193 (409)
T 3hrp_A 130 FKYMWGIAAVG-NNT--VLAYQRDDPRVRLISVDDNK---VTTVHP-GFKGGK-PAVTKDKQ--RVYSIGWEG------T 193 (409)
T ss_dssp CCCEEEEEECS-TTE--EEEEETTTTEEEEEETTTTE---EEEEEE-TCCBCB-CEECTTSS--EEEEEBSST------T
T ss_pred cCCceEEEEeC-CCC--EEEEecCCCcEEEEECCCCE---EEEeec-cCCCCc-eeEecCCC--cEEEEecCC------C
Confidence 55688888874 355 99999999999999987654 334433 356788 99998664 566776532 1
Q ss_pred CCEEEEccCCCcccccc----ccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCC
Q psy14257 328 GGIEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNC 403 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~----~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~ 403 (841)
.+|.+++.++....... ......|.++++|+.+++||++|. .++|+++++++...+.+......+.. +. ..
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~---~~-~P 268 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSL---GT-NP 268 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCC---CC-SS
T ss_pred ceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCC---CC-Cc
Confidence 28999998765542222 226789999999998999999886 78999999998765554332211110 00 00
Q ss_pred C-CCccccccceEEEEecCCCcEEEEccCCceEEEEecCC--------------CCCceeEEEcCCCCeEEEEec-CCCC
Q psy14257 404 R-PEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGD--------------MESPRAIALDPRFGLLFWTDW-DSKA 467 (841)
Q Consensus 404 ~-~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~--------------l~~P~giavd~~~g~Ly~td~-~~~~ 467 (841)
. .++++..+++|||+|..+++|.+++++|..... .... +..|.+|++|+. |.||++|+ + +
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~-~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~--~ 344 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWF-CGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFK--G 344 (409)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEE-EECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTT--T
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEE-EeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCC--C
Confidence 1 245666679999999999999999999984433 3322 678999999987 77999998 7 7
Q ss_pred CeEEEecC-CCCCcEEEEEecc---------cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 468 PRIERCSM-SGEHRSVIVRVDL---------LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 468 ~~I~r~~l-dG~~~~~i~~~~~---------~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
++|.++++ +|. ...+..... ....+..|.||++|+. ++||++|..+++|+++.++
T Consensus 345 ~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 345 YCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp CEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred CEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 89999994 554 334433100 0013788999999975 9999999999999999764
No 28
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.81 E-value=1.1e-17 Score=187.67 Aligned_cols=250 Identities=12% Similarity=0.062 Sum_probs=179.8
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCC-eE
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TV 373 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~-~I 373 (841)
.+..|.+||+|+.+ + +||+|. .+++|.++++++..+..+... ...|. +++++.++.|||+|...+ +|
T Consensus 129 ~~~~P~~la~d~~g-~--lyv~d~-------~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I 196 (409)
T 3hrp_A 129 KFKYMWGIAAVGNN-T--VLAYQR-------DDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTV 196 (409)
T ss_dssp CCCCEEEEEECSTT-E--EEEEET-------TTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEE
T ss_pred ccCCceEEEEeCCC-C--EEEEec-------CCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceE
Confidence 47799999999543 4 555654 345999999997766665443 56678 999999999999999665 99
Q ss_pred EEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEE----ecCC-CCCce-
Q psy14257 374 ESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTL----IAGD-MESPR- 447 (841)
Q Consensus 374 ~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l----~~~~-l~~P~- 447 (841)
++++.++......... .... .......++++..++.||+++. .++|.++++++.....+ .... ...|.
T Consensus 197 ~~~d~~~~~~~~~~g~--~~~~---~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~ 270 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQ--LGST---FSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGP 270 (409)
T ss_dssp EEEEGGGTTCEEEEEE--CCTT---SCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCC
T ss_pred EEEEcCCCceeEEeee--ccch---hcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccc
Confidence 9999987665322210 0000 0011123466777799999886 68999999987765554 2211 23477
Q ss_pred eEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec-c--------cCCCCCCceeEEEeccCCEEEEEeC-CCCe
Q psy14257 448 AIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD-L--------LTSRGAWPNGLTLDYQLTRIYWIDA-KSDS 517 (841)
Q Consensus 448 giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~-~--------~~~~~~~P~glalD~~~~~LYw~d~-~~~~ 517 (841)
+|+++|.+|.||++|.. .++|++++++|. ...+.... . ....+..|.||++|+. ++||++|. .+++
T Consensus 271 ~ia~~p~~g~lyv~d~~--~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d-G~lyvad~~~~~~ 346 (409)
T 3hrp_A 271 YLIYYFVDSNFYMSDQN--LSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED-GNFYIVDGFKGYC 346 (409)
T ss_dssp EEEEETTTTEEEEEETT--TTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT-CCEEEEETTTTCE
T ss_pred cEEEeCCCCEEEEEeCC--CCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC-CCEEEEeCCCCCE
Confidence 99999988999999987 789999999997 33333310 0 0012778999999965 67999999 9999
Q ss_pred EEEEEcCCCeeEEEEcCC------------CCCCcceEEEEec-CeEEEEeCCCCeEEEEec
Q psy14257 518 IHTVTYDGKDHHVVLSNH------------DSLTHPFAIALFE-NHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 518 I~~~~~dG~~~~~i~~~~------------~~l~~P~gla~~~-~~lY~td~~~~~i~~~~~ 566 (841)
|+++++....+.++.... ..+..|.+|++.. +.||++|+.+++|+++..
T Consensus 347 I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 347 LRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 999994444455554431 1367899999965 999999999999998864
No 29
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.81 E-value=7.6e-18 Score=189.53 Aligned_cols=252 Identities=13% Similarity=0.109 Sum_probs=185.1
Q ss_pred CCCCCccceEEee-ecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc---CcCCCceEEE-------EccCCE
Q psy14257 294 TGLSTAEGLAVDW-IGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK---NIQWPSSLVI-------DYNQDI 362 (841)
Q Consensus 294 ~~l~~p~giavD~-~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~---~~~~P~glav-------D~~~~~ 362 (841)
..+..|.+|++|| ..++||+.+. . .++|.++++.+..+.++... .+..|.+|++ |.++++
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~--~-------~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYD--G-------HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEE--T-------EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCE
T ss_pred cccCCCCEEEEccCCCCEEEEEEC--C-------CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCE
Confidence 4577899999998 4667777543 2 24899999998888877644 4678999999 999999
Q ss_pred EEEEeCCCC------eEEEEEecC--Ccc-----EEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEc
Q psy14257 363 LYWCDSHLN------TVESVRVDG--SER-----TVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAK 429 (841)
Q Consensus 363 lYwaD~~~~------~I~~~~ldG--~~~-----~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~ 429 (841)
||++|...+ .|..++.+. .-. ..+. .+.. +..++++..++.||++|...++|.+++
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~---~~~~--------p~giavdp~~g~LYvtd~~~g~V~r~d 275 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA---AYKQ--------CNGATIHPINGELYFNSYEKGQVFRLD 275 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE---EESC--------CCCEEECTTTCCEEEEETTTTEEEEEC
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeec---cCCC--------ceEEEEcCCCCeEEEEECCCCEEEEEe
Confidence 999999763 477775443 332 1221 1222 223356677799999999999999999
Q ss_pred cC--------Cce-----------EEEEe-cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-----EEEE
Q psy14257 430 LS--------GQF-----------RRTLI-AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-----SVIV 484 (841)
Q Consensus 430 ~~--------G~~-----------~~~l~-~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-----~~i~ 484 (841)
++ |.. .+.+. ......|++||++|..++||++|+. +++|+|+++||... .+++
T Consensus 276 ~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~--~h~I~kid~dg~~~~~~~~~~~a 353 (496)
T 3kya_A 276 LVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN--NHYFMRSDYDEIKKEFITPYNFV 353 (496)
T ss_dssp HHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEECCCEEEE
T ss_pred cccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC--CCEEEEEecCCCcceecccEEec
Confidence 97 332 12222 2234679999999998889999988 89999999998653 3444
Q ss_pred Ee-cc--------cCCCCCCce-eEEEec------cCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC-------------
Q psy14257 485 RV-DL--------LTSRGAWPN-GLTLDY------QLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH------------- 535 (841)
Q Consensus 485 ~~-~~--------~~~~~~~P~-glalD~------~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~------------- 535 (841)
.. +. ....|..|. |+++|. .++.||++|..+++|++++++|. +.+++...
T Consensus 354 G~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~ 432 (496)
T 3kya_A 354 GGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGT 432 (496)
T ss_dssp EBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCC
T ss_pred CCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCCC-EEEEecccccccccCcccccc
Confidence 32 10 013578899 888873 46899999999999999999984 55554321
Q ss_pred --------CCCCcceEEEEec--CeEEEEeCCCCeEEEEeccC
Q psy14257 536 --------DSLTHPFAIALFE--NHVYWTDWRTNSVIRANKWN 568 (841)
Q Consensus 536 --------~~l~~P~gla~~~--~~lY~td~~~~~i~~~~~~~ 568 (841)
..|.+|.||++.. +.||++|..+++|+++....
T Consensus 433 ~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 433 DDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp CCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred CCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 1477899999974 89999999999999998643
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.77 E-value=1.5e-16 Score=169.09 Aligned_cols=279 Identities=14% Similarity=0.172 Sum_probs=195.6
Q ss_pred ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 248 LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 248 ~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
...+.+|.++.. +. ||+++...+.|.+.+.. +.+ ....+...+..|.+|++|+.+ ++| +++. ..
T Consensus 19 ~~~p~~i~~d~~-g~--l~v~~~~~~~v~~~~~~-~~~--~~~~~~~~~~~~~~i~~~~~g-~l~--v~~~-------~~ 82 (300)
T 2qc5_A 19 DSGPYGITSSED-GK--VWFTQHKANKISSLDQS-GRI--KEFEVPTPDAKVMCLIVSSLG-DIW--FTEN-------GA 82 (300)
T ss_dssp TCCEEEEEECTT-SC--EEEEETTTTEEEEECTT-SCE--EEEECSSTTCCEEEEEECTTS-CEE--EEET-------TT
T ss_pred CCCcceeeECCC-CC--EEEEcCCCCeEEEECCC-Cce--EEEECCCCCCcceeEEECCCC-CEE--EEec-------CC
Confidence 455667766654 55 99999888999999876 432 122223345789999999532 444 4443 24
Q ss_pred CCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 328 GGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
++|.+++.+|+............|.+|++|+ .++||+++...+.|.+++.+|........ .. ...+.+ ++
T Consensus 83 ~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~-~~--~~~~~~------i~ 152 (300)
T 2qc5_A 83 NKIGKLSKKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLP-NK--GSYPAF------IT 152 (300)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECS-ST--TCCEEE------EE
T ss_pred CeEEEECCCCCeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccCC-CC--CCCcee------EE
Confidence 5899999886643222223457899999996 57899999988999999998544322111 00 000111 12
Q ss_pred cccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD 487 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~ 487 (841)
+|. .++||+++...+.|.+++.+|+.........+..|.+|++|+. |.||+++.. .+.|.+++.+|........
T Consensus 153 ~d~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~--~~~i~~~~~~g~~~~~~~~-- 226 (300)
T 2qc5_A 153 LGS-DNALWFTENQNNSIGRITNTGKLEEYPLPTNAAAPVGITSGND-GALWFVEIM--GNKIGRITTTGEISEYDIP-- 226 (300)
T ss_dssp ECT-TSSEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETT--TTEEEEECTTCCEEEEECS--
T ss_pred ECC-CCCEEEEecCCCeEEEECCCCcEEEeeCCCCCCCcceEEECCC-CCEEEEccC--CCEEEEEcCCCcEEEEECC--
Confidence 232 2679999988899999999888766444455678999999984 799999977 6789999997654432221
Q ss_pred ccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 488 LLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 488 ~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~ 566 (841)
.....|.+|++|+. ++||+++...+.|.+++++|........ .....|.+|++. ++.||+++. + .|.++++
T Consensus 227 ---~~~~~~~~i~~d~~-g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 227 ---TPNARPHAITAGKN-SEIWFTEWGANQIGRITNDNTIQEYQLQ--TENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp ---STTCCEEEEEECST-TCEEEEETTTTEEEEECTTSCEEEEECC--STTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred ---CCCCCceEEEECCC-CCEEEeccCCCeEEEECCCCcEEEEECC--ccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 35678999999964 7899999888999999998765433222 225679999996 589999998 6 8888875
No 31
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=1.4e-17 Score=187.36 Aligned_cols=260 Identities=12% Similarity=0.054 Sum_probs=182.3
Q ss_pred ccceeeecccc-cCCcceeEEEecCCCeEEEEEecCCcccceEEEEeC---CCCCccceEE-------eeecCceeEEEe
Q psy14257 248 LKNTIALDFYY-TPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQT---GLSTAEGLAV-------DWIGKNLYMFWA 316 (841)
Q Consensus 248 ~~~~~avd~~~-~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~---~l~~p~giav-------D~~~~~~y~~~t 316 (841)
+..+.+|.++. ..++ ||+++...++|.++++.++. ..+++.. ++..|.+||+ |..++ +||.+
T Consensus 138 ~~~p~~la~dp~~~~~--Lyv~~~~~~~i~~ID~~~~~---v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~--~lyva 210 (496)
T 3kya_A 138 FSDNGRLAFDPLNKDH--LYICYDGHKAIQLIDLKNRM---LSSPLNINTIPTNRIRSIAFNKKIEGYADEAE--YMIVA 210 (496)
T ss_dssp CCSEEEEEEETTEEEE--EEEEEETEEEEEEEETTTTE---EEEEECCTTSSCSBEEEEEECCCBTTTBCTTC--EEEEE
T ss_pred cCCCCEEEEccCCCCE--EEEEECCCCeEEEEECCCCE---EEEEEccCccccCCCcEEEEeecccccCCCCC--EEEEE
Confidence 45677888886 3455 99999888899999988764 3344433 3457999999 87664 56677
Q ss_pred eecCCCCCCCCCCEEEEc--cCCCccc----cccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEec-------CCcc
Q psy14257 317 FWSLSPSNSSDGGIEKAG--MHGENRS----PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-------GSER 383 (841)
Q Consensus 317 d~~~~~~~~~~~~I~~~~--~dG~~~~----~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ld-------G~~~ 383 (841)
++.... ......|..+. .+|.... ..+. .+.+|.||++|+.+++||++|...++|++++++ +...
T Consensus 211 d~~~~~-~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~ 288 (496)
T 3kya_A 211 IDYDGK-GDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGS 288 (496)
T ss_dssp ECCCTT-GGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCC
T ss_pred eCCCCC-cccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCcee
Confidence 765310 01123477774 3445431 1222 578999999999999999999999999999998 3332
Q ss_pred ------------EEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceE-----EEEec------
Q psy14257 384 ------------TVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFR-----RTLIA------ 440 (841)
Q Consensus 384 ------------~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~-----~~l~~------ 440 (841)
+.++.... ...+. .++++..++.||++|..+++|+++++++... .++..
T Consensus 289 ~tp~~~~~~g~~~~l~~~~~--~~~p~------~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G 360 (496)
T 3kya_A 289 WDPIVKNNPNTFKQLFTIAD--PSWEF------QIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSG 360 (496)
T ss_dssp CCCBGGGCTTTEEEEEECSS--SSCCE------EEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCC
T ss_pred ecccccccccccceeEecCC--CCCce------EEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCc
Confidence 23322111 01111 1356666677999999999999999887531 23332
Q ss_pred --------CCCCCce-eEEEcC------CCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc-----------------
Q psy14257 441 --------GDMESPR-AIALDP------RFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL----------------- 488 (841)
Q Consensus 441 --------~~l~~P~-giavd~------~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~----------------- 488 (841)
..|.+|. +++++. ..|.||++|++ +++|.+++.+|. ..+++..+.
T Consensus 361 ~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~--N~rIr~i~~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~ 437 (496)
T 3kya_A 361 YRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL--NFCVRKVTPEGI-VSTYAGRGASTSLADGNQWGTDDGDL 437 (496)
T ss_dssp CBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG--GTEEEEECTTCB-EEEEEESCTTHHHHHSCSCCCCCEET
T ss_pred ccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC--CCEEEEEeCCCC-EEEEecccccccccCccccccCCCCc
Confidence 1367899 888873 46899999998 899999999984 344443211
Q ss_pred -cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe
Q psy14257 489 -LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD 527 (841)
Q Consensus 489 -~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~ 527 (841)
....|..|.||++|..++.||++|..+++|+++++++..
T Consensus 438 ~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 438 REVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp TTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred hhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 112578999999997679999999999999999998864
No 32
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.77 E-value=1.1e-16 Score=174.18 Aligned_cols=262 Identities=18% Similarity=0.105 Sum_probs=179.3
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCC-----------------CCCCCCEEEEccC-CCccccccccCcCCCceEEE
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPS-----------------NSSDGGIEKAGMH-GENRSPLVTKNIQWPSSLVI 356 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~-----------------~~~~~~I~~~~~d-G~~~~~l~~~~~~~P~glav 356 (841)
.+..|.|||+|+.+ ++| +++.+.... -...++|.+++.+ |+..+.+....+..|.||++
T Consensus 22 ~l~~v~~va~d~~G-~l~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 22 LPGQVSGVALDSKN-NLV--IFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp CCSCEEEEEECTTC-CEE--EEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEE
T ss_pred ecCCceEEEECCCC-CEE--EEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEE
Confidence 46678999999653 555 454433100 0123579999986 76655555567889999999
Q ss_pred EccCCEEEEEeCCCCeEEEEEecCCc--cEEEEeeeeecCCCccccCCCCCCccccccceEEEEec-CCCcEEEEccCCc
Q psy14257 357 DYNQDILYWCDSHLNTVESVRVDGSE--RTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVES-NLDQIEVAKLSGQ 433 (841)
Q Consensus 357 D~~~~~lYwaD~~~~~I~~~~ldG~~--~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~-~~~~I~v~~~~G~ 433 (841)
|++++ ||++|...++|++++++|.. ...+......+.. ...+.....+++|..+++||++|. ..++|.+++.+|.
T Consensus 99 d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~-~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 99 DTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSD-QNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp CTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCS-TTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred CCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCC-ccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 97655 99999999999999999873 3333211100000 000001112355655799999997 7999999999999
Q ss_pred eEEEEec---------CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCCCCCCceeEEEec
Q psy14257 434 FRRTLIA---------GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNGLTLDY 503 (841)
Q Consensus 434 ~~~~l~~---------~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~glalD~ 503 (841)
...++.. ..+..|.+||+||..|.||++|++ +.+|.+++++ |+....+... .....|.++++.+
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~--~~~I~~~~~~~G~~~~~~~~~----~~~~~~~~~~~~p 250 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE--NGRIQCFKTDTKEFVREIKHA----SFGRNVFAISYIP 250 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--TTEEEEEETTTCCEEEEECCT----TTTTCEEEEEEET
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--CCEEEEEECCCCcEEEEEecc----ccCCCcceeeecC
Confidence 8877653 235679999999988999999988 7899999998 7655544321 1223344444443
Q ss_pred -----cCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEecc
Q psy14257 504 -----QLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 504 -----~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~ 567 (841)
.++++|+++....+|..+++. |....++......+..|.+|++. ++.||++|..+++|.+++..
T Consensus 251 g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 251 GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 235566666777799999965 55555443333457889999995 47999999999999988764
No 33
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.76 E-value=7.8e-16 Score=163.54 Aligned_cols=268 Identities=15% Similarity=0.197 Sum_probs=185.0
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
++||+++...+.|.+++.+|+.....+...+..|.+|++|+. |.||+++.. .++|.+.+.+|... .+.. ...
T Consensus 31 g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~--~~~v~~~d~~g~~~-~~~~----~~~ 102 (300)
T 2qc5_A 31 GKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSL-GDIWFTENG--ANKIGKLSKKGGFT-EYPL----PQP 102 (300)
T ss_dssp SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTT-SCEEEEETT--TTEEEEECTTSCEE-EEEC----SST
T ss_pred CCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCC-CCEEEEecC--CCeEEEECCCCCeE-EecC----CCC
Confidence 455555555556666666644444333344578999999964 789999976 67999999985542 2221 124
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
...|.+|++|+ +++||+++...+.|.+++++|........ .....|.+|++. ++.||+++...+.|.+++. +|+.
T Consensus 103 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 103 DSGPYGITEGL-NGDIWFTQLNGDRIGKLTADGTIYEYDLP--NKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL 178 (300)
T ss_dssp TCCEEEEEECS-TTCEEEEETTTTEEEEECTTSCEEEEECS--STTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCccceECC-CCCEEEEccCCCeEEEECCCCCEEEccCC--CCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE
Confidence 57899999995 68999999888899999999665533322 235689999995 4789999987777777764 2221
Q ss_pred eEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEe
Q psy14257 572 VTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVD 651 (841)
Q Consensus 572 ~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~ 651 (841)
.. + .
T Consensus 179 ~~-~---------------------------------------------------------------------------~ 182 (300)
T 2qc5_A 179 EE-Y---------------------------------------------------------------------------P 182 (300)
T ss_dssp EE-E---------------------------------------------------------------------------E
T ss_pred EE-e---------------------------------------------------------------------------e
Confidence 10 0 0
Q ss_pred cCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEE
Q psy14257 652 LEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQL 731 (841)
Q Consensus 652 l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (841)
+. .....|.+|++|+ ++.||+++...+.|.+++.+|.. ...
T Consensus 183 ~~------------~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~~g~~--------------------------~~~ 223 (300)
T 2qc5_A 183 LP------------TNAAAPVGITSGN-DGALWFVEIMGNKIGRITTTGEI--------------------------SEY 223 (300)
T ss_dssp CS------------STTCCEEEEEECT-TSSEEEEETTTTEEEEECTTCCE--------------------------EEE
T ss_pred CC------------CCCCCcceEEECC-CCCEEEEccCCCEEEEEcCCCcE--------------------------EEE
Confidence 00 0113456788886 56899999888899999886543 222
Q ss_pred EeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCC
Q psy14257 732 VVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ 811 (841)
Q Consensus 732 i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~ 811 (841)
.+......|.+|++|..+ +||++ +...++|.+++++|......+.. ....|.+|++|+. |.||+++. .
T Consensus 224 ~~~~~~~~~~~i~~d~~g-~l~v~--~~~~~~i~~~~~~g~~~~~~~~~------~~~~~~~i~~~~~-g~l~v~~~-~- 291 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNS-EIWFT--EWGANQIGRITNDNTIQEYQLQT------ENAEPHGITFGKD-GSVWFALK-C- 291 (300)
T ss_dssp ECSSTTCCEEEEEECSTT-CEEEE--ETTTTEEEEECTTSCEEEEECCS------TTCCCCCEEECTT-SCEEEECS-S-
T ss_pred ECCCCCCCceEEEECCCC-CEEEe--ccCCCeEEEECCCCcEEEEECCc------cCCccceeEeCCC-CCEEEEcc-C-
Confidence 233456789999999875 69999 45678999999987665443331 1578999999986 88999987 3
Q ss_pred cceEEEEecC
Q psy14257 812 VVTIEMAFMD 821 (841)
Q Consensus 812 ~~~I~~~~~d 821 (841)
+|.+.+.+
T Consensus 292 --~i~~~~p~ 299 (300)
T 2qc5_A 292 --KIGKLNLN 299 (300)
T ss_dssp --EEEEEEEC
T ss_pred --ceEEeCCC
Confidence 37776653
No 34
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.76 E-value=3.3e-17 Score=171.93 Aligned_cols=238 Identities=17% Similarity=0.285 Sum_probs=167.1
Q ss_pred ceeeecccccCCcceeEE-EecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFW-TDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw-~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
.+.++.++.. ++ ||+ ++...+.|.+.+..++. ...+...++..|.+|++|+.+ ++| +++. .+
T Consensus 25 ~p~~i~~~~~-g~--l~v~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~p~~i~~~~~g-~l~--v~~~--------~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSA-GN--VYVTSEGMYGRVVKLATGSTG---TTVLPFNGLYQPQGLAVDGAG-TVY--VTDF--------NN 87 (270)
T ss_dssp CEEEEEECTT-CC--EEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECTTC-CEE--EEET--------TT
T ss_pred CccceEECCC-CC--EEEEccCCCCcEEEecCCCcc---cceEeeCCcCCcceeEECCCC-CEE--EEcC--------CC
Confidence 6777777654 45 999 98889999998764432 222223455789999999743 444 4442 35
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcc
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN 408 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~av 408 (841)
+|.+++.+|.....+....+..|.+|++|+. ++||+++...
T Consensus 88 ~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~~-------------------------------------- 128 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQ-GAVYVADRGN-------------------------------------- 128 (270)
T ss_dssp EEEEECTTCSCCEECCCCSCSSEEEEEECTT-CCEEEEEGGG--------------------------------------
T ss_pred EEEEEeCCCceEeeeecCCcCCCcceEECCC-CCEEEEECCC--------------------------------------
Confidence 8999999988766555556778999999874 3455555443
Q ss_pred ccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 409 LWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 409 dw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
+.|.+++.............+..|.+|++++. |.||+++.. ..+|.++++++........
T Consensus 129 --------------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~--~~~i~~~~~~~~~~~~~~~--- 188 (270)
T 1rwi_B 129 --------------NRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS-GNVYVTDTD--NNRVVKLEAESNNQVVLPF--- 188 (270)
T ss_dssp --------------TEEEEECTTCCSCEECCCCSCCSCCCEEECTT-CCEEEEEGG--GTEEEEECTTTCCEEECCC---
T ss_pred --------------CEEEEEECCCceeEeeccccCCCceeEEEeCC-CCEEEEECC--CCEEEEEecCCCceEeecc---
Confidence 34444432222111112234578999999985 679999987 6899999998876544322
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEecc
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~ 567 (841)
..+..|.+|++|+. ++||+++...++|.++++++.....+.. ..+..|.+|++. ++.||+++..+++|..+++.
T Consensus 189 --~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~--~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~ 263 (270)
T 1rwi_B 189 --TDITAPWGIAVDEA-GTVYVTEHNTNQVVKLLAGSTTSTVLPF--TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSL 263 (270)
T ss_dssp --SSCCSEEEEEECTT-CCEEEEETTTSCEEEECTTCSCCEECCC--CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCC
T ss_pred --cCCCCceEEEECCC-CCEEEEECCCCcEEEEcCCCCcceeecc--CCCCCceeEEECCCCCEEEEECCCCEEEEEcCC
Confidence 45678999999964 6999999989999999999876654322 225689999996 57899999999999888764
Q ss_pred C
Q psy14257 568 N 568 (841)
Q Consensus 568 ~ 568 (841)
.
T Consensus 264 ~ 264 (270)
T 1rwi_B 264 E 264 (270)
T ss_dssp G
T ss_pred C
Confidence 3
No 35
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.75 E-value=1.6e-16 Score=172.18 Aligned_cols=249 Identities=10% Similarity=0.037 Sum_probs=175.4
Q ss_pred EeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccc-------------------cCcCCCc
Q psy14257 292 VQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVT-------------------KNIQWPS 352 (841)
Q Consensus 292 ~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~-------------------~~~~~P~ 352 (841)
+...+..|+++++|+.+ ++| |++ ...++|.+++.++...+.+.. .....|.
T Consensus 14 ~~g~~~~p~~i~~d~~g-~~l--~v~-------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ 83 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTN-KGF--YTS-------VQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY 83 (322)
T ss_dssp EECSSSCCCCEECCTTC-SSE--EEE-------CTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE
T ss_pred cCCccCCceEEEEcCCC-CEE--EEE-------cCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc
Confidence 34457899999999653 433 333 235699999988765443321 1245799
Q ss_pred eEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecC-----------
Q psy14257 353 SLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN----------- 421 (841)
Q Consensus 353 glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~----------- 421 (841)
||++|..+++||++|... .|.++++++...+.+..... ......+ ..+++|...++||++|..
T Consensus 84 gi~~~~~~g~l~v~d~~~-~i~~~d~~~g~~~~~~~~~~---~~~~~~p--~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 84 DISYNLQNNQLYIVDCYY-HLSVVGSEGGHATQLATSVD---GVPFKWL--YAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp EEEEETTTTEEEEEETTT-EEEEECTTCEECEEEESEET---TEECSCE--EEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred eEEEcCCCCcEEEEECCC-CEEEEeCCCCEEEEecccCC---CCccccc--ceEEEecCCCEEEEECCccccccccccee
Confidence 999998779999999874 58899888665555432210 0000000 112444434799999965
Q ss_pred ------CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC---CcEEEEEecccCCC
Q psy14257 422 ------LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE---HRSVIVRVDLLTSR 492 (841)
Q Consensus 422 ------~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~---~~~~i~~~~~~~~~ 492 (841)
.++|.+++.++...+++. ..+..|+||++++..++||+++.. ..+|+++++++. ..+.+.. ..
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~--~~~I~~~~~~~~~~~~~~~~~~-----~~ 229 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFL--SHQIVKYWLEGPKKGTAEVLVK-----IP 229 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGG--GTEEEEEESSSTTTTCEEEEEE-----CS
T ss_pred hcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCC--CCeEEEEECCCCcCCccceEEe-----CC
Confidence 267888888765554443 356889999999987889999987 789999999873 3344433 11
Q ss_pred CCCceeEEEeccCCEEEEEeCC----------CCeEEEEEcCCCeeEEEEcCCCC-CCcceEEEEecCeEEEEeCCCCeE
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAK----------SDSIHTVTYDGKDHHVVLSNHDS-LTHPFAIALFENHVYWTDWRTNSV 561 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~----------~~~I~~~~~dG~~~~~i~~~~~~-l~~P~gla~~~~~lY~td~~~~~i 561 (841)
. |.||++|. +++||+++.. .++|.+++++|.....+....+. +..|.+++..+++||+++..++.|
T Consensus 230 -g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 230 -N-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSV 306 (322)
T ss_dssp -S-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEE
T ss_pred -C-CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCce
Confidence 2 99999996 5789999875 57899999999877776544322 567888888889999999999999
Q ss_pred EEEecc
Q psy14257 562 IRANKW 567 (841)
Q Consensus 562 ~~~~~~ 567 (841)
.+++..
T Consensus 307 ~~~~~~ 312 (322)
T 2fp8_A 307 GILVYD 312 (322)
T ss_dssp EEEEC-
T ss_pred EEEecc
Confidence 998753
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=5.2e-15 Score=157.03 Aligned_cols=270 Identities=13% Similarity=0.187 Sum_probs=182.2
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
++||+++...+.|.+++++|.............|.+|++|+. |.||+++.. .+.|.+.+.+|... .+.. +..
T Consensus 26 g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~--~~~i~~~~~~g~~~-~~~~----~~~ 97 (299)
T 2z2n_A 26 GKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSD-GEVWFTENA--ANKIGRITKKGIIK-EYTL----PNP 97 (299)
T ss_dssp SCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SCEEEEETT--TTEEEEECTTSCEE-EEEC----SST
T ss_pred CCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCC-CCEEEeCCC--CCeEEEECCCCcEE-EEeC----CCc
Confidence 455555554556666666644433333334578999999975 889999876 67899999986532 2221 124
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
...|.+|++|+ +++||+++...+.|.+++++|........ .....|.+|++. +++||+++...+.|.+++. +|+.
T Consensus 98 ~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 98 DSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELP--NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECS--STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCC--CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 56899999995 67999999888999999997765543332 225679999996 5799999887777777664 3221
Q ss_pred eEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEe
Q psy14257 572 VTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVD 651 (841)
Q Consensus 572 ~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~ 651 (841)
.. +.
T Consensus 174 ~~----------------------------------------------------------------------------~~ 177 (299)
T 2z2n_A 174 TE----------------------------------------------------------------------------FK 177 (299)
T ss_dssp EE----------------------------------------------------------------------------EE
T ss_pred EE----------------------------------------------------------------------------ee
Confidence 10 00
Q ss_pred cCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEE
Q psy14257 652 LEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQL 731 (841)
Q Consensus 652 l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (841)
+. .....|.+|++|+. +.||+++...+.|.+++.+|.. ...
T Consensus 178 ~~------------~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~g~~--------------------------~~~ 218 (299)
T 2z2n_A 178 IP------------TPASGPVGITKGND-DALWFVEIIGNKIGRITTSGEI--------------------------TEF 218 (299)
T ss_dssp CS------------STTCCEEEEEECTT-SSEEEEETTTTEEEEECTTCCE--------------------------EEE
T ss_pred CC------------CCCCcceeEEECCC-CCEEEEccCCceEEEECCCCcE--------------------------EEE
Confidence 00 01123567788865 5689999888899999884432 111
Q ss_pred EeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCC
Q psy14257 732 VVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ 811 (841)
Q Consensus 732 i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~ 811 (841)
.+......|.+|++|..+ +||++ +...+.|.+++++|..+...+.. ....|.+|++ ..|.||+++...
T Consensus 219 ~~~~~~~~~~~i~~~~~g-~l~v~--~~~~~~i~~~d~~g~~~~~~~~~------~~~~~~~i~~--~~g~l~v~~~~~- 286 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGI-DLWFT--EWGANKIGRLTSNNIIEEYPIQI------KSAEPHGICF--DGETIWFAMECD- 286 (299)
T ss_dssp ECSSTTCCEEEEEECSTT-CEEEE--ETTTTEEEEEETTTEEEEEECSS------SSCCEEEEEE--CSSCEEEEETTT-
T ss_pred ECCCCCCCceeEEECCCC-CEEEe--ccCCceEEEECCCCceEEEeCCC------CCCccceEEe--cCCCEEEEecCC-
Confidence 122356789999999875 69999 44678999999987654433332 1578999999 568999998643
Q ss_pred cceEEEEecCCC
Q psy14257 812 VVTIEMAFMDGT 823 (841)
Q Consensus 812 ~~~I~~~~~dG~ 823 (841)
.|.+.+.+..
T Consensus 287 --~l~~~~~~~~ 296 (299)
T 2z2n_A 287 --KIGKLTLIKD 296 (299)
T ss_dssp --EEEEEEEC--
T ss_pred --cEEEEEcCcc
Confidence 5888876543
No 37
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.74 E-value=1.2e-15 Score=161.96 Aligned_cols=281 Identities=13% Similarity=0.127 Sum_probs=192.5
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEE-eCCCCCccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVV-QTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~-~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
..+.++.++.. +. ||+++...+.|.+.++. +. ..... ......|.+|++|+.+ ++| +++. ..
T Consensus 15 ~~~~~i~~d~~-g~--l~v~~~~~~~v~~~d~~-~~---~~~~~~~~~~~~~~~i~~~~~g-~l~--v~~~-------~~ 77 (299)
T 2z2n_A 15 TGPYGITVSDK-GK--VWITQHKANMISCINLD-GK---ITEYPLPTPDAKVMCLTISSDG-EVW--FTEN-------AA 77 (299)
T ss_dssp CCEEEEEECTT-SC--EEEEETTTTEEEEECTT-CC---EEEEECSSTTCCEEEEEECTTS-CEE--EEET-------TT
T ss_pred CCccceEECCC-CC--EEEEecCCCcEEEEcCC-CC---eEEecCCcccCceeeEEECCCC-CEE--EeCC-------CC
Confidence 45666666654 55 99998888899999876 43 22222 2345689999999643 444 4432 24
Q ss_pred CCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 328 GGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
++|.+++.+|+............|.+|++|+ .++||+++...+.|.+++++|........ .. .....+ ++
T Consensus 78 ~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~-~~--~~~~~~------i~ 147 (299)
T 2z2n_A 78 NKIGRITKKGIIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITDDGKIREYELP-NK--GSYPSF------IT 147 (299)
T ss_dssp TEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEEEEECS-ST--TCCEEE------EE
T ss_pred CeEEEECCCCcEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECCCCCEEEecCC-CC--CCCCce------EE
Confidence 5899999886532222223566899999996 46899999989999999986654332211 00 000111 12
Q ss_pred cccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD 487 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~ 487 (841)
+|. .++||+++...+.|.+++++|+............|.+|++|+. |.||+++.. .+.|.+++.+|.... + ..
T Consensus 148 ~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~~--~~~i~~~~~~g~~~~-~-~~- 220 (299)
T 2z2n_A 148 LGS-DNALWFTENQNNAIGRITESGDITEFKIPTPASGPVGITKGND-DALWFVEII--GNKIGRITTSGEITE-F-KI- 220 (299)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTT-SSEEEEETT--TTEEEEECTTCCEEE-E-EC-
T ss_pred EcC-CCCEEEEeCCCCEEEEEcCCCcEEEeeCCCCCCcceeEEECCC-CCEEEEccC--CceEEEECCCCcEEE-E-EC-
Confidence 221 3789999988889999999777665444455678999999986 789999976 679999999665322 2 21
Q ss_pred ccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEecc
Q psy14257 488 LLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 488 ~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~ 567 (841)
......|.+|++|+ +++||+++...+.|.+++++|........ .....|.++++.++.||+++. .+.|.+++..
T Consensus 221 --~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~~g~~~~~~~~--~~~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 221 --PTPNARPHAITAGA-GIDLWFTEWGANKIGRLTSNNIIEEYPIQ--IKSAEPHGICFDGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp --SSTTCCEEEEEECS-TTCEEEEETTTTEEEEEETTTEEEEEECS--SSSCCEEEEEECSSCEEEEET-TTEEEEEEEC
T ss_pred --CCCCCCceeEEECC-CCCEEEeccCCceEEEECCCCceEEEeCC--CCCCccceEEecCCCEEEEec-CCcEEEEEcC
Confidence 13567899999996 47899999888999999997743322222 225679999996689999987 6788888765
Q ss_pred CC
Q psy14257 568 NG 569 (841)
Q Consensus 568 ~g 569 (841)
++
T Consensus 295 ~~ 296 (299)
T 2z2n_A 295 KD 296 (299)
T ss_dssp --
T ss_pred cc
Confidence 43
No 38
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.73 E-value=4.1e-16 Score=169.49 Aligned_cols=257 Identities=14% Similarity=0.078 Sum_probs=174.9
Q ss_pred cceeeecccccCCcceeEEEecCC------------------------CeEEEEEecCCcccceEEEEeCCCCCccceEE
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVID------------------------DKIYNATLIGNSLSNIDVVVQTGLSTAEGLAV 304 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~------------------------~~I~~~~~~~~~~~~~~~~~~~~l~~p~giav 304 (841)
..+.+|.++.. ++ ||+++... ++|++.+.++|.+ ....-...+..|.|||+
T Consensus 24 ~~v~~va~d~~-G~--l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~p~gia~ 98 (329)
T 3fvz_A 24 GQVSGVALDSK-NN--LVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI--LQSSGKNLFYLPHGLSI 98 (329)
T ss_dssp SCEEEEEECTT-CC--EEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE--EEEECTTTCSSEEEEEE
T ss_pred CCceEEEECCC-CC--EEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE--EeccCCCccCCceEEEE
Confidence 44566666654 55 88888776 3677877665542 11111234678999999
Q ss_pred eeecCceeEEEeeecCCCCCCCCCCEEEEccCCC--cccccc--------ccCcCCCceEEEEccCCEEEEEeC-CCCeE
Q psy14257 305 DWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGE--NRSPLV--------TKNIQWPSSLVIDYNQDILYWCDS-HLNTV 373 (841)
Q Consensus 305 D~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~--~~~~l~--------~~~~~~P~glavD~~~~~lYwaD~-~~~~I 373 (841)
|+.+ ++| +++. .+++|.+++++|. ....+. ...+..|.+|++|+.++.||++|. ..++|
T Consensus 99 d~~g-~l~--v~d~-------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 99 DTDG-NYW--VTDV-------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp CTTS-CEE--EEET-------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred CCCC-CEE--EEEC-------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 9654 444 4543 3469999999998 344443 345778999999998899999997 79999
Q ss_pred EEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccC-CceEEEEecCC-CCCceeEEE
Q psy14257 374 ESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS-GQFRRTLIAGD-MESPRAIAL 451 (841)
Q Consensus 374 ~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~-l~~P~giav 451 (841)
++++.+|.....+.....-..+....+.....+++|..+++||++|..+++|.+++++ |+...++.... -..|.++++
T Consensus 169 ~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 248 (329)
T 3fvz_A 169 VQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISY 248 (329)
T ss_dssp EEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEE
T ss_pred EEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeee
Confidence 9999998766554322110000000011112245666679999999999999999998 88887765332 357888888
Q ss_pred cCCCCeEEEEecC-----CCCCeEEEecCC-CCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 452 DPRFGLLFWTDWD-----SKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 452 d~~~g~Ly~td~~-----~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
.| |.+|.++.. ....+|...++. |.....+.. ....+..|.+|++|+. +.||++|..+++|.+++++|
T Consensus 249 ~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~---~~~~~~~p~~ia~~~d-G~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 249 IP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP---VRKHFDMPHDIVASED-GTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp ET--TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC---SSSCCSSEEEEEECTT-SEEEEEESSSCCEEEEEEEE
T ss_pred cC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC---CCCccCCeeEEEECCC-CCEEEEECCCCEEEEEeCCc
Confidence 87 677766532 114578888864 433332211 1246788999999975 59999999999999999887
Q ss_pred C
Q psy14257 526 K 526 (841)
Q Consensus 526 ~ 526 (841)
.
T Consensus 323 ~ 323 (329)
T 3fvz_A 323 K 323 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.70 E-value=2.8e-15 Score=158.90 Aligned_cols=240 Identities=14% Similarity=0.140 Sum_probs=169.1
Q ss_pred ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEe------CCCCCccceEEeeecCceeEEEeeecCC
Q psy14257 248 LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQ------TGLSTAEGLAVDWIGKNLYMFWAFWSLS 321 (841)
Q Consensus 248 ~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~------~~l~~p~giavD~~~~~~y~~~td~~~~ 321 (841)
+..+.+|.++.. +. ||++|...++|.+.+.++.. ...+. ..+..|.+++++... ..+|+++.+
T Consensus 29 ~~~p~~v~~~~~-g~--l~v~~~~~~~i~~~d~~g~~----~~~~~~~~~~~~~~~~p~~i~~~~~~--g~l~v~~~~-- 97 (286)
T 1q7f_A 29 FTEPSGVAVNAQ-ND--IIVADTNNHRIQIFDKEGRF----KFQFGECGKRDSQLLYPNRVAVVRNS--GDIIVTERS-- 97 (286)
T ss_dssp BSCEEEEEECTT-CC--EEEEEGGGTEEEEECTTSCE----EEEECCBSSSTTCBSSEEEEEEETTT--TEEEEEECG--
T ss_pred cCCCceEEECCC-CC--EEEEECCCCEEEEECCCCcE----EEEecccCCCcccccCceEEEEEcCC--CeEEEEcCC--
Confidence 345667777654 45 99999999999999876432 22221 124579999995433 344455532
Q ss_pred CCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccC
Q psy14257 322 PSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIP 401 (841)
Q Consensus 322 ~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~ 401 (841)
.+++|.+++.+|+....+....+..|.+|++|++
T Consensus 98 ----~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~------------------------------------------ 131 (286)
T 1q7f_A 98 ----PTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNK------------------------------------------ 131 (286)
T ss_dssp ----GGCEEEEECTTSCEEEEECTTTCSCEEEEEECTT------------------------------------------
T ss_pred ----CCCEEEEECCCCcEEEEecCccCCCceEEEEeCC------------------------------------------
Confidence 1358999999888776665556778999999875
Q ss_pred CCCCCccccccceEEEEecCCCcEEEEccCCceEEEEec-CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc
Q psy14257 402 NCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA-GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR 480 (841)
Q Consensus 402 ~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~ 480 (841)
++||+++...++|.+++.+|+....+.. ..+..|++|++|+. |.||+++.. ..+|.+.+.+|...
T Consensus 132 -----------g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~-g~l~v~~~~--~~~i~~~~~~g~~~ 197 (286)
T 1q7f_A 132 -----------GRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDK-QEIFISDNR--AHCVKVFNYEGQYL 197 (286)
T ss_dssp -----------SCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSS-SEEEEEEGG--GTEEEEEETTCCEE
T ss_pred -----------CCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCC-CCEEEEECC--CCEEEEEcCCCCEE
Confidence 4455555445556666666655444432 34678999999985 889999987 68999999988654
Q ss_pred EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCC-eEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCC
Q psy14257 481 SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSD-SIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRT 558 (841)
Q Consensus 481 ~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~-~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~ 558 (841)
..+.. ...+..|.+|++|+ +++||+++...+ +|.+++.+|.....+.... ....|.+|++. +++||+++. .
T Consensus 198 ~~~~~----~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~g~l~vs~~-~ 270 (286)
T 1q7f_A 198 RQIGG----EGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQDGQLISALESKV-KHAQCFDVALMDDGSVVLASK-D 270 (286)
T ss_dssp EEESC----TTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECTTSCEEEEEEESS-CCSCEEEEEEETTTEEEEEET-T
T ss_pred EEEcc----CCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECCCCCEEEEEcccC-CCCcceeEEECCCCcEEEECC-C
Confidence 44322 12357899999996 579999998886 9999999998877776542 24468999996 589999975 5
Q ss_pred CeEEEEe
Q psy14257 559 NSVIRAN 565 (841)
Q Consensus 559 ~~i~~~~ 565 (841)
++|..++
T Consensus 271 ~~v~v~~ 277 (286)
T 1q7f_A 271 YRLYIYR 277 (286)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 6776554
No 40
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.69 E-value=4.3e-15 Score=155.72 Aligned_cols=241 Identities=17% Similarity=0.235 Sum_probs=172.7
Q ss_pred CceeEEEcCCCCeEEE-EecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 445 SPRAIALDPRFGLLFW-TDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~-td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
.|.+|++|+. |.||+ ++.. .++|.+.+.++.....+.. ..+..|.+|++|+ +++||+++. .+.|.++++
T Consensus 25 ~p~~i~~~~~-g~l~v~~~~~--~~~i~~~~~~~~~~~~~~~-----~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~ 94 (270)
T 1rwi_B 25 SPSGVAVDSA-GNVYVTSEGM--YGRVVKLATGSTGTTVLPF-----NGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAA 94 (270)
T ss_dssp CEEEEEECTT-CCEEEEECSS--SCEEEEECC-----EECCC-----CSCCSCCCEEECT-TCCEEEEET-TTEEEEECT
T ss_pred CccceEECCC-CCEEEEccCC--CCcEEEecCCCcccceEee-----CCcCCcceeEECC-CCCEEEEcC-CCEEEEEeC
Confidence 9999999986 67999 8766 6899999876654433322 4567899999996 567999998 789999999
Q ss_pred CCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCC
Q psy14257 524 DGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNC 602 (841)
Q Consensus 524 dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~C 602 (841)
+|.....+... .+..|.+|++. +++||+++...+.|.+++..+.. .
T Consensus 95 ~~~~~~~~~~~--~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--~----------------------------- 141 (270)
T 1rwi_B 95 GSNNQTVLPFD--GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT--Q----------------------------- 141 (270)
T ss_dssp TCSCCEECCCC--SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS--C-----------------------------
T ss_pred CCceEeeeecC--CcCCCcceEECCCCCEEEEECCCCEEEEEECCCce--e-----------------------------
Confidence 99766544322 25689999996 67899999877777665321000 0
Q ss_pred ccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCE
Q psy14257 603 SHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKK 682 (841)
Q Consensus 603 s~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~ 682 (841)
... ....+..|.+|++|+.. .
T Consensus 142 ------------------------------------~~~----------------------~~~~~~~p~~i~~~~~g-~ 162 (270)
T 1rwi_B 142 ------------------------------------TVL----------------------PFTGLNDPDGVAVDNSG-N 162 (270)
T ss_dssp ------------------------------------EEC----------------------CCCSCCSCCCEEECTTC-C
T ss_pred ------------------------------------Eee----------------------ccccCCCceeEEEeCCC-C
Confidence 000 00012345678888754 5
Q ss_pred EEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCC
Q psy14257 683 IYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQS 762 (841)
Q Consensus 683 iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~ 762 (841)
||+++...+.|++++.++.. ........+..|.+|++|..+ +||++ +...+
T Consensus 163 l~v~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~~p~~i~~d~~g-~l~v~--~~~~~ 213 (270)
T 1rwi_B 163 VYVTDTDNNRVVKLEAESNN--------------------------QVVLPFTDITAPWGIAVDEAG-TVYVT--EHNTN 213 (270)
T ss_dssp EEEEEGGGTEEEEECTTTCC--------------------------EEECCCSSCCSEEEEEECTTC-CEEEE--ETTTS
T ss_pred EEEEECCCCEEEEEecCCCc--------------------------eEeecccCCCCceEEEECCCC-CEEEE--ECCCC
Confidence 99999888999999988765 222223455789999999876 89999 45678
Q ss_pred eEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCce
Q psy14257 763 KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR 825 (841)
Q Consensus 763 ~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~ 825 (841)
+|.++++++.....+... .+..|.+|++++. |.||+++.+.+ +|....++-..+
T Consensus 214 ~v~~~~~~~~~~~~~~~~------~~~~p~~i~~~~~-g~l~v~~~~~~--~v~~~~~~~~~~ 267 (270)
T 1rwi_B 214 QVVKLLAGSTTSTVLPFT------GLNTPLAVAVDSD-RTVYVADRGND--RVVKLTSLEHHH 267 (270)
T ss_dssp CEEEECTTCSCCEECCCC------SCSCEEEEEECTT-CCEEEEEGGGT--EEEEECCCGGGS
T ss_pred cEEEEcCCCCcceeeccC------CCCCceeEEECCC-CCEEEEECCCC--EEEEEcCCCccc
Confidence 999999998765543322 1678999999986 68999999874 899988876654
No 41
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.64 E-value=1.9e-13 Score=144.73 Aligned_cols=249 Identities=14% Similarity=0.182 Sum_probs=176.3
Q ss_pred CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC-CCeEE
Q psy14257 441 GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK-SDSIH 519 (841)
Q Consensus 441 ~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~-~~~I~ 519 (841)
..+..|.+|++++. |.||+++.. .++|.+.+.+|.....+...+.....+..|.+|+++..+++||+++.. .+.|.
T Consensus 27 g~~~~p~~v~~~~~-g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~ 103 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQ-NDIIVADTN--NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ 103 (286)
T ss_dssp TCBSCEEEEEECTT-CCEEEEEGG--GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE
T ss_pred CccCCCceEEECCC-CCEEEEECC--CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE
Confidence 34688999999986 789999976 689999999976544443211111245689999997678999999965 78999
Q ss_pred EEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCC
Q psy14257 520 TVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMN 598 (841)
Q Consensus 520 ~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ 598 (841)
+++.+|.....+... .+..|.+|++. ++.||+++...+.|.+++.. |+...
T Consensus 104 ~~d~~g~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~------------------------- 155 (286)
T 1q7f_A 104 IYNQYGQFVRKFGAT--ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLH------------------------- 155 (286)
T ss_dssp EECTTSCEEEEECTT--TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-------------------------
T ss_pred EECCCCcEEEEecCc--cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEE-------------------------
Confidence 999998877666432 35689999995 57899999877777666531 11000
Q ss_pred CCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEec
Q psy14257 599 NGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDA 678 (841)
Q Consensus 599 ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~ 678 (841)
.+.. . ..+..|.+|++|+
T Consensus 156 --------------------------------------------------~~~~--~----------~~~~~p~~i~~~~ 173 (286)
T 1q7f_A 156 --------------------------------------------------KFGC--S----------KHLEFPNGVVVND 173 (286)
T ss_dssp --------------------------------------------------EEEC--T----------TTCSSEEEEEECS
T ss_pred --------------------------------------------------EeCC--C----------CccCCcEEEEECC
Confidence 0000 0 1123467889997
Q ss_pred CCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEee-CCCCCcceeEEeecCCcEEEEec
Q psy14257 679 ANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVD-AGISHPSGLAIDWIAQNMFIAVS 757 (841)
Q Consensus 679 ~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~glAvD~~~~~LYw~~~ 757 (841)
. +.||+++...+.|++++.+|.. ...+.. ..+..|.+||+|+.+ +||+++
T Consensus 174 ~-g~l~v~~~~~~~i~~~~~~g~~--------------------------~~~~~~~g~~~~p~~i~~d~~G-~l~v~~- 224 (286)
T 1q7f_A 174 K-QEIFISDNRAHCVKVFNYEGQY--------------------------LRQIGGEGITNYPIGVGINSNG-EILIAD- 224 (286)
T ss_dssp S-SEEEEEEGGGTEEEEEETTCCE--------------------------EEEESCTTTSCSEEEEEECTTC-CEEEEE-
T ss_pred C-CCEEEEECCCCEEEEEcCCCCE--------------------------EEEEccCCccCCCcEEEECCCC-CEEEEe-
Confidence 4 6799999889999999987755 223322 225789999999865 899994
Q ss_pred CCCCC-eEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecC
Q psy14257 758 SPTQS-KIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD 821 (841)
Q Consensus 758 ~~~~~-~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~d 821 (841)
...+ +|.+++.+|.....+.... ....|.+|+++|. |.||+++... +|...++.
T Consensus 225 -~~~~~~i~~~~~~g~~~~~~~~~~-----~~~~~~~i~~~~~-g~l~vs~~~~---~v~v~~~~ 279 (286)
T 1q7f_A 225 -NHNNFNLTIFTQDGQLISALESKV-----KHAQCFDVALMDD-GSVVLASKDY---RLYIYRYV 279 (286)
T ss_dssp -CSSSCEEEEECTTSCEEEEEEESS-----CCSCEEEEEEETT-TEEEEEETTT---EEEEEECS
T ss_pred -CCCCEEEEEECCCCCEEEEEcccC-----CCCcceeEEECCC-CcEEEECCCC---eEEEEEcc
Confidence 4555 9999999998766665430 1346999999995 7899997532 57666543
No 42
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.63 E-value=1.5e-16 Score=133.15 Aligned_cols=63 Identities=51% Similarity=1.107 Sum_probs=58.5
Q ss_pred eeccCccCcCCcCCCCCCCCC-CCCCCCCCCCCC-CCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDE-LAEHCQDRKCDE-SHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde-~~~~C~~~~C~~-~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
+|||..|+|||..||.||||| . +|....|.+ .+|+|. +++||+..|+|||..||. |||||.+|
T Consensus 16 ~Ci~~~~~CDg~~DC~DgsDE~~--~C~~~~C~~~~~f~C~-~g~CI~~~~~CDG~~DC~--DgSDE~~C 80 (82)
T 2fyj_A 16 RCIPISWTCDLDDDCGDRSDESA--SCAYPTCFPLTQFTCN-NGRCININWRCDNDNDCG--DNSDEAGC 80 (82)
T ss_dssp CEEETTSSSSCSSSSCSTTTTTS--SCCCSSSCSSSEEECT-TSCEEETTCBSSSSBCCS--SSSSCSCC
T ss_pred CEEeccccCCCcccCCCcccccc--ccccccCCCCCceECC-CCCeEcHHHccCCCCcCC--CCccccCC
Confidence 699999999999999999999 6 898889965 899998 889999999999999999 99998775
No 43
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.63 E-value=2.7e-14 Score=153.41 Aligned_cols=227 Identities=12% Similarity=0.022 Sum_probs=157.2
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCC--CeEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL--NTVE 374 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~--~~I~ 374 (841)
..|+|+|+|+. ++ +||+|. ..++|.+++.+|+....+ ..-..|.||++|.++ +||++|... .+|.
T Consensus 32 ~~pegia~~~~-g~--lyv~d~-------~~~~I~~~d~~g~~~~~~--~~~~~p~gia~~~dG-~l~vad~~~~~~~v~ 98 (306)
T 2p4o_A 32 TFLENLASAPD-GT--IFVTNH-------EVGEIVSITPDGNQQIHA--TVEGKVSGLAFTSNG-DLVATGWNADSIPVV 98 (306)
T ss_dssp CCEEEEEECTT-SC--EEEEET-------TTTEEEEECTTCCEEEEE--ECSSEEEEEEECTTS-CEEEEEECTTSCEEE
T ss_pred CCcceEEECCC-CC--EEEEeC-------CCCeEEEECCCCceEEEE--eCCCCceeEEEcCCC-cEEEEeccCCcceEE
Confidence 57999999974 34 556654 346999999998643322 223579999999875 499999754 3588
Q ss_pred EEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEE----------ecCCCC
Q psy14257 375 SVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTL----------IAGDME 444 (841)
Q Consensus 375 ~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l----------~~~~l~ 444 (841)
+++......+.+....... ...++ .+|.++++|++|...++|++++.++...++. ....+.
T Consensus 99 ~~d~~~g~~~~~~~~~~~~--~~~g~-------~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~ 169 (306)
T 2p4o_A 99 SLVKSDGTVETLLTLPDAI--FLNGI-------TPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFP 169 (306)
T ss_dssp EEECTTSCEEEEEECTTCS--CEEEE-------EESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSC
T ss_pred EEcCCCCeEEEEEeCCCcc--ccCcc-------cccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCC
Confidence 8876555454444321100 00011 1255688999998889999999875422221 123467
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCCC--C--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEE
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG--E--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHT 520 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG--~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~ 520 (841)
.|+|| ++..++||+++.. .++|+++++++ + .++.+.. +..|.||++|. +++||+++..+++|.+
T Consensus 170 ~pngi--s~dg~~lyv~d~~--~~~I~~~~~~~~g~~~~~~~~~~-------~~~P~gi~vd~-dG~l~va~~~~~~V~~ 237 (306)
T 2p4o_A 170 AANGL--KRFGNFLYVSNTE--KMLLLRIPVDSTDKPGEPEIFVE-------QTNIDDFAFDV-EGNLYGATHIYNSVVR 237 (306)
T ss_dssp SEEEE--EEETTEEEEEETT--TTEEEEEEBCTTSCBCCCEEEEE-------SCCCSSEEEBT-TCCEEEECBTTCCEEE
T ss_pred cCCCc--CcCCCEEEEEeCC--CCEEEEEEeCCCCCCCccEEEec-------cCCCCCeEECC-CCCEEEEeCCCCeEEE
Confidence 89998 6667899999988 78999999985 2 2344433 36799999996 5789999999999999
Q ss_pred EEcCCCeeEEEEcCCCCCCcceEEEEe-----cCeEEEEeCCC
Q psy14257 521 VTYDGKDHHVVLSNHDSLTHPFAIALF-----ENHVYWTDWRT 558 (841)
Q Consensus 521 ~~~dG~~~~~i~~~~~~l~~P~gla~~-----~~~lY~td~~~ 558 (841)
++++|.... +......+..|.++++. .++||+++...
T Consensus 238 ~~~~G~~~~-~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 238 IAPDRSTTI-IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECTTCCEEE-EECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred ECCCCCEEE-EeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 999986543 22222225789999985 27999999764
No 44
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.61 E-value=4.7e-14 Score=152.60 Aligned_cols=251 Identities=16% Similarity=0.144 Sum_probs=167.1
Q ss_pred ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeC-------------------CCCCccceEEeeec
Q psy14257 248 LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQT-------------------GLSTAEGLAVDWIG 308 (841)
Q Consensus 248 ~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~-------------------~l~~p~giavD~~~ 308 (841)
+..+.++.|+.. +. +||++...++|++.+..++. .+.+... .+..|.||++|+..
T Consensus 18 ~~~p~~i~~d~~-g~--~l~v~~~~~~i~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 18 SYAPNSFTFDST-NK--GFYTSVQDGRVIKYEGPNSG---FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp SSCCCCEECCTT-CS--SEEEECTTSEEEEECCTTTC---EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred cCCceEEEEcCC-CC--EEEEEcCCCeEEEECCCCCc---eEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 566777777764 55 89999999999999876543 2222211 12469999999633
Q ss_pred CceeEEEeeecCCCCCCCCCCEEEEccCCCccccccc----cCcCCCceEEEEccCCEEEEEeCC---------------
Q psy14257 309 KNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVT----KNIQWPSSLVIDYNQDILYWCDSH--------------- 369 (841)
Q Consensus 309 ~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~----~~~~~P~glavD~~~~~lYwaD~~--------------- 369 (841)
+++|+ ++.. ++|.++++++...+.+.. ..+..|++|++|+..++||++|..
T Consensus 92 g~l~v--~d~~--------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 92 NQLYI--VDCY--------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp TEEEE--EETT--------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred CcEEE--EECC--------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 45555 4432 358899888655554432 246789999999845799999975
Q ss_pred --CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCc---eEEEEecCCCC
Q psy14257 370 --LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQ---FRRTLIAGDME 444 (841)
Q Consensus 370 --~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~---~~~~l~~~~l~ 444 (841)
.+.|++++.++...+.+.. .+..+.. ++++..++.||++|...++|.++++++. ..+++.. +.
T Consensus 162 ~~~g~v~~~d~~~~~~~~~~~--~~~~p~g--------ia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~ 229 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETTLLLK--ELHVPGG--------AEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IP 229 (322)
T ss_dssp CCCEEEEEEETTTTEEEEEEE--EESCCCE--------EEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CS
T ss_pred CCCceEEEEeCCCCEEEEecc--CCccCcc--------eEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CC
Confidence 2679999887665544322 1222222 2344444679999999999999999863 2333332 22
Q ss_pred CceeEEEcCCCCeEEEEecC--------CCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCC
Q psy14257 445 SPRAIALDPRFGLLFWTDWD--------SKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSD 516 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~--------~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~ 516 (841)
.|.+|++|+. |.||++++. ...++|.+++.+|.....+.... ...+..|.+++.+ +++||+++..++
T Consensus 230 gP~gi~~d~~-G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~--g~~~~~~~~~~~~--~g~L~v~~~~~~ 304 (322)
T 2fp8_A 230 NPGNIKRNAD-GHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPP--PFAGEHFEQIQEH--DGLLYIGTLFHG 304 (322)
T ss_dssp SEEEEEECTT-SCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCT--TTTTSCCCEEEEE--TTEEEEECSSCS
T ss_pred CCCCeEECCC-CCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCC--CCccccceEEEEe--CCEEEEeecCCC
Confidence 2999999985 789999865 11367999999987655554310 0126789998875 789999999999
Q ss_pred eEEEEEcCCCeeEEE
Q psy14257 517 SIHTVTYDGKDHHVV 531 (841)
Q Consensus 517 ~I~~~~~dG~~~~~i 531 (841)
+|.+++++.+...++
T Consensus 305 ~i~~~~~~~~~~~~~ 319 (322)
T 2fp8_A 305 SVGILVYDKKGNSFV 319 (322)
T ss_dssp EEEEEEC--------
T ss_pred ceEEEecccccCccc
Confidence 999999887655433
No 45
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=4.5e-13 Score=145.35 Aligned_cols=289 Identities=9% Similarity=0.114 Sum_probs=186.6
Q ss_pred ceEEEEecC-----CCcEEEEccCC-ceEEEEec----CCC-CCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCc
Q psy14257 413 KNLYWVESN-----LDQIEVAKLSG-QFRRTLIA----GDM-ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHR 480 (841)
Q Consensus 413 ~~LY~tD~~-----~~~I~v~~~~G-~~~~~l~~----~~l-~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~ 480 (841)
+.+|++..+ .+.|.+++++. +....+.. ..+ ..|++|+++ .++||++... .+.|.+++.. ++..
T Consensus 2 ~g~~v~neg~~g~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~--~~~lyv~~~~--~~~v~viD~~t~~~~ 77 (328)
T 3dsm_A 2 SGLFITNEGNFQYSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR--DGIGWIVVNN--SHVIFAIDINTFKEV 77 (328)
T ss_dssp CEEEEEECCCTTSCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE--TTEEEEEEGG--GTEEEEEETTTCCEE
T ss_pred CeEEEEecCCCCCCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE--CCEEEEEEcC--CCEEEEEECcccEEE
Confidence 456777665 56788887764 33222211 112 468999996 5799999986 6899999986 3333
Q ss_pred EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC---CCCCcceEEEEecCeEEEEeCC
Q psy14257 481 SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH---DSLTHPFAIALFENHVYWTDWR 557 (841)
Q Consensus 481 ~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~---~~l~~P~gla~~~~~lY~td~~ 557 (841)
..+ . ....|.+|++++. ++||+++...+.|.++++........+... .....|.+|++.+++||++++.
T Consensus 78 ~~i-~------~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~ 149 (328)
T 3dsm_A 78 GRI-T------GFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS 149 (328)
T ss_dssp EEE-E------CCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT
T ss_pred EEc-C------CCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC
Confidence 333 2 4678999999754 599999977899999999876554333221 1223799999999999999994
Q ss_pred -CCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCc
Q psy14257 558 -TNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636 (841)
Q Consensus 558 -~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~ 636 (841)
.+.|..++..+++....+... ..| .+..+.+|+
T Consensus 150 ~~~~v~viD~~t~~~~~~i~~g-~~p-------------------------------------~~i~~~~dG-------- 183 (328)
T 3dsm_A 150 YQNRILKIDTETDKVVDELTIG-IQP-------------------------------------TSLVMDKYN-------- 183 (328)
T ss_dssp TCCEEEEEETTTTEEEEEEECS-SCB-------------------------------------CCCEECTTS--------
T ss_pred CCCEEEEEECCCCeEEEEEEcC-CCc-------------------------------------cceEEcCCC--------
Confidence 889999998877655444311 111 111111111
Q ss_pred eeEEeec-----------CCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceee
Q psy14257 637 QFIIFSR-----------PREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQL 705 (841)
Q Consensus 637 ~~l~~~~-----------~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~ 705 (841)
.+++.+. ...|..++..... ....+.++.-..|.+|++++..+.||+++. +|+++++.+..+.
T Consensus 184 ~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~--v~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~- 257 (328)
T 3dsm_A 184 KMWTITDGGYEGSPYGYEAPSLYRIDAETFT--VEKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVP- 257 (328)
T ss_dssp EEEEEBCCBCTTCSSCBCCCEEEEEETTTTE--EEEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCC-
T ss_pred CEEEEECCCccCCccccCCceEEEEECCCCe--EEEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCcee-
Confidence 1111111 1346666654321 111233332347899999999999999984 8999888654410
Q ss_pred eeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecC--CCCCeEEEEecCCcceEEEEcCCCC
Q psy14257 706 VVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSS--PTQSKIVVCNLEGEYQTTILSNESN 783 (841)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~--~~~~~I~v~~l~g~~~~~~~~~~~~ 783 (841)
...++......|.|||+|+.+++||+++.. ...++|.+++++|+....+--+
T Consensus 258 -----------------------~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G--- 311 (328)
T 3dsm_A 258 -----------------------VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVG--- 311 (328)
T ss_dssp -----------------------SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEE---
T ss_pred -----------------------eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEec---
Confidence 001111124679999999989999999400 4678999999998866655433
Q ss_pred CCCcCCCceEEEE
Q psy14257 784 DTSTLSKISSIAV 796 (841)
Q Consensus 784 ~~~~l~~p~~iav 796 (841)
..|.+|+.
T Consensus 312 -----~~P~~~~~ 319 (328)
T 3dsm_A 312 -----IIPGAFCW 319 (328)
T ss_dssp -----ESEEEEEE
T ss_pred -----cCcceEEE
Confidence 57888875
No 46
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.59 E-value=1.2e-16 Score=132.65 Aligned_cols=63 Identities=51% Similarity=1.130 Sum_probs=58.6
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCC--Ccc
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDE--DHC 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde--~~C 69 (841)
+|||..|+|||..||.|||||. +|....|.+.+|+|. +++|||..|+|||..||. ||||| .+|
T Consensus 14 ~CI~~~~~CDg~~DC~DgSDE~--~C~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~--dgsDE~~~~C 78 (80)
T 2fcw_B 14 KCISRQFVCDSDRDCLDGSDEA--SCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE--DGSDEWPQRC 78 (80)
T ss_dssp CEEEGGGTTSSSCCSTTCTTTT--THHHHHCCTTEEECT-TSCEEEGGGTTSSSCCST--TCGGGCGGGC
T ss_pred CEEeeecccCCcccCCCccccc--ccccccCCceeeECC-CCCEEecccccCCCcCCC--CCCCcCcccC
Confidence 6999999999999999999999 897778999999998 799999999999999999 99999 544
No 47
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=1.2e-13 Score=147.72 Aligned_cols=213 Identities=14% Similarity=0.085 Sum_probs=153.6
Q ss_pred cccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecC
Q psy14257 342 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN 421 (841)
Q Consensus 342 ~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~ 421 (841)
.++......++|.++|++++.|||+|...++|+++++++...+.+... ....+ ++++. .++||++.
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~-----~~~~~------i~~~~-dG~l~v~~-- 71 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMD-----APVSS------VALRQ-SGGYVATI-- 71 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECS-----SCEEE------EEEBT-TSSEEEEE--
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCC-----CceEE------EEECC-CCCEEEEE--
Confidence 344567889999999999999999999999999999998765443211 00001 12222 25677776
Q ss_pred CCcEEEEccCCceEEEEecC----CCCCceeEEEcCCCCeEEEEecCC---------CCCeEEEecCCCCCcEEEEEecc
Q psy14257 422 LDQIEVAKLSGQFRRTLIAG----DMESPRAIALDPRFGLLFWTDWDS---------KAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 422 ~~~I~v~~~~G~~~~~l~~~----~l~~P~giavd~~~g~Ly~td~~~---------~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
.+.|.++++++...+.+... ....|++|++|+. |.||+++.+. ...+|++++.+|.... +.
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~d-G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~---- 145 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPA-GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YF---- 145 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTT-SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EE----
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCC-CCEEEecCCcccccccccCCCcEEEEEECCCCEEE-Ee----
Confidence 46899999876555544432 2356899999986 7799987431 2458999998875443 22
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC---CC--eeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEE
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD---GK--DHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVI 562 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d---G~--~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~ 562 (841)
..+..|+||+++++++.|||++...++|.+++++ |. .++.+.........|.||+++ +|+||++.+..++|.
T Consensus 146 --~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~ 223 (297)
T 3g4e_A 146 --DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVI 223 (297)
T ss_dssp --EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEE
T ss_pred --eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEE
Confidence 2467899999999888999999999999999875 32 234444332223579999995 589999999999999
Q ss_pred EEeccCCcceEEEe
Q psy14257 563 RANKWNGSDVTLIQ 576 (841)
Q Consensus 563 ~~~~~~g~~~~~i~ 576 (841)
++++.+|+....+.
T Consensus 224 ~~d~~tG~~~~~i~ 237 (297)
T 3g4e_A 224 RLDPVTGKRLQTVK 237 (297)
T ss_dssp EECTTTCCEEEEEE
T ss_pred EEcCCCceEEEEEE
Confidence 99988787665553
No 48
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.58 E-value=2.8e-13 Score=146.99 Aligned_cols=241 Identities=10% Similarity=0.023 Sum_probs=166.4
Q ss_pred eEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccc
Q psy14257 265 VFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLV 344 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~ 344 (841)
||++....+.|.++++..+. ...++ .....|++|++++.+ + +|+++. .+++|.++++........+
T Consensus 56 lyv~~~~~~~v~viD~~t~~--~~~~i--~~~~~p~~i~~~~~g-~--lyv~~~-------~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 56 GWIVVNNSHVIFAIDINTFK--EVGRI--TGFTSPRYIHFLSDE-K--AYVTQI-------WDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp EEEEEGGGTEEEEEETTTCC--EEEEE--ECCSSEEEEEEEETT-E--EEEEEB-------SCSEEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCEEEEEECcccE--EEEEc--CCCCCCcEEEEeCCC-e--EEEEEC-------CCCeEEEEECCCCeEEEEE
Confidence 99999988999999887654 22333 346789999997643 4 455552 1358999987654333222
Q ss_pred cc-----CcCCCceEEEEccCCEEEEEeC-CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEE
Q psy14257 345 TK-----NIQWPSSLVIDYNQDILYWCDS-HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWV 418 (841)
Q Consensus 345 ~~-----~~~~P~glavD~~~~~lYwaD~-~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~t 418 (841)
.. ....|.+|++ .+++||+++. ..++|.++++........+... ..+.. ++++. .++||++
T Consensus 122 ~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g--~~p~~--------i~~~~-dG~l~v~ 188 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG--IQPTS--------LVMDK-YNKMWTI 188 (328)
T ss_dssp ECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS--SCBCC--------CEECT-TSEEEEE
T ss_pred EcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC--CCccc--------eEEcC-CCCEEEE
Confidence 21 2238999999 5899999998 4889999998765443332221 11111 12332 2779998
Q ss_pred ecCC----------CcEEEEccCCc-eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcE--EEEE
Q psy14257 419 ESNL----------DQIEVAKLSGQ-FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRS--VIVR 485 (841)
Q Consensus 419 D~~~----------~~I~v~~~~G~-~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~--~i~~ 485 (841)
.... +.|.+++.... ....+....-..|++|+++|.+++||+++. .|++++++..... .++.
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-----~v~~~d~~t~~~~~~~~~~ 263 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-----DIWRMPVEADRVPVRPFLE 263 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-----SEEEEETTCSSCCSSCSBC
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-----EEEEEECCCCceeeeeeec
Confidence 8765 78999998744 333433222258999999999999999873 7899888643321 1111
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEe----CCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEE
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWID----AKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIAL 546 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d----~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~ 546 (841)
.....|.||++|+.+++||+++ ...++|.+++++|+...++..+ ..|.+|+.
T Consensus 264 -----~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G----~~P~~~~~ 319 (328)
T 3dsm_A 264 -----FRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVG----IIPGAFCW 319 (328)
T ss_dssp -----CCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEE----ESEEEEEE
T ss_pred -----CCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEec----cCcceEEE
Confidence 1257899999998899999999 7788999999999888777543 46777776
No 49
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.56 E-value=5.6e-13 Score=143.12 Aligned_cols=237 Identities=14% Similarity=0.078 Sum_probs=157.5
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.++.|+.. ++ |||+|...++|++++.+++ ....+.. -..|.||++++.+ ++ |+++++.. ..
T Consensus 32 ~~pegia~~~~-g~--lyv~d~~~~~I~~~d~~g~----~~~~~~~-~~~p~gia~~~dG-~l--~vad~~~~-----~~ 95 (306)
T 2p4o_A 32 TFLENLASAPD-GT--IFVTNHEVGEIVSITPDGN----QQIHATV-EGKVSGLAFTSNG-DL--VATGWNAD-----SI 95 (306)
T ss_dssp CCEEEEEECTT-SC--EEEEETTTTEEEEECTTCC----EEEEEEC-SSEEEEEEECTTS-CE--EEEEECTT-----SC
T ss_pred CCcceEEECCC-CC--EEEEeCCCCeEEEECCCCc----eEEEEeC-CCCceeEEEcCCC-cE--EEEeccCC-----cc
Confidence 45667777763 56 9999999999999987653 2233333 3579999999654 44 45665421 12
Q ss_pred CEEEEcc-CCCccccccc-cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCc-cccCCCCC
Q psy14257 329 GIEKAGM-HGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSR-VGIPNCRP 405 (841)
Q Consensus 329 ~I~~~~~-dG~~~~~l~~-~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~-~~i~~~~~ 405 (841)
+|.+++. +|+ .+.+.. .....|+|++++ ..+++|++|...++|++++.++...++......+..... .++ ..|
T Consensus 96 ~v~~~d~~~g~-~~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~--~~p 171 (306)
T 2p4o_A 96 PVVSLVKSDGT-VETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF--PAA 171 (306)
T ss_dssp EEEEEECTTSC-EEEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS--CSE
T ss_pred eEEEEcCCCCe-EEEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC--CcC
Confidence 5888764 454 333332 346778999875 567899999989999999987643232211110000000 000 011
Q ss_pred CccccccceEEEEecCCCcEEEEccCC--ce--EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcE
Q psy14257 406 EDNLWIGKNLYWVESNLDQIEVAKLSG--QF--RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRS 481 (841)
Q Consensus 406 ~avdw~~~~LY~tD~~~~~I~v~~~~G--~~--~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~ 481 (841)
..++..++.||++|...++|.++++++ +. .+++.. +..|.+|++|+. |.||++++. .++|.+++.+|+...
T Consensus 172 ngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~d-G~l~va~~~--~~~V~~~~~~G~~~~ 246 (306)
T 2p4o_A 172 NGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVE-GNLYGATHI--YNSVVRIAPDRSTTI 246 (306)
T ss_dssp EEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTT-CCEEEECBT--TCCEEEECTTCCEEE
T ss_pred CCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCC-CCEEEEeCC--CCeEEEECCCCCEEE
Confidence 223445678999999999999999874 21 233332 368999999986 789999998 789999999875432
Q ss_pred EEEEecccCCCCCCceeEEEe---ccCCEEEEEeCC
Q psy14257 482 VIVRVDLLTSRGAWPNGLTLD---YQLTRIYWIDAK 514 (841)
Q Consensus 482 ~i~~~~~~~~~~~~P~glalD---~~~~~LYw~d~~ 514 (841)
+... ...+..|.+++++ ++.++||+++..
T Consensus 247 -~~~~---~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 247 -IAQA---EQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp -EECG---GGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred -Eeec---ccccCCceEEEEecccCCCCEEEEECCC
Confidence 2211 1356889999998 677999999875
No 50
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.56 E-value=1.1e-13 Score=151.71 Aligned_cols=243 Identities=16% Similarity=0.153 Sum_probs=158.4
Q ss_pred EEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccc----ccccCcCCCceEEEEcc---CCE
Q psy14257 290 VVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSP----LVTKNIQWPSSLVIDYN---QDI 362 (841)
Q Consensus 290 ~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~----l~~~~~~~P~glavD~~---~~~ 362 (841)
.++..++..|++|++++.+ ++ |+++. .++|.+.+ +|+.... +.......|.||+++++ +++
T Consensus 24 ~~va~~l~~P~~ia~~pdG-~l--~V~e~--------~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~ 91 (352)
T 2ism_A 24 EEVVGGLEVPWALAFLPDG-GM--LIAER--------PGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPY 91 (352)
T ss_dssp EEEECCCSCEEEEEECTTS-CE--EEEET--------TTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCE
T ss_pred EEEECCCCCceEEEEcCCC-eE--EEEeC--------CCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCE
Confidence 4556789999999999765 34 44543 26899998 7652211 22335678999999998 899
Q ss_pred EEEEeCCC-----CeEEEEEecCCc---cEEEEe-eeeecCCCccccCCCCCCccccccceEEEEecC------------
Q psy14257 363 LYWCDSHL-----NTVESVRVDGSE---RTVSFN-LEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN------------ 421 (841)
Q Consensus 363 lYwaD~~~-----~~I~~~~ldG~~---~~~~~~-~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~------------ 421 (841)
||+++... ++|.++++++.. .++++. ...... +......++++. .++||+++..
T Consensus 92 lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~----~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 92 VYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPH----GLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp EEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTT----CCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTC
T ss_pred EEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCC----CCcCCceEEECC-CCCEEEEECCCCCCccccCCCC
Confidence 99999854 789999998752 223322 110000 000111233443 2699999742
Q ss_pred -CCcEEEEccCCce------------EEEEecCCCCCceeEEEcCCCCeEEEEecCCCC------CeEEEecCCCC----
Q psy14257 422 -LDQIEVAKLSGQF------------RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKA------PRIERCSMSGE---- 478 (841)
Q Consensus 422 -~~~I~v~~~~G~~------------~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~------~~I~r~~ldG~---- 478 (841)
.++|.+++.+|+. ...+...++.+|.||++||..|.||++|.+... ..|.++...+.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp 246 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWP 246 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTT
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCC
Confidence 3689999999832 112334467899999999988999999987321 13665543220
Q ss_pred ----------CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe-------eEEEEcCCCCCCcc
Q psy14257 479 ----------HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD-------HHVVLSNHDSLTHP 541 (841)
Q Consensus 479 ----------~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~-------~~~i~~~~~~l~~P 541 (841)
....+... .....|.|+++ .++.||+++...++|.++++++.. ...++. ...+|
T Consensus 247 ~~~g~~~~~~~~~p~~~~----~~~~ap~G~~~--~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~---~~~rp 317 (352)
T 2ism_A 247 RVVGRGNDPRYRDPLYFW----PQGFPPGNLAF--FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS---GFGRL 317 (352)
T ss_dssp TCCSCCCCTTSCCCSEEC----TTCCCEEEEEE--ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE---SSCCE
T ss_pred cccCCCCCCCCcCCeEec----CCCCCCcceEE--ECCEEEEEECCCCEEEEEEECCCCcceeecchheecc---cCCCe
Confidence 00111110 12346899999 468999999999999999988543 233332 25689
Q ss_pred eEEEEe-cCeEEEEeCCC
Q psy14257 542 FAIALF-ENHVYWTDWRT 558 (841)
Q Consensus 542 ~gla~~-~~~lY~td~~~ 558 (841)
.+|++. +|.||++++..
T Consensus 318 ~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 318 REVQVGPDGALYVTTSNR 335 (352)
T ss_dssp EEEEECTTSCEEEEECST
T ss_pred eEEEECCCCcEEEEEeCC
Confidence 999995 58999999864
No 51
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.55 E-value=3.1e-13 Score=147.98 Aligned_cols=249 Identities=12% Similarity=0.081 Sum_probs=165.2
Q ss_pred EEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccc-----ccCcCCCceEEEEcc---CC
Q psy14257 290 VVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLV-----TKNIQWPSSLVIDYN---QD 361 (841)
Q Consensus 290 ~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~-----~~~~~~P~glavD~~---~~ 361 (841)
.++..++..|++||+++.+ ++ |+++. .++|.+++.+|. +++. ......|.||+++++ ++
T Consensus 22 ~~va~~l~~P~~ia~~pdG-~l--~V~e~--------~g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g 88 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLGGG-RY--LVTER--------PGRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKS 88 (354)
T ss_dssp EEEECSCSCEEEEEEEETT-EE--EEEET--------TTEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSC
T ss_pred EEEeCCCCCCeEEEEcCCC-eE--EEEeC--------CCEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCC
Confidence 3456789999999999864 44 44543 269999988876 3321 234678999999998 89
Q ss_pred EEEEEeCC---C----CeEEEEEecCCc-----cEEEEe-eeeecCCCccccCCCCCCccccccceEEEEecC-------
Q psy14257 362 ILYWCDSH---L----NTVESVRVDGSE-----RTVSFN-LEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN------- 421 (841)
Q Consensus 362 ~lYwaD~~---~----~~I~~~~ldG~~-----~~~~~~-~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~------- 421 (841)
+||+++.. . ++|.|+++++.. .++++. ... .. ......++++. .++||++...
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~--~~----~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~ 161 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPG--AY----IHNGGRIRFGP-DGMLYITTGDAADPRLA 161 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEEC--CS----SCCCCCEEECT-TSCEEEECCCTTCGGGG
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCC--CC----CcCCceEEECC-CCcEEEEECCCCCCccc
Confidence 99999874 3 789999998762 333322 110 00 00011123333 3789999632
Q ss_pred ------CCcEEEEccCCce--------EEEEecCCCCCceeEEEcCCCCeEEEEecCCCC-CeEEEecCCCCC-------
Q psy14257 422 ------LDQIEVAKLSGQF--------RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKA-PRIERCSMSGEH------- 479 (841)
Q Consensus 422 ------~~~I~v~~~~G~~--------~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~-~~I~r~~ldG~~------- 479 (841)
.++|.+++.+|+. .+ +...++.+|.||++||..|.||++|.+... ..|.++.. |.+
T Consensus 162 ~d~~~~~G~I~ri~~dG~~p~~npf~~~~-i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~-G~nyGwp~~~ 239 (354)
T 3a9g_A 162 QDLSSLAGKILRVDEEGRPPADNPFPNSP-IWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK-GGNYGWPLAT 239 (354)
T ss_dssp TCTTCCSSEEEEECTTSCCCTTSSSTTCC-EEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT-TCBCCTTTCC
T ss_pred cCCCCCCeEEEEEcCCCCCCCCCCCCCCc-EEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC-CCcCCCCccc
Confidence 3689999999972 22 344578999999999988999999987321 23555443 221
Q ss_pred --------cEEEEEecccCCCCCCceeEEE-------eccCCEEEEEeCCCCeEEEEEcCCCe----eEEEEcCCCCCCc
Q psy14257 480 --------RSVIVRVDLLTSRGAWPNGLTL-------DYQLTRIYWIDAKSDSIHTVTYDGKD----HHVVLSNHDSLTH 540 (841)
Q Consensus 480 --------~~~i~~~~~~~~~~~~P~glal-------D~~~~~LYw~d~~~~~I~~~~~dG~~----~~~i~~~~~~l~~ 540 (841)
...+... ......|.|+++ + ..++||+++...++|.++++++.. ...++.. ....
T Consensus 240 g~~~~~~~~~p~~~~---~~~~~ap~G~~~y~g~~fp~-~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~--~~~r 313 (354)
T 3a9g_A 240 GKAGRGEFVDPVIDT---GSETWAPSGASFVHGDMFPG-LRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKN--VFGR 313 (354)
T ss_dssp SCCCCTTSCCCSEEC---TTCCCCEEEEEECCSSSCGG-GTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTT--TSCC
T ss_pred CCCCCCCCcCCEeec---CCCCcCCcceEEECCCCCcc-cCCcEEEEEcCCCEEEEEEECCCCcccceeeeccC--CCCC
Confidence 0111110 012346999999 5 468999999999999999998632 1233332 2568
Q ss_pred ceEEEEe-cCeEEEEeCC-CC---------eEEEEec
Q psy14257 541 PFAIALF-ENHVYWTDWR-TN---------SVIRANK 566 (841)
Q Consensus 541 P~gla~~-~~~lY~td~~-~~---------~i~~~~~ 566 (841)
|.+|++. ++.||++++. .+ +|+|+.+
T Consensus 314 p~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~ 350 (354)
T 3a9g_A 314 LRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVS 350 (354)
T ss_dssp EEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEE
T ss_pred eeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEec
Confidence 9999995 5899999974 44 7887764
No 52
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=4.7e-13 Score=142.97 Aligned_cols=240 Identities=9% Similarity=0.084 Sum_probs=159.0
Q ss_pred cccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCC
Q psy14257 247 SLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSS 326 (841)
Q Consensus 247 ~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~ 326 (841)
...-+.+..|+.+.+. |||+|...++|++.+++++. .. .+.. -..|.++++++.+ ++|+. .
T Consensus 11 ~~~~~Egp~w~~~~~~--l~~~d~~~~~i~~~d~~~~~---~~-~~~~-~~~~~~i~~~~dG-~l~v~--~--------- 71 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNS--LLFVDIPAKKVCRWDSFTKQ---VQ-RVTM-DAPVSSVALRQSG-GYVAT--I--------- 71 (297)
T ss_dssp CCSBEEEEEEETTTTE--EEEEETTTTEEEEEETTTCC---EE-EEEC-SSCEEEEEEBTTS-SEEEE--E---------
T ss_pred CCccccCCeEECCCCE--EEEEECCCCEEEEEECCCCc---EE-EEeC-CCceEEEEECCCC-CEEEE--E---------
Confidence 3445678888887666 99999999999999987654 22 2222 2478999999765 34442 1
Q ss_pred CCCEEEEccCCCcccccccc----CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCC
Q psy14257 327 DGGIEKAGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPN 402 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~~~----~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~ 402 (841)
..+|.+++.++...+.+... ....|+++++|+++ +||+++......
T Consensus 72 ~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~----------------------------- 121 (297)
T 3g4e_A 72 GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETA----------------------------- 121 (297)
T ss_dssp TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSB-----------------------------
T ss_pred CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccc-----------------------------
Confidence 23788888875555544332 34568888888753 466665321100
Q ss_pred CCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC---CC-
Q psy14257 403 CRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS---GE- 478 (841)
Q Consensus 403 ~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld---G~- 478 (841)
.+..+...+.|++++.+|+.... ...+..|++|+++|....|||++.. ..+|++++++ |.
T Consensus 122 ------------~~~~~~~~~~l~~~d~~g~~~~~--~~~~~~pngi~~spdg~~lyv~~~~--~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 122 ------------PAVLERHQGALYSLFPDHHVKKY--FDQVDISNGLDWSLDHKIFYYIDSL--SYSVDAFDYDLQTGQI 185 (297)
T ss_dssp ------------TTBCCTTCEEEEEECTTSCEEEE--EEEESBEEEEEECTTSCEEEEEEGG--GTEEEEEEECTTTCCE
T ss_pred ------------cccccCCCcEEEEEECCCCEEEE--eeccccccceEEcCCCCEEEEecCC--CCcEEEEeccCCCCcc
Confidence 00000122455566665554332 2345789999999998899999987 6899999875 32
Q ss_pred -CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEec---CeEEE
Q psy14257 479 -HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALFE---NHVYW 553 (841)
Q Consensus 479 -~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~~---~~lY~ 553 (841)
.++.+.... .....|.||++|. +++||++....++|.+++++ |.....+... ...|..+++.+ +.||+
T Consensus 186 ~~~~~~~~~~---~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p---~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 186 SNRRSVYKLE---KEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLP---VDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp EEEEEEEECC---GGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECS---SSBEEEEEEESGGGCEEEE
T ss_pred cCcEEEEECC---CCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECC---CCCceEEEEeCCCCCEEEE
Confidence 123344310 1235799999995 57999999888999999998 7766666432 35788888853 58999
Q ss_pred EeCCC
Q psy14257 554 TDWRT 558 (841)
Q Consensus 554 td~~~ 558 (841)
|....
T Consensus 259 t~~~~ 263 (297)
T 3g4e_A 259 TCARD 263 (297)
T ss_dssp EEBCT
T ss_pred EcCCc
Confidence 98653
No 53
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.55 E-value=3.4e-12 Score=135.90 Aligned_cols=267 Identities=17% Similarity=0.138 Sum_probs=175.2
Q ss_pred cccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecC
Q psy14257 230 ELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGK 309 (841)
Q Consensus 230 ~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~ 309 (841)
.+..+-......+.+..+...+.++.|+...+. |||++...+.|++.+++++ ...+......|.+|++|+.+
T Consensus 9 ~~~~~~~~~~~~~~l~~~~~~~eg~~~d~~g~~--l~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~l~~~~dg- 80 (296)
T 3e5z_A 9 EFLDLFPAGAEARRLADGFTWTEGPVYVPARSA--VIFSDVRQNRTWAWSDDGQ-----LSPEMHPSHHQNGHCLNKQG- 80 (296)
T ss_dssp GGGGGSCTTCCCEEEECCCSSEEEEEEEGGGTE--EEEEEGGGTEEEEEETTSC-----EEEEESSCSSEEEEEECTTC-
T ss_pred hHHhhcCCCCcEEEEecCCccccCCeEeCCCCE--EEEEeCCCCEEEEEECCCC-----eEEEECCCCCcceeeECCCC-
Confidence 444454455666777777778889999887555 9999999999999988764 22334455679999999754
Q ss_pred ceeEEEeeecCCCCCCCCCCEEEEcc-CCCccccccc----cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccE
Q psy14257 310 NLYMFWAFWSLSPSNSSDGGIEKAGM-HGENRSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERT 384 (841)
Q Consensus 310 ~~y~~~td~~~~~~~~~~~~I~~~~~-dG~~~~~l~~----~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~ 384 (841)
++| +++. ..++|.+++. +|+. +.+.. ..+..|++|++|++ ++||++|...+.+.. ..+
T Consensus 81 ~l~--v~~~-------~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~--~~~---- 143 (296)
T 3e5z_A 81 HLI--ACSH-------GLRRLERQREPGGEW-ESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKP--EEG---- 143 (296)
T ss_dssp CEE--EEET-------TTTEEEEECSTTCCE-EEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCG--GGS----
T ss_pred cEE--EEec-------CCCeEEEEcCCCCcE-EEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccc--ccc----
Confidence 444 3432 2357999988 5553 33321 24567899999974 467777653111000 000
Q ss_pred EEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecC
Q psy14257 385 VSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWD 464 (841)
Q Consensus 385 ~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~ 464 (841)
..-..+...+.|++++.+|+... +...+..|++|+++|....| |++..
T Consensus 144 -----------------------------~~~~~~~~~~~l~~~~~~g~~~~--~~~~~~~~~gi~~s~dg~~l-v~~~~ 191 (296)
T 3e5z_A 144 -----------------------------YGGEMELPGRWVFRLAPDGTLSA--PIRDRVKPNGLAFLPSGNLL-VSDTG 191 (296)
T ss_dssp -----------------------------SCCCCCSSSCEEEEECTTSCEEE--EECCCSSEEEEEECTTSCEE-EEETT
T ss_pred -----------------------------ccccccCCCcEEEEECCCCCEEE--eecCCCCCccEEECCCCCEE-EEeCC
Confidence 00000111245666666654432 23467889999999987777 99977
Q ss_pred CCCCeEEEecCC--CCC---cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCC
Q psy14257 465 SKAPRIERCSMS--GEH---RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLT 539 (841)
Q Consensus 465 ~~~~~I~r~~ld--G~~---~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~ 539 (841)
..+|++.+++ |+. ...+ . .....|.+|++|. +++||++. .+.|.+++++|.....+.... .
T Consensus 192 --~~~i~~~~~~~~g~~~~~~~~~-~-----~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~g~~~~~~~~~~---~ 257 (296)
T 3e5z_A 192 --DNATHRYCLNARGETEYQGVHF-T-----VEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPDGDELGRVLTPQ---T 257 (296)
T ss_dssp --TTEEEEEEECSSSCEEEEEEEE-C-----CSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTTSCEEEEEECSS---C
T ss_pred --CCeEEEEEECCCCcCcCCCeEe-e-----CCCCCCCeEEECC-CCCEEEEc--CCeEEEECCCCCEEEEEECCC---C
Confidence 6899999986 332 2233 2 3556799999995 57899998 689999999988776665432 2
Q ss_pred cceEEEEec---CeEEEEeCCCCeEEEEeccCCc
Q psy14257 540 HPFAIALFE---NHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 540 ~P~gla~~~---~~lY~td~~~~~i~~~~~~~g~ 570 (841)
|..+++.+ +.||++.. +.+++++..+.+
T Consensus 258 -~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~~ 288 (296)
T 3e5z_A 258 -TSNLCFGGPEGRTLYMTVS--TEFWSIETNVRG 288 (296)
T ss_dssp -CCEEEEESTTSCEEEEEET--TEEEEEECSCCB
T ss_pred -ceeEEEECCCCCEEEEEcC--CeEEEEEccccc
Confidence 77888742 47999874 578888865443
No 54
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.55 E-value=5e-15 Score=123.84 Aligned_cols=76 Identities=42% Similarity=1.031 Sum_probs=65.5
Q ss_pred CCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCC-CccccCCCCCCCCCCccCCCCCCCCCCCCCC-CCcccCCCCC
Q psy14257 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDE-DHCVNDCTDWSDETNCTHSGNRTISAPACEP-HEFDCQDVLR 107 (841)
Q Consensus 30 ~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde-~~C~~dC~~~~de~~C~~c~~~~~c~~~C~~-~~~~C~~~~~ 107 (841)
..|.+.+|+|. +++|||..|+|||..||. ||||| .+| .. ..|.+ .+|.|.+ +
T Consensus 3 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~--DgsDE~~~C-------------~~--------~~C~~~~~f~C~~--g 56 (82)
T 2fyj_A 3 RTCPPNQFSCA-SGRCIPISWTCDLDDDCG--DRSDESASC-------------AY--------PTCFPLTQFTCNN--G 56 (82)
T ss_dssp SSSCTTEEETT-SSCEEETTSSSSCSSSSC--STTTTTSSC-------------CC--------SSSCSSSEEECTT--S
T ss_pred CCCCCCceEeC-CCCEEeccccCCCcccCC--Ccccccccc-------------cc--------ccCCCCCceECCC--C
Confidence 57899999998 789999999999999999 88888 443 21 24644 7899997 8
Q ss_pred eEecCCCCCCCCCCCCCCCCCccc
Q psy14257 108 TCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 108 ~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
.||+.+++|||..+|.+|+||..|
T Consensus 57 ~CI~~~~~CDG~~DC~DgSDE~~C 80 (82)
T 2fyj_A 57 RCININWRCDNDNDCGDNSDEAGC 80 (82)
T ss_dssp CEEETTCBSSSSBCCSSSSSCSCC
T ss_pred CeEcHHHccCCCCcCCCCccccCC
Confidence 999999999999999999999766
No 55
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.52 E-value=2.6e-15 Score=124.47 Aligned_cols=72 Identities=40% Similarity=0.995 Sum_probs=63.2
Q ss_pred CCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCccccCCCCCCCCCCccCCCCCCCCCCCCCCCCcccCCCCCeEe
Q psy14257 31 KCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGNRTISAPACEPHEFDCQDVLRTCI 110 (841)
Q Consensus 31 ~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C~~dC~~~~de~~C~~c~~~~~c~~~C~~~~~~C~~~~~~Ci 110 (841)
+|.+.+|+|. +++|||..|+|||..||. |||||.+| .. ..|.+.+|.|.+ +.||
T Consensus 2 ~C~~~~F~C~-~g~CI~~~~~CDg~~DC~--DgSDE~~C-------------~~--------~~C~~~~f~C~~--g~Ci 55 (80)
T 2fcw_B 2 TCSQAEFRCH-DGKCISRQFVCDSDRDCL--DGSDEASC-------------PV--------LTCGPASFQCNS--STCI 55 (80)
T ss_dssp CCCTTEEECT-TSCEEEGGGTTSSSCCST--TCTTTTTH-------------HH--------HHCCTTEEECTT--SCEE
T ss_pred CCCCCccCCC-CCCEEeeecccCCcccCC--Cccccccc-------------cc--------ccCCceeeECCC--CCEE
Confidence 6889999998 799999999999999999 88887654 21 236677899987 8999
Q ss_pred cCCCCCCCCCCCCCCCCC
Q psy14257 111 PKALVCDGEPACFNGEDE 128 (841)
Q Consensus 111 ~~~~~Cdg~~~C~~g~de 128 (841)
+.+++|||..+|.+|+||
T Consensus 56 ~~~~~CDg~~DC~dgsDE 73 (80)
T 2fcw_B 56 PQLWACDNDPDCEDGSDE 73 (80)
T ss_dssp EGGGTTSSSCCSTTCGGG
T ss_pred ecccccCCCcCCCCCCCc
Confidence 999999999999999999
No 56
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.51 E-value=2.1e-12 Score=138.37 Aligned_cols=257 Identities=14% Similarity=0.209 Sum_probs=166.4
Q ss_pred cccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEee
Q psy14257 238 TFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAF 317 (841)
Q Consensus 238 ~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td 317 (841)
...++.+..+...+.+..|+...+. |||+|...++|++.+.++ . .+ .+......|.++++|+.+ ++|+ ++
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~--l~~~d~~~~~i~~~~~~g-~---~~-~~~~~~~~~~gl~~d~dG-~l~v--~~ 103 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRT--LVWSDLVGRRVLGWREDG-T---VD-VLLDATAFTNGNAVDAQQ-RLVH--CE 103 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTE--EEEEETTTTEEEEEETTS-C---EE-EEEESCSCEEEEEECTTS-CEEE--EE
T ss_pred CCceEEEecCCcCccCCeEeCCCCE--EEEEECCCCEEEEEeCCC-C---EE-EEeCCCCccceeeECCCC-CEEE--EE
Confidence 4567778888777888889887555 999999999999997743 2 22 333344579999999754 4554 33
Q ss_pred ecCCCCCCCCCCEEEEccCCCccccccc----cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeec
Q psy14257 318 WSLSPSNSSDGGIEKAGMHGENRSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLG 393 (841)
Q Consensus 318 ~~~~~~~~~~~~I~~~~~dG~~~~~l~~----~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~ 393 (841)
. ..++|.+++.+|+. +.+.. ..+..|++|++|++ ++||++|...+.... ..|..
T Consensus 104 ~-------~~~~v~~~~~~g~~-~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~--~~~~~----------- 161 (305)
T 3dr2_A 104 H-------GRRAITRSDADGQA-HLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKP--SQGCP----------- 161 (305)
T ss_dssp T-------TTTEEEEECTTSCE-EEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCG--GGSCC-----------
T ss_pred C-------CCCEEEEECCCCCE-EEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCcccc--ccccc-----------
Confidence 2 23589999988763 33322 24567999999974 568888753221000 00000
Q ss_pred CCCccccCCCCCCccccccceEEEEecCCCcEEEEccC-CceEEEEecCCCCCceeEEEcCCCCeEEEEecCC---CCCe
Q psy14257 394 SDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS-GQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDS---KAPR 469 (841)
Q Consensus 394 ~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~---~~~~ 469 (841)
...+...+.|++++.+ |+.... . .+..|++|+++|....||+++... ...+
T Consensus 162 ----------------------~~~~~~~~~v~~~d~~~g~~~~~-~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~ 216 (305)
T 3dr2_A 162 ----------------------ADPELAHHSVYRLPPDGSPLQRM-A--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVE 216 (305)
T ss_dssp ----------------------CCCSSSCEEEEEECSSSCCCEEE-E--EESSEEEEEECTTSSEEEEEECCC---CCCE
T ss_pred ----------------------cccccCCCeEEEEcCCCCcEEEE-e--cCCCCcceEEcCCCCEEEEEecCCcCCCCCE
Confidence 0000112345555553 333322 2 557899999999988899999751 0268
Q ss_pred EEEecCCCCC---cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEE
Q psy14257 470 IERCSMSGEH---RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIAL 546 (841)
Q Consensus 470 I~r~~ldG~~---~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~ 546 (841)
|+++++++.. .+.+.. .....|.||++|. .++||++. .+.|.+++++|.....+.... .|..+++
T Consensus 217 i~~~~~~~~~l~~~~~~~~-----~~~~~pdgi~~d~-~G~lwv~~--~~gv~~~~~~g~~~~~~~~~~----~~~~~~f 284 (305)
T 3dr2_A 217 ITAFAWRDGALHDRRHFAS-----VPDGLPDGFCVDR-GGWLWSSS--GTGVCVFDSDGQLLGHIPTPG----TASNCTF 284 (305)
T ss_dssp EEEEEEETTEEEEEEEEEC-----CSSSCCCSEEECT-TSCEEECC--SSEEEEECTTSCEEEEEECSS----CCCEEEE
T ss_pred EEEEEecCCCccCCeEEEE-----CCCCCCCeEEECC-CCCEEEec--CCcEEEECCCCCEEEEEECCC----ceeEEEE
Confidence 9999987643 222222 2346799999995 56788877 457999999998777665431 4777777
Q ss_pred --ecCeEEEEeCCCCeEEEEe
Q psy14257 547 --FENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 547 --~~~~lY~td~~~~~i~~~~ 565 (841)
.++.||++.. +.+++++
T Consensus 285 ~~d~~~L~it~~--~~l~~~~ 303 (305)
T 3dr2_A 285 DQAQQRLFITGG--PCLWMLP 303 (305)
T ss_dssp CTTSCEEEEEET--TEEEEEE
T ss_pred eCCCCEEEEEcC--CeEEEEE
Confidence 3467998874 4676664
No 57
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.50 E-value=1.7e-12 Score=141.82 Aligned_cols=239 Identities=13% Similarity=0.124 Sum_probs=161.1
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccc------cccCcCCCceEEEEccCCEEEEEeCC-
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPL------VTKNIQWPSSLVIDYNQDILYWCDSH- 369 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l------~~~~~~~P~glavD~~~~~lYwaD~~- 369 (841)
..|.|||+++.+ ++|+....|... ..+|.+.+ +|+. .++ ....+..|.||++|.. ++|||+|..
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~-----~~~l~~~~-~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~ 87 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQP-----EMQVAELT-QDGL-IPFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGN 87 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCC-----SCSEEEEE-TTEE-EESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHH
T ss_pred CCcceEEECCCC-CEEEEeCCCCCC-----ceEEEEEC-CCCe-ecCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCC
Confidence 589999999653 555543333210 14788777 6642 222 1235789999999987 789999986
Q ss_pred ----CCeEEEEEecCCccEEEEeeeeecCCCccccCC--CCCCccccccceEEEEec---CCCcEEEEccC-CceEEEEe
Q psy14257 370 ----LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPN--CRPEDNLWIGKNLYWVES---NLDQIEVAKLS-GQFRRTLI 439 (841)
Q Consensus 370 ----~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~--~~~~avdw~~~~LY~tD~---~~~~I~v~~~~-G~~~~~l~ 439 (841)
.++|.+++++.......+.... ..+.+. ...+++|..++.+|++|. ..+.|.+++++ |+..+++-
T Consensus 88 ~~~~~~~i~~~d~~tg~~~~~~~~~~-----~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNNQLSRVIYLPP-----PITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp HHTSCCEEEEEETTTTEEEEEEECCT-----TTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECT
T ss_pred CcCCCCeEEEEECCCCeEEEEEECCh-----hhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEec
Confidence 6899999997554332222210 000000 112355655689999998 78899999986 55444331
Q ss_pred c-------------CC---------------CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC----CCC--c-----
Q psy14257 440 A-------------GD---------------MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS----GEH--R----- 480 (841)
Q Consensus 440 ~-------------~~---------------l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld----G~~--~----- 480 (841)
. .+ ...|.|||++|+...||+++.. ..+|++++.+ +.. .
T Consensus 163 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T 2qe8_A 163 GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH--STSMYRIKSADLSNLQLTDAELGSK 240 (343)
T ss_dssp TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS--CSEEEEEEHHHHTCTTCCHHHHHTT
T ss_pred CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC--CCeEEEEEHHHhcCCCCChhhhhcc
Confidence 1 00 1358999999988899999987 5799998752 221 1
Q ss_pred -EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc-CCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCC
Q psy14257 481 -SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY-DGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWR 557 (841)
Q Consensus 481 -~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~-dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~ 557 (841)
..+. ....|.||++|. +++||+++...++|.++++ +|+ ..++.... .+..|.++++. +++||+++..
T Consensus 241 ~~~~g-------~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~-~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 241 IERYS-------EKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRA-YKLLVTDE-KLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp CEEEE-------ECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTE-EEEEEECG-GGSCEEEEEECTTSCEEEEECC
T ss_pred eEecc-------cCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCC-EEEEEECC-ceecCCeeEECCCCcEEEEeCc
Confidence 1121 234799999996 5899999999999999999 775 44454432 46789999994 6899999976
Q ss_pred CCeE
Q psy14257 558 TNSV 561 (841)
Q Consensus 558 ~~~i 561 (841)
.+++
T Consensus 311 ~~~~ 314 (343)
T 2qe8_A 311 LHHS 314 (343)
T ss_dssp GGGS
T ss_pred cccc
Confidence 6544
No 58
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.49 E-value=1.1e-10 Score=126.53 Aligned_cols=276 Identities=13% Similarity=0.116 Sum_probs=182.6
Q ss_pred CCceeEEEcCCCCeEEEEecCCC----CCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEE
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSK----APRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIH 519 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~----~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~ 519 (841)
..|.+++++|..++||++..+.. .++|+..+++.......+. ....|.++++++.+++||+++...+.|.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~v~~~~~~~v~ 114 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH------NDLKPFGATINNTTQTLWFGNTVNSAVT 114 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE------ESSCCCSEEEETTTTEEEEEETTTTEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe------cCCCcceEEECCCCCEEEEEecCCCEEE
Confidence 46899999999899999986521 4589999987554444433 1245899999998889999999889999
Q ss_pred EEEcCCCee-EEEEcCCCC------CCcceEEEEe--cCeEEEEeCC-CCeEEEEeccCCcceEEEecccCCCceeccCC
Q psy14257 520 TVTYDGKDH-HVVLSNHDS------LTHPFAIALF--ENHVYWTDWR-TNSVIRANKWNGSDVTLIQRTLTQPFIYVNGV 589 (841)
Q Consensus 520 ~~~~dG~~~-~~i~~~~~~------l~~P~gla~~--~~~lY~td~~-~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp 589 (841)
.+++..... ..+...... ..+|.++++. ++++|++++. .+.|..++..+++....+......
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------- 186 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM-------- 186 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--------
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--------
Confidence 999975544 444322111 1137888884 4679999954 677888887766544433211000
Q ss_pred cccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEecCCCCccccceeecC--
Q psy14257 590 VKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDLEHPYYHTIPTISIP-- 666 (841)
Q Consensus 590 ~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l~~~~~~~~~~~~~~-- 666 (841)
|.+..+.+|+. +|+++ ..+.|..+++..... ...++..
T Consensus 187 -----------------------------~~~~~~s~dg~--------~l~~~~~~~~i~~~d~~~~~~--~~~~~~~~~ 227 (353)
T 3vgz_A 187 -----------------------------STGLALDSEGK--------RLYTTNADGELITIDTADNKI--LSRKKLLDD 227 (353)
T ss_dssp -----------------------------CCCCEEETTTT--------EEEEECTTSEEEEEETTTTEE--EEEEECCCS
T ss_pred -----------------------------cceEEECCCCC--------EEEEEcCCCeEEEEECCCCeE--EEEEEcCCC
Confidence 11122223321 22222 234555555543221 1122221
Q ss_pred -CCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEE
Q psy14257 667 -QVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAI 745 (841)
Q Consensus 667 -~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAv 745 (841)
....+.+++|++..+.+|+++...+.|+.+++.... ....+. ...|.++++
T Consensus 228 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--------------------------~~~~~~--~~~~~~~~~ 279 (353)
T 3vgz_A 228 GKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--------------------------ILAKVA--APESLAVLF 279 (353)
T ss_dssp SSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--------------------------EEEEEE--CSSCCCEEE
T ss_pred CCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--------------------------EEEEEE--cCCCceEEE
Confidence 123467899999999999999888999999986544 111222 345789999
Q ss_pred eecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecC
Q psy14257 746 DWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVT 809 (841)
Q Consensus 746 D~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~ 809 (841)
++.++.||++ +...++|.++++........+.. -..|.+|+++|...+||++...
T Consensus 280 s~dg~~l~v~--~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 280 NPARNEAYVT--HRQAGKVSVIDAKSYKVVKTFDT-------PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ETTTTEEEEE--ETTTTEEEEEETTTTEEEEEEEC-------CSEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCCEEEEE--ECCCCeEEEEECCCCeEEEEEec-------CCCCCeEEEcCCCCEEEEEEcc
Confidence 9999999999 45678999999865433333333 3589999999998899999876
No 59
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.49 E-value=4.6e-11 Score=129.67 Aligned_cols=271 Identities=12% Similarity=0.081 Sum_probs=181.5
Q ss_pred ceeeecccccCCcceeEEEecC------CCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVI------DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPS 323 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~------~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~ 323 (841)
.+.++.|+...+. ||+++.. .++|++.++.++. .... +.. ...|.++++++.++.+|+ ++.
T Consensus 42 ~~~~~~~s~dg~~--l~~~~~~~~~~~~~~~v~~~d~~~~~--~~~~-~~~-~~~~~~~~~s~dg~~l~v--~~~----- 108 (353)
T 3vgz_A 42 GAYEMAYSQQENA--LWLATSQSRKLDKGGVVYRLDPVTLE--VTQA-IHN-DLKPFGATINNTTQTLWF--GNT----- 108 (353)
T ss_dssp SEEEEEEETTTTE--EEEEECCCTTTEESEEEEEECTTTCC--EEEE-EEE-SSCCCSEEEETTTTEEEE--EET-----
T ss_pred CccceEECCCCCE--EEEEcCCCcCCCCCccEEEEcCCCCe--EEEE-Eec-CCCcceEEECCCCCEEEE--Eec-----
Confidence 4566777775555 9998865 5689888877654 2222 222 246999999987654554 432
Q ss_pred CCCCCCEEEEccCCCc-cccccccCcC--------CCceEEEEccCCEEEEEeC-CCCeEEEEEecCCccEEEEeeeeec
Q psy14257 324 NSSDGGIEKAGMHGEN-RSPLVTKNIQ--------WPSSLVIDYNQDILYWCDS-HLNTVESVRVDGSERTVSFNLEVLG 393 (841)
Q Consensus 324 ~~~~~~I~~~~~dG~~-~~~l~~~~~~--------~P~glavD~~~~~lYwaD~-~~~~I~~~~ldG~~~~~~~~~~~~~ 393 (841)
.++.|..++..... ...+....-. .|.++++++++++||+++. ..+.|+.+++........+... +
T Consensus 109 --~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~ 184 (353)
T 3vgz_A 109 --VNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNT--G 184 (353)
T ss_dssp --TTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCC--C
T ss_pred --CCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCC--C
Confidence 24588888875433 3333222111 2789999999999999994 5788999998765544333210 0
Q ss_pred CCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecC----CCCCceeEEEcCCCCeEEEEecCCCCCe
Q psy14257 394 SDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAG----DMESPRAIALDPRFGLLFWTDWDSKAPR 469 (841)
Q Consensus 394 ~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~----~l~~P~giavd~~~g~Ly~td~~~~~~~ 469 (841)
. . ...++++..++.||+++. .+.|.++++........+.. ....|.+++++|.+++||+++.. .+.
T Consensus 185 ~-~------~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~ 254 (353)
T 3vgz_A 185 K-M------STGLALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--AAE 254 (353)
T ss_dssp T-T------CCCCEEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--SSE
T ss_pred C-c------cceEEECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--CCE
Confidence 0 0 011244455678999876 67899998865443322222 23467889999999999999976 689
Q ss_pred EEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--
Q psy14257 470 IERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-- 547 (841)
Q Consensus 470 I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-- 547 (841)
|...++........+. +..|.++++++.+++||+++...+.|..+++........+.. -..|.++++.
T Consensus 255 v~~~d~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~d 324 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVA-------APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT---PTHPNSLALSAD 324 (353)
T ss_dssp EEEEETTTCCEEEEEE-------CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC---CSEEEEEEECTT
T ss_pred EEEEECCCCcEEEEEE-------cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec---CCCCCeEEEcCC
Confidence 9999986544333333 345789999998889999998889999999976544433333 2478999984
Q ss_pred cCeEEEEeCC
Q psy14257 548 ENHVYWTDWR 557 (841)
Q Consensus 548 ~~~lY~td~~ 557 (841)
+.+||++...
T Consensus 325 g~~l~v~~~~ 334 (353)
T 3vgz_A 325 GKTLYVSVKQ 334 (353)
T ss_dssp SCEEEEEEEC
T ss_pred CCEEEEEEcc
Confidence 3569998765
No 60
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.45 E-value=1.3e-11 Score=131.90 Aligned_cols=261 Identities=13% Similarity=0.148 Sum_probs=166.4
Q ss_pred EEEEeccccceeeecccccCCcceeEEE-------ecCCCeEEEEEecCCcccceEEEEe----CCCCCccceEEeeecC
Q psy14257 241 VIALISSLKNTIALDFYYTPTANMVFWT-------DVIDDKIYNATLIGNSLSNIDVVVQ----TGLSTAEGLAVDWIGK 309 (841)
Q Consensus 241 ~~~l~~~~~~~~avd~~~~~~~~~lyw~-------d~~~~~I~~~~~~~~~~~~~~~~~~----~~l~~p~giavD~~~~ 309 (841)
...+..++..+.++.|+ .++. |||+ +...+.|++.++.++.+ ..+.. .....|.++++|+.++
T Consensus 10 ~~~~~~~~~~~~~~~~~-~~g~--l~~~~~~~~~~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~~~~~~~i~~~~~~g 83 (314)
T 1pjx_A 10 FTKVTEDIPGAEGPVFD-KNGD--FYIVAPEVEVNGKPAGEILRIDLKTGKK---TVICKPEVNGYGGIPAGCQCDRDAN 83 (314)
T ss_dssp CEEEECCCTTCEEEEEC-TTSC--EEEEETTCEETTEECCEEEEECTTTCCE---EEEECCEETTEECCEEEEEECSSSS
T ss_pred HhhhhccCCCccCceEC-CCCC--EEEEEeccccCCCCCCEEEEEeCCCCcE---EEEEecccCCCCCCCceEEEecCCC
Confidence 34556677778888888 4456 9999 88889999998765542 22221 0124689999997533
Q ss_pred ceeEEEeeecCCCCCCCCCCEEEEccCCCccccc-cc----cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccE
Q psy14257 310 NLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPL-VT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERT 384 (841)
Q Consensus 310 ~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l-~~----~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~ 384 (841)
++|+ ++. ..+|.+++.+|+. ..+ .. .....|.+|++|++ ++||+++...+.+.. +
T Consensus 84 ~l~v--~~~--------~~~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~---~----- 143 (314)
T 1pjx_A 84 QLFV--ADM--------RLGLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPA---D----- 143 (314)
T ss_dssp EEEE--EET--------TTEEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTS---C-----
T ss_pred cEEE--EEC--------CCCEEEEeCCCCE-EEEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccc---c-----
Confidence 4554 332 1379999888543 333 21 23457999999975 467777653210000 0
Q ss_pred EEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEc----CCCCeEEE
Q psy14257 385 VSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALD----PRFGLLFW 460 (841)
Q Consensus 385 ~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd----~~~g~Ly~ 460 (841)
+... .....+.|.+++.+|+..... ..+..|.+|+++ +.++.||+
T Consensus 144 -------------------------~~~~----~~~~~~~l~~~~~~g~~~~~~--~~~~~~~~i~~~~~~d~dg~~l~v 192 (314)
T 1pjx_A 144 -------------------------YTRS----MQEKFGSIYCFTTDGQMIQVD--TAFQFPNGIAVRHMNDGRPYQLIV 192 (314)
T ss_dssp -------------------------CCBT----TSSSCEEEEEECTTSCEEEEE--EEESSEEEEEEEECTTSCEEEEEE
T ss_pred -------------------------cccc----ccCCCCeEEEECCCCCEEEec--cCCCCcceEEEecccCCCCCEEEE
Confidence 0000 001123555565555433222 234679999999 88668999
Q ss_pred EecCCCCCeEEEecCCCCCc----EEEEEecccCCCC-CCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcC
Q psy14257 461 TDWDSKAPRIERCSMSGEHR----SVIVRVDLLTSRG-AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSN 534 (841)
Q Consensus 461 td~~~~~~~I~r~~ldG~~~----~~i~~~~~~~~~~-~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~ 534 (841)
++.. ..+|++.++++... ..+... .... ..|.+|++|. +++||+++...+.|.+++++ |.....+...
T Consensus 193 ~~~~--~~~i~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 266 (314)
T 1pjx_A 193 AETP--TKKLWSYDIKGPAKIENKKVWGHI---PGTHEGGADGMDFDE-DNNLLVANWGSSHIEVFGPDGGQPKMRIRCP 266 (314)
T ss_dssp EETT--TTEEEEEEEEETTEEEEEEEEEEC---CCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred EECC--CCeEEEEECCCCCccccceEEEEC---CCCCCCCCCceEECC-CCCEEEEEcCCCEEEEEcCCCCcEeEEEeCC
Confidence 9976 68999998763221 122221 1122 5799999995 67999999888899999998 7665555322
Q ss_pred CCCCCcceEEEEe-cC-eEEEEeCCCCeEEEEecc
Q psy14257 535 HDSLTHPFAIALF-EN-HVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 535 ~~~l~~P~gla~~-~~-~lY~td~~~~~i~~~~~~ 567 (841)
...|.++++. ++ +||+++...+.|.+++..
T Consensus 267 ---~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 267 ---FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ---SSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ---CCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 3578999984 34 499999888899988764
No 61
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.44 E-value=3.9e-11 Score=131.26 Aligned_cols=114 Identities=11% Similarity=0.110 Sum_probs=83.1
Q ss_pred CCCCceeEEEcCC---CCeEEEEecC-CCC----CeEEEecCCCC-----CcEEEEEecccCCCCCCceeEEEeccCCEE
Q psy14257 442 DMESPRAIALDPR---FGLLFWTDWD-SKA----PRIERCSMSGE-----HRSVIVRVDLLTSRGAWPNGLTLDYQLTRI 508 (841)
Q Consensus 442 ~l~~P~giavd~~---~g~Ly~td~~-~~~----~~I~r~~ldG~-----~~~~i~~~~~~~~~~~~P~glalD~~~~~L 508 (841)
+...|.|||++|. +|+||+++.. ... .+|.|+++++. ..++++.. +.......|++|++++ .++|
T Consensus 71 g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~-~~~~~~h~~~~l~~~p-DG~L 148 (354)
T 3a9g_A 71 GEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDG-IPGAYIHNGGRIRFGP-DGML 148 (354)
T ss_dssp TTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEE-EECCSSCCCCCEEECT-TSCE
T ss_pred CCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEc-CCCCCCcCCceEEECC-CCcE
Confidence 4567999999998 8999999852 112 68999998875 23344331 1123456799999997 5689
Q ss_pred EEEeCC-------------CCeEEEEEcCCC--------eeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCe
Q psy14257 509 YWIDAK-------------SDSIHTVTYDGK--------DHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNS 560 (841)
Q Consensus 509 Yw~d~~-------------~~~I~~~~~dG~--------~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~ 560 (841)
|++... .++|.+++++|+ ..+++..+ +.+|.||++. .+.||++|...+.
T Consensus 149 yvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G---~rnp~Gla~d~~~g~l~v~d~g~~~ 220 (354)
T 3a9g_A 149 YITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYG---HRNPQGIDWHRASGVMVATEHGPVG 220 (354)
T ss_dssp EEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEEC---CSCCCEEEECTTTCCEEEEECCSSS
T ss_pred EEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEc---cCCcceEEEeCCCCCEEEEecCCCC
Confidence 999632 368999999997 34444433 6789999996 4899999987654
No 62
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.43 E-value=2e-10 Score=124.77 Aligned_cols=267 Identities=15% Similarity=0.134 Sum_probs=166.0
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccc--cCcCCCceEEEEccCCEEEEEeCCCCe
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNT 372 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~--~~~~~P~glavD~~~~~lYwaD~~~~~ 372 (841)
....|.++|+++.++ +|+ ++.. ..++.|..+++++...+.+.. .....|.+|++++++++||+++...+.
T Consensus 38 ~~~~p~~~a~spdg~-l~~--~~~~-----~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 38 ATQNPTYLALSAKDC-LYS--VDKE-----DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGT 109 (347)
T ss_dssp ECSCCCCEEECTTCE-EEE--EEEE-----TTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTE
T ss_pred ccCCcceEEEccCCe-EEE--EEec-----CCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCE
Confidence 346899999998664 554 3321 123588898887655444432 356789999999999999999998899
Q ss_pred EEEEEecCC-ccEEEEeeeeecCCCc--cccCCCCCCccccccceEEEEecCCCcEEEEccC--CceEEE--EecCCCCC
Q psy14257 373 VESVRVDGS-ERTVSFNLEVLGSDSR--VGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS--GQFRRT--LIAGDMES 445 (841)
Q Consensus 373 I~~~~ldG~-~~~~~~~~~~~~~~~~--~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~--G~~~~~--l~~~~l~~ 445 (841)
|..++++.. ..+.+......+.... ...+....++++..++ ||+++...++|.+++++ |+.... +....-..
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~ 188 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFG 188 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCC
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCC
Confidence 999988532 2333322211111000 0000000123444445 99999999999999887 433221 11222347
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCC-CCc-EEEEEecccCC---CCCCceeEEEeccCCEEEEEeCCCCeEEE
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSG-EHR-SVIVRVDLLTS---RGAWPNGLTLDYQLTRIYWIDAKSDSIHT 520 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG-~~~-~~i~~~~~~~~---~~~~P~glalD~~~~~LYw~d~~~~~I~~ 520 (841)
|++++++|+..+||+++.. ...|...+++. +.. +.+........ ....|.++++++++++||+++...+.|..
T Consensus 189 p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 189 PRHLVFSPDGQYAFLAGEL--SSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAV 266 (347)
T ss_dssp EEEEEECTTSSEEEEEETT--TTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEE
T ss_pred CceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEE
Confidence 9999999998889999876 56777776664 222 22222111111 12458899999988899999988889999
Q ss_pred EEcCCC-eeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEE--eccCCcce
Q psy14257 521 VTYDGK-DHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRA--NKWNGSDV 572 (841)
Q Consensus 521 ~~~dG~-~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~--~~~~g~~~ 572 (841)
++++.. ..+.+.........|.+|++. +.+||+++...+.|..+ +..+|+-.
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 987622 222222111112468899984 45799999887776544 65556533
No 63
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.43 E-value=6.6e-12 Score=137.50 Aligned_cols=257 Identities=11% Similarity=0.073 Sum_probs=163.2
Q ss_pred EEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccc------ccCcCCCceEEEEcc---C
Q psy14257 290 VVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLV------TKNIQWPSSLVIDYN---Q 360 (841)
Q Consensus 290 ~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~------~~~~~~P~glavD~~---~ 360 (841)
.++..++..|.+|++++.++.+| +++. .++|.+.+.+|....++. ......|.||+++++ +
T Consensus 11 ~~va~~l~~P~~i~~~pdG~~l~--V~e~--------~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~ 80 (353)
T 2g8s_A 11 EVLQDKLDHPWALAFLPDNHGML--ITLR--------GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQS 80 (353)
T ss_dssp EEEEEEESSEEEEEECSTTCCEE--EEET--------TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHH
T ss_pred EEEECCCCCcEEEEEcCCCCEEE--EEeC--------CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCC
Confidence 34455789999999998653344 4543 369999988876433222 223456899999986 8
Q ss_pred CEEEEEeCC-------CCeEEEEEecCCc-----cEEEEeeeeecCCCccccCCCCCCccccccceEEEEecC-------
Q psy14257 361 DILYWCDSH-------LNTVESVRVDGSE-----RTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN------- 421 (841)
Q Consensus 361 ~~lYwaD~~-------~~~I~~~~ldG~~-----~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~------- 421 (841)
++||+++.. ..+|.|+++++.. .++++..... ...+......++++. .++||++...
T Consensus 81 g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~---~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~ 156 (353)
T 2g8s_A 81 RRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPK---LSTGNHFGGRLVFDG-KGYLFIALGENNQRPTA 156 (353)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSC---CBSSSCCCCCEEECS-SSEEEEEECCTTCGGGG
T ss_pred CEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCC---CCCCcccCccEEECC-CCcEEEEECCCCCCCcc
Confidence 999999865 4689999997642 2222211000 000000111223333 3699999633
Q ss_pred ------CCcEEEEccCCce------------EEEEecCCCCCceeEEEcCCCCeEEEEecCCC-CCeEEEecCCCCC---
Q psy14257 422 ------LDQIEVAKLSGQF------------RRTLIAGDMESPRAIALDPRFGLLFWTDWDSK-APRIERCSMSGEH--- 479 (841)
Q Consensus 422 ------~~~I~v~~~~G~~------------~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~-~~~I~r~~ldG~~--- 479 (841)
.++|.+++.+|+. ...+...++.+|.+|++|+..|.||++|.+.. ...|.++...+.-
T Consensus 157 q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp 236 (353)
T 2g8s_A 157 QDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWP 236 (353)
T ss_dssp GCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTT
T ss_pred CCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCC
Confidence 3689999999872 22234457889999999998899999997621 1134443221110
Q ss_pred ------------------------cEEEEEecccCCCCCCceeEEEec------cCCEEEEEeCCCCeEEEEEcCCCee-
Q psy14257 480 ------------------------RSVIVRVDLLTSRGAWPNGLTLDY------QLTRIYWIDAKSDSIHTVTYDGKDH- 528 (841)
Q Consensus 480 ------------------------~~~i~~~~~~~~~~~~P~glalD~------~~~~LYw~d~~~~~I~~~~~dG~~~- 528 (841)
...+... .....|.|+++.. ..+.||+++...++|.++++++...
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~----~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~ 312 (353)
T 2g8s_A 237 LATWGINYSGFKIPEAKGEIVAGTEQPVFYW----KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT 312 (353)
T ss_dssp TBCSSBCTTSSCCTTCCBSSCTTSCCCSEEE----SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE
T ss_pred CccCCCCCCCCccCcccCCCCCCccCCeEEe----CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe
Confidence 0000000 1124699999974 2489999999999999999987532
Q ss_pred --EEEEcCCCCCCcceEEEEe-cCeEEEE-eCCCCeEEEEec
Q psy14257 529 --HVVLSNHDSLTHPFAIALF-ENHVYWT-DWRTNSVIRANK 566 (841)
Q Consensus 529 --~~i~~~~~~l~~P~gla~~-~~~lY~t-d~~~~~i~~~~~ 566 (841)
..++. ....+|.+|++. +|.||++ |..+++|+|+.+
T Consensus 313 ~~~~~~~--~~~~rp~~v~~~pdG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 313 EDGRILT--DRGQRIRDVRTGPDGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEEEESG--GGCCCEEEEEECTTSCEEEEECSTTEEEEEEEC
T ss_pred eeEEccc--CCCCceeEEEECCCCcEEEEEeCCCCEEEEEeC
Confidence 11222 124589999995 6899996 667889998863
No 64
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.42 E-value=4.2e-10 Score=121.20 Aligned_cols=309 Identities=13% Similarity=0.133 Sum_probs=186.5
Q ss_pred ceEEEEecCCCcEEEEccC--CceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC--CCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLS--GQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS--GEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~--G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld--G~~~~~i~~~~~ 488 (841)
+.||+++...+.|.+.+++ |.............|.+++++|.+.+||++... .+.|...+++ +...+.+...
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~~~v~~~~~~~~~~~~~~~~~~-- 80 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRP--EFRVLAYRIAPDDGALTFAAES-- 80 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETT--TTEEEEEEECTTTCCEEEEEEE--
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecC--CCeEEEEEecCCCCceeecccc--
Confidence 7789998888999999886 443322222234689999999998899999976 4677776665 4443333321
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEe
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~ 565 (841)
..-..|.++++++.++.||++....+.|..++++ |.....+... .....|.++++. +.+||+++...+.|..++
T Consensus 81 --~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 81 --ALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp --ECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred --ccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 1123799999999888999999878889998883 3222222211 123467888885 357999997788888877
Q ss_pred ccC-CcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee--
Q psy14257 566 KWN-GSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-- 642 (841)
Q Consensus 566 ~~~-g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-- 642 (841)
..+ ++...+....... +.+ . . .. +..+.+| ..+|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~-------~~~----------~---------~-~~-----~~~~~pd--------g~~l~~~~~ 197 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTT-------VEG----------A---------G-PR-----HMVFHPN--------EQYAYCVNE 197 (343)
T ss_dssp ECTTSCEEEEEEEEEEC-------STT----------C---------C-EE-----EEEECTT--------SSEEEEEET
T ss_pred ecCCCceeeeccccccc-------CCC----------C---------C-cc-----eEEECCC--------CCEEEEEeC
Confidence 655 4322211000000 000 0 0 00 0111222 1223333
Q ss_pred cCCeEEEEecCCCCccc--cce---eec--CCCCCceEEEEecCCCEEEEEECCCCeEEEEEcc--cCceeeeeeeeeee
Q psy14257 643 RPREIRGVDLEHPYYHT--IPT---ISI--PQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIV--GGQIQLVVDAVFEF 713 (841)
Q Consensus 643 ~~~~i~~~~l~~~~~~~--~~~---~~~--~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~--g~~~~~~~~~~~~~ 713 (841)
....|..++++...... ... ++. .....+.+++|++..+.||++....+.|...+++ +...+
T Consensus 198 ~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~--------- 268 (343)
T 1ri6_A 198 LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLS--------- 268 (343)
T ss_dssp TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEE---------
T ss_pred CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceE---------
Confidence 23456666664321110 101 111 1123566899999999999999888999998887 32210
Q ss_pred ecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc--ceEEEEc--CCCCCCCcCC
Q psy14257 714 YLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE--YQTTILS--NESNDTSTLS 789 (841)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~--~~~~~~~--~~~~~~~~l~ 789 (841)
....+... ..|.+|++++.++.||++ ....+.|.+++++.. ..+.+.. . -.
T Consensus 269 ---------------~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~~~~v~v~~~d~~~g~~~~~~~~~~-------g~ 323 (343)
T 1ri6_A 269 ---------------KEGFQPTE-TQPRGFNVDHSGKYLIAA--GQKSHHISVYEIVGEQGLLHEKGRYAV-------GQ 323 (343)
T ss_dssp ---------------EEEEEECS-SSCCCEEECTTSSEEEEE--CTTTCEEEEEEEETTTTEEEEEEEEEC-------SS
T ss_pred ---------------EeeeecCC-CccceEEECCCCCEEEEe--cCCCCeEEEEEEcCCCceeeEcccccc-------CC
Confidence 11112222 349999999999999999 456789999977632 2222222 2 36
Q ss_pred CceEEEEeCCCCe
Q psy14257 790 KISSIAVWPVKGK 802 (841)
Q Consensus 790 ~p~~iavd~~~g~ 802 (841)
.|.+|++++..+.
T Consensus 324 ~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 324 GPMWVVVNAHEGG 336 (343)
T ss_dssp SCCEEEEEEEC--
T ss_pred CCeeEEEEcccCC
Confidence 8999999986543
No 65
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.42 E-value=2.9e-11 Score=128.56 Aligned_cols=204 Identities=15% Similarity=0.161 Sum_probs=146.1
Q ss_pred ccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCc
Q psy14257 345 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQ 424 (841)
Q Consensus 345 ~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~ 424 (841)
...+..|.|+++|++++.|||++...+.|+++++++. .+.+... .....++ +++. .++||+++...+.
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~----~~~~~~l------~~~~-dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHP----SHHQNGH------CLNK-QGHLIACSHGLRR 91 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESS----CSSEEEE------EECT-TCCEEEEETTTTE
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECC----CCCccee------eECC-CCcEEEEecCCCe
Confidence 3567889999999999999999999999999999987 4443211 0111111 2222 3789999988889
Q ss_pred EEEEcc-CCceEEEEec---CCCCCceeEEEcCCCCeEEEEec--CC-------------CCCeEEEecCCCCCcEEEEE
Q psy14257 425 IEVAKL-SGQFRRTLIA---GDMESPRAIALDPRFGLLFWTDW--DS-------------KAPRIERCSMSGEHRSVIVR 485 (841)
Q Consensus 425 I~v~~~-~G~~~~~l~~---~~l~~P~giavd~~~g~Ly~td~--~~-------------~~~~I~r~~ldG~~~~~i~~ 485 (841)
|.++++ +|+....+.. ..+..|++|++|+. |.||+||. +. ....|++++.+|... .+ .
T Consensus 92 i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~-~ 168 (296)
T 3e5z_A 92 LERQREPGGEWESIADSFEGKKLNSPNDVCLAPD-GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLS-AP-I 168 (296)
T ss_dssp EEEECSTTCCEEEEECEETTEECCCCCCEEECTT-SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEE-EE-E
T ss_pred EEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC-CCEEEECCccccccccccccccccCCCcEEEEECCCCCEE-Ee-e
Confidence 999998 6665433221 12467899999985 88999874 10 135899999885432 22 3
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC--CCe---eEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCC
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD--GKD---HHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTN 559 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d--G~~---~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~ 559 (841)
..+..|+|+++++.++.| |++...++|++++++ |.. .+.+ .. ....|.+|++. +|+||++. .+
T Consensus 169 -----~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~--~~~~p~~i~~d~~G~l~v~~--~~ 237 (296)
T 3e5z_A 169 -----RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TV--EPGKTDGLRVDAGGLIWASA--GD 237 (296)
T ss_dssp -----CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CC--SSSCCCSEEEBTTSCEEEEE--TT
T ss_pred -----cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eC--CCCCCCeEEECCCCCEEEEc--CC
Confidence 467889999999877777 999999999999985 443 3333 22 35678999995 58999998 67
Q ss_pred eEEEEeccCCcceEEE
Q psy14257 560 SVIRANKWNGSDVTLI 575 (841)
Q Consensus 560 ~i~~~~~~~g~~~~~i 575 (841)
.|.++++. |+....+
T Consensus 238 ~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 238 GVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEEEECTT-SCEEEEE
T ss_pred eEEEECCC-CCEEEEE
Confidence 89999875 5544433
No 66
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.41 E-value=5.3e-10 Score=120.45 Aligned_cols=285 Identities=12% Similarity=0.087 Sum_probs=180.0
Q ss_pred eeEEEecCCCeEEEEEecC-CcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccC--CCcc
Q psy14257 264 MVFWTDVIDDKIYNATLIG-NSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH--GENR 340 (841)
Q Consensus 264 ~lyw~d~~~~~I~~~~~~~-~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d--G~~~ 340 (841)
.||+++...+.|...+++. +.. ...........|.++++++.++.+|+ +.. .++.|..++++ +...
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~--~~~-------~~~~v~~~~~~~~~~~~ 74 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL--TLTQVVDVPGQVQPMVVSPDKRYLYV--GVR-------PEFRVLAYRIAPDDGAL 74 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE--EEEEEEECSSCCCCEEECTTSSEEEE--EET-------TTTEEEEEEECTTTCCE
T ss_pred EEEEeCCCCCeEEEEEECCCCcE--EEeeeEecCCCCceEEECCCCCEEEE--eec-------CCCeEEEEEecCCCCce
Confidence 4888888888998888753 221 11111223457999999987654554 332 23578887776 4333
Q ss_pred ccccc-cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEec-CCccEEEEeeeeecCCCccccCCCCCCccccccceEEEE
Q psy14257 341 SPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWV 418 (841)
Q Consensus 341 ~~l~~-~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ld-G~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~t 418 (841)
+.+.. ..-..|.+++++++++.||++....+.|..++++ |...+.+........ ...++++..++.||++
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~--------~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 75 TFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDG--------CHSANISPDNRTLWVP 146 (343)
T ss_dssp EEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTT--------BCCCEECTTSSEEEEE
T ss_pred eeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCC--------ceEEEECCCCCEEEEe
Confidence 33321 1233899999999999999999988999998885 322222222111110 1122344456789999
Q ss_pred ecCCCcEEEEccCC--ceEE----EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC--CCcEEEEEecccC
Q psy14257 419 ESNLDQIEVAKLSG--QFRR----TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG--EHRSVIVRVDLLT 490 (841)
Q Consensus 419 D~~~~~I~v~~~~G--~~~~----~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG--~~~~~i~~~~~~~ 490 (841)
+...+.|.+++++. +... .+....-..|++++++|...+||++... ...|...+++. .....+.......
T Consensus 147 ~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~--~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL--NSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred cCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC--CCEEEEEEecCCCCcEEEEeeccccC
Confidence 97888999998864 3322 1222223579999999998889999866 57888888753 2222221111011
Q ss_pred ---CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC--CCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEE
Q psy14257 491 ---SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD--GKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIR 563 (841)
Q Consensus 491 ---~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d--G~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~ 563 (841)
.....|.++++++.++.||++....+.|..++++ +...+.+..... ...|.++++. +.+||++....+.|..
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred ccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEE
Confidence 1234677899999888999999888999999987 433333322111 1248888884 4579999877777654
Q ss_pred E--eccCCc
Q psy14257 564 A--NKWNGS 570 (841)
Q Consensus 564 ~--~~~~g~ 570 (841)
. +..+|+
T Consensus 304 ~~~d~~~g~ 312 (343)
T 1ri6_A 304 YEIVGEQGL 312 (343)
T ss_dssp EEEETTTTE
T ss_pred EEEcCCCce
Confidence 4 555554
No 67
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.40 E-value=8.4e-11 Score=126.66 Aligned_cols=274 Identities=10% Similarity=0.010 Sum_probs=179.9
Q ss_pred eeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccc
Q psy14257 264 MVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPL 343 (841)
Q Consensus 264 ~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l 343 (841)
.+|+++...+.|...++..+. ....+..+...| ++++++.++.+|+ +.. .+++|.+++++.......
T Consensus 11 ~~~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~-~~~~s~dg~~l~~--~~~-------~~~~i~~~d~~~~~~~~~ 77 (331)
T 3u4y_A 11 FGIVVEQHLRRISFFSTDTLE---ILNQITLGYDFV-DTAITSDCSNVVV--TSD-------FCQTLVQIETQLEPPKVV 77 (331)
T ss_dssp EEEEEEGGGTEEEEEETTTCC---EEEEEECCCCEE-EEEECSSSCEEEE--EES-------TTCEEEEEECSSSSCEEE
T ss_pred EEEEEecCCCeEEEEeCcccc---eeeeEEccCCcc-eEEEcCCCCEEEE--EeC-------CCCeEEEEECCCCceeEE
Confidence 499999999999999887664 233444556667 9999987654444 432 245899999876544122
Q ss_pred cccCcCCCce-EEEEccCCEEEEEeCCCC--eEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEec
Q psy14257 344 VTKNIQWPSS-LVIDYNQDILYWCDSHLN--TVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVES 420 (841)
Q Consensus 344 ~~~~~~~P~g-lavD~~~~~lYwaD~~~~--~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~ 420 (841)
....-..|.. +++++++++||..+...+ .|..++++.......+... ..+ ..++++..++.||+++.
T Consensus 78 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~--------~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 78 AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP--YDA--------VGIAISPNGNGLILIDR 147 (331)
T ss_dssp EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC--TTE--------EEEEECTTSSCEEEEEE
T ss_pred ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC--CCc--------cceEECCCCCEEEEEec
Confidence 2234456788 999999999994443434 8999999766544332211 000 01233444567999998
Q ss_pred CCCc-EEEEccCC--ceE---EEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-EEEEEecccCCCC
Q psy14257 421 NLDQ-IEVAKLSG--QFR---RTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-SVIVRVDLLTSRG 493 (841)
Q Consensus 421 ~~~~-I~v~~~~G--~~~---~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-~~i~~~~~~~~~~ 493 (841)
..+. |.+++++. ... ...+. .-..|.+++++|...+||++... .+.|...+++.... +.+... ..-
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~d~~~~~~~~~~~~~----~~~ 220 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFIS-GGTRPFNITFTPDGNFAFVANLI--GNSIGILETQNPENITLLNAV----GTN 220 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEEC-SSSSEEEEEECTTSSEEEEEETT--TTEEEEEECSSTTSCEEEEEE----ECS
T ss_pred CCCceEEEEEECCCCcEeecCCcccc-CCCCccceEECCCCCEEEEEeCC--CCeEEEEECCCCcccceeeec----cCC
Confidence 8788 88877763 221 12222 23579999999998889999977 67899988864333 212221 123
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCC---CCcc----eEEEE--ecCeEEEEeCCCCeEEEE
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDS---LTHP----FAIAL--FENHVYWTDWRTNSVIRA 564 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~---l~~P----~gla~--~~~~lY~td~~~~~i~~~ 564 (841)
..|.++++++.+++||++....+.|..+++.....+.+...... -..| .++++ .+.+||++....+.|..+
T Consensus 221 ~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 300 (331)
T 3u4y_A 221 NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVF 300 (331)
T ss_dssp SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEE
Confidence 67899999998888999998888999999986554332211000 0111 23566 456799999888888777
Q ss_pred ecc
Q psy14257 565 NKW 567 (841)
Q Consensus 565 ~~~ 567 (841)
+..
T Consensus 301 d~~ 303 (331)
T 3u4y_A 301 TIS 303 (331)
T ss_dssp ETT
T ss_pred Eec
Confidence 753
No 68
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.40 E-value=4.1e-11 Score=129.19 Aligned_cols=259 Identities=11% Similarity=0.121 Sum_probs=165.4
Q ss_pred cEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEE---EEeCCCCCccceEEeee---cCceeE
Q psy14257 240 NVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDV---VVQTGLSTAEGLAVDWI---GKNLYM 313 (841)
Q Consensus 240 ~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~---~~~~~l~~p~giavD~~---~~~~y~ 313 (841)
.++.++.++..+.+|.|... +. ||+++...++|++++.+++....... +...+...|.|||++|. .+.+|+
T Consensus 23 ~~~~va~gL~~P~~ia~~pd-G~--llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv 99 (347)
T 3das_A 23 VLRTVATGLNSPWGLAPLPG-GD--LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYA 99 (347)
T ss_dssp EEEEEECCCSSEEEEEECTT-SC--EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEE
T ss_pred eeEEeecCCCCceEEEEcCC-Cc--EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEE
Confidence 56678889999999999875 56 99999878999998765443111110 12345678999999873 567787
Q ss_pred EEeeecCCCCCCCCCCEEEEccCCCc--------cccccc----cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCC
Q psy14257 314 FWAFWSLSPSNSSDGGIEKAGMHGEN--------RSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 381 (841)
Q Consensus 314 ~~td~~~~~~~~~~~~I~~~~~dG~~--------~~~l~~----~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~ 381 (841)
+++.. ..++|.|+..++.. .++|+. ...+.+..|+++++ ++||++-....... .
T Consensus 100 ~yt~~-------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpD-G~Lyvt~Gd~~~~~----~-- 165 (347)
T 3das_A 100 YFTSA-------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPD-KMLYAGTGESGDTG----L-- 165 (347)
T ss_dssp EEECS-------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTT-SCEEEECBCTTCGG----G--
T ss_pred EEecC-------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCC-CCEEEEECCCCCCc----c--
Confidence 77643 23589999887621 222322 24566778999875 47888743211000 0
Q ss_pred ccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCc--------eEEEEecCCCCCceeEEEcC
Q psy14257 382 ERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQ--------FRRTLIAGDMESPRAIALDP 453 (841)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~--------~~~~l~~~~l~~P~giavd~ 453 (841)
+ ..+ +...++|.+++.+|+ .. .+...++.+|.||++||
T Consensus 166 -------------------------~-----qd~---~~~~G~IlRi~~dG~ip~~nPf~~~-~i~a~G~RNp~Gla~dp 211 (347)
T 3das_A 166 -------------------------S-----QDR---KSLGGKILRMTPDGEPAPGNPFPGS-PVYSYGHRNVQGLAWDD 211 (347)
T ss_dssp -------------------------T-----TCT---TCSTTCEEEECTTSSBCTTCSSTTC-CEEEBCCSBCCEEEECT
T ss_pred -------------------------c-----cCC---CCCCCEEEEEeCCCCccCCCCCCCC-eEEeeCCCCcceEEECC
Confidence 0 000 123466777777765 22 24455789999999999
Q ss_pred CCCeEEEEecCCC-CCeEEEecCCCCCc---------------EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCe
Q psy14257 454 RFGLLFWTDWDSK-APRIERCSMSGEHR---------------SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDS 517 (841)
Q Consensus 454 ~~g~Ly~td~~~~-~~~I~r~~ldG~~~---------------~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~ 517 (841)
.|.||++|.+.. .-.|.++.. |.+. .-+... ......|.||++- .+.+|.+.....+
T Consensus 212 -~G~L~~~d~g~~~~deln~i~~-G~nyGwP~~~g~~~~~~~~~P~~~~---~~~~~ap~G~~~~--~g~~~~~~l~~~~ 284 (347)
T 3das_A 212 -KQRLFASEFGQDTWDELNAIKP-GDNYGWPEAEGKGGGSGFHDPVAQW---STDEASPSGIAYA--EGSVWMAGLRGER 284 (347)
T ss_dssp -TCCEEEEECCSSSCEEEEEECT-TCBCCTTTCCSSCCCTTCCCCSEEE---CTTTCCEEEEEEE--TTEEEEEESTTCS
T ss_pred -CCCEEEEecCCCCCceeeEEcC-CCEecCCcccCCCCCccccCCcEec---CCCCCCCcceEEE--cCceeeccccCCE
Confidence 599999997631 124555442 2211 001110 0112478999996 6899999999999
Q ss_pred EEEEEcCCCee----EEEEcCCCCCCcceEEEE-ecCeEEEEeCCC
Q psy14257 518 IHTVTYDGKDH----HVVLSNHDSLTHPFAIAL-FENHVYWTDWRT 558 (841)
Q Consensus 518 I~~~~~dG~~~----~~i~~~~~~l~~P~gla~-~~~~lY~td~~~ 558 (841)
|.++.+++... +.++.. ...+|.+|++ .+|.||+++...
T Consensus 285 l~~v~~~~~~~~~~~e~~l~~--~~gR~~dv~~~pDG~lyv~td~~ 328 (347)
T 3das_A 285 LWRIPLKGTAAAADPQAFLEG--EYGRLRTVAPAGGDKLWLVTSNT 328 (347)
T ss_dssp EEEEEEETTEESSCCEEESTT--TSSCEEEEEEEETTEEEEEECTT
T ss_pred EEEEEecCCceecceEEeecC--CCCCccEEEECCCCcEEEEEcCC
Confidence 99999987532 334432 3568999998 468999996543
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=1.5e-10 Score=124.97 Aligned_cols=263 Identities=14% Similarity=0.149 Sum_probs=162.1
Q ss_pred cEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeec
Q psy14257 240 NVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWS 319 (841)
Q Consensus 240 ~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~ 319 (841)
.+..+......+.++.|+.. ++ |||++...+.|++.+++++. ...+.......|.+|++|+.+ ++|+ +...
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~-g~--l~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~~~i~~~~dg-~l~v--~~~~ 106 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQ-GQ--LFLLDVFEGNIFKINPETKE---IKRPFVSHKANPAAIKIHKDG-RLFV--CYLG 106 (333)
T ss_dssp EEEEEESSCCCEEEEEECTT-SC--EEEEETTTCEEEEECTTTCC---EEEEEECSSSSEEEEEECTTS-CEEE--EECT
T ss_pred eeEEEeccCccccCcEECCC-CC--EEEEECCCCEEEEEeCCCCc---EEEEeeCCCCCcceEEECCCC-cEEE--EeCC
Confidence 33444445555677778753 55 99999999999999887664 233332334579999998653 4444 3322
Q ss_pred CCCCCCCCCCEEEEccCCCccccccc--cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCc
Q psy14257 320 LSPSNSSDGGIEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSR 397 (841)
Q Consensus 320 ~~~~~~~~~~I~~~~~dG~~~~~l~~--~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~ 397 (841)
. ....++|.+++.++.....+.. .....|++|++|++ ++||+++.....
T Consensus 107 ~---~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~------------------------- 157 (333)
T 2dg1_A 107 D---FKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK-GGFYFTDFRGYS------------------------- 157 (333)
T ss_dssp T---SSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT-SCEEEEECCCBT-------------------------
T ss_pred C---CCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC-CCEEEEeccccc-------------------------
Confidence 1 0112579999988776553332 23456888888875 456666542100
Q ss_pred cccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-
Q psy14257 398 VGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS- 476 (841)
Q Consensus 398 ~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld- 476 (841)
....+.|++++.++...+.+. ..+..|.+|+++|.+.+||+++.. ..+|++.+++
T Consensus 158 ---------------------~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~--~~~i~~~d~~~ 213 (333)
T 2dg1_A 158 ---------------------TNPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETT--ANRLHRIALED 213 (333)
T ss_dssp ---------------------TBCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGG--GTEEEEEEECT
T ss_pred ---------------------cCCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCC--CCeEEEEEecC
Confidence 000234444444443222222 234579999999987789999876 5789999984
Q ss_pred -CCCcEEEEEecc-cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC---CCCCcceEEEEec--C
Q psy14257 477 -GEHRSVIVRVDL-LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH---DSLTHPFAIALFE--N 549 (841)
Q Consensus 477 -G~~~~~i~~~~~-~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~---~~l~~P~gla~~~--~ 549 (841)
|.....+..... .......|.+|++|. +++||+++...+.|.+++++|.....+.... +.+..|.++++.. +
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 214 DGVTIQPFGATIPYYFTGHEGPDSCCIDS-DDNLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBT-TCCEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSC
T ss_pred CCcCcccccceEEEecCCCCCCCceEECC-CCCEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCC
Confidence 443332211000 001225799999995 5789999987889999999887766664321 1122688898843 5
Q ss_pred eEEEEeCCC-----CeEEEEe
Q psy14257 550 HVYWTDWRT-----NSVIRAN 565 (841)
Q Consensus 550 ~lY~td~~~-----~~i~~~~ 565 (841)
+||++.... +.|++++
T Consensus 293 ~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 293 QLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp EEEEEEECGGGTCCEEEEEEE
T ss_pred EEEEEeCccCCCCCceEEEEe
Confidence 899887653 3555554
No 70
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.39 E-value=2e-11 Score=133.54 Aligned_cols=208 Identities=16% Similarity=0.195 Sum_probs=140.1
Q ss_pred cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecC--CCccccCCCCCCccccc---cceEEEE
Q psy14257 344 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGS--DSRVGIPNCRPEDNLWI---GKNLYWV 418 (841)
Q Consensus 344 ~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~--~~~~~i~~~~~~avdw~---~~~LY~t 418 (841)
+...+..|.+|++++++ +||+++.. ++|++++ +|. .+.+....+... ....| ++++.. ++.||++
T Consensus 26 va~~l~~P~~ia~~pdG-~l~V~e~~-g~I~~i~-~g~-~~~~~~~~v~~~g~~~p~g------ia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDG-GMLIAERP-GRIRLFR-EGR-LSTYAELSVYHRGESGLLG------LALHPRFPQEPYVYAY 95 (352)
T ss_dssp EECCCSCEEEEEECTTS-CEEEEETT-TEEEEEE-TTE-EEEEEECCCCCSTTCSEEE------EEECTTTTTSCEEEEE
T ss_pred EECCCCCceEEEEcCCC-eEEEEeCC-CeEEEEE-CCC-ccEeecceEeecCCCCcee------EEECCCCCCCCEEEEE
Confidence 34568899999999875 59999987 9999999 664 333433321111 11122 233333 5799999
Q ss_pred ecCC-----CcEEEEccCCc---eEEEEec------CCCCCceeEEEcCCCCeEEEEecCC-----------CCCeEEEe
Q psy14257 419 ESNL-----DQIEVAKLSGQ---FRRTLIA------GDMESPRAIALDPRFGLLFWTDWDS-----------KAPRIERC 473 (841)
Q Consensus 419 D~~~-----~~I~v~~~~G~---~~~~l~~------~~l~~P~giavd~~~g~Ly~td~~~-----------~~~~I~r~ 473 (841)
+... ++|.++++++. ..++++. .....|.+|+++|+ |+||+++... ..++|.|+
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPD-GMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTT-SCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCC-CCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 9754 78999998864 2333332 23567899999985 7999997421 13689999
Q ss_pred cCCCC-------------CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCe--------EEEEEcCCC------
Q psy14257 474 SMSGE-------------HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDS--------IHTVTYDGK------ 526 (841)
Q Consensus 474 ~ldG~-------------~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~--------I~~~~~dG~------ 526 (841)
+.||+ ..+++. ..+..|.||++|+.+++||++|...+. |..+...+.
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a------~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYS------LGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEE------ECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred cCCCCCCCCCcccCCCCCCccEEE------EcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence 99983 334443 368889999999878999999987765 555543220
Q ss_pred --------eeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCC
Q psy14257 527 --------DHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 527 --------~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g 569 (841)
...-+..- .....|.|++++++.+|++++..++|.++....+
T Consensus 249 ~g~~~~~~~~~p~~~~-~~~~ap~G~~~~~G~l~v~~~~~~~v~~v~~~~~ 298 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFW-PQGFPPGNLAFFRGDLYVAGLRGQALLRLVLEGE 298 (352)
T ss_dssp CSCCCCTTSCCCSEEC-TTCCCEEEEEEETTEEEEEETTTTEEEEEEEEEE
T ss_pred cCCCCCCCCcCCeEec-CCCCCCcceEEECCEEEEEECCCCEEEEEEECCC
Confidence 00000100 0123689999999999999999999999976543
No 71
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.38 E-value=4.1e-11 Score=128.26 Aligned_cols=206 Identities=16% Similarity=0.157 Sum_probs=143.3
Q ss_pred cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC
Q psy14257 344 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD 423 (841)
Q Consensus 344 ~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~ 423 (841)
+...+.++.|++++++++.|||+|...++|++++.+|.. +++.... ....+ +++|. .++||+++...+
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~-~~~~~~~----~~~~g------l~~d~-dG~l~v~~~~~~ 107 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTV-DVLLDAT----AFTNG------NAVDA-QQRLVHCEHGRR 107 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCE-EEEEESC----SCEEE------EEECT-TSCEEEEETTTT
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCE-EEEeCCC----Cccce------eeECC-CCCEEEEECCCC
Confidence 345788999999999999999999999999999997653 3322111 11111 12232 277999998888
Q ss_pred cEEEEccCCceEEEEec---CCCCCceeEEEcCCCCeEEEEec--CC-------------CCCeEEEecCCCCCcEEEEE
Q psy14257 424 QIEVAKLSGQFRRTLIA---GDMESPRAIALDPRFGLLFWTDW--DS-------------KAPRIERCSMSGEHRSVIVR 485 (841)
Q Consensus 424 ~I~v~~~~G~~~~~l~~---~~l~~P~giavd~~~g~Ly~td~--~~-------------~~~~I~r~~ldG~~~~~i~~ 485 (841)
+|.+++.+|+....... ..+..|++|++++. |.||+||. +. ....|++++.++...+.+..
T Consensus 108 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~d-G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~ 186 (305)
T 3dr2_A 108 AITRSDADGQAHLLVGRYAGKRLNSPNDLIVARD-GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMAD 186 (305)
T ss_dssp EEEEECTTSCEEEEECEETTEECSCCCCEEECTT-SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEE
T ss_pred EEEEECCCCCEEEEEeccCCCccCCCCCEEECCC-CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEec
Confidence 99999999875433211 12467999999985 88999874 11 13579999985333333323
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCC-----CeEEEEEcCCCe---eEEEEcCCCCCCcceEEEEe-cCeEEEEeC
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKS-----DSIHTVTYDGKD---HHVVLSNHDSLTHPFAIALF-ENHVYWTDW 556 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~-----~~I~~~~~dG~~---~~~i~~~~~~l~~P~gla~~-~~~lY~td~ 556 (841)
+..|+||+++++++.|||++... +.|+++++++.. .+.+... ....|.||++. +++||++.
T Consensus 187 -------~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~--~~~~pdgi~~d~~G~lwv~~- 256 (305)
T 3dr2_A 187 -------LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASV--PDGLPDGFCVDRGGWLWSSS- 256 (305)
T ss_dssp -------ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECC--SSSCCCSEEECTTSCEEECC-
T ss_pred -------CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEEC--CCCCCCeEEECCCCCEEEec-
Confidence 45799999999888999999873 799999988643 2333332 13568999995 58888887
Q ss_pred CCCeEEEEeccCCcceEE
Q psy14257 557 RTNSVIRANKWNGSDVTL 574 (841)
Q Consensus 557 ~~~~i~~~~~~~g~~~~~ 574 (841)
.+.|.++++ .|+....
T Consensus 257 -~~gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 257 -GTGVCVFDS-DGQLLGH 272 (305)
T ss_dssp -SSEEEEECT-TSCEEEE
T ss_pred -CCcEEEECC-CCCEEEE
Confidence 346888887 4554433
No 72
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.37 E-value=1.2e-10 Score=127.01 Aligned_cols=277 Identities=16% Similarity=0.137 Sum_probs=166.9
Q ss_pred CCceeEEEcCCCCeEEEEec--CCCCCeEEEecCCCCCcEEEEEe-cccCCCCCCceeEEEeccCCEEEEEeCC-----C
Q psy14257 444 ESPRAIALDPRFGLLFWTDW--DSKAPRIERCSMSGEHRSVIVRV-DLLTSRGAWPNGLTLDYQLTRIYWIDAK-----S 515 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~--~~~~~~I~r~~ldG~~~~~i~~~-~~~~~~~~~P~glalD~~~~~LYw~d~~-----~ 515 (841)
..|.+|++++. |.+|++.. .....+|..++ +|.. ..+... ......+..|.||++|+ .++|||+|.. .
T Consensus 17 ~~p~~va~~~~-g~~~v~~~~~~~~~~~l~~~~-~g~~-~~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPD-GRLFLSLHQFYQPEMQVAELT-QDGL-IPFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTT-SCEEEEECGGGCCSCSEEEEE-TTEE-EESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSC
T ss_pred CCcceEEECCC-CCEEEEeCCCCCCceEEEEEC-CCCe-ecCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCC
Confidence 68999999985 88999963 21124888887 5531 111000 00113578999999996 4899999986 5
Q ss_pred CeEEEEEcCCCe-eEEEEcCC---CCCCcceEEEEe--cCeEEEEeC---CCCeEEEEeccCCcceEEEecccCCCceec
Q psy14257 516 DSIHTVTYDGKD-HHVVLSNH---DSLTHPFAIALF--ENHVYWTDW---RTNSVIRANKWNGSDVTLIQRTLTQPFIYV 586 (841)
Q Consensus 516 ~~I~~~~~dG~~-~~~i~~~~---~~l~~P~gla~~--~~~lY~td~---~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h 586 (841)
.+|.+++++... .+++.... .....|.+|++. ++++|++|. ..+.|+.++..+|+...++.....
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~------ 166 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG------ 166 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT------
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc------
Confidence 799999997544 44443211 112357899997 579999998 788999898776664433211000
Q ss_pred cCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecC
Q psy14257 587 NGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIP 666 (841)
Q Consensus 587 ~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~ 666 (841)
. . |++..+..++.. |........+. . .
T Consensus 167 ~---------~---------------------~~~~~~~~~g~~-------~~~~~~~g~~~-------------~--~- 193 (343)
T 2qe8_A 167 I---------A---------------------PEDIDLVIDGVP-------VQIGQPDGTVI-------------R--P- 193 (343)
T ss_dssp T---------S---------------------CCSCCCEETTEE-------CBEECTTSCEE-------------C--C-
T ss_pred c---------c---------------------ccccceeECCEE-------EEeccCCCcee-------------c--e-
Confidence 0 0 000000111110 00000001110 0 0
Q ss_pred CCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEe
Q psy14257 667 QVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAID 746 (841)
Q Consensus 667 ~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD 746 (841)
...+.+|++++..+.||+++...++|++++.+.-... .++... +. ...... .....|.|||+|
T Consensus 194 -~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~------------~~~~~~-~~-~~~~~~--g~~g~pdgia~d 256 (343)
T 2qe8_A 194 -HLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNL------------QLTDAE-LG-SKIERY--SEKPICDGISID 256 (343)
T ss_dssp -CCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCT------------TCCHHH-HH-TTCEEE--EECCSCSCEEEC
T ss_pred -ecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCC------------CCChhh-hh-cceEec--ccCCCCceEEEC
Confidence 0235689999999999999988889999975421000 000000 00 000111 123479999999
Q ss_pred ecCCcEEEEecCCCCCeEEEEec-CCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCC
Q psy14257 747 WIAQNMFIAVSSPTQSKIVVCNL-EGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTK 810 (841)
Q Consensus 747 ~~~~~LYw~~~~~~~~~I~v~~l-~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~ 810 (841)
.. ++||+++ ...++|.+++. +|+... ++.. + .+..|.+|++++. |.||+++...
T Consensus 257 ~~-G~l~va~--~~~~~V~~~d~~~G~~~~-~~~~----~-~~~~p~~va~~~~-g~l~v~~~~~ 311 (343)
T 2qe8_A 257 KD-HNIYVGD--LAHSAIGVITSADRAYKL-LVTD----E-KLSWTDSFNFGSD-GYLYFDCNQL 311 (343)
T ss_dssp TT-CCEEEEE--GGGTEEEEEETTTTEEEE-EEEC----G-GGSCEEEEEECTT-SCEEEEECCG
T ss_pred CC-CCEEEEc--cCCCeEEEEECCCCCEEE-EEEC----C-ceecCCeeEECCC-CcEEEEeCcc
Confidence 86 6899994 57899999999 887543 4432 0 2789999999985 8999998754
No 73
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.37 E-value=3.2e-09 Score=114.15 Aligned_cols=291 Identities=10% Similarity=0.023 Sum_probs=190.4
Q ss_pred cceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-EEEEEecccC
Q psy14257 412 GKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-SVIVRVDLLT 490 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-~~i~~~~~~~ 490 (841)
.+.+|+++...+.|.+++++.......+..+...| +++++|.+.+||++..+ ..+|+..+++.... .....
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~--~~~i~~~d~~~~~~~~~~~~----- 80 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDF--CQTLVQIETQLEPPKVVAIQ----- 80 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEEST--TCEEEEEECSSSSCEEEEEE-----
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCC--CCeEEEEECCCCceeEEecc-----
Confidence 48899999999999999987544433334455667 99999998889999986 67999999976554 33333
Q ss_pred CCCCCcee-EEEeccCCEEEEEeCCCC--eEEEEEcCCCeeEEEEcCCCCCCcceEEEEec--CeEEEEeCCCCe-EEEE
Q psy14257 491 SRGAWPNG-LTLDYQLTRIYWIDAKSD--SIHTVTYDGKDHHVVLSNHDSLTHPFAIALFE--NHVYWTDWRTNS-VIRA 564 (841)
Q Consensus 491 ~~~~~P~g-lalD~~~~~LYw~d~~~~--~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~--~~lY~td~~~~~-i~~~ 564 (841)
....|.. +++++.+++||......+ .|..++++.......+.. -..|.++++.. .+||+++...+. |...
T Consensus 81 -~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~~~~~~~~~i~~~ 156 (331)
T 3u4y_A 81 -EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI---PYDAVGIAISPNGNGLILIDRSSANTVRRF 156 (331)
T ss_dssp -ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC---CTTEEEEEECTTSSCEEEEEETTTTEEEEE
T ss_pred -cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC---CCCccceEECCCCCEEEEEecCCCceEEEE
Confidence 2356787 999998889994444334 899999986655444433 24688899853 369998876554 4433
Q ss_pred eccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecC
Q psy14257 565 NKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRP 644 (841)
Q Consensus 565 ~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~ 644 (841)
+.... +. +....
T Consensus 157 ~~~~~----------------------------------------------------------g~---------~~~~~- 168 (331)
T 3u4y_A 157 KIDAD----------------------------------------------------------GV---------LFDTG- 168 (331)
T ss_dssp EECTT----------------------------------------------------------CC---------EEEEE-
T ss_pred EECCC----------------------------------------------------------Cc---------EeecC-
Confidence 32100 00 00000
Q ss_pred CeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccc
Q psy14257 645 REIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSI 724 (841)
Q Consensus 645 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 724 (841)
...+ .....+..++|+|..+.+|+++...+.|..+++.......
T Consensus 169 --~~~~---------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~------------------- 212 (331)
T 3u4y_A 169 --QEFI---------------SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENIT------------------- 212 (331)
T ss_dssp --EEEE---------------CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCE-------------------
T ss_pred --Cccc---------------cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccc-------------------
Confidence 0000 0112357889999999999999888999999887544100
Q ss_pred cCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEE---EcCCCCCCCcCCCceEEEEeCCCC
Q psy14257 725 VGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTI---LSNESNDTSTLSKISSIAVWPVKG 801 (841)
Q Consensus 725 ~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~---~~~~~~~~~~l~~p~~iavd~~~g 801 (841)
....+. .-..|.+|++++.++.||++ ....+.|.++++.....+.+ ......+........+|++.|...
T Consensus 213 ----~~~~~~-~~~~~~~~~~spdg~~l~v~--~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 285 (331)
T 3u4y_A 213 ----LLNAVG-TNNLPGTIVVSRDGSTVYVL--TESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTET 285 (331)
T ss_dssp ----EEEEEE-CSSCCCCEEECTTSSEEEEE--CSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSS
T ss_pred ----eeeecc-CCCCCceEEECCCCCEEEEE--EcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCC
Confidence 011222 23679999999999999999 45677899999875433222 111000111122335689999999
Q ss_pred eEEEEecCCCcceEEEEecCCCceEE
Q psy14257 802 KMFWSNVTKQVVTIEMAFMDGTKRET 827 (841)
Q Consensus 802 ~lyw~d~~~~~~~I~~~~~dG~~~~~ 827 (841)
+||.+....+ +|...++++.....
T Consensus 286 ~l~v~~~~~~--~v~v~d~~~~~~~~ 309 (331)
T 3u4y_A 286 KLFISANISR--ELKVFTISGKVVGY 309 (331)
T ss_dssp EEEEEETTTT--EEEEEETTSCEEEE
T ss_pred EEEEecCCCC--cEEEEEecCCcccc
Confidence 9999987663 68888887755433
No 74
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.35 E-value=2.8e-10 Score=123.63 Aligned_cols=267 Identities=15% Similarity=0.117 Sum_probs=164.2
Q ss_pred cccccccccEEE--EeccccceeeecccccCCcceeEEEecC--CCeEEEEEecCCcccceEEEEeCCCCCccceEEeee
Q psy14257 232 RGVDLRTFNVIA--LISSLKNTIALDFYYTPTANMVFWTDVI--DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWI 307 (841)
Q Consensus 232 ~~~~~~~~~~~~--l~~~~~~~~avd~~~~~~~~~lyw~d~~--~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~ 307 (841)
+.++........ .......+.++.|... ++ ||+++.. .+.|++.+++++....... +......|.++++++.
T Consensus 21 ~~~d~~tg~~~~~~~~~~~~~p~~~a~spd-g~--l~~~~~~~~~~~v~~~~~~~g~~~~~~~-~~~~~~~p~~~a~spd 96 (347)
T 3hfq_A 21 GTLDTTAKTLTNDGLLAATQNPTYLALSAK-DC--LYSVDKEDDEGGIAAWQIDGQTAHKLNT-VVAPGTPPAYVAVDEA 96 (347)
T ss_dssp EEEETTTTEEEEEEEEEECSCCCCEEECTT-CE--EEEEEEETTEEEEEEEEEETTEEEEEEE-EEEESCCCSEEEEETT
T ss_pred EEEcCCCCeEEEeeeeeccCCcceEEEccC-Ce--EEEEEecCCCceEEEEEecCCcEEEeee-eecCCCCCEEEEECCC
Confidence 344444443333 2333456777777764 45 9998764 6789988887665322222 2223568999999987
Q ss_pred cCceeEEEeeecCCCCCCCCCCEEEEccC--CCcccccccc-----------CcCCCceEEEEccCCEEEEEeCCCCeEE
Q psy14257 308 GKNLYMFWAFWSLSPSNSSDGGIEKAGMH--GENRSPLVTK-----------NIQWPSSLVIDYNQDILYWCDSHLNTVE 374 (841)
Q Consensus 308 ~~~~y~~~td~~~~~~~~~~~~I~~~~~d--G~~~~~l~~~-----------~~~~P~glavD~~~~~lYwaD~~~~~I~ 374 (841)
++.+|+ +.+ .++.|..++++ |+. ..+... ....|.+++++++++ ||+++...+.|.
T Consensus 97 g~~l~~--~~~-------~~~~v~v~~~~~~g~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~ 165 (347)
T 3hfq_A 97 RQLVYS--ANY-------HKGTAEVMKIAADGAL-TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY 165 (347)
T ss_dssp TTEEEE--EET-------TTTEEEEEEECTTSCE-EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred CCEEEE--EeC-------CCCEEEEEEeCCCCCe-eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence 755554 332 23466666653 332 221111 123577899999888 999999999999
Q ss_pred EEEec-CCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCC---ceEE--EEecCC-----C
Q psy14257 375 SVRVD-GSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSG---QFRR--TLIAGD-----M 443 (841)
Q Consensus 375 ~~~ld-G~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G---~~~~--~l~~~~-----l 443 (841)
.++++ ......+..........+. .++++..++.||+++...+.|.+++++. +... .+.... .
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~------~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~ 239 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPR------HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAH 239 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEE------EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSC
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCc------eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCC
Confidence 99998 3333322211110000000 1234445567999999889999988873 3221 111111 1
Q ss_pred CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC-CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE-HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~-~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
..|.+|+++|+..+||+++.. .+.|...+++.. ..+.+... ......|.++++++++++||+++...+.|..++
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~--~~~v~v~~~~~~g~~~~~~~~---~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 314 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRG--YNTLAVFAVTADGHLTLIQQI---STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYA 314 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEET--TTEEEEEEECGGGCEEEEEEE---ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CcceeEEECCCCCEEEEEeCC--CCEEEEEEECCCCcEEEeEEE---ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEE
Confidence 458999999998899999976 567777776522 22222221 023457999999998889999998888888875
Q ss_pred cC
Q psy14257 523 YD 524 (841)
Q Consensus 523 ~d 524 (841)
++
T Consensus 315 ~d 316 (347)
T 3hfq_A 315 RD 316 (347)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 75
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.33 E-value=1.4e-08 Score=111.90 Aligned_cols=275 Identities=14% Similarity=0.161 Sum_probs=187.4
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
+.||++....+.|.+.+++.......+... ..|.+++++|...+||++... .+.|...++........+. .
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~------~ 72 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAH--SNDVSIIDTATNNVIATVP------A 72 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEE------C
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCC--CCeEEEEECCCCeEEEEEE------C
Confidence 678999988899999998754443333322 569999999998899999865 5788888885443333333 2
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCc
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
-..|.++++++.+++||++....+.|..+++............ ..|.++++. +.+||++....+.|..++..+++
T Consensus 73 ~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 149 (391)
T 1l0q_A 73 GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG---KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKA 149 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC---CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 2378999999989999999988899999999876554444332 356788874 34677887666666555533221
Q ss_pred ceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEE
Q psy14257 571 DVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGV 650 (841)
Q Consensus 571 ~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~ 650 (841)
.... +
T Consensus 150 ~~~~---------------------------------------------------------------------------~ 154 (391)
T 1l0q_A 150 VINT---------------------------------------------------------------------------V 154 (391)
T ss_dssp EEEE---------------------------------------------------------------------------E
T ss_pred EEEE---------------------------------------------------------------------------E
Confidence 1110 0
Q ss_pred ecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEE
Q psy14257 651 DLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQ 730 (841)
Q Consensus 651 ~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (841)
.. -..+..++|++.++.||++....++|+..++.... ..
T Consensus 155 ~~---------------~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~--------------------------~~ 193 (391)
T 1l0q_A 155 SV---------------GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS--------------------------VI 193 (391)
T ss_dssp EC---------------CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE--------------------------EE
T ss_pred ec---------------CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe--------------------------EE
Confidence 00 01234566777777888877777788888776544 12
Q ss_pred EEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCC
Q psy14257 731 LVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTK 810 (841)
Q Consensus 731 ~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~ 810 (841)
..+. ....|.++++++.++.||.+..+...+.|.++++........+.. -..|.+++++|...+||.+....
T Consensus 194 ~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-------~~~~~~~~~s~dg~~l~~s~~~d 265 (391)
T 1l0q_A 194 DTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPV-------GPDPAGIAVTPDGKKVYVALSFX 265 (391)
T ss_dssp EEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEEC-------CSSEEEEEECTTSSEEEEEETTT
T ss_pred EEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEec-------CCCccEEEEccCCCEEEEEcCCC
Confidence 2222 234688999999999999995322578999999976544334433 24789999999988999987655
Q ss_pred CcceEEEEecCCCce
Q psy14257 811 QVVTIEMAFMDGTKR 825 (841)
Q Consensus 811 ~~~~I~~~~~dG~~~ 825 (841)
++|...++.....
T Consensus 266 --~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 266 --NTVSVIDTATNTI 278 (391)
T ss_dssp --TEEEEEETTTTEE
T ss_pred --CEEEEEECCCCcE
Confidence 3688777764433
No 76
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.31 E-value=4.9e-09 Score=113.08 Aligned_cols=260 Identities=16% Similarity=0.170 Sum_probs=168.2
Q ss_pred CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCC----C
Q psy14257 441 GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKS----D 516 (841)
Q Consensus 441 ~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~----~ 516 (841)
.....|.++++++. |.|||++.. .+.|++.++++...+.+.. .....|.+|++|+ +++||++.... +
T Consensus 42 ~~~~~~~~~~~~~~-g~l~~~~~~--~~~i~~~d~~~~~~~~~~~-----~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~ 112 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQ-GQLFLLDVF--EGNIFKINPETKEIKRPFV-----SHKANPAAIKIHK-DGRLFVCYLGDFKSTG 112 (333)
T ss_dssp SSCCCEEEEEECTT-SCEEEEETT--TCEEEEECTTTCCEEEEEE-----CSSSSEEEEEECT-TSCEEEEECTTSSSCC
T ss_pred ccCccccCcEECCC-CCEEEEECC--CCEEEEEeCCCCcEEEEee-----CCCCCcceEEECC-CCcEEEEeCCCCCCCc
Confidence 45678999999975 779999876 6799999998766555543 2346799999995 57899998765 6
Q ss_pred eEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCC------CeEEEEeccCCcceEEEecccCCCceeccCC
Q psy14257 517 SIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRT------NSVIRANKWNGSDVTLIQRTLTQPFIYVNGV 589 (841)
Q Consensus 517 ~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~------~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp 589 (841)
.|.++++++.....+.........|.+|++. ++.+|+++... +.|++++
T Consensus 113 ~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~------------------------ 168 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVS------------------------ 168 (333)
T ss_dssp EEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEEC------------------------
T ss_pred eEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEe------------------------
Confidence 8999999988766454322223468888885 57888887532 1111111
Q ss_pred cccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCccccceeecCCCC
Q psy14257 590 VKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVF 669 (841)
Q Consensus 590 ~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 669 (841)
+++ ..+..+. ....
T Consensus 169 ------------------------------------~~~----------------~~~~~~~--------------~~~~ 182 (333)
T 2dg1_A 169 ------------------------------------PDF----------------RTVTPII--------------QNIS 182 (333)
T ss_dssp ------------------------------------TTS----------------CCEEEEE--------------EEES
T ss_pred ------------------------------------CCC----------------CEEEEee--------------cCCC
Confidence 000 0000000 0112
Q ss_pred CceEEEEecCCCEEEEEECCCCeEEEEEcc--cCceeeeeeeeeeeecccccccccccCceEEEEee-CCCCCcceeEEe
Q psy14257 670 SPNNLNFDAANKKIYWTDQEYNEVKRSSIV--GGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVD-AGISHPSGLAID 746 (841)
Q Consensus 670 ~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~glAvD 746 (841)
.+.++++++..+.||+++...+.|++++++ |...+.+. ...+.. .+...|.+|++|
T Consensus 183 ~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~---------------------~~~~~~~~~~~~~~~i~~d 241 (333)
T 2dg1_A 183 VANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFG---------------------ATIPYYFTGHEGPDSCCID 241 (333)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEE---------------------EEEEEECCSSSEEEEEEEB
T ss_pred cccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCccccc---------------------ceEEEecCCCCCCCceEEC
Confidence 456789999888999999888999999884 33211100 011111 122478999999
Q ss_pred ecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCC---cceEEEEecCCC
Q psy14257 747 WIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ---VVTIEMAFMDGT 823 (841)
Q Consensus 747 ~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~---~~~I~~~~~dG~ 823 (841)
..+ +||++. ...++|.+++++|+....+.... ...+.+..|.+++++|..+.||++..... .+.|.+..++..
T Consensus 242 ~~G-~l~v~~--~~~~~v~~~d~~g~~~~~~~~~~-~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 242 SDD-NLYVAM--YGQGRVLVFNKRGYPIGQILIPG-RDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp TTC-CEEEEE--ETTTEEEEECTTSCEEEEEECTT-GGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSC
T ss_pred CCC-CEEEEE--cCCCEEEEECCCCCEEEEEEcCC-CccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccC
Confidence 875 688883 35688999999887655543220 00001237999999988779999887531 246888877654
Q ss_pred c
Q psy14257 824 K 824 (841)
Q Consensus 824 ~ 824 (841)
.
T Consensus 318 g 318 (333)
T 2dg1_A 318 G 318 (333)
T ss_dssp B
T ss_pred c
Confidence 3
No 77
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=1.8e-09 Score=119.15 Aligned_cols=277 Identities=14% Similarity=0.135 Sum_probs=190.7
Q ss_pred eeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccc
Q psy14257 264 MVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPL 343 (841)
Q Consensus 264 ~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l 343 (841)
.||++....+.|...++..+. ....+. .-..|.++++.+.++.+|+ +. ..++.|..+++........
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~---~~~~~~-~~~~~~~~~~s~dg~~l~~--~~-------~~d~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNK---VTATIP-VGSNPMGAVISPDGTKVYV--AN-------AHSNDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTE---EEEEEE-CSSSEEEEEECTTSSEEEE--EE-------GGGTEEEEEETTTTEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCe---EEEEee-cCCCcceEEECCCCCEEEE--EC-------CCCCeEEEEECCCCeEEEE
Confidence 378888888888888876653 222233 2346888898876644444 32 2346888888754333222
Q ss_pred cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC
Q psy14257 344 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD 423 (841)
Q Consensus 344 ~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~ 423 (841)
... -..|.++++++++++||++....+.|+.+++........+... .... .+++...++.||++....+
T Consensus 70 ~~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~----~~~~------~~~~s~dg~~l~~~~~~~~ 138 (391)
T 1l0q_A 70 VPA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG----KSPL------GLALSPDGKKLYVTNNGDK 138 (391)
T ss_dssp EEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS----SSEE------EEEECTTSSEEEEEETTTT
T ss_pred EEC-CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC----CCcc------eEEECCCCCEEEEEeCCCC
Confidence 222 2388999999999999999999999999999876544333211 0000 0122333467989998889
Q ss_pred cEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEec
Q psy14257 424 QIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDY 503 (841)
Q Consensus 424 ~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~ 503 (841)
.|.+.++........+.. -..|.+++++|...+||++... .+.|...++........+. .-..|.++++++
T Consensus 139 ~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~--~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~~~ 209 (391)
T 1l0q_A 139 TVSVINTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFD--SMSISVIDTVTNSVIDTVK------VEAAPSGIAVNP 209 (391)
T ss_dssp EEEEEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEE------CSSEEEEEEECT
T ss_pred EEEEEECCCCcEEEEEec-CCCcceEEECCCCCEEEEEeCC--CCEEEEEECCCCeEEEEEe------cCCCccceEECC
Confidence 999999875544333332 2578999999998899998766 6789999887554443333 234689999999
Q ss_pred cCCEEEEEeC--CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceEEEe
Q psy14257 504 QLTRIYWIDA--KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 504 ~~~~LYw~d~--~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~~i~ 576 (841)
.+.+||++.. ..+.|..+++........+... ..|.++++. +.+||++....+.|..++..+++....+.
T Consensus 210 ~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 210 EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG---PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC---SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC---CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 8889999886 6789999999865544444332 357888885 45799998888999999987776555543
No 78
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.30 E-value=2e-09 Score=117.59 Aligned_cols=309 Identities=9% Similarity=0.089 Sum_probs=178.6
Q ss_pred CceeEEEcCCCCeEEEEecCC-CCCeEEEecCCCC--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC---CCCeE
Q psy14257 445 SPRAIALDPRFGLLFWTDWDS-KAPRIERCSMSGE--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA---KSDSI 518 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~-~~~~I~r~~ldG~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~---~~~~I 518 (841)
+|..++..+..-++|+..+.. ....|+...+|.. ..+.+.. .....|.+|++++.+++||.+.. ..+.|
T Consensus 3 ~p~~~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~-----~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v 77 (361)
T 3scy_A 3 QPTDPSTTDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSD-----AEVANPSYLIPSADGKFVYSVNEFSKDQAAV 77 (361)
T ss_dssp ---CCCGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEE-----EECSCCCSEEECTTSSEEEEEECCSSTTCEE
T ss_pred CCCChhhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeec-----ccCCCCceEEECCCCCEEEEEEccCCCCCcE
Confidence 466666666666788886542 2346666666532 3333332 14578999999998889999987 34677
Q ss_pred EEEEcCC--CeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCC
Q psy14257 519 HTVTYDG--KDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCE 596 (841)
Q Consensus 519 ~~~~~dG--~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~ 596 (841)
..++++. ...+.+.........|..+++.+.+||+++...+.|..++.........+.... . ....+.+|-.
T Consensus 78 ~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~-----~-~~g~~~~~~~ 151 (361)
T 3scy_A 78 SAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVI-----E-FKGSGPDKER 151 (361)
T ss_dssp EEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEE-----E-CCCCCSCTTT
T ss_pred EEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeE-----E-ccCCCCCccc
Confidence 6665554 333333322112357899999667899999888888777654332211100000 0 0000111100
Q ss_pred CCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec--CCeEEEEecCCCCc----c-c-----cceee
Q psy14257 597 MNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR--PREIRGVDLEHPYY----H-T-----IPTIS 664 (841)
Q Consensus 597 ~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~--~~~i~~~~l~~~~~----~-~-----~~~~~ 664 (841)
... .| +.+..+.+| ..+|+++. .+.|+.+.++.... . . .....
T Consensus 152 ~~~---~~--------------~~~~~~spd--------g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 152 QTM---PH--------------LHCVRITPD--------GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp CSS---CC--------------EEEEEECTT--------SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred cCC---Cc--------------ceEEEECCC--------CCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 000 00 011112222 22344443 34566666654331 1 0 01223
Q ss_pred cCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeE
Q psy14257 665 IPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLA 744 (841)
Q Consensus 665 ~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glA 744 (841)
......|..++|+|..+.+|+++...++|..++++....+.+. ...........|.+|+
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~---------------------~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQ---------------------TVAADTVNAQGSGDIH 265 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEE---------------------EEESCSSCCCCEEEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeE---------------------EEecCCCCCCCcccEE
Confidence 3334568899999999999999988899999988754411110 0001112345678999
Q ss_pred EeecCCcEEEEecCCC-CCeEEEEecC---CcceEEEEc--CCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEE
Q psy14257 745 IDWIAQNMFIAVSSPT-QSKIVVCNLE---GEYQTTILS--NESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMA 818 (841)
Q Consensus 745 vD~~~~~LYw~~~~~~-~~~I~v~~l~---g~~~~~~~~--~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~ 818 (841)
+++.++.||.++ .. .++|.+++++ |+.. .+.. . -..|++|+++|...+||.+....+ +|...
T Consensus 266 ~spdg~~l~v~~--~~~~~~i~v~~~~~~~g~~~-~~~~~~~-------g~~~~~~~~spdg~~l~~~~~~~~--~v~v~ 333 (361)
T 3scy_A 266 LSPDGKYLYASN--RLKADGVAIFKVDETNGTLT-KVGYQLT-------GIHPRNFIITPNGKYLLVACRDTN--VIQIF 333 (361)
T ss_dssp ECTTSSEEEEEE--CSSSCEEEEEEECTTTCCEE-EEEEEEC-------SSCCCEEEECTTSCEEEEEETTTT--EEEEE
T ss_pred ECCCCCEEEEEC--CCCCCEEEEEEEcCCCCcEE-EeeEecC-------CCCCceEEECCCCCEEEEEECCCC--CEEEE
Confidence 999999999994 45 6889999986 3322 2221 1 258999999999889999987654 56665
Q ss_pred ecCC
Q psy14257 819 FMDG 822 (841)
Q Consensus 819 ~~dG 822 (841)
.+|-
T Consensus 334 ~~d~ 337 (361)
T 3scy_A 334 ERDQ 337 (361)
T ss_dssp EECT
T ss_pred EEEC
Confidence 5553
No 79
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=7.2e-10 Score=119.86 Aligned_cols=240 Identities=13% Similarity=0.097 Sum_probs=149.9
Q ss_pred EEEEecc-ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeec
Q psy14257 241 VIALISS-LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWS 319 (841)
Q Consensus 241 ~~~l~~~-~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~ 319 (841)
++.+... ...+.+..|+.+.+. |||+|...++|++.+++++. ... +.. -..|.++++++.+ ++|+. +
T Consensus 40 ~~~~~~~~~~~~egp~~~~~~~~--l~~~d~~~~~i~~~d~~~~~---~~~-~~~-~~~v~~i~~~~dg-~l~v~-~--- 107 (326)
T 2ghs_A 40 GRVLDETPMLLGEGPTFDPASGT--AWWFNILERELHELHLASGR---KTV-HAL-PFMGSALAKISDS-KQLIA-S--- 107 (326)
T ss_dssp CEEEECSCCSBEEEEEEETTTTE--EEEEEGGGTEEEEEETTTTE---EEE-EEC-SSCEEEEEEEETT-EEEEE-E---
T ss_pred eEEeeccCCCCCcCCeEeCCCCE--EEEEECCCCEEEEEECCCCc---EEE-EEC-CCcceEEEEeCCC-eEEEE-E---
Confidence 3444442 334567788876666 99999999999999887653 222 222 2468889888653 44442 1
Q ss_pred CCCCCCCCCCEEEEccCCCcccccccc----CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCC
Q psy14257 320 LSPSNSSDGGIEKAGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSD 395 (841)
Q Consensus 320 ~~~~~~~~~~I~~~~~dG~~~~~l~~~----~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~ 395 (841)
...|.+++.++...+.+... ....|+++++|+++ +||+++.....
T Consensus 108 -------~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~----------------------- 156 (326)
T 2ghs_A 108 -------DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKA----------------------- 156 (326)
T ss_dssp -------TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTC-----------------------
T ss_pred -------CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcC-----------------------
Confidence 12577777754444433221 12456777777653 35554421000
Q ss_pred CccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecC
Q psy14257 396 SRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSM 475 (841)
Q Consensus 396 ~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~l 475 (841)
+...+.|++++ +|+... +. ..+..|++|++++....||+++.. ..+|+++++
T Consensus 157 -----------------------~~~~~~l~~~~-~g~~~~-~~-~~~~~~~~i~~s~dg~~lyv~~~~--~~~I~~~d~ 208 (326)
T 2ghs_A 157 -----------------------ETGAGSIYHVA-KGKVTK-LF-ADISIPNSICFSPDGTTGYFVDTK--VNRLMRVPL 208 (326)
T ss_dssp -----------------------CTTCEEEEEEE-TTEEEE-EE-EEESSEEEEEECTTSCEEEEEETT--TCEEEEEEB
T ss_pred -----------------------CCCceEEEEEe-CCcEEE-ee-CCCcccCCeEEcCCCCEEEEEECC--CCEEEEEEc
Confidence 00123344444 333222 11 234579999999987799999976 679999998
Q ss_pred C---C-C--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-c
Q psy14257 476 S---G-E--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-E 548 (841)
Q Consensus 476 d---G-~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~ 548 (841)
+ | . .++.+... ......|.|+++|. +++||++....+.|.+++++|.....+... ...|.++++. .
T Consensus 209 ~~~~Gl~~~~~~~~~~~---~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~~g~~~~~i~~~---~~~~~~~af~g~ 281 (326)
T 2ghs_A 209 DARTGLPTGKAEVFIDS---TGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDTDGNHIARYEVP---GKQTTCPAFIGP 281 (326)
T ss_dssp CTTTCCBSSCCEEEEEC---TTSSSEEEEEEECT-TSCEEEEEETTTEEEEECTTCCEEEEEECS---CSBEEEEEEEST
T ss_pred ccccCCcccCceEEEEC---CCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECCCCCEEEEEECC---CCCcEEEEEecC
Confidence 5 4 2 23444331 01345799999995 578999988778999999988766655432 2468889886 2
Q ss_pred --CeEEEEeCCC
Q psy14257 549 --NHVYWTDWRT 558 (841)
Q Consensus 549 --~~lY~td~~~ 558 (841)
+.||++....
T Consensus 282 d~~~L~vt~~~~ 293 (326)
T 2ghs_A 282 DASRLLVTSARE 293 (326)
T ss_dssp TSCEEEEEEBCT
T ss_pred CCCEEEEEecCC
Confidence 5799987654
No 80
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.29 E-value=2.6e-09 Score=116.78 Aligned_cols=265 Identities=12% Similarity=0.015 Sum_probs=162.9
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC--Cccccccc--cCcCCCceEEEEccCCEEEEEeCCC
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG--ENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHL 370 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG--~~~~~l~~--~~~~~P~glavD~~~~~lYwaD~~~ 370 (841)
....|..+++++.++.+|+. ... +...+.|..+.++. ...+.+.. ..-..|..+++ .+++||+++...
T Consensus 48 ~~~~p~~l~~spdg~~l~~~--~~~----~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSV--NEF----SKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEE--ECC----SSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT
T ss_pred cCCCCceEEECCCCCEEEEE--Ecc----CCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC
Confidence 45689999999877555553 221 01235676655543 23333322 23457889998 688999999999
Q ss_pred CeEEEEEecCCcc-EEEEeeeeecCCCcc----ccCCCCCCccccccceEEEEecCCCcEEEEccCCce--------E--
Q psy14257 371 NTVESVRVDGSER-TVSFNLEVLGSDSRV----GIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQF--------R-- 435 (841)
Q Consensus 371 ~~I~~~~ldG~~~-~~~~~~~~~~~~~~~----~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~--------~-- 435 (841)
+.|..++++.... ..+............ ..+....++++..++.||+++...+.|.+++++... .
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~ 199 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK 199 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec
Confidence 9999999864321 111100000000000 000001134555567799999988999998776322 1
Q ss_pred ---EEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEe
Q psy14257 436 ---RTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWID 512 (841)
Q Consensus 436 ---~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d 512 (841)
..+.......|++++++|...+||+++.. .+.|...+++....+.+............|.++++++++++||+++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~--~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 200 GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI--GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp EEEEEEECCTTCCEEEEEECTTSSEEEEEETT--TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred ccccceecCCCCCCeEEEEcCCCCEEEEEcCC--CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 12222334679999999998899999966 5678888876433333332211223456688999999999999999
Q ss_pred CC-CCeEEEEEcC--CCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEE--EeccCCc
Q psy14257 513 AK-SDSIHTVTYD--GKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIR--ANKWNGS 570 (841)
Q Consensus 513 ~~-~~~I~~~~~d--G~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~--~~~~~g~ 570 (841)
.. .+.|..++++ ....+.+..... -..|.++++. +.+||+++...+.|.. ++..+|+
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 87 7888888875 222222221111 2468899984 4579999977777655 5655554
No 81
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.27 E-value=4.2e-08 Score=109.69 Aligned_cols=285 Identities=13% Similarity=0.141 Sum_probs=182.7
Q ss_pred ccccccceEEEEecCCCcEEEEccCCceEEEEec-----CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcE
Q psy14257 407 DNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA-----GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRS 481 (841)
Q Consensus 407 avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~-----~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~ 481 (841)
++++ ++.+|++....+.|.+.+++......... .......++++++ +|.+|++... .+.|...+++.....
T Consensus 129 ~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~--d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 129 RFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQ--ANAVHVFDLKTLAYK 204 (433)
T ss_dssp EESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGG--GTEEEEEETTTCCEE
T ss_pred EEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECC--CCEEEEEECCCceEE
Confidence 3444 68899998888899999987543333221 2234567899976 4788888865 678999988765444
Q ss_pred EEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCC
Q psy14257 482 VIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTN 559 (841)
Q Consensus 482 ~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~ 559 (841)
..+. .....|.++++++.+++||++....+.|..+++........... ...|.++++. +.+||.+....+
T Consensus 205 ~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 205 ATVD-----LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp EEEE-----CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEEEEEESC
T ss_pred EEEc-----CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEEEECCCC
Confidence 3333 34567899999999999999998888999999876544333322 2346777774 235666553322
Q ss_pred eEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeE
Q psy14257 560 SVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFI 639 (841)
Q Consensus 560 ~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l 639 (841)
.+. ..+
T Consensus 277 ~~~------~~d-------------------------------------------------------------------- 282 (433)
T 3bws_A 277 NQE------SGG-------------------------------------------------------------------- 282 (433)
T ss_dssp TTC------SCC--------------------------------------------------------------------
T ss_pred ccc------cCC--------------------------------------------------------------------
Confidence 110 000
Q ss_pred EeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeeccccc
Q psy14257 640 IFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLS 719 (841)
Q Consensus 640 ~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~ 719 (841)
..|+.+++..... ...+.. ...+..++|++..+.+|++....++|+..++.+..
T Consensus 283 -----g~i~~~d~~~~~~--~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~----------------- 336 (433)
T 3bws_A 283 -----GRLGIYSMDKEKL--IDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKK----------------- 336 (433)
T ss_dssp -----EEEEEEETTTTEE--EEEEEE--EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTE-----------------
T ss_pred -----CeEEEEECCCCcE--EeeccC--CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCc-----------------
Confidence 0011111110000 000000 02356788999888999998889999999987654
Q ss_pred ccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCC------------CCeEEEEecCCcceEEEEcCCCCCCCc
Q psy14257 720 KRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPT------------QSKIVVCNLEGEYQTTILSNESNDTST 787 (841)
Q Consensus 720 ~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~------------~~~I~v~~l~g~~~~~~~~~~~~~~~~ 787 (841)
....+. ....|.+|++++.++.||.+..+.. .++|.++++........+..
T Consensus 337 ---------~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~------- 399 (433)
T 3bws_A 337 ---------VQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA------- 399 (433)
T ss_dssp ---------EEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-------
T ss_pred ---------EEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-------
Confidence 222222 3456899999999999999953211 23899999865544334443
Q ss_pred CCCceEEEEeCCCCeEEEEecCCCcceEEEEecCC
Q psy14257 788 LSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDG 822 (841)
Q Consensus 788 l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG 822 (841)
...|.+|+++|...+||.+.... ++|...++++
T Consensus 400 ~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~~~~~ 432 (433)
T 3bws_A 400 GNQPTGLDVSPDNRYLVISDFLD--HQIRVYRRDG 432 (433)
T ss_dssp SSSEEEEEECTTSCEEEEEETTT--TEEEEEEETT
T ss_pred CCCCceEEEcCCCCEEEEEECCC--CeEEEEEecC
Confidence 35899999999988998887644 3677777665
No 82
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.27 E-value=2.1e-10 Score=125.45 Aligned_cols=265 Identities=14% Similarity=0.116 Sum_probs=162.6
Q ss_pred cccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcc---cceEEEEeCCCCCccceEEeee---cCce
Q psy14257 238 TFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSL---SNIDVVVQTGLSTAEGLAVDWI---GKNL 311 (841)
Q Consensus 238 ~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~---~~~~~~~~~~l~~p~giavD~~---~~~~ 311 (841)
+..++.++.++..+.+|.|+..... ||+++. .++|++.+.++... .....+...+...|.|||+++. .+.+
T Consensus 7 g~~~~~va~~l~~P~~i~~~pdG~~--l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~l 83 (353)
T 2g8s_A 7 TVNVEVLQDKLDHPWALAFLPDNHG--MLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRI 83 (353)
T ss_dssp CSEEEEEEEEESSEEEEEECSTTCC--EEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEE
T ss_pred CcEEEEEECCCCCcEEEEEcCCCCE--EEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEE
Confidence 3466777788889999999886433 899986 58999987543210 0011122344557889999974 5567
Q ss_pred eEEEeeecCCCCCCCCCCEEEEccCCC-----ccccccc------cCcCCCceEEEEccCCEEEEEeCC-----------
Q psy14257 312 YMFWAFWSLSPSNSSDGGIEKAGMHGE-----NRSPLVT------KNIQWPSSLVIDYNQDILYWCDSH----------- 369 (841)
Q Consensus 312 y~~~td~~~~~~~~~~~~I~~~~~dG~-----~~~~l~~------~~~~~P~glavD~~~~~lYwaD~~----------- 369 (841)
|++.+..... .....+|.|+..++. ..++++. ...+.|.+|+++++ ++||++...
T Consensus 84 Yv~~~~~~~~--g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pd-G~Lyv~~Gd~~~~~~~q~~~ 160 (353)
T 2g8s_A 84 WLSYSEVGDD--GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGK-GYLFIALGENNQRPTAQDLD 160 (353)
T ss_dssp EEEEEEECSS--SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSS-SEEEEEECCTTCGGGGGCTT
T ss_pred EEEEeCCCCC--CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCC-CcEEEEECCCCCCCccCCCC
Confidence 7765543211 011347999887643 2233322 23567999999986 599999643
Q ss_pred --CCeEEEEEecCCc-------------cEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC---cEEEEccC
Q psy14257 370 --LNTVESVRVDGSE-------------RTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD---QIEVAKLS 431 (841)
Q Consensus 370 --~~~I~~~~ldG~~-------------~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~---~I~v~~~~ 431 (841)
.++|.|++.+|+. .+++. .|+.+...+++|..+++||++|...+ .|.++...
T Consensus 161 ~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a----------~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G 230 (353)
T 2g8s_A 161 KLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS----------YGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG 230 (353)
T ss_dssp SCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE----------ECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT
T ss_pred CCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE----------EcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccC
Confidence 4689999999862 22211 01111112345555699999997643 44443222
Q ss_pred Cce----------------------------EEEEecCCCCCceeEEEcC------CCCeEEEEecCCCCCeEEEecCCC
Q psy14257 432 GQF----------------------------RRTLIAGDMESPRAIALDP------RFGLLFWTDWDSKAPRIERCSMSG 477 (841)
Q Consensus 432 G~~----------------------------~~~l~~~~l~~P~giavd~------~~g~Ly~td~~~~~~~I~r~~ldG 477 (841)
+.+ ...........|.|+++.. .+|.||++++. ..+|.++.+++
T Consensus 231 ~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~--~~~v~~~~~~~ 308 (353)
T 2g8s_A 231 KNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALK--DKDVIVMSVNG 308 (353)
T ss_dssp CBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETT--TTEEEEEEEET
T ss_pred CcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEcc--CCEEEEEEeCC
Confidence 110 0000011123688999974 35899999998 78999999986
Q ss_pred CCcEEEEEecccCCCCCCceeEEEeccCCEEEEE-eCCCCeEEEEEc
Q psy14257 478 EHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWI-DAKSDSIHTVTY 523 (841)
Q Consensus 478 ~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~-d~~~~~I~~~~~ 523 (841)
.. .+....+.......|.+|++++ .+.||++ |...++|+++.+
T Consensus 309 ~~--~~~~~~~~~~~~~rp~~v~~~p-dG~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 309 DK--VTEDGRILTDRGQRIRDVRTGP-DGYLYVLTDESSGELLKVSP 352 (353)
T ss_dssp TE--EEEEEEESGGGCCCEEEEEECT-TSCEEEEECSTTEEEEEEEC
T ss_pred Ce--EeeeEEcccCCCCceeEEEECC-CCcEEEEEeCCCCEEEEEeC
Confidence 42 1211111112345899999996 4679996 667789998864
No 83
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.26 E-value=1.5e-12 Score=115.43 Aligned_cols=89 Identities=28% Similarity=0.562 Sum_probs=40.1
Q ss_pred CCCCCCCCccc--ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEee
Q psy14257 121 ACFNGEDEMFC--DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTC 198 (841)
Q Consensus 121 ~C~~g~de~~C--~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C 198 (841)
...+++....| +||...++.|++.|.+++++|.|.|++||.+. +++.|++++||....+|.+.|.++ .++|+|.|
T Consensus 17 ~~~~~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~~~~C~~~C~n~--~gsy~C~C 93 (107)
T 2w2n_E 17 TTENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQDPDTCSQLCVNL--EGGYKCQC 93 (107)
T ss_dssp ---CCCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC---------------------------
T ss_pred ccCCCcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccCCCCCcCCeeecC--CCCEEEEC
Confidence 34556666667 78886667899999999999999999999975 678999999997557899999999 99999999
Q ss_pred cCCeeecCCCCceE
Q psy14257 199 HAGYELEPDMFTCK 212 (841)
Q Consensus 199 ~~G~~l~~d~~~C~ 212 (841)
++||.+..++++|+
T Consensus 94 ~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 94 EEGFQLDPHTKACK 107 (107)
T ss_dssp --------------
T ss_pred CCCceECCCCCccC
Confidence 99999988888774
No 84
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.26 E-value=4.2e-09 Score=113.50 Aligned_cols=113 Identities=13% Similarity=0.074 Sum_probs=81.8
Q ss_pred CCCCceeEEEcCC---CCeEEEEecCCCCCeEEEecCCCC--------CcEEEEEecccCCCCCCceeEEEeccCCEEEE
Q psy14257 442 DMESPRAIALDPR---FGLLFWTDWDSKAPRIERCSMSGE--------HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYW 510 (841)
Q Consensus 442 ~l~~P~giavd~~---~g~Ly~td~~~~~~~I~r~~ldG~--------~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw 510 (841)
+...|.|||++|. +|+||++.......+|.|+.+++. ..++|+.. +.....+.+..|++++ .++||+
T Consensus 78 g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~-~p~~~~H~g~~l~fgp-DG~Lyv 155 (347)
T 3das_A 78 GEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRG-IPKGVIHNGGRIAFGP-DKMLYA 155 (347)
T ss_dssp TTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEE-ECCCSSCCCCCEEECT-TSCEEE
T ss_pred CCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEc-CCCCCCccCccccCCC-CCCEEE
Confidence 4567999999995 789998754323679999998762 24455431 1113456678899996 579999
Q ss_pred EeC-------------CCCeEEEEEcCCC--------eeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCC
Q psy14257 511 IDA-------------KSDSIHTVTYDGK--------DHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTN 559 (841)
Q Consensus 511 ~d~-------------~~~~I~~~~~dG~--------~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~ 559 (841)
+.. ..++|.++++||+ ..+++..+ +.+|+||++. .+.||++|....
T Consensus 156 t~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G---~RNp~Gla~dp~G~L~~~d~g~~ 223 (347)
T 3das_A 156 GTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYG---HRNVQGLAWDDKQRLFASEFGQD 223 (347)
T ss_dssp ECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBC---CSBCCEEEECTTCCEEEEECCSS
T ss_pred EECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeC---CCCcceEEECCCCCEEEEecCCC
Confidence 942 3689999999997 44444433 6889999996 589999997653
No 85
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.26 E-value=3.9e-10 Score=121.95 Aligned_cols=209 Identities=13% Similarity=0.132 Sum_probs=142.5
Q ss_pred cccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc-ccceEEEEec
Q psy14257 342 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW-IGKNLYWVES 420 (841)
Q Consensus 342 ~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw-~~~~LY~tD~ 420 (841)
.+.......|.|+++|++++.|||+|...+.|+++++++...+.+... ... ..+.| -.+++|++.
T Consensus 42 ~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~-----~~v--------~~i~~~~dg~l~v~~- 107 (326)
T 2ghs_A 42 VLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALP-----FMG--------SALAKISDSKQLIAS- 107 (326)
T ss_dssp EEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECS-----SCE--------EEEEEEETTEEEEEE-
T ss_pred EeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECC-----Ccc--------eEEEEeCCCeEEEEE-
Confidence 344445678899999999999999999999999999988765443210 000 01111 126777775
Q ss_pred CCCcEEEEccCCceEEEEecC----CCCCceeEEEcCCCCeEEEEecCC----CCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 421 NLDQIEVAKLSGQFRRTLIAG----DMESPRAIALDPRFGLLFWTDWDS----KAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 421 ~~~~I~v~~~~G~~~~~l~~~----~l~~P~giavd~~~g~Ly~td~~~----~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
.+.|.++++++...+.+... ....|+++++|+. |.||+++.+. ....|++++ +|+... +.. .
T Consensus 108 -~~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~-G~l~v~~~~~~~~~~~~~l~~~~-~g~~~~-~~~------~ 177 (326)
T 2ghs_A 108 -DDGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPS-GALWIGTMGRKAETGAGSIYHVA-KGKVTK-LFA------D 177 (326)
T ss_dssp -TTEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTT-SCEEEEEEETTCCTTCEEEEEEE-TTEEEE-EEE------E
T ss_pred -CCCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCC-CCEEEEeCCCcCCCCceEEEEEe-CCcEEE-eeC------C
Confidence 34588888865444444321 1246899999986 6788887531 146899998 654332 222 3
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcC---C-C--eeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEe
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD---G-K--DHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d---G-~--~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~ 565 (841)
+..|++++++++++.|||++...+.|.+++++ | . .++.+.........|.+++++ ++.||++.+..+.|.+++
T Consensus 178 ~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 178 ISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp ESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred CcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 45799999998888999999988999999986 4 2 223343322223578999996 589999999888999998
Q ss_pred ccCCcceEEE
Q psy14257 566 KWNGSDVTLI 575 (841)
Q Consensus 566 ~~~g~~~~~i 575 (841)
+ +|+....+
T Consensus 258 ~-~g~~~~~i 266 (326)
T 2ghs_A 258 T-DGNHIARY 266 (326)
T ss_dssp T-TCCEEEEE
T ss_pred C-CCCEEEEE
Confidence 7 55544433
No 86
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.25 E-value=3.5e-10 Score=120.80 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=144.4
Q ss_pred ccCcCCCceEEEEccCCEEEEE-------eCCCCeEEEEEecCCccEEEEeeeee-cCCCccccCCCCCCccccccceEE
Q psy14257 345 TKNIQWPSSLVIDYNQDILYWC-------DSHLNTVESVRVDGSERTVSFNLEVL-GSDSRVGIPNCRPEDNLWIGKNLY 416 (841)
Q Consensus 345 ~~~~~~P~glavD~~~~~lYwa-------D~~~~~I~~~~ldG~~~~~~~~~~~~-~~~~~~~i~~~~~~avdw~~~~LY 416 (841)
...+..|.++++| .+++|||+ +...+.|.+++++....+.+...... ......+ +++|..+++||
T Consensus 14 ~~~~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~------i~~~~~~g~l~ 86 (314)
T 1pjx_A 14 TEDIPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAG------CQCDRDANQLF 86 (314)
T ss_dssp ECCCTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEE------EEECSSSSEEE
T ss_pred hccCCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCce------EEEecCCCcEE
Confidence 4578899999999 56789999 88889999999765554433220000 0001111 23344447899
Q ss_pred EEecCCCcEEEEccCCceEEEE-ecC----CCCCceeEEEcCCCCeEEEEecCCC-------------CCeEEEecCCCC
Q psy14257 417 WVESNLDQIEVAKLSGQFRRTL-IAG----DMESPRAIALDPRFGLLFWTDWDSK-------------APRIERCSMSGE 478 (841)
Q Consensus 417 ~tD~~~~~I~v~~~~G~~~~~l-~~~----~l~~P~giavd~~~g~Ly~td~~~~-------------~~~I~r~~ldG~ 478 (841)
+++... .|.+++++|+.. .+ ... ....|.+|++|+. |.||+++.... ...|++.+.+|+
T Consensus 87 v~~~~~-~l~~~d~~g~~~-~~~~~~~~~~~~~~~~~i~~d~~-g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~ 163 (314)
T 1pjx_A 87 VADMRL-GLLVVQTDGTFE-EIAKKDSEGRRMQGCNDCAFDYE-GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ 163 (314)
T ss_dssp EEETTT-EEEEEETTSCEE-ECCSBCTTSCBCBCCCEEEECTT-SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC
T ss_pred EEECCC-CEEEEeCCCCEE-EEEeccCCCccccCCcCEEECCC-CCEEEEecCcccccccccccccCCCCeEEEECCCCC
Confidence 998753 799999886543 33 221 2356999999985 78999986510 268999998854
Q ss_pred CcEEEEEecccCCCCCCceeEEEe----ccCCEEEEEeCCCCeEEEEEcC--CCe--eEEEEcCCCCC-CcceEEEEe-c
Q psy14257 479 HRSVIVRVDLLTSRGAWPNGLTLD----YQLTRIYWIDAKSDSIHTVTYD--GKD--HHVVLSNHDSL-THPFAIALF-E 548 (841)
Q Consensus 479 ~~~~i~~~~~~~~~~~~P~glalD----~~~~~LYw~d~~~~~I~~~~~d--G~~--~~~i~~~~~~l-~~P~gla~~-~ 548 (841)
... +.. .+..|++++++ +.+++||+++...++|.+++++ |.. .+.+....... ..|.+|++. +
T Consensus 164 ~~~-~~~------~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 164 MIQ-VDT------AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED 236 (314)
T ss_dssp EEE-EEE------EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred EEE-ecc------CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC
Confidence 332 322 35679999999 8777999999988999999976 321 12232222112 568999996 5
Q ss_pred CeEEEEeCCCCeEEEEeccCCcceEE
Q psy14257 549 NHVYWTDWRTNSVIRANKWNGSDVTL 574 (841)
Q Consensus 549 ~~lY~td~~~~~i~~~~~~~g~~~~~ 574 (841)
++||++++..+.|.++++.+|+....
T Consensus 237 G~l~v~~~~~~~i~~~d~~~g~~~~~ 262 (314)
T 1pjx_A 237 NNLLVANWGSSHIEVFGPDGGQPKMR 262 (314)
T ss_dssp CCEEEEEETTTEEEEECTTCBSCSEE
T ss_pred CCEEEEEcCCCEEEEEcCCCCcEeEE
Confidence 89999998889999999876664443
No 87
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.22 E-value=7.4e-10 Score=117.00 Aligned_cols=243 Identities=12% Similarity=-0.001 Sum_probs=150.6
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCC-------CccceEE---eeecCceeEEEeeec
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLS-------TAEGLAV---DWIGKNLYMFWAFWS 319 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~-------~p~giav---D~~~~~~y~~~td~~ 319 (841)
-+.+++||...++ +|+++...++|.++++.++. ...+...++. .|.||.+ |+. +.|++. ++.+
T Consensus 14 yPE~~~wd~~~g~--~~vs~l~~g~V~~~~~~~~~---~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv-~~~~ 86 (334)
T 2p9w_A 14 TPEDTIYDRTRQV--FYQSNLYKGRIEVYNPKTQS---HFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAV-MKNA 86 (334)
T ss_dssp CCSCEEEETTTTE--EEEEETTTTEEEEECTTTCC---EEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEE-EEET
T ss_pred CCcCccCcCCCCE--EEEEeccCCEEEEEcCCCCe---EEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEE-Eccc
Confidence 3668889887666 99999999999999887554 2222333332 5789999 676 566664 5532
Q ss_pred CC----CCC-CCCCCEEEEccC----CCcccccccc------------CcCCCceEEEEccCCEEEEEeCCCCeEEEEEe
Q psy14257 320 LS----PSN-SSDGGIEKAGMH----GENRSPLVTK------------NIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 378 (841)
Q Consensus 320 ~~----~~~-~~~~~I~~~~~d----G~~~~~l~~~------------~~~~P~glavD~~~~~lYwaD~~~~~I~~~~l 378 (841)
.. +.+ .....+.+++++ |+.+..+... ....|++|++|.+
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~------------------- 147 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD------------------- 147 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-------------------
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-------------------
Confidence 11 001 124578899988 4433322211 2234778888854
Q ss_pred cCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCC-CcEEEEccCCceEEEEecC-----CCCCceeEEEc
Q psy14257 379 DGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNL-DQIEVAKLSGQFRRTLIAG-----DMESPRAIALD 452 (841)
Q Consensus 379 dG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~-~~I~v~~~~G~~~~~l~~~-----~l~~P~giavd 452 (841)
|++|++++.. +.|.+++.+|+...++... ....|.|||++
T Consensus 148 ----------------------------------GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~ 193 (334)
T 2p9w_A 148 ----------------------------------GNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFD 193 (334)
T ss_dssp ----------------------------------SCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEE
T ss_pred ----------------------------------CCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEe
Confidence 6777777666 7777777777654433321 12347799999
Q ss_pred CCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe--cccCCCCCCceeE-EEeccCCEEEEEeCCCCeEEEEEcCCCeeE
Q psy14257 453 PRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV--DLLTSRGAWPNGL-TLDYQLTRIYWIDAKSDSIHTVTYDGKDHH 529 (841)
Q Consensus 453 ~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~--~~~~~~~~~P~gl-alD~~~~~LYw~d~~~~~I~~~~~dG~~~~ 529 (841)
|.+..|++.+. .++|++++++-..+..+... +.. ..+..|.|| ++.+.+.-|++++...+.+...+.||-...
T Consensus 194 pdg~~Liv~~~---~g~L~~fD~~~pv~~~v~~~~~G~~-~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa 269 (334)
T 2p9w_A 194 PHSNKLIAFGG---PRALTAFDVSKPYAWPEPVKINGDF-GTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSA 269 (334)
T ss_dssp TTTTEEEEESS---SSSEEEEECSSSSCCCEECEESSCC-CCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEE
T ss_pred CCCCEEEEEcC---CCeEEEEcCCCCcceeecccccCCc-ccccCcccccccccCCEEEEEEcCCCCEEEEECCCCccee
Confidence 98778888875 58999999983222112110 101 256789995 777666666999987778888888883222
Q ss_pred EEEc-CCCCCCcceEEEEe-------cCeEEEEeCC
Q psy14257 530 VVLS-NHDSLTHPFAIALF-------ENHVYWTDWR 557 (841)
Q Consensus 530 ~i~~-~~~~l~~P~gla~~-------~~~lY~td~~ 557 (841)
.+.. ....+. +.|+++. +++||+.+..
T Consensus 270 ~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 270 NIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECC
T ss_pred EEeeeecCccc-cCceeEEEEeccccCCeEEEEeee
Confidence 2221 112222 4555543 5889998854
No 88
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.22 E-value=1e-09 Score=122.08 Aligned_cols=286 Identities=10% Similarity=0.076 Sum_probs=174.3
Q ss_pred eEEEecCC----CeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC-Cc
Q psy14257 265 VFWTDVID----DKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-EN 339 (841)
Q Consensus 265 lyw~d~~~----~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~~ 339 (841)
+|+++... +.|.++++..+. .. ..+..+. .| |+++++.++.+|+.-+..+........+.|..++... +.
T Consensus 87 vyV~n~~~~~~~~~VsVID~~t~~--vv-~~I~vG~-~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 87 VYIQDPAHFAAITQQFVIDGSTGR--IL-GMTDGGF-LP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTE--EE-EEEEECS-SC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred EEEECCCcCCCCCeEEEEECCCCE--EE-EEEECCC-CC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 89998765 688888876553 22 2233343 68 9999998888887543211000000123678887653 33
Q ss_pred ccccccc---C---cCCCceEEEEccCCEEEEEeCC-CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc
Q psy14257 340 RSPLVTK---N---IQWPSSLVIDYNQDILYWCDSH-LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG 412 (841)
Q Consensus 340 ~~~l~~~---~---~~~P~glavD~~~~~lYwaD~~-~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~ 412 (841)
...+... . ...|.++++++++++||+++.. .+.|..+++........+.+... . .+...+
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~-----~--------~~~p~g 228 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC-----Y--------HIFPAS 228 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----E--------EEEEEE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-----e--------eeccCC
Confidence 3333211 1 3579999999999999999975 78999998876544332222100 0 011112
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEe---cCCCCCcee--EEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLI---AGDMESPRA--IALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD 487 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~---~~~l~~P~g--iavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~ 487 (841)
.++|++....+++.++++......... -.--..|.. +++.+..+.+|++.. .++|+.+++.+....++....
T Consensus 229 ~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~---~g~V~ViD~~~~~~~v~~~~~ 305 (426)
T 3c75_H 229 PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY---TGKIFQADLTAEGATFRAPIE 305 (426)
T ss_dssp TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT---TSEEEEEEECSSCEEECCCEE
T ss_pred CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC---CCcEEEEeccCCceEEeeeee
Confidence 455666656666665555322211111 011134533 455888788888764 368999998776544332110
Q ss_pred ccC----CCCCCcee---EEEeccCCEEEEEeC---------CCCeEEEEEcCCCee-EEEEcCCCCCCcceEEEEe--c
Q psy14257 488 LLT----SRGAWPNG---LTLDYQLTRIYWIDA---------KSDSIHTVTYDGKDH-HVVLSNHDSLTHPFAIALF--E 548 (841)
Q Consensus 488 ~~~----~~~~~P~g---lalD~~~~~LYw~d~---------~~~~I~~~~~dG~~~-~~i~~~~~~l~~P~gla~~--~ 548 (841)
... .....|.| +++++.+++||+++. ..+.|..+|+....+ .++... ..|.+|++. +
T Consensus 306 ~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg----~~P~gia~spDg 381 (426)
T 3c75_H 306 ALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG----HEIDSINVSQDA 381 (426)
T ss_dssp SSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECCSS
T ss_pred eccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC----CCcCeEEEccCC
Confidence 000 01123555 899999999999974 235799999876543 334221 369999994 4
Q ss_pred C-eEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 549 N-HVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 549 ~-~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
. ++|++.+..+.|..++..+++.+..|
T Consensus 382 ~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 382 EPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp SCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 5 79999999999999999888877665
No 89
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.21 E-value=2e-09 Score=111.00 Aligned_cols=205 Identities=15% Similarity=0.135 Sum_probs=139.5
Q ss_pred CCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc-ceEEEEecCCCcEEE
Q psy14257 349 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG-KNLYWVESNLDQIEV 427 (841)
Q Consensus 349 ~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~-~~LY~tD~~~~~I~v 427 (841)
..++||++|+++++||.+.-..++|.+++++|...+.+. ..... .++++.+.+ +.+|+++...+++.+
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~-l~g~~----------D~EGIa~~~~g~~~vs~E~~~~l~~ 95 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP-LDFVK----------DLETIEYIGDNQFVISDERDYAIYV 95 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE-CSSCS----------SEEEEEECSTTEEEEEETTTTEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe-cCCCC----------ChHHeEEeCCCEEEEEECCCCcEEE
Confidence 468999999999999987777899999999976555441 11111 112333333 556678888889998
Q ss_pred EccCCce-EE--EEecCCC-CCc-----eeEEEcCCCCeEEEEecCCCCC-eEEEec--CCCCCcEEEEEec-c-cCCCC
Q psy14257 428 AKLSGQF-RR--TLIAGDM-ESP-----RAIALDPRFGLLFWTDWDSKAP-RIERCS--MSGEHRSVIVRVD-L-LTSRG 493 (841)
Q Consensus 428 ~~~~G~~-~~--~l~~~~l-~~P-----~giavd~~~g~Ly~td~~~~~~-~I~r~~--ldG~~~~~i~~~~-~-~~~~~ 493 (841)
+.++... .. ....-.+ ..| .|||+||.++.||.+... .+ .|++.+ +.+...+++ ... + ....+
T Consensus 96 ~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~--~p~~i~~~~g~~~~~~l~i~-~~~~~~~~~~~ 172 (255)
T 3qqz_A 96 ISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK--NPIEVYKVNGLLSSNELHIS-KDKALQRQFTL 172 (255)
T ss_dssp EEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES--SSEEEEEEESTTCSSCCEEE-ECHHHHHTCCS
T ss_pred EEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc--CCceEEEEcccccCCceeee-cchhhcccccc
Confidence 8765432 11 1111112 234 899999998899998765 34 788887 222223332 210 0 11346
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC------CCCCcceEEEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH------DSLTHPFAIALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~------~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~ 566 (841)
..+.+|++|+.+++||+.....+.|..++.+|..+..+.-.. ..+++|-|||++ +|+||++.-. +.++++.|
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~ 251 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTP 251 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEe
Confidence 679999999999999999999999999999998655543322 135789999995 5899999654 68888877
Q ss_pred cC
Q psy14257 567 WN 568 (841)
Q Consensus 567 ~~ 568 (841)
..
T Consensus 252 ~~ 253 (255)
T 3qqz_A 252 QS 253 (255)
T ss_dssp --
T ss_pred cC
Confidence 54
No 90
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=2.4e-08 Score=109.90 Aligned_cols=285 Identities=11% Similarity=0.021 Sum_probs=170.7
Q ss_pred eEEEec-CCC---eEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC-Cc
Q psy14257 265 VFWTDV-IDD---KIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-EN 339 (841)
Q Consensus 265 lyw~d~-~~~---~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~~ 339 (841)
+|.+|. ..+ .|+++++..+. ....+..+. .| +|++.|.++.+|+.-+.+........++.|.+++... +.
T Consensus 35 ~yv~~~~~~~~~~~v~v~D~~t~~---~~~~i~~g~-~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~ 109 (373)
T 2mad_H 35 SYINLPAHHSAIIQQWVLDAGSGS---ILGHVNGGF-LP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLP 109 (373)
T ss_pred EEEeCCcccCCccEEEEEECCCCe---EEEEecCCC-CC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcE
Confidence 777776 444 66777665543 122334443 57 9999999888887543222100001234688888753 22
Q ss_pred ccccccc---C---cCCCceEEEEccCCEEEEEeCC-CCeEEEEEecCCccEEE-EeeeeecCCCccccCCCCCCccccc
Q psy14257 340 RSPLVTK---N---IQWPSSLVIDYNQDILYWCDSH-LNTVESVRVDGSERTVS-FNLEVLGSDSRVGIPNCRPEDNLWI 411 (841)
Q Consensus 340 ~~~l~~~---~---~~~P~glavD~~~~~lYwaD~~-~~~I~~~~ldG~~~~~~-~~~~~~~~~~~~~i~~~~~~avdw~ 411 (841)
...+... . ...|.++++++++++||++... .+.|..++ +....... +.... . ..+...
T Consensus 110 ~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~-----~--------~~~~~~ 175 (373)
T 2mad_H 110 IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT-----C--------YHIHPG 175 (373)
T ss_pred EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-----e--------EEEEeC
Confidence 2222111 0 2579999999999999999875 68899998 65543222 21110 0 011122
Q ss_pred cceEEEEecCCCcEEEEccCCceEEEEec-C--CCCCce--eEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 412 GKNLYWVESNLDQIEVAKLSGQFRRTLIA-G--DMESPR--AIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~G~~~~~l~~-~--~l~~P~--giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
++++|++....+++.++++.|+....... . .-..|. ..++.+..+.+||... .++++.+++.+...+++...
T Consensus 176 ~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~v~vid~~~~~~~v~~~~ 252 (373)
T 2mad_H 176 APSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY---SGKILQADISAAGATNKAPI 252 (373)
T ss_pred CCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcC---CceEEEEeccCCcceEeeee
Confidence 35678877777888877775544322110 0 012232 2234555567777663 46899999876544433221
Q ss_pred cccC----CCCCCcee---EEEeccCCEEEEEeC---------CCCeEEEEEcCCCee-EEEEcCCCCCCcceEEEEe--
Q psy14257 487 DLLT----SRGAWPNG---LTLDYQLTRIYWIDA---------KSDSIHTVTYDGKDH-HVVLSNHDSLTHPFAIALF-- 547 (841)
Q Consensus 487 ~~~~----~~~~~P~g---lalD~~~~~LYw~d~---------~~~~I~~~~~dG~~~-~~i~~~~~~l~~P~gla~~-- 547 (841)
.... .....|.| +++++.+++||++.. ..+.|..+|+....+ .++... ..|.+|++.
T Consensus 253 ~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g----~~p~~i~~s~D 328 (373)
T 2mad_H 253 DALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG----HDVDAISVAQD 328 (373)
T ss_pred eecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC----CCcCeEEECCC
Confidence 1000 11224666 899999999999864 246899999986555 444322 368999995
Q ss_pred cC-eEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 548 EN-HVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 548 ~~-~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
+. .+|++.+..+.|..++..+++.+..+
T Consensus 329 g~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 329 GGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 34 68888888899999998888776654
No 91
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.18 E-value=6e-09 Score=114.33 Aligned_cols=263 Identities=11% Similarity=0.031 Sum_probs=160.4
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEec-CCcccceEEEEeCCCCCccceEEeeecCceeEEEee------ecCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLI-GNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAF------WSLS 321 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~-~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td------~~~~ 321 (841)
..+..+.|+...+. ||.++.. .|...+++ .|.+ ....-......|..+++++.++.+|++.++ +++.
T Consensus 40 ~~~~~~a~spdg~~--l~~~~~~--~v~~~~~~~~g~~--~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 40 EPISWMTFDHERKN--IYGAAMK--KWSSFAVKSPTEI--VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp CCCSEEEECTTSSE--EEEEEBT--EEEEEEEEETTEE--EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCcEEEECCCCCE--EEEEccc--eEEEEEECCCCCE--EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 45667777775444 8988765 77777765 4432 111111111258889999877555666554 1100
Q ss_pred CCCCCCCCEEEEcc--CCCccccccc---cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEec-CCccEEEEeeeeec-C
Q psy14257 322 PSNSSDGGIEKAGM--HGENRSPLVT---KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSERTVSFNLEVLG-S 394 (841)
Q Consensus 322 ~~~~~~~~I~~~~~--dG~~~~~l~~---~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ld-G~~~~~~~~~~~~~-~ 394 (841)
. -..++.|..+.+ +|+....+.. .....|.++++++++++||++|...++|+.++++ ....+.+.....-. .
T Consensus 114 ~-~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 114 F-YKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp E-SSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred e-ecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 0 002345555555 4543332221 2346799999999999999999988999999997 44333322211000 0
Q ss_pred CCccccCCCCCCccccccceEEEEecCCCcEEEEccC---CceEE---EE--ecCCC---C-------CceeEE-EcCCC
Q psy14257 395 DSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS---GQFRR---TL--IAGDM---E-------SPRAIA-LDPRF 455 (841)
Q Consensus 395 ~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~---G~~~~---~l--~~~~l---~-------~P~gia-vd~~~ 455 (841)
..+ +.++++..++.||+++...+.|.+++++ |+... .+ +..++ . .|.+|+ ++|+.
T Consensus 193 ~~p------~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG 266 (365)
T 1jof_A 193 DHP------RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG 266 (365)
T ss_dssp CCE------EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS
T ss_pred CCC------CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC
Confidence 011 1124555567899998877888888765 54321 22 11111 2 489999 99998
Q ss_pred CeEEEEecCCC---CCeEEEecCC--CCCcEE--EEEecccCCCCCCceeEEEec---cCCEEEEEeCCCCeEEEEEcCC
Q psy14257 456 GLLFWTDWDSK---APRIERCSMS--GEHRSV--IVRVDLLTSRGAWPNGLTLDY---QLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 456 g~Ly~td~~~~---~~~I~r~~ld--G~~~~~--i~~~~~~~~~~~~P~glalD~---~~~~LYw~d~~~~~I~~~~~dG 525 (841)
.+||.++.+.. .+.|...+++ |..... ... .....|.++++++ .+++||+++...+.|..+++++
T Consensus 267 ~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~-----~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 267 KYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSP-----TPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp SEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEE-----CSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred CEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeee-----cCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 89999986521 1166666654 432221 122 2334689999998 6899999998888999998887
Q ss_pred CeeE
Q psy14257 526 KDHH 529 (841)
Q Consensus 526 ~~~~ 529 (841)
...+
T Consensus 342 ~~l~ 345 (365)
T 1jof_A 342 EFLH 345 (365)
T ss_dssp TEEE
T ss_pred hhCc
Confidence 7443
No 92
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.18 E-value=2.2e-07 Score=107.58 Aligned_cols=335 Identities=7% Similarity=0.028 Sum_probs=203.9
Q ss_pred ceEEEEecCCCcEEEEccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+.+|++....+.|.+.+.+. +...++- .+. .|.+++++|.+.+||.++.+ ..|...+++....+.+... .
T Consensus 149 ~~~~vs~~~d~~V~v~D~~t~~~~~~i~-~g~-~~~~v~~spdg~~l~v~~~d---~~V~v~D~~~~t~~~~~~i----~ 219 (543)
T 1nir_A 149 NLFSVTLRDAGQIALVDGDSKKIVKVID-TGY-AVHISRMSASGRYLLVIGRD---ARIDMIDLWAKEPTKVAEI----K 219 (543)
T ss_dssp GEEEEEEGGGTEEEEEETTTCCEEEEEE-CST-TEEEEEECTTSCEEEEEETT---SEEEEEETTSSSCEEEEEE----E
T ss_pred CEEEEEEcCCCeEEEEECCCceEEEEEe-cCc-ccceEEECCCCCEEEEECCC---CeEEEEECcCCCCcEEEEE----e
Confidence 78999999999999999864 4444443 232 39999999999999999865 7899988852223333322 2
Q ss_pred CCCCceeEEEec----cCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC---------CCCcceEEEEe--cCeEEEEeC
Q psy14257 492 RGAWPNGLTLDY----QLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD---------SLTHPFAIALF--ENHVYWTDW 556 (841)
Q Consensus 492 ~~~~P~glalD~----~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~---------~l~~P~gla~~--~~~lY~td~ 556 (841)
....|.++++++ ++++||++....+.|..++.........+...+ .-.++.+|++. +.++|++..
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 345799999998 899999999777899999876543333222210 01245677763 578999998
Q ss_pred CCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCc
Q psy14257 557 RTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636 (841)
Q Consensus 557 ~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~ 636 (841)
..+.|..++..+++...+..... + .-|.+..+.+| .
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~--------------------------------~----~~~~~~~~spd--------g 335 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGA--------------------------------A----PFLHDGGWDSS--------H 335 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEEC--------------------------------C----SSCCCEEECTT--------S
T ss_pred CCCeEEEEEecCCCcceeEEecc--------------------------------C----cCccCceECCC--------C
Confidence 89999988876655433111000 0 00122223333 2
Q ss_pred eeEEeec--CCeEEEEecCCCCccccceeecCCCCCc-eEEE-EecCCCEEEEEEC-CCCeEEEEEcccCceeeeeeeee
Q psy14257 637 QFIIFSR--PREIRGVDLEHPYYHTIPTISIPQVFSP-NNLN-FDAANKKIYWTDQ-EYNEVKRSSIVGGQIQLVVDAVF 711 (841)
Q Consensus 637 ~~l~~~~--~~~i~~~~l~~~~~~~~~~~~~~~~~~~-~~v~-~d~~~~~iyw~d~-~~~~I~~~~~~g~~~~~~~~~~~ 711 (841)
.+++++. .+.|..+++.... ....+++....++ .++. ++|..+.+|.+.. ..++|..++.+....
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~--l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~-------- 405 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRR--LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNH-------- 405 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTE--EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC--------
T ss_pred CEEEEEecCCCeEEEEECCCCe--EEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCC--------
Confidence 3444442 3467666665332 2223344333332 1222 5777788888874 568999998875210
Q ss_pred eeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEec-CC---CCCeEEEEecCCcc-e-EEE-Ec---CC
Q psy14257 712 EFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVS-SP---TQSKIVVCNLEGEY-Q-TTI-LS---NE 781 (841)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~-~~---~~~~I~v~~l~g~~-~-~~~-~~---~~ 781 (841)
+.......++ +...-..+..|++.+.+++||.... .. ..++|.+++++... . +++ +. +
T Consensus 406 ----------~~~~~~~v~~-l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~- 473 (543)
T 1nir_A 406 ----------PQYAWKKVAE-LQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWAD- 473 (543)
T ss_dssp ----------TTTBTSEEEE-EECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHC-
T ss_pred ----------chhcCeEEEE-EEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcc-
Confidence 0000111223 3333356788999999999998720 01 14589999987443 2 333 11 1
Q ss_pred CCCCCcCCCceEEEEeCCCCeEEEEecCCC--cceEEEEecCCCc
Q psy14257 782 SNDTSTLSKISSIAVWPVKGKMFWSNVTKQ--VVTIEMAFMDGTK 824 (841)
Q Consensus 782 ~~~~~~l~~p~~iavd~~~g~lyw~d~~~~--~~~I~~~~~dG~~ 824 (841)
..+. -..+..+++.|...+||.+.|+.+ ...|...+..-..
T Consensus 474 ~~~~--~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 474 LGEG--AKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp CCSS--CCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred cCCC--CCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 0000 368999999999999999988531 1467775544333
No 93
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.17 E-value=6.2e-08 Score=108.25 Aligned_cols=224 Identities=12% Similarity=0.045 Sum_probs=143.5
Q ss_pred CEEEEccCCCccccccc-cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 329 GIEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~-~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
+|++.+.++.....+.. ..-..|.++++++ ++++|++....+.|...+++............+..... ...+
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~------~v~~ 174 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG------FVET 174 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC------EEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC------ceeE
Confidence 55555554332222221 1234578899998 89999999988999999998655443322111100000 0011
Q ss_pred ccc-ccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 408 NLW-IGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 408 vdw-~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
+.| -++++|++....+.|.+.+++.......+......|.+++++|.+.+||++... .+.|...+++........
T Consensus 175 ~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~i~~~d~~~~~~~~~~-- 250 (433)
T 3bws_A 175 ISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI--SEDISVIDRKTKLEIRKT-- 250 (433)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT--TTEEEEEETTTTEEEEEC--
T ss_pred EEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC--CCcEEEEECCCCcEEEEe--
Confidence 222 237899999888999999987644333333445689999999998999999865 578999988643322222
Q ss_pred cccCCCCCCceeEEEeccCCEEEEEeC-------CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCC
Q psy14257 487 DLLTSRGAWPNGLTLDYQLTRIYWIDA-------KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWR 557 (841)
Q Consensus 487 ~~~~~~~~~P~glalD~~~~~LYw~d~-------~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~ 557 (841)
.....|.++++++.++.||.+.. ..+.|..+++........... ...|.++++. +.++|++...
T Consensus 251 ----~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~ 323 (433)
T 3bws_A 251 ----DKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGP---PGNKRHIVSGNTENKIYVSDMC 323 (433)
T ss_dssp ----CCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEE---EECEEEEEECSSTTEEEEEETT
T ss_pred ----cCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccC---CCCcceEEECCCCCEEEEEecC
Confidence 23345899999988889998874 346888999876544333321 1356777774 3478888877
Q ss_pred CCeEEEEeccCCc
Q psy14257 558 TNSVIRANKWNGS 570 (841)
Q Consensus 558 ~~~i~~~~~~~g~ 570 (841)
.+.|..++..+++
T Consensus 324 ~~~v~v~d~~~~~ 336 (433)
T 3bws_A 324 CSKIEVYDLKEKK 336 (433)
T ss_dssp TTEEEEEETTTTE
T ss_pred CCEEEEEECCCCc
Confidence 7777777765443
No 94
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.16 E-value=2.6e-09 Score=110.06 Aligned_cols=212 Identities=8% Similarity=0.075 Sum_probs=141.1
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 376 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~ 376 (841)
..+.|||+|+.++.+|.. +| ..++|.+.+++|...+.+...+...|.||+++. ++++|+++...++|..+
T Consensus 27 ~~lSGla~~~~~~~L~aV-~d--------~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~-~g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFST-IN--------KPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIG-DNQFVISDERDYAIYVI 96 (255)
T ss_dssp SCEEEEEEETTTTEEEEE-EE--------TTEEEEEEETTCCEEEEEECSSCSSEEEEEECS-TTEEEEEETTTTEEEEE
T ss_pred cCcceeEEeCCCCEEEEE-EC--------CCCeEEEEeCCCCEEEEEecCCCCChHHeEEeC-CCEEEEEECCCCcEEEE
Confidence 578999999876556542 22 246899999998877777666778999999984 56788999888999999
Q ss_pred EecCCccEEEEeeeeecCCCccccCCC--CCCccccccceEEEEecCCC-cEEEEc--cCCceEEEEe------cCCCCC
Q psy14257 377 RVDGSERTVSFNLEVLGSDSRVGIPNC--RPEDNLWIGKNLYWVESNLD-QIEVAK--LSGQFRRTLI------AGDMES 445 (841)
Q Consensus 377 ~ldG~~~~~~~~~~~~~~~~~~~i~~~--~~~avdw~~~~LY~tD~~~~-~I~v~~--~~G~~~~~l~------~~~l~~ 445 (841)
.++............+ +......+. .++++|..+++||++..... .|+.++ +.+...+++- ...+..
T Consensus 97 ~v~~~~~i~~~~~~~~--~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKI--PLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp EECTTCCEEEEEEEEC--CCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSC
T ss_pred EcCCCCeeeeeeeecc--ccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCC
Confidence 8876543111111111 110001111 23456667789999875543 666665 1222222221 123568
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc----cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEE
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL----LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTV 521 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~----~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~ 521 (841)
+.+|++||..|+||+.... +..|..++.+|..+..+ .... ....+..|.|||+|+ +++||++... +.++++
T Consensus 175 ~S~l~~dp~tg~lliLS~~--s~~L~~~d~~g~~~~~~-~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE~-n~~y~f 249 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHE--SRALQEVTLVGEVIGEM-SLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSEP-NRFYRF 249 (255)
T ss_dssp CCEEEEETTTTEEEEEETT--TTEEEEECTTCCEEEEE-ECSTTGGGCSSCCCSEEEEEECT-TCCEEEEETT-TEEEEE
T ss_pred ceeEEEcCCCCeEEEEECC--CCeEEEEcCCCCEEEEE-EcCCccCCcccccCCCCeeEECC-CCCEEEEcCC-ceEEEE
Confidence 9999999999999999866 78999999999844333 3110 012467999999996 5789999654 699998
Q ss_pred EcCC
Q psy14257 522 TYDG 525 (841)
Q Consensus 522 ~~dG 525 (841)
..++
T Consensus 250 ~~~~ 253 (255)
T 3qqz_A 250 TPQS 253 (255)
T ss_dssp EC--
T ss_pred EecC
Confidence 7654
No 95
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.15 E-value=4.2e-08 Score=109.08 Aligned_cols=292 Identities=11% Similarity=0.063 Sum_probs=165.6
Q ss_pred cceEEEEecCC----CcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecC-------CCCCeEEEecCCCCCc
Q psy14257 412 GKNLYWVESNL----DQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWD-------SKAPRIERCSMSGEHR 480 (841)
Q Consensus 412 ~~~LY~tD~~~----~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~-------~~~~~I~r~~ldG~~~ 480 (841)
.+.+|+++... +.|.++|+.......-+..+ ..| +|+++|++++||+++.. ...+.|..++..-...
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 37899999865 79999998765443333333 468 99999999999999852 1135788887754332
Q ss_pred EEEEEecccCC--CCCCceeEEEeccCCEEEEEeCC-CCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCC
Q psy14257 481 SVIVRVDLLTS--RGAWPNGLTLDYQLTRIYWIDAK-SDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWR 557 (841)
Q Consensus 481 ~~i~~~~~~~~--~~~~P~glalD~~~~~LYw~d~~-~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~ 557 (841)
..-+....... ....|.++++++++++||+++.. .+.|..+|+....+..-+... .-.++...+.+.|++...
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~----g~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP----DCYHIFPASPTVFYMNCR 237 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----SEEEEEEEETTEEEEEET
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC----CceeeccCCCcEEEEEcC
Confidence 22222100000 13579999999999999999864 789999999865443222211 112233345677777777
Q ss_pred CCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCce
Q psy14257 558 TNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQ 637 (841)
Q Consensus 558 ~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~ 637 (841)
.+++..++..+++...... ..+.....|...+ ..+.+++ ..
T Consensus 238 dG~~~~V~~~~~~v~~~~~----~~~~v~~~p~~~~----------------------------~~~~~dg-------~~ 278 (426)
T 3c75_H 238 DGSLARVDFADGETKVTNT----EVFHTEDELLINH----------------------------PAFSLRS-------GR 278 (426)
T ss_dssp TSSEEEEECCTTCCEEEEC----CCCSCTTSCBCSC----------------------------CEECTTT-------CE
T ss_pred CCCEEEEECCCCcEEEEee----eeeccCCCceeeE----------------------------eeecCCC-------CE
Confidence 7777777664443322111 0000000010000 0011111 12
Q ss_pred eEEeecCCeEEEEecCCCCccccceeecC------CCCCc---eEEEEecCCCEEEEEECC---------CCeEEEEEcc
Q psy14257 638 FIIFSRPREIRGVDLEHPYYHTIPTISIP------QVFSP---NNLNFDAANKKIYWTDQE---------YNEVKRSSIV 699 (841)
Q Consensus 638 ~l~~~~~~~i~~~~l~~~~~~~~~~~~~~------~~~~~---~~v~~d~~~~~iyw~d~~---------~~~I~~~~~~ 699 (841)
+++.+....+..+++..........+++. ....| ..+++++.++++|+++.. .++|..+++.
T Consensus 279 ~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 279 LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 22223333444444432211100001100 00112 237899999999999742 3578888876
Q ss_pred cCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCC-cEEEEecCCCCCeEEEEecCCc-ceEEE
Q psy14257 700 GGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQ-NMFIAVSSPTQSKIVVCNLEGE-YQTTI 777 (841)
Q Consensus 700 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~-~LYw~~~~~~~~~I~v~~l~g~-~~~~~ 777 (841)
...+ ...|-.. ..|.+|+|++.++ .||.++ ...++|.|+++... ..+.+
T Consensus 359 T~kv-------------------------v~~I~vg--~~P~gia~spDg~~~lyv~n--~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 359 TGER-------------------------INKIELG--HEIDSINVSQDAEPLLYALS--AGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TCCE-------------------------EEEEEEE--EEECEEEECCSSSCEEEEEE--TTTTEEEEEETTTCCEEEEE
T ss_pred CCeE-------------------------EEEEECC--CCcCeEEEccCCCEEEEEEc--CCCCeEEEEECCCCCEEEEe
Confidence 5441 1122111 2599999999999 999994 46899999998654 44444
No 96
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.12 E-value=2.9e-09 Score=120.12 Aligned_cols=295 Identities=14% Similarity=0.148 Sum_probs=169.4
Q ss_pred cccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEE--eC------CCCCccceEEeee--
Q psy14257 238 TFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVV--QT------GLSTAEGLAVDWI-- 307 (841)
Q Consensus 238 ~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~--~~------~l~~p~giavD~~-- 307 (841)
...++.++.++..+.+|+|+.. ++ ||+++...++|++++..+|. ...+. .. +...+.|||+++.
T Consensus 16 gf~~~~~a~~l~~P~~~a~~pd-G~--l~V~e~~gg~I~~~~~~~g~---~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~ 89 (454)
T 1cru_A 16 NFDKKVILSNLNKPHALLWGPD-NQ--IWLTERATGKILRVNPESGS---VKTVFQVPEIVNDADGQNGLLGFAFHPDFK 89 (454)
T ss_dssp TSCEEEEECCCSSEEEEEECTT-SC--EEEEETTTCEEEEECTTTCC---EEEEEECTTCCCCTTSSCSEEEEEECTTTT
T ss_pred CeEEEEEECCCCCceEEEEcCC-Cc--EEEEEcCCCEEEEEECCCCc---EeEEecCCccccccCCCCceeEEEECCCcC
Confidence 4567788888999999999876 56 99999877789998765443 22222 11 2344559999975
Q ss_pred -cCceeEEEeeecCCCCCC---CCCCEEEEccCCC-----ccccccc----cCcCCCceEEEEccCCEEEEEeCCCCeEE
Q psy14257 308 -GKNLYMFWAFWSLSPSNS---SDGGIEKAGMHGE-----NRSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVE 374 (841)
Q Consensus 308 -~~~~y~~~td~~~~~~~~---~~~~I~~~~~dG~-----~~~~l~~----~~~~~P~glavD~~~~~lYwaD~~~~~I~ 374 (841)
.+.+|++.+.......+. ...+|.|+..++. ..++++. ...+.+.+|+++++ ++||++-...+...
T Consensus 90 ~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~~~ 168 (454)
T 1cru_A 90 NNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQ 168 (454)
T ss_dssp TSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTS
T ss_pred cCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCCCC
Confidence 556676665421111011 1348999987542 2233332 24577999999986 47999854321100
Q ss_pred EEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCce----------EEEEecCCCC
Q psy14257 375 SVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQF----------RRTLIAGDME 444 (841)
Q Consensus 375 ~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~----------~~~l~~~~l~ 444 (841)
.. ++. .+.. +...+..-...... .+...++|.+++.+|+. ...+...++.
T Consensus 169 ~~--~~~------------~~~~---~~~~p~~~~~~aq~---~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~R 228 (454)
T 1cru_A 169 LA--YLF------------LPNQ---AQHTPTQQELNGKD---YHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHR 228 (454)
T ss_dssp GG--GTT------------SCCC---TTCCCCHHHHHTTC---CTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCS
T ss_pred cc--ccc------------cccc---cccccccccccccC---CCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCC
Confidence 00 000 0000 00000000000000 01235789999999872 2334556889
Q ss_pred CceeEEEcCCCCeEEEEecCCC-CCeEEEecC---------CCC---------------------------C--------
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSK-APRIERCSM---------SGE---------------------------H-------- 479 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~-~~~I~r~~l---------dG~---------------------------~-------- 479 (841)
+|.||++|+ .|.||++|.+.. .-.|.++.. .|. .
T Consensus 229 Np~gla~dp-~G~L~~~d~g~~~~dein~i~~G~nYGWP~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~ 307 (454)
T 1cru_A 229 NPQGLAFTP-NGKLLQSEQGPNSDDEINLIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVT 307 (454)
T ss_dssp EEEEEEECT-TSCEEEEEECSSSCEEEEECCTTCBCCTTTCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEE
T ss_pred CcceEEECC-CCCEEEEecCCCCCeEEEEecCCCCCCCCceecCcccCccccccccccccccccccccCCcccCcccccc
Confidence 999999999 599999997631 112222221 110 0
Q ss_pred ------cE----EEEEe----------c--c-----cCCCCCCceeEEEecc--------CCEEEEEeCCCCeEEEEEcC
Q psy14257 480 ------RS----VIVRV----------D--L-----LTSRGAWPNGLTLDYQ--------LTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 480 ------~~----~i~~~----------~--~-----~~~~~~~P~glalD~~--------~~~LYw~d~~~~~I~~~~~d 524 (841)
+. -+... . . ....-..|.||++... .+.||+++...++|.++.++
T Consensus 308 ~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ap~G~~fy~g~~~~~~~~~g~lfv~~~~~~~i~~v~l~ 387 (454)
T 1cru_A 308 KESEWTGKNFVPPLKTLYTVQDTYNYNDPTCGEMTYICWPTVAPSSAYVYKGGKKAITGWENTLLVPSLKRGVIFRIKLD 387 (454)
T ss_dssp CGGGCCCSSBCCCSEEECCCCTTCCSCCGGGTTCGGGGSSCCCBCCCEECCCCTTCCTTCTTEEEEEBSSSCCEEEEEEC
T ss_pred ccccccCCCcCCCceecccccccccccccccccccccccCccCcceeEEeCCCCccCcccCCcEEEeecCCCEEEEEEEC
Confidence 00 00000 0 0 0001235889998632 37899999999999999998
Q ss_pred C--Cee----EEEEcCCCCCCcceEEEEe-cCe-EEEEeCCCCeEEE
Q psy14257 525 G--KDH----HVVLSNHDSLTHPFAIALF-ENH-VYWTDWRTNSVIR 563 (841)
Q Consensus 525 G--~~~----~~i~~~~~~l~~P~gla~~-~~~-lY~td~~~~~i~~ 563 (841)
+ ... ..++. ...+|..|++. +|. ||+++...+.|++
T Consensus 388 ~~g~~~~~~~~~~~~---~~~R~~dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 388 PTYSTTYDDAVPMFK---SNNRYRDVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp TTSSSEEEEEEEESC---CSSCEEEEEECTTSSCEEEEECSSCCEEC
T ss_pred CCCCeeeeeeeeecc---cCCCceeEEECCCCCEEEEEECCCCCCcc
Confidence 5 212 12222 24589999985 576 9999998888765
No 97
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.12 E-value=6.9e-09 Score=113.37 Aligned_cols=287 Identities=12% Similarity=0.116 Sum_probs=166.5
Q ss_pred eEEEecC----CCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcc
Q psy14257 265 VFWTDVI----DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENR 340 (841)
Q Consensus 265 lyw~d~~----~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~ 340 (841)
||++|.. .+.|++++...+. .. ..+..+. .|. ++++|.++.+|+.-+...........+.|.+++......
T Consensus 47 vyV~~~~~~~~~~~V~ViD~~t~~--v~-~~I~vG~-~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v 121 (386)
T 3sjl_D 47 VYVNDPAHFAAVTQQFVIDGEAGR--VI-GMIDGGF-LPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLP 121 (386)
T ss_dssp EEEEECGGGCSSEEEEEEETTTTE--EE-EEEEECS-SCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred EEEEcCcccCCCCEEEEEECCCCe--EE-EEEECCC-CCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeE
Confidence 9999886 6788888776543 22 2334444 575 999998877777532110000000123578887754332
Q ss_pred -ccccccC------cCCCceEEEEccCCEEEEEeCC-CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc
Q psy14257 341 -SPLVTKN------IQWPSSLVIDYNQDILYWCDSH-LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG 412 (841)
Q Consensus 341 -~~l~~~~------~~~P~glavD~~~~~lYwaD~~-~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~ 412 (841)
..+.... ...|.++++++++++||+++.. .+.|..+++........+.+... .+ +...+
T Consensus 122 ~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~--------~~P~g 188 (386)
T 3sjl_D 122 TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YH--------IFPTA 188 (386)
T ss_dssp EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EE--------EEEEE
T ss_pred EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ce--------eecCC
Confidence 2221111 2479999999999999999975 78999999876554333322100 00 00011
Q ss_pred ceEEEEecCCCcEEEEccC--CceEEEE--ecCCCCCcee--EEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 413 KNLYWVESNLDQIEVAKLS--GQFRRTL--IAGDMESPRA--IALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~--G~~~~~l--~~~~l~~P~g--iavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
.+.|++....+++.+.++. |+...+. ....-..|.. .+++...|.++|... .++|+.+++.+...+++...
T Consensus 189 ~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~---~g~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 189 PDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY---TGKIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp TTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT---TSEEEEEECTTSSCEECCCE
T ss_pred CceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC---CCEEEEEECCCCcceeecce
Confidence 2233333334444444443 2221111 0001123333 366656676666543 46899999987766554321
Q ss_pred cccC----CCCCCcee---EEEeccCCEEEEEeC---------CCCeEEEEEcCCCee-EEEEcCCCCCCcceEEEEe-c
Q psy14257 487 DLLT----SRGAWPNG---LTLDYQLTRIYWIDA---------KSDSIHTVTYDGKDH-HVVLSNHDSLTHPFAIALF-E 548 (841)
Q Consensus 487 ~~~~----~~~~~P~g---lalD~~~~~LYw~d~---------~~~~I~~~~~dG~~~-~~i~~~~~~l~~P~gla~~-~ 548 (841)
.+.. ..-..|.| +++++..++||++.. ..++|..+|+....+ +.+... ..|.+|++. +
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg----~~~~~lavs~D 341 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG----HEIDSINVSQD 341 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE----EEECEEEECSS
T ss_pred eccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC----CCcceEEECCC
Confidence 1000 01112444 888999999999863 236899999976544 333322 367899993 3
Q ss_pred C--eEEEEeCCCCeEEEEeccCCcceEEEe
Q psy14257 549 N--HVYWTDWRTNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 549 ~--~lY~td~~~~~i~~~~~~~g~~~~~i~ 576 (841)
+ +||.+++..+.|..++..+++.+..+.
T Consensus 342 ~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp SSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 3 689999999999999988888666554
No 98
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.12 E-value=7.1e-09 Score=107.41 Aligned_cols=199 Identities=13% Similarity=0.015 Sum_probs=137.0
Q ss_pred CCCceEEEEccCCEEEEEeC--CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEE
Q psy14257 349 QWPSSLVIDYNQDILYWCDS--HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIE 426 (841)
Q Consensus 349 ~~P~glavD~~~~~lYwaD~--~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~ 426 (841)
.+|.||+++.+ ++||++.. ..++|.++++........+.+.. .+. ++.+.+.+++||++.+..+.+.
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~--~~f--------geGi~~~g~~lyv~t~~~~~v~ 89 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDD--SYF--------GEGLTLLNEKLYQVVWLKNIGF 89 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCT--TCC--------EEEEEEETTEEEEEETTCSEEE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCC--Ccc--------eEEEEEeCCEEEEEEecCCEEE
Confidence 36899999976 79999975 47899999997655443332211 111 1234455689999999999999
Q ss_pred EEccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccC
Q psy14257 427 VAKLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQL 505 (841)
Q Consensus 427 v~~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~ 505 (841)
+++.+. +...++-. + .|.|+.+.++.++||+++ + .++|...+.+.......+..+.....+..|++|++. +
T Consensus 90 viD~~t~~v~~~i~~-g--~~~g~glt~Dg~~l~vs~-g--s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~--d 161 (266)
T 2iwa_A 90 IYDRRTLSNIKNFTH-Q--MKDGWGLATDGKILYGSD-G--TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI--N 161 (266)
T ss_dssp EEETTTTEEEEEEEC-C--SSSCCEEEECSSSEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--T
T ss_pred EEECCCCcEEEEEEC-C--CCCeEEEEECCCEEEEEC-C--CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE--C
Confidence 999874 44444432 2 355555666678999998 5 579999998765433333321111245578999987 5
Q ss_pred CEEEEEeCCCCeEEEEEcCCCe-eEEEEcCC----------CCCCcceEEEEe--cCeEEEEeCCCCeEEEEec
Q psy14257 506 TRIYWIDAKSDSIHTVTYDGKD-HHVVLSNH----------DSLTHPFAIALF--ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 506 ~~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~----------~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~ 566 (841)
++||+.....+.|.++|+.... ...+-... .....|.||++. ++++|+|....+.|+.++.
T Consensus 162 g~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp TEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred CEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEE
Confidence 7999999889999999996544 44443211 112467999996 3689999988888887764
No 99
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.11 E-value=8.2e-09 Score=106.96 Aligned_cols=204 Identities=12% Similarity=0.015 Sum_probs=137.6
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccC-CCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH-GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 375 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~ 375 (841)
..|.||++++. +.+|+ +.- ....++|.++++. |+....+.......+.|++++ +++||+++...+.|.+
T Consensus 21 ~f~~Gl~~~~d-g~Lyv--stg-----~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFE--STG-----LYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFI 90 (266)
T ss_dssp CCEEEEEECST-TEEEE--EEC-----STTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEE
T ss_pred CCcccEEEeCC-CeEEE--ECC-----CCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEE
Confidence 36899999864 34444 421 1123589999876 554444433344455677776 6899999999999999
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCce-EEEEecC----CCCCceeEE
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQF-RRTLIAG----DMESPRAIA 450 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~-~~~l~~~----~l~~P~gia 450 (841)
++.+......-+... .+.+ .++.+.+++||+++ +.++|.+++..... .+.+... .+..|++++
T Consensus 91 iD~~t~~v~~~i~~g---~~~g--------~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele 158 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQ---MKDG--------WGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELE 158 (266)
T ss_dssp EETTTTEEEEEEECC---SSSC--------CEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EECCCCcEEEEEECC---CCCe--------EEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEE
Confidence 998744332222221 1222 23445568999999 68899999987643 3333221 244688998
Q ss_pred EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec-cc-------CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 451 LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD-LL-------TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 451 vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~-~~-------~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
+. +|+||.+.|. .+.|.++++........+... +. ......|+|||+|+.+++||++....++|+.++
T Consensus 159 ~~--dg~lyvn~~~--~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 159 YI--NGEVWANIWQ--TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp EE--TTEEEEEETT--SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EE--CCEEEEecCC--CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 87 5899999988 789999999654443444321 10 012357899999999999999999999999998
Q ss_pred cCCC
Q psy14257 523 YDGK 526 (841)
Q Consensus 523 ~dG~ 526 (841)
+...
T Consensus 235 l~~~ 238 (266)
T 2iwa_A 235 LHLV 238 (266)
T ss_dssp EEEC
T ss_pred Eecc
Confidence 7543
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.10 E-value=9.4e-08 Score=110.74 Aligned_cols=335 Identities=9% Similarity=0.053 Sum_probs=204.4
Q ss_pred eEEecc--CccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEe--cCCcccceEEEEeCCCC
Q psy14257 222 FVIFSN--RHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATL--IGNSLSNIDVVVQTGLS 297 (841)
Q Consensus 222 ~ll~s~--~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~--~~~~~~~~~~~~~~~l~ 297 (841)
.+++++ .+.|..++.........+.....+.++.|....+. ||.++.. +.|...++ ..+. ...+ +.. -.
T Consensus 150 ~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~--l~v~~~d-~~V~v~D~~~~t~~--~~~~-i~~-g~ 222 (543)
T 1nir_A 150 LFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRY--LLVIGRD-ARIDMIDLWAKEPT--KVAE-IKI-GI 222 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCE--EEEEETT-SEEEEEETTSSSCE--EEEE-EEC-CS
T ss_pred EEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCE--EEEECCC-CeEEEEECcCCCCc--EEEE-Eec-CC
Confidence 445554 35677777776655444442223667777776555 9998866 89999988 4432 2222 333 34
Q ss_pred CccceEEee----ecCceeEEEeeecCCCCCCCCCCEEEEccCC-CccccccccC----------cCCCceEEEEccCCE
Q psy14257 298 TAEGLAVDW----IGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-ENRSPLVTKN----------IQWPSSLVIDYNQDI 362 (841)
Q Consensus 298 ~p~giavD~----~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~~~~~l~~~~----------~~~P~glavD~~~~~ 362 (841)
.|+++++++ .++.+|+ +.. .++.|..++... +.+..+.... -.++.+|++.+.+++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v--~~~-------~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIA--GAY-------WPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEE--EEE-------ESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred CcceEEeCCCcCCCCCEEEE--EEc-------cCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 799999998 7766655 322 124666665432 2222221111 125778999999999
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCce-EEEEecC
Q psy14257 363 LYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQF-RRTLIAG 441 (841)
Q Consensus 363 lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~-~~~l~~~ 441 (841)
+|++....++|..+++.......+..... .... ..++++..++.||++....+.|.+.++.... ..++-..
T Consensus 294 ~~vs~~~~g~i~vvd~~~~~~l~~~~i~~--~~~~------~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g 365 (543)
T 1nir_A 294 FIVNVKETGKVLLVNYKDIDNLTVTSIGA--APFL------HDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG 365 (543)
T ss_dssp EEEEETTTTEEEEEECTTSSSCEEEEEEC--CSSC------CCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEECCCCeEEEEEecCCCcceeEEecc--CcCc------cCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC
Confidence 99999999999999986543222211111 0111 1124455567799998888999999986543 3333322
Q ss_pred CCCCc-eeEE-EcCCCCeEEEEecCCCCCeEEEecCCCCC-----cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC
Q psy14257 442 DMESP-RAIA-LDPRFGLLFWTDWDSKAPRIERCSMSGEH-----RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK 514 (841)
Q Consensus 442 ~l~~P-~gia-vd~~~g~Ly~td~~~~~~~I~r~~ldG~~-----~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~ 514 (841)
...+| +++. ++|..|.+|.+... ....|...+++... .+++.... ..-..+..+++.+.+++||+....
T Consensus 366 ~~ph~g~g~~~~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~~~~v~~l~---~~g~~~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 366 KTPHPGRGANFVHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYAWKKVAELQ---GQGGGSLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp SSBCCTTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEEE---CSCSCCCCEECCTTCCEEEECCTT
T ss_pred CCCCCCCCcccCCCCCccEEEeccC-CCceEEEEEeCCCCCchhcCeEEEEEE---cCCCCceEEEcCCCCCcEEEecCC
Confidence 22344 3554 47777999988752 15678888776411 22222211 222456779999887888765421
Q ss_pred ------CCeEEEEEcCCCeeE-EEEc--C----CCCCCcceEEEE--ecCeEEEEeC----CCCeEEEEeccCCcceEEE
Q psy14257 515 ------SDSIHTVTYDGKDHH-VVLS--N----HDSLTHPFAIAL--FENHVYWTDW----RTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 515 ------~~~I~~~~~dG~~~~-~i~~--~----~~~l~~P~gla~--~~~~lY~td~----~~~~i~~~~~~~g~~~~~i 575 (841)
.+.|..++.+...+. .++. . .+....+..+++ .+.+||++.| ..+.|..++..+++....+
T Consensus 442 ~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 442 NPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp CSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred CCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 459999998754332 2220 0 111356777777 4678999988 3588999998888877777
Q ss_pred e-cccCCCce
Q psy14257 576 Q-RTLTQPFI 584 (841)
Q Consensus 576 ~-~~~~~p~~ 584 (841)
. ..+..|.|
T Consensus 522 ~~~~~~~p~g 531 (543)
T 1nir_A 522 KDPRLITPTG 531 (543)
T ss_dssp CCTTCCSEEE
T ss_pred cCCCccCCCe
Confidence 5 34566766
No 101
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.10 E-value=4.3e-07 Score=99.85 Aligned_cols=301 Identities=8% Similarity=0.017 Sum_probs=170.0
Q ss_pred ceEEEEec-CCC---cEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecC-------CCCCeEEEecCCCCCcE
Q psy14257 413 KNLYWVES-NLD---QIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWD-------SKAPRIERCSMSGEHRS 481 (841)
Q Consensus 413 ~~LY~tD~-~~~---~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~-------~~~~~I~r~~ldG~~~~ 481 (841)
+.+|++|. ..+ .|.+++++.......+..+ ..| +|+++|++++||+++.. .....|..++.......
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~ 110 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI 110 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE
Confidence 77999997 554 7888888643332223333 468 99999999999999842 12456888877522221
Q ss_pred EEEEec--ccCCCCCCceeEEEeccCCEEEEEeCC-CCeEEEEEcCCCeeEEE-EcCCCCCCcceEEEE--ecCeEEEEe
Q psy14257 482 VIVRVD--LLTSRGAWPNGLTLDYQLTRIYWIDAK-SDSIHTVTYDGKDHHVV-LSNHDSLTHPFAIAL--FENHVYWTD 555 (841)
Q Consensus 482 ~i~~~~--~~~~~~~~P~glalD~~~~~LYw~d~~-~~~I~~~~~dG~~~~~i-~~~~~~l~~P~gla~--~~~~lY~td 555 (841)
..+... ........|.++++++++++||++... .+.|..+| +....... + ..|..+.+ .+.+.|++.
T Consensus 111 ~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i------~~~~~~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 111 ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLL------SSPTCYHIHPGAPSTFYLL 183 (373)
T ss_pred EEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEc------CCCceEEEEeCCCceEEEE
Confidence 111110 000012579999999999999999865 68899999 65433211 2 22223333 456789999
Q ss_pred CCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccC
Q psy14257 556 WRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVAD 635 (841)
Q Consensus 556 ~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~ 635 (841)
+..+++..++. +|+....+......+ + ..|...+| ....++
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~-~--~~p~~~~~----------------------------~~~~~~------- 224 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLT-A--AQNLLTQP----------------------------AQANKS------- 224 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEecccccc-C--Ccceeecc----------------------------eeEecC-------
Confidence 88899888887 666543221000000 0 00000000 000110
Q ss_pred ceeEEeecCCeEEEEecCCCCccccceeec------CCCCC---ceEEEEecCCCEEEEEEC---------CCCeEEEEE
Q psy14257 636 SQFIIFSRPREIRGVDLEHPYYHTIPTISI------PQVFS---PNNLNFDAANKKIYWTDQ---------EYNEVKRSS 697 (841)
Q Consensus 636 ~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~------~~~~~---~~~v~~d~~~~~iyw~d~---------~~~~I~~~~ 697 (841)
..+++++....+..+++..........+++ ..... ...+++++.++++|++.. ..++|..++
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 112222333344444443221110001110 00011 233788999999999864 235788888
Q ss_pred cccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCC-cEEEEecCCCCCeEEEEecCCc-ceE
Q psy14257 698 IVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQ-NMFIAVSSPTQSKIVVCNLEGE-YQT 775 (841)
Q Consensus 698 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~-~LYw~~~~~~~~~I~v~~l~g~-~~~ 775 (841)
+....+ ...| . .-..|.+|++++.++ .||.+ ....++|.|+++... ..+
T Consensus 305 ~~t~~v-------------------------v~~i-~-~g~~p~~i~~s~Dg~~~l~v~--~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 305 GLVGQT-------------------------SSQI-S-LGHDVDAISVAQDGGPDLYAL--SAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCCCEE-------------------------EEEE-E-CCCCcCeEEECCCCCeEEEEE--cCCCCeEEEEECCCCCEEe
Confidence 765440 1233 2 123699999999999 78888 445789999998754 444
Q ss_pred EEEcCCCCCCCcCCCceEEEEe
Q psy14257 776 TILSNESNDTSTLSKISSIAVW 797 (841)
Q Consensus 776 ~~~~~~~~~~~~l~~p~~iavd 797 (841)
.++.- -..|.+|.+.
T Consensus 356 ~i~~v-------G~~P~~~~~~ 370 (373)
T 2mad_H 356 STVEL-------GSGPQVLSVM 370 (373)
T ss_pred eecCC-------CCCCcEEEEc
Confidence 43432 2578888763
No 102
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.09 E-value=2.1e-07 Score=101.58 Aligned_cols=310 Identities=10% Similarity=0.079 Sum_probs=173.8
Q ss_pred ccccceEEEEecC----CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecC-------CCCCeEEEecCCC
Q psy14257 409 LWIGKNLYWVESN----LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWD-------SKAPRIERCSMSG 477 (841)
Q Consensus 409 dw~~~~LY~tD~~----~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~-------~~~~~I~r~~ldG 477 (841)
.+.++.||++|.. .++|.+++.+.......+..+ ..|. |+++|+..+||++++. .....|...+...
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 3456899999986 679999998754433333333 4585 9999999999999842 1135688887764
Q ss_pred CCcEEEEEecccC--CCCCCceeEEEeccCCEEEEEeCC-CCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEE
Q psy14257 478 EHRSVIVRVDLLT--SRGAWPNGLTLDYQLTRIYWIDAK-SDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWT 554 (841)
Q Consensus 478 ~~~~~i~~~~~~~--~~~~~P~glalD~~~~~LYw~d~~-~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~t 554 (841)
.....-+...... .....|.++++++++++||+++.. .+.|..+|+....+..-+.. ....++.-.+.+.|++
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v----~g~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV----PDCYHIFPTAPDTFFM 194 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC----CSEEEEEEEETTEEEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC----CCcceeecCCCceeEE
Confidence 3322222210000 013479999999999999999864 68999999987654332221 1112232233444445
Q ss_pred eCCCCeEEEEeccC-CcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccc
Q psy14257 555 DWRTNSVIRANKWN-GSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633 (841)
Q Consensus 555 d~~~~~i~~~~~~~-g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~ 633 (841)
....+++..++..+ ++.. . .. ..++..-..|...|+ .+..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~-~-~~--~~~~~~~~~~~~~~~----------------------------~~~~------- 235 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPE-I-TH--TEVFHPEDEFLINHP----------------------------AYSQ------- 235 (386)
T ss_dssp EETTSCEEEEECCSSSCCE-E-EE--CCCCSCTTSCBCSCC----------------------------EEET-------
T ss_pred ECCCCCEEEEECCCCCeEE-E-ee--cceeccccccccccc----------------------------eeEc-------
Confidence 44455555554432 2221 1 10 001000000100000 0110
Q ss_pred cCceeEEeecCCeEEEEecCCCCccccceeec-------CC--CCCceEEEEecCCCEEEEEECC---------CCeEEE
Q psy14257 634 ADSQFIIFSRPREIRGVDLEHPYYHTIPTISI-------PQ--VFSPNNLNFDAANKKIYWTDQE---------YNEVKR 695 (841)
Q Consensus 634 ~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~-------~~--~~~~~~v~~d~~~~~iyw~d~~---------~~~I~~ 695 (841)
....+++++....++.+++..........+.+ .. ......+++++..+++|++... .++|..
T Consensus 236 ~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 236 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 11223445555566666665433221111110 00 0112347779999999998631 357888
Q ss_pred EEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCC-cEEEEecCCCCCeEEEEecCCcce
Q psy14257 696 SSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQ-NMFIAVSSPTQSKIVVCNLEGEYQ 774 (841)
Q Consensus 696 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~-~LYw~~~~~~~~~I~v~~l~g~~~ 774 (841)
+++....+ ...|... ..|.+|||+..++ .||.++ ...+.|.|++......
T Consensus 316 iD~~t~kv-------------------------~~~i~vg--~~~~~lavs~D~~~~ly~tn--~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 316 LDAKTGER-------------------------LAKFEMG--HEIDSINVSQDEKPLLYALS--TGDKTLYIHDAESGEE 366 (386)
T ss_dssp EETTTCCE-------------------------EEEEEEE--EEECEEEECSSSSCEEEEEE--TTTTEEEEEETTTCCE
T ss_pred EECCCCeE-------------------------EEEEECC--CCcceEEECCCCCeEEEEEc--CCCCeEEEEECCCCcE
Confidence 88866551 1122111 2588999999987 789884 5688999998864333
Q ss_pred EEEEcCCCCCCCcCCCceEEEEeCC
Q psy14257 775 TTILSNESNDTSTLSKISSIAVWPV 799 (841)
Q Consensus 775 ~~~~~~~~~~~~~l~~p~~iavd~~ 799 (841)
..-+.. ..+|..|++.+.
T Consensus 367 ~~~i~~-------~~~p~~l~~s~d 384 (386)
T 3sjl_D 367 LRSVNQ-------LGHGPQVITTAD 384 (386)
T ss_dssp EEEECC-------CCSSCCEEEECC
T ss_pred EEEecC-------CCCCceeEECCc
Confidence 222333 578998888765
No 103
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.09 E-value=6.7e-09 Score=109.71 Aligned_cols=208 Identities=12% Similarity=0.059 Sum_probs=136.3
Q ss_pred CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc----ccceEEE-Eec-
Q psy14257 347 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW----IGKNLYW-VES- 420 (841)
Q Consensus 347 ~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw----~~~~LY~-tD~- 420 (841)
.-..|+++++|..++++|+++...++|.++++++...+.+ ....+.++ |-+...+..+.| -.++|++ ++.
T Consensus 11 ~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~---g~~~~~~sGl~~~~~D~~grL~vv~~~~ 86 (334)
T 2p9w_A 11 KNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSN---GDGEQQMSGLSLLTHDNSKRLFAVMKNA 86 (334)
T ss_dssp TTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCS---SCCSEEEEEEEESSSSSCCEEEEEEEET
T ss_pred cccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCcccc---CCCcceeeEEEEeccCCCCcEEEEEccc
Confidence 3457999999999999999999999999999986655444 22111100 000000112222 2377887 552
Q ss_pred -----------CCCcEEEEccC----CceEEEE-ec----C-------CCCCceeEEEcCCCCeEEEEecCCCC-CeEEE
Q psy14257 421 -----------NLDQIEVAKLS----GQFRRTL-IA----G-------DMESPRAIALDPRFGLLFWTDWDSKA-PRIER 472 (841)
Q Consensus 421 -----------~~~~I~v~~~~----G~~~~~l-~~----~-------~l~~P~giavd~~~g~Ly~td~~~~~-~~I~r 472 (841)
+...+.+++++ |+....+ +. + ....|++||+|+. |..|+++.. . +.|+|
T Consensus 87 ~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~-GnaYVt~s~--~~~~I~r 163 (334)
T 2p9w_A 87 KSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD-GNSYVAFAL--GMPAIAR 163 (334)
T ss_dssp TTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT-SCEEEEEEE--SSCEEEE
T ss_pred ccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC-CCEEEeCCC--CCCeEEE
Confidence 34678899988 5443222 11 1 2235899999975 999999976 6 89999
Q ss_pred ecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEE-Ec--C-CCCCCcceEE-EE-
Q psy14257 473 CSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVV-LS--N-HDSLTHPFAI-AL- 546 (841)
Q Consensus 473 ~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i-~~--~-~~~l~~P~gl-a~- 546 (841)
++.||+....+............|+||++++.+..|++++. .++|.++++....+..+ .. + ...+..|.+| ++
T Consensus 164 V~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 164 VSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp ECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEE
T ss_pred EeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCcccccccc
Confidence 99999965555431100123345889999998899999999 89999999984322012 11 1 1246778896 55
Q ss_pred ecCeE-EEEeCCCCeEE
Q psy14257 547 FENHV-YWTDWRTNSVI 562 (841)
Q Consensus 547 ~~~~l-Y~td~~~~~i~ 562 (841)
.+|.+ |+++...+.+.
T Consensus 243 ~~G~vllV~~~~~~~~~ 259 (334)
T 2p9w_A 243 VGNESVLVGARAPYAIS 259 (334)
T ss_dssp ETTEEEEEEEETTEEEE
T ss_pred cCCEEEEEEcCCCCEEE
Confidence 57776 99987655443
No 104
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.09 E-value=3.1e-11 Score=102.95 Aligned_cols=80 Identities=29% Similarity=0.624 Sum_probs=69.2
Q ss_pred ccccccCCCC-CCCcccCCCCcEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEee--cCCeeecCCC
Q psy14257 132 DEKQCLRSDC-HHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTC--HAGYELEPDM 208 (841)
Q Consensus 132 ~eC~~~~~~C-~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C--~~G~~l~~d~ 208 (841)
+||...+..| .+.|.+++++|+|.|++||.+.++++.|++++||. .++|.+.|.++ .++|+|.| ..||.+..+.
T Consensus 4 deC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~-~~~C~~~C~n~--~g~y~C~C~g~~G~~~~~~~ 80 (87)
T 1z6c_A 4 DECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS-ENMCAQLCVNY--PGGYTCYCDGKKGFKLAQDQ 80 (87)
T ss_dssp CSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH-HSCCSSEECCC--SSSCCEECCSSSCCBCCTTS
T ss_pred ccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC-CCCCCCEEEcc--CCCEEEECCCCcCCcccCCC
Confidence 4676555557 45899999999999999999988999999999995 46799999999 99999999 6899998888
Q ss_pred CceEeC
Q psy14257 209 FTCKSK 214 (841)
Q Consensus 209 ~~C~~~ 214 (841)
..|.++
T Consensus 81 ~~C~di 86 (87)
T 1z6c_A 81 KSCEVV 86 (87)
T ss_dssp SSCBCC
T ss_pred CcceEC
Confidence 888765
No 105
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.07 E-value=1.5e-07 Score=103.04 Aligned_cols=305 Identities=12% Similarity=0.039 Sum_probs=166.6
Q ss_pred cceEEEEecC-----CCcEEEEccC-CceEEEEecCCCCCceeEEEcCCCCeEEEEec-------CCCCCeEEEecCCCC
Q psy14257 412 GKNLYWVESN-----LDQIEVAKLS-GQFRRTLIAGDMESPRAIALDPRFGLLFWTDW-------DSKAPRIERCSMSGE 478 (841)
Q Consensus 412 ~~~LY~tD~~-----~~~I~v~~~~-G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~-------~~~~~~I~r~~ldG~ 478 (841)
.+.+|+++.. .+.|.+++.. |+...++- .+ ..| +|+++|++++||+++. +.....|...++...
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~-~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVP-TA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEE-CC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEec-CC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 3789999864 3578888865 44444433 23 468 9999999999999974 111346888877532
Q ss_pred Cc-EEEEEecccCCCCCCceeEEEeccCCEEEEEeCC-CCeEEEEEcCCCeeEEE-EcCCCCCCcceEEEEe--cCeEEE
Q psy14257 479 HR-SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK-SDSIHTVTYDGKDHHVV-LSNHDSLTHPFAIALF--ENHVYW 553 (841)
Q Consensus 479 ~~-~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~-~~~I~~~~~dG~~~~~i-~~~~~~l~~P~gla~~--~~~lY~ 553 (841)
.. ..+............|.+|++++++++||+++.. .+.|..++++....... +. .....++.++ +...|+
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~----~~~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA----AAGCWSVIPQPNRPRSFM 167 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG----GTTEEEEEECTTSSSEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec----CCCcceeEEcCCCCeeEE
Confidence 22 2221100000123579999999999999999875 68999999986533222 21 1122233332 234555
Q ss_pred EeCCCCeEEEEeccC-CcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 554 TDWRTNSVIRANKWN-GSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 554 td~~~~~i~~~~~~~-g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
+....+++..+.... |+....... ... ++ ....|-.. ...+++
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~--~~~--~~---~~~~~~~~-------------------------~~~~~g---- 211 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRS--KQM--FS---VKDDPIFI-------------------------APALDK---- 211 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEEC--CCC--SC---TTTSCBCS-------------------------CCEECS----
T ss_pred EECCCCcEEEEEECCCCcEeeeccc--cce--Ec---CCCCceEE-------------------------EecccC----
Confidence 555555555444322 322211110 000 00 00000000 001111
Q ss_pred ccCceeEEeecCCeEEEEecCCCCccccceeecCC------C---CCceEEEEecCCCEEEEEEC----------CCCeE
Q psy14257 633 VADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQ------V---FSPNNLNFDAANKKIYWTDQ----------EYNEV 693 (841)
Q Consensus 633 ~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~------~---~~~~~v~~d~~~~~iyw~d~----------~~~~I 693 (841)
...++++....+..+++..........+++.. . ..+..++|++..+++|++.. ..++|
T Consensus 212 ---~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v 288 (361)
T 2oiz_A 212 ---DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEI 288 (361)
T ss_dssp ---SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEE
T ss_pred ---CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceE
Confidence 11222333344555554322111111111000 0 11223789999999999864 13578
Q ss_pred EEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc-
Q psy14257 694 KRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE- 772 (841)
Q Consensus 694 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~- 772 (841)
..+++.... ...-+..+- |.+|||++.++.||.+ +. ++|.++++...
T Consensus 289 ~viD~~t~~--------------------------~v~~i~~~~--p~~ia~spdg~~l~v~--n~--~~v~v~D~~t~~ 336 (361)
T 2oiz_A 289 WVMDTKTKQ--------------------------RVARIPGRD--ALSMTIDQQRNLMLTL--DG--GNVNVYDISQPE 336 (361)
T ss_dssp EEEETTTTE--------------------------EEEEEECTT--CCEEEEETTTTEEEEE--CS--SCEEEEECSSSS
T ss_pred EEEECCCCc--------------------------EEEEEecCC--eeEEEECCCCCEEEEe--CC--CeEEEEECCCCc
Confidence 888876544 111222232 9999999999999999 32 89999987654
Q ss_pred -c-eEEEEcCCCCCCCcCCCceEEEEeCCCC
Q psy14257 773 -Y-QTTILSNESNDTSTLSKISSIAVWPVKG 801 (841)
Q Consensus 773 -~-~~~~~~~~~~~~~~l~~p~~iavd~~~g 801 (841)
. .+.+... -..|++|+++|..+
T Consensus 337 l~~~~~i~~~-------G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 337 PKLLRTIEGA-------AEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEEETTS-------CSSEEEEEECCCSC
T ss_pred ceeeEEeccC-------CCCcEEEEecCCCC
Confidence 2 2333232 36999999999754
No 106
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.06 E-value=6.6e-11 Score=100.71 Aligned_cols=78 Identities=28% Similarity=0.644 Sum_probs=65.8
Q ss_pred ccccccCCCCCC-CcccCCCCcEEecCCCceec-CCCCccccccccC-CCCCcc-CceeecCCCCceEEeecCCeeecCC
Q psy14257 132 DEKQCLRSDCHH-DCYNTPEGFMCVCPRDMYLQ-PDLITCSYLHPCE-AWGTCS-QDCEPSVSNNSYKCTCHAGYELEPD 207 (841)
Q Consensus 132 ~eC~~~~~~C~~-~C~~~~g~~~C~C~~Gy~l~-~d~~~C~~~~eC~-~~~~Cs-~~C~~~~~~g~~~C~C~~G~~l~~d 207 (841)
+||...+..|.+ .|.|++++|+|.|++||.+. .+++.|++++||. .+..|. +.|.++ .++|+|.|++||.+..+
T Consensus 4 deC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~--~g~y~C~C~~G~~~~~~ 81 (86)
T 1lmj_A 4 DECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNT--EGSYRCECPPGHQLSPN 81 (86)
T ss_dssp CTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEE--TTEEEEESCTTSCCCSS
T ss_pred ccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcC--CCCEEEECcCCcccCCC
Confidence 567655566864 89999999999999999875 3588999999996 445675 589999 99999999999999888
Q ss_pred CCce
Q psy14257 208 MFTC 211 (841)
Q Consensus 208 ~~~C 211 (841)
+++|
T Consensus 82 ~~~C 85 (86)
T 1lmj_A 82 ISAC 85 (86)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 8876
No 107
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.05 E-value=7.5e-08 Score=103.09 Aligned_cols=270 Identities=8% Similarity=-0.036 Sum_probs=163.0
Q ss_pred CccccccccccccEEEEecccc---ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCC-----CCc
Q psy14257 228 RHELRGVDLRTFNVIALISSLK---NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGL-----STA 299 (841)
Q Consensus 228 ~~~I~~~~~~~~~~~~l~~~~~---~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l-----~~p 299 (841)
...|+.+++........+.... .+..+.|....+. ||+++...+.|.+.++.++. .... +..+. ..|
T Consensus 10 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~--l~v~~~~~~~v~~~d~~~~~--~~~~-~~~~~~~~~~~~~ 84 (337)
T 1pby_B 10 PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRI--AYATVNKSESLVKIDLVTGE--TLGR-IDLSTPEERVKSL 84 (337)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSE--EEEEETTTTEEEEEETTTCC--EEEE-EECCBTTEEEECT
T ss_pred CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCE--EEEEeCCCCeEEEEECCCCC--eEee-EEcCCcccccccc
Confidence 4566667776654433333222 4667777765444 99999888999999887654 2222 22211 168
Q ss_pred cceEEeeecCceeEEEeeecCCCCCC--CCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEE
Q psy14257 300 EGLAVDWIGKNLYMFWAFWSLSPSNS--SDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 377 (841)
Q Consensus 300 ~giavD~~~~~~y~~~td~~~~~~~~--~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ 377 (841)
.++++++.++.+|+.-...+..+... .++.|..+++++......+.. -..|.++++++++++||++ .+.|..++
T Consensus 85 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d 160 (337)
T 1pby_B 85 FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMD 160 (337)
T ss_dssp TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEE
T ss_pred cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEE
Confidence 89999987655554321110000001 246899998875433322222 3468999999999999999 47799999
Q ss_pred ecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC-----------------------cEEEEccCCce
Q psy14257 378 VDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD-----------------------QIEVAKLSGQF 434 (841)
Q Consensus 378 ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~-----------------------~I~v~~~~G~~ 434 (841)
+.+......+..... +. +.++...+..||++....+ .|.++++....
T Consensus 161 ~~~~~~~~~~~~~~~--~~--------~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~ 230 (337)
T 1pby_B 161 PEAGTLVEDKPIQSW--EA--------ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE 230 (337)
T ss_dssp TTTTEEEEEECSTTT--TT--------TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC
T ss_pred CCCCcEeeeeecccc--CC--------CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC
Confidence 876554332221110 01 1122222333444332222 46677776543
Q ss_pred EEEE-ecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC
Q psy14257 435 RRTL-IAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA 513 (841)
Q Consensus 435 ~~~l-~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~ 513 (841)
...+ .......|.+++++|...+||.++ ..|...+++.......+. .-..|.++++++.+++||++ .
T Consensus 231 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-----~~v~~~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~-~ 298 (337)
T 1pby_B 231 MAMREVRIMDVFYFSTAVNPAKTRAFGAY-----NVLESFDLEKNASIKRVP------LPHSYYSVNVSTDGSTVWLG-G 298 (337)
T ss_dssp EEEEEEEECSSCEEEEEECTTSSEEEEEE-----SEEEEEETTTTEEEEEEE------CSSCCCEEEECTTSCEEEEE-S
T ss_pred ceEeecCCCCCceeeEEECCCCCEEEEeC-----CeEEEEECCCCcCcceec------CCCceeeEEECCCCCEEEEE-c
Confidence 3221 222335789999999988999883 578888886543333333 23568999999888889988 4
Q ss_pred CCCeEEEEEcCCCee
Q psy14257 514 KSDSIHTVTYDGKDH 528 (841)
Q Consensus 514 ~~~~I~~~~~dG~~~ 528 (841)
..+.|..+++.....
T Consensus 299 ~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 299 ALGDLAAYDAETLEK 313 (337)
T ss_dssp BSSEEEEEETTTCCE
T ss_pred CCCcEEEEECcCCcE
Confidence 478999999875443
No 108
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.05 E-value=5.8e-07 Score=96.06 Aligned_cols=277 Identities=8% Similarity=-0.005 Sum_probs=165.4
Q ss_pred eEEEEecCCCcEEEEccCCc-eEEEEecCCCC-CceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 414 NLYWVESNLDQIEVAKLSGQ-FRRTLIAGDME-SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~-~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
.++++....+.|.+.++... ....+...... .|.+++++|.+++||++... .+.|...++........+.. .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~--~~~v~~~d~~~~~~~~~~~~----~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLVKIDLVTGETLGRIDL----S 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT--TTEEEEEETTTCCEEEEEEC----C
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC--CCeEEEEECCCCCeEeeEEc----C
Confidence 35666667788888887643 33333322211 59999999998899999876 67899999865443333331 1
Q ss_pred C----CCCceeEEEeccCCEEEEEeC-----------CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEE
Q psy14257 492 R----GAWPNGLTLDYQLTRIYWIDA-----------KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWT 554 (841)
Q Consensus 492 ~----~~~P~glalD~~~~~LYw~d~-----------~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~t 554 (841)
. ...|.++++++.+++||+++. ..+.|..+++++......+... ..|.++++. +.+||++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---RQITMLAWARDGSKLYGL 152 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---SSCCCEEECTTSSCEEEE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---CCcceeEECCCCCEEEEe
Confidence 1 126889999988889999962 2579999999876544333332 357788874 4569998
Q ss_pred eCCCCeEEEEeccCCcceEEEeccc-CCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccc
Q psy14257 555 DWRTNSVIRANKWNGSDVTLIQRTL-TQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633 (841)
Q Consensus 555 d~~~~~i~~~~~~~g~~~~~i~~~~-~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~ 633 (841)
++.|..++..+++....+.... ..|.. ..+.+ ..|.....
T Consensus 153 ---~~~i~~~d~~~~~~~~~~~~~~~~~~~~-----------------------~s~dg---------~~l~~~~~---- 193 (337)
T 1pby_B 153 ---GRDLHVMDPEAGTLVEDKPIQSWEAETY-----------------------AQPDV---------LAVWNQHE---- 193 (337)
T ss_dssp ---SSSEEEEETTTTEEEEEECSTTTTTTTB-----------------------CCCBC---------CCCCCCCT----
T ss_pred ---CCeEEEEECCCCcEeeeeeccccCCCce-----------------------eCCCc---------cEEeeecc----
Confidence 4678888877665443332110 00100 00111 11100000
Q ss_pred cCce----eEEe----------ecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcc
Q psy14257 634 ADSQ----FIIF----------SRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIV 699 (841)
Q Consensus 634 ~~~~----~l~~----------~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~ 699 (841)
.... +... .....|+.+++........... .....+.+++|++..+.||.++ +.|+.+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~---~~v~~~d~~ 268 (337)
T 1pby_B 194 SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR--IMDVFYFSTAVNPAKTRAFGAY---NVLESFDLE 268 (337)
T ss_dssp TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE--ECSSCEEEEEECTTSSEEEEEE---SEEEEEETT
T ss_pred CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC--CCCCceeeEEECCCCCEEEEeC---CeEEEEECC
Confidence 0000 0000 0011455566544322211111 1124577899999999999984 789999887
Q ss_pred cCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcc
Q psy14257 700 GGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEY 773 (841)
Q Consensus 700 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~ 773 (841)
+.. ....+. .-..|.++++++.++.||.+ . ..+.|.++++....
T Consensus 269 ~~~--------------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~--~-~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 269 KNA--------------------------SIKRVP-LPHSYYSVNVSTDGSTVWLG--G-ALGDLAAYDAETLE 312 (337)
T ss_dssp TTE--------------------------EEEEEE-CSSCCCEEEECTTSCEEEEE--S-BSSEEEEEETTTCC
T ss_pred CCc--------------------------Ccceec-CCCceeeEEECCCCCEEEEE--c-CCCcEEEEECcCCc
Confidence 644 212222 22468999999999999998 2 36889999987543
No 109
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.02 E-value=8.9e-08 Score=104.94 Aligned_cols=295 Identities=11% Similarity=0.070 Sum_probs=166.5
Q ss_pred eEEEecC-----CCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC-C
Q psy14257 265 VFWTDVI-----DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-E 338 (841)
Q Consensus 265 lyw~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~ 338 (841)
+|.+|.. .+.|++++...+.+ ...+..+ ..| ++++++.++.+|+.-...........++.|..++... +
T Consensus 18 ~yv~~~~~~~~~d~~v~v~D~~t~~~---~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 18 IYVMDSVFMHLTESRVHVYDYTNGKF---LGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp EEEEECCGGGGGGCEEEEEETTTCCE---EEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred EEEECCCCCccccCeEEEEECCCCeE---EEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 7777643 35667776554431 1223333 367 9999998877776432111100001134588887653 2
Q ss_pred cccccccc-----CcCCCceEEEEccCCEEEEEeCC-CCeEEEEEecCCccEEEEe-eeeecCCCccccCCCCCCccccc
Q psy14257 339 NRSPLVTK-----NIQWPSSLVIDYNQDILYWCDSH-LNTVESVRVDGSERTVSFN-LEVLGSDSRVGIPNCRPEDNLWI 411 (841)
Q Consensus 339 ~~~~l~~~-----~~~~P~glavD~~~~~lYwaD~~-~~~I~~~~ldG~~~~~~~~-~~~~~~~~~~~i~~~~~~avdw~ 411 (841)
....+... .-..|.+|++++++++||++... .++|..++++... ++.. +.. ....+ ..+...
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~--~~~~~i~~---~~~~~------v~~~p~ 161 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGD--YVEDVTAA---AGCWS------VIPQPN 161 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTE--EEEEEGGG---TTEEE------EEECTT
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCc--EEEEEecC---CCcce------eEEcCC
Confidence 22222211 13579999999999999999975 7899999887553 2222 111 00000 001111
Q ss_pred cceEEEEecCCCcEEEEccC--CceEEEEe----cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEE
Q psy14257 412 GKNLYWVESNLDQIEVAKLS--GQFRRTLI----AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVR 485 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~--G~~~~~l~----~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~ 485 (841)
++..|++-...+++..++++ |+...... ...-..|..++..+....+++... .++|+.+++.+.....+..
T Consensus 162 ~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~---~~~v~v~d~~~~~~~~~~~ 238 (361)
T 2oiz_A 162 RPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSY---YGNVYSADFSGDEVKVDGP 238 (361)
T ss_dssp SSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBT---TSEEEEEECSSSSCEEEEE
T ss_pred CCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeC---CCeEEEEEecCCCceeccc
Confidence 23456665556666665553 43321111 111134555555555556666653 3578888887655444332
Q ss_pred ecccC----CCCCCcee---EEEeccCCEEEEEeC----------CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-
Q psy14257 486 VDLLT----SRGAWPNG---LTLDYQLTRIYWIDA----------KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF- 547 (841)
Q Consensus 486 ~~~~~----~~~~~P~g---lalD~~~~~LYw~d~----------~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~- 547 (841)
..... .....|.| +++++.+++||++.. ..+.|..+|+....+..-+... . |.+|++.
T Consensus 239 ~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~---~-p~~ia~sp 314 (361)
T 2oiz_A 239 WSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR---D-ALSMTIDQ 314 (361)
T ss_dssp EESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT---T-CCEEEEET
T ss_pred ccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC---C-eeEEEECC
Confidence 11000 01113555 999998999999864 1358999998765443333332 2 9999994
Q ss_pred -cCeEEEEeCCCCeEEEEeccCC--cceEEEecccCCCce
Q psy14257 548 -ENHVYWTDWRTNSVIRANKWNG--SDVTLIQRTLTQPFI 584 (841)
Q Consensus 548 -~~~lY~td~~~~~i~~~~~~~g--~~~~~i~~~~~~p~~ 584 (841)
+.+||.+.+ +.|..++..++ +.+..+...-..|.+
T Consensus 315 dg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~ 352 (361)
T 2oiz_A 315 QRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQ 352 (361)
T ss_dssp TTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEE
T ss_pred CCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEE
Confidence 568999986 88988998887 655544332334443
No 110
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.02 E-value=8.3e-08 Score=103.81 Aligned_cols=190 Identities=12% Similarity=0.099 Sum_probs=113.4
Q ss_pred CCCeEEEEEecCCcccceEEEEeC-----CCCCccceEEeee-cCceeEEEeeecCCCCCCCCCCEEE--EccCCCcccc
Q psy14257 271 IDDKIYNATLIGNSLSNIDVVVQT-----GLSTAEGLAVDWI-GKNLYMFWAFWSLSPSNSSDGGIEK--AGMHGENRSP 342 (841)
Q Consensus 271 ~~~~I~~~~~~~~~~~~~~~~~~~-----~l~~p~giavD~~-~~~~y~~~td~~~~~~~~~~~~I~~--~~~dG~~~~~ 342 (841)
..|+|++++++.......+..+.. ..-.|.||.+... .+.+|+|..+-+. ...+|+. .+.++.....
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-----~~s~ielf~~d~~~~~~~~ 155 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-----SSSTVEVFKFQEEEKSLLH 155 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-----TCCEEEEEEEETTTTEEEE
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-----CCCeEEEEEEECCCCEEEE
Confidence 466777777653211122222221 1238999999763 3467888876541 2335555 4455443322
Q ss_pred c---cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEe
Q psy14257 343 L---VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVE 419 (841)
Q Consensus 343 l---~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD 419 (841)
+ -...+..|+.+++|.+ +.+|+++.. |++|
T Consensus 156 ~~~~~g~~~~~pND~~v~~~-G~fyvt~~~----------------------------------------------~ftd 188 (355)
T 3sre_A 156 LKTIRHKLLPSVNDIVAVGP-EHFYATNDH----------------------------------------------YFID 188 (355)
T ss_dssp EEEECCTTCSSEEEEEEEET-TEEEEEESC----------------------------------------------SCSS
T ss_pred EeccccCCCCCCceEEEeCC-CCEEecCCc----------------------------------------------EeCC
Confidence 2 1237889999999975 677777532 1111
Q ss_pred -----------cCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc----EEEE
Q psy14257 420 -----------SNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR----SVIV 484 (841)
Q Consensus 420 -----------~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~----~~i~ 484 (841)
...++|++++. ++ .++ +.+++..|+|||++|++.+||++|.. ..+|+++++++... +++
T Consensus 189 ~~~~~~e~~~~~~~g~vyr~d~-~~-~~~-~~~~l~~pNGia~spDg~~lYvadt~--~~~I~~~~~~~~g~l~~~~~~- 262 (355)
T 3sre_A 189 PYLKSWEMHLGLAWSFVTYYSP-ND-VRV-VAEGFDFANGINISPDGKYVYIAELL--AHKIHVYEKHANWTLTPLRVL- 262 (355)
T ss_dssp HHHHHHHHHTTCCCEEEEEECT-TC-CEE-EEEEESSEEEEEECTTSSEEEEEEGG--GTEEEEEEECTTSCEEEEEEE-
T ss_pred cccccchhhccCCccEEEEEEC-Ce-EEE-eecCCcccCcceECCCCCEEEEEeCC--CCeEEEEEECCCCcEecCEEE-
Confidence 11234444444 22 223 34568899999999998999999987 78999999874332 222
Q ss_pred EecccCCCCCCceeEEEeccCCEEEEEe-CCCCeEEEEEcC
Q psy14257 485 RVDLLTSRGAWPNGLTLDYQLTRIYWID-AKSDSIHTVTYD 524 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~~~~~LYw~d-~~~~~I~~~~~d 524 (841)
. ....|.||++|.++++||++. ....+|.+++++
T Consensus 263 ~------~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 263 S------FDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp E------CSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred e------CCCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 3 136799999995458999965 333334433333
No 111
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.01 E-value=1.7e-10 Score=108.70 Aligned_cols=106 Identities=25% Similarity=0.578 Sum_probs=85.0
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCC---------ccc---ccccccC-CCCC--CCcccCCCCcEEecCCCceecCC
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDE---------MFC---DEKQCLR-SDCH--HDCYNTPEGFMCVCPRDMYLQPD 165 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de---------~~C---~eC~~~~-~~C~--~~C~~~~g~~~C~C~~Gy~l~~d 165 (841)
.|.+. +.|++. +.| .|..||.+ ..| +||.... ..|. +.|++++++|+|.|++||.+...
T Consensus 8 ~C~~~-~~C~~~-~~C----~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 81 (143)
T 2bou_A 8 WCPQD-SSCVNA-TAC----RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSG 81 (143)
T ss_dssp TCCTT-EEESSS-SCE----EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTC
T ss_pred cCCCC-CEEcCC-CEE----eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcC
Confidence 46665 788775 788 89999854 458 7887543 3786 48999999999999999997643
Q ss_pred --------CCccccccccCC-CCCcc--CceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 166 --------LITCSYLHPCEA-WGTCS--QDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 166 --------~~~C~~~~eC~~-~~~Cs--~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
+..|++++||.. ...|. +.|+++ .++|+|.|++||.+..+.+.|...
T Consensus 82 ~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~--~g~y~C~C~~Gy~g~~~~~~C~~~ 139 (143)
T 2bou_A 82 AKTFKNESENTCQDVDECSSGQHQCDSSTVCFNT--VGSYSCRCRPGWKPRHGIPNNQKD 139 (143)
T ss_dssp CSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEEC--SSCEEEECCSSSCBCTTCCSSBTT
T ss_pred ccccccCCCCCcCCccCccCcCCCCCCCCEEECC--CCCEEeeCCCCcccCCCCccCccC
Confidence 458999999973 56886 689999 999999999999999888888655
No 112
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.01 E-value=3.9e-06 Score=97.19 Aligned_cols=334 Identities=8% Similarity=-0.031 Sum_probs=198.4
Q ss_pred ccccccceEEEEecCCCcEEEEccCCce-EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEE
Q psy14257 407 DNLWIGKNLYWVESNLDQIEVAKLSGQF-RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIV 484 (841)
Q Consensus 407 avdw~~~~LY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~ 484 (841)
..|+ .+.+|++....++|.+++.+... ...+- .+ ..|.+++++|+.++||++.. .+.|..+++. .+.. ++.
T Consensus 162 ~~d~-~~~~~V~~~~~~~V~viD~~t~~v~~~i~-~g-~~p~~v~~SpDGr~lyv~~~---dg~V~viD~~~~t~~-~v~ 234 (567)
T 1qks_A 162 DWDL-ENLFSVTLRDAGQIALIDGSTYEIKTVLD-TG-YAVHISRLSASGRYLFVIGR---DGKVNMIDLWMKEPT-TVA 234 (567)
T ss_dssp CCCG-GGEEEEEETTTTEEEEEETTTCCEEEEEE-CS-SCEEEEEECTTSCEEEEEET---TSEEEEEETTSSSCC-EEE
T ss_pred ccCC-CceEEEEeCCCCeEEEEECCCCeEEEEEe-CC-CCccceEECCCCCEEEEEcC---CCeEEEEECCCCCCc-EeE
Confidence 3443 57899999999999999997643 43433 22 47899999999999999874 4689999985 3332 232
Q ss_pred EecccCCCCCCceeEEEe----ccCCEEEEEeCCCCeEEEEEcCCCee-EEEEcCCCC--------CCcceEEEEe--cC
Q psy14257 485 RVDLLTSRGAWPNGLTLD----YQLTRIYWIDAKSDSIHTVTYDGKDH-HVVLSNHDS--------LTHPFAIALF--EN 549 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD----~~~~~LYw~d~~~~~I~~~~~dG~~~-~~i~~~~~~--------l~~P~gla~~--~~ 549 (841)
.. .....|.+|+++ +++++||+++...+.|..+|...... +++...... -.++.+|... ..
T Consensus 235 ~i----~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 235 EI----KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp EE----ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred EE----ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 21 234569999999 58899999999889999998655333 333221100 0123445442 35
Q ss_pred eEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCC
Q psy14257 550 HVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNK 629 (841)
Q Consensus 550 ~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~ 629 (841)
.+|++...++.|..++..+.+...+..... +.- +.+..+.+|
T Consensus 311 ~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~--------------------~~~----------------~~d~~~~pd-- 352 (567)
T 1qks_A 311 EFIVNVKETGKILLVDYTDLNNLKTTEISA--------------------ERF----------------LHDGGLDGS-- 352 (567)
T ss_dssp EEEEEETTTTEEEEEETTCSSEEEEEEEEC--------------------CSS----------------EEEEEECTT--
T ss_pred EEEEEecCCCeEEEEecCCCccceeeeeec--------------------ccc----------------ccCceECCC--
Confidence 677777778888888765444332211000 000 001112222
Q ss_pred cccccCceeEEeec--CCeEEEEecCCCCccccceeec-CCCCCc-eEEE-EecCCCEEEEEE-CCCCeEEEEEcccCce
Q psy14257 630 TCQVADSQFIIFSR--PREIRGVDLEHPYYHTIPTISI-PQVFSP-NNLN-FDAANKKIYWTD-QEYNEVKRSSIVGGQI 703 (841)
Q Consensus 630 tC~~~~~~~l~~~~--~~~i~~~~l~~~~~~~~~~~~~-~~~~~~-~~v~-~d~~~~~iyw~d-~~~~~I~~~~~~g~~~ 703 (841)
..+++++. .+.|..+++... .....+++ ....+| .++. ++|..+.+|++. ...++|..++.+....
T Consensus 353 ------gr~~~va~~~sn~V~ViD~~t~--kl~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~ 424 (567)
T 1qks_A 353 ------HRYFITAANARNKLVVIDTKEG--KLVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGH 424 (567)
T ss_dssp ------SCEEEEEEGGGTEEEEEETTTT--EEEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred ------CCEEEEEeCCCCeEEEEECCCC--cEEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCC
Confidence 23444443 356777776533 22334455 444554 2333 588778887765 3568899888765210
Q ss_pred eeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCC------CCeEEEEecCCc-----
Q psy14257 704 QLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPT------QSKIVVCNLEGE----- 772 (841)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~------~~~I~v~~l~g~----- 772 (841)
+...-...+++-. .-..+..|++.+.+++||+.+ .. .++|.|++++..
T Consensus 425 ------------------~~~~~kvv~~i~~-~g~g~~~i~~~p~~~~l~v~~--~~~~~~~~~~~v~v~d~~~~~~~g~ 483 (567)
T 1qks_A 425 ------------------PDNAWKILDSFPA-LGGGSLFIKTHPNSQYLYVDA--TLNPEAEISGSVAVFDIKAMTGDGS 483 (567)
T ss_dssp ------------------TTTBTSEEEEEEC-SCSCCCCEECCTTCSEEEEEC--TTCSSHHHHTCEEEEEGGGCCCSSS
T ss_pred ------------------ccccCEEEEEEec-CCCCCEEEEeCCCCCeEEEec--CCCCCcccCceEEEEECCccccccc
Confidence 0000001223322 223456788999999999983 22 358999987533
Q ss_pred ce--EEEE-c---CCCCCCCcCCCceEEEEeCCCCeEEEEecCCC--cceEEEEecC
Q psy14257 773 YQ--TTIL-S---NESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ--VVTIEMAFMD 821 (841)
Q Consensus 773 ~~--~~~~-~---~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~--~~~I~~~~~d 821 (841)
.. .++- . + ..+. -..|..+++.|...+||++.|+++ ...|...+..
T Consensus 484 ~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 484 DPEFKTLPIAEWAG-ITEG--QPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp CCCEEEECHHHHHT-CCSS--CCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCCcEEeccccccc-cCCC--CcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 22 2331 1 1 0000 358999999999999999988532 2467765433
No 113
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.99 E-value=4.4e-08 Score=107.02 Aligned_cols=300 Identities=7% Similarity=-0.103 Sum_probs=171.3
Q ss_pred cceEEEEecCCC----cEEEEccCCc-eEEEEecCCCCCceeEEEcCCCCeEEEEecC-------CCCCeEEEecCCCCC
Q psy14257 412 GKNLYWVESNLD----QIEVAKLSGQ-FRRTLIAGDMESPRAIALDPRFGLLFWTDWD-------SKAPRIERCSMSGEH 479 (841)
Q Consensus 412 ~~~LY~tD~~~~----~I~v~~~~G~-~~~~l~~~~l~~P~giavd~~~g~Ly~td~~-------~~~~~I~r~~ldG~~ 479 (841)
..++|+++...+ +|.++|++.. ...++-. + ..| +|+++|+.++||++++. +..+.|...++.-..
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~v-G-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLG-A-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEE-C-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeC-C-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 378999998877 8889998754 4444433 3 358 99999999999999842 124678888886433
Q ss_pred cEEEEEecccC--CCCCCceeEEEeccCCEEEEEeCC-CCeEEE--EEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEE
Q psy14257 480 RSVIVRVDLLT--SRGAWPNGLTLDYQLTRIYWIDAK-SDSIHT--VTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWT 554 (841)
Q Consensus 480 ~~~i~~~~~~~--~~~~~P~glalD~~~~~LYw~d~~-~~~I~~--~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~t 554 (841)
...-+..+-.. .....|.++++++++++||+++.. .+.|.. +|+.. .+++... ..+.+...+.+.|++
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~-----~~~~~~p~g~~~~~~ 180 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSA-----SCFHIHPGAAATHYL 180 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECS-----SCCCCEEEETTEEEC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECC-----CceEEccCCCeEEEE
Confidence 32222210000 013579999999999999999865 567777 66655 4444321 112344456778888
Q ss_pred eCCCCeEEEEeccCCc--ceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 555 DWRTNSVIRANKWNGS--DVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 555 d~~~~~i~~~~~~~g~--~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
....+++..++..+.. ..+++... . + ..+. ... |. . .+
T Consensus 181 ~~~dg~~~~vd~~~~~~~~~~v~~~~-t-~----~i~v-------------------g~~------P~--~-~~------ 220 (368)
T 1mda_H 181 GSCPASLAASDLAAAPAAAGIVGAQC-T-G----AQNC-------------------SSQ------AA--Q-AN------ 220 (368)
T ss_dssp CCCTTSCEEEECCSSCCCCEECCCCS-C-T----TSCB-------------------CSC------CE--E-ET------
T ss_pred EcCCCCEEEEECccccccCCeEEEEe-e-e----eeeC-------------------CCC------cc--c-cc------
Confidence 8777777666654300 01111000 0 0 0000 000 00 0 11
Q ss_pred ccCceeEEeecCCeEEEEecCCCCccccceeecC------CCCCceE---EEEecCCCEEEEEEC---C-----CCeEEE
Q psy14257 633 VADSQFIIFSRPREIRGVDLEHPYYHTIPTISIP------QVFSPNN---LNFDAANKKIYWTDQ---E-----YNEVKR 695 (841)
Q Consensus 633 ~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~------~~~~~~~---v~~d~~~~~iyw~d~---~-----~~~I~~ 695 (841)
....+++++. +.+..+++..........+++. ....|.+ +++++..+++|++.. . .+.+..
T Consensus 221 -~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~V 298 (368)
T 1mda_H 221 -YPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSS 298 (368)
T ss_dssp -TTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEE
T ss_pred -cCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEE
Confidence 1122333333 5566666543211111111111 0112222 789999999999864 2 234556
Q ss_pred EEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCC-CCCeEEEEecCCcce
Q psy14257 696 SSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSP-TQSKIVVCNLEGEYQ 774 (841)
Q Consensus 696 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~-~~~~I~v~~l~g~~~ 774 (841)
+++.... . ...|-. + ..|.||++++.++.||+++ . ..++|.|+++.....
T Consensus 299 iD~~t~~--v-----------------------v~~i~v-g-~~p~gi~~s~Dg~~l~va~--~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 299 VTASVGQ--T-----------------------SGPISN-G-HDSDAIIAAQDGASDNYAN--SAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EESSSCC--E-----------------------EECCEE-E-EEECEEEECCSSSCEEEEE--ETTTTEEEEEESSSCEE
T ss_pred EECCCCe--E-----------------------EEEEEC-C-CCcceEEECCCCCEEEEEc--cCCCCeEEEEECCCCcE
Confidence 6665433 0 111111 1 1599999999999999995 4 579999999876543
Q ss_pred EEEEcCCCCCCCcCCCceEEEEeCC
Q psy14257 775 TTILSNESNDTSTLSKISSIAVWPV 799 (841)
Q Consensus 775 ~~~~~~~~~~~~~l~~p~~iavd~~ 799 (841)
..-+.. ...|.+|+++++
T Consensus 350 v~~I~v-------g~~P~~i~~~~~ 367 (368)
T 1mda_H 350 QSSVEL-------DKGPESLSVQNE 367 (368)
T ss_dssp EEECCC-------CSCCCEEECCCC
T ss_pred EEEEEC-------CCCCCEEEeecC
Confidence 333333 478999999864
No 114
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.99 E-value=3.2e-07 Score=100.41 Aligned_cols=282 Identities=11% Similarity=-0.001 Sum_probs=157.0
Q ss_pred eEEEecCC-CeEEEEEec--CCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEcc--CCCc
Q psy14257 265 VFWTDVID-DKIYNATLI--GNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGM--HGEN 339 (841)
Q Consensus 265 lyw~d~~~-~~I~~~~~~--~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~--dG~~ 339 (841)
||+..... +.|+.+.++ +|.+.........+...|..+|+++.++.+| .++.+ .|..+++ +|+.
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~--~~~~~---------~v~~~~~~~~g~~ 73 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIY--GAAMK---------KWSSFAVKSPTEI 73 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEE--EEEBT---------EEEEEEEEETTEE
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEE--EEccc---------eEEEEEECCCCCE
Confidence 55544332 456666554 3321111111112455799999998765454 34321 5666665 4543
Q ss_pred cccccccCcCCCceEEEEccCCEEE--EEe------C------CCCeEEEEEec--CCccEEEEeeeeecCCCccccCCC
Q psy14257 340 RSPLVTKNIQWPSSLVIDYNQDILY--WCD------S------HLNTVESVRVD--GSERTVSFNLEVLGSDSRVGIPNC 403 (841)
Q Consensus 340 ~~~l~~~~~~~P~glavD~~~~~lY--waD------~------~~~~I~~~~ld--G~~~~~~~~~~~~~~~~~~~i~~~ 403 (841)
.........+.|..+++++++++|| .++ . ..+.|..++++ |.....+...........
T Consensus 74 ~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~------ 147 (365)
T 1jof_A 74 VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGI------ 147 (365)
T ss_dssp EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCE------
T ss_pred EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcc------
Confidence 2211111123588899999888644 444 1 46777777775 432222211100000111
Q ss_pred CCCccccccceEEEEecCCCcEEEEccC--CceEEE-Eec--CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC--
Q psy14257 404 RPEDNLWIGKNLYWVESNLDQIEVAKLS--GQFRRT-LIA--GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-- 476 (841)
Q Consensus 404 ~~~avdw~~~~LY~tD~~~~~I~v~~~~--G~~~~~-l~~--~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-- 476 (841)
..++++..++.||+++...++|.+++++ |+.... .+. .....|++++++|+..+||++... .+.|....++
T Consensus 148 ~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~--~~~v~v~~~~~~ 225 (365)
T 1jof_A 148 HGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEA--GNRICEYVIDPA 225 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETT--TTEEEEEEECTT
T ss_pred eEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECC--CCeEEEEEEeCC
Confidence 1123444557799999888899999986 544321 121 113579999999998899999865 4566666554
Q ss_pred -CCCcEEEEEecccCCCC---C-------CceeEE-EeccCCEEEEEeCCCC-----eEEEEEcC--CCeeEE--EEcCC
Q psy14257 477 -GEHRSVIVRVDLLTSRG---A-------WPNGLT-LDYQLTRIYWIDAKSD-----SIHTVTYD--GKDHHV--VLSNH 535 (841)
Q Consensus 477 -G~~~~~i~~~~~~~~~~---~-------~P~gla-lD~~~~~LYw~d~~~~-----~I~~~~~d--G~~~~~--i~~~~ 535 (841)
|.....+......+..+ . .|.+++ +++++++||+++...+ .|..++++ |..... .....
T Consensus 226 ~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~ 305 (365)
T 1jof_A 226 THMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTP 305 (365)
T ss_dssp TCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecC
Confidence 33211011111111111 1 588999 9999889999986555 88888874 443321 12111
Q ss_pred CCCCcceEEEEe-----cCeEEEEeCCCCeEEEEecc
Q psy14257 536 DSLTHPFAIALF-----ENHVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 536 ~~l~~P~gla~~-----~~~lY~td~~~~~i~~~~~~ 567 (841)
...|.++++. +.+||+++...+.|..++..
T Consensus 306 --~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 306 --TSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp --SCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred --CCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 2345666653 57899998877777655543
No 115
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.99 E-value=2.8e-08 Score=107.47 Aligned_cols=114 Identities=12% Similarity=-0.002 Sum_probs=84.7
Q ss_pred CCCCCceeEEEcCCCCeEEEEecC---------------CCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccC
Q psy14257 441 GDMESPRAIALDPRFGLLFWTDWD---------------SKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQL 505 (841)
Q Consensus 441 ~~l~~P~giavd~~~g~Ly~td~~---------------~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~ 505 (841)
..+..|+++++++. |.+|+++.. ...++|+|++.. ..+++.. .+..||||++++++
T Consensus 162 ~~~~~pND~~v~~~-G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~------~l~~pNGia~spDg 232 (355)
T 3sre_A 162 KLLPSVNDIVAVGP-EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAE------GFDFANGINISPDG 232 (355)
T ss_dssp TTCSSEEEEEEEET-TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEE------EESSEEEEEECTTS
T ss_pred CCCCCCceEEEeCC-CCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeec------CCcccCcceECCCC
Confidence 35788999999986 778877631 124689999873 3444443 68899999999999
Q ss_pred CEEEEEeCCCCeEEEEEcCC--C--eeEEEEcCCCCCCcceEEEEec--CeEEEEe-CCCCeEEEEecc
Q psy14257 506 TRIYWIDAKSDSIHTVTYDG--K--DHHVVLSNHDSLTHPFAIALFE--NHVYWTD-WRTNSVIRANKW 567 (841)
Q Consensus 506 ~~LYw~d~~~~~I~~~~~dG--~--~~~~i~~~~~~l~~P~gla~~~--~~lY~td-~~~~~i~~~~~~ 567 (841)
++||++|...++|+++++++ + .++++ .. ...|.|++++. |.||++. |...+|.+.++.
T Consensus 233 ~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~---~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 233 KYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF---DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC---SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC---CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 99999999999999999864 2 22333 22 35799999973 8999965 666677776654
No 116
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.98 E-value=1.6e-08 Score=113.86 Aligned_cols=256 Identities=14% Similarity=0.057 Sum_probs=148.6
Q ss_pred EEEeCCCCCccceEEeeecC-ceeEEEeeecCCCCCCCCCCEEEEccCCCccc-ccc------ccC-----cCCCceEEE
Q psy14257 290 VVVQTGLSTAEGLAVDWIGK-NLYMFWAFWSLSPSNSSDGGIEKAGMHGENRS-PLV------TKN-----IQWPSSLVI 356 (841)
Q Consensus 290 ~~~~~~l~~p~giavD~~~~-~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~-~l~------~~~-----~~~P~glav 356 (841)
.++..+|..|.+||+.+.+. ++|| ++ ..|+|.+++.+|.... ++. ... ..-+.|||+
T Consensus 7 ~~va~gL~~P~~~a~~pdG~~rl~V--~e--------r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~ 76 (463)
T 2wg3_C 7 QEVVSGLRQPVGALHSGDGSQRLFI--LE--------KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAF 76 (463)
T ss_dssp EEEEEEESSEEEEECCSSSSCCEEE--EE--------TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEE
T ss_pred EEeccCCCCceEEEECCCCCeEEEE--Ee--------CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEe
Confidence 34566899999999998653 3554 44 2478999988775322 211 111 245678999
Q ss_pred Ecc---CCEEEEEeCCC------------CeEEEEEecCC--------ccEEEEeeeeecCCCccccCCCCCCccccccc
Q psy14257 357 DYN---QDILYWCDSHL------------NTVESVRVDGS--------ERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGK 413 (841)
Q Consensus 357 D~~---~~~lYwaD~~~------------~~I~~~~ldG~--------~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~ 413 (841)
++. +++||++-... .+|.|+.++.. ..++++..... .... .-..++++. .+
T Consensus 77 ~P~f~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~-~~~H----~g~~l~fgp-DG 150 (463)
T 2wg3_C 77 HPNYKKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAEL-HRKH----LGGQLLFGP-DG 150 (463)
T ss_dssp CTTHHHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEES-SSSS----CEEEEEECT-TS
T ss_pred CCCCcCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCC-CCcc----cCCcEeECC-CC
Confidence 985 78999986521 37888888632 23455543211 1000 001112222 27
Q ss_pred eEEEEecC-----------------CCcEEEEccCCce-------------------EEEEecCCCCCceeEEEcCCCC-
Q psy14257 414 NLYWVESN-----------------LDQIEVAKLSGQF-------------------RRTLIAGDMESPRAIALDPRFG- 456 (841)
Q Consensus 414 ~LY~tD~~-----------------~~~I~v~~~~G~~-------------------~~~l~~~~l~~P~giavd~~~g- 456 (841)
+||++-.. .++|.+++++|+. ...+.+.++.+|.+|++||..|
T Consensus 151 ~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~ 230 (463)
T 2wg3_C 151 FLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTD 230 (463)
T ss_dssp CEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSS
T ss_pred cEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCC
Confidence 99998421 4679999999941 1234556889999999999854
Q ss_pred -----eEEEEec-CCC--CCeEEEecCCCCCc---EEEEEecccCCCCCCceeEEEec------cCCEEEEEeCCCCeEE
Q psy14257 457 -----LLFWTDW-DSK--APRIERCSMSGEHR---SVIVRVDLLTSRGAWPNGLTLDY------QLTRIYWIDAKSDSIH 519 (841)
Q Consensus 457 -----~Ly~td~-~~~--~~~I~r~~ldG~~~---~~i~~~~~~~~~~~~P~glalD~------~~~~LYw~d~~~~~I~ 519 (841)
+||.+|. +.. ...|.++.. |.+. ..+... ....-..|.|+++-. ..+.+|+++.. ++|.
T Consensus 231 ~~G~l~~~~~D~~G~~~~~~ei~~i~~-G~~yG~~~P~~~~--~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~ 306 (463)
T 2wg3_C 231 ININLTILCSDSNGKNRSSARILQIIK-GKDYESEPSLLEF--KPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFL 306 (463)
T ss_dssp TTCSEEEEEECC------CEEEEEEC-----CCSCCCCEEC--CC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEE
T ss_pred cccceEEEecccCCCCCCCCeEeeecc-CCCCCCCCCeEEe--eCCCCccccceEEEeCCCChhhcceEEEecCC-CcEE
Confidence 7888885 311 124554432 2211 111210 001114688998832 23568889986 7899
Q ss_pred EEEcCCCe---eEEEE-cC------CCCCCcceEEEEe-cCeEEEEeC-------CCCeEEEEe
Q psy14257 520 TVTYDGKD---HHVVL-SN------HDSLTHPFAIALF-ENHVYWTDW-------RTNSVIRAN 565 (841)
Q Consensus 520 ~~~~dG~~---~~~i~-~~------~~~l~~P~gla~~-~~~lY~td~-------~~~~i~~~~ 565 (841)
++.+++.. ....+ .. .....+|.+|++. +|.||++++ ..++|+|+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 307 TLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp EEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred EEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEeccCCcccCCCCcEEEec
Confidence 99886532 22222 11 1224578899985 589999998 467788775
No 117
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.97 E-value=9.5e-11 Score=106.18 Aligned_cols=96 Identities=25% Similarity=0.577 Sum_probs=76.0
Q ss_pred eEecC---CCCCCCCCCCCCCCCCccc--ccccc--cCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccCCCCC
Q psy14257 108 TCIPK---ALVCDGEPACFNGEDEMFC--DEKQC--LRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGT 180 (841)
Q Consensus 108 ~Ci~~---~~~Cdg~~~C~~g~de~~C--~eC~~--~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~ 180 (841)
.|++. +|.| .|++||....+ ++|.. .+++|.+.|.+ .++|+|.|++||.+.. ++.|++++||....+
T Consensus 15 ~C~~~~~g~y~C----~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g~~C~dideC~~~~~ 88 (118)
T 1dx5_I 15 QCQPLDQTSYLC----VCAEGFAPIPHEPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD-GFICTDIDECENGGF 88 (118)
T ss_dssp EEEECSSSCEEE----ECCTTEEEETTEEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-TTEEEECCHHHHCSS
T ss_pred CCCCCCCCCEEe----ECCCCccccCCCCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-CCccccccccCCCCC
Confidence 56554 7889 89999965433 23432 35678888998 5999999999999866 889999999975578
Q ss_pred ccCceeecCCCCceEEeecCCeeecCC-CCce
Q psy14257 181 CSQDCEPSVSNNSYKCTCHAGYELEPD-MFTC 211 (841)
Q Consensus 181 Cs~~C~~~~~~g~~~C~C~~G~~l~~d-~~~C 211 (841)
|.+.|+++ .++|+|.|++||.+..+ +++|
T Consensus 89 C~~~C~n~--~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 89 CSGVCHNL--PGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp CSSEEEEC--SSSEEEEECSSSSCEEEESCCC
T ss_pred CcCeEEeC--CCCEEEECCCCCccCCCCCCCC
Confidence 98899999 99999999999987655 4443
No 118
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.94 E-value=6.3e-10 Score=93.55 Aligned_cols=74 Identities=31% Similarity=0.717 Sum_probs=61.6
Q ss_pred ccccccCCCCCC-CcccCCCCcEEecCCCceecCCCCccccccccCCCCCcc-CceeecCCCCceEEeecCCeeecCCCC
Q psy14257 132 DEKQCLRSDCHH-DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCS-QDCEPSVSNNSYKCTCHAGYELEPDMF 209 (841)
Q Consensus 132 ~eC~~~~~~C~~-~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs-~~C~~~~~~g~~~C~C~~G~~l~~d~~ 209 (841)
+||.. +.+|.+ .|++++++|+|.|++||.+ +++.|++++||....+|. +.|.++ .++|+|.|++||.+..+ +
T Consensus 6 deC~~-~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~~~~C~~~~C~n~--~g~y~C~C~~G~~g~~~-~ 79 (82)
T 1emn_A 6 DECKE-PDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVGNPCGNGTCKNV--IGGFECTCEEGFEPGPM-M 79 (82)
T ss_dssp CSSSS-TTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGTCCTTSSSCEEEC--SSSEEECCSSSSCCCSS-S
T ss_pred ccCCC-CCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccCCCCCCCCEeECC--CCCEEeECCCCeEeCCC-C
Confidence 56654 457764 8999999999999999987 678999999997556785 589999 99999999999998766 5
Q ss_pred ce
Q psy14257 210 TC 211 (841)
Q Consensus 210 ~C 211 (841)
.|
T Consensus 80 ~C 81 (82)
T 1emn_A 80 TC 81 (82)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 119
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.93 E-value=5.5e-10 Score=129.34 Aligned_cols=93 Identities=34% Similarity=0.679 Sum_probs=71.0
Q ss_pred eccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCccccCCCCCCCCCCc
Q psy14257 3 CIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNC 82 (841)
Q Consensus 3 Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C~~dC~~~~de~~C 82 (841)
|++..+.||+..+|.+.+++ | |..++|+|. ++.||+..|+|||..||. |+|||.+|
T Consensus 183 ~~~~~h~~DagV~C~~~~~~----c----~~~~~~~C~-~~~ci~~~~~Cdg~~dC~--d~sDE~~C------------- 238 (565)
T 2xrc_A 183 RRTMGYQDFADVVCYTQKAD----S----PMDDFFQCV-NGKYISQMKACDGINDCG--DQSDELCC------------- 238 (565)
T ss_dssp CCCCSSCCCCEEEBCCC-----------------CBCT-TSCBCCTTSTTSSSCCSS--SSSSSSSB-------------
T ss_pred ccccccccCCceeccccccC----C----CCcCeeECC-CCCccCHHHcCCCcccCC--CCcccccc-------------
Confidence 45566788888888765432 2 345679997 889999999999999999 88877654
Q ss_pred cCCCCCCCCCCCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 83 THSGNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 83 ~~c~~~~~c~~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
.. |++.+|.|.+ +.|++...+|||..+|.+|+||..|
T Consensus 239 ~~----------c~~~~~~C~~--~~C~~~~~~cdG~~dC~~gsDE~~C 275 (565)
T 2xrc_A 239 KA----------CQGKGFHCKS--GVCIPSQYQCNGEVDCITGEDEVGC 275 (565)
T ss_dssp SS----------CSSSCEEETT--TEEECGGGTTSSSCCSSSCTTSSSC
T ss_pred cc----------cCCCceecCC--CcccCccccCCCcccCCCCccccCc
Confidence 22 5566889988 7899999999999999999999777
No 120
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.92 E-value=6.5e-08 Score=105.72 Aligned_cols=279 Identities=8% Similarity=-0.058 Sum_probs=171.4
Q ss_pred eEEEecCCC----eEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC-Cc
Q psy14257 265 VFWTDVIDD----KIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-EN 339 (841)
Q Consensus 265 lyw~d~~~~----~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~~ 339 (841)
+|+++...+ +|.+++++.+. ... .+..+. .| +++++|.++.+|+.-+.+........++.|..+++.. +.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~--v~~-~i~vG~-~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGV--TLG-HSLGAF-LS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTE--EEE-EEEECT-TC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred EEEECCccCCccceEEEEECCCCe--EEE-EEeCCC-CC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 888888776 66677765543 222 233443 58 9999998888877644321100001134688888764 33
Q ss_pred ccccccc------CcCCCceEEEEccCCEEEEEeCC-CCeEEE--EEecCCccEEEEeeeeecCCCccccCCCCCCcccc
Q psy14257 340 RSPLVTK------NIQWPSSLVIDYNQDILYWCDSH-LNTVES--VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW 410 (841)
Q Consensus 340 ~~~l~~~------~~~~P~glavD~~~~~lYwaD~~-~~~I~~--~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw 410 (841)
...+... ....|.+|++++++++||+++.. .+.|.. +++.. ...+ .+. . + ..+..
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i-~v~-----~------~--~~~~p 172 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLT-KSA-----S------C--FHIHP 172 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEE-ECS-----S------C--CCCEE
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEE-ECC-----C------c--eEEcc
Confidence 3333221 13579999999999999999975 566777 55544 2222 110 0 0 11223
Q ss_pred ccceEEEEecCCCcEEEEccCC----ceEEEE-----ecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcE
Q psy14257 411 IGKNLYWVESNLDQIEVAKLSG----QFRRTL-----IAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRS 481 (841)
Q Consensus 411 ~~~~LY~tD~~~~~I~v~~~~G----~~~~~l-----~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~ 481 (841)
.++.+|++....+++.+++++. ...... +.. -..|. + .+..+.+||+.. +.|+.+++.+...+
T Consensus 173 ~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~v-g~~P~--~-~~~~~~~~~vs~----~~V~viD~~~~~~~ 244 (368)
T 1mda_H 173 GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNC-SSQAA--Q-ANYPGMLVWAVA----SSILQGDIPAAGAT 244 (368)
T ss_dssp EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCB-CSCCE--E-ETTTTEEEECBS----SCCEEEECCSSCCE
T ss_pred CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeC-CCCcc--c-cccCCEEEEEcC----CEEEEEECCCCcce
Confidence 3477888888888888888765 222110 111 14576 4 566788888874 57888888765554
Q ss_pred EEEEecccC----CCCCCcee---EEEeccCCEEEEEeC---C-----CCeEEEEEcCCCee-EEEEcCCCCCCcceEEE
Q psy14257 482 VIVRVDLLT----SRGAWPNG---LTLDYQLTRIYWIDA---K-----SDSIHTVTYDGKDH-HVVLSNHDSLTHPFAIA 545 (841)
Q Consensus 482 ~i~~~~~~~----~~~~~P~g---lalD~~~~~LYw~d~---~-----~~~I~~~~~dG~~~-~~i~~~~~~l~~P~gla 545 (841)
++....+.. .....|.| +++++.+++||++.. + .+.+..+|+....+ .++.. -..|.+|+
T Consensus 245 v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v----g~~p~gi~ 320 (368)
T 1mda_H 245 MKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN----GHDSDAII 320 (368)
T ss_dssp EECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE----EEEECEEE
T ss_pred EEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC----CCCcceEE
Confidence 443210000 01224666 899999999999865 3 34566888876433 22221 13699999
Q ss_pred Eec--CeEEEEeC-CCCeEEEEeccCCcceEEEe
Q psy14257 546 LFE--NHVYWTDW-RTNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 546 ~~~--~~lY~td~-~~~~i~~~~~~~g~~~~~i~ 576 (841)
+.. .++|++.. ..+.|..++..+++.+..|.
T Consensus 321 ~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 321 AAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp ECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred ECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 953 46999998 69999999988877665543
No 121
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.89 E-value=2.2e-06 Score=99.34 Aligned_cols=335 Identities=9% Similarity=0.044 Sum_probs=200.3
Q ss_pred eEEecc--CccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEec--CCcccceEEEEeCCCC
Q psy14257 222 FVIFSN--RHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLI--GNSLSNIDVVVQTGLS 297 (841)
Q Consensus 222 ~ll~s~--~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~--~~~~~~~~~~~~~~l~ 297 (841)
.+++++ .+.|..++..+..+...++....+..+.+....+. ||.++ ..+.|.++++. .+. ... .+..+ .
T Consensus 168 ~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~--lyv~~-~dg~V~viD~~~~t~~--~v~-~i~~G-~ 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRY--LFVIG-RDGKVNMIDLWMKEPT--TVA-EIKIG-S 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCE--EEEEE-TTSEEEEEETTSSSCC--EEE-EEECC-S
T ss_pred eEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCE--EEEEc-CCCeEEEEECCCCCCc--EeE-EEecC-C
Confidence 444444 46788888877655444443344556777665444 99886 46789999884 332 222 23333 3
Q ss_pred CccceEEe----eecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc-C----------cCCCceEEEEccCCE
Q psy14257 298 TAEGLAVD----WIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK-N----------IQWPSSLVIDYNQDI 362 (841)
Q Consensus 298 ~p~giavD----~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~-~----------~~~P~glavD~~~~~ 362 (841)
.|++++++ +.++.+|+ +++. .+.|..++.........+.. . -.++.+|+..+.+..
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v--~n~~-------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIA--GAYW-------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEE--EEEE-------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred CCceeEEccccCCCCCEEEE--EEcc-------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE
Confidence 79999999 56655554 3322 23666665432221111211 1 113457777777778
Q ss_pred EEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecC-
Q psy14257 363 LYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAG- 441 (841)
Q Consensus 363 lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~- 441 (841)
+|++-...+.|..+++.......+.....-... +..+++..++.+|+++...++|.++++........+..
T Consensus 312 ~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~--------~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg 383 (567)
T 1qks_A 312 FIVNVKETGKILLVDYTDLNNLKTTEISAERFL--------HDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG 383 (567)
T ss_dssp EEEEETTTTEEEEEETTCSSEEEEEEEECCSSE--------EEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred EEEEecCCCeEEEEecCCCccceeeeeeccccc--------cCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc
Confidence 888888889999998865432222221110000 01134445688999999999999999875444333332
Q ss_pred -CCCCc-eeEE-EcCCCCeEEEEecCCCCCeEEEecCCCCC-----cEEEEEecccCCCCCCceeEEEeccCCEEEEEeC
Q psy14257 442 -DMESP-RAIA-LDPRFGLLFWTDWDSKAPRIERCSMSGEH-----RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA 513 (841)
Q Consensus 442 -~l~~P-~gia-vd~~~g~Ly~td~~~~~~~I~r~~ldG~~-----~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~ 513 (841)
...+| +|+. ++|..|.+|.+... ....|..++.+... .+++.... ..-..+-.|.+.+.+.+||+...
T Consensus 384 g~~Phpg~g~~~~~p~~g~v~~t~~~-g~~~Vsvid~~~~~~~~~~~kvv~~i~---~~g~g~~~i~~~p~~~~l~v~~~ 459 (567)
T 1qks_A 384 GQTPHPGRGANFVHPTFGPVWATSHM-GDDSVALIGTDPEGHPDNAWKILDSFP---ALGGGSLFIKTHPNSQYLYVDAT 459 (567)
T ss_dssp SSSBCCTTCEEEEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEEE---CSCSCCCCEECCTTCSEEEEECT
T ss_pred CcCCCCccceeeECCCCCcEEEeCCC-CCCeEEEecCCCCCCccccCEEEEEEe---cCCCCCEEEEeCCCCCeEEEecC
Confidence 33455 5765 57877888877642 15789888887421 23333211 12233456888888888887664
Q ss_pred C------CCeEEEEEcCCC-----ee--EEEEc-----CCCCCCcceEEEEe--cCeEEEEeC----CCCeEEEEeccCC
Q psy14257 514 K------SDSIHTVTYDGK-----DH--HVVLS-----NHDSLTHPFAIALF--ENHVYWTDW----RTNSVIRANKWNG 569 (841)
Q Consensus 514 ~------~~~I~~~~~dG~-----~~--~~i~~-----~~~~l~~P~gla~~--~~~lY~td~----~~~~i~~~~~~~g 569 (841)
. .+.|..++.+.. .. +++.- -.+.-.+|..+.+. +.+||++.| ..+.|..++..++
T Consensus 460 ~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 460 LNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp TCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 2 358999987644 22 33321 01113577888884 579999998 3688999998888
Q ss_pred cceEEEe-cccCCCce
Q psy14257 570 SDVTLIQ-RTLTQPFI 584 (841)
Q Consensus 570 ~~~~~i~-~~~~~p~~ 584 (841)
+....|. ..+..|.|
T Consensus 540 ~~~~~i~~~~~~~P~g 555 (567)
T 1qks_A 540 ELKHVIKDERLVTPTG 555 (567)
T ss_dssp EEEEEECCTTCCSEEE
T ss_pred eEEEEeCCCcccCCCe
Confidence 8776664 34566766
No 122
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.89 E-value=3.6e-07 Score=93.52 Aligned_cols=198 Identities=13% Similarity=0.100 Sum_probs=130.7
Q ss_pred CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccC-CCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEE
Q psy14257 298 TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH-GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 376 (841)
Q Consensus 298 ~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~ 376 (841)
...||+++ ++.+|+--.+.+. .+|.++++. |+....+....-..+.||+++ +++||.++...+.+.++
T Consensus 44 ftqGL~~~--~~~LyestG~~g~-------S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 44 FTEGFFYR--NGYFYESTGLNGR-------SSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEEEEE--TTEEEEEEEETTE-------EEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEE
T ss_pred ccceEEEE--CCEEEEECCCCCC-------ceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEE
Confidence 34889987 3456653222222 278888875 554444433332334556665 78999999999999999
Q ss_pred EecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCC-ceEEEEecC----CCCCceeEEE
Q psy14257 377 RVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIAG----DMESPRAIAL 451 (841)
Q Consensus 377 ~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~----~l~~P~giav 451 (841)
+++......-+..+. .++++.+.++.||.+|. .++|.+.|... +....+... .+..++.+..
T Consensus 113 D~~t~~~~~ti~~~~------------eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~ 179 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG------------EGWGLTHNDQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEW 179 (262)
T ss_dssp ETTTCCEEEEEECSS------------CCCCEEECSSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEE
T ss_pred ECccCcEEEEEECCC------------CceEEecCCCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEE
Confidence 987654443333211 12345566789999995 78999999874 444443321 2355666776
Q ss_pred cCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec-ccC------CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 452 DPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD-LLT------SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 452 d~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~-~~~------~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
. +|.||.+.|. ...|.++++.-......+... +.+ ....-|||||+|+.+++||++--.=.+++.+.+
T Consensus 180 ~--~G~lyan~w~--~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 180 V--DGEIFANVWQ--TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp E--TTEEEEEETT--SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred E--CCEEEEEEcc--CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 4 6899999998 789999998644443344421 110 123468999999999999999988888888765
No 123
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.88 E-value=1.9e-10 Score=94.97 Aligned_cols=72 Identities=26% Similarity=0.525 Sum_probs=53.8
Q ss_pred CCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCccccCCCCCCCCCCccCCCCCCCCCCCCCCCCcccCCC
Q psy14257 26 HCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGNRTISAPACEPHEFDCQDV 105 (841)
Q Consensus 26 ~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C~~dC~~~~de~~C~~c~~~~~c~~~C~~~~~~C~~~ 105 (841)
+|+...|.+.+|+|.+++.|||..|+|||..||. |||||..| ..|.. ..+|.+.+|+|.+.
T Consensus 3 ~C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~--DgsDE~~~-------------~~C~~----~~~C~~~~f~c~~~ 63 (80)
T 2kny_A 3 KLEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCA--DGADESIA-------------AGCLY----NSTGSGSGSGSTEE 63 (80)
T ss_dssp SCSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSS--SSTTTSGG-------------GTCSS----SSTTTTCSSCHHHH
T ss_pred CCCCCCCCCCceecCCCCeEcChhhcCCCCCCCC--CCCccccc-------------cCCCC----CcccCcccchhhhH
Confidence 6888899999999986789999999999999999 88888653 22211 14677888899762
Q ss_pred CCeEecCCCCC
Q psy14257 106 LRTCIPKALVC 116 (841)
Q Consensus 106 ~~~Ci~~~~~C 116 (841)
.+.||+....+
T Consensus 64 ~~~ci~~~~~g 74 (80)
T 2kny_A 64 LRVRLASHLRK 74 (80)
T ss_dssp HHHHTTTTTTT
T ss_pred HHHHHHHHHHH
Confidence 23566654443
No 124
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.84 E-value=1.4e-09 Score=77.85 Aligned_cols=38 Identities=47% Similarity=1.096 Sum_probs=34.2
Q ss_pred CCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|...+|+|.+.++|||..|+|||..||. |||||.+|
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~--DgSDE~~C 39 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCM--DSSDEKSC 39 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSS--SSTTTTTC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCC--CCCcccCC
Confidence 468899999985699999999999999999 99999775
No 125
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.83 E-value=4.9e-07 Score=92.47 Aligned_cols=111 Identities=12% Similarity=0.142 Sum_probs=72.9
Q ss_pred cccccceEEEEecCCCcEEEEccCC-ceEEEEecC----CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEE
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIAG----DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSV 482 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~----~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~ 482 (841)
+.+.++.||.+| +.++|.+++... +..+.+... .+..++.|... +|.||.+.|. ...|.++++.-.....
T Consensus 141 Lt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lyanvw~--s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 141 LCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYANIWH--SSDVLEIDPATGTVVG 215 (268)
T ss_dssp EEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEEEETT--CSEEEEECTTTCBEEE
T ss_pred EecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEEEECC--CCeEEEEeCCCCcEEE
Confidence 334456677776 366777777654 333322211 23456666664 7899999998 7899999986444433
Q ss_pred EEEec-cc-------CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 483 IVRVD-LL-------TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 483 i~~~~-~~-------~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
.+... +. .....-|||||+|+.+++||++.-.=.+++.+.+
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 33321 10 1133478999999999999999988788888865
No 126
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.81 E-value=1.3e-06 Score=88.61 Aligned_cols=201 Identities=13% Similarity=0.077 Sum_probs=131.6
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccC-CCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH-GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 375 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d-G~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~ 375 (841)
....||+++. +.+|+-=...+ ...|.++++. |+....+....-..+.||+++ +++||.++...+++.+
T Consensus 21 ~ftqGL~~~~--~~LyestG~~g-------~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v 89 (243)
T 3mbr_X 21 AFTEGLFYLR--GHLYESTGETG-------RSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFV 89 (243)
T ss_dssp CCEEEEEEET--TEEEEEECCTT-------SCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEE
T ss_pred cccccEEEEC--CEEEEECCCCC-------CceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEE
Confidence 4567899884 45555211211 2378888875 444444433333344556665 7999999999999999
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCc-eEEEEecC----CCCCceeEE
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQ-FRRTLIAG----DMESPRAIA 450 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~-~~~~l~~~----~l~~P~gia 450 (841)
++++......-+... . .++++.+.+++||++|. .++|.+.+...- ..+.+-.. .+..++.|.
T Consensus 90 ~D~~tl~~~~ti~~~----~--------~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe 156 (243)
T 3mbr_X 90 YDLATLTPRARFRYP----G--------EGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELE 156 (243)
T ss_dssp EETTTTEEEEEEECS----S--------CCCEEEECSSCEEEECS-SSEEEEECTTTCCEEEEEECEETTEECCCEEEEE
T ss_pred EECCcCcEEEEEeCC----C--------CceEEeeCCCEEEEECC-CCeEEEEeCCCCeEEEEEEEccCCcccccceeeE
Confidence 998765443333321 1 13455667799999995 889999998753 33333221 134555555
Q ss_pred EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEec-ccC-------CCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 451 LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVD-LLT-------SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 451 vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~-~~~-------~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
.. +|.||...|. ...|.++++.-......+... +.+ ....-|||||+|+.+++||++.-.=.+++.+.
T Consensus 157 ~~--~G~lyanvw~--s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 157 WV--NGELLANVWL--TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp EE--TTEEEEEETT--TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred Ee--CCEEEEEECC--CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 43 7999999998 689999998644443333321 211 13347899999999999999998888998887
Q ss_pred cCC
Q psy14257 523 YDG 525 (841)
Q Consensus 523 ~dG 525 (841)
+..
T Consensus 233 ~~~ 235 (243)
T 3mbr_X 233 LTP 235 (243)
T ss_dssp ECC
T ss_pred Eec
Confidence 643
No 127
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.81 E-value=9.8e-07 Score=90.28 Aligned_cols=199 Identities=17% Similarity=0.206 Sum_probs=120.3
Q ss_pred eeEEEeccCCEEEEEeCCC--CeEEEEEcCCCe-eEEEEcCCCCCCcc--eEEEEecCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 497 NGLTLDYQLTRIYWIDAKS--DSIHTVTYDGKD-HHVVLSNHDSLTHP--FAIALFENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~~~--~~I~~~~~dG~~-~~~i~~~~~~l~~P--~gla~~~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
.||+++ +++||.+.... +.|.++|+.... .+.+.-. ..+ -||++.+++||++.|..+.+..++..+.+.
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~----~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~ 119 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELG----KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECC----TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecC----CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcE
Confidence 899998 57999998654 499999997544 3444221 244 458889999999999999999999888776
Q ss_pred eEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEEEE
Q psy14257 572 VTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIRGV 650 (841)
Q Consensus 572 ~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~~~ 650 (841)
+..+... +.|+.|..|+. .|++++ .+.|+.+
T Consensus 120 ~~ti~~~----------------------------------------~eG~glt~dg~--------~L~~SdGs~~i~~i 151 (262)
T 3nol_A 120 VRSFNYD----------------------------------------GEGWGLTHNDQ--------YLIMSDGTPVLRFL 151 (262)
T ss_dssp EEEEECS----------------------------------------SCCCCEEECSS--------CEEECCSSSEEEEE
T ss_pred EEEEECC----------------------------------------CCceEEecCCC--------EEEEECCCCeEEEE
Confidence 6554321 12333333322 233333 2334444
Q ss_pred ecCCCCccccceeecCC----CCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccC
Q psy14257 651 DLEHPYYHTIPTISIPQ----VFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVG 726 (841)
Q Consensus 651 ~l~~~~~~~~~~~~~~~----~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (841)
+. ........+++.. +..+..++|. +++||.....++.|.+++.....+...++ ++.+.... .
T Consensus 152 Dp--~T~~v~~~I~V~~~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id------~~~L~~~~---~ 218 (262)
T 3nol_A 152 DP--ESLTPVRTITVTAHGEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIID------LNGILAEA---G 218 (262)
T ss_dssp CT--TTCSEEEEEECEETTEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEE------CTTGGGGS---C
T ss_pred cC--CCCeEEEEEEeccCCccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEE------CCcCcccc---c
Confidence 33 2222222333321 1333456665 78999888889999999997766222221 01110000 0
Q ss_pred ceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec
Q psy14257 727 GQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL 769 (841)
Q Consensus 727 ~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l 769 (841)
. .....+.|+|||+|+.+++||+| ...=+++..+++
T Consensus 219 ~-----~~~~~~vlNGIA~dp~~~~lfVT--GK~Wp~~~ev~~ 254 (262)
T 3nol_A 219 P-----LPSPIDVLNGIAWDKEHHRLFVT--GKLWPKVFEITL 254 (262)
T ss_dssp S-----CCSSCCCEEEEEEETTTTEEEEE--ETTCSEEEEEEE
T ss_pred c-----ccCcCCceEEEEEcCCCCEEEEE--CCCCCceEEEEE
Confidence 0 01234578999999999999999 444556555544
No 128
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.79 E-value=0.00073 Score=78.00 Aligned_cols=311 Identities=14% Similarity=0.120 Sum_probs=182.9
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
+.+.++-...+.|.+.+.+++...++.. ......++++.|...+|..... .+.|...+.++.....+. ..
T Consensus 192 ~~~l~~~~~d~~v~~w~~~~~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~---d~~i~~w~~~~~~~~~~~------~~ 261 (577)
T 2ymu_A 192 GQTIASASDDKTVKLWNRNGQLLQTLTG-HSSSVRGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT------GH 261 (577)
T ss_dssp SSCEEEEETTSEEEEECTTSCEEEEEEC-CSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEEC------CC
T ss_pred CCEEEEEcCCCEEEEEeCCCcEEEEEec-CCCCEEEEEECCCCCEEEEEeC---CCEEEEEeCCCCEEEEEe------cC
Confidence 4445555566788889988887766543 3456789999998666665543 356666677765444332 23
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
....+++++.+.+..|..+. ..+.|...+.++...+.+... .....++++. ++...++-...+.|...+.. +..
T Consensus 262 ~~~v~~v~~~~d~~~l~~~~-~d~~i~~w~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~ 336 (577)
T 2ymu_A 262 SSSVNGVAFRPDGQTIASAS-DDKTVKLWNRNGQLLQTLTGH---SSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQH 336 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEE-TTSCEEEEETTSCEEEEECCC---SSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCE
T ss_pred CCCEEEEEEcCCCCEEEEEe-CCCEEEEEeCCCcEEEEEecC---CCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCe
Confidence 45568899987666665444 467888889888776665432 2345677774 35555555555666655542 222
Q ss_pred eEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceee--eCCCCceeecCCCcccccCceeEEeec-CCeEE
Q psy14257 572 VTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKC--QCPHVMKLMSDNKTCQVADSQFIIFSR-PREIR 648 (841)
Q Consensus 572 ~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C--~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~ 648 (841)
...+.... ....+ .-|+| .+|+.+. ...|+
T Consensus 337 ~~~~~~~~--------------------------------~~v~~~~~s~~g---------------~~l~~~~~dg~v~ 369 (577)
T 2ymu_A 337 LQTLTGHS--------------------------------SSVWGVAFSPDG---------------QTIASASDDKTVK 369 (577)
T ss_dssp EEEECCCS--------------------------------SCEEEEEECTTS---------------SEEEEEETTSEEE
T ss_pred eEEEeCCC--------------------------------CCEEEEEECCCC---------------CEEEEEeCCCEEE
Confidence 22221100 00011 11222 1233322 23344
Q ss_pred EEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCce
Q psy14257 649 GVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQ 728 (841)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (841)
..+.+... +..+ ......+.+|+|.|..+.|.... ..+.|+..+.++..
T Consensus 370 ~~~~~~~~---~~~~-~~~~~~v~~~~~s~dg~~l~~~~-~d~~v~~~~~~~~~-------------------------- 418 (577)
T 2ymu_A 370 LWNRNGQL---LQTL-TGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQL-------------------------- 418 (577)
T ss_dssp EEETTCCE---EEEE-ECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTCCE--------------------------
T ss_pred EEcCCCCE---EEEe-cCCCCCeEEEEECCCCCEEEEEe-CCCEEEEEeCCCCE--------------------------
Confidence 44432221 1111 11224577899998888776665 56778877765543
Q ss_pred EEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEec
Q psy14257 729 IQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNV 808 (841)
Q Consensus 729 ~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~ 808 (841)
... +...-..+.+|++.+.++.|..+. ..++|.+.++++.....+... -....+|++.|...+|.-...
T Consensus 419 ~~~-~~~~~~~v~~~~~s~d~~~l~~~~---~d~~v~~w~~~~~~~~~~~~~-------~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 419 LQT-LTGHSSSVWGVAFSPDDQTIASAS---DDKTVKLWNRNGQLLQTLTGH-------SSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEE-EECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTSCEEEEEECC-------SSCEEEEEECTTSCEEEEEET
T ss_pred EEE-ecCCCCCeEEEEECCCCCEEEEEc---CCCEEEEEECCCCEEEEEcCC-------CCCEEEEEEcCCCCEEEEEeC
Confidence 222 233445678899998887776662 467899999998876666543 357789999998666655443
Q ss_pred CCCcceEEEEecCCCceEEEec
Q psy14257 809 TKQVVTIEMAFMDGTKRETVVS 830 (841)
Q Consensus 809 ~~~~~~I~~~~~dG~~~~~l~~ 830 (841)
.. +|..-+.+|...+.+..
T Consensus 488 d~---~i~iw~~~~~~~~~~~~ 506 (577)
T 2ymu_A 488 DK---TVKLWNRNGQLLQTLTG 506 (577)
T ss_dssp TS---EEEEEETTSCEEEEEEC
T ss_pred CC---EEEEEcCCCCEEEEEeC
Confidence 32 46555666665555543
No 129
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.78 E-value=2.3e-06 Score=89.82 Aligned_cols=255 Identities=10% Similarity=-0.047 Sum_probs=153.6
Q ss_pred eEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccc
Q psy14257 265 VFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLV 344 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~ 344 (841)
+++++..++.|+..+...|. ..-..-......+..+++.+.+ ++++ +. .++|..++.+|+.+..+-
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~--~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~---------~~~V~~~d~~G~~~W~~~ 72 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKE--IVWEYPLEKGWECNSVAATKAG-EILF--SY---------SKGAKMITRDGRELWNIA 72 (276)
T ss_dssp EEEECTTCSEEEEEETTTTE--EEEEEECCTTCCCCEEEECTTS-CEEE--EC---------BSEEEEECTTSCEEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCe--EEEEeCCCccCCCcCeEECCCC-CEEE--eC---------CCCEEEECCCCCEEEEEc
Confidence 55555555566555553332 1111111111357778888754 5554 32 247888888887666554
Q ss_pred ccCcCCCceEEEEccCCEEEEEeCC-CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC
Q psy14257 345 TKNIQWPSSLVIDYNQDILYWCDSH-LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD 423 (841)
Q Consensus 345 ~~~~~~P~glavD~~~~~lYwaD~~-~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~ 423 (841)
...-....++++.+ ++++++++.. .++|..++.+|+....+-..... ..... .....+++ .++++++++...+
T Consensus 73 ~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~--~~~~~--~~~~v~~~-~~G~~lv~~~~~~ 146 (276)
T 3no2_A 73 APAGCEMQTARILP-DGNALVAWCGHPSTILEVNMKGEVLSKTEFETGI--ERPHA--QFRQINKN-KKGNYLVPLFATS 146 (276)
T ss_dssp CCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECTTSCEEEEEEECCSC--SSGGG--SCSCCEEC-TTSCEEEEETTTT
T ss_pred CCCCccccccEECC-CCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCC--Ccccc--cccCceEC-CCCCEEEEecCCC
Confidence 32111234555554 4566777776 88898888888765543211100 00000 00001111 2378899999999
Q ss_pred cEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCCCCCCceeEEEe
Q psy14257 424 QIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNGLTLD 502 (841)
Q Consensus 424 ~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~glalD 502 (841)
+|..++.+|+..-.+-.. ..|.++++.+. |.+++++.. ..+|..++.+ |+....+...+.....+..|.+++++
T Consensus 147 ~v~~~d~~G~~~w~~~~~--~~~~~~~~~~~-g~~~v~~~~--~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~ 221 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKLS--GTPFSSAFLDN-GDCLVACGD--AHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPL 221 (276)
T ss_dssp EEEEECTTSCEEEEEECS--SCCCEEEECTT-SCEEEECBT--TSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEEC
T ss_pred EEEEECCCCCEEEEEECC--CCccceeEcCC-CCEEEEeCC--CCeEEEEeCcCCcEEEEecCCCCCCccccccccceEc
Confidence 999999999887665543 47899999875 777888876 6789999998 87766665322222357789999998
Q ss_pred ccCCEEEEEeCC----------CCeEEEEEcCCCeeEEEEcCCCCCCcceEEEE
Q psy14257 503 YQLTRIYWIDAK----------SDSIHTVTYDGKDHHVVLSNHDSLTHPFAIAL 546 (841)
Q Consensus 503 ~~~~~LYw~d~~----------~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~ 546 (841)
.++++|+++.. ..++..++.+|+-+-.+... ..+..+.+|..
T Consensus 222 -~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~~-~~~~~~~~~~~ 273 (276)
T 3no2_A 222 -QNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLNDK-VKFGMISTICP 273 (276)
T ss_dssp -TTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECCT-TTSCCCCEEEE
T ss_pred -CCCCEEEEeccCccccccccCCceEEEECCCCCEEEEecCc-ccccceeeeee
Confidence 47899999852 33577777777655444332 33455555543
No 130
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.78 E-value=1.7e-09 Score=75.18 Aligned_cols=36 Identities=47% Similarity=1.146 Sum_probs=33.0
Q ss_pred CCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 31 KCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 31 ~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
.|...+|+|. +++||+..|+|||..||. |||||.+|
T Consensus 1 ~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~--DgsDE~~C 36 (37)
T 1ajj_A 1 PCSAFEFHCL-SGECIHSSWRCDGGPDCK--DKSDEENC 36 (37)
T ss_dssp CCCTTCEECT-TSCEECGGGTTSSSCCST--TCGGGTTC
T ss_pred CCCCCceEcC-CCCeechhhccCCCCCCC--CCccccCC
Confidence 4788999998 889999999999999999 99999775
No 131
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.78 E-value=5.1e-07 Score=94.87 Aligned_cols=216 Identities=9% Similarity=0.002 Sum_probs=145.6
Q ss_pred CCCCEEEEcc-CCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCcc-ccCCC
Q psy14257 326 SDGGIEKAGM-HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRV-GIPNC 403 (841)
Q Consensus 326 ~~~~I~~~~~-dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~-~i~~~ 403 (841)
.+++|..++. +|+.+..+.......+..++++++++ ||++ ..+.|+.++.+|+....+.... ...+ +.
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilvs--~~~~V~~~d~~G~~~W~~~~~~----~~~~~~~--- 82 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILFS--YSKGAKMITRDGRELWNIAAPA----GCEMQTA--- 82 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEEE--CBSEEEEECTTSCEEEEEECCT----TCEEEEE---
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEEe--CCCCEEEECCCCCEEEEEcCCC----Ccccccc---
Confidence 3456666666 66655554433334688899988665 4443 3567888888776444432110 0000 00
Q ss_pred CCCccccccceEEEEecC-CCcEEEEccCCceEEEEecC-C----CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC
Q psy14257 404 RPEDNLWIGKNLYWVESN-LDQIEVAKLSGQFRRTLIAG-D----MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG 477 (841)
Q Consensus 404 ~~~avdw~~~~LY~tD~~-~~~I~v~~~~G~~~~~l~~~-~----l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG 477 (841)
.+ ..++++++++.. .++|..++.+|+....+... . ...|+++++++. |.+++++.. .++|..++.+|
T Consensus 83 ---~~-~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~-G~~lv~~~~--~~~v~~~d~~G 155 (276)
T 3no2_A 83 ---RI-LPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKK-GNYLVPLFA--TSEVREIAPNG 155 (276)
T ss_dssp ---EE-CTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTT-SCEEEEETT--TTEEEEECTTS
T ss_pred ---EE-CCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCC-CCEEEEecC--CCEEEEECCCC
Confidence 00 123888999887 88999999999876654321 1 235788999875 667788876 78999999997
Q ss_pred CCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCC---CCCCcceEEEE-ecCeEE
Q psy14257 478 EHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNH---DSLTHPFAIAL-FENHVY 552 (841)
Q Consensus 478 ~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~---~~l~~P~gla~-~~~~lY 552 (841)
+....+.. -..|.+.+++ .++++++++...++|..++++ |+.+-.+.... ..+..|.++++ .++.+|
T Consensus 156 ~~~w~~~~-------~~~~~~~~~~-~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 156 QLLNSVKL-------SGTPFSSAFL-DNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp CEEEEEEC-------SSCCCEEEEC-TTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred CEEEEEEC-------CCCccceeEc-CCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEE
Confidence 65544432 2468888887 468899999888999999999 88887776431 13567899998 579999
Q ss_pred EEeCCC----------CeEEEEec
Q psy14257 553 WTDWRT----------NSVIRANK 566 (841)
Q Consensus 553 ~td~~~----------~~i~~~~~ 566 (841)
+++++. ..++.+++
T Consensus 228 v~~~~g~~~~~~~~~~~~~~~~~~ 251 (276)
T 3no2_A 228 ICNWQGHDREAGKGKHPQLVEIDS 251 (276)
T ss_dssp EEEECTTCTTGGGSCCCSEEEECT
T ss_pred EEeccCccccccccCCceEEEECC
Confidence 999743 35777765
No 132
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.77 E-value=3.4e-09 Score=74.52 Aligned_cols=36 Identities=39% Similarity=1.180 Sum_probs=32.4
Q ss_pred CCCCCcccCC-CCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 32 CDESHFTCNE-TLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 32 C~~~~~~C~~-~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
|.+.+|+|.+ .++|||..|+|||..||. |+|||.+|
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~--dgsDE~~C 37 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCD--SGEDEENC 37 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCST--TTTTSTTC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCc--CCcccccC
Confidence 6789999984 489999999999999999 99999775
No 133
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.77 E-value=4.3e-11 Score=116.87 Aligned_cols=52 Identities=31% Similarity=0.737 Sum_probs=46.5
Q ss_pred CcCCCCCCCCCCCCCCCCCCCCCCCcccC-CCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 12 GDEDCKDGSDELAEHCQDRKCDESHFTCN-ETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 12 g~~dC~dgsde~~~~C~~~~C~~~~~~C~-~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
+..+|.|+|||. +| ..|.+.+|+|. .+++|||..|+|||..||. |||||.+|
T Consensus 39 ~~~~c~d~sDE~--~C--~~C~~~~F~C~~~~g~CIp~~~~CDG~~DC~--DgSDE~~C 91 (215)
T 2gtl_O 39 KAGSLRHRVEEL--ED--PSCDEHEHQCGGDDPQCISKLFVCDGHNDCR--NGEDEKDC 91 (215)
T ss_dssp HHHHHHHHHHHH--SC--CSSCTTEEECCSSSCCEEEGGGTTSSSCCSS--SCHHHHCC
T ss_pred ccccCCcchhhc--cC--CCCCCcceeeCCCCCcCccccccCCCCCcCC--CcccccCC
Confidence 345899999999 88 47999999994 3899999999999999999 99999887
No 134
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.77 E-value=2.9e-09 Score=76.67 Aligned_cols=39 Identities=41% Similarity=1.037 Sum_probs=34.7
Q ss_pred CCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 29 DRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 29 ~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
...|...+|+|.+.++|||..|+|||..||. |+|||.+|
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~--DgSDE~~C 42 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCG--NQADEDNC 42 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSS--SCCTTSSC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCC--CCcccCCC
Confidence 4678899999984489999999999999999 99999776
No 135
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.76 E-value=5.2e-09 Score=98.36 Aligned_cols=76 Identities=26% Similarity=0.636 Sum_probs=65.6
Q ss_pred ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCccccccccCC-CCCccCce-eecCCCCceEEeecCCeeecCC
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEA-WGTCSQDC-EPSVSNNSYKCTCHAGYELEPD 207 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~-~~~Cs~~C-~~~~~~g~~~C~C~~G~~l~~d 207 (841)
++|. ..+|.+ .|.+++++|.|.|++||. |..|+++++|.. .+.|.+.| .++ .++|+|.|++||.+..+
T Consensus 49 deC~--~~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~deC~~~~~~C~~~C~~n~--~g~y~C~C~~Gy~l~~d 120 (146)
T 1x7a_L 49 DQCE--PNPCLNGGLCKDDINSYECWCQVGFE----GKNCELDATCNIKNGRCKQFCKTGA--DSKVLCSCTTGYRLAPD 120 (146)
T ss_dssp -CCS--SCSSCTTCEEEECSSCEEEECCSSEE----STTTCEECCTTSGGGSCSSBCCCCS--SSCCCCBCCTTEEECTT
T ss_pred CcCC--CCCCCCCCEeECCCCCEEEecCCCCc----CCcCCCCccccCCCCCCcCCCCCCC--CCCEEeEcCCCcEeCCC
Confidence 5665 346764 899999999999999997 778999999974 46898999 999 99999999999999999
Q ss_pred CCceEeCC
Q psy14257 208 MFTCKSKS 215 (841)
Q Consensus 208 ~~~C~~~~ 215 (841)
++.|.++.
T Consensus 121 G~~C~~~~ 128 (146)
T 1x7a_L 121 QKSCKPAV 128 (146)
T ss_dssp SSSEEECS
T ss_pred CCcCCCCC
Confidence 99999873
No 136
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.75 E-value=3.5e-09 Score=76.73 Aligned_cols=37 Identities=43% Similarity=0.993 Sum_probs=33.8
Q ss_pred CCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|...+|+|. +++|||..|+|||..||. |||||..|
T Consensus 4 ~~C~~~~F~C~-~g~CI~~~~~CDG~~DC~--DgSDE~~c 40 (45)
T 1d2l_A 4 PQCQPGEFACA-NSRCIQERWKCDGDNDCL--DNSDEAPA 40 (45)
T ss_dssp CBTTBTCEEET-TTEEECGGGTTTSSCTTT--TCSTTSTT
T ss_pred CcCCCCceEcC-CCCeEehhhccCCCCCCC--CCCCCCCC
Confidence 57888999998 899999999999999999 99999764
No 137
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.75 E-value=8.6e-06 Score=87.40 Aligned_cols=290 Identities=8% Similarity=0.036 Sum_probs=163.5
Q ss_pred ceEEEEecCCCcEEEEccCCc-eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQ-FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~-~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+++|++....+.|.+.++... ....+-......|.+++++|.++++|++... .+.|+..+++.......+.. .
T Consensus 11 ~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~--~~~i~~~d~~t~~~~~~~~~----~ 84 (349)
T 1jmx_B 11 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--YGDIYGIDLDTCKNTFHANL----S 84 (349)
T ss_dssp CEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT--TTEEEEEETTTTEEEEEEES----C
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC--CCcEEEEeCCCCcEEEEEEc----c
Confidence 889999999999999998754 4444332322369999999988889999866 68999999875443333331 1
Q ss_pred C-----CCCceeEEEeccCCEEEEEeCC-----------CCeEEEEEcCCCe-eE--EEEcCCCCCCcceEEEEe-cCeE
Q psy14257 492 R-----GAWPNGLTLDYQLTRIYWIDAK-----------SDSIHTVTYDGKD-HH--VVLSNHDSLTHPFAIALF-ENHV 551 (841)
Q Consensus 492 ~-----~~~P~glalD~~~~~LYw~d~~-----------~~~I~~~~~dG~~-~~--~i~~~~~~l~~P~gla~~-~~~l 551 (841)
. ...|.++++++.+++||++... .+.|..+++.... .+ ...... ..+.++++. ++.+
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~l 161 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP---RQVYLMRAADDGSL 161 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC---SSCCCEEECTTSCE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC---CcccceeECCCCcE
Confidence 1 2348999999988999998854 5789999987521 11 112221 246777774 4668
Q ss_pred EEEeCCCCeEEEEeccCCcceEEEeccc-CCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCc
Q psy14257 552 YWTDWRTNSVIRANKWNGSDVTLIQRTL-TQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKT 630 (841)
Q Consensus 552 Y~td~~~~~i~~~~~~~g~~~~~i~~~~-~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~t 630 (841)
|++. +.|..++..+++....+.... ..|.. ..|... .... .+.=.+ .-.-|.+..+..|+..
T Consensus 162 ~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~-~~~~~~----------~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 162 YVAG---PDIYKMDVKTGKYTVALPLRNWNRKGY--SAPDVL-YFWP-HQSPRH----------EFSMLYTIARFKDDKQ 224 (349)
T ss_dssp EEES---SSEEEECTTTCCEEEEECSTTCCCTTB--CCCBCC-CCCC-CCCTTC----------EEEEEEEEEEC-----
T ss_pred EEcc---CcEEEEeCCCCceeccccccccCCccc--cCccce-eeec-CCCcce----------eEEeeeeeeecCCCcC
Confidence 8864 348888877776554433211 00000 000000 0000 000000 0000111111111100
Q ss_pred ccc-cCceeEEe---ecCCeEEEEecCCCCccccceeecCCCCCceEEEEec-CCCEEEEEECCCCeEEEEEcccCceee
Q psy14257 631 CQV-ADSQFIIF---SRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDA-ANKKIYWTDQEYNEVKRSSIVGGQIQL 705 (841)
Q Consensus 631 C~~-~~~~~l~~---~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~-~~~~iyw~d~~~~~I~~~~~~g~~~~~ 705 (841)
-.. ....+.++ .....+..+.++ + .-..+.+++++| ..+.+|.+ .+.|+++++....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~--- 286 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEFA----------D--LTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRK--- 286 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEEE----------E--CSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTE---
T ss_pred CccccccceeEEEEeccCCcEEecccc----------c--CCCcceeeEecCCCCCEEEEE---cCeEEEEECccCe---
Confidence 000 00011111 111222222221 1 113567899999 88899988 6789999887644
Q ss_pred eeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcc
Q psy14257 706 VVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEY 773 (841)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~ 773 (841)
....+. .-..|.++++++.++.||.+ . ..++|.+++++...
T Consensus 287 -----------------------~~~~~~-~~~~~~~~~~s~dg~~l~~~--~-~~~~v~v~d~~~~~ 327 (349)
T 1jmx_B 287 -----------------------LIKAAN-LDHTYYCVAFDKKGDKLYLG--G-TFNDLAVFNPDTLE 327 (349)
T ss_dssp -----------------------EEEEEE-CSSCCCEEEECSSSSCEEEE--S-BSSEEEEEETTTTE
T ss_pred -----------------------EEEEEc-CCCCccceEECCCCCEEEEe--c-CCCeEEEEeccccc
Confidence 222222 22468999999999999997 3 35889999987543
No 138
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.74 E-value=2.6e-09 Score=77.33 Aligned_cols=38 Identities=47% Similarity=1.187 Sum_probs=32.7
Q ss_pred CCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 29 DRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 29 ~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
...|...+|+|. +++|||..|+|||..||. |+|||.+|
T Consensus 5 ~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~--DgSDE~~C 42 (44)
T 3a7q_B 5 AKECEKDQFQCR-NERCIPSVWRCDEDDDCL--DHSDEDDC 42 (44)
T ss_dssp ---CCTTEEECT-TSCEEEGGGTTSSSCCSS--SSTTTSCC
T ss_pred CCCCCCCceEcC-CCCEeChhhccCCCCCCC--CCccccCC
Confidence 357889999998 799999999999999999 99999776
No 139
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.74 E-value=1.6e-09 Score=80.47 Aligned_cols=38 Identities=42% Similarity=1.105 Sum_probs=34.5
Q ss_pred CCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 29 DRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 29 ~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
+..|.+++|+|. +++|||..|+|||..||. |||||.+|
T Consensus 4 p~~C~~~~F~C~-nG~CIp~~~~CDG~~DC~--DgSDE~~~ 41 (52)
T 2m0p_A 4 PASCLDTQYTCD-NHQCISKNWVCDTDNDCG--DGSDEKNC 41 (52)
T ss_dssp CCSSCSSEEECT-TCCEEETTSTTSSSCSSS--SCHHHHSC
T ss_pred CCCCCCCceECC-CCCEEecCccCCCCCCCC--CCCccccc
Confidence 467999999998 899999999999999999 99998765
No 140
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.73 E-value=3.2e-09 Score=78.22 Aligned_cols=38 Identities=45% Similarity=1.082 Sum_probs=33.9
Q ss_pred CCCCCCCcccCC----CCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNE----TLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~----~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|.+.+|+|.. +++|||..|+|||..||. |||||.+|
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~--DgSDE~~C 46 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCD--DGRDEWGC 46 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSS--SSTTTGGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCC--CCcccCCC
Confidence 568899999975 789999999999999999 99999876
No 141
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.73 E-value=2.2e-08 Score=93.07 Aligned_cols=95 Identities=23% Similarity=0.664 Sum_probs=76.1
Q ss_pred CcccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----ccccccCCCCC--CCcccCCCCcEEecCCCceecCCCCccc
Q psy14257 99 EFDCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DEKQCLRSDCH--HDCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 99 ~~~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~eC~~~~~~C~--~~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
...|.+. +.|++. ++.| .|+.||.+..| ++|.. .+|. ..|.++.++|+|.|++||. +..|+
T Consensus 12 ~~~C~~~-g~C~~~~g~~~C----~C~~Gy~G~~C~~~~~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C~ 80 (135)
T 2vj3_A 12 ANPCEHA-GKCINTLGSFEC----QCLQGYTGPRCEIDVNECVS--NPCQNDATCLDQIGEFQCICMPGYE----GVHCE 80 (135)
T ss_dssp SCSSSTT-CEEEECSSSEEE----ECCTTEESTTSCEECCTTTT--CCCCSSCEEEECSSCEEEECCTTEE----SSSSC
T ss_pred CCCCCCC-CEeECCCCCEEE----ECCCCCcCCcccccCccCCC--CCCCCCCEEeCCCCCceeeCCCCCc----CCcce
Confidence 3468776 899876 6789 89999987777 57763 4665 4899999999999999997 56786
Q ss_pred -cccccCCCCCcc--CceeecCCCCceEEeecCCeeecCCCCce
Q psy14257 171 -YLHPCEAWGTCS--QDCEPSVSNNSYKCTCHAGYELEPDMFTC 211 (841)
Q Consensus 171 -~~~eC~~~~~Cs--~~C~~~~~~g~~~C~C~~G~~l~~d~~~C 211 (841)
++++|. ..+|. ..|.++ .++|+|.|++||. +..|
T Consensus 81 ~~~~~C~-~~~C~~~g~C~~~--~g~~~C~C~~G~~----G~~C 117 (135)
T 2vj3_A 81 VNTDECA-SSPCLHNGRCLDK--INEFQCECPTGFT----GHLC 117 (135)
T ss_dssp EECCTTT-TCCSTTTCEEEEC--SSCEEEECCTTEE----SSSS
T ss_pred ecCCccc-CCCcCCCCEeECC--CCCeEEECCCCCc----CCcc
Confidence 788995 34675 489998 8999999999997 3466
No 142
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.72 E-value=4.1e-09 Score=78.24 Aligned_cols=38 Identities=42% Similarity=1.018 Sum_probs=34.0
Q ss_pred CCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|.+.+|+|..+++|||..|+|||..||. |||||..|
T Consensus 5 ~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~--DgSDE~~C 42 (50)
T 2knx_A 5 KTCGPSSFSCPGTHVCVPERWLCDGDKDCA--DGADESIA 42 (50)
T ss_dssp CTTCTTEEEETTTTEEEETTTTTSSSCCST--TCGGGSGG
T ss_pred CCCCCCcEEcCCCCeEcChhhcCCCCCCCC--CCCccccc
Confidence 568899999965899999999999999999 88888765
No 143
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.72 E-value=5.6e-09 Score=120.92 Aligned_cols=61 Identities=41% Similarity=0.861 Sum_probs=56.2
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
+||+..|+|||..||.|||||. +|.. |++.+|+|. ++.|++..++|||..||. |++||.+|
T Consensus 215 ~ci~~~~~Cdg~~dC~d~sDE~--~C~~--c~~~~~~C~-~~~C~~~~~~cdG~~dC~--~gsDE~~C 275 (565)
T 2xrc_A 215 KYISQMKACDGINDCGDQSDEL--CCKA--CQGKGFHCK-SGVCIPSQYQCNGEVDCI--TGEDEVGC 275 (565)
T ss_dssp CBCCTTSTTSSSCCSSSSSSSS--SBSS--CSSSCEEET-TTEEECGGGTTSSSCCSS--SCTTSSSC
T ss_pred CccCHHHcCCCcccCCCCcccc--cccc--cCCCceecC-CCcccCccccCCCcccCC--CCccccCc
Confidence 5999999999999999999999 7864 999999998 888999999999999999 88888664
No 144
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.68 E-value=5.1e-06 Score=89.19 Aligned_cols=266 Identities=9% Similarity=-0.034 Sum_probs=152.4
Q ss_pred eEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccc-cc
Q psy14257 265 VFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRS-PL 343 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~-~l 343 (841)
+|.+....++|++.++.++. ....+-......|.++++++.++.+|+ +. ..++.|.+++++..... .+
T Consensus 13 ~~v~~~~~~~v~~~d~~~~~--~~~~~~~~~~~~~~~~~~s~dg~~~~v--~~-------~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 13 YMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGPGTAMMAPDNRTAYV--LN-------NHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp EEEEEETTTEEEEEETTTTE--EEEEEECSSCCSSCEEEECTTSSEEEE--EE-------TTTTEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCeEEEEECCCCc--EEEEEecCCCCCCceeEECCCCCEEEE--Ee-------CCCCcEEEEeCCCCcEEEEE
Confidence 88888888999988877654 222222222226899999886654554 32 23468999988644332 22
Q ss_pred cccC-----cCCCceEEEEccCCEEEEEeCC-----------CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 344 VTKN-----IQWPSSLVIDYNQDILYWCDSH-----------LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 344 ~~~~-----~~~P~glavD~~~~~lYwaD~~-----------~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
.... ...|.++++++++++||++... .+.|..+++........... ...+..+ ..++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~-----~~~~ 154 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT--FPMPRQV-----YLMR 154 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--EECCSSC-----CCEE
T ss_pred EcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--ccCCCcc-----ccee
Confidence 2111 2348999999999999999854 57899999875322111000 0011100 0011
Q ss_pred cccccceEEEEecCCCcEEEEccCC-ceEEEEecCCCC-----------------------CceeEEEcCCC--------
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIAGDME-----------------------SPRAIALDPRF-------- 455 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~-----------------------~P~giavd~~~-------- 455 (841)
++.. ++||+++ +.|.++++.. +....+-..... .|.++++.+..
T Consensus 155 ~s~d-g~l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 230 (349)
T 1jmx_B 155 AADD-GSLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATAD 230 (349)
T ss_dssp ECTT-SCEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCE
T ss_pred ECCC-CcEEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccc
Confidence 2222 4488853 3488888854 444433222101 45556665331
Q ss_pred -CeEEE-EecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEec-cCCEEEEEeCCCCeEEEEEcCCCeeEEEE
Q psy14257 456 -GLLFW-TDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDY-QLTRIYWIDAKSDSIHTVTYDGKDHHVVL 532 (841)
Q Consensus 456 -g~Ly~-td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~-~~~~LYw~d~~~~~I~~~~~dG~~~~~i~ 532 (841)
+..|+ .+.. .+++....+ . ..-..|.++++++ .++.||++ .+.|..+++........+
T Consensus 231 ~~~~~~~~~~~--~~~~~~~~~---------~-----~~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~ 291 (349)
T 1jmx_B 231 LLYGYLSVDLK--TGKTHTQEF---------A-----DLTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAA 291 (349)
T ss_dssp EEEEEEEEETT--TCCEEEEEE---------E-----ECSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEE
T ss_pred cceeEEEEecc--CCcEEeccc---------c-----cCCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEE
Confidence 12222 2222 222222221 1 1234688999998 88899988 579999999865543333
Q ss_pred cCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 533 SNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 533 ~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
... ..|.++++. +.+||++ ...+.|..++..+++.+..+
T Consensus 292 ~~~---~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 292 NLD---HTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp ECS---SCCCEEEECSSSSCEEEE-SBSSEEEEEETTTTEEEEEE
T ss_pred cCC---CCccceEECCCCCEEEEe-cCCCeEEEEeccccceeeee
Confidence 321 357888885 3578886 44588888887776655444
No 145
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.68 E-value=3.2e-09 Score=78.48 Aligned_cols=40 Identities=38% Similarity=0.811 Sum_probs=35.4
Q ss_pred CCCCCCCCCCCcccCCCC-eEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 26 HCQDRKCDESHFTCNETL-RCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 26 ~C~~~~C~~~~~~C~~~~-~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
+|+ ..|.+.+|+|. ++ +||+..|+|||..||. |||||.+|
T Consensus 2 ~C~-~~C~~~~F~C~-~g~~CI~~~~~CDG~~DC~--DgSDE~~C 42 (48)
T 2i1p_A 2 AMV-LNCTSAQFKCA-DGSSCINSRYRCDGVYDCR--DNSDEAGC 42 (48)
T ss_dssp CSC-CCCCSSSEECS-SSSCEECGGGSSSSSCCSS--SSHHHHSS
T ss_pred CCC-CCCCCCeeECC-CCCEeCCHhhcCCCCCCCC--CCcccccC
Confidence 476 78999999998 56 8999999999999999 88888765
No 146
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.68 E-value=2.8e-06 Score=93.47 Aligned_cols=239 Identities=12% Similarity=0.059 Sum_probs=145.4
Q ss_pred cceeEEEecCCCeEEEEEecCC--cccceEEE----E--eCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEE
Q psy14257 262 ANMVFWTDVIDDKIYNATLIGN--SLSNIDVV----V--QTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKA 333 (841)
Q Consensus 262 ~~~lyw~d~~~~~I~~~~~~~~--~~~~~~~~----~--~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~ 333 (841)
++.||+.....++|+++++... .....+++ + ..++..|+++++-+.+ + |++..+... ....+.|...
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i--~Vs~~g~~~-g~~~g~v~vl 169 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--I--YISALGNEE-GEGPGGILML 169 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--E--EEEEEEETT-SCSCCEEEEE
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--E--EEEcCCCcC-CCCCCeEEEE
Confidence 4459999999999999987422 21122222 1 3366689988887654 4 446555421 2234678888
Q ss_pred ccC-CCcccccccc--CcCCCceEEEEccCCEEEEEeC------------------CCCeEEEEEecCCccEEEEeeeee
Q psy14257 334 GMH-GENRSPLVTK--NIQWPSSLVIDYNQDILYWCDS------------------HLNTVESVRVDGSERTVSFNLEVL 392 (841)
Q Consensus 334 ~~d-G~~~~~l~~~--~~~~P~glavD~~~~~lYwaD~------------------~~~~I~~~~ldG~~~~~~~~~~~~ 392 (841)
+.. ++.+..+-.. ....+..+.+.+..+.+|.++. ..++|..++++.......+.+...
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 876 4433333212 2233444666778999999973 478999999986533322222100
Q ss_pred cCCCccccCCCCCCccccccceEEEEec-----CCCcEEEEccCCc-eE--EEE-ecC-----C-----------CCCce
Q psy14257 393 GSDSRVGIPNCRPEDNLWIGKNLYWVES-----NLDQIEVAKLSGQ-FR--RTL-IAG-----D-----------MESPR 447 (841)
Q Consensus 393 ~~~~~~~i~~~~~~avdw~~~~LY~tD~-----~~~~I~v~~~~G~-~~--~~l-~~~-----~-----------l~~P~ 447 (841)
+ ..+..+ ..+++..++.+|++.. ..+.|.++..++. .. .++ +.. . -..|.
T Consensus 250 g-~~P~~i----~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 250 N-RMALEL----RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp E-EEEEEE----EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred C-Ccccee----EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 0 000000 0123455688999988 7888887766542 11 111 111 0 14689
Q ss_pred eEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccC-----------CCCCCceeEEEeccCCEEEEEe
Q psy14257 448 AIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLT-----------SRGAWPNGLTLDYQLTRIYWID 512 (841)
Q Consensus 448 giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~-----------~~~~~P~glalD~~~~~LYw~d 512 (841)
+|++++++++||+++++ .+.|..++.+ ....+.+....... .....|.+++|++++++||+++
T Consensus 325 ~I~lS~DGrfLYVSnrg--~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWG--IGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETT--TTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCC--CCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 99999999999999999 6788888874 43444443321110 0012699999999999999999
No 147
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.67 E-value=1.9e-07 Score=105.26 Aligned_cols=159 Identities=13% Similarity=0.174 Sum_probs=108.0
Q ss_pred cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeee-eec----CCCccccCCCCCCccccc---cceE
Q psy14257 344 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLE-VLG----SDSRVGIPNCRPEDNLWI---GKNL 415 (841)
Q Consensus 344 ~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~-~~~----~~~~~~i~~~~~~avdw~---~~~L 415 (841)
+...+..|.+|+++++ ++||+++...++|++++.++...+.+..+. .+. ....+|+ +++.. ++.|
T Consensus 22 ~a~~l~~P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgi------a~~Pdf~~~g~l 94 (454)
T 1cru_A 22 ILSNLNKPHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGF------AFHPDFKNNPYI 94 (454)
T ss_dssp EECCCSSEEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEE------EECTTTTTSCEE
T ss_pred EECCCCCceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEE------EECCCcCcCCEE
Confidence 3457889999999986 579999998889999987544344443322 111 1111122 23322 6999
Q ss_pred EEEecC------------CCcEEEEccCCc-----eEEEEec----CCCCCceeEEEcCCCCeEEEEecCC---------
Q psy14257 416 YWVESN------------LDQIEVAKLSGQ-----FRRTLIA----GDMESPRAIALDPRFGLLFWTDWDS--------- 465 (841)
Q Consensus 416 Y~tD~~------------~~~I~v~~~~G~-----~~~~l~~----~~l~~P~giavd~~~g~Ly~td~~~--------- 465 (841)
|++++. ..+|.++++++. ..++++. ...+.+.+|+++|+ |+||++....
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pD-G~Lyv~~Gd~~~~~~~~~~ 173 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPD-QKIYYTIGDQGRNQLAYLF 173 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTT-SCEEEEECCTTTTSGGGTT
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCC-CeEEEEECCCCCCCccccc
Confidence 999864 458888887542 2344442 23467999999985 8999995321
Q ss_pred ---------------------CCCeEEEecCCCCC----------cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC
Q psy14257 466 ---------------------KAPRIERCSMSGEH----------RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK 514 (841)
Q Consensus 466 ---------------------~~~~I~r~~ldG~~----------~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~ 514 (841)
..++|.|++.||+- +..+.. ..+..|.||++|+ +++||++|.+
T Consensus 174 ~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a-----~G~RNp~gla~dp-~G~L~~~d~g 247 (454)
T 1cru_A 174 LPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYT-----LGHRNPQGLAFTP-NGKLLQSEQG 247 (454)
T ss_dssp SCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEE-----BCCSEEEEEEECT-TSCEEEEEEC
T ss_pred cccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEE-----ECCCCcceEEECC-CCCEEEEecC
Confidence 14689999999982 223344 5889999999998 6999999975
Q ss_pred CC
Q psy14257 515 SD 516 (841)
Q Consensus 515 ~~ 516 (841)
.+
T Consensus 248 ~~ 249 (454)
T 1cru_A 248 PN 249 (454)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 148
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.66 E-value=5.2e-09 Score=77.11 Aligned_cols=38 Identities=45% Similarity=1.112 Sum_probs=34.3
Q ss_pred CCCCCCCcccCC----CCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNE----TLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~----~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|.+.+|+|.+ +++|||..|+|||..||. |||||.+|
T Consensus 3 ~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~--DgSDE~~C 44 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCD--DGRDEWGC 44 (47)
T ss_dssp CCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSS--SSCTTHHH
T ss_pred CCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCC--CCcccccC
Confidence 468899999985 689999999999999999 99999876
No 149
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.66 E-value=6.4e-09 Score=79.74 Aligned_cols=45 Identities=20% Similarity=0.382 Sum_probs=41.3
Q ss_pred ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccccccC
Q psy14257 132 DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
|||...++.|++.|.|++|+|+|.|++||.|.+|+++|.+++||.
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 578766788999999999999999999999999999999999983
No 150
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.66 E-value=3.4e-08 Score=113.33 Aligned_cols=104 Identities=29% Similarity=0.624 Sum_probs=83.5
Q ss_pred ccCCCCCeEecC---CCCCCCCCCCCCCCCC--ccc---ccccccCCCCCC-----CcccCCCCcEEe-cCCCceecC--
Q psy14257 101 DCQDVLRTCIPK---ALVCDGEPACFNGEDE--MFC---DEKQCLRSDCHH-----DCYNTPEGFMCV-CPRDMYLQP-- 164 (841)
Q Consensus 101 ~C~~~~~~Ci~~---~~~Cdg~~~C~~g~de--~~C---~eC~~~~~~C~~-----~C~~~~g~~~C~-C~~Gy~l~~-- 164 (841)
+|.++ +.|++. +|.|. .|+.||.+ ..| +||...++.|.+ .|.++.++|+|. |++||....
T Consensus 10 PC~~g-g~C~n~~~Gsy~C~---~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~ 85 (634)
T 1yo8_A 10 PCFPG-AQCSSFPDGSWSCG---FCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPV 85 (634)
T ss_dssp CSCTT-CCEEECTTSCEEEC---CCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCE
T ss_pred CCCCC-CEEecCCCCCeECC---cCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccc
Confidence 47665 788875 37783 59999965 568 799876667965 799999999998 999998643
Q ss_pred ---------CCCccccccccCC-CCCcc--CceeecCCC----CceEEeecCCeeecCCCCceE
Q psy14257 165 ---------DLITCSYLHPCEA-WGTCS--QDCEPSVSN----NSYKCTCHAGYELEPDMFTCK 212 (841)
Q Consensus 165 ---------d~~~C~~~~eC~~-~~~Cs--~~C~~~~~~----g~~~C~C~~G~~l~~d~~~C~ 212 (841)
+++.|++++||.. ..+|. ..|.++ . ++|+|.|++||.. ++..|.
T Consensus 86 g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt--~~~~~GsY~C~C~~Gy~G--dG~~Ce 145 (634)
T 1yo8_A 86 GVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYL--GHFSDPMYKCECQTGYAG--DGLICG 145 (634)
T ss_dssp ESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEEC--CTTCSSSEEEEECTTEEE--SSSSEE
T ss_pred cccccccccCCCcccccccccCCCcccccCcccccc--ccccccceeeeccCCccc--cCcccc
Confidence 5677999999974 46896 489998 7 8999999999984 456786
No 151
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.64 E-value=3.1e-06 Score=86.59 Aligned_cols=192 Identities=15% Similarity=0.020 Sum_probs=128.7
Q ss_pred ceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccC
Q psy14257 352 SSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS 431 (841)
Q Consensus 352 ~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~ 431 (841)
.||+++ +++||.+....+.|.++++.......-. +. ..... +.++..+++||.+.+..+.+.+++++
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~--~~~Fg--------eGit~~g~~Ly~ltw~~~~v~V~D~~ 124 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RL--GNIFA--------EGLASDGERLYQLTWTEGLLFTWSGM 124 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-EC--TTCCE--------EEEEECSSCEEEEESSSCEEEEEETT
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC--CCcce--------eEEEEeCCEEEEEEccCCEEEEEECC
Confidence 588887 6899999999999999999755433222 21 11111 12344569999999999999999986
Q ss_pred C-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEE
Q psy14257 432 G-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYW 510 (841)
Q Consensus 432 G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw 510 (841)
. +...++-.. ..+.||+-| ++.||.++ + ..+|...+...-....-+........+..++.|... +++||.
T Consensus 125 Tl~~~~ti~~~--~eGwGLt~D--g~~L~vSd-G--s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~--dG~lya 195 (268)
T 3nok_A 125 PPQRERTTRYS--GEGWGLCYW--NGKLVRSD-G--GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA--NGVIYA 195 (268)
T ss_dssp TTEEEEEEECS--SCCCCEEEE--TTEEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTEEEE
T ss_pred cCcEEEEEeCC--CceeEEecC--CCEEEEEC-C--CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe--CCEEEE
Confidence 4 445554432 346677765 67999999 4 579999987654333333322222345566777765 789999
Q ss_pred EeCCCCeEEEEEcCCCeeEEEEcCC-----------CCCCcceEEEEe--cCeEEEEeCCCCeEEEEe
Q psy14257 511 IDAKSDSIHTVTYDGKDHHVVLSNH-----------DSLTHPFAIALF--ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 511 ~d~~~~~I~~~~~dG~~~~~i~~~~-----------~~l~~P~gla~~--~~~lY~td~~~~~i~~~~ 565 (841)
.....+.|.++|+....+...+.-. ....-|-|||+. .++||+|-..=..++++.
T Consensus 196 nvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 196 NIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp EETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred EECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 9988999999999755443333211 112367899996 489999975545665553
No 152
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.64 E-value=0.0019 Score=74.40 Aligned_cols=363 Identities=13% Similarity=0.089 Sum_probs=203.6
Q ss_pred CceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEcc
Q psy14257 351 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKL 430 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~ 430 (841)
...+++.+++..|+.. ...+.|...+.+|.....+.... ..... +++... +.+.++-...+.|.+.+.
T Consensus 183 v~~~~~~~~~~~l~~~-~~d~~v~~w~~~~~~~~~~~~~~----~~v~~------~~~s~d-g~~l~~~~~d~~i~~w~~ 250 (577)
T 2ymu_A 183 VWGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTLTGHS----SSVRG------VAFSPD-GQTIASASDDKTVKLWNR 250 (577)
T ss_dssp EEEEEECTTSSCEEEE-ETTSEEEEECTTSCEEEEEECCS----SCEEE------EEECTT-SSCEEEEETTSCEEEECT
T ss_pred eeeeeecCCCCEEEEE-cCCCEEEEEeCCCcEEEEEecCC----CCEEE------EEECCC-CCEEEEEeCCCEEEEEeC
Confidence 3456666555544433 34556666666554433322100 00000 011111 334444445678888898
Q ss_pred CCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEE
Q psy14257 431 SGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYW 510 (841)
Q Consensus 431 ~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw 510 (841)
+++....+.. ......++++.|....|..... ...|...+.++.....+. ..-....++++.+.+..|..
T Consensus 251 ~~~~~~~~~~-~~~~v~~v~~~~d~~~l~~~~~---d~~i~~w~~~~~~~~~~~------~h~~~v~~~~~~~~~~~l~t 320 (577)
T 2ymu_A 251 NGQLLQTLTG-HSSSVNGVAFRPDGQTIASASD---DKTVKLWNRNGQLLQTLT------GHSSSVWGVAFSPDGQTIAS 320 (577)
T ss_dssp TSCEEEEECC-CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTSCEEEEEC------CCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEec-CCCCEEEEEEcCCCCEEEEEeC---CCEEEEEeCCCcEEEEEe------cCCCCeEEEEECCCCCEEEE
Confidence 8887766543 3456789999988666655443 456776677765444432 23345678999876666554
Q ss_pred EeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCC
Q psy14257 511 IDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGV 589 (841)
Q Consensus 511 ~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp 589 (841)
+ ...+.|...++++.....+... -....++++. ++....+-...+.|...+. +++....+....
T Consensus 321 ~-~~d~~i~~w~~~~~~~~~~~~~---~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~---------- 385 (577)
T 2ymu_A 321 A-SDDKTVKLWNRNGQHLQTLTGH---SSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS---------- 385 (577)
T ss_dssp E-ETTSCEEEEETTSCEEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCS----------
T ss_pred E-eCCCeEEEEeCCCCeeEEEeCC---CCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCC----------
Confidence 4 4467888889988877665432 2345677774 3444444445556655553 333222221100
Q ss_pred cccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEEEEecCCCCccccceeecCCC
Q psy14257 590 VKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIRGVDLEHPYYHTIPTISIPQV 668 (841)
Q Consensus 590 ~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~ 668 (841)
...++. .+.+|+ .+|+.+. ...|+..+.+... +..+ ....
T Consensus 386 ----------------------~~v~~~-----~~s~dg--------~~l~~~~~d~~v~~~~~~~~~---~~~~-~~~~ 426 (577)
T 2ymu_A 386 ----------------------SSVRGV-----AFSPDG--------QTIASASDDKTVKLWNRNGQL---LQTL-TGHS 426 (577)
T ss_dssp ----------------------SCEEEE-----EECTTS--------SCEEEEETTSEEEEECTTCCE---EEEE-ECCS
T ss_pred ----------------------CCeEEE-----EECCCC--------CEEEEEeCCCEEEEEeCCCCE---EEEe-cCCC
Confidence 001111 111121 2233332 2334444332211 1111 1122
Q ss_pred CCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeec
Q psy14257 669 FSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWI 748 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~ 748 (841)
..+.+|+|.|.++.|.... ..++|+..++++.. ... +......+..|++.+.
T Consensus 427 ~~v~~~~~s~d~~~l~~~~-~d~~v~~w~~~~~~--------------------------~~~-~~~~~~~v~~~~~spd 478 (577)
T 2ymu_A 427 SSVWGVAFSPDDQTIASAS-DDKTVKLWNRNGQL--------------------------LQT-LTGHSSSVRGVAFSPD 478 (577)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSEEEEEETTSCE--------------------------EEE-EECCSSCEEEEEECTT
T ss_pred CCeEEEEECCCCCEEEEEc-CCCEEEEEECCCCE--------------------------EEE-EcCCCCCEEEEEEcCC
Confidence 4567899999888777665 57888888876644 222 2334566789999998
Q ss_pred CCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEE
Q psy14257 749 AQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 828 (841)
Q Consensus 749 ~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l 828 (841)
++.|..+. ..++|.+.+++|+..+.+... -....+|++.|...+|.-.... +.|.--+++|.....+
T Consensus 479 ~~~las~~---~d~~i~iw~~~~~~~~~~~~h-------~~~v~~l~~s~dg~~l~s~~~d---g~v~lwd~~~~~~~~~ 545 (577)
T 2ymu_A 479 GQTIASAS---DDKTVKLWNRNGQLLQTLTGH-------SSSVRGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTL 545 (577)
T ss_dssp SCEEEEEE---TTSEEEEEETTSCEEEEEECC-------SSCEEEEEECTTSSCEEEEETT---SEEEEECTTSCEEEEE
T ss_pred CCEEEEEe---CCCEEEEEcCCCCEEEEEeCC-------CCCEEEEEEcCCCCEEEEEECc---CEEEEEeCCCCEEEEE
Confidence 87776663 467899999999877666543 3578899999987777655433 2566666777665555
Q ss_pred ec
Q psy14257 829 VS 830 (841)
Q Consensus 829 ~~ 830 (841)
..
T Consensus 546 ~~ 547 (577)
T 2ymu_A 546 TG 547 (577)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 153
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.63 E-value=3.5e-09 Score=101.84 Aligned_cols=104 Identities=21% Similarity=0.499 Sum_probs=72.1
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCC----Cccc---cc--ccccCCCC----CCCcccCCC----CcEEecCC---
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGED----EMFC---DE--KQCLRSDC----HHDCYNTPE----GFMCVCPR--- 158 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~d----e~~C---~e--C~~~~~~C----~~~C~~~~g----~~~C~C~~--- 158 (841)
.|.+ +.|++. +|.| .|++||. +..| ++ |......| ...|.++.+ +|.|.|++
T Consensus 11 ~C~~--~~C~n~~gsy~C----~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~ 84 (162)
T 1uzk_A 11 TCIS--GNCVNTPGSYIC----DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84 (162)
T ss_dssp SSBT--SEEEEETTEEEE----ECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred CCCC--CEeECCCCCEEE----eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence 4653 677765 7888 8999984 5667 34 65433333 346666554 45555544
Q ss_pred ------------------------CceecCCCCccccccccC-CCCCccC-ceeecCCCCceEEeecCCeeecCCCCceE
Q psy14257 159 ------------------------DMYLQPDLITCSYLHPCE-AWGTCSQ-DCEPSVSNNSYKCTCHAGYELEPDMFTCK 212 (841)
Q Consensus 159 ------------------------Gy~l~~d~~~C~~~~eC~-~~~~Cs~-~C~~~~~~g~~~C~C~~G~~l~~d~~~C~ 212 (841)
||.+.++++.|++++||. ..+.|.+ .|+++ .++|+|.|++||.+..++++|.
T Consensus 85 ~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~--~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 85 WGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINT--FGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp ETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEEC--SSCEEEECCTTCCBCTTTCBBC
T ss_pred cCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcC--CCCEEeeCCCCccCCCCCCccC
Confidence 566555667899999997 3467874 89999 9999999999999999888873
No 154
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.60 E-value=7.3e-09 Score=102.11 Aligned_cols=102 Identities=24% Similarity=0.639 Sum_probs=80.0
Q ss_pred cccCCCCCeEecC-------CCCCCCCCCCCCCCCCcc--c--ccccccCCCCC--CCcc----cCCCCcEEecCCCcee
Q psy14257 100 FDCQDVLRTCIPK-------ALVCDGEPACFNGEDEMF--C--DEKQCLRSDCH--HDCY----NTPEGFMCVCPRDMYL 162 (841)
Q Consensus 100 ~~C~~~~~~Ci~~-------~~~Cdg~~~C~~g~de~~--C--~eC~~~~~~C~--~~C~----~~~g~~~C~C~~Gy~l 162 (841)
..|.+. +.|++. ++.| .|..||.... | ++|.. .+|. ..|. ++.++|+|.|++||.+
T Consensus 54 ~~C~~~-~~C~~~~~~~~~g~y~C----~C~~G~~g~~~~C~~d~C~~--~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 54 XACGEF-GQCIENPDPAQVNMYXC----GCIEGYTLXEDTCVLDVCQY--XNCGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp SEEETT-EEEEECSSTTSSCSEEE----EECTTEEEETTEEEEGGGTT--CCCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred CCCCCC-CEeecCCCCcCCCCEEC----CCCCCCccCCCCCCCCcCcC--CCCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 467766 788764 4679 8999997653 5 77864 3575 3677 8999999999999997
Q ss_pred cC-CCCccccc--cccCCCCCc---cCceeecCCCCceEEeecCCeeecCCCCceE
Q psy14257 163 QP-DLITCSYL--HPCEAWGTC---SQDCEPSVSNNSYKCTCHAGYELEPDMFTCK 212 (841)
Q Consensus 163 ~~-d~~~C~~~--~eC~~~~~C---s~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~ 212 (841)
.+ +++.|+++ ++|.. +| ...|+++ .++|+|.|++||.+........
T Consensus 127 ~~~~~~~C~~~~~~~C~~--~C~~~~~~C~n~--~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 127 NPEDEXXCTXTGETACQL--XCNTDNEVCXNV--EGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp ETTTTTEEEEEECCCCCC--CCCTTTEEEEEE--TTEEEEEECTTCEEETTTTEEE
T ss_pred cCCCCCcceEcCCCcccc--cccccCcceecC--CCCeeeECCCCCccCcccccCC
Confidence 65 78999976 78963 78 3489999 9999999999999887665543
No 155
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.60 E-value=9.8e-06 Score=82.17 Aligned_cols=194 Identities=11% Similarity=-0.045 Sum_probs=127.8
Q ss_pred CceEEEEccCCEEEEEeCCC--CeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEE
Q psy14257 351 PSSLVIDYNQDILYWCDSHL--NTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVA 428 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~~~--~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~ 428 (841)
=.||++|. ++||.+.... .+|.++++.......-..+. ..... ++++..+++||...+..+.+.++
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~--~~~fg--------eGi~~~~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVP--PPYFG--------AGIVAWRDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECC--TTCCE--------EEEEEETTEEEEEESSSSEEEEE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCC--CCcce--------eEEEEeCCEEEEEEeeCCEEEEE
Confidence 35999985 8999997764 59999999766544333221 11111 23344569999999999999999
Q ss_pred ccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCE
Q psy14257 429 KLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTR 507 (841)
Q Consensus 429 ~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~ 507 (841)
+++. +...++-.. ..+.||+- .++.||.+| + ..+|...+...-....-+........+..++.|... +++
T Consensus 91 D~~tl~~~~ti~~~--~~Gwglt~--dg~~L~vSd-g--s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~--~G~ 161 (243)
T 3mbr_X 91 DLATLTPRARFRYP--GEGWALTS--DDSHLYMSD-G--TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV--NGE 161 (243)
T ss_dssp ETTTTEEEEEEECS--SCCCEEEE--CSSCEEEEC-S--SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE--TTE
T ss_pred ECCcCcEEEEEeCC--CCceEEee--CCCEEEEEC-C--CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe--CCE
Confidence 9864 455554433 35666665 468999999 4 578999887644333333321112234556666654 799
Q ss_pred EEEEeCCCCeEEEEEcCCCeeEEEEcCC-----------CCCCcceEEEEe--cCeEEEEeCCCCeEEEEe
Q psy14257 508 IYWIDAKSDSIHTVTYDGKDHHVVLSNH-----------DSLTHPFAIALF--ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 508 LYw~d~~~~~I~~~~~dG~~~~~i~~~~-----------~~l~~P~gla~~--~~~lY~td~~~~~i~~~~ 565 (841)
||......+.|.++|+....+.-.+... ....-|-|||+. .++||+|-..=..++++.
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~ 232 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIR 232 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEE
Confidence 9999988999999999765543333211 122467899996 489999975545666554
No 156
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.59 E-value=5.4e-08 Score=87.37 Aligned_cols=65 Identities=25% Similarity=0.605 Sum_probs=57.1
Q ss_pred CcccCCCCcEEecCCCceecCCCCccccc---cccC-CCCCccCceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 144 DCYNTPEGFMCVCPRDMYLQPDLITCSYL---HPCE-AWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 144 ~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~---~eC~-~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
.|+++.++|+|.|++||. +..|+++ ++|. ..+.|.+.|.++ .++|+|.|++||.+..+++.|.+.
T Consensus 27 ~C~~~~~~y~C~C~~G~~----G~~C~~~~~~~~C~~~~~~C~~~C~n~--~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 27 TCIDGIGSFSCDCRSGWE----GRFCQREVSFLNCSLDNGGCTHYCLEE--VGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp EECCCSSCCCEEECTTEE----STTSCEECCSSSSSSGGGGCSSEEEEC--SSSEEEECCTTEEECTTSSCEEEC
T ss_pred CCCCCCCCcEeeCCCCCc----CCCcCcCCcCCcCcCCCCCCCCEeECC--CCCEEeECCCCeeECCCCCccCcC
Confidence 789999999999999997 5568875 4686 357898999999 999999999999999999999887
No 157
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.57 E-value=1e-08 Score=74.25 Aligned_cols=37 Identities=54% Similarity=1.255 Sum_probs=33.8
Q ss_pred CCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 30 ~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
..|.+.+|+|. +++|||..|+|||..||. |+|||..|
T Consensus 3 ~~C~~~~F~C~-~g~CI~~~~~CDg~~DC~--DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHA 39 (44)
T ss_dssp SSSCTTEEECT-TSCEEEGGGTTSSSCCSS--SSGGGSHH
T ss_pred CCCCCCceEeC-CCCeEecCcccCCCCCCC--CCCCCCCc
Confidence 46889999998 889999999999999999 99999764
No 158
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.56 E-value=3e-08 Score=76.91 Aligned_cols=51 Identities=18% Similarity=0.402 Sum_probs=44.7
Q ss_pred ccccCCCCCCCcccCC-CCcEEecCCCceecCCCCccccccccCCCCCccCceeec
Q psy14257 134 KQCLRSDCHHDCYNTP-EGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPS 188 (841)
Q Consensus 134 C~~~~~~C~~~C~~~~-g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~ 188 (841)
|...++.|+|.|.|++ |+|.|.|++||.|.+|+++|.++++ .+|.+.|.|.
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~----~pC~~~c~n~ 53 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP----FPCGRVSVSQ 53 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSS----SCTTCCCSCC
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC----CCCCCccccc
Confidence 5556789999999999 6999999999999999999999754 5788999876
No 159
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.55 E-value=1.4e-06 Score=99.19 Aligned_cols=271 Identities=12% Similarity=0.035 Sum_probs=160.3
Q ss_pred eeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEe--eecCceeEEEeeecCCCC----------CCCCCCEE
Q psy14257 264 MVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVD--WIGKNLYMFWAFWSLSPS----------NSSDGGIE 331 (841)
Q Consensus 264 ~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD--~~~~~~y~~~td~~~~~~----------~~~~~~I~ 331 (841)
.||+.|..+++|.|++++... ..+.+-......|+|+++. |.+ .|+|.+.-...|- +...+.+.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~--~~~ii~ip~g~~phg~~~~~~p~~--~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMK--CDAILEIPNAKGIHGLRPQKWPRS--NYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTE--EEEEEECSSCCSEEEEEECCSSBC--SEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCce--EeeEEeCCCCCCCcceeeeecCCC--cEEEEecccccccCCCCcccccccccCceEE
Confidence 499999999999999987543 1222222233579999984 544 6676664221110 11233566
Q ss_pred EEccCCCccccccccCc-CCCceEEEEccCCEEEEEeCCC--------------CeEEEEEe--------cCCccEEEEe
Q psy14257 332 KAGMHGENRSPLVTKNI-QWPSSLVIDYNQDILYWCDSHL--------------NTVESVRV--------DGSERTVSFN 388 (841)
Q Consensus 332 ~~~~dG~~~~~l~~~~~-~~P~glavD~~~~~lYwaD~~~--------------~~I~~~~l--------dG~~~~~~~~ 388 (841)
.++.+.. +++..-.+ +.|.+++++++++++|++..+. ..|..++. +|+... +-.
T Consensus 179 vID~~t~--~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~-i~~ 255 (595)
T 1fwx_A 179 AVDADKW--EVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE-LNG 255 (595)
T ss_dssp EEETTTT--EEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE-ETT
T ss_pred EEECCCC--eEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE-ECc
Confidence 6666532 22221111 3899999999999999999876 33444442 332211 111
Q ss_pred eeeecCCC----c--cccC---CCCCCccccccceEEEEecCCCcEEEEccCCce------------EEEEecCCCCCce
Q psy14257 389 LEVLGSDS----R--VGIP---NCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQF------------RRTLIAGDMESPR 447 (841)
Q Consensus 389 ~~~~~~~~----~--~~i~---~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~------------~~~l~~~~l~~P~ 447 (841)
+.++.... . .-++ ....++++..++.+|+++...++|.+++++... ...-+..+ ..|+
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG-~gP~ 334 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG-LGPL 334 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC-SCEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC-CCcc
Confidence 11111110 0 0011 122345667789999999999999999988431 11112222 4799
Q ss_pred eEEEcCCCCeEEEEecCCCCCeEEEecCCC-------CC-cEEEEEeccc--CCCCCCceeEEEeccCCEEEEEeCCC-C
Q psy14257 448 AIALDPRFGLLFWTDWDSKAPRIERCSMSG-------EH-RSVIVRVDLL--TSRGAWPNGLTLDYQLTRIYWIDAKS-D 516 (841)
Q Consensus 448 giavd~~~g~Ly~td~~~~~~~I~r~~ldG-------~~-~~~i~~~~~~--~~~~~~P~glalD~~~~~LYw~d~~~-~ 516 (841)
.++++++. ++|.+.+- .++|.+.+++. .. ..++-..... +.....+.|+++.++++.||.++... +
T Consensus 335 h~aF~~dG-~aY~t~~l--dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 335 HTAFDGRG-NAYTSLFL--DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp EEEECTTS-EEEEEETT--TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred eEEECCCC-eEEEEEec--CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 99999975 99999987 68888888764 11 3333332110 00122336778888999999999766 6
Q ss_pred eE-----------EEEEcCCCeeEEEEcCCCCCCcceEEEE
Q psy14257 517 SI-----------HTVTYDGKDHHVVLSNHDSLTHPFAIAL 546 (841)
Q Consensus 517 ~I-----------~~~~~dG~~~~~i~~~~~~l~~P~gla~ 546 (841)
++ +.++..|...+.+.... ....|..+.+
T Consensus 412 r~~~~gp~~~~~~ql~dis~~~m~lv~d~p-~~~ePh~~~i 451 (595)
T 1fwx_A 412 RFLNVGPLKPENDQLIDISGDKMVLVHDGP-TFAEPHDAIA 451 (595)
T ss_dssp SSCCCCSSCCEEEEEEECSSSSCEEEEEEE-ESSCCCCEEE
T ss_pred ccccCCCCCCCcceEEEcCCCcEEEEEEEc-CCCCCCceEE
Confidence 66 77777766555554332 2445554444
No 160
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.55 E-value=2.4e-08 Score=97.74 Aligned_cols=75 Identities=27% Similarity=0.626 Sum_probs=36.4
Q ss_pred ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCcccc-c-cccCC-CCCccCceeecCCCCceEEeecCCeeecC
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSY-L-HPCEA-WGTCSQDCEPSVSNNSYKCTCHAGYELEP 206 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~-~-~eC~~-~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~ 206 (841)
++|. ..+|.+ .|.++.++|.|.|++||. |+.|.+ + ++|.. .+.|.+.|.++ .++|.|.|++||.+..
T Consensus 43 deC~--~~pC~ngg~C~n~~g~y~C~C~~Gf~----G~~Ce~~i~deC~~~~~~C~~~C~n~--~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 43 DQCE--TSPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEE--QNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSSEEEEE--TTEEEEECCTTEEECT
T ss_pred cccC--CCCCCCCCEeECCCCCeeEeCCCCce----eccccccccccccCCCCCCCCEeECC--CCCeEEECCCCceeCC
Confidence 5676 346865 899999999999999997 778987 5 89974 46899999999 9999999999999999
Q ss_pred CCCceEeC
Q psy14257 207 DMFTCKSK 214 (841)
Q Consensus 207 d~~~C~~~ 214 (841)
++..|.++
T Consensus 115 dG~~C~~~ 122 (195)
T 1nfu_B 115 NGKACIPT 122 (195)
T ss_dssp TSSCEEES
T ss_pred CCCccccC
Confidence 99999987
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.53 E-value=0.00089 Score=83.75 Aligned_cols=416 Identities=10% Similarity=0.014 Sum_probs=219.2
Q ss_pred CeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCc----
Q psy14257 273 DKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNI---- 348 (841)
Q Consensus 273 ~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~---- 348 (841)
+.|+..+++++. ...+ ...-.....+++.|.++.+.+ +.... .......|+.++++|...+.+.....
T Consensus 33 ~~l~~~~~~gg~---~~~l-t~~~~~v~~~~~SPDG~~la~--~s~~~--~~~~~~~i~~~d~~~g~~~~lt~~~~~~~~ 104 (1045)
T 1k32_A 33 DDLWEHDLKSGS---TRKI-VSNLGVINNARFFPDGRKIAI--RVMRG--SSLNTADLYFYNGENGEIKRITYFSGKSTG 104 (1045)
T ss_dssp TEEEEEETTTCC---EEEE-ECSSSEEEEEEECTTSSEEEE--EEEES--TTCCEEEEEEEETTTTEEEECCCCCEEEET
T ss_pred CcEEEEECCCCc---EEEe-eeCCCcccCeEECCCCCEEEE--EEeec--cCCCCCeEEEEECCCCCeEEcccCCCcccc
Confidence 456666665543 1222 222223455666665543332 21110 00122368888887765554432111
Q ss_pred --CCCceEEEEccCCEEEEEeC-----CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEe--
Q psy14257 349 --QWPSSLVIDYNQDILYWCDS-----HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVE-- 419 (841)
Q Consensus 349 --~~P~glavD~~~~~lYwaD~-----~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD-- 419 (841)
....++++.++++.+|.++. ....|+.++++|+..+.+..... ..+.|..+.||...
T Consensus 105 ~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~--------------~~~~~spG~l~~~~~~ 170 (1045)
T 1k32_A 105 RRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPA--------------THILFADGRRVIGRNT 170 (1045)
T ss_dssp TEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSC--------------SEEEEETTEEEEEESC
T ss_pred cccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCc--------------ceeeeCCCEEEEeccC
Confidence 11267889888885555543 23579999998876554322110 00011112222210
Q ss_pred -----------cCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 420 -----------SNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 420 -----------~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
....+|+.....|. .+.+ ...-.....+++++. .+|++.......+|++.+++|...+.+..
T Consensus 171 ~~~~~~~~~~g~~~~~lw~~~~~~~-~~~l-~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~~~g~~~~~l~~--- 243 (1045)
T 1k32_A 171 FELPHWKGYRGGTRGKIWIEVNSGA-FKKI-VDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTDLDGKDLRKHTS--- 243 (1045)
T ss_dssp SCCTTSTTCCSTTCCEEEEEEETTE-EEEE-ECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEETTSCSCEECCC---
T ss_pred CCccccccccCCCcCCEEEECCCCC-eEEC-cCCCCcccceEEeCC--EEEEEEeccCceEEEEEeCCCCcceEecC---
Confidence 11234444333332 3333 333455677888765 55555432236789999998877665543
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC--------CCCcceEEEEe-c--CeEEEEeCC
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD--------SLTHPFAIALF-E--NHVYWTDWR 557 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~--------~l~~P~gla~~-~--~~lY~td~~ 557 (841)
......+++.+.+++|.++. .+.|+..++.+.....+..... ....+..+++. . .+|.++.
T Consensus 244 ----~~~~~~~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-- 315 (1045)
T 1k32_A 244 ----FTDYYPRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-- 315 (1045)
T ss_dssp ----CCSSCEEEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--
T ss_pred ----CCCcceeeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--
Confidence 11234567877777777764 5688888886554442221100 00123455554 2 3455544
Q ss_pred CCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCce
Q psy14257 558 TNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQ 637 (841)
Q Consensus 558 ~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~ 637 (841)
.+.|+.++..++.... +... ....... .... |+ ..
T Consensus 316 ~~~i~~~~~~~~~~~~-~~~~-------------------------------~~~~~~~-----~~~s-dg-------~~ 350 (1045)
T 1k32_A 316 RGQAFIQDVSGTYVLK-VPEP-------------------------------LRIRYVR-----RGGD-TK-------VA 350 (1045)
T ss_dssp TTEEEEECTTSSBEEE-CSCC-------------------------------SCEEEEE-----ECSS-SE-------EE
T ss_pred cCEEEEEcCCCCceEE-ccCC-------------------------------CcceEEe-----eeEc-CC-------Ce
Confidence 3455555544333111 1000 0000000 0000 11 11
Q ss_pred eEEeecCCeEE-EEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecc
Q psy14257 638 FIIFSRPREIR-GVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLT 716 (841)
Q Consensus 638 ~l~~~~~~~i~-~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 716 (841)
+++.+....++ .++++..... .+. .....+..++|.|..+.|+++. ..+.|+.+++.+..
T Consensus 351 l~~~s~~~~l~~~~d~~~~~~~---~l~-~~~~~~~~~~~SpDG~~la~~~-~~~~v~~~d~~tg~-------------- 411 (1045)
T 1k32_A 351 FIHGTREGDFLGIYDYRTGKAE---KFE-ENLGNVFAMGVDRNGKFAVVAN-DRFEIMTVDLETGK-------------- 411 (1045)
T ss_dssp EEEEETTEEEEEEEETTTCCEE---ECC-CCCCSEEEEEECTTSSEEEEEE-TTSEEEEEETTTCC--------------
T ss_pred EEEEECCCceEEEEECCCCCce---Eec-CCccceeeeEECCCCCEEEEEC-CCCeEEEEECCCCc--------------
Confidence 22222334555 5555443211 111 2234578899999999999887 45789999987655
Q ss_pred cccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCC-------CCCeEEEEecCCcceEEEEcCCCCCCCcCC
Q psy14257 717 PLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSP-------TQSKIVVCNLEGEYQTTILSNESNDTSTLS 789 (841)
Q Consensus 717 ~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~-------~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~ 789 (841)
...++......+.++++.+.++.|.++..+. ....|.+.++++.....+... ..
T Consensus 412 ------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~-------~~ 472 (1045)
T 1k32_A 412 ------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE-------NS 472 (1045)
T ss_dssp ------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCS-------SS
T ss_pred ------------eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCC-------Cc
Confidence 3444444555668999999999998884321 235899999987654444333 45
Q ss_pred CceEEEEeCCCCeEEEEec
Q psy14257 790 KISSIAVWPVKGKMFWSNV 808 (841)
Q Consensus 790 ~p~~iavd~~~g~lyw~d~ 808 (841)
.+..++..|...+|||...
T Consensus 473 ~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 473 HDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp BEEEEEECTTSCEEEEEES
T ss_pred ccCCceEcCCCCEEEEEec
Confidence 6788999999889999875
No 162
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.52 E-value=2.9e-08 Score=74.60 Aligned_cols=42 Identities=17% Similarity=0.324 Sum_probs=38.5
Q ss_pred ccccCCCCCCCcccCCCCcEEecCCCceecCCCCcccccccc
Q psy14257 134 KQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 134 C~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
|...++.|+|.|.|++|+|+|.|++||.|.+|+++|.+++||
T Consensus 1 C~~~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 1 CSLDNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp CCTTTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CCCCCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 444577899999999999999999999999999999999987
No 163
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.50 E-value=3.2e-08 Score=79.30 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=41.5
Q ss_pred ccccccCCCCCCCcccCCC-CcEEecCCCceecCCCCccccccccC
Q psy14257 132 DEKQCLRSDCHHDCYNTPE-GFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~~g-~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
+||...++.|+|.|.|++| +|.|.|++||.|.+|+++|.+++||.
T Consensus 6 ~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 6 LICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred ccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 5787778899999999999 89999999999999999999999983
No 164
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.50 E-value=0.00018 Score=77.93 Aligned_cols=265 Identities=13% Similarity=0.075 Sum_probs=162.5
Q ss_pred CCceeEEEcCCCCeEEEEecCC---CCCeEEEecCCC------CCcEEEEEec--ccCCCCCCceeEEEeccCCEEEEEe
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDS---KAPRIERCSMSG------EHRSVIVRVD--LLTSRGAWPNGLTLDYQLTRIYWID 512 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~---~~~~I~r~~ldG------~~~~~i~~~~--~~~~~~~~P~glalD~~~~~LYw~d 512 (841)
.-|.||++|..+|+||+|-..- ...++-.+..+. .....+..-. .....|..+.++.+|. .+||++.|
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD~-~~rLWVLD 104 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVIDD-CRRLWVVD 104 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEECT-TCEEEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEcC-CCcEEEEe
Confidence 4699999975569999996331 123454444321 1111101100 0113577889999994 79999999
Q ss_pred CCC---------------CeEEEEEcCCC--e-eEEEEcCCCCC---CcceEEEEe---------cCeEEEEeCCCCeEE
Q psy14257 513 AKS---------------DSIHTVTYDGK--D-HHVVLSNHDSL---THPFAIALF---------ENHVYWTDWRTNSVI 562 (841)
Q Consensus 513 ~~~---------------~~I~~~~~dG~--~-~~~i~~~~~~l---~~P~gla~~---------~~~lY~td~~~~~i~ 562 (841)
.+. -+|..+|+... . .+++.-....+ ..--.|+++ ++++|+||.....|+
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLI 184 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALF 184 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEE
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEE
Confidence 762 27889999865 3 33332211111 123456676 578999999999999
Q ss_pred EEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee
Q psy14257 563 RANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS 642 (841)
Q Consensus 563 ~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~ 642 (841)
.++..+|+...+....+. + | ..+.+..
T Consensus 185 Vydl~~~~swRv~~~~~~-----------------------------p----------------d--------~~~~~~i 211 (381)
T 3q6k_A 185 IYDHKKQDSWNVTHPTFK-----------------------------A----------------E--------RPTKFDY 211 (381)
T ss_dssp EEETTTTEEEEEECGGGS-----------------------------C----------------C--------SCEEEEE
T ss_pred EEECCCCcEEEEccCCCc-----------------------------c----------------c--------cCcceEE
Confidence 999988887776532110 0 0 0000111
Q ss_pred cCCeEEEEecCCCCccccceeecCCCCCceEEEEecC----CCEEEEEECCCCeEEEEEcc---cCceeeeeeeeeeeec
Q psy14257 643 RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAA----NKKIYWTDQEYNEVKRSSIV---GGQIQLVVDAVFEFYL 715 (841)
Q Consensus 643 ~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~----~~~iyw~d~~~~~I~~~~~~---g~~~~~~~~~~~~~~~ 715 (841)
.+... . + ...+.+|+.+|. .+.|||.-..+.+++++... ...
T Consensus 212 ~G~~~-~--~---------------~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~------------- 260 (381)
T 3q6k_A 212 GGKEY-E--F---------------KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKG------------- 260 (381)
T ss_dssp TTEEE-E--E---------------CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTT-------------
T ss_pred CCEEe-E--e---------------ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcc-------------
Confidence 11100 0 0 012345666665 78999999888899998732 111
Q ss_pred ccccccccccCceEEEEeeCC-CCCcceeEEeecCCcEEEEecCCCCCeEEEEecCC-c----ceEEEEcCCCCCCCcCC
Q psy14257 716 TPLSKRSSIVGGQIQLVVDAG-ISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEG-E----YQTTILSNESNDTSTLS 789 (841)
Q Consensus 716 ~~~~~~~~~~~~~~~~i~~~~-~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g-~----~~~~~~~~~~~~~~~l~ 789 (841)
...+.+.+-..+ .....++|+|..+++||++ +...+.|...+.++ . ...+++.+ . .|.
T Consensus 261 ---------~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~--~~~~~aI~~w~~~~~~~~~~n~~~l~~d----~-~l~ 324 (381)
T 3q6k_A 261 ---------GKLNPELLGNRGKYNDAIALAYDPKTKVIFFA--EANTKQVSCWNTQKMPLRMKNTDVVYTS----S-RFV 324 (381)
T ss_dssp ---------CCCCCEEEEECCTTCCEEEEEECTTTCEEEEE--ESSSSEEEEEETTSCSBCGGGEEEEEEC----T-TCC
T ss_pred ---------hhhceEEeeecCCCCCcceEEEeCCCCeEEEE--eccCCeEEEEeCCCCccccCceEEEEEC----C-Ccc
Confidence 011123332222 2344578999778899999 56889999999998 3 45677765 1 389
Q ss_pred CceEEEEeCCCCeEEEEecCC
Q psy14257 790 KISSIAVWPVKGKMFWSNVTK 810 (841)
Q Consensus 790 ~p~~iavd~~~g~lyw~d~~~ 810 (841)
.|.+|+|++ .|+||++...-
T Consensus 325 ~pd~~~i~~-~g~Lwv~sn~l 344 (381)
T 3q6k_A 325 FGTDISVDS-KGGLWFMSNGF 344 (381)
T ss_dssp SEEEEEECT-TSCEEEEECSC
T ss_pred ccCeEEECC-CCeEEEEECcc
Confidence 999999996 57999987543
No 165
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.49 E-value=1.4e-08 Score=95.96 Aligned_cols=102 Identities=20% Similarity=0.494 Sum_probs=73.2
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCC----cccc--------------cccccCCCCC--CCcccCCCC-------
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDE----MFCD--------------EKQCLRSDCH--HDCYNTPEG------- 151 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de----~~C~--------------eC~~~~~~C~--~~C~~~~g~------- 151 (841)
+|.+ +.|++. +|.| .|++||.. ..|. .|......|. ..|.++.++
T Consensus 11 pC~n--g~C~n~~g~y~C----~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~ 84 (147)
T 2w86_A 11 PCIN--GVCKNSPGSFIC----ECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCT 84 (147)
T ss_dssp CSBT--SEEEEETTEEEE----ECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTE
T ss_pred CCCC--CEeECCCCCEEe----ECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcc
Confidence 4665 677765 7888 89999843 2231 2221111221 134455544
Q ss_pred ---cEEecCCCceecCCCCccccccccC-CCCCccC-ceeecCCCCceEEeecCCeeecCCCCce
Q psy14257 152 ---FMCVCPRDMYLQPDLITCSYLHPCE-AWGTCSQ-DCEPSVSNNSYKCTCHAGYELEPDMFTC 211 (841)
Q Consensus 152 ---~~C~C~~Gy~l~~d~~~C~~~~eC~-~~~~Cs~-~C~~~~~~g~~~C~C~~G~~l~~d~~~C 211 (841)
|.|.|++||.+ .+++.|++++||. .++.|.+ .|+++ .++|+|.|++||.+..++++|
T Consensus 85 ~c~~~C~C~~Gy~~-~~g~~C~dideC~~~~~~C~~g~C~n~--~g~y~C~C~~Gy~g~~~~~~C 146 (147)
T 2w86_A 85 LCQVDPICGKGYSR-IKGTQCEDIDECEVFPGVCKNGLCVNT--RGSFKCQCPSGMTLDATGRIC 146 (147)
T ss_dssp ECCCCTTTCTTEEE-EETTEEEECCHHHHSTTCSSSSEEEEE--TTEEEEECCTTCCBCTTSSCB
T ss_pred cCCCcccCCCcccc-CCCCccCccccccCCCCCCCCCEEECC--CCCEEeeCCCCCccCCCCCee
Confidence 78899999986 3688999999997 4567875 89999 999999999999999888887
No 166
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.48 E-value=5.7e-08 Score=89.90 Aligned_cols=75 Identities=27% Similarity=0.624 Sum_probs=36.0
Q ss_pred ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCcccc-c-cccCC-CCCccCceeecCCCCceEEeecCCeeecC
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSY-L-HPCEA-WGTCSQDCEPSVSNNSYKCTCHAGYELEP 206 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~-~-~eC~~-~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~ 206 (841)
++|.. .+|.+ .|.++.++|+|.|++||. |..|.+ + ++|.. .+.|.+.|.++ .++|+|.|++||.+..
T Consensus 43 d~C~~--~pC~n~g~C~~~~~~y~C~C~~G~~----G~~C~~~i~d~C~~~~~~C~~~C~~~--~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 43 DQCET--SPCQNQGKCKDGLGEYTCTCLEGFE----GKNCELFTRKLCSLDNGDCDQFCHEE--QNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSSEEEEE--TTEEEEECCTTEEECT
T ss_pred CcCCC--CCCCCcCCcccCCCCEEeeCCCCcc----CCccccCCCCccccCCCCCCCEeECC--CCCEEEECCCCcEECC
Confidence 56652 36764 899999999999999997 678987 5 88974 46798899999 9999999999999999
Q ss_pred CCCceEeC
Q psy14257 207 DMFTCKSK 214 (841)
Q Consensus 207 d~~~C~~~ 214 (841)
+++.|.++
T Consensus 115 ~g~~C~~~ 122 (134)
T 2vh0_B 115 NGKACIPT 122 (134)
T ss_dssp TSSCEEES
T ss_pred CCCccCcC
Confidence 99999887
No 167
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.47 E-value=4.5e-08 Score=74.15 Aligned_cols=42 Identities=17% Similarity=0.309 Sum_probs=38.7
Q ss_pred ccccCCCCCCCcccCCC-CcEEecCCCceecCCCCcccccccc
Q psy14257 134 KQCLRSDCHHDCYNTPE-GFMCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 134 C~~~~~~C~~~C~~~~g-~~~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
|...++.|+|.|.|+++ +|+|.|++||.|.+|+++|.+++||
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 55567889999999999 7999999999999999999999998
No 168
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.44 E-value=0.0014 Score=81.92 Aligned_cols=313 Identities=13% Similarity=0.048 Sum_probs=166.6
Q ss_pred eEEeccCccccccccccccEEEEeccccceeeecccccCCcceeEEEec-----CCCeEEEEEecCCcccceEEEEeCCC
Q psy14257 222 FVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDV-----IDDKIYNATLIGNSLSNIDVVVQTGL 296 (841)
Q Consensus 222 ~ll~s~~~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~-----~~~~I~~~~~~~~~~~~~~~~~~~~l 296 (841)
.+.|+....|+..++++.....+......+..+.|.++... |.++.. ....|+..++.++. ... +...-
T Consensus 26 ~iaf~~~~~l~~~~~~gg~~~~lt~~~~~v~~~~~SPDG~~--la~~s~~~~~~~~~~i~~~d~~~g~---~~~-lt~~~ 99 (1045)
T 1k32_A 26 RIIFVCCDDLWEHDLKSGSTRKIVSNLGVINNARFFPDGRK--IAIRVMRGSSLNTADLYFYNGENGE---IKR-ITYFS 99 (1045)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEECSSSEEEEEEECTTSSE--EEEEEEESTTCCEEEEEEEETTTTE---EEE-CCCCC
T ss_pred EEEEEECCcEEEEECCCCcEEEeeeCCCcccCeEECCCCCE--EEEEEeeccCCCCCeEEEEECCCCC---eEE-cccCC
Confidence 56676667888888888777766654455677778775444 776632 33478888777653 111 11111
Q ss_pred CCc-------cceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCc---------------------
Q psy14257 297 STA-------EGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNI--------------------- 348 (841)
Q Consensus 297 ~~p-------~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~--------------------- 348 (841)
... .++++.+.++ .+|.+.... ......+|++++++|...+.+.....
T Consensus 100 ~~~~~~~~~~~~~~~SpDg~--ll~~~~~~~--~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~ 175 (1045)
T 1k32_A 100 GKSTGRRMFTDVAGFDPDGN--LIISTDAMQ--PFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPH 175 (1045)
T ss_dssp EEEETTEECSEEEEECTTCC--EEEEECTTS--SSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTT
T ss_pred CcccccccccccccCCCCCE--EEEEECCcC--CCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccc
Confidence 111 4566666553 333332211 01123468887776655443322110
Q ss_pred ----------------------------CCCceEEEEccCCEEEEEeCC--CCeEEEEEecCCccEEEEeeeeecCCCcc
Q psy14257 349 ----------------------------QWPSSLVIDYNQDILYWCDSH--LNTVESVRVDGSERTVSFNLEVLGSDSRV 398 (841)
Q Consensus 349 ----------------------------~~P~glavD~~~~~lYwaD~~--~~~I~~~~ldG~~~~~~~~~~~~~~~~~~ 398 (841)
.....+++. .++||++... ...|+.++++|...+.+......
T Consensus 176 ~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s--~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~------ 247 (1045)
T 1k32_A 176 WKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV--GHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDY------ 247 (1045)
T ss_dssp STTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEE--TTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSS------
T ss_pred cccccCCCcCCEEEECCCCCeEECcCCCCcccceEEe--CCEEEEEEeccCceEEEEEeCCCCcceEecCCCCc------
Confidence 001111222 2355544332 33566666666555443211100
Q ss_pred ccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCC----------CCCceeEEEc-CCCCeEEEEecCCCC
Q psy14257 399 GIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGD----------MESPRAIALD-PRFGLLFWTDWDSKA 467 (841)
Q Consensus 399 ~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~----------l~~P~giavd-~~~g~Ly~td~~~~~ 467 (841)
...++...+..|.++. .+.|++.++.+.....+.... ...+..++++ |...+|.++. .
T Consensus 248 -----~~~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~----~ 316 (1045)
T 1k32_A 248 -----YPRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS----R 316 (1045)
T ss_dssp -----CEEEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE----T
T ss_pred -----ceeeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE----c
Confidence 0001222234455542 467777777555443222110 1146789999 9877787776 3
Q ss_pred CeEEEecCCCCCcEEEEEecccCCCCC-CceeEEEeccCCEEEEEeCCCCeEE-EEEcCCCeeEEEEcCCCCCCcceEEE
Q psy14257 468 PRIERCSMSGEHRSVIVRVDLLTSRGA-WPNGLTLDYQLTRIYWIDAKSDSIH-TVTYDGKDHHVVLSNHDSLTHPFAIA 545 (841)
Q Consensus 468 ~~I~r~~ldG~~~~~i~~~~~~~~~~~-~P~glalD~~~~~LYw~d~~~~~I~-~~~~dG~~~~~i~~~~~~l~~P~gla 545 (841)
..|+..++++.....+.. .-. .+..+++. .+++|+++.. ...|+ .+++++.....+. .. ...+..++
T Consensus 317 ~~i~~~~~~~~~~~~~~~------~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~~~l~-~~--~~~~~~~~ 385 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPE------PLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKAEKFE-EN--LGNVFAMG 385 (1045)
T ss_dssp TEEEEECTTSSBEEECSC------CSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCEEECC-CC--CCSEEEEE
T ss_pred CEEEEEcCCCCceEEccC------CCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCceEec-CC--ccceeeeE
Confidence 578888887654333211 112 34556666 5667777665 56888 8888887665554 22 23456777
Q ss_pred Ee--cCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 546 LF--ENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 546 ~~--~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
+. +.+|+++. ..+.|+.++..+|+...++
T Consensus 386 ~SpDG~~la~~~-~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 386 VDRNGKFAVVAN-DRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp ECTTSSEEEEEE-TTSEEEEEETTTCCEEEEE
T ss_pred ECCCCCEEEEEC-CCCeEEEEECCCCceEEec
Confidence 73 34566554 3467888887776654443
No 169
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.42 E-value=1.6e-07 Score=87.86 Aligned_cols=76 Identities=25% Similarity=0.596 Sum_probs=63.6
Q ss_pred ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCcccc-cccc---C-CCCCccCceeecCCCC-ceEEeecCCee
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSY-LHPC---E-AWGTCSQDCEPSVSNN-SYKCTCHAGYE 203 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~-~~eC---~-~~~~Cs~~C~~~~~~g-~~~C~C~~G~~ 203 (841)
++|. ..+|.+ .|.++.++|+|.|++||. |+.|++ +++| . ..+.|.+.|.++ .+ +|+|.|++||.
T Consensus 48 d~C~--~~pC~n~g~C~~~~g~y~C~C~~G~~----G~~C~~~~~~c~~c~~~~~~C~~~C~~~--~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 48 DQCA--SSPCQNGGSCKDQLQSYICFCLPAFE----GRNCETHKDDQLICVNENGGCEQYCSDH--TGTKRSCRCHEGYS 119 (142)
T ss_dssp CGGG--GCCCCTTCEEEEETTEEEEECCTTEE----STTSCEEGGGCCSTTTGGGGCSSEEECC--TTSCCEEECCTTEE
T ss_pred CcCc--CCCcCCCCEEeCCCCCEEeeCCCCcc----CCccccCccccccccCCCCCccCEeECC--CCCCEEEECCCCce
Confidence 5676 347865 899999999999999996 778986 5664 2 346788899999 88 99999999999
Q ss_pred ecCCCCceEeCC
Q psy14257 204 LEPDMFTCKSKS 215 (841)
Q Consensus 204 l~~d~~~C~~~~ 215 (841)
+..++++|.++.
T Consensus 120 l~~dG~~C~~~~ 131 (142)
T 2c4f_L 120 LLADGVSCTPTV 131 (142)
T ss_dssp ECTTSSCEEESS
T ss_pred ECCCCCCCCCCC
Confidence 999999999873
No 170
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.42 E-value=1.5e-05 Score=87.72 Aligned_cols=217 Identities=11% Similarity=0.021 Sum_probs=127.7
Q ss_pred CCCEEEEccCCCcccc----cc-------ccCcCCCceEEEEccCCEEEEEeCCC------CeEEEEEecCCccEEEEee
Q psy14257 327 DGGIEKAGMHGENRSP----LV-------TKNIQWPSSLVIDYNQDILYWCDSHL------NTVESVRVDGSERTVSFNL 389 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~----l~-------~~~~~~P~glavD~~~~~lYwaD~~~------~~I~~~~ldG~~~~~~~~~ 389 (841)
+++|+.++.....+++ .+ ..+..+|.++..-+++ ||++.... +.|..++....+.......
T Consensus 105 s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~ 182 (462)
T 2ece_A 105 SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYSFEPLGKWEI 182 (462)
T ss_dssp TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTTCCEEEECCS
T ss_pred CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEcc
Confidence 4577777764332221 11 1144578888888766 88876544 5677766664443322211
Q ss_pred eeecCCCccccCCCCCCcc--ccccceEEEEec------------------CCCcEEEEccCCce-EEEEecC-CCCCce
Q psy14257 390 EVLGSDSRVGIPNCRPEDN--LWIGKNLYWVES------------------NLDQIEVAKLSGQF-RRTLIAG-DMESPR 447 (841)
Q Consensus 390 ~~~~~~~~~~i~~~~~~av--dw~~~~LY~tD~------------------~~~~I~v~~~~G~~-~~~l~~~-~l~~P~ 447 (841)
. ..+..++. ++ ....+.+|.+++ ..++|.+++++... ..++-.. .-..|+
T Consensus 183 ~--~~~~~~~Y------d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~ 254 (462)
T 2ece_A 183 D--RGDQYLAY------DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMAL 254 (462)
T ss_dssp B--CTTCCCCC------CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEE
T ss_pred C--CCCccccc------eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccc
Confidence 1 11111110 11 112356777763 36899999997543 3333221 114688
Q ss_pred eEEE--cCCCCeEEEEec-----CCCCCeEEEecCCCCCcEE--EEEeccc--CCC-----------CCCceeEEEeccC
Q psy14257 448 AIAL--DPRFGLLFWTDW-----DSKAPRIERCSMSGEHRSV--IVRVDLL--TSR-----------GAWPNGLTLDYQL 505 (841)
Q Consensus 448 giav--d~~~g~Ly~td~-----~~~~~~I~r~~ldG~~~~~--i~~~~~~--~~~-----------~~~P~glalD~~~ 505 (841)
.|++ +|...++|++.. . .+.|++...++..... +++.... ... -..|.+|.|.+++
T Consensus 255 ~i~f~~~Pdg~~aYV~~e~~~~~L--ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DG 332 (462)
T 2ece_A 255 ELRPLHDPTKLMGFINMVVSLKDL--SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDD 332 (462)
T ss_dssp EEEECSSTTCCEEEEEEEEETTTC--CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTS
T ss_pred eeEeeECCCCCEEEEEEeeeccCC--CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCC
Confidence 8877 999999999986 5 5788877776522111 1111100 000 2468999999999
Q ss_pred CEEEEEeCCCCeEEEEEcC-CCeeE---EEEcCCC-----------CCCcceEEEEe--cCeEEEEe
Q psy14257 506 TRIYWIDAKSDSIHTVTYD-GKDHH---VVLSNHD-----------SLTHPFAIALF--ENHVYWTD 555 (841)
Q Consensus 506 ~~LYw~d~~~~~I~~~~~d-G~~~~---~i~~~~~-----------~l~~P~gla~~--~~~lY~td 555 (841)
++||+++...+.|..++.+ ....+ .+..++. ....|.++++. +.+||+++
T Consensus 333 rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 333 KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999999999999999985 32222 2222210 01259999984 67999998
No 171
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.39 E-value=0.0081 Score=69.45 Aligned_cols=498 Identities=9% Similarity=-0.056 Sum_probs=233.5
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCccc-ceEEEEeCCCCC-ccceEEee--ecCceeEEEeeecCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLS-NIDVVVQTGLST-AEGLAVDW--IGKNLYMFWAFWSLSPSNS 325 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~-~~~~~~~~~l~~-p~giavD~--~~~~~y~~~td~~~~~~~~ 325 (841)
.+.+++|...... |.... .+.|...++..+.-. .....+...-.. ...+++.+ .++ +++-. .
T Consensus 20 ~v~~~~~spdg~~--l~~~~--~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~--~l~s~--------~ 85 (615)
T 1pgu_A 20 FTTHLSYDPTTNA--IAYPC--GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQ--YLCSG--------D 85 (615)
T ss_dssp CCCCCEEETTTTE--EEEEE--TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCC--EEEEE--------E
T ss_pred ceeEEEECCCCCE--EEEec--CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCC--EEEEe--------c
Confidence 3556777665433 55544 567777777654100 112223322334 56677776 442 22211 2
Q ss_pred CCCCEEEEccC-CC-------ccccccccCcCCCceEEEEccCCEEEEEeCCC---CeEEEEEecCCccEEEEeeeeecC
Q psy14257 326 SDGGIEKAGMH-GE-------NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL---NTVESVRVDGSERTVSFNLEVLGS 394 (841)
Q Consensus 326 ~~~~I~~~~~d-G~-------~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~---~~I~~~~ldG~~~~~~~~~~~~~~ 394 (841)
.++.|..+++. |. .........-.....+++.++++.|+.+.... +.|+..+ .+.....+. ..
T Consensus 86 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~-----~~ 159 (615)
T 1pgu_A 86 ESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVS-----GH 159 (615)
T ss_dssp TTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TCCEEEECC-----SC
T ss_pred CCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CCCcceeee-----cC
Confidence 35677777774 31 11111222344567899999888888877543 3454444 222111110 00
Q ss_pred CCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCC---CceeEEEcCC-CCeEEEEecCCCCCeE
Q psy14257 395 DSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDME---SPRAIALDPR-FGLLFWTDWDSKAPRI 470 (841)
Q Consensus 395 ~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~---~P~giavd~~-~g~Ly~td~~~~~~~I 470 (841)
...+ ..+++...+..++++-...+.|.+.++........+..... ....++++|. ..+|+.... .+.|
T Consensus 160 ~~~v-----~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i 231 (615)
T 1pgu_A 160 SQRI-----NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS---DRKI 231 (615)
T ss_dssp SSCE-----EEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET---TCCE
T ss_pred CccE-----EEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC---CCeE
Confidence 0000 00011112233666666778899988876544433433334 5789999998 555655543 4677
Q ss_pred EEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee-EEEEcCCCCC-CcceEEEEec
Q psy14257 471 ERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH-HVVLSNHDSL-THPFAIALFE 548 (841)
Q Consensus 471 ~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~-~~i~~~~~~l-~~P~gla~~~ 548 (841)
...++........+.. .....-.....+++. .+..|+ +-...+.|...++..... ..+....... .....+....
T Consensus 232 ~vwd~~~~~~~~~~~~-~~~~~~~~v~~~~~~-~~~~l~-~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (615)
T 1pgu_A 232 SCFDGKSGEFLKYIED-DQEPVQGGIFALSWL-DSQKFA-TVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATG 308 (615)
T ss_dssp EEEETTTCCEEEECCB-TTBCCCSCEEEEEES-SSSEEE-EEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEE
T ss_pred EEEECCCCCEeEEecc-cccccCCceEEEEEc-CCCEEE-EEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCC
Confidence 7777653332222100 000122345678887 445555 444567899999875433 3333221111 2234555534
Q ss_pred CeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCccc-----------CC-C--CCCCCCCccccccCCCCce
Q psy14257 549 NHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKK-----------SP-C--EMNNGNCSHLCLIGMNGTY 614 (841)
Q Consensus 549 ~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~-----------n~-C--~~~ng~Cs~lC~~~~~~~~ 614 (841)
+...++-...+.|...+..+++....+.........+.. |... +. + ....+.-..+.+ .+....
T Consensus 309 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~~l 386 (615)
T 1pgu_A 309 NGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQEY 386 (615)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTTCC
T ss_pred CCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCcEE
Confidence 444444445667776665544433333211111111101 1100 00 0 000000011111 000000
Q ss_pred eeeCCCCceeecCCC--------cc--cccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEE
Q psy14257 615 KCQCPHVMKLMSDNK--------TC--QVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIY 684 (841)
Q Consensus 615 ~C~Cp~g~~l~~d~~--------tC--~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iy 684 (841)
.....++....-+-. .+ ..+...+++.+..+.+....+.... .+..+ .....+.+++|. .+.|+
T Consensus 387 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~--~~~l~ 460 (615)
T 1pgu_A 387 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGD--IIKSV--RLNSPGSAVSLS--QNYVA 460 (615)
T ss_dssp EEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCC--EEEEE--ECSSCEEEEEEC--SSEEE
T ss_pred EEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCc--eeeec--ccCCCceEEEEc--CCEEE
Confidence 011111111000000 00 0011223333344455555442221 11111 122456777777 56666
Q ss_pred EEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEE-EEeeCCCCCcceeEEeecCCcEEEEecCCCCCe
Q psy14257 685 WTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQ-LVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSK 763 (841)
Q Consensus 685 w~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~ 763 (841)
......+.|+..++.+.. .. ..+......+..|++.+.++.|.... ..+.
T Consensus 461 ~~~~~d~~i~~~~~~~~~--------------------------~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~dg~ 511 (615)
T 1pgu_A 461 VGLEEGNTIQVFKLSDLE--------------------------VSFDLKTPLRAKPSYISISPSETYIAAGD---VMGK 511 (615)
T ss_dssp EEETTTSCEEEEETTEEE--------------------------EEEECSSCCSSCEEEEEECTTSSEEEEEE---TTSC
T ss_pred EeecCCCeEEEEECCCcc--------------------------ccccccCCccCceEEEEECCCCCEEEEcC---CCCe
Confidence 555326778887776543 11 12223456788899988887777663 4688
Q ss_pred EEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeC----------CCCeEEEEecCCCcceEEEEecCCC
Q psy14257 764 IVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWP----------VKGKMFWSNVTKQVVTIEMAFMDGT 823 (841)
Q Consensus 764 I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~----------~~g~lyw~d~~~~~~~I~~~~~dG~ 823 (841)
|.+.++........+.+. ......+|++.| ...+|.-..... +|...+++..
T Consensus 512 i~iw~~~~~~~~~~~~~~-----h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~ 573 (615)
T 1pgu_A 512 ILLYDLQSREVKTSRWAF-----RTSKINAISWKPAEKGANEEEIEEDLVATGSLDT---NIFIYSVKRP 573 (615)
T ss_dssp EEEEETTTTEEEECCSCC-----CSSCEEEEEECCCC------CCSCCEEEEEETTS---CEEEEESSCT
T ss_pred EEEeeCCCCcceeEeecC-----CCCceeEEEEcCccccccccccCCCEEEEEcCCC---cEEEEECCCC
Confidence 999999654332222210 046789999999 555555544332 4666666554
No 172
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.38 E-value=1.8e-07 Score=87.83 Aligned_cols=70 Identities=21% Similarity=0.486 Sum_probs=61.8
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc---ccccccCCCCCCCc-ccCCCCcEEecCCCceecCCCCccccccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC---DEKQCLRSDCHHDC-YNTPEGFMCVCPRDMYLQPDLITCSYLHP 174 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C---~eC~~~~~~C~~~C-~~~~g~~~C~C~~Gy~l~~d~~~C~~~~e 174 (841)
+|.++ +.|++. ++.| .|+.||.+..| ++|...++.|.+.| .++.++|+|.|++||.+.++++.|.++++
T Consensus 55 pC~n~-g~C~~~~~~y~C----~C~~G~~G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~~ 129 (146)
T 1x7a_L 55 PCLNG-GLCKDDINSYEC----WCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAVP 129 (146)
T ss_dssp SSCTT-CEEEECSSCEEE----ECCSSEESTTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEECSS
T ss_pred CCCCC-CEeECCCCCEEE----ecCCCCcCCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCCCC
Confidence 57776 889876 7889 99999988889 78987677899999 99999999999999999999999998876
Q ss_pred c
Q psy14257 175 C 175 (841)
Q Consensus 175 C 175 (841)
+
T Consensus 130 ~ 130 (146)
T 1x7a_L 130 F 130 (146)
T ss_dssp S
T ss_pred C
Confidence 5
No 173
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.37 E-value=2.2e-07 Score=83.35 Aligned_cols=69 Identities=26% Similarity=0.504 Sum_probs=57.6
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc------ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC------DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYL 172 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C------~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~ 172 (841)
.|.++ +.|++. +|.| .|+.||.+..| ++|...++.|++.|.++.++|+|.|++||.+..+++.|++.
T Consensus 21 ~C~~~-g~C~~~~~~y~C----~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 21 LCCGH-GTCIDGIGSFSC----DCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp TTTTS-EEECCCSSCCCE----EECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred cCCCc-CCCCCCCCCcEe----eCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 35555 778765 7889 89999987778 26876677899999999999999999999999999999876
Q ss_pred cc
Q psy14257 173 HP 174 (841)
Q Consensus 173 ~e 174 (841)
.+
T Consensus 96 ~~ 97 (114)
T 1aut_L 96 VK 97 (114)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 174
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.37 E-value=1.2e-07 Score=93.43 Aligned_cols=102 Identities=25% Similarity=0.593 Sum_probs=78.3
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCc---cc---cccccc--CCCCCC--CcccCC-----CCcEEecCCCceec
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEM---FC---DEKQCL--RSDCHH--DCYNTP-----EGFMCVCPRDMYLQ 163 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~---~C---~eC~~~--~~~C~~--~C~~~~-----g~~~C~C~~Gy~l~ 163 (841)
+|.+ +.|++. ++.| .|.+||... .| ++|... ..+|.+ .|.++. ++|+|.|++||.+.
T Consensus 12 pC~n--g~C~~~~g~~~C----~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~ 85 (186)
T 1z1y_A 12 ICXN--GQLVQMSNHFXC----MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLX 85 (186)
T ss_dssp CCBT--EEEEECSSCEEE----EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEE
T ss_pred CCCC--CEeECCCCCeEe----ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccC
Confidence 6776 788875 7889 899999543 68 788743 457864 899999 89999999999864
Q ss_pred CCCCccccccccCCCCCcc--Ccee----ecCCCCceEEeecCCeeecC-CCCceEeC
Q psy14257 164 PDLITCSYLHPCEAWGTCS--QDCE----PSVSNNSYKCTCHAGYELEP-DMFTCKSK 214 (841)
Q Consensus 164 ~d~~~C~~~~eC~~~~~Cs--~~C~----~~~~~g~~~C~C~~G~~l~~-d~~~C~~~ 214 (841)
. ..|. +++|.. .+|. ..|. ++ .++|+|.|++||.+.. ++..|.++
T Consensus 86 ~--~~C~-~d~C~~-~~C~~~g~C~~~~~~~--~g~~~C~C~~Gy~g~~~~~~~C~~~ 137 (186)
T 1z1y_A 86 E--DTCV-LDVCQY-XNCGESGECIVEYLSE--IQSAGCSCAIGXVPNPEDEXXCTXT 137 (186)
T ss_dssp T--TEEE-EGGGTT-CCCCTTEEEEEEEETT--EEEEEEEECTEEEEETTTTTEEEEE
T ss_pred C--CCCC-CCcCcC-CCCCCCCEEeeCCcCC--CCCceEECCCCCcccCCCCCcceEc
Confidence 3 3676 788853 3464 3565 77 8899999999999865 67888765
No 175
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.35 E-value=6.5e-05 Score=81.36 Aligned_cols=220 Identities=10% Similarity=0.054 Sum_probs=140.0
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCC---C---CCCCCEEEEccCCC---ccccccc-c----CcCCCceEEEE-cc
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPS---N---SSDGGIEKAGMHGE---NRSPLVT-K----NIQWPSSLVID-YN 359 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~---~---~~~~~I~~~~~dG~---~~~~l~~-~----~~~~P~glavD-~~ 359 (841)
++.++.++.+|.. ++|+|.++-.-+... . ...++|..+++... ..+.+.. . .-..-+.|+|| ..
T Consensus 85 ~lvsV~~v~iD~~-~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~ 163 (381)
T 3q6k_A 85 ELTSIYQPVIDDC-RRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVAN 163 (381)
T ss_dssp SSSCEEEEEECTT-CEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESC
T ss_pred ceEEeeEEEEcCC-CcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEeccc
Confidence 5778888999964 456665443212111 1 33568888887654 3333221 1 12335678898 32
Q ss_pred ------CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCc
Q psy14257 360 ------QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQ 433 (841)
Q Consensus 360 ------~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~ 433 (841)
++.+|++|.....|.++++.......+.... +.. | .-..+..+|.
T Consensus 164 ~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~~p------------------------d----~~~~~~i~G~ 214 (381)
T 3q6k_A 164 PKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-FKA------------------------E----RPTKFDYGGK 214 (381)
T ss_dssp TTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-GSC------------------------C----SCEEEEETTE
T ss_pred CCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-Ccc------------------------c----cCcceEECCE
Confidence 6788999988888888888644333332110 000 0 0011223343
Q ss_pred eEEEEecCCCCCceeEEEcCC----CCeEEEEecCCCCCeEEEecC----CCC---CcEEEEEecccCCC-CCCceeEEE
Q psy14257 434 FRRTLIAGDMESPRAIALDPR----FGLLFWTDWDSKAPRIERCSM----SGE---HRSVIVRVDLLTSR-GAWPNGLTL 501 (841)
Q Consensus 434 ~~~~l~~~~l~~P~giavd~~----~g~Ly~td~~~~~~~I~r~~l----dG~---~~~~i~~~~~~~~~-~~~P~glal 501 (841)
... . .....|||++|. .+.|||.--. ..+++++.. +.+ ..+.+.. .. .....++++
T Consensus 215 ~~~--~---~~Gi~gIaLsp~~~~~~~~LYf~pls--s~~ly~V~T~~L~~~~~~~~v~~~G~-----kg~~s~~~~~~~ 282 (381)
T 3q6k_A 215 EYE--F---KAGIFGITLGDRDSEGNRPAYYLAGS--AIKVYSVNTKELKQKGGKLNPELLGN-----RGKYNDAIALAY 282 (381)
T ss_dssp EEE--E---CCCEEEEEECCCCTTSCCEEEEEESS--CSEEEEEEHHHHSSTTCCCCCEEEEE-----CCTTCCEEEEEE
T ss_pred EeE--e---ccCceEEEecCCcCCCCeEEEEEECC--CCcEEEEEHHHhhCcchhhceEEeee-----cCCCCCcceEEE
Confidence 221 1 135679999998 7899999976 678998873 222 2333333 22 234457889
Q ss_pred eccCCEEEEEeCCCCeEEEEEcCC-----CeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCC
Q psy14257 502 DYQLTRIYWIDAKSDSIHTVTYDG-----KDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWR 557 (841)
Q Consensus 502 D~~~~~LYw~d~~~~~I~~~~~dG-----~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~ 557 (841)
|..++.||+++...+.|.+.+.++ .+..++++.. .+..|.+|++. +++||++..+
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECS
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECC-CccccCeEEECCCCeEEEEECc
Confidence 867899999999999999999998 4667788776 78999999994 7899998754
No 176
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.34 E-value=4e-08 Score=81.02 Aligned_cols=52 Identities=29% Similarity=0.511 Sum_probs=42.7
Q ss_pred eeccCccCcCCcCCCCCCCCCCC-CCCC-CCCCCCCCcccCCC-CeEecCCCCCC
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELA-EHCQ-DRKCDESHFTCNET-LRCIPLAWACD 53 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~-~~C~-~~~C~~~~~~C~~~-~~Ci~~~~~Cd 53 (841)
+|||..|+|||..||.|||||.. ..|. ..+|.+.+|+|.+. +.||+....+.
T Consensus 21 ~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~gL 75 (80)
T 2kny_A 21 VCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRKL 75 (80)
T ss_dssp CEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTTT
T ss_pred eEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHHH
Confidence 69999999999999999999983 2576 47899999999732 68998766543
No 177
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.34 E-value=4.3e-07 Score=85.18 Aligned_cols=90 Identities=28% Similarity=0.746 Sum_probs=69.9
Q ss_pred ccCCCCCeEecC----CCCCCCCCCCCCCCCCccc----------------ccccccCCCCCC--Ccc-------cCCCC
Q psy14257 101 DCQDVLRTCIPK----ALVCDGEPACFNGEDEMFC----------------DEKQCLRSDCHH--DCY-------NTPEG 151 (841)
Q Consensus 101 ~C~~~~~~Ci~~----~~~Cdg~~~C~~g~de~~C----------------~eC~~~~~~C~~--~C~-------~~~g~ 151 (841)
+|.++ +.|++. ++.| .|+.||.+..| ++|. ..+|.+ .|. ++.++
T Consensus 7 pC~~~-g~C~~~~~~g~~~C----~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~--~~~C~~~g~C~~~~~~~~~~~~~ 79 (143)
T 4d90_A 7 PCENG-GICLPGLADGSFSC----ECPDGFTDPNCSSVVEVASDEEEPTSAGPCT--PNPCHNGGTCEISEAYRGDTFIG 79 (143)
T ss_dssp CCGGG-CEEEC-----CCEE----ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTS--SCCCCTTCEEEECCCEETTEECC
T ss_pred cCCCC-CEeeCCCCCCCEEe----ECCCCCCCCCCccCccccccccccccCCcCC--CCCCCCCCEecCCCccccCCCCC
Confidence 47776 888874 5789 89999977666 1233 335643 787 77889
Q ss_pred cEEecCCCceecCCCCccc-cccccCCCCCcc--CceeecCCCCceEEeecCCeee
Q psy14257 152 FMCVCPRDMYLQPDLITCS-YLHPCEAWGTCS--QDCEPSVSNNSYKCTCHAGYEL 204 (841)
Q Consensus 152 ~~C~C~~Gy~l~~d~~~C~-~~~eC~~~~~Cs--~~C~~~~~~g~~~C~C~~G~~l 204 (841)
|.|.|++||. +..|+ ++++|. ..+|. ..|.++ .++|+|.|++||..
T Consensus 80 ~~C~C~~G~~----G~~C~~~i~~C~-~~~C~~~~~C~~~--~g~~~C~C~~G~~G 128 (143)
T 4d90_A 80 YVCKCPRGFN----GIHCQHNINECE-VEPCKNGGICTDL--VANYSCECPGEFMG 128 (143)
T ss_dssp EEEECCTTEE----STTSCEECCTTT-TCCSCTTCEEEEE--TTEEEEECCTTCBS
T ss_pred eEeECcCCCc----CCCcccCCCcCC-CCCCCCCCEeECC--CCCeEeECCCCCcc
Confidence 9999999995 78897 999995 44674 489999 99999999999974
No 178
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.33 E-value=5.3e-07 Score=96.77 Aligned_cols=70 Identities=29% Similarity=0.724 Sum_probs=62.2
Q ss_pred CCCC--CcccCCCCcEEecCCCceecCCCCccc-cccccCC--CCCccCceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 140 DCHH--DCYNTPEGFMCVCPRDMYLQPDLITCS-YLHPCEA--WGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 140 ~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~-~~~eC~~--~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
+|.+ .|.++.++|.|.|++||. ++.|+ +++||.. ..+|.+.|.++ .++|+|.|++||.+..+++.|.+.
T Consensus 12 pC~~~g~C~~~~~~~~C~C~~g~~----g~~C~~~~~eC~~~~~~~C~~~C~~~--~g~~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 12 PCLHNGSCQDSIWGYTCTCSPGYE----GSNCELAKNECHPERTDGCQHFCLPG--QESYTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp CCTTTCCCCCCSSSCCCCCSSSCC----SSSSCCCSSSCCTTCTTSCSSEEECC--SSSCEEECCTTEECCTTSSCCEEC
T ss_pred CCCCCCEeECCCCCeEEECCCCCc----CCccccCcccCCCCCCCCCcCccccC--CCeeEEeccccccccccccccccc
Confidence 5653 799999999999999996 77998 9999974 37899999999 999999999999999899999987
Q ss_pred C
Q psy14257 215 S 215 (841)
Q Consensus 215 ~ 215 (841)
+
T Consensus 86 ~ 86 (317)
T 3h5c_B 86 D 86 (317)
T ss_dssp S
T ss_pred c
Confidence 3
No 179
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.32 E-value=0.00054 Score=74.61 Aligned_cols=299 Identities=7% Similarity=0.011 Sum_probs=153.7
Q ss_pred EEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee
Q psy14257 449 IALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH 528 (841)
Q Consensus 449 iavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~ 528 (841)
.++.|+..+|+++.......+|+..++++...+.+.. .......++++.+++++|+++.. ...|+..++++...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-----~~~~~~~~~~~spdg~~l~~~~~-~~~l~~~d~~~g~~ 114 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-----GRGDNTFGGFLSPDDDALFYVKD-GRNLMRVDLATLEE 114 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCC-----SSCBCSSSCEECTTSSEEEEEET-TTEEEEEETTTCCE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeee-----CCCCCccceEEcCCCCEEEEEeC-CCeEEEEECCCCcc
Confidence 5788888777777653235579999998776555543 11112235788988899999885 36899999998776
Q ss_pred EEEEcCCCCCCcceEEEE-ecCeEEEE----------------------eCCCCeEEEEeccCCcceEEEecccCCCcee
Q psy14257 529 HVVLSNHDSLTHPFAIAL-FENHVYWT----------------------DWRTNSVIRANKWNGSDVTLIQRTLTQPFIY 585 (841)
Q Consensus 529 ~~i~~~~~~l~~P~gla~-~~~~lY~t----------------------d~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~ 585 (841)
+.+..............+ .++.++.. ......|+.++..+|+...+.... ..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~-~~---- 189 (388)
T 3pe7_A 115 NVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQEN-QW---- 189 (388)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEES-SC----
T ss_pred eeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCC-cc----
Confidence 666543321110011111 12322221 011234555554444322221100 00
Q ss_pred ccCCcccCCCCCCCCCCccccccCCCCceeeeCC-CCceeecCCCcccccCceeEEeec-------CCeEEEEecCCCCc
Q psy14257 586 VNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCP-HVMKLMSDNKTCQVADSQFIIFSR-------PREIRGVDLEHPYY 657 (841)
Q Consensus 586 h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp-~g~~l~~d~~tC~~~~~~~l~~~~-------~~~i~~~~l~~~~~ 657 (841)
-. .....| +| ..|+++. ...|+.++++....
T Consensus 190 ----------------~~----------~~~~sp~dg---------------~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 190 ----------------LG----------HPIYRPYDD---------------STVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp ----------------EE----------EEEEETTEE---------------EEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred ----------------cc----------ccEECCCCC---------------CEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 00 001111 11 1222221 22566666554322
Q ss_pred cccceeecCCCCCceEEEEecCCCEEEEEECC-CC---eEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEe
Q psy14257 658 HTIPTISIPQVFSPNNLNFDAANKKIYWTDQE-YN---EVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVV 733 (841)
Q Consensus 658 ~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~-~~---~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 733 (841)
..+. .......+..++|.|..+.|+++... .. .|+++++.+...+.+... .+ ...
T Consensus 229 ~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~---------------~~--~~~-- 287 (388)
T 3pe7_A 229 RKVK--THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSM---------------PA--CSH-- 287 (388)
T ss_dssp EESC--CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEE---------------CC--EEE--
T ss_pred EEee--eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcC---------------CC--cee--
Confidence 2111 01000124567899999988665432 22 399998887652221100 00 000
Q ss_pred eCCCCCcceeEEeecCCcEEEEecC------CCCCeEEEEecCCcceEEEEcCCCC-C---CCcCCCceEEEEeCCCCeE
Q psy14257 734 DAGISHPSGLAIDWIAQNMFIAVSS------PTQSKIVVCNLEGEYQTTILSNESN-D---TSTLSKISSIAVWPVKGKM 803 (841)
Q Consensus 734 ~~~~~~p~glAvD~~~~~LYw~~~~------~~~~~I~v~~l~g~~~~~~~~~~~~-~---~~~l~~p~~iavd~~~g~l 803 (841)
....+.++++.+.++.|+++..+ .....|.++++++...+.+...... . .........++..|...+|
T Consensus 288 --~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l 365 (388)
T 3pe7_A 288 --LMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQI 365 (388)
T ss_dssp --EEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEE
T ss_pred --eeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEE
Confidence 01236677888889999986322 3567899999998766556543100 0 0000145677899988889
Q ss_pred EEEecCCCcceEEEEecCC
Q psy14257 804 FWSNVTKQVVTIEMAFMDG 822 (841)
Q Consensus 804 yw~d~~~~~~~I~~~~~dG 822 (841)
+++......+.|.+++++.
T Consensus 366 ~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 366 LFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp EEEECTTSSCEEEEEECCG
T ss_pred EEEecCCCceeEEEEECCh
Confidence 9887644346788887754
No 180
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.29 E-value=2.1e-07 Score=78.88 Aligned_cols=65 Identities=29% Similarity=0.595 Sum_probs=52.6
Q ss_pred cccCCCCCeEecC--CCCCCCCCCCCCCCC-----Cccc---ccccccCCCCC-CCcccCCCCcEEecCCCceecCCCCc
Q psy14257 100 FDCQDVLRTCIPK--ALVCDGEPACFNGED-----EMFC---DEKQCLRSDCH-HDCYNTPEGFMCVCPRDMYLQPDLIT 168 (841)
Q Consensus 100 ~~C~~~~~~Ci~~--~~~Cdg~~~C~~g~d-----e~~C---~eC~~~~~~C~-~~C~~~~g~~~C~C~~Gy~l~~d~~~ 168 (841)
..|.+ +.|++. +|.| .|+.||. +..| +||...+..|. +.|.|++++|+|.|++||.+.+++++
T Consensus 11 ~~C~~--g~C~n~~g~y~C----~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~ 84 (86)
T 1lmj_A 11 DLCGR--GQCVNTPGDFEC----KCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISA 84 (86)
T ss_dssp STTTT--SCEEEETTEEEE----CCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCC
T ss_pred CCCCC--CEEECCCCCEEe----eCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCc
Confidence 34654 577765 7889 8999985 5568 78987666786 58999999999999999999888887
Q ss_pred cc
Q psy14257 169 CS 170 (841)
Q Consensus 169 C~ 170 (841)
|.
T Consensus 85 Ci 86 (86)
T 1lmj_A 85 CI 86 (86)
T ss_dssp CC
T ss_pred cC
Confidence 73
No 181
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.27 E-value=0.0012 Score=78.93 Aligned_cols=159 Identities=8% Similarity=-0.019 Sum_probs=97.8
Q ss_pred cCCCceEEEEccCCEEEEEeCCCC-----eEEEEEecCCccEEEEeeeeecCCC-cccc--------------CCCCCCc
Q psy14257 348 IQWPSSLVIDYNQDILYWCDSHLN-----TVESVRVDGSERTVSFNLEVLGSDS-RVGI--------------PNCRPED 407 (841)
Q Consensus 348 ~~~P~glavD~~~~~lYwaD~~~~-----~I~~~~ldG~~~~~~~~~~~~~~~~-~~~i--------------~~~~~~a 407 (841)
...+..+++.+++++|+++....+ .|+..++++...+.+........+. .+.. ..-...+
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 345788999999999999987444 8999999887766655432111000 0000 0001123
Q ss_pred cccccceEEEEecCCCcEEEEccCCc---eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEE
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSGQ---FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIV 484 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G~---~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~ 484 (841)
+...++.|+++.. +.|.+.++++. ..+.+.. .-..+..++++|++.+|+++. ...|+..++++.....+.
T Consensus 116 ~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~----~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIR----GRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp ECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEE----TTEEEEEETTTTEEEECC
T ss_pred ECCCCCEEEEEeC--CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEe----CCcEEEEecCCCCEEEec
Confidence 4445567777765 78999999876 4443332 235678999999988888876 347999998875444332
Q ss_pred EecccC-----------CCCCCceeEEEeccCCEEEEEeC
Q psy14257 485 RVDLLT-----------SRGAWPNGLTLDYQLTRIYWIDA 513 (841)
Q Consensus 485 ~~~~~~-----------~~~~~P~glalD~~~~~LYw~d~ 513 (841)
...... ..+..+.++++.+++++|+++..
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 210000 00112577899988888888743
No 182
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.26 E-value=0.026 Score=71.63 Aligned_cols=148 Identities=10% Similarity=-0.014 Sum_probs=79.7
Q ss_pred CCeEEecc-CccccccccccccEEEEecc-ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCC
Q psy14257 220 SPFVIFSN-RHELRGVDLRTFNVIALISS-LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLS 297 (841)
Q Consensus 220 ~p~ll~s~-~~~I~~~~~~~~~~~~l~~~-~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~ 297 (841)
..+++... ...|+..++........+.+ ...+.++.|.... . +..+-..++.|...++..+. ....+...-.
T Consensus 627 ~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~-~--~l~s~~~d~~v~vwd~~~~~---~~~~~~~~~~ 700 (1249)
T 3sfz_A 627 GQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDD-S--YIATCSADKKVKIWDSATGK---LVHTYDEHSE 700 (1249)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS-S--EEEEEETTSEEEEEETTTCC---EEEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCC-C--EEEEEeCCCeEEEEECCCCc---eEEEEcCCCC
Confidence 34444333 34455555555433322332 3456788887753 3 44454567888888876653 2222333333
Q ss_pred CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEE
Q psy14257 298 TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 377 (841)
Q Consensus 298 ~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ 377 (841)
....+++.+.++..+++.. ..++.|..+++............-.....+++.+.++.|+.+ ...+.|...+
T Consensus 701 ~v~~~~~~~~~~~~~l~sg--------~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~-s~dg~v~vwd 771 (1249)
T 3sfz_A 701 QVNCCHFTNKSNHLLLATG--------SNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASC-SADGTLRLWD 771 (1249)
T ss_dssp CEEEEEECSSSSCCEEEEE--------ETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEE-ESSSEEEEEE
T ss_pred cEEEEEEecCCCceEEEEE--------eCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEE-ECCCeEEEEe
Confidence 4455666554333344322 235678888876544333333344556778888876655544 4556777777
Q ss_pred ecCCc
Q psy14257 378 VDGSE 382 (841)
Q Consensus 378 ldG~~ 382 (841)
+....
T Consensus 772 ~~~~~ 776 (1249)
T 3sfz_A 772 VRSAN 776 (1249)
T ss_dssp GGGTE
T ss_pred CCCCc
Confidence 75443
No 183
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.25 E-value=2.2e-05 Score=89.32 Aligned_cols=199 Identities=13% Similarity=0.091 Sum_probs=128.4
Q ss_pred cCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcc-c-cccceEEEEe-----------------
Q psy14257 359 NQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN-L-WIGKNLYWVE----------------- 419 (841)
Q Consensus 359 ~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~av-d-w~~~~LY~tD----------------- 419 (841)
++++||+.|..+++|.+++++......++.+.....+ .|+ ++ . ..++.||.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~p--hg~------~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGI--HGL------RPQKWPRSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSE--EEE------EECCSSBCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCC--cce------eeeecCCCcEEEEecccccccCCCCccccccc
Confidence 7899999999999999999998766554433211111 111 11 1 2347787773
Q ss_pred cCCCcEEEEccCCceEE-EEecCCCCCceeEEEcCCCCeEEEEecCCCC------------CeEEEecC--------CCC
Q psy14257 420 SNLDQIEVAKLSGQFRR-TLIAGDMESPRAIALDPRFGLLFWTDWDSKA------------PRIERCSM--------SGE 478 (841)
Q Consensus 420 ~~~~~I~v~~~~G~~~~-~l~~~~l~~P~giavd~~~g~Ly~td~~~~~------------~~I~r~~l--------dG~ 478 (841)
...+.+.+++.+..... .+...+ +|.+++++|.++++|+|...++. ..|...+. +|.
T Consensus 172 ~~~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk 249 (595)
T 1fwx_A 172 NYVNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD 249 (595)
T ss_dssp GEEEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC
T ss_pred ccCceEEEEECCCCeEEEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCC
Confidence 44557888888764333 333233 79999999999999999976322 11222221 221
Q ss_pred C----cEEEEEeccc-C-------CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe---------e-EEEEcCCC
Q psy14257 479 H----RSVIVRVDLL-T-------SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD---------H-HVVLSNHD 536 (841)
Q Consensus 479 ~----~~~i~~~~~~-~-------~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~---------~-~~i~~~~~ 536 (841)
. ...+++.... . ..-..|.|+.+.++++++|+++...+.|..++++... . .++.. ..
T Consensus 250 ~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~-v~ 328 (595)
T 1fwx_A 250 YQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-PE 328 (595)
T ss_dssp SEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC-CB
T ss_pred eeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE-cC
Confidence 1 1112221100 0 0124799999999999999999999999999998431 0 12222 12
Q ss_pred CCCcceEEEEe-cCeEEEEeCCCCeEEEEeccC
Q psy14257 537 SLTHPFAIALF-ENHVYWTDWRTNSVIRANKWN 568 (841)
Q Consensus 537 ~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~ 568 (841)
.-..|.++++. +|++|.+.+-.+.|.+++..+
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 23579999995 479999999999999888544
No 184
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.23 E-value=0.00059 Score=75.77 Aligned_cols=245 Identities=9% Similarity=0.083 Sum_probs=146.3
Q ss_pred CcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEe
Q psy14257 423 DQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLD 502 (841)
Q Consensus 423 ~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD 502 (841)
+.|.+.+++|...+.+... -.....+++.|...+|+++........|+..++++.....+.. .-.....+++.
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~------~~~~~~~~~~s 231 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS------FPRHNGAPAFS 231 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC------CSSCEEEEEEC
T ss_pred ceEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec------CCCcccCEEEc
Confidence 6899999998776666542 3567899999998888888765334689999998665554432 22356789999
Q ss_pred ccCCEEEEEeCC--CCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceEEEecc
Q psy14257 503 YQLTRIYWIDAK--SDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVTLIQRT 578 (841)
Q Consensus 503 ~~~~~LYw~d~~--~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~ 578 (841)
+++.+|+++-.. ...|+.+++.+.....+.... .....+++. +.+|+++....+.
T Consensus 232 pdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~---~~~~~~~~spdg~~l~~~s~~~g~------------------ 290 (415)
T 2hqs_A 232 PDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR---SNNTEPTWFPDSQNLAFTSDQAGR------------------ 290 (415)
T ss_dssp TTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCS---SCEEEEEECTTSSEEEEEECTTSS------------------
T ss_pred CCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCC---CcccceEECCCCCEEEEEECCCCC------------------
Confidence 888888877543 346888888765544332211 112233331 1223333211110
Q ss_pred cCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCcc
Q psy14257 579 LTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYH 658 (841)
Q Consensus 579 ~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~ 658 (841)
..|+.++++.....
T Consensus 291 ------------------------------------------------------------------~~i~~~d~~~~~~~ 304 (415)
T 2hqs_A 291 ------------------------------------------------------------------PQVYKVNINGGAPQ 304 (415)
T ss_dssp ------------------------------------------------------------------CEEEEEETTSSCCE
T ss_pred ------------------------------------------------------------------cEEEEEECCCCCEE
Confidence 01222222211100
Q ss_pred ccceeecCCCCCceEEEEecCCCEEEEEECC--CCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCC
Q psy14257 659 TIPTISIPQVFSPNNLNFDAANKKIYWTDQE--YNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAG 736 (841)
Q Consensus 659 ~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 736 (841)
.+.. ....+..++|.|..+.|+++... ...|+.+++.+.. ... +...
T Consensus 305 ---~l~~-~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~--------------------------~~~-l~~~ 353 (415)
T 2hqs_A 305 ---RITW-EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG--------------------------VQV-LSST 353 (415)
T ss_dssp ---ECCC-SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC--------------------------EEE-CCCS
T ss_pred ---EEec-CCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC--------------------------EEE-ecCC
Confidence 0000 01223456777777777777643 3477777777654 222 2222
Q ss_pred CCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCC
Q psy14257 737 ISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVK 800 (841)
Q Consensus 737 ~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~ 800 (841)
..+..+++.+.++.|+++..+....+|.+++++|...+.+... -...+.++..|+.
T Consensus 354 -~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~-------~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 354 -FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPAT-------DGQVKFPAWSPYL 409 (415)
T ss_dssp -SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCS-------SSEEEEEEECCCC
T ss_pred -CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCC-------CCCCcCCcccccc
Confidence 2678899999999898885443344899999998877666543 3567788888764
No 185
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.22 E-value=6.9e-07 Score=75.79 Aligned_cols=61 Identities=28% Similarity=0.660 Sum_probs=50.5
Q ss_pred CeEecC--CCCCCCCCCCCCCCC----Cccc---ccccccCCCCCCCcccCCCCcEEec--CCCceecCCCCcccccc
Q psy14257 107 RTCIPK--ALVCDGEPACFNGED----EMFC---DEKQCLRSDCHHDCYNTPEGFMCVC--PRDMYLQPDLITCSYLH 173 (841)
Q Consensus 107 ~~Ci~~--~~~Cdg~~~C~~g~d----e~~C---~eC~~~~~~C~~~C~~~~g~~~C~C--~~Gy~l~~d~~~C~~~~ 173 (841)
+.|++. +|.| .|+.||. +..| +||. ..+|.+.|.|++++|+|.| ..||.+..+++.|++++
T Consensus 16 ~~C~n~~g~y~C----~C~~G~~~~~~g~~C~dideC~--~~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C~di~ 87 (87)
T 1z6c_A 16 AVCKNIPGDFEC----ECPEGYRYNLKSKSCEDIDECS--ENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSCEVVS 87 (87)
T ss_dssp SSCCCBTTBCCC----SSSTTCEEETTTTEEECCCHHH--HSCCSSEECCCSSSCCEECCSSSCCBCCTTSSSCBCCC
T ss_pred CEeECCCCCEEE----ECCCCceECCCCCcCCCcCeeC--CCCCCCEEEccCCCEEEECCCCcCCcccCCCCcceECc
Confidence 566554 7889 8999995 5668 7886 3579999999999999999 69999988888888763
No 186
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.22 E-value=4.5e-07 Score=72.58 Aligned_cols=42 Identities=24% Similarity=0.598 Sum_probs=38.6
Q ss_pred ccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 591 KKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 591 ~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
..|+|..+||+|+|+|+..+.++|+|.|+.||.|.+|+++|.
T Consensus 4 d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~ 45 (69)
T 1kli_L 4 DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 45 (69)
T ss_dssp CCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred ccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCccc
Confidence 468999999999999998876579999999999999999998
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.22 E-value=0.00017 Score=78.69 Aligned_cols=287 Identities=10% Similarity=0.003 Sum_probs=145.9
Q ss_pred ecccccCCcceeEEEecCCC--eEEEEEecCCcccceEEEEeCCCCCc-cceEEeeecCceeEEEeeecCCCCCCCCCCE
Q psy14257 254 LDFYYTPTANMVFWTDVIDD--KIYNATLIGNSLSNIDVVVQTGLSTA-EGLAVDWIGKNLYMFWAFWSLSPSNSSDGGI 330 (841)
Q Consensus 254 vd~~~~~~~~~lyw~d~~~~--~I~~~~~~~~~~~~~~~~~~~~l~~p-~giavD~~~~~~y~~~td~~~~~~~~~~~~I 330 (841)
..|.+..+. |+++-...+ .|+..++.++. ...+. .+-..+ .++++.+.++.+++. . .+..|
T Consensus 41 ~~~SpDg~~--l~~~~~~~g~~~l~~~d~~~g~---~~~lt-~~~~~~~~~~~~spdg~~l~~~--~--------~~~~l 104 (388)
T 3pe7_A 41 KCFTRDGSK--LLFGGAFDGPWNYYLLDLNTQV---ATQLT-EGRGDNTFGGFLSPDDDALFYV--K--------DGRNL 104 (388)
T ss_dssp CCBCTTSCE--EEEEECTTSSCEEEEEETTTCE---EEECC-CSSCBCSSSCEECTTSSEEEEE--E--------TTTEE
T ss_pred ccCCCCCCE--EEEEEcCCCCceEEEEeCCCCc---eEEee-eCCCCCccceEEcCCCCEEEEE--e--------CCCeE
Confidence 345444332 444433233 57777776653 12221 111112 256777766555442 1 12468
Q ss_pred EEEccCCCccccccccCcCCCc--eEEEEccCCEEEEEe---------------------CCCCeEEEEEecCCccEEEE
Q psy14257 331 EKAGMHGENRSPLVTKNIQWPS--SLVIDYNQDILYWCD---------------------SHLNTVESVRVDGSERTVSF 387 (841)
Q Consensus 331 ~~~~~dG~~~~~l~~~~~~~P~--glavD~~~~~lYwaD---------------------~~~~~I~~~~ldG~~~~~~~ 387 (841)
++.++++...+.+....-.+.. ..++++++..|+... .....|++++++++..+.+.
T Consensus 105 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 184 (388)
T 3pe7_A 105 MRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL 184 (388)
T ss_dssp EEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE
T ss_pred EEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee
Confidence 8888876655544332222111 122355555554322 12357888888776665554
Q ss_pred eeeeecCCCccccCCCCCCcccc-ccceEEEEecC-----CCcEEEEccCCceEEEEecCCC-CCceeEEEcCCCCeEEE
Q psy14257 388 NLEVLGSDSRVGIPNCRPEDNLW-IGKNLYWVESN-----LDQIEVAKLSGQFRRTLIAGDM-ESPRAIALDPRFGLLFW 460 (841)
Q Consensus 388 ~~~~~~~~~~~~i~~~~~~avdw-~~~~LY~tD~~-----~~~I~v~~~~G~~~~~l~~~~l-~~P~giavd~~~g~Ly~ 460 (841)
....... ..++.. .++.|+++... ..+|++.+++|...+.+..... .....+++.|+..+|++
T Consensus 185 ~~~~~~~----------~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (388)
T 3pe7_A 185 QENQWLG----------HPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVY 254 (388)
T ss_dssp EESSCEE----------EEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEE
T ss_pred cCCcccc----------ccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEE
Confidence 3211000 011222 33556555432 4589999988876655543221 12446789998777755
Q ss_pred EecCCCCC--eEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEe--------CCCCeEEEEEcCCCeeEE
Q psy14257 461 TDWDSKAP--RIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWID--------AKSDSIHTVTYDGKDHHV 530 (841)
Q Consensus 461 td~~~~~~--~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d--------~~~~~I~~~~~dG~~~~~ 530 (841)
+....... .|++.++++...+.+............|.++++.+++++|+++- .....|+.+++++...+.
T Consensus 255 ~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~ 334 (388)
T 3pe7_A 255 VSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHR 334 (388)
T ss_dssp EEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEE
T ss_pred EecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEE
Confidence 44321233 49999998777666544210000001256667777777787653 445689999999887766
Q ss_pred EEcCCCCCC--------cceEEEE--ecCeEEEEeCCC--CeEEEEec
Q psy14257 531 VLSNHDSLT--------HPFAIAL--FENHVYWTDWRT--NSVIRANK 566 (841)
Q Consensus 531 i~~~~~~l~--------~P~gla~--~~~~lY~td~~~--~~i~~~~~ 566 (841)
+........ ....+++ .+.+||++.... ..|++++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 335 VARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp EEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 654432000 1234455 345777765433 23445443
No 188
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.22 E-value=7.3e-07 Score=63.70 Aligned_cols=38 Identities=37% Similarity=0.886 Sum_probs=34.1
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+. +.||+.+++|||..+|.+|+||..|
T Consensus 2 ~~C~~~~F~C~~~-g~CI~~~~~CDg~~DC~DgSDE~~C 39 (42)
T 1cr8_A 2 GGCHTDEFQCRLD-GLCIPLRWRCDGDTDCMDSSDEKSC 39 (42)
T ss_dssp CCSSTTCEECTTT-CCEECGGGSSSSSCCSSSSTTTTTC
T ss_pred CCCCCCceEeCCC-CeEcChhhcCCCCcCCCCCCcccCC
Confidence 3688899999865 8999999999999999999999766
No 189
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.21 E-value=0.00014 Score=77.51 Aligned_cols=146 Identities=13% Similarity=0.177 Sum_probs=98.1
Q ss_pred eEEEEecC--CCcEEEEccCC--ceEEEEe------cCCCCCceeEEE--cCCCC--eEEEEecCCCCCeEEEecC----
Q psy14257 414 NLYWVESN--LDQIEVAKLSG--QFRRTLI------AGDMESPRAIAL--DPRFG--LLFWTDWDSKAPRIERCSM---- 475 (841)
Q Consensus 414 ~LY~tD~~--~~~I~v~~~~G--~~~~~l~------~~~l~~P~giav--d~~~g--~Ly~td~~~~~~~I~r~~l---- 475 (841)
.+|.++.. .++|.+++++. ...+.+. ...+..|.||++ ++..+ ++|+++.. ++++...+
T Consensus 88 la~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~---G~~~q~~l~~~~ 164 (355)
T 3amr_A 88 IAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE---GEFEQYELKADK 164 (355)
T ss_dssp EEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS---SEEEEEEEEECT
T ss_pred EEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC---CeEEEEEEEeCC
Confidence 57899988 89999997752 2333331 245689999999 88767 57777743 57766555
Q ss_pred CCCCc-EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC--CCe-eEEEEc-CCCCCC-cceEEEEe-c
Q psy14257 476 SGEHR-SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD--GKD-HHVVLS-NHDSLT-HPFAIALF-E 548 (841)
Q Consensus 476 dG~~~-~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d--G~~-~~~i~~-~~~~l~-~P~gla~~-~ 548 (841)
+|... +.+-.. ..-..|.|+++|...++||+++... .|++++.+ +.. .+.+.. ..+.+. .|.||+++ .
T Consensus 165 ~g~~~~~lVR~f----~lgsq~EgcvvDd~~g~Lyv~eEd~-GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~ 239 (355)
T 3amr_A 165 NGYISGKKVRAF----KMNSQTEGMAADDEYGRLYIAEEDE-AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYA 239 (355)
T ss_dssp TSCEEEEEEEEE----ECSSCEEEEEEETTTTEEEEEETTT-EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEEC
T ss_pred CCcccceEEEEe----cCCCCcceEEEcCCCCeEEEecccc-eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEec
Confidence 23222 222222 1234799999999999999999975 49999955 322 233322 122343 79999995 2
Q ss_pred ----CeEEEEeCCCCeEEEEecc
Q psy14257 549 ----NHVYWTDWRTNSVIRANKW 567 (841)
Q Consensus 549 ----~~lY~td~~~~~i~~~~~~ 567 (841)
++|++++.++++...++..
T Consensus 240 ~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 240 ADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp GGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCCEEEEEEcCCCCEEEEEECC
Confidence 5899999888887777653
No 190
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.20 E-value=0.0082 Score=65.47 Aligned_cols=280 Identities=7% Similarity=-0.067 Sum_probs=156.0
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
....|+++|...+|+.... .+.|...+.+|.....+. ..-.....+++.+.+..|+.+.. .+.|...++.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~---dg~i~i~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~ 179 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVE---NGELRLWNKTGALLNVLN------FHRAPIVSVKWNKDGTHIISMDV-ENVTILWNVI 179 (425)
T ss_dssp CEEEEEECTTSSEEEEEET---TSCEEEEETTSCEEEEEC------CCCSCEEEEEECTTSSEEEEEET-TCCEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCeeeecc------CCCccEEEEEECCCCCEEEEEec-CCeEEEEECC
Confidence 5778999998667766654 356666666665444432 23445688999887777776654 6788888886
Q ss_pred CCeeEEEEcCCCCCC-------------cceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcc
Q psy14257 525 GKDHHVVLSNHDSLT-------------HPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVK 591 (841)
Q Consensus 525 G~~~~~i~~~~~~l~-------------~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~ 591 (841)
.......+....... ....+++..+..+++-...+.|...+..+++....+...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~------------- 246 (425)
T 1r5m_A 180 SGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGH------------- 246 (425)
T ss_dssp TTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCC-------------
T ss_pred CCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccC-------------
Confidence 554433332211100 044556544444455455566666665544333222110
Q ss_pred cCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEEEEecCCCCccccceeecCCCCC
Q psy14257 592 KSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIRGVDLEHPYYHTIPTISIPQVFS 670 (841)
Q Consensus 592 ~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~~ 670 (841)
.....+. .+.++ ..+|+.+. ...|+..++..... ...+. .....
T Consensus 247 -------------------~~~i~~~-----~~~~~--------~~~l~~~~~d~~i~i~d~~~~~~--~~~~~-~~~~~ 291 (425)
T 1r5m_A 247 -------------------HGPISVL-----EFNDT--------NKLLLSASDDGTLRIWHGGNGNS--QNCFY-GHSQS 291 (425)
T ss_dssp -------------------SSCEEEE-----EEETT--------TTEEEEEETTSCEEEECSSSBSC--SEEEC-CCSSC
T ss_pred -------------------CCceEEE-----EECCC--------CCEEEEEcCCCEEEEEECCCCcc--ceEec-CCCcc
Confidence 0001110 11111 12333333 44566665543221 11111 12245
Q ss_pred ceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCC
Q psy14257 671 PNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQ 750 (841)
Q Consensus 671 ~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~ 750 (841)
+..++|.+.. ++++-...+.|+..++.... ....+......+..|++.+.++
T Consensus 292 i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--------------------------~~~~~~~~~~~i~~~~~s~~~~ 343 (425)
T 1r5m_A 292 IVSASWVGDD--KVISCSMDGSVRLWSLKQNT--------------------------LLALSIVDGVPIFAGRISQDGQ 343 (425)
T ss_dssp EEEEEEETTT--EEEEEETTSEEEEEETTTTE--------------------------EEEEEECTTCCEEEEEECTTSS
T ss_pred EEEEEECCCC--EEEEEeCCCcEEEEECCCCc--------------------------EeEecccCCccEEEEEEcCCCC
Confidence 7889999876 44555578899998886544 2223333455788899998887
Q ss_pred cEEEEecCCCCCeEEEEecCCcc--------------------eEEEEcCCCCCCCcCC--CceEEEEeCCCCeEEEEec
Q psy14257 751 NMFIAVSSPTQSKIVVCNLEGEY--------------------QTTILSNESNDTSTLS--KISSIAVWPVKGKMFWSNV 808 (841)
Q Consensus 751 ~LYw~~~~~~~~~I~v~~l~g~~--------------------~~~~~~~~~~~~~~l~--~p~~iavd~~~g~lyw~d~ 808 (841)
.|+... ..+.|.+.++.... ....+... .. .+..+++.|...+|+-...
T Consensus 344 ~l~~~~---~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~ 414 (425)
T 1r5m_A 344 KYAVAF---MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSS------QDNDYIFDLSWNCAGNKISVAYS 414 (425)
T ss_dssp EEEEEE---TTSCEEEEECHHHHC--------------CEECCEEEEECCT------TCCCCEEEEEECTTSSEEEEEES
T ss_pred EEEEEE---CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCc------ccCCceEEEEccCCCceEEEEec
Confidence 776663 46789999987544 22222220 22 7889999988777766554
Q ss_pred CCCcceEEEEecCC
Q psy14257 809 TKQVVTIEMAFMDG 822 (841)
Q Consensus 809 ~~~~~~I~~~~~dG 822 (841)
.. +|...+++|
T Consensus 415 dg---~i~iw~~~g 425 (425)
T 1r5m_A 415 LQ---EGSVVAIPG 425 (425)
T ss_dssp SS---CCEEEECCC
T ss_pred Cc---eEEEEeecC
Confidence 33 466666655
No 191
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.19 E-value=2.8e-05 Score=87.38 Aligned_cols=209 Identities=13% Similarity=0.112 Sum_probs=123.8
Q ss_pred ccccCcCCCceEEEEccCC-EEEEEeCCCCeEEEEEecCCcc-EEEEeee-eecC-------CCccccCCCCCCcccc--
Q psy14257 343 LVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSER-TVSFNLE-VLGS-------DSRVGIPNCRPEDNLW-- 410 (841)
Q Consensus 343 l~~~~~~~P~glavD~~~~-~lYwaD~~~~~I~~~~ldG~~~-~~~~~~~-~~~~-------~~~~~i~~~~~~avdw-- 410 (841)
++...|..|.+|++.+++. +||+++. .++|++++.+|... +.+..+. ++.. ...+++ |++.
T Consensus 8 ~va~gL~~P~~~a~~pdG~~rl~V~er-~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgi------a~~P~f 80 (463)
T 2wg3_C 8 EVVSGLRQPVGALHSGDGSQRLFILEK-EGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSL------AFHPNY 80 (463)
T ss_dssp EEEEEESSEEEEECCSSSSCCEEEEET-TTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEE------EECTTH
T ss_pred EeccCCCCceEEEECCCCCeEEEEEeC-CceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceee------EeCCCC
Confidence 3455789999999999874 8999997 47899998777532 2222221 1111 111222 2322
Q ss_pred -ccceEEEEecC------------CCcEEEEccCC--------ceEEEEec----CCCCCceeEEEcCCCCeEEEEecCC
Q psy14257 411 -IGKNLYWVESN------------LDQIEVAKLSG--------QFRRTLIA----GDMESPRAIALDPRFGLLFWTDWDS 465 (841)
Q Consensus 411 -~~~~LY~tD~~------------~~~I~v~~~~G--------~~~~~l~~----~~l~~P~giavd~~~g~Ly~td~~~ 465 (841)
.++.||++-+. ..+|.++.++. ...++|+. ........|+++|+ |+||++--..
T Consensus 81 ~~n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpD-G~LYv~~Gd~ 159 (463)
T 2wg3_C 81 KKNGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPD-GFLYIILGDG 159 (463)
T ss_dssp HHHCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTT-SCEEEEECCT
T ss_pred cCCCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCC-CcEEEEeCCC
Confidence 24788987542 13777777742 11233332 22455678999985 8999994321
Q ss_pred ---------------CCCeEEEecCCCCC-------------------cEEEEEecccCCCCCCceeEEEeccCC-----
Q psy14257 466 ---------------KAPRIERCSMSGEH-------------------RSVIVRVDLLTSRGAWPNGLTLDYQLT----- 506 (841)
Q Consensus 466 ---------------~~~~I~r~~ldG~~-------------------~~~i~~~~~~~~~~~~P~glalD~~~~----- 506 (841)
..++|.|++.||+. +..|.. ..+..|.||++|+.++
T Consensus 160 ~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a-----~G~RNp~gla~dp~tg~~~G~ 234 (463)
T 2wg3_C 160 MITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFA-----HGLHDPGRCAVDRHPTDININ 234 (463)
T ss_dssp TCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEE-----ECCSSCCBEEEESSCSSTTCS
T ss_pred CCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEE-----ECCCCcceEEECCCCCCcccc
Confidence 14689999999951 223444 4899999999998744
Q ss_pred -EEEEEeC-C----CCeEEEEEcCCCe----eEEEEcCCCCCCcceEEEEecC--------eEEEEeCCCCeEEEEec
Q psy14257 507 -RIYWIDA-K----SDSIHTVTYDGKD----HHVVLSNHDSLTHPFAIALFEN--------HVYWTDWRTNSVIRANK 566 (841)
Q Consensus 507 -~LYw~d~-~----~~~I~~~~~dG~~----~~~i~~~~~~l~~P~gla~~~~--------~lY~td~~~~~i~~~~~ 566 (841)
+||.+|. + ...|..+.. |.+ ..++.-....-..|.|++++.+ .++++++. ++|+++..
T Consensus 235 l~~~~~D~~G~~~~~~ei~~i~~-G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~ 310 (463)
T 2wg3_C 235 LTILCSDSNGKNRSSARILQIIK-GKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQ 310 (463)
T ss_dssp EEEEEECC------CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC
T ss_pred eEEEecccCCCCCCCCeEeeecc-CCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEe
Confidence 7888885 2 124544422 221 1111111100135788988654 48888886 67877753
No 192
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.19 E-value=6.4e-07 Score=62.07 Aligned_cols=36 Identities=39% Similarity=0.915 Sum_probs=32.7
Q ss_pred CCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 94 ACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 94 ~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
+|.+.+|.|.+ +.||+.+++|||..+|.+|+||..|
T Consensus 1 ~C~~~~f~C~~--g~Ci~~~~~CDg~~DC~DgsDE~~C 36 (37)
T 1ajj_A 1 PCSAFEFHCLS--GECIHSSWRCDGGPDCKDKSDEENC 36 (37)
T ss_dssp CCCTTCEECTT--SCEECGGGTTSSSCCSTTCGGGTTC
T ss_pred CCCCCceEcCC--CCeechhhccCCCCCCCCCccccCC
Confidence 37788999998 8999999999999999999999766
No 193
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.18 E-value=0.00017 Score=74.55 Aligned_cols=206 Identities=10% Similarity=0.030 Sum_probs=128.1
Q ss_pred CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC-CccccccccC-cCCCceEEEEccCCEEEEEeCC---CCe
Q psy14257 298 TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-ENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSH---LNT 372 (841)
Q Consensus 298 ~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-~~~~~l~~~~-~~~P~glavD~~~~~lYwaD~~---~~~ 372 (841)
.+..+++.+.++ +++... ++.|..+++++ .....+.... ...+..+++.++++.|+++... ...
T Consensus 43 ~v~~~~~spdg~--~l~~~~---------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 43 LFEAPNWSPDGK--YLLLNS---------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA 111 (297)
T ss_dssp CCEEEEECTTSS--EEEEEE---------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE
T ss_pred ceEeeEECCCCC--EEEEEc---------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce
Confidence 456677776553 333321 34888898877 5555444332 3556789999999999998843 578
Q ss_pred EEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCC--cEEEEccCCceEEEEecCCCCCceeEE
Q psy14257 373 VESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLD--QIEVAKLSGQFRRTLIAGDMESPRAIA 450 (841)
Q Consensus 373 I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~--~I~v~~~~G~~~~~l~~~~l~~P~gia 450 (841)
|+.+++++...+.+...... .. .++...+..|+++....+ +|+.+++++.....+. .....+..++
T Consensus 112 l~~~~~~~~~~~~~~~~~~~-----~~------~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~ 179 (297)
T 2ojh_A 112 IYLLPSTGGTPRLMTKNLPS-----YW------HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPD 179 (297)
T ss_dssp EEEEETTCCCCEECCSSSSE-----EE------EEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEE
T ss_pred EEEEECCCCceEEeecCCCc-----cc------eEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccce
Confidence 88888877665544221100 00 012223366776655555 4555556655544433 3335678999
Q ss_pred EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC----------CCeEEE
Q psy14257 451 LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK----------SDSIHT 520 (841)
Q Consensus 451 vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~----------~~~I~~ 520 (841)
++|...+|+++.......+|+.+++++.....+.. .......+++++.+..|+++... ...|+.
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~ 253 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQL 253 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEE
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEE
Confidence 99988888887643236789999887765544432 22345678888888888876542 256888
Q ss_pred EEcCCCeeEEEE
Q psy14257 521 VTYDGKDHHVVL 532 (841)
Q Consensus 521 ~~~dG~~~~~i~ 532 (841)
+++++.....+.
T Consensus 254 ~d~~~~~~~~~~ 265 (297)
T 2ojh_A 254 MDMDGGNVETLF 265 (297)
T ss_dssp EETTSCSCEEEE
T ss_pred EecCCCCceeee
Confidence 998876554443
No 194
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.15 E-value=1.4e-06 Score=64.62 Aligned_cols=42 Identities=31% Similarity=0.850 Sum_probs=36.2
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccccccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDEKQ 135 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~eC~ 135 (841)
..|.+.+|.|.+. +.||+..++|||..||.+|+||..|..|.
T Consensus 5 ~~C~~~~F~C~~~-g~CI~~~~~CDG~~DC~DgSDE~~C~~C~ 46 (50)
T 2knx_A 5 KTCGPSSFSCPGT-HVCVPERWLCDGDKDCADGADESIAAGCL 46 (50)
T ss_dssp CTTCTTEEEETTT-TEEEETTTTTSSSCCSTTCGGGSGGGTCC
T ss_pred CCCCCCcEEcCCC-CeEcChhhcCCCCCCCCCCCccccccCCC
Confidence 4588899999633 89999999999999999999998875554
No 195
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.14 E-value=0.02 Score=66.02 Aligned_cols=419 Identities=10% Similarity=0.000 Sum_probs=215.4
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCC---CccceEEeee-cCceeEEEeeecCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLS---TAEGLAVDWI-GKNLYMFWAFWSLSPSN 324 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~---~p~giavD~~-~~~~y~~~td~~~~~~~ 324 (841)
..+.++.|...... ++.+-...+.|...++..+. ....+..... ....+++.+. ++ +++-.
T Consensus 161 ~~v~~~~~~~~~~~--~l~~~~~d~~v~vwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~--~l~~~-------- 225 (615)
T 1pgu_A 161 QRINACHLKQSRPM--RSMTVGDDGSVVFYQGPPFK---FSASDRTHHKQGSFVRDVEFSPDSGE--FVITV-------- 225 (615)
T ss_dssp SCEEEEEECSSSSC--EEEEEETTTEEEEEETTTBE---EEEEECSSSCTTCCEEEEEECSTTCC--EEEEE--------
T ss_pred ccEEEEEECCCCCc--EEEEEeCCCcEEEEeCCCcc---eeeeecccCCCCceEEEEEECCCCCC--EEEEE--------
Confidence 34667778776443 56666677888877765432 1222222222 3456677654 32 22211
Q ss_pred CCCCCEEEEccC-CCccccccc---cCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCcccc
Q psy14257 325 SSDGGIEKAGMH-GENRSPLVT---KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGI 400 (841)
Q Consensus 325 ~~~~~I~~~~~d-G~~~~~l~~---~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i 400 (841)
..++.|..+++. |+....+.. ..-.....+++. .++.| ++-...+.|...++........+.... ....
T Consensus 226 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~--~~~~--- 298 (615)
T 1pgu_A 226 GSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKF-ATVGADATIRVWDVTTSKCVQKWTLDK--QQLG--- 298 (615)
T ss_dssp ETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEE-EEEETTSEEEEEETTTTEEEEEEECCT--TCGG---
T ss_pred eCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEE-EEEcCCCcEEEEECCCCcEEEEEcCCC--Cccc---
Confidence 235688888865 443333323 334456678887 44444 444456788888887443322222110 0000
Q ss_pred CCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc
Q psy14257 401 PNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR 480 (841)
Q Consensus 401 ~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~ 480 (841)
....++.|..+...++-...+.|.+.++........+.........+++ |. |+.... .+.|...++.
T Consensus 299 --~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~---dg~i~~w~~~---- 365 (615)
T 1pgu_A 299 --NQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSY---DGRIMEWSSS---- 365 (615)
T ss_dssp --GCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEET---TSCEEETTTT----
T ss_pred --CceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECC---CCeEEEEEch----
Confidence 0001222323555566666788888888754333333344456778888 65 333332 4566666665
Q ss_pred EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEec-CeEEEEeCCCC
Q psy14257 481 SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFE-NHVYWTDWRTN 559 (841)
Q Consensus 481 ~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~-~~lY~td~~~~ 559 (841)
.+.. ..-.....+++ ..++.|+.+. ..+.|...++.... ....|..+++.. +.+.++. ..+
T Consensus 366 -~~~~-----~~~~~v~~~~~-~~~~~l~~~~-~d~~i~~~~~~~~~---------~~~~~~~~~~s~~~~~~~~~-~~~ 427 (615)
T 1pgu_A 366 -SMHQ-----DHSNLIVSLDN-SKAQEYSSIS-WDDTLKVNGITKHE---------FGSQPKVASANNDGFTAVLT-NDD 427 (615)
T ss_dssp -EEEC-----CCCSCEEEEEC-CSTTCCEEEE-TTTEEEETTEEEEE---------CSSCEEEEEECSSSEEEEEE-TTS
T ss_pred -hhcC-----cccCceEEEEE-CCCcEEEEEe-CCCCEEEEEcccCc---------ccCCceEEEEcCCCCEEEEe-CCC
Confidence 1111 23334456666 3344444333 34555555433211 122566777743 4444443 445
Q ss_pred eEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeE
Q psy14257 560 SVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFI 639 (841)
Q Consensus 560 ~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l 639 (841)
.+...+..+++....+... ...++.+-. ..+|
T Consensus 428 ~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~---------------~~~l 459 (615)
T 1pgu_A 428 DLLILQSFTGDIIKSVRLN---------------------------------SPGSAVSLS---------------QNYV 459 (615)
T ss_dssp EEEEEETTTCCEEEEEECS---------------------------------SCEEEEEEC---------------SSEE
T ss_pred ceEEEeccCCceeeecccC---------------------------------CCceEEEEc---------------CCEE
Confidence 5555554444433322200 000111100 1223
Q ss_pred Eeec--CCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeeccc
Q psy14257 640 IFSR--PREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTP 717 (841)
Q Consensus 640 ~~~~--~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 717 (841)
+.+. ...|+..++....... .........+.+++|.|..+.|.... ..+.|+..++....
T Consensus 460 ~~~~~~d~~i~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~g~~l~~~~-~dg~i~iw~~~~~~--------------- 521 (615)
T 1pgu_A 460 AVGLEEGNTIQVFKLSDLEVSF--DLKTPLRAKPSYISISPSETYIAAGD-VMGKILLYDLQSRE--------------- 521 (615)
T ss_dssp EEEETTTSCEEEEETTEEEEEE--ECSSCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE---------------
T ss_pred EEeecCCCeEEEEECCCccccc--cccCCccCceEEEEECCCCCEEEEcC-CCCeEEEeeCCCCc---------------
Confidence 3333 3445555554321100 00011224578999999888887776 57889998886544
Q ss_pred ccccccccCceEEEEeeC-CCCCcceeEEee----------cCCcEEEEecCCCCCeEEEEecCCc-ceEEEEcCCCCCC
Q psy14257 718 LSKRSSIVGGQIQLVVDA-GISHPSGLAIDW----------IAQNMFIAVSSPTQSKIVVCNLEGE-YQTTILSNESNDT 785 (841)
Q Consensus 718 ~~~~~~~~~~~~~~i~~~-~~~~p~glAvD~----------~~~~LYw~~~~~~~~~I~v~~l~g~-~~~~~~~~~~~~~ 785 (841)
....+.. ....+..|++.+ .++.|.... ..++|.+.++... .....+.+
T Consensus 522 -----------~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~---~dg~i~iw~~~~~~~~~~~~~~----- 582 (615)
T 1pgu_A 522 -----------VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGS---LDTNIFIYSVKRPMKIIKALNA----- 582 (615)
T ss_dssp -----------EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEE---TTSCEEEEESSCTTCCEEETTS-----
T ss_pred -----------ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEc---CCCcEEEEECCCCceechhhhc-----
Confidence 1111222 456688899988 676666652 4678999999765 22222222
Q ss_pred CcCCCceEEEEeCCCCeEEEEe
Q psy14257 786 STLSKISSIAVWPVKGKMFWSN 807 (841)
Q Consensus 786 ~~l~~p~~iavd~~~g~lyw~d 807 (841)
-.....+|+..|... |.-..
T Consensus 583 -h~~~v~~l~~s~~~~-l~s~~ 602 (615)
T 1pgu_A 583 -HKDGVNNLLWETPST-LVSSG 602 (615)
T ss_dssp -STTCEEEEEEEETTE-EEEEE
T ss_pred -CccceEEEEEcCCCC-eEEec
Confidence 035788899988755 44433
No 196
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.13 E-value=0.00012 Score=77.85 Aligned_cols=180 Identities=20% Similarity=0.217 Sum_probs=112.8
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccC-------CEEEEEeCC--CCeEEEEEecCCccEEEEeeee----ecC-
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ-------DILYWCDSH--LNTVESVRVDGSERTVSFNLEV----LGS- 394 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~-------~~lYwaD~~--~~~I~~~~ldG~~~~~~~~~~~----~~~- 394 (841)
.+..++++|+.+..+ +.++++++.+-+.- +.+|.++.. .++|..+++|....+ +..... +..
T Consensus 51 gL~Vydl~G~~l~~~---~~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 51 GLVVYSLDGKMLHSY---NTGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTDPDHPIATA 126 (355)
T ss_dssp EEEEEETTSCEEEEE---CCSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSCTTSCEECC
T ss_pred CEEEEcCCCcEEEEc---cCCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccccccCcCCC
Confidence 455667777665554 23678888877632 267999998 999999988754332 221110 000
Q ss_pred -CCccccCCCCCCcc--ccccce--EEEEecCCCcEEEEcc----CC----ceEEEEecCCCCCceeEEEcCCCCeEEEE
Q psy14257 395 -DSRVGIPNCRPEDN--LWIGKN--LYWVESNLDQIEVAKL----SG----QFRRTLIAGDMESPRAIALDPRFGLLFWT 461 (841)
Q Consensus 395 -~~~~~i~~~~~~av--dw~~~~--LY~tD~~~~~I~v~~~----~G----~~~~~l~~~~l~~P~giavd~~~g~Ly~t 461 (841)
..+.|+ ++ +..++. +|+++.. +++..+.+ +| +.++.+-.. .+|.|+++|+..|+||++
T Consensus 127 ~~~pyGl------cly~~~~~g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 127 INEVYGF------TLYHSQKTGKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp CSSCCCE------EEEECTTTCCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTTEEEEE
T ss_pred CCCeeEE------EEEecCCCCcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCCeEEEe
Confidence 111111 22 233353 6666665 77777655 23 223333322 589999999999999999
Q ss_pred ecCCCCCeEEEecCCCC---CcEEEEEecccCCCCC-CceeEEEeccC---CEEEEEeCCCCeEEEEEcCCC
Q psy14257 462 DWDSKAPRIERCSMSGE---HRSVIVRVDLLTSRGA-WPNGLTLDYQL---TRIYWIDAKSDSIHTVTYDGK 526 (841)
Q Consensus 462 d~~~~~~~I~r~~ldG~---~~~~i~~~~~~~~~~~-~P~glalD~~~---~~LYw~d~~~~~I~~~~~dG~ 526 (841)
+.. ..|++++.+.. .++.+.... ...+. .|.||+|.+.. ++|++++.+++....++..+.
T Consensus 198 eEd---~GIw~~da~p~~~~~~~~v~~~~--~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 198 EED---EAIWKFSAEPDGGSNGTVIDRAD--GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp ETT---TEEEEEECSTTSCSCCEEEEEBS--SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred ccc---ceEEEEeCCcCCCCCceEEEEec--CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 976 45999996532 244443321 12343 79999997443 589999999999999988753
No 197
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.13 E-value=1.4e-07 Score=92.16 Aligned_cols=58 Identities=24% Similarity=0.486 Sum_probs=46.3
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCccccCCCC
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTD 75 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C~~dC~~ 75 (841)
+|||..|+|||..||.|||||. +|+..+|.+.+|+|. + + ...|. +.+++..|...|..
T Consensus 68 ~CIp~~~~CDG~~DC~DgSDE~--~C~~~~C~~~~F~c~------~-----~-~~~C~--~~~~~~~c~~~~s~ 125 (215)
T 2gtl_O 68 QCISKLFVCDGHNDCRNGEDEK--DCTLPTKAGDKFIGD------V-----C-FDHCT--KRRPEHMTLAFESS 125 (215)
T ss_dssp CEEEGGGTTSSSCCSSSCHHHH--CCCCSSCTTCEEEEE------E-----E-EESSC--SSCCSEEEEEEEEE
T ss_pred cCccccccCCCCCcCCCccccc--CCCCCCcCCCceeee------E-----C-CCccc--CCCCCCceeeeecc
Confidence 6999999999999999999998 899889999999993 1 1 23477 77777666555543
No 198
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.12 E-value=1.3e-06 Score=63.25 Aligned_cols=37 Identities=38% Similarity=0.978 Sum_probs=33.8
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
+.|.+.+|+|.+ +.||+.+++|||..+|.+|+||..|
T Consensus 4 ~~C~~~~F~C~~--g~CI~~~~~CDG~~DC~DgSDE~~c 40 (45)
T 1d2l_A 4 PQCQPGEFACAN--SRCIQERWKCDGDNDCLDNSDEAPA 40 (45)
T ss_dssp CBTTBTCEEETT--TEEECGGGTTTSSCTTTTCSTTSTT
T ss_pred CcCCCCceEcCC--CCeEehhhccCCCCCCCCCCCCCCC
Confidence 468889999998 8999999999999999999999765
No 199
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.12 E-value=0.00022 Score=79.31 Aligned_cols=232 Identities=9% Similarity=0.051 Sum_probs=130.4
Q ss_pred ccccccccccccEEEEeccccceeeecccccCCcceeEEEecCC--CeEEEEEecCCcccceEEEEeCCCCCccceEEee
Q psy14257 229 HELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVID--DKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDW 306 (841)
Q Consensus 229 ~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~--~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~ 306 (841)
..|+..++++.....+......+.++.|.+.... |+++.... ..|+..++.++. ... +...-.....+++.|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~--la~~s~~~~~~~i~~~d~~tg~---~~~-l~~~~~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSK--LAYVTFESGRSALVIQTLANGA---VRQ-VASFPRHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTTSSE--EEEEECTTSSCEEEEEETTTCC---EEE-EECCSSCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCE--EEEEEecCCCcEEEEEECCCCc---EEE-eecCCCcccCEEEcC
Confidence 5677777777666666554456778888876544 77765432 588888887654 222 222223455666766
Q ss_pred ecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEE
Q psy14257 307 IGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVS 386 (841)
Q Consensus 307 ~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~ 386 (841)
.++.+++.-+ ......|+.+++.+...+.+.. .-.....+++.+++++|+++...
T Consensus 233 dg~~la~~~~-------~~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdg~~l~~~s~~----------------- 287 (415)
T 2hqs_A 233 DGSKLAFALS-------KTGSLNLYVMDLASGQIRQVTD-GRSNNTEPTWFPDSQNLAFTSDQ----------------- 287 (415)
T ss_dssp TSSEEEEEEC-------TTSSCEEEEEETTTCCEEECCC-CSSCEEEEEECTTSSEEEEEECT-----------------
T ss_pred CCCEEEEEEe-------cCCCceEEEEECCCCCEEeCcC-CCCcccceEECCCCCEEEEEECC-----------------
Confidence 5543332111 0112245555554433322211 11222334444443333333211
Q ss_pred EeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCC
Q psy14257 387 FNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSK 466 (841)
Q Consensus 387 ~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~ 466 (841)
.+..+|++.++++...+.+.. .......++++|...+|+++.....
T Consensus 288 ---------------------------------~g~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 288 ---------------------------------AGRPQVYKVNINGGAPQRITW-EGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp ---------------------------------TSSCEEEEEETTSSCCEECCC-SSSEEEEEEECTTSSEEEEEEECSS
T ss_pred ---------------------------------CCCcEEEEEECCCCCEEEEec-CCCcccCeEECCCCCEEEEEECcCC
Confidence 112245555555443332221 2234567899999888888875422
Q ss_pred CCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCC--eEEEEEcCCCeeEEEE
Q psy14257 467 APRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSD--SIHTVTYDGKDHHVVL 532 (841)
Q Consensus 467 ~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~--~I~~~~~dG~~~~~i~ 532 (841)
...|+..++++...+.+.. . .....+++.+.+..|+++....+ .|+.++++|...+.+.
T Consensus 334 ~~~i~~~d~~~~~~~~l~~------~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~ 394 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVLSS------T-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP 394 (415)
T ss_dssp CEEEEEEETTTCCEEECCC------S-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEECC
T ss_pred ceEEEEEECCCCCEEEecC------C-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEee
Confidence 4689999998766544322 2 26788999988888888765444 7899999988766553
No 200
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.12 E-value=1e-06 Score=68.24 Aligned_cols=38 Identities=26% Similarity=0.830 Sum_probs=35.2
Q ss_pred CCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 595 C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
|..+||+|+|+|+..+.++|+|.|+.||.|.+|+++|.
T Consensus 2 C~~~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~ 39 (59)
T 2wph_E 2 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCE 39 (59)
T ss_dssp TTTGGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEE
T ss_pred CcCCCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCccc
Confidence 77789999999999886679999999999999999998
No 201
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.12 E-value=6.5e-07 Score=66.01 Aligned_cols=39 Identities=33% Similarity=0.738 Sum_probs=34.6
Q ss_pred CCCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 92 APACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 92 ~~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
+..|.+.+|.|.++ ..||+.+++|||..+|.+|+||..|
T Consensus 4 ~~~C~~~~F~C~~g-~~CI~~~~~CDG~~DC~DgSDE~~C 42 (48)
T 2i1p_A 4 VLNCTSAQFKCADG-SSCINSRYRCDGVYDCRDNSDEAGC 42 (48)
T ss_dssp CCCCCSSSEECSSS-SCEECGGGSSSSSCCSSSSHHHHSS
T ss_pred CCCCCCCeeECCCC-CEeCCHhhcCCCCCCCCCCcccccC
Confidence 45688899999983 4999999999999999999999876
No 202
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.12 E-value=6.9e-07 Score=87.38 Aligned_cols=68 Identities=22% Similarity=0.510 Sum_probs=37.6
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc-----ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCcccccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC-----DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLH 173 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C-----~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~ 173 (841)
+|.++ +.|++. +|.| .|+.||.+..| ++|...++.|.+.|.++.++|.|.|++||.|..+++.|.++.
T Consensus 49 pC~ng-g~C~n~~g~y~C----~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~~ 123 (195)
T 1nfu_B 49 PCQNQ-GKCKDGLGEYTC----TCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (195)
T ss_dssp -------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCC-CEeECCCCCeeE----eCCCCceeccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccCC
Confidence 57776 788775 7889 99999988888 468876678999999999999999999999999999998864
No 203
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.11 E-value=0.001 Score=79.16 Aligned_cols=281 Identities=11% Similarity=0.054 Sum_probs=157.5
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
.+.++.|... +. |.++ .++.|+..++.++. ...+ ...-..+..+++.|.++.+.+ +. ++.
T Consensus 83 ~v~~~~~spd-~~--~~~~--~~~~i~~~d~~~~~---~~~l-~~~~~~~~~~~~SpdG~~la~--~~---------~~~ 142 (706)
T 2z3z_A 83 PSFRTLDAGR-GL--VVLF--TQGGLVGFDMLARK---VTYL-FDTNEETASLDFSPVGDRVAY--VR---------NHN 142 (706)
T ss_dssp CCEEEEETTT-TE--EEEE--ETTEEEEEETTTTE---EEEE-ECCTTCCTTCEECTTSSEEEE--EE---------TTE
T ss_pred CceeEEECCC-Ce--EEEE--ECCEEEEEECCCCc---eEEc-cCCcccccCCcCCCCCCEEEE--EE---------CCe
Confidence 3567777765 43 4444 23788888877653 2222 222335667788776644433 21 246
Q ss_pred EEEEccCC-----CccccccccC--------------cCCCceEEEEccCCEEEEEeC----------------------
Q psy14257 330 IEKAGMHG-----ENRSPLVTKN--------------IQWPSSLVIDYNQDILYWCDS---------------------- 368 (841)
Q Consensus 330 I~~~~~dG-----~~~~~l~~~~--------------~~~P~glavD~~~~~lYwaD~---------------------- 368 (841)
|+..++++ ...+.+.... +..+.++++.+++++|+++..
T Consensus 143 i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~ 222 (706)
T 2z3z_A 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKP 222 (706)
T ss_dssp EEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEE
T ss_pred EEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEE
Confidence 77777765 4333332221 233689999999999998852
Q ss_pred ----------CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc--ccceEEEEecCC----CcEEEEccCC
Q psy14257 369 ----------HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW--IGKNLYWVESNL----DQIEVAKLSG 432 (841)
Q Consensus 369 ----------~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw--~~~~LY~tD~~~----~~I~v~~~~G 432 (841)
....|+.+++++...+.+.... .... ....+.| .++.|+++.... ..|.+.++++
T Consensus 223 ~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~-------~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~ 293 (706)
T 2z3z_A 223 LYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--PKEK-------FLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET 293 (706)
T ss_dssp ECCCBTTSCCCEEEEEEEETTTTEEEECCCCS--CTTC-------EEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT
T ss_pred eeCCCCCCCCCeeEEEEEECCCCceEeeccCC--CCce-------eEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC
Confidence 2346777777665543322100 0000 0012223 335577754322 3788888876
Q ss_pred c-eEEEEecCC----CCCceeEEEcC--CCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCcee-EEEecc
Q psy14257 433 Q-FRRTLIAGD----MESPRAIALDP--RFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNG-LTLDYQ 504 (841)
Q Consensus 433 ~-~~~~l~~~~----l~~P~giavd~--~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~g-lalD~~ 504 (841)
. ..+.+.... ......+++.| .+.+||.++.. ...+|+..+++|...+.+.. .-..... +++++.
T Consensus 294 g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~-g~~~l~~~~~~~~~~~~l~~------~~~~v~~~~~~spd 366 (706)
T 2z3z_A 294 GRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRD-GWNHLYLYDTTGRLIRQVTK------GEWEVTNFAGFDPK 366 (706)
T ss_dssp CCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTT-SSCEEEEEETTSCEEEECCC------SSSCEEEEEEECTT
T ss_pred CceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccC-CccEEEEEECCCCEEEecCC------CCeEEEeeeEEcCC
Confidence 5 555444221 11236789998 76666655543 35789999887765544422 1112234 789988
Q ss_pred CCEEEEEeCCCC----eEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCC---CCeEEEEeccCCc
Q psy14257 505 LTRIYWIDAKSD----SIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWR---TNSVIRANKWNGS 570 (841)
Q Consensus 505 ~~~LYw~d~~~~----~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~---~~~i~~~~~~~g~ 570 (841)
+++||++....+ .|+.+++++...+.+... .....+++. +.+|.++-.. ...|+.++..+++
T Consensus 367 g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~----~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 367 GTRLYFESTEASPLERHFYCIDIKGGKTKDLTPE----SGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp SSEEEEEESSSCTTCBEEEEEETTCCCCEESCCS----SSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CCEEEEEecCCCCceEEEEEEEcCCCCceeccCC----CceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 889998876654 899999887665544321 224556663 3345444221 2457777765555
No 204
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.11 E-value=0.015 Score=61.18 Aligned_cols=275 Identities=9% Similarity=-0.018 Sum_probs=154.4
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC-cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH-RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHT 520 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~-~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~ 520 (841)
.-.....++++|...+|+... .+.|...+++... ...+.... ....-.....+++.+.+..|+.+. ..+.|..
T Consensus 50 h~~~v~~~~~~~~~~~l~~~~----dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~ 123 (337)
T 1gxr_A 50 HGEVVCAVTISNPTRHVYTGG----KGCVKVWDISHPGNKSPVSQLD-CLNRDNYIRSCKLLPDGCTLIVGG-EASTLSI 123 (337)
T ss_dssp CSSCCCEEEECSSSSEEEEEC----BSEEEEEETTSTTCCSCSEEEE-CSCTTSBEEEEEECTTSSEEEEEE-SSSEEEE
T ss_pred CCCceEEEEEecCCcEEEEcC----CCeEEEEECCCCCceeeeeccc-ccCCCCcEEEEEEcCCCCEEEEEc-CCCcEEE
Confidence 335678999999877776655 2566666654322 11111100 001234567899998766666554 4678999
Q ss_pred EEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCC
Q psy14257 521 VTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNN 599 (841)
Q Consensus 521 ~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~n 599 (841)
.+++...................+++. ++.++++-...+.|...+..+++....+....
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~-------------------- 183 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT-------------------- 183 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--------------------
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc--------------------
Confidence 998876532221111112334667774 34444444455677777765554333222100
Q ss_pred CCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEecCCCCccccceeecCCCCCceEEEEec
Q psy14257 600 GNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDA 678 (841)
Q Consensus 600 g~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~ 678 (841)
+... ..+..|+ ..+|+.+ ....|+..++..... ... ......+..++|.+
T Consensus 184 ~~i~----------~~~~~~~---------------~~~l~~~~~dg~i~~~d~~~~~~--~~~--~~~~~~v~~~~~s~ 234 (337)
T 1gxr_A 184 DGAS----------CIDISND---------------GTKLWTGGLDNTVRSWDLREGRQ--LQQ--HDFTSQIFSLGYCP 234 (337)
T ss_dssp SCEE----------EEEECTT---------------SSEEEEEETTSEEEEEETTTTEE--EEE--EECSSCEEEEEECT
T ss_pred CceE----------EEEECCC---------------CCEEEEEecCCcEEEEECCCCce--Eee--ecCCCceEEEEECC
Confidence 0000 0111111 1223333 344566666543321 111 12224578899999
Q ss_pred CCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecC
Q psy14257 679 ANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSS 758 (841)
Q Consensus 679 ~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~ 758 (841)
..+.|+... ..+.|+..++.... ... +......+..|++.+.++.|+..
T Consensus 235 ~~~~l~~~~-~~~~i~~~~~~~~~--------------------------~~~-~~~~~~~v~~~~~~~~~~~l~~~--- 283 (337)
T 1gxr_A 235 TGEWLAVGM-ESSNVEVLHVNKPD--------------------------KYQ-LHLHESCVLSLKFAYCGKWFVST--- 283 (337)
T ss_dssp TSSEEEEEE-TTSCEEEEETTSSC--------------------------EEE-ECCCSSCEEEEEECTTSSEEEEE---
T ss_pred CCCEEEEEc-CCCcEEEEECCCCC--------------------------eEE-EcCCccceeEEEECCCCCEEEEe---
Confidence 888888776 57889988887654 222 23345678899999888777666
Q ss_pred CCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecC
Q psy14257 759 PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVT 809 (841)
Q Consensus 759 ~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~ 809 (841)
...+.|.+.++........... -..+.++++.|...+|+-....
T Consensus 284 ~~dg~i~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~l~~~~~d 327 (337)
T 1gxr_A 284 GKDNLLNAWRTPYGASIFQSKE-------SSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC-------SSCEEEEEECTTSCEEEEEETT
T ss_pred cCCCcEEEEECCCCeEEEEecC-------CCcEEEEEECCCCCEEEEecCC
Confidence 2468899999876654433333 3678899999987777665543
No 205
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.10 E-value=7.7e-07 Score=66.01 Aligned_cols=37 Identities=35% Similarity=0.899 Sum_probs=34.1
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+ +.||+.+++|||..||.||+||..|
T Consensus 5 ~~C~~~~F~C~n--G~CIp~~~~CDG~~DC~DgSDE~~~ 41 (52)
T 2m0p_A 5 ASCLDTQYTCDN--HQCISKNWVCDTDNDCGDGSDEKNC 41 (52)
T ss_dssp CSSCSSEEECTT--CCEEETTSTTSSSCSSSSCHHHHSC
T ss_pred CCCCCCceECCC--CCEEecCccCCCCCCCCCCCccccc
Confidence 568889999998 8999999999999999999999766
No 206
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.10 E-value=1.9e-06 Score=60.48 Aligned_cols=37 Identities=46% Similarity=0.937 Sum_probs=32.4
Q ss_pred CCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 95 C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
|++.+|.|.+.++.||+.+++|||..+|.+|+||..|
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~C 37 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENC 37 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTTC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCcccccC
Confidence 5678899987227999999999999999999999776
No 207
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.09 E-value=1.5e-06 Score=62.46 Aligned_cols=38 Identities=34% Similarity=0.785 Sum_probs=34.3
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+++|.|.+. +.||+..++|||..+|.+|+||..|
T Consensus 5 ~~C~~~~f~C~~~-g~CI~~~~~CDg~~DC~DgSDE~~C 42 (43)
T 2jm4_A 5 VKCSLGYFPCGNI-TKCLPQLLHCNGVDDCGNQADEDNC 42 (43)
T ss_dssp CSCCTTEEECSSS-SCEEEGGGTTSSCCCSSSCCTTSSC
T ss_pred CCCCCCeeECCCC-CeEcCHhhccCCCCCCCCCcccCCC
Confidence 4588889999985 8999999999999999999999766
No 208
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.08 E-value=1.1e-06 Score=66.50 Aligned_cols=38 Identities=26% Similarity=0.684 Sum_probs=35.0
Q ss_pred CCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 595 C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
|..+||+|+|+|+..+.++|+|.|+.||.|..|+++|.
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~ 39 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 39 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEE
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCccc
Confidence 77788999999998886579999999999999999998
No 209
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.08 E-value=0.0015 Score=78.04 Aligned_cols=327 Identities=8% Similarity=0.023 Sum_probs=167.4
Q ss_pred CCceeEEEcCCCCeEEEEecCCC---CCeEEEecCCCCCcEEEEEecccC----------CCC---------CCceeEEE
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSK---APRIERCSMSGEHRSVIVRVDLLT----------SRG---------AWPNGLTL 501 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~---~~~I~r~~ldG~~~~~i~~~~~~~----------~~~---------~~P~glal 501 (841)
..+..+++.|++.+|+++..... ...|+..++++.....+....... ... .....+++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 45789999999888888875211 137999999876655554311000 000 12467899
Q ss_pred eccCCEEEEEeCCCCeEEEEEcCCC---eeEEEEcCCCCCCcceEEEE--ecCeEEEEeCCCCeEEEEeccCCcceEEEe
Q psy14257 502 DYQLTRIYWIDAKSDSIHTVTYDGK---DHHVVLSNHDSLTHPFAIAL--FENHVYWTDWRTNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 502 D~~~~~LYw~d~~~~~I~~~~~dG~---~~~~i~~~~~~l~~P~gla~--~~~~lY~td~~~~~i~~~~~~~g~~~~~i~ 576 (841)
.+++++|+++.. +.|+..++++. ..+.+... -..+..+++ ++.+|+++.. +.|+.++..+|+...+..
T Consensus 117 SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~---~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 117 SPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHG---EGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp CTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCS---SSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEECCC
T ss_pred CCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccC---CcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEEecc
Confidence 998888988875 89999999887 54443322 123456666 3445666642 467777765554332211
Q ss_pred cccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeec---CCCccc-------ccC---ceeEEeec
Q psy14257 577 RTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMS---DNKTCQ-------VAD---SQFIIFSR 643 (841)
Q Consensus 577 ~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~---d~~tC~-------~~~---~~~l~~~~ 643 (841)
.. ..+. +...+.-...-.. +.-.. ...-|+|-.|.. |+..-. .+. ...+.+..
T Consensus 190 ~~-~~~~-~~g~~~~v~~~~~--~~~~~----------~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 190 DG-STTI-GNGIAEFVADEEM--DRHTG----------YWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp CC-CSSE-EESCCCHHHHHHS--CCCCS----------EEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred CC-ccce-eccccceeeeecc--ccccc----------eEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 10 0000 0000000000000 00000 011122211110 000000 000 00000000
Q ss_pred ------CCeEEEEecCC-CCccccceeec--CCCCCceEEEEecCCCEEEEEEC----CCCeEEEEEcccCceeeeeeee
Q psy14257 644 ------PREIRGVDLEH-PYYHTIPTISI--PQVFSPNNLNFDAANKKIYWTDQ----EYNEVKRSSIVGGQIQLVVDAV 710 (841)
Q Consensus 644 ------~~~i~~~~l~~-~~~~~~~~~~~--~~~~~~~~v~~d~~~~~iyw~d~----~~~~I~~~~~~g~~~~~~~~~~ 710 (841)
...|+.++++. .... .+.. .....+..++| |..+.|+++.. ....|+.+++.+..
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~-------- 323 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQ---WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ-------- 323 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCE---EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC--------
T ss_pred CCCCCCeeEEEEEECCCCCceE---EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc--------
Confidence 01455555544 3211 1111 12234678899 99999998753 23568888776654
Q ss_pred eeeecccccccccccCceEEEEeeCCC----CCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCC
Q psy14257 711 FEFYLTPLSKRSSIVGGQIQLVVDAGI----SHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTS 786 (841)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~ 786 (841)
...++.... ....++++.+.++ ++++.+..+..+|..++++|. .+.+...
T Consensus 324 ------------------~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l~~~------ 377 (741)
T 2ecf_A 324 ------------------QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAALTHG------ 377 (741)
T ss_dssp ------------------EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEESCCS------
T ss_pred ------------------eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeeeeec------
Confidence 222222111 1346889988887 555533334456777777777 4444433
Q ss_pred cCCCceEE-EEeCCCCeEEEEecCCC--cceEEEEecCCCceEEEec
Q psy14257 787 TLSKISSI-AVWPVKGKMFWSNVTKQ--VVTIEMAFMDGTKRETVVS 830 (841)
Q Consensus 787 ~l~~p~~i-avd~~~g~lyw~d~~~~--~~~I~~~~~dG~~~~~l~~ 830 (841)
-.....+ +++|...+||++-.... ..+|.+..++|...+.|..
T Consensus 378 -~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~ 423 (741)
T 2ecf_A 378 -NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK 423 (741)
T ss_dssp -SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC
T ss_pred -ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc
Confidence 2345566 58999888888765432 2468888888876665543
No 210
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.07 E-value=1.4e-06 Score=85.14 Aligned_cols=41 Identities=41% Similarity=0.858 Sum_probs=35.9
Q ss_pred CCCCCCCCCCcccCC-CCeEecCCCCCCCCCCcccCCCCCCC--cc
Q psy14257 27 CQDRKCDESHFTCNE-TLRCIPLAWACDGQPDCGLNDTSDED--HC 69 (841)
Q Consensus 27 C~~~~C~~~~~~C~~-~~~Ci~~~~~Cdg~~dC~~~d~sde~--~C 69 (841)
+....|.+.+|+|.+ ++.|||..|+|||..||. |||||. .|
T Consensus 49 ~~~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~--DgSDE~~~~C 92 (217)
T 2gtl_M 49 LEEHHCDEHESECRGDVPECIHDLLFCDGEKDCR--DGSDEDPETC 92 (217)
T ss_dssp TSCCCCCTTEEECSSSSCCEEEGGGTTSSSCCSS--SSTTTSHHHH
T ss_pred CCCCCCCCCceecCCCCCcEechhhccCCCCCCC--CCCccccCcC
Confidence 445689999999973 699999999999999999 999997 56
No 211
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.06 E-value=1.4e-06 Score=81.36 Aligned_cols=69 Identities=20% Similarity=0.489 Sum_probs=59.1
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----cc---ccccCCCCCCCcccCCC-CcEEecCCCceecCCCCccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DE---KQCLRSDCHHDCYNTPE-GFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~e---C~~~~~~C~~~C~~~~g-~~~C~C~~Gy~l~~d~~~C~ 170 (841)
+|.++ +.|++. ++.| .|+.||.+..| ++ |...++.|.+.|.++.+ +|+|.|++||.+..+++.|.
T Consensus 54 pC~n~-g~C~~~~g~y~C----~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 54 PCQNG-GSCKDQLQSYIC----FCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp CCCTT-CEEEEETTEEEE----ECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSCEE
T ss_pred CcCCC-CEEeCCCCCEEe----eCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCCCC
Confidence 58776 889876 7889 99999987778 23 55567789999999999 99999999999999999999
Q ss_pred cccc
Q psy14257 171 YLHP 174 (841)
Q Consensus 171 ~~~e 174 (841)
++++
T Consensus 129 ~~~e 132 (142)
T 2c4f_L 129 PTVE 132 (142)
T ss_dssp ESSS
T ss_pred CCCc
Confidence 8876
No 212
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.06 E-value=3.4e-06 Score=72.01 Aligned_cols=77 Identities=16% Similarity=0.468 Sum_probs=59.1
Q ss_pred CCCCCCCCCCCCCCCCccc--ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccc--cccccCCCCCccC--cee
Q psy14257 113 ALVCDGEPACFNGEDEMFC--DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS--YLHPCEAWGTCSQ--DCE 186 (841)
Q Consensus 113 ~~~Cdg~~~C~~g~de~~C--~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~--~~~eC~~~~~Cs~--~C~ 186 (841)
+|.| .|.+|+.+..| ++|... .|.+..++|+|.|++||. .|+ ++++|.. .+|.+ .|.
T Consensus 1 sy~C----~C~~g~~g~~c~~~~c~~~------pC~n~~~~y~C~C~~G~~------~C~~~~~~~C~~-~pC~ngg~C~ 63 (91)
T 1tpg_A 1 SYQV----ICRDEKTQMIYQQHQSWLR------PVLRSNRVEYCWCNSGRA------QCHSVPVKSCSE-PRCFNGGTCQ 63 (91)
T ss_dssp CCCC----CCBCSSSCCBCCSSCEEEE------ECSSSSCEEEEECSSSCC------BCCEECEEECSS-CCSCTTCEEE
T ss_pred Ceee----ECCCCCcCCeECCCcccCC------ccccCCCCcEeECCCCCc------ccccCcCCcccC-CCCCCCCEee
Confidence 4667 89999987667 455422 478889999999999995 685 6888953 56754 788
Q ss_pred ecCCC--CceEEeecCCeeecCCCCceE
Q psy14257 187 PSVSN--NSYKCTCHAGYELEPDMFTCK 212 (841)
Q Consensus 187 ~~~~~--g~~~C~C~~G~~l~~d~~~C~ 212 (841)
+. . ++|+|.|++||. +..|.
T Consensus 64 ~~--~~~~~~~C~C~~G~~----G~~Ce 85 (91)
T 1tpg_A 64 QA--LYFSDFVCQCPEGFA----GKSCE 85 (91)
T ss_dssp EE--SSSSCEEEECCTTCB----SSSCC
T ss_pred cC--CCCCCeEeECCCCCc----CCcCC
Confidence 87 6 899999999996 45664
No 213
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.05 E-value=1.6e-06 Score=63.61 Aligned_cols=38 Identities=39% Similarity=1.029 Sum_probs=33.2
Q ss_pred CCCCCCCcccCC----CCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQD----VLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~----~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+ . +.||+.+++|||..||.+|+||..|
T Consensus 5 ~~C~~~~F~C~~~~~~~-g~CIp~~~~CDG~~DC~DgSDE~~C 46 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAH-GECYPQDWLCDGHPDCDDGRDEWGC 46 (47)
T ss_dssp -CCSTTEECCSSCTTSC-CCCEEGGGSSCSSCCSSSSTTTGGG
T ss_pred CCCCCCceEcCCCCCCC-CcCCCccccCCCcCCCCCCcccCCC
Confidence 357888999983 3 8999999999999999999999876
No 214
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.05 E-value=1.2e-06 Score=81.05 Aligned_cols=69 Identities=23% Similarity=0.539 Sum_probs=37.5
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc-----ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCcccccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC-----DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLH 173 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C-----~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~ 173 (841)
+|.++ +.|++. ++.| .|+.||.+..| ++|...++.|.+.|.++.++|+|.|++||.+..+++.|.+++
T Consensus 49 pC~n~-g~C~~~~~~y~C----~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 49 PCQNQ-GKCKDGLGEYTC----TCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp -------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCc-CCcccCCCCEEe----eCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 47766 788765 7889 99999987778 458766678999999999999999999999999999998765
Q ss_pred c
Q psy14257 174 P 174 (841)
Q Consensus 174 e 174 (841)
+
T Consensus 124 ~ 124 (134)
T 2vh0_B 124 P 124 (134)
T ss_dssp S
T ss_pred C
Confidence 3
No 215
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.05 E-value=2e-06 Score=77.51 Aligned_cols=75 Identities=29% Similarity=0.746 Sum_probs=57.3
Q ss_pred ccccccCCCCCCCcccC-CCCcEEecCCCceecCC-CCccccccccCCCCCccCceeecCCCCceEEeecCCeeecCCCC
Q psy14257 132 DEKQCLRSDCHHDCYNT-PEGFMCVCPRDMYLQPD-LITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMF 209 (841)
Q Consensus 132 ~eC~~~~~~C~~~C~~~-~g~~~C~C~~Gy~l~~d-~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~ 209 (841)
+||. +.+|.+.|.++ .++|+|.|++||.+... ...|.+ +| ..+.|.+.|.+ .++|+|.|++||.+.. +.
T Consensus 5 deC~--~~pC~~~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~--~C-~~~~C~~~C~~---~~~y~C~C~~Gy~~~~-g~ 75 (118)
T 1dx5_I 5 DPCF--RANCEYQCQPLDQTSYLCVCAEGFAPIPHEPHRCQM--FC-NQTACPADCDP---NTQASCECPEGYILDD-GF 75 (118)
T ss_dssp CGGG--GCCCSSEEEECSSSCEEEECCTTEEEETTEEEEEEE--CC-CSSEEECEECT---TSTTCEECCTTEEEET-TT
T ss_pred ccCC--CCCCCCCCCCCCCCCEEeECCCCccccCCCCCcccc--cc-CCCCCCCcccC---CCCeEeECCCCccCCC-CC
Confidence 4664 45898899999 99999999999997532 223443 34 35678788877 4789999999999875 78
Q ss_pred ceEeCC
Q psy14257 210 TCKSKS 215 (841)
Q Consensus 210 ~C~~~~ 215 (841)
.|.+++
T Consensus 76 ~C~did 81 (118)
T 1dx5_I 76 ICTDID 81 (118)
T ss_dssp EEEECC
T ss_pred cccccc
Confidence 898763
No 216
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.04 E-value=1.7e-06 Score=62.49 Aligned_cols=37 Identities=35% Similarity=0.934 Sum_probs=32.7
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+ +.||+.+++|||..+|.+|+||..|
T Consensus 6 ~~C~~~~f~C~~--g~CI~~~~~CDg~~DC~DgSDE~~C 42 (44)
T 3a7q_B 6 KECEKDQFQCRN--ERCIPSVWRCDEDDDCLDHSDEDDC 42 (44)
T ss_dssp --CCTTEEECTT--SCEEEGGGTTSSSCCSSSSTTTSCC
T ss_pred CCCCCCceEcCC--CCEeChhhccCCCCCCCCCccccCC
Confidence 457888999998 8999999999999999999999766
No 217
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.03 E-value=4.6e-06 Score=89.40 Aligned_cols=70 Identities=24% Similarity=0.587 Sum_probs=60.0
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----cccccc-CCCCCCCcccCCCCcEEecCCCceecCCCCcccccc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DEKQCL-RSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLH 173 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~eC~~~-~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~ 173 (841)
+|.++ +.|++. ++.| .|+.||.+..| +||... +.+|.+.|.|+.++|.|.|++||.+..+++.|.+.+
T Consensus 12 pC~~~-g~C~~~~~~~~C----~C~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~~ 86 (317)
T 3h5c_B 12 PCLHN-GSCQDSIWGYTC----TCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHD 86 (317)
T ss_dssp CCTTT-CCCCCCSSSCCC----CCSSSCCSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEECS
T ss_pred CCCCC-CEeECCCCCeEE----ECCCCCcCCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccccc
Confidence 47666 777765 7889 99999998888 689752 368999999999999999999999988999999998
Q ss_pred cc
Q psy14257 174 PC 175 (841)
Q Consensus 174 eC 175 (841)
+|
T Consensus 87 ~c 88 (317)
T 3h5c_B 87 QC 88 (317)
T ss_dssp SC
T ss_pred cc
Confidence 87
No 218
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.01 E-value=0.00045 Score=71.37 Aligned_cols=256 Identities=12% Similarity=0.039 Sum_probs=144.8
Q ss_pred ccccccccccccEEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecC-CcccceEEEEeCC-CCCccceEEee
Q psy14257 229 HELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIG-NSLSNIDVVVQTG-LSTAEGLAVDW 306 (841)
Q Consensus 229 ~~I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~-~~~~~~~~~~~~~-l~~p~giavD~ 306 (841)
..|+..++.......+......+.++.|...... |++.. .+.|+..++.+ +. ...+.... ...+..+++.+
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~--l~~~~--~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKY--LLLNS--EGLLYRLSLAGDPS---PEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEEETTTTEEEEEEEESSCCEEEEECTTSSE--EEEEE--TTEEEEEESSSCCS---CEECCCTTCCCBCSCCEECT
T ss_pred eeEEEEeCCCCceeeeccCCcceEeeEECCCCCE--EEEEc--CCeEEEEeCCCCCC---ceEeccccccccccceEECC
Confidence 3445555555555554444445667788776433 66653 67898888876 54 22222111 23456688877
Q ss_pred ecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCC--eEEEEEecCCccE
Q psy14257 307 IGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN--TVESVRVDGSERT 384 (841)
Q Consensus 307 ~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~--~I~~~~ldG~~~~ 384 (841)
.++ +++++... .....+|+..+.++...+.+... .....+++.++++.|+++....+ .|+.+++++...+
T Consensus 95 dg~--~l~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 95 DGA--LYAISDKV----EFGKSAIYLLPSTGGTPRLMTKN--LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp TSS--EEEEEECT----TTSSCEEEEEETTCCCCEECCSS--SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred CCC--EEEEEEeC----CCCcceEEEEECCCCceEEeecC--CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence 553 33333321 11245888888877655544332 23677889999999987765555 5566666665544
Q ss_pred EEEeeeeecCCCccccCCCCCCccccccceEEEEec--CCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEe
Q psy14257 385 VSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVES--NLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTD 462 (841)
Q Consensus 385 ~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~--~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td 462 (841)
.+.... ..+ ...+++..+..|+++.. ...+|+.+++++.....+.. .......++++|...+|+++.
T Consensus 167 ~~~~~~-----~~~-----~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~ 235 (297)
T 2ojh_A 167 RLTHGE-----GRN-----DGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVFVS 235 (297)
T ss_dssp ECCCSS-----SCE-----EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEEEE
T ss_pred EcccCC-----Ccc-----ccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEEEE
Confidence 332110 000 00112223355777653 34456666666665554432 224566789999888887776
Q ss_pred cCC--------CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC
Q psy14257 463 WDS--------KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA 513 (841)
Q Consensus 463 ~~~--------~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~ 513 (841)
... ....|+..++++.....+.... ..-.....+++.+.+.+|+++..
T Consensus 236 ~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 236 YDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF---GGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EETTCCSCCSSEEEEEEEEETTSCSCEEEEEEE---ESTTTSCSCCBCTTSSEEEEEEE
T ss_pred cCCCCCcccccCceEEEEEecCCCCceeeeccC---CCCcccccceECCCCCEEEEEEe
Confidence 431 1256999999877665554310 11234566778877777877654
No 219
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.01 E-value=0.01 Score=70.40 Aligned_cols=284 Identities=11% Similarity=0.055 Sum_probs=153.1
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC-----CCcEEEEEec
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG-----EHRSVIVRVD 487 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG-----~~~~~i~~~~ 487 (841)
+.|.++. .+.|.+.++++.....+.. .-..+..++++|++.+|+++. ...|+..++++ .....+....
T Consensus 93 ~~~~~~~--~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~SpdG~~la~~~----~~~i~v~~~~~~~~~~g~~~~~~~~~ 165 (706)
T 2z3z_A 93 GLVVLFT--QGGLVGFDMLARKVTYLFD-TNEETASLDFSPVGDRVAYVR----NHNLYIARGGKLGEGMSRAIAVTIDG 165 (706)
T ss_dssp TEEEEEE--TTEEEEEETTTTEEEEEEC-CTTCCTTCEECTTSSEEEEEE----TTEEEEEECBCTTSCCCCCEESCSCC
T ss_pred CeEEEEE--CCEEEEEECCCCceEEccC-CcccccCCcCCCCCCEEEEEE----CCeEEEEecCcccccCCCcEEeccCC
Confidence 5555553 3789999998766555443 234577889999988888864 46888888876 4443332210
Q ss_pred cc---------CCCCCCceeEEEeccCCEEEEEeC--------------------------------CCCeEEEEEcCCC
Q psy14257 488 LL---------TSRGAWPNGLTLDYQLTRIYWIDA--------------------------------KSDSIHTVTYDGK 526 (841)
Q Consensus 488 ~~---------~~~~~~P~glalD~~~~~LYw~d~--------------------------------~~~~I~~~~~dG~ 526 (841)
.. ...+..+.++++.+++++|+++.. ....|..+++++.
T Consensus 166 ~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~ 245 (706)
T 2z3z_A 166 TETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG 245 (706)
T ss_dssp BTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT
T ss_pred CCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC
Confidence 00 001123588999998888888751 2357888888877
Q ss_pred eeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCC----CeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCC
Q psy14257 527 DHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRT----NSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNG 600 (841)
Q Consensus 527 ~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~----~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng 600 (841)
....+......-..+..+++. +.+|+++.... ..|+.++..+|+....+..... +...++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~--------~~~~~~------ 311 (706)
T 2z3z_A 246 KTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD--------KHYVEP------ 311 (706)
T ss_dssp EEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC--------SSCCCC------
T ss_pred ceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC--------CCeECc------
Confidence 654443221111234566663 34577754322 3677777766633333221100 000000
Q ss_pred CCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecC---CeEEEEecCCCCccccceeecCCCCCceE-EEE
Q psy14257 601 NCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRP---REIRGVDLEHPYYHTIPTISIPQVFSPNN-LNF 676 (841)
Q Consensus 601 ~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~---~~i~~~~l~~~~~~~~~~~~~~~~~~~~~-v~~ 676 (841)
.. .....+. .+..+|+.+.. ..|+.++++.... ..+.. ....+.. ++|
T Consensus 312 -~~-----------------~~~~sp~------~dg~~l~~~~~~g~~~l~~~~~~~~~~---~~l~~-~~~~v~~~~~~ 363 (706)
T 2z3z_A 312 -LH-----------------PLTFLPG------SNNQFIWQSRRDGWNHLYLYDTTGRLI---RQVTK-GEWEVTNFAGF 363 (706)
T ss_dssp -CS-----------------CCEECTT------CSSEEEEEECTTSSCEEEEEETTSCEE---EECCC-SSSCEEEEEEE
T ss_pred -cC-----------------CceeecC------CCCEEEEEEccCCccEEEEEECCCCEE---EecCC-CCeEEEeeeEE
Confidence 00 0011110 01123333322 1344444332211 11111 1122334 789
Q ss_pred ecCCCEEEEEECCCC----eEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcE
Q psy14257 677 DAANKKIYWTDQEYN----EVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNM 752 (841)
Q Consensus 677 d~~~~~iyw~d~~~~----~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~L 752 (841)
++..+.||++....+ .|+++++++.. .+.+. ....+..+++.+.++.|
T Consensus 364 spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--------------------------~~~l~--~~~~~~~~~~spdg~~l 415 (706)
T 2z3z_A 364 DPKGTRLYFESTEASPLERHFYCIDIKGGK--------------------------TKDLT--PESGMHRTQLSPDGSAI 415 (706)
T ss_dssp CTTSSEEEEEESSSCTTCBEEEEEETTCCC--------------------------CEESC--CSSSEEEEEECTTSSEE
T ss_pred cCCCCEEEEEecCCCCceEEEEEEEcCCCC--------------------------ceecc--CCCceEEEEECCCCCEE
Confidence 999999999986654 78888887654 12221 23346678888888877
Q ss_pred EEEecCC-CCCeEEEEecCCcc
Q psy14257 753 FIAVSSP-TQSKIVVCNLEGEY 773 (841)
Q Consensus 753 Yw~~~~~-~~~~I~v~~l~g~~ 773 (841)
..+.++. ....|.+.++++..
T Consensus 416 ~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 416 IDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EEEEECSSCSCEEEEEESSSCE
T ss_pred EEEecCCCCCcEEEEEECCCCe
Confidence 7663222 23569999887765
No 220
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.99 E-value=0.066 Score=64.26 Aligned_cols=147 Identities=9% Similarity=0.011 Sum_probs=84.7
Q ss_pred cCCCcEEEEccCCc-eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCcee
Q psy14257 420 SNLDQIEVAKLSGQ-FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNG 498 (841)
Q Consensus 420 ~~~~~I~v~~~~G~-~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~g 498 (841)
...+.|.+.+++.. .....+...-.....++++|.++.++++-.. .+.|...++........... ........
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~--dg~v~vwd~~~~~~~~~~~~----~~~~~v~~ 189 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL--DRTVKVWSLGQSTPNFTLTT----GQERGVNY 189 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEETTCSSCSEEEEC----CCTTCCCE
T ss_pred cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcceeEEec----CCCCCEEE
Confidence 34466777776643 3333333344567899999855655555444 56788888764433333321 22255677
Q ss_pred EEEec--cCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 499 LTLDY--QLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 499 lalD~--~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
+++.+ .+..|+ +-...+.|...++........+..+ ......+++. ++.++++-...+.|...+..+++....+
T Consensus 190 ~~~~~~~~~~~l~-~~~~dg~i~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 190 VDYYPLPDKPYMI-TASDDLTIKIWDYQTKSCVATLEGH--MSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EEECCSTTCCEEE-EECTTSEEEEEETTTTEEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEEECCCCCEEE-EEeCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 88876 444444 5455678999988765443333322 2334566664 3455555555677777776666544443
No 221
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.98 E-value=1.1e-05 Score=92.74 Aligned_cols=81 Identities=21% Similarity=0.592 Sum_probs=63.6
Q ss_pred ccccccCCCCCC--CcccCCCC-cEE-ecCCCceecCCCCccccccccC-CCCCccC-----ceeecCCCCceEEe-ecC
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEG-FMC-VCPRDMYLQPDLITCSYLHPCE-AWGTCSQ-----DCEPSVSNNSYKCT-CHA 200 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~-~~C-~C~~Gy~l~~d~~~C~~~~eC~-~~~~Cs~-----~C~~~~~~g~~~C~-C~~ 200 (841)
+||. ..+|.+ .|.++.++ |+| .|++||. .+++.|++++||. .++.|.+ .|.++ .++|+|. |++
T Consensus 4 DeC~--~nPC~~gg~C~n~~~Gsy~C~~C~~Gyt--Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt--~gsY~C~~C~~ 77 (634)
T 1yo8_A 4 DGCL--SNPCFPGAQCSSFPDGSWSCGFCPVGFL--GNGTHCEDLDECALVPDICFSTSKVPRCVNT--QPGFHCLPCPP 77 (634)
T ss_dssp CGGG--GCCSCTTCCEEECTTSCEEECCCCTTBC--SCSSSCCBCCTTTTSCCCSCCCSSSCCEEEC--SSSEEECCCCT
T ss_pred cccC--CCCCCCCCEEecCCCCCeECCcCCCccC--CCCCCccccccccCCCCcccCCccccceeec--cCceecccCCC
Confidence 4665 347864 89999865 999 9999997 4678999999996 3456965 79999 9999998 999
Q ss_pred CeeecC-----------CCCceEeCCCCC
Q psy14257 201 GYELEP-----------DMFTCKSKSKND 218 (841)
Q Consensus 201 G~~l~~-----------d~~~C~~~~~~~ 218 (841)
||.... +++.|..+++..
T Consensus 78 Gy~G~~c~g~g~~~~~~dg~~C~dideC~ 106 (634)
T 1yo8_A 78 RYRGNQPVGVGLEAAKTEKQVCEPENPCK 106 (634)
T ss_dssp TEEECCCEESSSHHHHSCCCCEEECCTTT
T ss_pred CcccCccccccccccccCCCccccccccc
Confidence 998653 456688775443
No 222
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=97.97 E-value=2.4e-06 Score=80.00 Aligned_cols=71 Identities=23% Similarity=0.527 Sum_probs=57.8
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCc------------cc---ccccccCCCCC--CCcccCCCCcEEecCCCce
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEM------------FC---DEKQCLRSDCH--HDCYNTPEGFMCVCPRDMY 161 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~------------~C---~eC~~~~~~C~--~~C~~~~g~~~C~C~~Gy~ 161 (841)
.|.+. +.|++. ++.| .|..||... .| +||...+..|. +.|+|++++|+|.|++||.
T Consensus 54 ~C~~~-~~C~n~~g~y~C----~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~ 128 (143)
T 2bou_A 54 SCGKF-SDCWNTEGSYDC----VCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWK 128 (143)
T ss_dssp CCCTT-EEEEECSSCEEE----EECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSC
T ss_pred CCCCC-CEEEcCCCCeEe----ECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcc
Confidence 57665 788775 7889 899998532 47 68875556886 5899999999999999999
Q ss_pred ecCCCCccccccccC
Q psy14257 162 LQPDLITCSYLHPCE 176 (841)
Q Consensus 162 l~~d~~~C~~~~eC~ 176 (841)
+..+++.|...++|+
T Consensus 129 g~~~~~~C~~~~~C~ 143 (143)
T 2bou_A 129 PRHGIPNNQKDTVCE 143 (143)
T ss_dssp BCTTCCSSBTTCCBC
T ss_pred cCCCCccCccCCccC
Confidence 999999999888873
No 223
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.95 E-value=1.2e-06 Score=84.68 Aligned_cols=44 Identities=30% Similarity=0.632 Sum_probs=36.1
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCC-CCCCCCc--ccCCCCeEe
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDR-KCDESHF--TCNETLRCI 46 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~-~C~~~~~--~C~~~~~Ci 46 (841)
+|||..|+|||..||.|||||.+++|... +|.+++| +|. .+.|+
T Consensus 66 ~CIp~~wvCDG~~DC~DGSDE~~~~C~~~~tc~~~qF~g~~~-~d~C~ 112 (220)
T 2gtl_N 66 ECISDLLVCDGHKDCHNAHDEDPDVCDTSVVKAGNVFSGTST-WHGCL 112 (220)
T ss_dssp CEEETTTTTSSSCCSTTCTTSCGGGGCGGGGCTTCEEEEEEE-ECSSC
T ss_pred cEeCcceecCCCCCCCCCCccCcccCCCCCccCCcceeeEec-CChhh
Confidence 69999999999999999999976789877 8887766 465 44454
No 224
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=97.93 E-value=2.7e-06 Score=62.49 Aligned_cols=38 Identities=39% Similarity=1.031 Sum_probs=33.6
Q ss_pred CCCCCCCcccCC----CCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQD----VLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~----~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+ . +.||+.+++|||..||.+|+||..|
T Consensus 3 ~~C~~~~F~C~~~~~~~-~~CIp~~~~CDG~~DC~DgSDE~~C 44 (47)
T 1jrf_A 3 SRCPPGQFRCSEPPGAH-GECYPQDWLCDGHPDCDDGRDEWGC 44 (47)
T ss_dssp CCCCCCCSCSSSCSCCC-TTTSGGGGSSSSSCCSSSSCTTHHH
T ss_pred CCCCCCeeECCCCCCCC-CeEcCHhhcCCCCcCCCCCcccccC
Confidence 358888999984 3 8999999999999999999999866
No 225
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.92 E-value=4.3e-06 Score=80.77 Aligned_cols=38 Identities=34% Similarity=0.872 Sum_probs=33.1
Q ss_pred CCCCCCCCCcccC-CCCeEecCCCCCCCCCCcccCCCCCCC
Q psy14257 28 QDRKCDESHFTCN-ETLRCIPLAWACDGQPDCGLNDTSDED 67 (841)
Q Consensus 28 ~~~~C~~~~~~C~-~~~~Ci~~~~~Cdg~~dC~~~d~sde~ 67 (841)
+...|.+.+|+|. ++++|||..|+|||..||. |||||.
T Consensus 49 ~~~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~--DGSDE~ 87 (220)
T 2gtl_N 49 EGTHCEKRTFQCGGNEQECISDLLVCDGHKDCH--NAHDED 87 (220)
T ss_dssp HCCSSCTTEEECCSSSCCEEETTTTTSSSCCST--TCTTSC
T ss_pred CCCCCCCCccCcCCCCCcEeCcceecCCCCCCC--CCCccC
Confidence 3467889999995 4689999999999999999 888884
No 226
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.90 E-value=2.8e-06 Score=74.92 Aligned_cols=59 Identities=29% Similarity=0.613 Sum_probs=15.5
Q ss_pred CeEecC--CCCCCCCCCCCCCCCC---ccc---ccccccCCCCCCCcccCCCCcEEecCCCceecCCCCccc
Q psy14257 107 RTCIPK--ALVCDGEPACFNGEDE---MFC---DEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 107 ~~Ci~~--~~~Cdg~~~C~~g~de---~~C---~eC~~~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
..|++. ++.| .|+.||.. ..| +||.. +..|.+.|.|++++|.|.|++||.+.+++++|+
T Consensus 41 ~~C~n~~g~y~C----~C~~Gy~g~~g~~C~dideC~~-~~~C~~~C~n~~gsy~C~C~~Gy~~~~d~~~C~ 107 (107)
T 2w2n_E 41 YVCNDLKIGYEC----LCPDGFQLVAQRRCEDIDECQD-PDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 107 (107)
T ss_dssp SEEECCSBSCEE----ECCTTCEEETTTEEEC----------------------------------------
T ss_pred CEeEeCCCCeEE----ECCCCccccCCCccccccccCC-CCCcCCeeecCCCCEEEECCCCceECCCCCccC
Confidence 356553 7889 89999965 568 78973 468999999999999999999999988888874
No 227
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.90 E-value=0.0018 Score=70.43 Aligned_cols=82 Identities=6% Similarity=0.057 Sum_probs=54.3
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
+..+++.|++.+|+++........|+..++++.....+.. .......++++.+++++|+++... +.|+.+++++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~-----~~~~~~~~~~~spdg~~l~~~~~~-~~l~~~d~~~ 111 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTE-----GKGDNTFGGFISTDERAFFYVKNE-LNLMKVDLET 111 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCC-----SSCBCTTTCEECTTSSEEEEEETT-TEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeec-----CCCCccccceECCCCCEEEEEEcC-CcEEEEECCC
Confidence 5677899988887766533235689999988765444422 111112236778888889877653 4799999988
Q ss_pred CeeEEEEc
Q psy14257 526 KDHHVVLS 533 (841)
Q Consensus 526 ~~~~~i~~ 533 (841)
...+.+..
T Consensus 112 ~~~~~~~~ 119 (396)
T 3c5m_A 112 LEEQVIYT 119 (396)
T ss_dssp CCEEEEEE
T ss_pred CCcEEEEe
Confidence 76666654
No 228
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.90 E-value=0.14 Score=65.00 Aligned_cols=423 Identities=6% Similarity=-0.050 Sum_probs=222.1
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.++.|.... . +..+-...+.|...++..+. ....+...-.....+++.+.+ -|++-. ..++
T Consensus 616 ~~v~~~~~s~~~-~--~l~s~~~d~~i~vw~~~~~~---~~~~~~~h~~~v~~~~~s~~~--~~l~s~--------~~d~ 679 (1249)
T 3sfz_A 616 DAVYHACFSQDG-Q--RIASCGADKTLQVFKAETGE---KLLDIKAHEDEVLCCAFSSDD--SYIATC--------SADK 679 (1249)
T ss_dssp SCEEEEEECTTS-S--EEEEEETTSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTS--SEEEEE--------ETTS
T ss_pred ccEEEEEECCCC-C--EEEEEeCCCeEEEEECCCCC---EEEEeccCCCCEEEEEEecCC--CEEEEE--------eCCC
Confidence 446677887653 3 44454567788888776553 222233333455667777644 233221 2356
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEcc-CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~-~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
.|..+++............-.....+++.+. ++.++.+-...+.|...+++.......+.. ....+ .+
T Consensus 680 ~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~----h~~~v-------~~ 748 (1249)
T 3sfz_A 680 KVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFG----HTNSV-------NH 748 (1249)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECC----CSSCE-------EE
T ss_pred eEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecC----CCCCE-------EE
Confidence 7888887543322222333444566777765 334445555677888888765543322210 00000 01
Q ss_pred cccc-cceEEEEecCCCcEEEEccCCce-EEEEecCC------------CCCceeEEEcCCCCeEEEEecCCCCCeEEEe
Q psy14257 408 NLWI-GKNLYWVESNLDQIEVAKLSGQF-RRTLIAGD------------MESPRAIALDPRFGLLFWTDWDSKAPRIERC 473 (841)
Q Consensus 408 vdw~-~~~LY~tD~~~~~I~v~~~~G~~-~~~l~~~~------------l~~P~giavd~~~g~Ly~td~~~~~~~I~r~ 473 (841)
+.|. .+.+.++-...+.|.+.++.... ...+.... ......+++.|.+..+..+. .+.|...
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~----~~~v~~~ 824 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA----KNKVLLF 824 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE----TTEEEEE
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc----CCcEEEE
Confidence 1111 14455566667888888876443 33322111 12456788998877777665 3577777
Q ss_pred cCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEE
Q psy14257 474 SMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVY 552 (841)
Q Consensus 474 ~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY 552 (841)
++........... ........+++.+.+..++.+ ...+.|...+++..........+ .....++++. ++..+
T Consensus 825 d~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~h--~~~v~~v~~spdg~~l 897 (1249)
T 3sfz_A 825 DIHTSGLLAEIHT----GHHSTIQYCDFSPYDHLAVIA-LSQYCVELWNIDSRLKVADCRGH--LSWVHGVMFSPDGSSF 897 (1249)
T ss_dssp ETTTCCEEEEEEC----SSSSCCCEEEECSSTTEEEEE-CSSSCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEE
T ss_pred EecCCCceeEEcC----CCCCceEEEEEcCCCCEEEEE-eCCCeEEEEEcCCCceeeecCCC--ccceEEEEECCCCCEE
Confidence 7765443333321 334566789998766665554 44678999988876554444332 2345677774 34444
Q ss_pred EEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 553 WTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 553 ~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
++-...+.|...+..++.....+. . ....... ..
T Consensus 898 ~s~s~dg~v~vw~~~~~~~~~~~~--------~-------------------------~~~~~~~------~~------- 931 (1249)
T 3sfz_A 898 LTASDDQTIRVWETKKVCKNSAIV--------L-------------------------KQEIDVV------FQ------- 931 (1249)
T ss_dssp EEEETTSCEEEEEHHHHHSCCSSS--------E-------------------------EEEEEEE------EE-------
T ss_pred EEEeCCCeEEEEEccccceeeeec--------c-------------------------cceeeEE------Ec-------
Confidence 554445555555432111000000 0 0000000 00
Q ss_pred ccCceeEE-eecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeee
Q psy14257 633 VADSQFII-FSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVF 711 (841)
Q Consensus 633 ~~~~~~l~-~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~ 711 (841)
.....++ ......+......... ... . ....+.++++.|..+.+.... ..+.|+..++....
T Consensus 932 -~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~-~~~~i~~~~~sp~g~~l~~g~-~~g~i~i~d~~~~~--------- 994 (1249)
T 3sfz_A 932 -ENETMVLAVDNIRGLQLIAGKTGQ---IDY--L-PEAQVSCCCLSPHLEYVAFGD-EDGAIKIIELPNNR--------- 994 (1249)
T ss_dssp -TTEEEEEEEESSSSEEEEEESSCC---EEE--E-CCSCEEEEEECTTSSEEEEEE-TTSCCEEEETTTTS---------
T ss_pred -CCCcEEEEecCCcceEEEecCcce---EEE--c-ccCcEEEEEEcCCCCEEEEEc-CCCCEEEEEcCCCc---------
Confidence 0001111 1111111111111110 000 0 113467889999888888777 57888888876544
Q ss_pred eeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCc
Q psy14257 712 EFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKI 791 (841)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p 791 (841)
....+......+.+|++.+.++.|..+ ...++|.+.++.......+... -...
T Consensus 995 -----------------~~~~~~~h~~~v~~l~~s~dg~~l~s~---~~dg~i~vwd~~~~~~~~~~~~-------~~~v 1047 (1249)
T 3sfz_A 995 -----------------VFSSGVGHKKAVRHIQFTADGKTLISS---SEDSVIQVWNWQTGDYVFLQAH-------QETV 1047 (1249)
T ss_dssp -----------------CEEECCCCSSCCCCEEECSSSSCEEEE---CSSSBEEEEETTTTEEECCBCC-------SSCE
T ss_pred -----------------eeeecccCCCceEEEEECCCCCEEEEE---cCCCEEEEEECCCCceEEEecC-------CCcE
Confidence 222233455678899999988877776 3568899999876544332222 3566
Q ss_pred eEEEEeCC
Q psy14257 792 SSIAVWPV 799 (841)
Q Consensus 792 ~~iavd~~ 799 (841)
..+++.|.
T Consensus 1048 ~~~~~~~~ 1055 (1249)
T 3sfz_A 1048 KDFRLLQD 1055 (1249)
T ss_dssp EEEEECSS
T ss_pred EEEEEcCC
Confidence 77777774
No 229
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=97.90 E-value=3.4e-06 Score=60.85 Aligned_cols=37 Identities=32% Similarity=0.832 Sum_probs=33.4
Q ss_pred CCCCCCCcccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 93 ~~C~~~~~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
..|.+.+|.|.+ +.||+..++|||..+|.+|+||..|
T Consensus 3 ~~C~~~~F~C~~--g~CI~~~~~CDg~~DC~DgSDE~~~ 39 (44)
T 1j8e_A 3 HSCSSTQFKCNS--GRCIPEHWTCDGDNDCGDYSDETHA 39 (44)
T ss_dssp SSSCTTEEECTT--SCEEEGGGTTSSSCCSSSSGGGSHH
T ss_pred CCCCCCceEeCC--CCeEecCcccCCCCCCCCCCCCCCc
Confidence 358888999998 8999999999999999999999764
No 230
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.89 E-value=9.2e-06 Score=67.90 Aligned_cols=61 Identities=31% Similarity=0.649 Sum_probs=48.2
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCC--Cccc---ccccccCCCCC-CCcccCCCCcEEecCCCceecCCCCcc
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGED--EMFC---DEKQCLRSDCH-HDCYNTPEGFMCVCPRDMYLQPDLITC 169 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~d--e~~C---~eC~~~~~~C~-~~C~~~~g~~~C~C~~Gy~l~~d~~~C 169 (841)
.|.+ +.|++. ++.| .|+.||. +..| +||.. ..+|. +.|.|++++|+|.|++||.+.++ ++|
T Consensus 13 ~C~~--g~C~n~~g~y~C----~C~~Gy~~~g~~C~dideC~~-~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 13 VCKH--GQCINTDGSYRC----ECPFGYILAGNECVDTDECSV-GNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp SCSS--SEECCCSSCCCE----ECCTTEEEETTEEEECCGGGT-CCTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred CcCC--CEEEecCCCEEE----ECCCCeECCCCccCCcccccC-CCCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence 4654 667664 7899 8999994 6678 78874 34786 58999999999999999998766 666
No 231
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.89 E-value=0.019 Score=60.34 Aligned_cols=146 Identities=8% Similarity=-0.020 Sum_probs=91.2
Q ss_pred eEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCC
Q psy14257 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRG 493 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~ 493 (841)
+++++-...+.|.+.++........+......+..++++|...+|+.... .+.|...++.......... .-
T Consensus 154 ~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~~~d~~~~~~~~~~~------~~ 224 (337)
T 1gxr_A 154 KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL---DNTVRSWDLREGRQLQQHD------FT 224 (337)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEE------CS
T ss_pred CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec---CCcEEEEECCCCceEeeec------CC
Confidence 33344444567777777654443334434466889999998666666553 4788888886544333332 23
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
..+..+++.+.+..|+.+. ..+.|..+++.......+... ......+++. ++.++++-...+.|...+..+++..
T Consensus 225 ~~v~~~~~s~~~~~l~~~~-~~~~i~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGM-ESSNVEVLHVNKPDKYQLHLH---ESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTSCEEEEETTSSCEEEECCC---SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEc-CCCcEEEEECCCCCeEEEcCC---ccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 4567899987777776665 467899999987766544322 2345677774 3555555555677777776655543
No 232
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.88 E-value=0.042 Score=58.39 Aligned_cols=286 Identities=7% Similarity=-0.074 Sum_probs=153.4
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.++.|.... . +.++-..++.|...++..+. ....+...-.....+++.+.+ -+++-. ..++
T Consensus 33 ~~v~~~~~s~~~-~--~l~~~~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~--~~l~s~--------~~dg 96 (369)
T 3zwl_B 33 RPLTQVKYNKEG-D--LLFSCSKDSSASVWYSLNGE---RLGTLDGHTGTIWSIDVDCFT--KYCVTG--------SADY 96 (369)
T ss_dssp SCEEEEEECTTS-C--EEEEEESSSCEEEEETTTCC---EEEEECCCSSCEEEEEECTTS--SEEEEE--------ETTT
T ss_pred ceEEEEEEcCCC-C--EEEEEeCCCEEEEEeCCCch---hhhhhhhcCCcEEEEEEcCCC--CEEEEE--------eCCC
Confidence 345667776642 3 44444556777777766543 222233223345566666533 233221 2356
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCC----CCeEEEEEecCCccEE-EEeee------eecCCCc
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----LNTVESVRVDGSERTV-SFNLE------VLGSDSR 397 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~----~~~I~~~~ldG~~~~~-~~~~~------~~~~~~~ 397 (841)
.|..+++.......... .-.....+++.+.+..|+.+... .+.|...++....... +.... .......
T Consensus 97 ~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 97 SIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred eEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 78888876443332222 34557789999988888776654 3778777775443211 10000 0000000
Q ss_pred cccCCCCCCccccccceEEEEecCCCcEEEEccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC
Q psy14257 398 VGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS 476 (841)
Q Consensus 398 ~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld 476 (841)
..+ ..+++... ++++++-...+.|.+.++.. ......+.........++++|...+|+.... .+.|...++.
T Consensus 176 ~~~---~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~v~d~~ 248 (369)
T 3zwl_B 176 DAA---TVAGWSTK-GKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSR---DTNSFLVDVS 248 (369)
T ss_dssp CCE---EEEEECGG-GCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEEETT
T ss_pred cce---eEEEEcCC-CCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecC---CceEEEEECC
Confidence 000 00111222 34444445568899999875 3333333334456789999998666666553 4678888876
Q ss_pred CCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCC-------------eEEEEEcCCCeeEEEEcCCCCCCcceE
Q psy14257 477 GEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSD-------------SIHTVTYDGKDHHVVLSNHDSLTHPFA 543 (841)
Q Consensus 477 G~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~-------------~I~~~~~dG~~~~~i~~~~~~l~~P~g 543 (841)
......... .-.....+++.+.+..|+.+..... .|...++........+..+ ......
T Consensus 249 ~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~v~~ 320 (369)
T 3zwl_B 249 TLQVLKKYE------TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGH--FGPLNT 320 (369)
T ss_dssp TCCEEEEEE------CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECC--SSCEEE
T ss_pred CCceeeeec------CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecc--cCcEEE
Confidence 544433333 2345678899988888877765432 5666666544333333322 233456
Q ss_pred EEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 544 IALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 544 la~~-~~~lY~td~~~~~i~~~~~ 566 (841)
+++. ++.++++-...+.|...+.
T Consensus 321 ~~~s~~~~~l~s~~~dg~v~iw~~ 344 (369)
T 3zwl_B 321 VAISPQGTSYASGGEDGFIRLHHF 344 (369)
T ss_dssp EEECTTSSEEEEEETTSEEEEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEEC
Confidence 7764 3455555545566655543
No 233
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.88 E-value=0.0088 Score=65.54 Aligned_cols=270 Identities=11% Similarity=0.071 Sum_probs=148.5
Q ss_pred cCCCeEEEEEecCCcccceEEEEeC-CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCc
Q psy14257 270 VIDDKIYNATLIGNSLSNIDVVVQT-GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNI 348 (841)
Q Consensus 270 ~~~~~I~~~~~~~~~~~~~~~~~~~-~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~ 348 (841)
...+.|+..++..+. ....+.. .-.....+++.+.+ -+++.. ..++.|..+++............-
T Consensus 110 ~~d~~v~lw~~~~~~---~~~~~~~~~~~~v~~v~~s~~~--~~l~~~--------~~dg~i~iwd~~~~~~~~~~~~~~ 176 (401)
T 4aez_A 110 ALERNVYVWNADSGS---VSALAETDESTYVASVKWSHDG--SFLSVG--------LGNGLVDIYDVESQTKLRTMAGHQ 176 (401)
T ss_dssp EETTEEEEEETTTCC---EEEEEECCTTCCEEEEEECTTS--SEEEEE--------ETTSCEEEEETTTCCEEEEECCCS
T ss_pred ECCCeEEEeeCCCCc---EeEeeecCCCCCEEEEEECCCC--CEEEEE--------CCCCeEEEEECcCCeEEEEecCCC
Confidence 355667776666553 1222222 22234556666533 233222 134678888765433222222233
Q ss_pred CCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccE-EEEeeeeecCCCccccCCCCCCccccc-cceEEEEecCCCcEE
Q psy14257 349 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERT-VSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIE 426 (841)
Q Consensus 349 ~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~-~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~ 426 (841)
.....++++ .+ ++++-...+.|...++...... ..+.. .... ..++.|. .+.++++-...+.|.
T Consensus 177 ~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~-------v~~~~~~~~~~~l~s~~~d~~v~ 242 (401)
T 4aez_A 177 ARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQG----HSSE-------VCGLAWRSDGLQLASGGNDNVVQ 242 (401)
T ss_dssp SCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEEC----CSSC-------EEEEEECTTSSEEEEEETTSCEE
T ss_pred CceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcC----CCCC-------eeEEEEcCCCCEEEEEeCCCeEE
Confidence 344556664 33 4455556678888888633222 11110 0000 0112222 255566666678999
Q ss_pred EEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCC
Q psy14257 427 VAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLT 506 (841)
Q Consensus 427 v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~ 506 (841)
+.++........+.........|+++|....|+.+-.+...+.|...++.......... .-.....+++.+.+.
T Consensus 243 iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~------~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 243 IWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD------AGSQVTSLIWSPHSK 316 (401)
T ss_dssp EEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE------CSSCEEEEEECSSSS
T ss_pred EccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe------CCCcEEEEEECCCCC
Confidence 99987654443343444567899999988888887653336788888886544433333 224578899998777
Q ss_pred EEEEEeC-CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 507 RIYWIDA-KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 507 ~LYw~d~-~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
.|+.+.. ..+.|...++.......+............+++. ++.+.++-...+.|...+..+++..
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC----
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCccc
Confidence 7776643 5678998888765443332211112345677774 4555556566778887777666644
No 234
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.88 E-value=9.2e-06 Score=61.99 Aligned_cols=42 Identities=31% Similarity=0.673 Sum_probs=37.1
Q ss_pred cccC-CCCCccCceeecCCCCceEEeecCCeeecCCCCceEeCCC
Q psy14257 173 HPCE-AWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSKSK 216 (841)
Q Consensus 173 ~eC~-~~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~~~ 216 (841)
+||. ..+.|+|.|.|+ .|+|+|.|++||.|..++++|.++++
T Consensus 2 dEC~~~~~~C~~~C~nt--~Gsy~C~C~~Gy~L~~d~~~C~dide 44 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEE--QNSVVCSCARGYTLADNGKACIPTGP 44 (55)
T ss_dssp CCTTTGGGGCSSEEEEE--TTEEEEECCTTEEECTTSSCEEESSS
T ss_pred ccccCCCCCcCcEeEcC--CCCeEEeCCCCCEECCCCCeeccCcc
Confidence 5776 356899999999 99999999999999999999999843
No 235
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.86 E-value=5.6e-06 Score=62.82 Aligned_cols=33 Identities=33% Similarity=0.735 Sum_probs=30.5
Q ss_pred CCCCCCcccCCCCcEEecCCCceecCCCCcccc
Q psy14257 139 SDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 139 ~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
..|.+.|.|++|+|.|.|++||.+..++++|.+
T Consensus 20 ~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 20 PQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 579899999999999999999999999999864
No 236
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.83 E-value=7.3e-06 Score=61.40 Aligned_cols=37 Identities=32% Similarity=0.849 Sum_probs=33.4
Q ss_pred CCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 595 C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
|..+|++|+|+|+..+ ++|+|.|+.||.|..|+++|.
T Consensus 1 C~~~ng~C~~~C~n~~-gs~~C~C~~Gy~L~~d~~tC~ 37 (51)
T 1kig_L 1 CSLDNGGCDQFCREER-SEVRCSCAHGYVLGDDSKSCV 37 (51)
T ss_dssp CCTTTTSSSSCCCEET-TEECCCCCTTEEECTTSSCEE
T ss_pred CCCCCCCcCCEeEcCC-CCeEEeCCCCcEECCCCCccc
Confidence 6677899999999865 679999999999999999998
No 237
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.81 E-value=0.0041 Score=73.21 Aligned_cols=227 Identities=12% Similarity=0.026 Sum_probs=132.8
Q ss_pred CCCEEEEccC--C-Ccccccccc----CcCCCceEEEEccCCEEEEEeCC---------CCeEEEEEecC------CccE
Q psy14257 327 DGGIEKAGMH--G-ENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSH---------LNTVESVRVDG------SERT 384 (841)
Q Consensus 327 ~~~I~~~~~d--G-~~~~~l~~~----~~~~P~glavD~~~~~lYwaD~~---------~~~I~~~~ldG------~~~~ 384 (841)
+.+|+..+.+ | ...+.+... .-..+.++++.+++++|+++... ...|++++++| +..+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 180 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR 180 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE
T ss_pred CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee
Confidence 4689999988 5 555554432 23456789999999999987643 25899999988 5554
Q ss_pred EEE-eeeeecCCCccccCCCCCCccccccceEEEEecCC-------CcEEEEccCC-c---eEEEEecCCCCCceeEEEc
Q psy14257 385 VSF-NLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNL-------DQIEVAKLSG-Q---FRRTLIAGDMESPRAIALD 452 (841)
Q Consensus 385 ~~~-~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~-------~~I~v~~~~G-~---~~~~l~~~~l~~P~giavd 452 (841)
.+. ..... . ...++...++.|+++.... ..|++.++++ . ..+.+.......+..+++.
T Consensus 181 ~l~~~~~~~----~------~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~s 250 (662)
T 3azo_A 181 ELSDDAHRF----V------TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWA 250 (662)
T ss_dssp ESSCSCSSE----E------CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEEC
T ss_pred EEEecCCCc----c------cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEEC
Confidence 443 11100 0 0113334457788876432 5799999984 3 3444443323567889999
Q ss_pred CCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCC------ceeEEEeccCCEEEEEe-CCCCeEEEEEcCC
Q psy14257 453 PRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAW------PNGLTLDYQLTRIYWID-AKSDSIHTVTYDG 525 (841)
Q Consensus 453 ~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~------P~glalD~~~~~LYw~d-~~~~~I~~~~~dG 525 (841)
|++. ||++.......+|++.++++...+.+.... ..... ...+++.+. ++++++- .+..+|+.+++++
T Consensus 251 pdg~-l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~---~~~~~p~w~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~d~~~ 325 (662)
T 3azo_A 251 PDGS-LIVATDRTGWWNLHRVDPATGAATQLCRRE---EEFAGPLWTPGMRWFAPLAN-GLIAVVHGKGAAVLGILDPES 325 (662)
T ss_dssp TTSC-EEEEECTTSSCEEEEECTTTCCEEESSCCS---SBSSCCCCSTTCCSEEECTT-SCEEEEEBSSSCEEEEEETTT
T ss_pred CCCe-EEEEECCCCCeEEEEEECCCCceeeccccc---ccccCccccccCceEeEeCC-CEEEEEEEcCccEEEEEECCC
Confidence 8866 555543322458999998665544443211 11111 245666544 4555543 3445788889887
Q ss_pred CeeEEEEcCCCCCCcceEE-EEecCeEEEEeCCC---CeEEEEeccCCcc
Q psy14257 526 KDHHVVLSNHDSLTHPFAI-ALFENHVYWTDWRT---NSVIRANKWNGSD 571 (841)
Q Consensus 526 ~~~~~i~~~~~~l~~P~gl-a~~~~~lY~td~~~---~~i~~~~~~~g~~ 571 (841)
...+.+... .....++ +..++.++++-... ..|+.++..+++.
T Consensus 326 ~~~~~l~~~---~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 326 GELVDAAGP---WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp TEEEECCSS---CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CcEEEecCC---CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 766555322 1223455 56667666654332 3677777655543
No 238
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.81 E-value=4.4e-06 Score=80.01 Aligned_cols=71 Identities=25% Similarity=0.592 Sum_probs=51.2
Q ss_pred ccccccCCCC-CCCcccCCCCcEEecCCCceecCCCCccccccc--cCC-CCCc----cCceeecCCCC----ceEEeec
Q psy14257 132 DEKQCLRSDC-HHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHP--CEA-WGTC----SQDCEPSVSNN----SYKCTCH 199 (841)
Q Consensus 132 ~eC~~~~~~C-~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~e--C~~-~~~C----s~~C~~~~~~g----~~~C~C~ 199 (841)
|||.. +.+| .+.|+|++++|+|.|++||.+.++++.|+++++ |.. ...| ...|.+. .+ +|.|.|+
T Consensus 4 deC~~-~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~--~~~~~~~~~C~C~ 80 (162)
T 1uzk_A 4 NECLD-PTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNE--IGVGVSKASCCCS 80 (162)
T ss_dssp CGGGS-TTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEE--EEEEECHHHHHTT
T ss_pred ccCCC-CCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCC--cCCcccCceeeCC
Confidence 56763 3467 468999999999999999999999999999887 852 2233 3467776 55 7888888
Q ss_pred CCeeec
Q psy14257 200 AGYELE 205 (841)
Q Consensus 200 ~G~~l~ 205 (841)
+||.+.
T Consensus 81 ~G~~~~ 86 (162)
T 1uzk_A 81 LGKAWG 86 (162)
T ss_dssp TCCEET
T ss_pred CCCCcC
Confidence 887753
No 239
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=97.81 E-value=0.13 Score=61.77 Aligned_cols=279 Identities=9% Similarity=-0.014 Sum_probs=151.7
Q ss_pred CceEeCCCCCCCCeEEeccCc-cccccccccccEEEEec-cccceeeecccccCCcceeEEEecCCCeEEEEEecCCccc
Q psy14257 209 FTCKSKSKNDSSPFVIFSNRH-ELRGVDLRTFNVIALIS-SLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLS 286 (841)
Q Consensus 209 ~~C~~~~~~~~~p~ll~s~~~-~I~~~~~~~~~~~~l~~-~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~ 286 (841)
..|.+. .+..++++.+... .|+..++........+. ....+.++.|...... |.. -...+.|...++..+.
T Consensus 16 v~~i~~--sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~--l~~-~~~dg~i~vw~~~~~~-- 88 (814)
T 3mkq_A 16 VKGIDF--HPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNW--IIV-GSDDFRIRVFNYNTGE-- 88 (814)
T ss_dssp EEEEEE--CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTE--EEE-EETTSEEEEEETTTCC--
T ss_pred eEEEEE--CCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCE--EEE-EeCCCeEEEEECCCCc--
Confidence 344444 3445566655543 45555555443322222 2345678888876433 444 4457888888876654
Q ss_pred ceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCC-ccccccccCcCCCceEEEEccCCEEEE
Q psy14257 287 NIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGE-NRSPLVTKNIQWPSSLVIDYNQDILYW 365 (841)
Q Consensus 287 ~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~-~~~~l~~~~~~~P~glavD~~~~~lYw 365 (841)
. ...+.........+++.+.++. ++.. ..++.|..++++.. .........-.....+++.+..+.+++
T Consensus 89 ~-~~~~~~~~~~v~~~~~s~~~~~--l~~~--------~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~ 157 (814)
T 3mkq_A 89 K-VVDFEAHPDYIRSIAVHPTKPY--VLSG--------SDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFA 157 (814)
T ss_dssp E-EEEEECCSSCEEEEEECSSSSE--EEEE--------ETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred E-EEEEecCCCCEEEEEEeCCCCE--EEEE--------cCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEE
Confidence 2 2223333345666777665432 2211 23567888887654 333333334455678899885566666
Q ss_pred EeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc---cceEEEEecCCCcEEEEccCCceEEEEecCC
Q psy14257 366 CDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI---GKNLYWVESNLDQIEVAKLSGQFRRTLIAGD 442 (841)
Q Consensus 366 aD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~---~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~ 442 (841)
+-...+.|...++............. ... ...++|. .+.++++-...+.|.+.++........+...
T Consensus 158 ~~~~dg~v~vwd~~~~~~~~~~~~~~---~~~-------v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 227 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQSTPNFTLTTGQ---ERG-------VNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (814)
T ss_dssp EEETTSEEEEEETTCSSCSEEEECCC---TTC-------CCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred EEeCCCeEEEEECCCCcceeEEecCC---CCC-------EEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 66677889998886554333222110 000 0123332 3566666667789999998755444444444
Q ss_pred CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 443 MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 443 l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
......++++|...+|+.... .+.|...++.......... .....+..+++.+.+.+++++-...+.+..++
T Consensus 228 ~~~v~~~~~~~~~~~l~~~~~---dg~v~vwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 228 MSNVSFAVFHPTLPIIISGSE---DGTLKIWNSSTYKVEKTLN-----VGLERSWCIATHPTGRKNYIASGFDNGFTVLS 299 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEET---TSCEEEEETTTCSEEEEEC-----CSSSSEEEEEECTTCGGGEEEEEETTEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEEee-----cCCCcEEEEEEccCCCceEEEEEeCCCEEEEE
Confidence 566789999998666655543 3567777765433322222 23344556666655554433333334444444
Q ss_pred c
Q psy14257 523 Y 523 (841)
Q Consensus 523 ~ 523 (841)
+
T Consensus 300 ~ 300 (814)
T 3mkq_A 300 L 300 (814)
T ss_dssp C
T ss_pred c
Confidence 3
No 240
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.77 E-value=0.0021 Score=74.64 Aligned_cols=112 Identities=12% Similarity=0.034 Sum_probs=69.4
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEec--CCCCCeEEEecC--CCCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDW--DSKAPRIERCSM--SGEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~--~~~~~~I~r~~l--dG~~~~~i~~~~~ 488 (841)
+.|.++....+.+.+..++|...+.+..........++.+|+ ..||+++. +....+|++.++ +|... .+
T Consensus 34 ~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l----- 106 (582)
T 3o4h_A 34 DKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RL----- 106 (582)
T ss_dssp TEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-EC-----
T ss_pred CeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cc-----
Confidence 556665443456666667777665554333235677888887 88998886 222458999998 77665 22
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEc
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLS 533 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~ 533 (841)
........+++.++++.++++....+.+...++++...+.+..
T Consensus 107 --~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~ 149 (582)
T 3o4h_A 107 --EAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR 149 (582)
T ss_dssp --TTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE
T ss_pred --cCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec
Confidence 1223344556766666666665555555577887776655543
No 241
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=97.77 E-value=0.015 Score=63.34 Aligned_cols=295 Identities=10% Similarity=-0.035 Sum_probs=160.4
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEe----cCCccc---ceEEEEeCC----------CCCccceEEeeecCcee
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATL----IGNSLS---NIDVVVQTG----------LSTAEGLAVDWIGKNLY 312 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~----~~~~~~---~~~~~~~~~----------l~~p~giavD~~~~~~y 312 (841)
.+.+++|...... ++.+-...+.|...++ ..+... .....+... -.....+++.+.+ -+
T Consensus 47 ~v~~~~~s~~~~~--~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~ 122 (425)
T 1r5m_A 47 NIVSSTWNPLDES--ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG--NS 122 (425)
T ss_dssp CCSEEEECSSCTT--EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS--SE
T ss_pred ceEEEEECCCCCc--EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCC--CE
Confidence 4567777765432 3344455677777777 544300 011222221 1134556666533 23
Q ss_pred EEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeee
Q psy14257 313 MFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVL 392 (841)
Q Consensus 313 ~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~ 392 (841)
++.. ..++.|..++.+|.....+. ..-.....|++.+.++.|+.+.. .+.|...++........+.....
T Consensus 123 l~~~--------~~dg~i~i~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d~~i~iwd~~~~~~~~~~~~~~~ 192 (425)
T 1r5m_A 123 IVTG--------VENGELRLWNKTGALLNVLN-FHRAPIVSVKWNKDGTHIISMDV-ENVTILWNVISGTVMQHFELKET 192 (425)
T ss_dssp EEEE--------ETTSCEEEEETTSCEEEEEC-CCCSCEEEEEECTTSSEEEEEET-TCCEEEEETTTTEEEEEECCC--
T ss_pred EEEE--------eCCCeEEEEeCCCCeeeecc-CCCccEEEEEECCCCCEEEEEec-CCeEEEEECCCCcEEEEeecccc
Confidence 3222 23467888887766554442 23345678899888887776654 57788888865543332221110
Q ss_pred cCCCc----cccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCC
Q psy14257 393 GSDSR----VGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAP 468 (841)
Q Consensus 393 ~~~~~----~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~ 468 (841)
..... ..-.......+.|..+..+++-...+.|.+.++........+.........|+++|...+|+.+.. .+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---d~ 269 (425)
T 1r5m_A 193 GGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASD---DG 269 (425)
T ss_dssp -------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEET---TS
T ss_pred CccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcC---CC
Confidence 00000 000000023455666667777777889999998764333333334456789999998776666553 46
Q ss_pred eEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-
Q psy14257 469 RIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF- 547 (841)
Q Consensus 469 ~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~- 547 (841)
.|...++.......... ..-.....+++.+.+ ++++-...+.|...++............ -.....+++.
T Consensus 270 ~i~i~d~~~~~~~~~~~-----~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~ 340 (425)
T 1r5m_A 270 TLRIWHGGNGNSQNCFY-----GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTLLALSIVD--GVPIFAGRISQ 340 (425)
T ss_dssp CEEEECSSSBSCSEEEC-----CCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEEEEEEECT--TCCEEEEEECT
T ss_pred EEEEEECCCCccceEec-----CCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcEeEecccC--CccEEEEEEcC
Confidence 77777775433322222 233456788998755 4455556789999998765444333332 2345677774
Q ss_pred cCeEEEEeCCCCeEEEEeccCCc
Q psy14257 548 ENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 548 ~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
++.++++-...+.|...+..++.
T Consensus 341 ~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 341 DGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp TSSEEEEEETTSCEEEEECHHHH
T ss_pred CCCEEEEEECCCeEEEEECCCCc
Confidence 34555555556777777655444
No 242
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=97.75 E-value=1.5e-05 Score=73.63 Aligned_cols=65 Identities=31% Similarity=0.708 Sum_probs=50.3
Q ss_pred ccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----ccccccCCCCC--CCcccCCCCcEEecCCCceecCCCCccc-c
Q psy14257 101 DCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DEKQCLRSDCH--HDCYNTPEGFMCVCPRDMYLQPDLITCS-Y 171 (841)
Q Consensus 101 ~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~eC~~~~~~C~--~~C~~~~g~~~C~C~~Gy~l~~d~~~C~-~ 171 (841)
.|.+. +.|++. ++.| .|+.||.+..| ++|. ..+|. ..|.++.++|+|.|++||. +..|+ +
T Consensus 52 ~C~~~-~~C~~~~g~~~C----~C~~G~~G~~C~~~~~~C~--~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~ 120 (135)
T 2vj3_A 52 PCQND-ATCLDQIGEFQC----ICMPGYEGVHCEVNTDECA--SSPCLHNGRCLDKINEFQCECPTGFT----GHLCQVD 120 (135)
T ss_dssp CCCSS-CEEEECSSCEEE----ECCTTEESSSSCEECCTTT--TCCSTTTCEEEECSSCEEEECCTTEE----SSSSCEE
T ss_pred CCCCC-CEEeCCCCCcee----eCCCCCcCCcceecCCccc--CCCcCCCCEeECCCCCeEEECCCCCc----CCccCcc
Confidence 57766 888875 6789 89999987777 5676 34675 4899999999999999997 67895 7
Q ss_pred ccccC
Q psy14257 172 LHPCE 176 (841)
Q Consensus 172 ~~eC~ 176 (841)
+++|.
T Consensus 121 i~~C~ 125 (135)
T 2vj3_A 121 LHHIL 125 (135)
T ss_dssp CC---
T ss_pred Ccccc
Confidence 89995
No 243
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.73 E-value=2.5e-05 Score=59.11 Aligned_cols=42 Identities=31% Similarity=0.766 Sum_probs=36.4
Q ss_pred ccccccCC---------CCCccCceeecCCCCceEEeecCCeeecCCCCceEe
Q psy14257 170 SYLHPCEA---------WGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213 (841)
Q Consensus 170 ~~~~eC~~---------~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~ 213 (841)
.+++||.. ...|.+.|.|+ .|+|+|.|++||.+..++++|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~--~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNY--VGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEE--TTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCCCEeECC--CCCeEEECCCCCeECCCCCccCC
Confidence 46788864 36899999999 99999999999999999999964
No 244
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.71 E-value=0.0019 Score=76.08 Aligned_cols=246 Identities=8% Similarity=-0.020 Sum_probs=135.3
Q ss_pred eEEEecCCCeEEEEEec--C-CcccceEEEEeC----CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCC
Q psy14257 265 VFWTDVIDDKIYNATLI--G-NSLSNIDVVVQT----GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG 337 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~--~-~~~~~~~~~~~~----~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG 337 (841)
|+++.....+|++.+++ + +. ...+... .......+++.+.++.+++.-.+............|+++++++
T Consensus 94 la~~~~~~~~l~~~~~~~~g~~~---~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 94 LVFTHFGDQRLYAFEPDAPGGAV---PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEBTTTCCEEEECTTSTTCCC---CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEECCCCeEEEEcCCCCCCCC---CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 56665556778887765 3 32 2222111 1224556777777655554332211000011224799999988
Q ss_pred ------CccccccccCcCCCceEEEEccCCEEEEEeCCC-------CeEEEEEecC-C---ccEEEEeeeeecCCCcccc
Q psy14257 338 ------ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL-------NTVESVRVDG-S---ERTVSFNLEVLGSDSRVGI 400 (841)
Q Consensus 338 ------~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~-------~~I~~~~ldG-~---~~~~~~~~~~~~~~~~~~i 400 (841)
...+.+....-....++++.+++++|+++.... ..|+.+++++ + ..+.+.... ...
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----~~~--- 243 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----EEA--- 243 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET----TBC---
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC----Cce---
Confidence 555544412234567789999999999887432 5799999984 3 333332210 000
Q ss_pred CCCCCCccccc-cceEEEEecCCC--cEEEEccCCceEEEEecCCC--CC------ceeEEEcCCCCeEEEEecCCCCCe
Q psy14257 401 PNCRPEDNLWI-GKNLYWVESNLD--QIEVAKLSGQFRRTLIAGDM--ES------PRAIALDPRFGLLFWTDWDSKAPR 469 (841)
Q Consensus 401 ~~~~~~avdw~-~~~LY~tD~~~~--~I~v~~~~G~~~~~l~~~~l--~~------P~giavd~~~g~Ly~td~~~~~~~ 469 (841)
...+.|. .++||++....+ .|++.++++...+.+..... .. ...+++.+.+. ++++... ...+
T Consensus 244 ----~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~ 317 (662)
T 3azo_A 244 ----IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAV 317 (662)
T ss_dssp ----EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCE
T ss_pred ----EcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-EEEEEEc-CccE
Confidence 0012222 255777665545 78888886555444443221 11 35688877644 4444433 4789
Q ss_pred EEEecCCCCCcEEEEEecccCCCCCCceeE-EEeccCCEEEEEeCCC---CeEEEEEcCCCeeEEEEcC
Q psy14257 470 IERCSMSGEHRSVIVRVDLLTSRGAWPNGL-TLDYQLTRIYWIDAKS---DSIHTVTYDGKDHHVVLSN 534 (841)
Q Consensus 470 I~r~~ldG~~~~~i~~~~~~~~~~~~P~gl-alD~~~~~LYw~d~~~---~~I~~~~~dG~~~~~i~~~ 534 (841)
|+++++++...+.+. .......++ +.| +++++++-... ..|+.+++++...+.+...
T Consensus 318 l~~~d~~~~~~~~l~------~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~ 378 (662)
T 3azo_A 318 LGILDPESGELVDAA------GPWTEWAATLTVS--GTRAVGVAASPRTAYEVVELDTVTGRARTIGAR 378 (662)
T ss_dssp EEEEETTTTEEEECC------SSCCEEEEEEEEE--TTEEEEEEEETTEEEEEEEEETTTCCEEEEESC
T ss_pred EEEEECCCCcEEEec------CCCCeEEEEEecC--CCEEEEEEcCCCCCCEEEEEECCCCceEEeecC
Confidence 999999876544332 122233455 554 56666554332 3788888887766666443
No 245
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.70 E-value=0.001 Score=72.38 Aligned_cols=150 Identities=7% Similarity=-0.046 Sum_probs=85.0
Q ss_pred ceEEEEecC-C----CcEEEEccCCceEEEEecCC-CCCceeEEEcCCCCeEEEEecCCCCCe--EEEecCCCCCcEEEE
Q psy14257 413 KNLYWVESN-L----DQIEVAKLSGQFRRTLIAGD-MESPRAIALDPRFGLLFWTDWDSKAPR--IERCSMSGEHRSVIV 484 (841)
Q Consensus 413 ~~LY~tD~~-~----~~I~v~~~~G~~~~~l~~~~-l~~P~giavd~~~g~Ly~td~~~~~~~--I~r~~ldG~~~~~i~ 484 (841)
+.|+++... . .+|+++++++...+.+.... ...+..++++|.+.+|+++........ |+..++++...+.+.
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~ 280 (396)
T 3c5m_A 201 STVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM 280 (396)
T ss_dssp EEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee
Confidence 446665432 2 47999999876655544321 224667899998877777643212344 999999766555554
Q ss_pred EecccCCCCCCceeEEEec-cCCEEEEEe---------------CCCCeEEEEEcCCCeeEEEEcCCCCC--------Cc
Q psy14257 485 RVDLLTSRGAWPNGLTLDY-QLTRIYWID---------------AKSDSIHTVTYDGKDHHVVLSNHDSL--------TH 540 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~-~~~~LYw~d---------------~~~~~I~~~~~dG~~~~~i~~~~~~l--------~~ 540 (841)
. .. ... +++.+ .+..|+.+. .....|+.+++++...+.+....... ..
T Consensus 281 ~-----~~--~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~ 352 (396)
T 3c5m_A 281 V-----MP--PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQIT 352 (396)
T ss_dssp E-----CC--SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTT
T ss_pred e-----CC--CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCC
Confidence 3 11 112 67776 555554432 13468999999877665554332110 01
Q ss_pred ceEEEE--ecCeEEEEeCC--CCeEEEEeccCCc
Q psy14257 541 PFAIAL--FENHVYWTDWR--TNSVIRANKWNGS 570 (841)
Q Consensus 541 P~gla~--~~~~lY~td~~--~~~i~~~~~~~g~ 570 (841)
+..+++ .+.+|+++... ...|+.++..++.
T Consensus 353 ~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 222344 34577776543 3357777755444
No 246
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.68 E-value=0.039 Score=61.38 Aligned_cols=230 Identities=6% Similarity=-0.097 Sum_probs=128.6
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEec--CCcccceEEEEe-CCCCCccceEEeeecCceeEEEeeecCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLI--GNSLSNIDVVVQ-TGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSS 326 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~--~~~~~~~~~~~~-~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~ 326 (841)
.+.+++|...... |+.+-...+.|...++. ++. ....+.. ..-..+..+++.+.++ +++..+ .
T Consensus 104 ~v~~~~~s~d~~~--l~~~~~~dg~v~iwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~--~l~~~~--------~ 169 (450)
T 2vdu_B 104 YIRNLRLTSDESR--LIACADSDKSLLVFDVDKTSKN--VLKLRKRFCFSKRPNAISIAEDDT--TVIIAD--------K 169 (450)
T ss_dssp CEEEEEECTTSSE--EEEEEGGGTEEEEEEECSSSSS--CEEEEEEEECSSCEEEEEECTTSS--EEEEEE--------T
T ss_pred ceEEEEEcCCCCE--EEEEECCCCeEEEEECcCCCCc--eeeeeecccCCCCceEEEEcCCCC--EEEEEe--------C
Confidence 3668888776443 67777778888888876 553 2333221 2223566777776543 333322 2
Q ss_pred CCCEEEEccCCCcccc----ccccCcCCCceEEEEcc---CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccc
Q psy14257 327 DGGIEKAGMHGENRSP----LVTKNIQWPSSLVIDYN---QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVG 399 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~----l~~~~~~~P~glavD~~---~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~ 399 (841)
++.|..+++....... ...........|++.+. +..|+.+ ...+.|+..++........+.. +....
T Consensus 170 ~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~---~h~~~-- 243 (450)
T 2vdu_B 170 FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS-DRDEHIKISHYPQCFIVDKWLF---GHKHF-- 243 (450)
T ss_dssp TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEE-ETTSCEEEEEESCTTCEEEECC---CCSSC--
T ss_pred CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEE-cCCCcEEEEECCCCceeeeeec---CCCCc--
Confidence 4678888765433222 22234456778999987 4455444 4568898888875443322110 00000
Q ss_pred cCCCCCCccccccceEEEEecCCCcEEEEccCC-ceEEEEecC------------------------CCCCceeEEEcCC
Q psy14257 400 IPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIAG------------------------DMESPRAIALDPR 454 (841)
Q Consensus 400 i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~------------------------~l~~P~giavd~~ 454 (841)
...+.|..++++++-...+.|.+.++.. +....+-.. .-....+|++.|.
T Consensus 244 -----v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~ 318 (450)
T 2vdu_B 244 -----VSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKN 318 (450)
T ss_dssp -----EEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSS
T ss_pred -----eEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCC
Confidence 0112222355666666778999999864 434443210 1124578999998
Q ss_pred CCeEEEEecCCCCCeEEEecC--C-CCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEe
Q psy14257 455 FGLLFWTDWDSKAPRIERCSM--S-GEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWID 512 (841)
Q Consensus 455 ~g~Ly~td~~~~~~~I~r~~l--d-G~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d 512 (841)
..+||.+... .+.|...++ . +.....+.... .. ..+..+++++ +.+|++-
T Consensus 319 ~~~l~~~~~~--d~~i~iw~~~~~~~~~l~~~~~~~---~~-~~v~~~~~~~--~~~~v~~ 371 (450)
T 2vdu_B 319 LPFVAFFVEA--TKCIIILEMSEKQKGDLALKQIIT---FP-YNVISLSAHN--DEFQVTL 371 (450)
T ss_dssp SSEEEEEETT--CSEEEEEEECSSSTTCEEEEEEEE---CS-SCEEEEEEET--TEEEEEE
T ss_pred CCEEEEEECC--CCeEEEEEeccCCCCceeeccEec---cC-CceEEEEecC--CcEEEEE
Confidence 8888888744 456666665 2 22222222211 22 6688999986 4555553
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.65 E-value=0.0052 Score=64.98 Aligned_cols=197 Identities=11% Similarity=0.127 Sum_probs=116.0
Q ss_pred CCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCC
Q psy14257 327 DGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPE 406 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~ 406 (841)
++.|.+.+.+|+.+..... .-.....+++|. ++.||+.. ..+.|..++.+|...... ... ...... .
T Consensus 116 ~~~l~~~d~~g~~~~~~~~-~~~~~~~~~~~~-~g~l~vgt-~~~~l~~~d~~g~~~~~~-~~~---~~~~~~------~ 182 (330)
T 3hxj_A 116 DGHLYAINTDGTEKWRFKT-KKAIYATPIVSE-DGTIYVGS-NDNYLYAINPDGTEKWRF-KTN---DAITSA------A 182 (330)
T ss_dssp TSEEEEECTTSCEEEEEEC-SSCCCSCCEECT-TSCEEEEC-TTSEEEEECTTSCEEEEE-ECS---SCCCSC------C
T ss_pred CCEEEEEcCCCCEEEEEcC-CCceeeeeEEcC-CCEEEEEc-CCCEEEEECCCCCEeEEE-ecC---CCceee------e
Confidence 4578888887654333221 222344566664 45566654 457888888884432222 111 100000 0
Q ss_pred ccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 407 DNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 407 avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
.+| ..++||+.. +.|.+++.+|+....... .......+++++. |.||++.. .+.|++.+.+|.....+..
T Consensus 183 ~~d-~~g~l~v~t---~~l~~~d~~g~~~~~~~~-~~~~~~~~~~~~~-g~l~v~t~---~~gl~~~~~~g~~~~~~~~- 252 (330)
T 3hxj_A 183 SIG-KDGTIYFGS---DKVYAINPDGTEKWNFYA-GYWTVTRPAISED-GTIYVTSL---DGHLYAINPDGTEKWRFKT- 252 (330)
T ss_dssp EEC-TTCCEEEES---SSEEEECTTSCEEEEECC-SSCCCSCCEECTT-SCEEEEET---TTEEEEECTTSCEEEEEEC-
T ss_pred EEc-CCCEEEEEe---CEEEEECCCCcEEEEEcc-CCcceeceEECCC-CeEEEEcC---CCeEEEECCCCCEeEEeeC-
Confidence 111 237788876 788888877765544332 2245778899864 78988874 3689999876655433321
Q ss_pred cccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEE-ecCeEEEEeC
Q psy14257 487 DLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIAL-FENHVYWTDW 556 (841)
Q Consensus 487 ~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~-~~~~lY~td~ 556 (841)
.-..+..+++| .+++||++.. .+.|.+++.+|.......... .....+.. .++.||+...
T Consensus 253 -----~~~~~~~~~~~-~~g~l~v~t~-~ggl~~~d~~g~~~~~~~~~~---~~~~~~~~d~~g~l~~gt~ 313 (330)
T 3hxj_A 253 -----GKRIESSPVIG-NTDTIYFGSY-DGHLYAINPDGTEKWNFETGS---WIIATPVIDENGTIYFGTR 313 (330)
T ss_dssp -----SSCCCSCCEEC-TTSCEEEECT-TCEEEEECTTSCEEEEEECSS---CCCSCCEECTTCCEEEECT
T ss_pred -----CCCccccceEc-CCCeEEEecC-CCCEEEECCCCcEEEEEEcCC---ccccceEEcCCCEEEEEcC
Confidence 22334567777 4688988765 468999998877665543221 23345566 5688888754
No 248
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.63 E-value=1.6e-05 Score=90.52 Aligned_cols=61 Identities=33% Similarity=0.746 Sum_probs=42.3
Q ss_pred ccCccCcCCcCCCCCC-CCCCCCCCCC-CCCCC----CCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 4 IIAYWKCDGDEDCKDG-SDELAEHCQD-RKCDE----SHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 4 i~~~~~Cdg~~dC~dg-sde~~~~C~~-~~C~~----~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
|....++. ...|.+. .|+. .|.. ..|.. .+|+|..+|+||+..|+|||..||. |+|||.+|
T Consensus 35 v~~p~q~g-G~~C~~~l~d~~--~C~~~~~C~~~~~c~~f~C~~~g~Ci~~~~~Cdg~~dC~--d~sdE~~c 101 (537)
T 3ojy_B 35 LLQPSQFH-GEPCNFSDKEVE--DCVTNRPCRSQVRCEGFVCAQTGRCVNRRLLCNGDNDCG--DQSDEANC 101 (537)
T ss_dssp EEECEETT-CCCCCSCSEEEE--ECCCCCCCCCCSCCSSEECTTTCCEECGGGTTSSSCCSS--SSCTTSSC
T ss_pred eccccccC-CCcCccchhhhc--cCCCccccccCCCCCccCcCCCCcEeeccccCCCCCCCC--CccccccC
Confidence 33333444 4456643 5655 5633 33422 7999976799999999999999999 88888654
No 249
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.59 E-value=0.00037 Score=80.99 Aligned_cols=212 Identities=10% Similarity=-0.001 Sum_probs=125.0
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeC----CCCeEEEEEe--cCCccEEEEeeeeecCCCccccCC
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDS----HLNTVESVRV--DGSERTVSFNLEVLGSDSRVGIPN 402 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~----~~~~I~~~~l--dG~~~~~~~~~~~~~~~~~~~i~~ 402 (841)
.+..+.++|...+.+..........+++.++ +.||+++. ....|+.+++ +|...+ +.... ...
T Consensus 45 ~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~-l~~~~------~~~--- 113 (582)
T 3o4h_A 45 SVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQR-LEAVK------PMR--- 113 (582)
T ss_dssp EEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEE-CTTSC------SBE---
T ss_pred ceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcccc-ccCCC------Cce---
Confidence 3444445665555544333334456677666 78888886 2337888888 776552 21100 000
Q ss_pred CCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCC-CCCeEEEecCCCCCcE
Q psy14257 403 CRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDS-KAPRIERCSMSGEHRS 481 (841)
Q Consensus 403 ~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~-~~~~I~r~~ldG~~~~ 481 (841)
..++.+.++.++++....+.+.+.++++...+.+..... ..++++|++.+|+++.... ....|++.++++...+
T Consensus 114 --~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 114 --ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp --EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred --eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 012333345666665555666688888776655554321 7899999988888665321 1267999999877666
Q ss_pred EEEEecccCCCCCCceeEEEeccCCEEEEEeCCC-CeEEEEEcCCCeeEEEEcCCCCCCcceEEE--------Ee-cCeE
Q psy14257 482 VIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKS-DSIHTVTYDGKDHHVVLSNHDSLTHPFAIA--------LF-ENHV 551 (841)
Q Consensus 482 ~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~-~~I~~~~~dG~~~~~i~~~~~~l~~P~gla--------~~-~~~l 551 (841)
.+.. .......+++.++++.|+.++... ..|+..++++...+ +..... ..+.+++ +. ++++
T Consensus 189 ~l~~------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~spdg~~ 259 (582)
T 3o4h_A 189 VFDS------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPS--KDFSSYRPTAITWLGYLPDGRL 259 (582)
T ss_dssp EECC------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSC--SHHHHHCCSEEEEEEECTTSCE
T ss_pred Eeec------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCC--cChhhhhhccccceeEcCCCcE
Confidence 5533 333458899999888898555432 28999999987776 443321 1222233 42 3477
Q ss_pred EEEeCCCCeEEEEe
Q psy14257 552 YWTDWRTNSVIRAN 565 (841)
Q Consensus 552 Y~td~~~~~i~~~~ 565 (841)
|++-...+.+....
T Consensus 260 ~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 260 AVVARREGRSAVFI 273 (582)
T ss_dssp EEEEEETTEEEEEE
T ss_pred EEEEEcCCcEEEEE
Confidence 77665555544343
No 250
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.55 E-value=0.017 Score=68.61 Aligned_cols=271 Identities=10% Similarity=0.053 Sum_probs=137.9
Q ss_pred CccccccccccccEEEEecccc----ceeeecccccCCcceeEEEecC--------CCeEEEEEecCCcccceEEEEeCC
Q psy14257 228 RHELRGVDLRTFNVIALISSLK----NTIALDFYYTPTANMVFWTDVI--------DDKIYNATLIGNSLSNIDVVVQTG 295 (841)
Q Consensus 228 ~~~I~~~~~~~~~~~~l~~~~~----~~~avd~~~~~~~~~lyw~d~~--------~~~I~~~~~~~~~~~~~~~~~~~~ 295 (841)
...|+..++.+.....+..... .+..+.|..+.+. |.++... .+.|+..++.++.. .. +...
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~--l~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~-l~~~ 109 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREY--ALFSYNVEPIYQHSYTGYYVLSKIPHGDP---QS-LDPP 109 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSE--EEEEESCCCCSSSCCCSEEEEEESSSCCC---EE-CCCT
T ss_pred CCCEEEEECCCCcEEEEeccccccccccceEEECCCCCE--EEEEecCccceeecceeeEEEEECCCCce---Ee-ccCC
Confidence 3456666776665555554322 2556677665433 5444221 25677777776541 11 1111
Q ss_pred CC---CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccC------------------cCCCceE
Q psy14257 296 LS---TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKN------------------IQWPSSL 354 (841)
Q Consensus 296 l~---~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~------------------~~~P~gl 354 (841)
.. .+..+++.|.++.+.+ .+ .+.|+..++++...+.+.... +..+.++
T Consensus 110 ~~~~~~~~~~~~SPdG~~la~-~~----------~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~ 178 (723)
T 1xfd_A 110 EVSNAKLQYAGWGPKGQQLIF-IF----------ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAH 178 (723)
T ss_dssp TCCSCCCSBCCBCSSTTCEEE-EE----------TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEE
T ss_pred ccccccccccEECCCCCEEEE-EE----------CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceE
Confidence 11 1455677766544432 11 136777877765544443321 2244789
Q ss_pred EEEccCCEEEEEeCCC---------------------------------CeEEEEEecCCcc-EEEEeeeeecCCCcccc
Q psy14257 355 VIDYNQDILYWCDSHL---------------------------------NTVESVRVDGSER-TVSFNLEVLGSDSRVGI 400 (841)
Q Consensus 355 avD~~~~~lYwaD~~~---------------------------------~~I~~~~ldG~~~-~~~~~~~~~~~~~~~~i 400 (841)
++.+++++|+++.... ..|+.+++++... +.+.........
T Consensus 179 ~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~----- 253 (723)
T 1xfd_A 179 WWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMR----- 253 (723)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGS-----
T ss_pred EECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCc-----
Confidence 9999999888875321 1455555554432 211100000000
Q ss_pred CCCCCCcccc--ccceEE-EEec--CCCcEEEEccCCceEEEEecC---CCCC--ceeEEEcCCCCeEEEE-ecCCC---
Q psy14257 401 PNCRPEDNLW--IGKNLY-WVES--NLDQIEVAKLSGQFRRTLIAG---DMES--PRAIALDPRFGLLFWT-DWDSK--- 466 (841)
Q Consensus 401 ~~~~~~avdw--~~~~LY-~tD~--~~~~I~v~~~~G~~~~~l~~~---~l~~--P~giavd~~~g~Ly~t-d~~~~--- 466 (841)
......+.| .+..|+ +++. ....|.+.++++.....+... .... +..+++.|++.+|++. .....
T Consensus 254 -~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 332 (723)
T 1xfd_A 254 -EYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRG 332 (723)
T ss_dssp -SEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSS
T ss_pred -cceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCc
Confidence 000001222 223342 2332 234677888865544433321 1111 3478999988778775 32211
Q ss_pred -CCeEEEec-CCCCC---cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC----CCeEEEEEcCCC
Q psy14257 467 -APRIERCS-MSGEH---RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK----SDSIHTVTYDGK 526 (841)
Q Consensus 467 -~~~I~r~~-ldG~~---~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~----~~~I~~~~~dG~ 526 (841)
..+|+..+ .++.. .+.+.. ........+++++++++||++-.. .-.|+.++++|.
T Consensus 333 ~~~~l~~~d~~~~~~~~~~~~l~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~ 396 (723)
T 1xfd_A 333 KFYHITVSSSQPNSSNDNIQSITS-----GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGN 396 (723)
T ss_dssp CEEEEEEECSSCCSSSCCCCBSCC-----SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTT
T ss_pred ceeEEEEEeccCCCCccceeEeec-----CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCC
Confidence 23788888 56554 333321 112122336899999999887543 347888888775
No 251
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=97.53 E-value=6.7e-06 Score=80.36 Aligned_cols=38 Identities=42% Similarity=0.760 Sum_probs=28.4
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCCC-CCCCCCccc
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQDR-KCDESHFTC 39 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~~-~C~~~~~~C 39 (841)
+|||..|+|||+.||.|||||....|... .|...+|.+
T Consensus 67 ~CI~~~~~CDG~~DC~DgSDE~~~~C~~~~~~~~~~~~g 105 (217)
T 2gtl_M 67 ECIHDLLFCDGEKDCRDGSDEDPETCSLNITHVGSSYTG 105 (217)
T ss_dssp CEEEGGGTTSSSCCSSSSTTTSHHHHCCGGGCTTCEEEE
T ss_pred cEechhhccCCCCCCCCCCccccCcCCCCcccCCccccc
Confidence 59999999999999999999974457544 333334433
No 252
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.51 E-value=3.6e-05 Score=74.04 Aligned_cols=83 Identities=27% Similarity=0.678 Sum_probs=62.9
Q ss_pred CeEecCCCCCCCCCCCCCCCCCcccccccccCCCCCC-CcccCCCCcEEecCCCceecCCCCccc-cccccCCCCCccC-
Q psy14257 107 RTCIPKALVCDGEPACFNGEDEMFCDEKQCLRSDCHH-DCYNTPEGFMCVCPRDMYLQPDLITCS-YLHPCEAWGTCSQ- 183 (841)
Q Consensus 107 ~~Ci~~~~~Cdg~~~C~~g~de~~C~eC~~~~~~C~~-~C~~~~g~~~C~C~~Gy~l~~d~~~C~-~~~eC~~~~~Cs~- 183 (841)
+.|+. .+.| .|..||.+..|++|...+ .|.+ .|. ++|+|.|++||. +..|+ ++++|....+|..
T Consensus 77 g~C~~-~~~C----~C~~G~~G~~C~~C~~~~-~C~~g~C~---~~~~C~C~~G~~----G~~C~~~~~~C~~~~~C~~~ 143 (169)
T 2vj2_A 77 GSCKL-PGDC----RCQYGWQGLYCDKCIPHP-GCVHGICN---EPWQCLCETNWG----GQLCDKDLNYCGTHQPCLNG 143 (169)
T ss_dssp EECSS-TTCC----EECTTEESSSSCEECCCT-TCSSEECS---STTCCEECTTEE----TTTTCEESCHHHHTCCCCTT
T ss_pred cccCC-CCee----ECCCCCCCCCcccCCCCC-CCCCCCcC---CCCEEeCCCCCC----CCcccCCCCCCCCCCCCCCC
Confidence 56655 5677 899999888898776432 3654 676 679999999997 66797 7888864457754
Q ss_pred -ceeecCCCCceEEeecCCee
Q psy14257 184 -DCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 184 -~C~~~~~~g~~~C~C~~G~~ 203 (841)
.|.++ ..++|+|.|++||.
T Consensus 144 g~C~~~-~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 144 GTCSNT-GPDKYQCSCPEGYS 163 (169)
T ss_dssp CEEEEC-STTCEEEECCTTCC
T ss_pred CEEcCC-CCCCcEeECCCCCc
Confidence 78873 15789999999996
No 253
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0085 Score=65.47 Aligned_cols=228 Identities=8% Similarity=0.009 Sum_probs=127.5
Q ss_pred CCCEEEEccCC----CccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCc------cEEEEeeeeecCCC
Q psy14257 327 DGGIEKAGMHG----ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSE------RTVSFNLEVLGSDS 396 (841)
Q Consensus 327 ~~~I~~~~~dG----~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~------~~~~~~~~~~~~~~ 396 (841)
++.|..++++. ..........-.....|++.+.++.++++-...+.|...++.... ...... .....
T Consensus 88 dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-~~~~~-- 164 (416)
T 2pm9_A 88 NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG-QSMSS-- 164 (416)
T ss_dssp SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC-CSCCS--
T ss_pred CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc-cccCC--
Confidence 46788888765 212222223445677899988755666666677888888887654 111100 00000
Q ss_pred ccccCCCCCCccccc--cceEEEEecCCCcEEEEccCCceEEEEecCC------CCCceeEEEcCCCCeEEEEecCCC-C
Q psy14257 397 RVGIPNCRPEDNLWI--GKNLYWVESNLDQIEVAKLSGQFRRTLIAGD------MESPRAIALDPRFGLLFWTDWDSK-A 467 (841)
Q Consensus 397 ~~~i~~~~~~avdw~--~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~------l~~P~giavd~~~g~Ly~td~~~~-~ 467 (841)
......+.|. ++.++++-...+.|.+.++........+... ......++++|.+..++++-.... .
T Consensus 165 -----~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~ 239 (416)
T 2pm9_A 165 -----VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND 239 (416)
T ss_dssp -----SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS
T ss_pred -----CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC
Confidence 0011233443 2567777777889999998765444333322 456789999998655555543311 1
Q ss_pred CeEEEecCCCC--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEE
Q psy14257 468 PRIERCSMSGE--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIA 545 (841)
Q Consensus 468 ~~I~r~~ldG~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla 545 (841)
+.|...++... ....+.. ..-.....+++.+.+++++++-...+.|...++........+..+ -.....++
T Consensus 240 ~~i~~~d~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~--~~~v~~~~ 312 (416)
T 2pm9_A 240 PSILIWDLRNANTPLQTLNQ-----GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPAR--GNWCFKTK 312 (416)
T ss_dssp CCCCEEETTSTTSCSBCCCS-----CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECS--SSCCCCEE
T ss_pred ceEEEEeCCCCCCCcEEeec-----CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCC--CCceEEEE
Confidence 26666666532 2222210 123456788888744555555555788999988654333333222 12345677
Q ss_pred Eec-C-eEEEEeCCCCeEEEEeccCC
Q psy14257 546 LFE-N-HVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 546 ~~~-~-~lY~td~~~~~i~~~~~~~g 569 (841)
+.. + .++++-...+.|...+..++
T Consensus 313 ~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 313 FAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp ECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred ECCCCCCEEEEEecCCcEEEEEccCC
Confidence 743 3 57777666677766665433
No 254
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.44 E-value=0.0083 Score=71.33 Aligned_cols=301 Identities=9% Similarity=0.026 Sum_probs=149.0
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCC---CccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLS---TAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~---~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
+..+.|.... + .+| + ...+.|+..++.++. ...++...-. .+..+++.|.++.+.+...+-. .-.....
T Consensus 19 ~~~~~~spdg-~-~~~-~-~~dg~i~~~d~~~g~---~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~-~~~~~~~ 90 (723)
T 1xfd_A 19 DPEAKWISDT-E-FIY-R-EQKGTVRLWNVETNT---STVLIEGKKIESLRAIRYEISPDREYALFSYNVEP-IYQHSYT 90 (723)
T ss_dssp CCCCCBSSSS-C-BCC-C-CSSSCEEEBCGGGCC---CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCC-CSSSCCC
T ss_pred ccccEEcCCC-c-EEE-E-eCCCCEEEEECCCCc---EEEEeccccccccccceEEECCCCCEEEEEecCcc-ceeecce
Confidence 3455565542 2 133 3 345677777766553 2233322111 2677888887654443221111 0011234
Q ss_pred CCEEEEccCCCccccccccC--cCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCC---
Q psy14257 328 GGIEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPN--- 402 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~--~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~--- 402 (841)
+.|+.+++++...+.+.... -..+..+++.+++++|.++.. +.|+..+++++..+.+........ ...|++.
T Consensus 91 ~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~-~~~g~~~~v~ 167 (723)
T 1xfd_A 91 GYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGV-IYNGLSDWLY 167 (723)
T ss_dssp SEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTT-EEEEECCHHH
T ss_pred eeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCc-eECcccceeE
Confidence 68889998876554443321 223667888888888877765 578888888766555432210000 0000000
Q ss_pred -----CCCCcccc--ccceEEEEecC---------------------------------CCcEEEEccCCceE-EEEecC
Q psy14257 403 -----CRPEDNLW--IGKNLYWVESN---------------------------------LDQIEVAKLSGQFR-RTLIAG 441 (841)
Q Consensus 403 -----~~~~avdw--~~~~LY~tD~~---------------------------------~~~I~v~~~~G~~~-~~l~~~ 441 (841)
....++.| .++.|+++... ...|.+.++++... ..+...
T Consensus 168 ~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 168 EEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp HHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 00001222 33445544321 12566677665442 222211
Q ss_pred C-----CCCceeEEEcCCCCeEEEE-ecCCCCCeEEEecCCCCCcEEEEEecccCCCCCC--ceeEEEeccCCEEEEE-e
Q psy14257 442 D-----MESPRAIALDPRFGLLFWT-DWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAW--PNGLTLDYQLTRIYWI-D 512 (841)
Q Consensus 442 ~-----l~~P~giavd~~~g~Ly~t-d~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~--P~glalD~~~~~LYw~-d 512 (841)
. ......+++.|++.+|+.. +.+.....|+..++++.....+..... ..... +..+++.+++++|+++ .
T Consensus 248 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 248 DDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES--EAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp CCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC--SSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred ccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc--CCEEeccCCCceEcCCCCeEEEEEe
Confidence 0 1234568999986666333 433224578888887655544433110 11111 2478898888888876 4
Q ss_pred CCCC------eEEEEE-cCCCe---eEEEEcCCCCCCcceEEEE--ecCeEEEEeCC----CCeEEEEec
Q psy14257 513 AKSD------SIHTVT-YDGKD---HHVVLSNHDSLTHPFAIAL--FENHVYWTDWR----TNSVIRANK 566 (841)
Q Consensus 513 ~~~~------~I~~~~-~dG~~---~~~i~~~~~~l~~P~gla~--~~~~lY~td~~----~~~i~~~~~ 566 (841)
...+ .|+.++ .++.. .+.+.... ......+++ .+.+||++... ...|++++.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~ 393 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD--WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANT 393 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS--SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECS
T ss_pred cccCCCcceeEEEEEeccCCCCccceeEeecCC--eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeC
Confidence 3333 677887 45554 33332211 111112344 35678776543 244666653
No 255
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.43 E-value=4.6e-05 Score=86.93 Aligned_cols=61 Identities=36% Similarity=0.779 Sum_probs=43.2
Q ss_pred eccCccCcCCcCCCCCC-CCCCCCCCCC-C------CCCCCCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 3 CIIAYWKCDGDEDCKDG-SDELAEHCQD-R------KCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 3 Ci~~~~~Cdg~~dC~dg-sde~~~~C~~-~------~C~~~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
.|....++.| ..|.+. .|+. .|.+ . .|. ++|+|..+++|||..|+|||..||. |+|||.+|
T Consensus 32 ~v~~p~q~gG-~~C~~~l~d~~--~C~~~~~c~~~~~c~-~~f~C~~~g~Ci~~~~~Cdg~~dC~--d~sDE~~C 100 (554)
T 3ojy_A 32 SLLQPNKFGG-TICSGDIWDQA--SCSSSTTCVRQAQCG-QDFQCKETGRCLKRHLVCNGDQDCL--DGSDEDDC 100 (554)
T ss_dssp CEEECBCSSC-CCCCSCSEEEE--ECCCCCCC--CCCCS-SSEECSSSCCEECGGGTTSSSCCSS--SCTTSSSC
T ss_pred eeccccccCC-CCCCCcccccc--CCCCCCCCcccCCCC-CcCccCCCCEEcccccccCCcccCC--CccccccC
Confidence 3444445544 457664 5555 5632 3 353 6999965789999999999999999 88888664
No 256
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.0066 Score=66.36 Aligned_cols=253 Identities=10% Similarity=0.034 Sum_probs=140.6
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCccc-ceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLS-NIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~-~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
.+.++.|.... . +..+-...+.|...++...... .....+...-.....+++.+.++++++. ...++
T Consensus 69 ~v~~~~~s~~~-~--~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s---------~~~dg 136 (416)
T 2pm9_A 69 KFNDLDWSHNN-K--IIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLAS---------GGNNG 136 (416)
T ss_dssp CEEEEEECSSS-S--CEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEE---------ECSSS
T ss_pred ceEEEEECCCC-C--eEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEE---------EcCCC
Confidence 46677786653 2 3444455678887776541100 1222222223345667777653333332 22456
Q ss_pred CEEEEccCCCc------c-ccc--cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccc
Q psy14257 329 GIEKAGMHGEN------R-SPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVG 399 (841)
Q Consensus 329 ~I~~~~~dG~~------~-~~l--~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~ 399 (841)
.|..+++.... . ..+ ....-.....|++.+.++.++++-...+.|...++........+....... +
T Consensus 137 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~----~ 212 (416)
T 2pm9_A 137 EIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNS----G 212 (416)
T ss_dssp CEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSS----C
T ss_pred eEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccc----c
Confidence 88888876543 1 111 122344677899998867777777778889999987654433322110000 0
Q ss_pred cCCCCCCccccc--cceEEEEecCCC---cEEEEccCCc-eEEEEec-CCCCCceeEEEcCCCCeEEEEecCCCCCeEEE
Q psy14257 400 IPNCRPEDNLWI--GKNLYWVESNLD---QIEVAKLSGQ-FRRTLIA-GDMESPRAIALDPRFGLLFWTDWDSKAPRIER 472 (841)
Q Consensus 400 i~~~~~~avdw~--~~~LY~tD~~~~---~I~v~~~~G~-~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r 472 (841)
. ......+.|. +..++++-...+ .|.+.++... .....+. ........++++|.++.++++-.. .+.|..
T Consensus 213 ~-~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~--dg~v~~ 289 (416)
T 2pm9_A 213 I-KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR--DNTVLL 289 (416)
T ss_dssp C-CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEES--SSEEEE
T ss_pred c-CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeC--CCCEEE
Confidence 0 0000122222 235666665555 8888888653 2222222 334567899999844544444433 467888
Q ss_pred ecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCC
Q psy14257 473 CSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGK 526 (841)
Q Consensus 473 ~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~ 526 (841)
.++.......... ..-.....+++.+.+.+++++-...+.|...++...
T Consensus 290 wd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 290 WNPESAEQLSQFP-----ARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp ECSSSCCEEEEEE-----CSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eeCCCCccceeec-----CCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 8876443333333 233456789998766466667666788888887654
No 257
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.38 E-value=0.2 Score=52.84 Aligned_cols=141 Identities=9% Similarity=0.049 Sum_probs=77.8
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
+++..+-...+.|.+.++........+.........|+++|...+|+... . .+.|...++.......... ..
T Consensus 176 g~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s-~--dg~i~iwd~~~~~~~~~~~-----~h 247 (321)
T 3ow8_A 176 GKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS-D--DGYIKIYDVQHANLAGTLS-----GH 247 (321)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC-T--TSCEEEEETTTCCEEEEEC-----CC
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc-C--CCeEEEEECCCcceeEEEc-----CC
Confidence 33344444556777777754433323333334568999999765555443 2 4567777765443332222 23
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEE
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRA 564 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~ 564 (841)
-.....+++.+.+..|+ +-...+.|...++........+... .....+|++. ++...++-...+.|...
T Consensus 248 ~~~v~~~~~sp~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~h--~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFV-SSSSDKSVKVWDVGTRTCVHTFFDH--QDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp SSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred CCceEEEEECCCCCEEE-EEeCCCcEEEEeCCCCEEEEEEcCC--CCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 44567899987666555 4445678888888754433333222 2345677774 34444444444555433
No 258
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.36 E-value=0.36 Score=57.47 Aligned_cols=127 Identities=14% Similarity=0.106 Sum_probs=76.5
Q ss_pred eEEEEecCCCEEE-EEECC--CCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcce-eEEee
Q psy14257 672 NNLNFDAANKKIY-WTDQE--YNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSG-LAIDW 747 (841)
Q Consensus 672 ~~v~~d~~~~~iy-w~d~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~g-lAvD~ 747 (841)
..++|.|..+.|+ |.... ...|++++++|.. ...+.. +...+.. +++|
T Consensus 322 ~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~--------------------------~~~lT~-g~~~v~~~~~~d- 373 (740)
T 4a5s_A 322 SEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKD--------------------------CTFITK-GTWEVIGIEALT- 373 (740)
T ss_dssp CCCEECTTSSEEEEEEECTTSCEEEEEEETTCSS--------------------------CEESCC-SSSCEEEEEEEC-
T ss_pred CCceEcCCCCEEEEEEEcCCCceEEEEEECCCCc--------------------------eEeccc-CCEEEEEEEEEe-
Confidence 4577999988887 66433 3579998888766 223222 2222333 3366
Q ss_pred cCCcEEEEecC----CCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCC
Q psy14257 748 IAQNMFIAVSS----PTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 823 (841)
Q Consensus 748 ~~~~LYw~~~~----~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~ 823 (841)
++.||++... .....|.+++++|...++.+..+... .......+++.|...++..+-.+...+.+...++++.
T Consensus 374 -~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~--~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~~ 450 (740)
T 4a5s_A 374 -SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNP--ERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVND 450 (740)
T ss_dssp -SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTST--TTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTTT
T ss_pred -CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCC--CCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCCC
Confidence 8889998532 23457889999987665444420000 0135667888887776655555443467777777755
Q ss_pred ceEEEe
Q psy14257 824 KRETVV 829 (841)
Q Consensus 824 ~~~~l~ 829 (841)
....+.
T Consensus 451 ~~~~~l 456 (740)
T 4a5s_A 451 KGLRVL 456 (740)
T ss_dssp EEEEEE
T ss_pred cEEEEe
Confidence 444443
No 259
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.36 E-value=0.25 Score=53.67 Aligned_cols=277 Identities=11% Similarity=-0.004 Sum_probs=155.2
Q ss_pred ccccccceEEEEecCCCcEEEEccCCceEEEEec-CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEE
Q psy14257 407 DNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA-GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVR 485 (841)
Q Consensus 407 avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~ 485 (841)
.++|.++.|+.. ...+.|.+.+++......+.. ..-.....+++.|...+|+.... .+.|...++..........
T Consensus 98 ~~~~s~~~l~~~-~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~ 173 (401)
T 4aez_A 98 LLDWSNLNVVAV-ALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG---NGLVDIYDVESQTKLRTMA 173 (401)
T ss_dssp CEEECTTSEEEE-EETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEEC
T ss_pred EEeecCCCEEEE-ECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC---CCeEEEEECcCCeEEEEec
Confidence 456666665544 356788888886544333333 23456789999998777766654 3577777775443332222
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC-CeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEE
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG-KDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIR 563 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG-~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~ 563 (841)
..-.....++++ .. ++++-...+.|...++.. .........+ -....++++. ++.++++-...+.|..
T Consensus 174 -----~~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 174 -----GHQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGH--SSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp -----CCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -----CCCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcCC--CCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 233345667765 34 444555578899888873 3222222222 2345677774 4455555555567777
Q ss_pred EeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-
Q psy14257 564 ANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS- 642 (841)
Q Consensus 564 ~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~- 642 (841)
.+..++.....+..... .. ...+.+|++. .+++.+
T Consensus 244 wd~~~~~~~~~~~~~~~--------------------~v----------~~~~~~p~~~--------------~ll~~~~ 279 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNA--------------------AV----------KAVAWCPWQS--------------NLLATGG 279 (401)
T ss_dssp EETTCSSEEEEECCCSS--------------------CC----------CEEEECTTST--------------TEEEEEC
T ss_pred ccCCCCCccEEecCCcc--------------------eE----------EEEEECCCCC--------------CEEEEec
Confidence 77655443332211100 00 0112222221 112222
Q ss_pred --cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEEC-CCCeEEEEEcccCceeeeeeeeeeeeccccc
Q psy14257 643 --RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQ-EYNEVKRSSIVGGQIQLVVDAVFEFYLTPLS 719 (841)
Q Consensus 643 --~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~ 719 (841)
....|+..++..... ... +..-..+.+++|.+..+.++.+.. ..+.|+..++......
T Consensus 280 gs~d~~i~i~d~~~~~~--~~~--~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~--------------- 340 (401)
T 4aez_A 280 GTMDKQIHFWNAATGAR--VNT--VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLT--------------- 340 (401)
T ss_dssp CTTTCEEEEEETTTCCE--EEE--EECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEE---------------
T ss_pred CCCCCEEEEEECCCCCE--EEE--EeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccce---------------
Confidence 245566666654321 111 122245789999999999888753 5788888888764411
Q ss_pred ccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc
Q psy14257 720 KRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE 772 (841)
Q Consensus 720 ~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~ 772 (841)
....+......+..|++.+.++.|+.+ ...+.|.+.++...
T Consensus 341 ---------~~~~~~~h~~~v~~~~~s~dg~~l~s~---~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 341 ---------KQVDIPAHDTRVLYSALSPDGRILSTA---ASDENLKFWRVYDG 381 (401)
T ss_dssp ---------EEEEEECCSSCCCEEEECTTSSEEEEE---CTTSEEEEEECCC-
T ss_pred ---------eEEEecCCCCCEEEEEECCCCCEEEEE---eCCCcEEEEECCCC
Confidence 111233455678999999988777766 35689999998654
No 260
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.33 E-value=0.15 Score=54.33 Aligned_cols=73 Identities=8% Similarity=-0.006 Sum_probs=45.1
Q ss_pred CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 443 MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 443 l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
......++++|...+|+.... .+.|...++.......... ..-.....+++.+.+. ++.+- ..+.|...+
T Consensus 202 ~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~ 271 (372)
T 1k8k_C 202 CGWVHGVCFSANGSRVAWVSH---DSTVCLADADKKMAVATLA-----SETLPLLAVTFITESS-LVAAG-HDCFPVLFT 271 (372)
T ss_dssp SSCEEEEEECSSSSEEEEEET---TTEEEEEEGGGTTEEEEEE-----CSSCCEEEEEEEETTE-EEEEE-TTSSCEEEE
T ss_pred CCeEEEEEECCCCCEEEEEeC---CCEEEEEECCCCceeEEEc-----cCCCCeEEEEEecCCC-EEEEE-eCCeEEEEE
Confidence 346788999988667666653 4678777775433333333 2334568899986544 44444 566777776
Q ss_pred cCC
Q psy14257 523 YDG 525 (841)
Q Consensus 523 ~dG 525 (841)
++.
T Consensus 272 ~~~ 274 (372)
T 1k8k_C 272 YDS 274 (372)
T ss_dssp EET
T ss_pred ccC
Confidence 655
No 261
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.33 E-value=0.075 Score=57.14 Aligned_cols=127 Identities=12% Similarity=0.125 Sum_probs=74.4
Q ss_pred CCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeec
Q psy14257 669 FSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWI 748 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~ 748 (841)
..+.+|+|.|..+.++.+-...+.|+..++.... ....+......+..|++.+.
T Consensus 227 ~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~--------------------------~~~~~~~~~~~v~~l~~sp~ 280 (357)
T 4g56_B 227 TIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPD--------------------------SAQTSAVHSQNITGLAYSYH 280 (357)
T ss_dssp SCEEEEEECTTSTTEEEEEESSSCEEEEESSCGG--------------------------GCEEECCCSSCEEEEEECSS
T ss_pred ccccchhhhhcccceEEEeecccceeEEECCCCc--------------------------EeEEEeccceeEEEEEEcCC
Confidence 3467899999887777766577889888876544 11223334556788999888
Q ss_pred CCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEE
Q psy14257 749 AQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 828 (841)
Q Consensus 749 ~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l 828 (841)
++++..+- ...++|.+.+++.......+.. -....+|+..|..+.++.+-.....-+|......|....+|
T Consensus 281 ~~~~lasg--s~D~~i~iwd~~~~~~~~~~~H-------~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~i 351 (357)
T 4g56_B 281 SSPFLASI--SEDCTVAVLDADFSEVFRDLSH-------RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENLI 351 (357)
T ss_dssp SSCCEEEE--ETTSCEEEECTTSCEEEEECCC-------SSCEEEEEECSSSTTEEEEEETTSCEEEEECC---------
T ss_pred CCCEEEEE--eCCCEEEEEECCCCcEeEECCC-------CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccccc
Confidence 77666652 3567899999876533222222 25688999999767666654433212344444455555555
Q ss_pred ec
Q psy14257 829 VS 830 (841)
Q Consensus 829 ~~ 830 (841)
..
T Consensus 352 ~~ 353 (357)
T 4g56_B 352 AT 353 (357)
T ss_dssp --
T ss_pred CC
Confidence 44
No 262
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.29 E-value=0.28 Score=52.75 Aligned_cols=299 Identities=10% Similarity=-0.071 Sum_probs=155.1
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCc----ccceEEEEeCCCCCccceEEeee----cCc-eeEEEeeecC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNS----LSNIDVVVQTGLSTAEGLAVDWI----GKN-LYMFWAFWSL 320 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~----~~~~~~~~~~~l~~p~giavD~~----~~~-~y~~~td~~~ 320 (841)
.+.+++|.. . ++++-..++.|...++..+. .. ....+...-.....+++.+. +.+ -+++..
T Consensus 18 ~i~~~~~~~---~--~l~s~~~dg~i~iw~~~~~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~---- 87 (397)
T 1sq9_A 18 DIFSVSACN---S--FTVSCSGDGYLKVWDNKLLDNENPKD-KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT---- 87 (397)
T ss_dssp CEEEEEECS---S--EEEEEETTSEEEEEESBCCTTCCGGG-GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE----
T ss_pred CeEEEEecC---C--eEEEEcCCCEEEEEECCCcccccCCC-cceEEecCCCcEEEEEEecccccCCccccEEEEE----
Confidence 456777755 2 56666677888888876553 11 12223333334566777664 200 222222
Q ss_pred CCCCCCCCCEEEEccCCCcc------ccccccC----cCCCceEEEE----ccCCE-EEEEeCCCCeEEEEEecC-----
Q psy14257 321 SPSNSSDGGIEKAGMHGENR------SPLVTKN----IQWPSSLVID----YNQDI-LYWCDSHLNTVESVRVDG----- 380 (841)
Q Consensus 321 ~~~~~~~~~I~~~~~dG~~~------~~l~~~~----~~~P~glavD----~~~~~-lYwaD~~~~~I~~~~ldG----- 380 (841)
..++.|..+++..... ..+.... -.....+++. +.++. |+.+ ...+.|...++..
T Consensus 88 ----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~-~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 88 ----SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVAT-DVKGTTYIWKFHPFADES 162 (397)
T ss_dssp ----ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEE-ETTSCEEEEEEESSSSHH
T ss_pred ----cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEE-eCCCcEEEEeCCcccccc
Confidence 2346788888765442 2221111 2567789999 77777 5544 4567788888765
Q ss_pred --CccE-----EEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecC---C---CCCce
Q psy14257 381 --SERT-----VSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAG---D---MESPR 447 (841)
Q Consensus 381 --~~~~-----~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~---~---l~~P~ 447 (841)
.... .+......... .......++|....++++-...+.|.+.++........+.. . .....
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~ 237 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMT-----PSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 237 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSS-----SCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEE
T ss_pred ccceeeccCcceeeeeeccccC-----CCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccc
Confidence 2222 22110000000 00011233443222666666778999999875443333333 2 45678
Q ss_pred eEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC--------CCCCCceeEEEeccCCEEEEEeCCCCeEE
Q psy14257 448 AIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT--------SRGAWPNGLTLDYQLTRIYWIDAKSDSIH 519 (841)
Q Consensus 448 giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~--------~~~~~P~glalD~~~~~LYw~d~~~~~I~ 519 (841)
.|+++|...+|+........+.|...++............... ..-.....+++.+.+..|+.+. ..+.|.
T Consensus 238 ~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~ 316 (397)
T 1sq9_A 238 SVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLR 316 (397)
T ss_dssp EEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEE
T ss_pred eEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEE
Confidence 9999998666665543200157777777543322222200000 0234567899987666665444 567899
Q ss_pred EEEcCCCeeEEEEc------CC------C-------CCCcceEEEEecC-----------eEEEEeCCCCeEEEEeccCC
Q psy14257 520 TVTYDGKDHHVVLS------NH------D-------SLTHPFAIALFEN-----------HVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 520 ~~~~dG~~~~~i~~------~~------~-------~l~~P~gla~~~~-----------~lY~td~~~~~i~~~~~~~g 569 (841)
..++........+. .. + .-....++++..+ .++++-...+.|...+..+|
T Consensus 317 iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 317 FWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp EEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC-
T ss_pred EEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCC
Confidence 99987554433333 11 0 0123467777544 46666656677766665444
No 263
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.26 E-value=0.089 Score=57.28 Aligned_cols=275 Identities=10% Similarity=0.010 Sum_probs=150.1
Q ss_pred EEEEecCCCcEEEEccCCceEE----EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC--------CcEE
Q psy14257 415 LYWVESNLDQIEVAKLSGQFRR----TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE--------HRSV 482 (841)
Q Consensus 415 LY~tD~~~~~I~v~~~~G~~~~----~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~--------~~~~ 482 (841)
+.++-...+.|.+.+++..... ..+........+|+++|.++.++.+-.. .+.|...+++.. ....
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~--dg~v~vw~~~~~~~~~~~~~~~~~ 126 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSE--DCTVMVWEIPDGGLVLPLREPVIT 126 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEET--TSEEEEEECCTTCCSSCBCSCSEE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeC--CCeEEEEEccCCCCccccCCceEE
Confidence 3344455678888887543221 1122233456899999944444444433 456666666432 2223
Q ss_pred EEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEE--cCCCCCCcceEEEEe-cCeEEEEeCCCC
Q psy14257 483 IVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVL--SNHDSLTHPFAIALF-ENHVYWTDWRTN 559 (841)
Q Consensus 483 i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~--~~~~~l~~P~gla~~-~~~lY~td~~~~ 559 (841)
+ . ..-.....+++.+.+.+++++-...+.|...++........+ ..+ -.....+++. ++.++++-...+
T Consensus 127 ~-~-----~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~ 198 (402)
T 2aq5_A 127 L-E-----GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVH--PDTIYSVDWSRDGALICTSCRDK 198 (402)
T ss_dssp E-E-----CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTC--CSCEEEEEECTTSSCEEEEETTS
T ss_pred e-c-----CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCC--CCceEEEEECCCCCEEEEEecCC
Confidence 2 2 234567889998776556666556788999998766544444 222 2344677774 454555545567
Q ss_pred eEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeE
Q psy14257 560 SVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFI 639 (841)
Q Consensus 560 ~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l 639 (841)
.|...+..+++....+...... .... .....|+ ..+|
T Consensus 199 ~i~iwd~~~~~~~~~~~~~~~~------------------~~~~----------~~~~~~~---------------~~~l 235 (402)
T 2aq5_A 199 RVRVIEPRKGTVVAEKDRPHEG------------------TRPV----------HAVFVSE---------------GKIL 235 (402)
T ss_dssp EEEEEETTTTEEEEEEECSSCS------------------SSCC----------EEEECST---------------TEEE
T ss_pred cEEEEeCCCCceeeeeccCCCC------------------Ccce----------EEEEcCC---------------CcEE
Confidence 7877776665544333111000 0000 0011111 2233
Q ss_pred Eee----cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeec
Q psy14257 640 IFS----RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYL 715 (841)
Q Consensus 640 ~~~----~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~ 715 (841)
+.+ ....|+..++..... ............+..++|++.++.||.+....+.|+..++.....-
T Consensus 236 ~~g~~~~~d~~i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~----------- 303 (402)
T 2aq5_A 236 TTGFSRMSERQVALWDTKHLEE-PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF----------- 303 (402)
T ss_dssp EEEECTTCCEEEEEEETTBCSS-CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC-----------
T ss_pred EEeccCCCCceEEEEcCccccC-CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc-----------
Confidence 333 344566666654322 1112223334567899999999999999877889999988764400
Q ss_pred ccccccccccCceEEEEe-eCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc
Q psy14257 716 TPLSKRSSIVGGQIQLVV-DAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE 772 (841)
Q Consensus 716 ~~~~~~~~~~~~~~~~i~-~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~ 772 (841)
...+. -..-..+.+|++.+.+..+.-. ...+.+.++...
T Consensus 304 -------------~~~l~~~~~~~~v~~~~~sp~~~~~~s~-----~~~~~~~~l~~~ 343 (402)
T 2aq5_A 304 -------------LHYLSMFSSKESQRGMGYMPKRGLEVNK-----CEIARFYKLHER 343 (402)
T ss_dssp -------------EEEEEEECCSSCCSEEEECCGGGSCGGG-----TEEEEEEEEETT
T ss_pred -------------eEeecccccCCcccceEEecccccceec-----ceeEEEEEcCCC
Confidence 00111 1133567889988776554322 236777777554
No 264
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.24 E-value=0.041 Score=60.06 Aligned_cols=130 Identities=8% Similarity=-0.065 Sum_probs=74.6
Q ss_pred eEEEEecCCCcEEEEccCCc-eEEEEecCC-CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-EEEEEecccC
Q psy14257 414 NLYWVESNLDQIEVAKLSGQ-FRRTLIAGD-MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-SVIVRVDLLT 490 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~-~~~~l~~~~-l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-~~i~~~~~~~ 490 (841)
+++++-...+.|.+.++... ....+.... -..+..+++.|.+.+|+..-.......|...++..... ..+...
T Consensus 189 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~---- 264 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQEL---- 264 (402)
T ss_dssp SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEEC----
T ss_pred CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEec----
Confidence 33344444567777776543 333331222 22478899998744444331111256788888765332 222221
Q ss_pred CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe--eEEEEcCCCCCCcceEEEEec
Q psy14257 491 SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD--HHVVLSNHDSLTHPFAIALFE 548 (841)
Q Consensus 491 ~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~--~~~i~~~~~~l~~P~gla~~~ 548 (841)
..-.....+++++.+..||++-...+.|...++.... ...+.... .-....++++..
T Consensus 265 ~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~-~~~~v~~~~~sp 323 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS-SKESQRGMGYMP 323 (402)
T ss_dssp CCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-CSSCCSEEEECC
T ss_pred cCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-cCCcccceEEec
Confidence 2334578899999889999888777889999988655 44433221 113346777754
No 265
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.23 E-value=0.014 Score=64.64 Aligned_cols=252 Identities=8% Similarity=0.031 Sum_probs=143.0
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCC--------cccceEEEEeCCCCCccceEEeeecCceeEEEeeecC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGN--------SLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSL 320 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~--------~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~ 320 (841)
..+..+.|....+. ++.+-...+.|...++... .. .....+...-..+.+|++.+.+.. +++-
T Consensus 129 ~~v~~l~~~p~~~~--~lat~~~dg~V~vwd~~~~~~~~~~~~~~-~~~~~~~~h~~~v~~l~~~~~~~~-~l~s----- 199 (430)
T 2xyi_A 129 GEVNRARYMPQNAC--VIATKTPSSDVLVFDYTKHPSKPEPSGEC-QPDLRLRGHQKEGYGLSWNPNLNG-YLLS----- 199 (430)
T ss_dssp SCCSEEEEETTEEE--EEEEECSSSCEEEEEGGGSCSSCCTTCCC-CCSEEEECCSSCCCCEEECTTSTT-EEEE-----
T ss_pred CcEEEEEECCCCCc--EEEEECCCCcEEEEECCCcccccCccccC-CCcEEecCCCCCeEEEEeCCCCCC-eEEE-----
Confidence 34566677664333 6666667788888877541 11 122223333345666777665432 3321
Q ss_pred CCCCCCCCCEEEEccCCCcc-cc------ccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCc-cEEEEeeeee
Q psy14257 321 SPSNSSDGGIEKAGMHGENR-SP------LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSE-RTVSFNLEVL 392 (841)
Q Consensus 321 ~~~~~~~~~I~~~~~dG~~~-~~------l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~-~~~~~~~~~~ 392 (841)
...++.|..+++..... .. .....-.....|++.+.++.++++....+.|...++.... .+.+....
T Consensus 200 ---~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-- 274 (430)
T 2xyi_A 200 ---ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-- 274 (430)
T ss_dssp ---ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE--
T ss_pred ---EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee--
Confidence 23467888888765211 11 1112334567899988788888888889999999987542 11111110
Q ss_pred cCCCccccCCCCCCcccc--ccceEEEEecCCCcEEEEccCC-ce-EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCC
Q psy14257 393 GSDSRVGIPNCRPEDNLW--IGKNLYWVESNLDQIEVAKLSG-QF-RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAP 468 (841)
Q Consensus 393 ~~~~~~~i~~~~~~avdw--~~~~LY~tD~~~~~I~v~~~~G-~~-~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~ 468 (841)
..... ...+.| .+..++++-...+.|.+.++.. .. ..++ .........|+++|...+++.+......-
T Consensus 275 ~~~~~-------v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 275 AHTAE-------VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp CCSSC-------EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred cCCCC-------eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 00000 012222 2356888888888999999875 22 3333 23345678999999877777776552233
Q ss_pred eEEEecCCCCCc----------EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 469 RIERCSMSGEHR----------SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 469 ~I~r~~ldG~~~----------~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
+|+.....+... ..+... ...-..+..+++.+.+..++++-...+.|...+++.
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIH---GGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEEC---CCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred EEEeCCCCccccCccccccCCcceEEEc---CCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 444444322211 222221 023346889999976664776766678888877654
No 266
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.23 E-value=9.8e-05 Score=69.24 Aligned_cols=50 Identities=32% Similarity=0.620 Sum_probs=43.7
Q ss_pred CCCCCC---CCccc---ccccccCCCCCC-CcccCCCCcEEecCCCceecCCCCccc
Q psy14257 121 ACFNGE---DEMFC---DEKQCLRSDCHH-DCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 121 ~C~~g~---de~~C---~eC~~~~~~C~~-~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.|+.|| ++..| +||...++.|++ .|+|++++|+|.|++||.+..++++|.
T Consensus 91 ~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 91 ICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp TTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred cCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 899999 46678 789876778975 899999999999999999999998874
No 267
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.22 E-value=0.21 Score=59.20 Aligned_cols=299 Identities=7% Similarity=0.019 Sum_probs=153.3
Q ss_pred CCCCeEEEEecCC--CCCeEEEecCCCCCcEEEEEecccC-CCCCCceeEEEeccCCEEEEEeCCCC----eEEEEEcCC
Q psy14257 453 PRFGLLFWTDWDS--KAPRIERCSMSGEHRSVIVRVDLLT-SRGAWPNGLTLDYQLTRIYWIDAKSD----SIHTVTYDG 525 (841)
Q Consensus 453 ~~~g~Ly~td~~~--~~~~I~r~~ldG~~~~~i~~~~~~~-~~~~~P~glalD~~~~~LYw~d~~~~----~I~~~~~dG 525 (841)
|.++++|++-... ..+.|++.+.++...+++++..... ..-..-.++++.+++++|.++-...+ .|+..++++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 5677888775332 2347899998777677666521110 11112457889988888877643322 899999988
Q ss_pred CeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCC---------------eEEEEeccCCcce-EEEecccCCCceecc
Q psy14257 526 KDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTN---------------SVIRANKWNGSDV-TLIQRTLTQPFIYVN 587 (841)
Q Consensus 526 ~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~---------------~i~~~~~~~g~~~-~~i~~~~~~p~~~h~ 587 (841)
.......... . ...++++. +..||++..... .|++.+..++... .++.....
T Consensus 161 g~~~~~~~~~--~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~------- 230 (710)
T 2xdw_A 161 AKELPDVLER--V-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPD------- 230 (710)
T ss_dssp TEEEEEEEEE--E-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTT-------
T ss_pred CCCCcccccC--c-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCC-------
Confidence 7654322111 1 12356663 456777653321 2443333332211 11110000
Q ss_pred CCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec------CCeEEEEecCC------C
Q psy14257 588 GVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR------PREIRGVDLEH------P 655 (841)
Q Consensus 588 qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~------~~~i~~~~l~~------~ 655 (841)
...+. .+....+| ..+|+++. ...|+.++++. +
T Consensus 231 -----------------------~~~~~----~~~~~SpD--------g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 275 (710)
T 2xdw_A 231 -----------------------EPKWM----GGAELSDD--------GRYVLLSIREGCDPVNRLWYCDLQQESNGITG 275 (710)
T ss_dssp -----------------------CTTCE----EEEEECTT--------SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCS
T ss_pred -----------------------CCeEE----EEEEEcCC--------CCEEEEEEEccCCCccEEEEEECcccccccCC
Confidence 00000 00111122 23343332 34677777754 2
Q ss_pred CccccceeecCCCCCceEEEEecCCCEEEEEECC---CCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEE
Q psy14257 656 YYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQE---YNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLV 732 (841)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~---~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 732 (841)
.. ....+... ... ..-.+++..+.||+.... ...|+++++++...+ ..+.+
T Consensus 276 ~~-~~~~l~~~-~~~-~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-----------------------~~~~l 329 (710)
T 2xdw_A 276 IL-KWVKLIDN-FEG-EYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-----------------------KWKVL 329 (710)
T ss_dssp SC-CCEEEECS-SSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-----------------------GCEEE
T ss_pred cc-ceEEeeCC-CCc-EEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------------------cceec
Confidence 11 11122111 111 222467778999988643 347888888764300 01233
Q ss_pred eeCCC-CCcceeEEeecCCcEEEEecCCCCCeEEEEec-CCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecC-
Q psy14257 733 VDAGI-SHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL-EGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVT- 809 (841)
Q Consensus 733 ~~~~~-~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l-~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~- 809 (841)
+...- ..+.++++.. .+.|+++..+....+|.+.++ +|+..+.+... .....++++.|....|+++-.+
T Consensus 330 ~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-------~~~v~~~~~s~d~~~l~~~~ss~ 401 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIFPLE-------VGSVVGYSGQKKDTEIFYQFTSF 401 (710)
T ss_dssp ECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEECCC-------SSEEEEEECCTTCSEEEEEEECS
T ss_pred cCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEecCCC-------CceEEEEecCCCCCEEEEEEeCC
Confidence 33211 1344455442 667877754445567888888 67644444322 2356677888876677766443
Q ss_pred CCcceEEEEecCCCc--eEEEec
Q psy14257 810 KQVVTIEMAFMDGTK--RETVVS 830 (841)
Q Consensus 810 ~~~~~I~~~~~dG~~--~~~l~~ 830 (841)
..+++|.+.+++... .+++..
T Consensus 402 ~~P~~i~~~d~~tg~~~~~~l~~ 424 (710)
T 2xdw_A 402 LSPGIIYHCDLTKEELEPRVFRE 424 (710)
T ss_dssp SCCCEEEEEETTSSSCCCEEEEE
T ss_pred CCCCEEEEEECCCCccceEEeee
Confidence 233689999987666 565554
No 268
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.17 E-value=0.44 Score=52.68 Aligned_cols=255 Identities=11% Similarity=0.018 Sum_probs=125.7
Q ss_pred CceeEEEeccCCEEEEEeCCCCeEEEEEcC--C-CeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCC
Q psy14257 495 WPNGLTLDYQLTRIYWIDAKSDSIHTVTYD--G-KDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 495 ~P~glalD~~~~~LYw~d~~~~~I~~~~~d--G-~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g 569 (841)
....+++.+.+..|+.+-...+.|...++. . ...+.+... ..-..+.+|++. +.+|+.++. .+.|+.++..++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~~ 181 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRF-CFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINSI 181 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEE-ECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTSC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecc-cCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCCc
Confidence 467899998888877776667888888877 3 444444321 112345778874 345655543 566766665544
Q ss_pred cceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEE
Q psy14257 570 SDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIR 648 (841)
Q Consensus 570 ~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~ 648 (841)
......... +.-| .+...|. .+.+|. ....+|+.+. ...|+
T Consensus 182 ~~~~~~~~~----~~~h------------------------~~~v~~~-----~~sp~~-----~~~~~l~s~~~d~~i~ 223 (450)
T 2vdu_B 182 PEEKFTQEP----ILGH------------------------VSMLTDV-----HLIKDS-----DGHQFIITSDRDEHIK 223 (450)
T ss_dssp CCSSCCCCC----SEEC------------------------SSCEEEE-----EEEECT-----TSCEEEEEEETTSCEE
T ss_pred cccccccee----eecc------------------------cCceEEE-----EEcCCC-----CCCcEEEEEcCCCcEE
Confidence 321100000 0000 0001111 111110 0022344433 34566
Q ss_pred EEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCce
Q psy14257 649 GVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQ 728 (841)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (841)
..++..... +..+.......+.+++|. ..+.|+... ..++|+..++........+.... ...++.... ...
T Consensus 224 vwd~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s~~-~d~~v~vwd~~~~~~~~~~~~~~--~~~~~~~~~---~~~ 294 (450)
T 2vdu_B 224 ISHYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLSAG-GDDKIFAWDWKTGKNLSTFDYNS--LIKPYLNDQ---HLA 294 (450)
T ss_dssp EEEESCTTC--EEEECCCCSSCEEEEEEC-STTEEEEEE-SSSEEEEEETTTCCEEEEEECHH--HHGGGCCTT---SBC
T ss_pred EEECCCCce--eeeeecCCCCceEEEEEC-CCCEEEEEe-CCCeEEEEECCCCcEeeeecchh--hhhhhhhhc---ccc
Confidence 666653321 111111223457889998 666666555 67899999887654111110000 000000000 000
Q ss_pred EEEEe----eCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec--CCcc--e-EEEEcCCCCCCCcCCCceEEEEeCC
Q psy14257 729 IQLVV----DAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL--EGEY--Q-TTILSNESNDTSTLSKISSIAVWPV 799 (841)
Q Consensus 729 ~~~i~----~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l--~g~~--~-~~~~~~~~~~~~~l~~p~~iavd~~ 799 (841)
...+. ...-..+.+|++.+.++.||.+. ...+.|.++++ .... . ...+.. -..+.+|+++|.
T Consensus 295 ~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~--~~d~~i~iw~~~~~~~~~l~~~~~~~~-------~~~v~~~~~~~~ 365 (450)
T 2vdu_B 295 PPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV--EATKCIIILEMSEKQKGDLALKQIITF-------PYNVISLSAHND 365 (450)
T ss_dssp ----------CBCCCEEEEEECSSSSEEEEEE--TTCSEEEEEEECSSSTTCEEEEEEEEC-------SSCEEEEEEETT
T ss_pred cccccccccccceEEEEEEEEeCCCCEEEEEE--CCCCeEEEEEeccCCCCceeeccEecc-------CCceEEEEecCC
Confidence 00000 01123567888888888999883 35789999999 3221 1 111223 258999999993
Q ss_pred CCeEEEEecC
Q psy14257 800 KGKMFWSNVT 809 (841)
Q Consensus 800 ~g~lyw~d~~ 809 (841)
.+|.+-..
T Consensus 366 --~~~v~~~~ 373 (450)
T 2vdu_B 366 --EFQVTLDN 373 (450)
T ss_dssp --EEEEEECC
T ss_pred --cEEEEEec
Confidence 55555443
No 269
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.15 E-value=0.00039 Score=64.70 Aligned_cols=54 Identities=26% Similarity=0.699 Sum_probs=44.4
Q ss_pred ccCCCCCeEec---------CCCCCCCCCCCCCCCCCccc----ccccccCCCCC--CCcccCCCCcEEecCCCce
Q psy14257 101 DCQDVLRTCIP---------KALVCDGEPACFNGEDEMFC----DEKQCLRSDCH--HDCYNTPEGFMCVCPRDMY 161 (841)
Q Consensus 101 ~C~~~~~~Ci~---------~~~~Cdg~~~C~~g~de~~C----~eC~~~~~~C~--~~C~~~~g~~~C~C~~Gy~ 161 (841)
.|.++ +.|+. .++.| .|+.||.+..| ++|.. .+|. ..|.++.++|+|.|++||.
T Consensus 59 ~C~~~-g~C~~~~~~~~~~~~~~~C----~C~~G~~G~~C~~~i~~C~~--~~C~~~~~C~~~~g~~~C~C~~G~~ 127 (143)
T 4d90_A 59 PCHNG-GTCEISEAYRGDTFIGYVC----KCPRGFNGIHCQHNINECEV--EPCKNGGICTDLVANYSCECPGEFM 127 (143)
T ss_dssp CCCTT-CEEEECCCEETTEECCEEE----ECCTTEESTTSCEECCTTTT--CCSCTTCEEEEETTEEEEECCTTCB
T ss_pred CCCCC-CEecCCCccccCCCCCeEe----ECcCCCcCCCcccCCCcCCC--CCCCCCCEeECCCCCeEeECCCCCc
Confidence 58777 88982 37789 99999988888 67863 4574 4899999999999999997
No 270
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.12 E-value=0.1 Score=61.83 Aligned_cols=245 Identities=9% Similarity=0.047 Sum_probs=141.0
Q ss_pred eecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc-Cc-----CCCceEEEEccCCEEEEEeCCCC----eEEE
Q psy14257 306 WIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK-NI-----QWPSSLVIDYNQDILYWCDSHLN----TVES 375 (841)
Q Consensus 306 ~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~-~~-----~~P~glavD~~~~~lYwaD~~~~----~I~~ 375 (841)
+.++.+|+++.+.+ ...+.|++.+.++...+++... .+ ..-.++++.+++++|.++-...+ .|+.
T Consensus 81 ~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGL-----QNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSS-----CSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCC-----ceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 45666777665432 2234788888765555444322 11 12457889999998877654332 8999
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCccccc--cceEEEEecC---------------CCcEEEEccCCceE--E
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI--GKNLYWVESN---------------LDQIEVAKLSGQFR--R 436 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~--~~~LY~tD~~---------------~~~I~v~~~~G~~~--~ 436 (841)
++++++..........- ...+.|. ++.||++... ..+|++.++.+... +
T Consensus 156 ~d~~tg~~~~~~~~~~~------------~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~ 223 (710)
T 2xdw_A 156 MKVDGAKELPDVLERVK------------FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI 223 (710)
T ss_dssp EETTTTEEEEEEEEEEC------------SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE
T ss_pred EECCCCCCCcccccCcc------------cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce
Confidence 99988765543211110 0123343 4567776533 22488888865431 2
Q ss_pred EEecCC--CCCceeEEEcCCCCeEEEEecCCC--CCeEEEecCCC------C--CcEEEEEecccCCCCCCceeEEEecc
Q psy14257 437 TLIAGD--MESPRAIALDPRFGLLFWTDWDSK--APRIERCSMSG------E--HRSVIVRVDLLTSRGAWPNGLTLDYQ 504 (841)
Q Consensus 437 ~l~~~~--l~~P~giavd~~~g~Ly~td~~~~--~~~I~r~~ldG------~--~~~~i~~~~~~~~~~~~P~glalD~~ 504 (841)
.+.... -....+++++|+.++|+++..... ...|+..++++ . ..+.+.. ... ...-.+++.
T Consensus 224 ~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~------~~~-~~~~~~s~d 296 (710)
T 2xdw_A 224 LCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID------NFE-GEYDYVTNE 296 (710)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC------SSS-SCEEEEEEE
T ss_pred EEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC------CCC-cEEEEEecc
Confidence 222221 123468999999889988865321 46899998874 2 2344432 111 122246667
Q ss_pred CCEEEEEeCC---CCeEEEEEcCCCe---eEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCC--eEEEEeccCCcceEEE
Q psy14257 505 LTRIYWIDAK---SDSIHTVTYDGKD---HHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTN--SVIRANKWNGSDVTLI 575 (841)
Q Consensus 505 ~~~LYw~d~~---~~~I~~~~~dG~~---~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~--~i~~~~~~~g~~~~~i 575 (841)
+++||+.... +.+|..+++++.. .+.+..... -....++++. +++|+++-...+ .|+.++..+|+....+
T Consensus 297 g~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 297 GTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE-KDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF 375 (710)
T ss_dssp TTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS-SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE
T ss_pred CCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC-CCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec
Confidence 8899887543 4589999998764 255554321 1123467777 788888765443 4666665456544333
No 271
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.10 E-value=0.48 Score=51.77 Aligned_cols=274 Identities=14% Similarity=0.052 Sum_probs=146.2
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
.+.++.|.+. +. +..+-..++.|...++..+. . ...+...-.....+++.+.+ + +++ + ...++.
T Consensus 110 ~V~~~~~~p~-~~--~l~s~s~Dg~i~vwd~~~~~--~-~~~l~~h~~~V~~v~~~~~~-~-~l~-s-------gs~D~~ 173 (410)
T 1vyh_C 110 PVTRVIFHPV-FS--VMVSASEDATIKVWDYETGD--F-ERTLKGHTDSVQDISFDHSG-K-LLA-S-------CSADMT 173 (410)
T ss_dssp CEEEEEECSS-SS--EEEEEESSSCEEEEETTTCC--C-CEEECCCSSCEEEEEECTTS-S-EEE-E-------EETTSC
T ss_pred cEEEEEEcCC-CC--EEEEEeCCCeEEEEECCCCc--E-EEEEeccCCcEEEEEEcCCC-C-EEE-E-------EeCCCe
Confidence 4567777664 33 56666677888888776654 1 22233333345567776543 2 222 1 123567
Q ss_pred EEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccc
Q psy14257 330 IEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNL 409 (841)
Q Consensus 330 I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avd 409 (841)
|..+++.+..........-.....+++.+.++.|+- -...+.|...++........+.. ....+ ..+.
T Consensus 174 i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s-~s~D~~i~~wd~~~~~~~~~~~~----h~~~v-------~~~~ 241 (410)
T 1vyh_C 174 IKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVS-ASRDKTIKMWEVQTGYCVKTFTG----HREWV-------RMVR 241 (410)
T ss_dssp CCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTCCEEEEEEC----CSSCE-------EEEE
T ss_pred EEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEE-EeCCCeEEEEECCCCcEEEEEeC----CCccE-------EEEE
Confidence 777777654332222233345567888877666654 44567788888754432222110 00000 0011
Q ss_pred c-ccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCC-------------------CeEEEEecCCCCCe
Q psy14257 410 W-IGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRF-------------------GLLFWTDWDSKAPR 469 (841)
Q Consensus 410 w-~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~-------------------g~Ly~td~~~~~~~ 469 (841)
+ ..+.++++-...+.|.+.++........+.........+++.|.. |.++++-.. .+.
T Consensus 242 ~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~--D~~ 319 (410)
T 1vyh_C 242 PNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSR--DKT 319 (410)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEET--TSE
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeC--CCe
Confidence 1 125667777777889988886554433343344556788888753 334444433 466
Q ss_pred EEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe-eEEEEcCCCCCCcceEEEEec
Q psy14257 470 IERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD-HHVVLSNHDSLTHPFAIALFE 548 (841)
Q Consensus 470 I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~~~l~~P~gla~~~ 548 (841)
|...++.......... ..-....++++++.+..|+ +-...+.|...++.... ..++. .+ -....+|++..
T Consensus 320 i~iwd~~~~~~~~~~~-----~h~~~v~~v~~~~~g~~l~-s~s~D~~i~vwd~~~~~~~~~~~-~h--~~~v~~l~~~~ 390 (410)
T 1vyh_C 320 IKMWDVSTGMCLMTLV-----GHDNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKNKRCMKTLN-AH--EHFVTSLDFHK 390 (410)
T ss_dssp EEEEETTTTEEEEEEE-----CCSSCEEEEEECSSSSCEE-EEETTTEEEEECCTTSCCCEEEE-CC--SSCEEEEEECS
T ss_pred EEEEECCCCceEEEEE-----CCCCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceEEEEc-CC--CCcEEEEEEcC
Confidence 7777765332222222 2334568899987655555 44456788888886543 34443 22 12346677643
Q ss_pred -CeEEEEeCCCCeEE
Q psy14257 549 -NHVYWTDWRTNSVI 562 (841)
Q Consensus 549 -~~lY~td~~~~~i~ 562 (841)
+.+.++-...+.|.
T Consensus 391 ~~~~l~sgs~D~~i~ 405 (410)
T 1vyh_C 391 TAPYVVTGSVDQTVK 405 (410)
T ss_dssp SSSCEEEEETTSEEE
T ss_pred CCCEEEEEeCCCcEE
Confidence 33444444444443
No 272
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.09 E-value=0.39 Score=50.63 Aligned_cols=275 Identities=9% Similarity=-0.014 Sum_probs=144.2
Q ss_pred eEEEEecCCCcEEEEccC--CceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 414 NLYWVESNLDQIEVAKLS--GQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~--G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
++.++-...+.|.+.+++ +......+.........|+++|...+|+.... .+.|...+++......+..
T Consensus 55 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~------ 125 (368)
T 3mmy_A 55 NFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC---DKTAKMWDLSSNQAIQIAQ------ 125 (368)
T ss_dssp EEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEE------
T ss_pred eEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC---CCcEEEEEcCCCCceeecc------
Confidence 555665666788888887 44443334444567889999997667765553 4678777877554444333
Q ss_pred CCCCceeEEE--eccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCC
Q psy14257 492 RGAWPNGLTL--DYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 492 ~~~~P~glal--D~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g 569 (841)
.-.....+++ .+ +++++++-...+.|...++........+... .....+......++.+.. .+.+...+....
T Consensus 126 ~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~ 200 (368)
T 3mmy_A 126 HDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP---ERCYCADVIYPMAVVATA-ERGLIVYQLENQ 200 (368)
T ss_dssp CSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECS---SCEEEEEEETTEEEEEEG-GGCEEEEECSSS
T ss_pred ccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecC---CCceEEEecCCeeEEEeC-CCcEEEEEeccc
Confidence 2345678888 54 4455555555678998887654332222221 234455555565555543 334444443222
Q ss_pred cceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEE
Q psy14257 570 SDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRG 649 (841)
Q Consensus 570 ~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~ 649 (841)
......... +.. ....|.+ +..+... .+..++..+....|+.
T Consensus 201 ~~~~~~~~~---~~~---------------------------~~~~~~~-----~~~~~~~---~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 201 PSEFRRIES---PLK---------------------------HQHRCVA-----IFKDKQN---KPTGFALGSIEGRVAI 242 (368)
T ss_dssp CEEEEECCC---SCS---------------------------SCEEEEE-----EEECTTS---CEEEEEEEETTSEEEE
T ss_pred cchhhhccc---ccc---------------------------CCCceEE-----EcccCCC---CCCeEEEecCCCcEEE
Confidence 211111000 000 0001100 0000000 0011333334455666
Q ss_pred EecCCCCc-cccceeecCC-----------CCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeeccc
Q psy14257 650 VDLEHPYY-HTIPTISIPQ-----------VFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTP 717 (841)
Q Consensus 650 ~~l~~~~~-~~~~~~~~~~-----------~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 717 (841)
.+++.... .....+.... ...+.+++|.|..+.|+... ..+.|+..++....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~--------------- 306 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDART--------------- 306 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTE---------------
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCc---------------
Confidence 66654322 1111111110 01478999999887777665 67889999887644
Q ss_pred ccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEE
Q psy14257 718 LSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVC 767 (841)
Q Consensus 718 ~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~ 767 (841)
....+......+..|++.+.++.|..+.+|.....+++.
T Consensus 307 -----------~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 307 -----------KLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp -----------EEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGC
T ss_pred -----------EEEEecCCCCCceEEEECCCCCeEEEEeccccccccccc
Confidence 222333445678899999988888888543333333333
No 273
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.09 E-value=0.00022 Score=74.84 Aligned_cols=44 Identities=25% Similarity=0.554 Sum_probs=41.1
Q ss_pred cccccc-CCCCCCCcccCCCCcEEecCCCceecCCCCcccccccc
Q psy14257 132 DEKQCL-RSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 132 ~eC~~~-~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
|||... ++.|+|.|.++.++|+|.|++||.|..|+++|...++|
T Consensus 3 ~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 3 NECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred CccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccccccc
Confidence 688877 78999999999999999999999999999999998888
No 274
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.09 E-value=0.4 Score=50.73 Aligned_cols=231 Identities=9% Similarity=0.043 Sum_probs=123.5
Q ss_pred CCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCcc--EEEEeeeeecCCCccccCCC
Q psy14257 326 SDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSER--TVSFNLEVLGSDSRVGIPNC 403 (841)
Q Consensus 326 ~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~--~~~~~~~~~~~~~~~~i~~~ 403 (841)
.++.|..+++............-.....+++.+.++.|.... ..+.|...++..... +...... +....+
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~v~iw~~~~~~~~~~~~~~~~--~h~~~v----- 146 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-LDNICSIYNLKTREGNVRVSRELA--GHTGYL----- 146 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTCSBSCEEEEEEE--CCSSCE-----
T ss_pred CCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEECccCCCcceeEEEec--CCCccE-----
Confidence 345666666543322222222334456788888776665554 457777777754321 1111111 111000
Q ss_pred CCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEE
Q psy14257 404 RPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVI 483 (841)
Q Consensus 404 ~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i 483 (841)
..+.|..+..+++-...+.|.+.++........+.........+++.|...+ +.+-.. .+.|...++........
T Consensus 147 --~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sg~~--d~~v~~wd~~~~~~~~~ 221 (340)
T 1got_B 147 --SCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL-FVSGAC--DASAKLWDVREGMCRQT 221 (340)
T ss_dssp --EEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEET--TSCEEEEETTTCSEEEE
T ss_pred --EEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCE-EEEEeC--CCcEEEEECCCCeeEEE
Confidence 0122222333555566788888888654444334444456789999997554 444433 45666666653333222
Q ss_pred EEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEE
Q psy14257 484 VRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVI 562 (841)
Q Consensus 484 ~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~ 562 (841)
.. ..-...+.+++.+.+..|+ +-...+.|...++....................+++. .+.++.+-...+.|.
T Consensus 222 ~~-----~h~~~v~~v~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 222 FT-----GHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp EC-----CCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred Ec-----CCcCCEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 22 2334568899987655554 4445678999998765443333222112223556663 456666666667777
Q ss_pred EEeccCCcceEEE
Q psy14257 563 RANKWNGSDVTLI 575 (841)
Q Consensus 563 ~~~~~~g~~~~~i 575 (841)
..+..+++....+
T Consensus 296 vwd~~~~~~~~~~ 308 (340)
T 1got_B 296 VWDALKADRAGVL 308 (340)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEEcccCcEeeEe
Confidence 7776655544433
No 275
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.09 E-value=0.035 Score=58.47 Aligned_cols=207 Identities=12% Similarity=0.117 Sum_probs=120.2
Q ss_pred EEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccc
Q psy14257 330 IEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNL 409 (841)
Q Consensus 330 I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avd 409 (841)
|.+.+.+|+.+....... ......+++ ++.||+.. ..+.|.+++.+|..+.... .. ...... ..++
T Consensus 80 l~~~d~~g~~~~~~~~~~-~~~~~~~~~--~~~l~v~t-~~~~l~~~d~~g~~~~~~~-~~---~~~~~~------~~~~ 145 (330)
T 3hxj_A 80 VYAINPDGTEKWRFDTKK-AIVSDFTIF--EDILYVTS-MDGHLYAINTDGTEKWRFK-TK---KAIYAT------PIVS 145 (330)
T ss_dssp EEEECCCGGGGGGSCC------CCEEEE--TTEEEEEC-TTSEEEEECTTSCEEEEEE-CS---SCCCSC------CEEC
T ss_pred EEEECCCCcEEEEEECCC-CcccCceEE--CCEEEEEe-cCCEEEEEcCCCCEEEEEc-CC---Cceeee------eEEc
Confidence 888888776554443221 112344554 67777664 4578888888854322221 10 000000 0111
Q ss_pred cccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEeccc
Q psy14257 410 WIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLL 489 (841)
Q Consensus 410 w~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~ 489 (841)
..++||+.. ..+.|..++.+|+....... .......+++|+ +|.||++. ..|++.+.+|.......
T Consensus 146 -~~g~l~vgt-~~~~l~~~d~~g~~~~~~~~-~~~~~~~~~~d~-~g~l~v~t-----~~l~~~d~~g~~~~~~~----- 211 (330)
T 3hxj_A 146 -EDGTIYVGS-NDNYLYAINPDGTEKWRFKT-NDAITSAASIGK-DGTIYFGS-----DKVYAINPDGTEKWNFY----- 211 (330)
T ss_dssp -TTSCEEEEC-TTSEEEEECTTSCEEEEEEC-SSCCCSCCEECT-TCCEEEES-----SSEEEECTTSCEEEEEC-----
T ss_pred -CCCEEEEEc-CCCEEEEECCCCCEeEEEec-CCCceeeeEEcC-CCEEEEEe-----CEEEEECCCCcEEEEEc-----
Confidence 136777754 34788999988665443322 223456778875 47788876 47888886554332221
Q ss_pred CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccC
Q psy14257 490 TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWN 568 (841)
Q Consensus 490 ~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~ 568 (841)
........+++|. +++||++.. .+.|.+++.+|.....+.... ..+..+.+. ++.||++.. .+.|+++++ +
T Consensus 212 -~~~~~~~~~~~~~-~g~l~v~t~-~~gl~~~~~~g~~~~~~~~~~---~~~~~~~~~~~g~l~v~t~-~ggl~~~d~-~ 283 (330)
T 3hxj_A 212 -AGYWTVTRPAISE-DGTIYVTSL-DGHLYAINPDGTEKWRFKTGK---RIESSPVIGNTDTIYFGSY-DGHLYAINP-D 283 (330)
T ss_dssp -CSSCCCSCCEECT-TSCEEEEET-TTEEEEECTTSCEEEEEECSS---CCCSCCEECTTSCEEEECT-TCEEEEECT-T
T ss_pred -cCCcceeceEECC-CCeEEEEcC-CCeEEEECCCCCEeEEeeCCC---CccccceEcCCCeEEEecC-CCCEEEECC-C
Confidence 1224467888884 578888765 568999988887665554332 123345665 688988865 457888886 5
Q ss_pred Ccce
Q psy14257 569 GSDV 572 (841)
Q Consensus 569 g~~~ 572 (841)
|+..
T Consensus 284 g~~~ 287 (330)
T 3hxj_A 284 GTEK 287 (330)
T ss_dssp SCEE
T ss_pred CcEE
Confidence 5533
No 276
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.08 E-value=0.051 Score=60.06 Aligned_cols=244 Identities=7% Similarity=0.002 Sum_probs=141.1
Q ss_pred CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCC--------ccccc--cccCcCCCceEEEEccCCEEEEE
Q psy14257 297 STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGE--------NRSPL--VTKNIQWPSSLVIDYNQDILYWC 366 (841)
Q Consensus 297 ~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~--------~~~~l--~~~~~~~P~glavD~~~~~lYwa 366 (841)
..+..+++.+.++++++.. ..++.|..+++... ....+ ....-....+|++++.+..++++
T Consensus 129 ~~v~~l~~~p~~~~~lat~---------~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATK---------TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp SCCSEEEEETTEEEEEEEE---------CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred CcEEEEEECCCCCcEEEEE---------CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 3566677765322333322 23457777776531 01111 12234456889999887756666
Q ss_pred eCCCCeEEEEEecCCcc--EEEEeeeee-cCCCccccCCCCCCccccc--cceEEEEecCCCcEEEEccCCc----eEEE
Q psy14257 367 DSHLNTVESVRVDGSER--TVSFNLEVL-GSDSRVGIPNCRPEDNLWI--GKNLYWVESNLDQIEVAKLSGQ----FRRT 437 (841)
Q Consensus 367 D~~~~~I~~~~ldG~~~--~~~~~~~~~-~~~~~~~i~~~~~~avdw~--~~~LY~tD~~~~~I~v~~~~G~----~~~~ 437 (841)
-...+.|...++..... ..+.....+ .... ...++.|. +++++++....+.|.+.++... ....
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-------~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~ 272 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTA-------VVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHT 272 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSS-------CEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEE
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCC-------CEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeE
Confidence 67788899988875221 111111111 0100 01133343 4778888888899999998743 2223
Q ss_pred EecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC-CC-cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCC
Q psy14257 438 LIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG-EH-RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKS 515 (841)
Q Consensus 438 l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG-~~-~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~ 515 (841)
+ ...-..++.|+++|...+++++-.. .+.|...++.. .. ...+ . ..-.....+++.+.+..++.+-...
T Consensus 273 ~-~~~~~~v~~i~~~p~~~~~l~tg~~--dg~v~vwd~~~~~~~~~~~-~-----~h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 273 V-DAHTAEVNCLSFNPYSEFILATGSA--DKTVALWDLRNLKLKLHSF-E-----SHKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp E-ECCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCTTSCSEEE-E-----CCSSCEEEEEECSSCTTEEEEEETT
T ss_pred e-ecCCCCeEEEEeCCCCCCEEEEEeC--CCeEEEEeCCCCCCCeEEe-e-----cCCCCEEEEEECCCCCCEEEEEeCC
Confidence 2 2334568999999987777777654 56788887764 22 3333 2 2344678899998777788887777
Q ss_pred CeEEEEEcCCCee------------EEEEcCCCCCCcceEEEEec-Ce-EEEEeCCCCeEEEEe
Q psy14257 516 DSIHTVTYDGKDH------------HVVLSNHDSLTHPFAIALFE-NH-VYWTDWRTNSVIRAN 565 (841)
Q Consensus 516 ~~I~~~~~dG~~~------------~~i~~~~~~l~~P~gla~~~-~~-lY~td~~~~~i~~~~ 565 (841)
+.|...++..... ..+......-..+..+++.. +. ++++-...+.|...+
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 8888888865110 11221111133577888743 33 676666666655444
No 277
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.98 E-value=0.048 Score=65.15 Aligned_cols=121 Identities=11% Similarity=0.093 Sum_probs=67.0
Q ss_pred ceeEEEcCCCCeE-EEEecCCCCCeEEEecCCCCC-------cEEEEEecccCCCCC--CceeEEEeccCCEEE-EEeC-
Q psy14257 446 PRAIALDPRFGLL-FWTDWDSKAPRIERCSMSGEH-------RSVIVRVDLLTSRGA--WPNGLTLDYQLTRIY-WIDA- 513 (841)
Q Consensus 446 P~giavd~~~g~L-y~td~~~~~~~I~r~~ldG~~-------~~~i~~~~~~~~~~~--~P~glalD~~~~~LY-w~d~- 513 (841)
...++..|++..+ ++.........|+..++++.. ...+..... ..-+. .+..+++.++++.|+ |.-.
T Consensus 262 ~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~-~~~v~~~~~~~p~fspDG~~l~~~~s~~ 340 (740)
T 4a5s_A 262 LCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST-TGWVGRFRPSEPHFTLDGNSFYKIISNE 340 (740)
T ss_dssp EEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS-SSCSSSSSCCCCEECTTSSEEEEEEECT
T ss_pred EEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC-CceEccCcCCCceEcCCCCEEEEEEEcC
Confidence 4567788875533 344433223468888876544 222222100 01111 144677887777776 6632
Q ss_pred -CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCC------CCeEEEEeccCC
Q psy14257 514 -KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWR------TNSVIRANKWNG 569 (841)
Q Consensus 514 -~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~------~~~i~~~~~~~g 569 (841)
+...|+.++++|...+.+..+......+. .+.+++||++... ...|++++..++
T Consensus 341 ~G~~~l~~~~~~~~~~~~lT~g~~~v~~~~--~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 341 EGYRHICYFQIDKKDCTFITKGTWEVIGIE--ALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp TSCEEEEEEETTCSSCEESCCSSSCEEEEE--EECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred CCceEEEEEECCCCceEecccCCEEEEEEE--EEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 34589999999987766554321122222 2457889988754 246777775443
No 278
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.96 E-value=0.5 Score=55.77 Aligned_cols=152 Identities=9% Similarity=0.028 Sum_probs=89.3
Q ss_pred CeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECC---CCeEEEEEcccCceeeeeeeeeeeeccccccc
Q psy14257 645 REIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQE---YNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKR 721 (841)
Q Consensus 645 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~---~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 721 (841)
+.|+.++++.+..... .+.. ........ +++..+.+|+.... +.+|+++++++...+
T Consensus 259 ~~i~~~d~~~~~~~~~-~l~~-~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~----------------- 318 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLL-TVQG-DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA----------------- 318 (693)
T ss_dssp CEEEEEETTSTTCCCE-EEEC-SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-----------------
T ss_pred cEEEEEECCCCCCceE-EEeC-CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-----------------
Confidence 4778888765532211 1111 11111222 56667888887533 468999988765410
Q ss_pred ccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEc-CCCCCCCcCCCceEEEEeCCC
Q psy14257 722 SSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILS-NESNDTSTLSKISSIAVWPVK 800 (841)
Q Consensus 722 ~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~-~~~~~~~~l~~p~~iavd~~~ 800 (841)
+.+.++...-. .. .+++.++.|+++..+....+|.+.+++|...+.+.- . .....+++.++..
T Consensus 319 ------~~~~l~~~~~~-~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~-------~~~~~~~~~~~d~ 382 (693)
T 3iuj_A 319 ------HWRDLIPERQQ-VL--TVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPG-------LGSVSGFNGKHDD 382 (693)
T ss_dssp ------GCEEEECCCSS-CE--EEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSS-------SSEEEECCCCTTC
T ss_pred ------ccEEEecCCCC-EE--EEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCC-------CceEEeeecCCCC
Confidence 01344443222 22 677779999888544455689999999876554432 2 2234455566677
Q ss_pred CeEEEEecC-CCcceEEEEecCCCceEEEecCC
Q psy14257 801 GKMFWSNVT-KQVVTIEMAFMDGTKRETVVSQK 832 (841)
Q Consensus 801 g~lyw~d~~-~~~~~I~~~~~dG~~~~~l~~~~ 832 (841)
..|+.+-.. ..+++|.+.++++...++|....
T Consensus 383 ~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~~~ 415 (693)
T 3iuj_A 383 PALYFGFENYAQPPTLYRFEPKSGAISLYRASA 415 (693)
T ss_dssp SCEEEEEECSSSCCEEEEECTTTCCEEEEECCC
T ss_pred CEEEEEecCCCCCCEEEEEECCCCeEEEEEeCC
Confidence 777776543 23368999999887777766543
No 279
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.87 E-value=0.51 Score=50.62 Aligned_cols=273 Identities=10% Similarity=-0.026 Sum_probs=139.2
Q ss_pred cccccccccccc-------EEEEeccccceeeeccccc---CC---cceeEEEecCCCeEEEEEecCCcccce--EEEEe
Q psy14257 229 HELRGVDLRTFN-------VIALISSLKNTIALDFYYT---PT---ANMVFWTDVIDDKIYNATLIGNSLSNI--DVVVQ 293 (841)
Q Consensus 229 ~~I~~~~~~~~~-------~~~l~~~~~~~~avd~~~~---~~---~~~lyw~d~~~~~I~~~~~~~~~~~~~--~~~~~ 293 (841)
..|+..++.... ...+......+.++.|... .+ . ++++-...+.|...++..+..... ...+.
T Consensus 36 g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~--~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~ 113 (397)
T 1sq9_A 36 GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC--LVATTSFSGDLLFYRITREDETKKVIFEKLD 113 (397)
T ss_dssp SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEE--EEEEEETTSCEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCcccc--EEEEEcCCCCEEEEEccCCcccccccceeec
Confidence 445555554433 3344333344677777765 12 3 455555678888887765541000 11222
Q ss_pred CC-----CCCccceEEe----eecCceeEEEeeecCCCCCCCCCCEEEEccCC-------Cccc-----ccc------cc
Q psy14257 294 TG-----LSTAEGLAVD----WIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHG-------ENRS-----PLV------TK 346 (841)
Q Consensus 294 ~~-----l~~p~giavD----~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG-------~~~~-----~l~------~~ 346 (841)
.. -.....+++. +.++.. ++.. ..++.|..+++.. +... .+. ..
T Consensus 114 ~~~~~~~~~~v~~~~~~~~~~~~~~~~-l~~~--------~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (397)
T 1sq9_A 114 LLDSDMKKHSFWALKWGASNDRLLSHR-LVAT--------DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMT 184 (397)
T ss_dssp CSCTTGGGSCEEEEEEECCC----CEE-EEEE--------ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSS
T ss_pred ccccccCCCcEEEEEEeeccCCCCceE-EEEE--------eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccC
Confidence 11 1455667776 544320 2222 1346788877654 3332 221 22
Q ss_pred CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEee---eeecCCCccccCCCCCCccccc-cceEEEEecCC
Q psy14257 347 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNL---EVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESNL 422 (841)
Q Consensus 347 ~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~---~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~ 422 (841)
.-.....+++.+.+ ++++-...+.|...++........+.. ........ ..+.|. .++++++-...
T Consensus 185 ~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i--------~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 185 PSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI--------RSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp SCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCE--------EEEEECSSTTEEEEEEEE
T ss_pred CCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCcc--------ceEEECCCCCEEEEEecC
Confidence 34567889998876 666667788899988875433322221 00000000 112221 14445554455
Q ss_pred ---CcEEEEccCC-ceEEEEecC------------CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 423 ---DQIEVAKLSG-QFRRTLIAG------------DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 423 ---~~I~v~~~~G-~~~~~l~~~------------~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
+.|.+.++.. +....+... .-.....++++|...+|+.... .+.|...++........+..
T Consensus 255 ~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---dg~i~iwd~~~~~~~~~~~~ 331 (397)
T 1sq9_A 255 NSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW---DGKLRFWDVKTKERITTLNM 331 (397)
T ss_dssp TTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEEC
T ss_pred CCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC---CCeEEEEEcCCCceeEEEec
Confidence 7899999864 444443320 3356789999998776665553 46777777754332222220
Q ss_pred cccC-CC---------------CCCceeEEEeccCC---------EEEEEeCCCCeEEEEEcCC
Q psy14257 487 DLLT-SR---------------GAWPNGLTLDYQLT---------RIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 487 ~~~~-~~---------------~~~P~glalD~~~~---------~LYw~d~~~~~I~~~~~dG 525 (841)
.... .. -.....+++.+.+. +++++-...+.|...++++
T Consensus 332 ~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 332 HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp CGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred ccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 0000 01 34467888886542 3444444466777666543
No 280
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.86 E-value=0.13 Score=60.78 Aligned_cols=269 Identities=7% Similarity=-0.022 Sum_probs=136.6
Q ss_pred cCccccccccccccEEEEeccccc----eeeecccccCCcceeEEEec--------CCCeEEEEEecCCcccceEEEEeC
Q psy14257 227 NRHELRGVDLRTFNVIALISSLKN----TIALDFYYTPTANMVFWTDV--------IDDKIYNATLIGNSLSNIDVVVQT 294 (841)
Q Consensus 227 ~~~~I~~~~~~~~~~~~l~~~~~~----~~avd~~~~~~~~~lyw~d~--------~~~~I~~~~~~~~~~~~~~~~~~~ 294 (841)
....|+..++.+.....+...... +..+.|..+.+. |.++.. ..+.|+..+++++....... +.
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~--la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~-l~- 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQF--VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE-LP- 109 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSE--EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC-CC-
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCe--EEEEecCceeEEeecceEEEEEECCCCcccccee-cC-
Confidence 355677777777766666553222 556677665433 555432 14678888887664200011 11
Q ss_pred CCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccC------------------cCCCceEEE
Q psy14257 295 GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKN------------------IQWPSSLVI 356 (841)
Q Consensus 295 ~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~------------------~~~P~glav 356 (841)
.....+++.|.++.+.+. . ++.|+..++++...+.+.... +....++++
T Consensus 110 --~~~~~~~~SPDG~~la~~-~----------~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 110 --RPIQYLCWSPVGSKLAYV-Y----------QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp --SSBCCEEECSSTTCEEEE-E----------TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred --cccccceECCCCCEEEEE-E----------CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 234557777766544432 1 236777777654444332211 133368999
Q ss_pred EccCCEEEEEeCCC---C------------------------------eEEEEEecCCccE---EEEeeeee-cCCCccc
Q psy14257 357 DYNQDILYWCDSHL---N------------------------------TVESVRVDGSERT---VSFNLEVL-GSDSRVG 399 (841)
Q Consensus 357 D~~~~~lYwaD~~~---~------------------------------~I~~~~ldG~~~~---~~~~~~~~-~~~~~~~ 399 (841)
.+++++|+++.... . .|+.+++++.... .+.....+ .....
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY-- 254 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE--
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce--
Confidence 99999998864321 1 4555555554321 11000000 00000
Q ss_pred cCCCCCCcccccc-ceEEEE--ecC--CCcEEEEc----cCCceEEEEe----cCC---CC--CceeEEEcCCCCeEEEE
Q psy14257 400 IPNCRPEDNLWIG-KNLYWV--ESN--LDQIEVAK----LSGQFRRTLI----AGD---ME--SPRAIALDPRFGLLFWT 461 (841)
Q Consensus 400 i~~~~~~avdw~~-~~LY~t--D~~--~~~I~v~~----~~G~~~~~l~----~~~---l~--~P~giavd~~~g~Ly~t 461 (841)
...+.|.. ++++++ +.. ...|.+.+ +++...+.+. ... +. .+..+++.|++..||+.
T Consensus 255 -----~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 255 -----FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp -----EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred -----EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 00122211 445444 222 23577777 5544333222 111 11 11267888887777663
Q ss_pred -ecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC------CCeEEEEEcCCC
Q psy14257 462 -DWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK------SDSIHTVTYDGK 526 (841)
Q Consensus 462 -d~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~------~~~I~~~~~dG~ 526 (841)
.......+|+..++++...+.+.. .. ....++..- .+++||++... ...|+.+++++.
T Consensus 330 ~~~~~g~~~l~~~~~~~~~~~~lt~-----~~-~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 330 FSDKDGYKHIHYIKDTVENAIQITS-----GK-WEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EECTTSCEEEEEESSCSTTCEECSC-----SS-SCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEccCCceEEEEEECCCCceEeccc-----Cc-eEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 322235689999998776544432 11 112344444 67889888754 347888888654
No 281
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.85 E-value=0.088 Score=56.36 Aligned_cols=242 Identities=7% Similarity=-0.042 Sum_probs=132.4
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccc-eEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSN-IDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~-~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
+.++.|... + .+.+-...+.|...++..+.... .+......-.....+++.+.++ +++ + ...++.
T Consensus 85 v~~~~~s~d-~---~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~--~l~-s-------gs~d~~ 150 (344)
T 4gqb_B 85 VADLTWVGE-R---GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT--QAV-S-------GSKDIC 150 (344)
T ss_dssp EEEEEEETT-T---EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS--EEE-E-------EETTSC
T ss_pred EEEEEEeCC-C---eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC--EEE-E-------EeCCCe
Confidence 556777664 2 33455667888888776654111 1111222223455677766442 222 1 224567
Q ss_pred EEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccc
Q psy14257 330 IEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNL 409 (841)
Q Consensus 330 I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avd 409 (841)
|..+++............-.....+++.+.+..++.+-...++|+..++........+....... ...++.
T Consensus 151 i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~---------~~~~~~ 221 (344)
T 4gqb_B 151 IKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGY---------LPTSLA 221 (344)
T ss_dssp EEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CC---------CEEEEE
T ss_pred EEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeec---------cceeee
Confidence 88888764332222222334556788888887788887778888888876543332211100000 001122
Q ss_pred c--ccceEEEEecCCCcEEEEccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 410 W--IGKNLYWVESNLDQIEVAKLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 410 w--~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
| .+++++++-...+.|.+.++.. +...++ .........|++.|....+..+-.. .+.|...++.... .+...
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~-~~h~~~v~~v~fsp~g~~~lasgs~--D~~i~vwd~~~~~--~~~~~ 296 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLSS-AVHSQCVTGLVFSPHSVPFLASLSE--DCSLAVLDSSLSE--LFRSQ 296 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEEE-ECCSSCEEEEEECSSSSCCEEEEET--TSCEEEECTTCCE--EEEEC
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEEE-cCCCCCEEEEEEccCCCeEEEEEeC--CCeEEEEECCCCc--EEEEc
Confidence 2 2467777777778899998864 333343 3334566899999986555444433 4566666665432 22210
Q ss_pred cccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 487 DLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 487 ~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
..-....+|++.+.+.+|+.+-...+.|..-+++
T Consensus 297 ----~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 297 ----AHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp ----CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred ----CCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 2234567888887777776655445556555544
No 282
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=96.85 E-value=0.16 Score=54.59 Aligned_cols=236 Identities=9% Similarity=-0.031 Sum_probs=119.5
Q ss_pred cccccceEEEEecCCCcEEEEccCCceEE----EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEE
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSGQFRR----TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVI 483 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G~~~~----~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i 483 (841)
+.|..+.-+++-...+.|.+.++...... ......-.....|++.|...+|..... .+.|...++........
T Consensus 100 ~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~---dg~v~iwd~~~~~~~~~ 176 (357)
T 4g56_B 100 VAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK---DFSVKVWDLSQKAVLKS 176 (357)
T ss_dssp EEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEET---TSCEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEE
Confidence 33433333444455678888776533211 111122345688999998666655543 35666666653322222
Q ss_pred EEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeE
Q psy14257 484 VRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSV 561 (841)
Q Consensus 484 ~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i 561 (841)
.. ..-...+.+++.+.+..++.+-...+.|...++..............-..+..+++. ++.++.+-...+.|
T Consensus 177 ~~-----~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i 251 (357)
T 4g56_B 177 YN-----AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV 251 (357)
T ss_dssp EC-----CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred Ec-----CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccce
Confidence 22 233456788888766667777666778888887643322221111112235667764 35666665556677
Q ss_pred EEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeee--CCCCceeecCCCcccccCceeE
Q psy14257 562 IRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQ--CPHVMKLMSDNKTCQVADSQFI 639 (841)
Q Consensus 562 ~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~--Cp~g~~l~~d~~tC~~~~~~~l 639 (841)
...+..+++....+.... ...++. .|++ ..+|
T Consensus 252 ~~wd~~~~~~~~~~~~~~--------------------------------~~v~~l~~sp~~--------------~~~l 285 (357)
T 4g56_B 252 SLVNIKNPDSAQTSAVHS--------------------------------QNITGLAYSYHS--------------SPFL 285 (357)
T ss_dssp EEEESSCGGGCEEECCCS--------------------------------SCEEEEEECSSS--------------SCCE
T ss_pred eEEECCCCcEeEEEeccc--------------------------------eeEEEEEEcCCC--------------CCEE
Confidence 777765555443322110 001111 1111 1233
Q ss_pred Eee-cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccC
Q psy14257 640 IFS-RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGG 701 (841)
Q Consensus 640 ~~~-~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~ 701 (841)
+.+ ....|+..+++... . ...+.-...+.+|+|.|..+.++.+-...++|+..++...
T Consensus 286 asgs~D~~i~iwd~~~~~--~--~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 286 ASISEDCTVAVLDADFSE--V--FRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEEETTSCEEEECTTSCE--E--EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EEEeCCCEEEEEECCCCc--E--eEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 332 23445555554321 1 1112223457899999976666666667889998887543
No 283
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.85 E-value=0.32 Score=51.18 Aligned_cols=255 Identities=8% Similarity=-0.043 Sum_probs=123.6
Q ss_pred ceeeecccccCCcceeEEEecC---CCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecC-ceeEEEeeecCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVI---DDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGK-NLYMFWAFWSLSPSNS 325 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~---~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~-~~y~~~td~~~~~~~~ 325 (841)
.+.++.|...... +..+-.. .+.|...++.++.. ........-.....+++.+... .-+++.. .
T Consensus 20 ~v~~~~~~p~~~~--l~~~~s~~~~d~~v~iw~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~--------~ 87 (357)
T 3i2n_A 20 TVFDCKWVPCSAK--FVTMGNFARGTGVIQLYEIQHGDL--KLLREIEKAKPIKCGTFGATSLQQRYLATG--------D 87 (357)
T ss_dssp CEEEEEECTTSSE--EEEEEC--CCCEEEEEEEECSSSE--EEEEEEEESSCEEEEECTTCCTTTCCEEEE--------E
T ss_pred ceEEEEEcCCCce--EEEecCccCCCcEEEEEeCCCCcc--cceeeecccCcEEEEEEcCCCCCCceEEEe--------c
Confidence 3567777665333 5444433 67777777765541 1111111122344455554310 1222211 2
Q ss_pred CCCCEEEEccCCCc-cccccccCcCCCceEE------EEccCCEEEEEeCCCCeEEEEEecCCc-cEEEEeeeeec-CCC
Q psy14257 326 SDGGIEKAGMHGEN-RSPLVTKNIQWPSSLV------IDYNQDILYWCDSHLNTVESVRVDGSE-RTVSFNLEVLG-SDS 396 (841)
Q Consensus 326 ~~~~I~~~~~dG~~-~~~l~~~~~~~P~gla------vD~~~~~lYwaD~~~~~I~~~~ldG~~-~~~~~~~~~~~-~~~ 396 (841)
.++.|..+++.... ........-.....++ +.+.+..|+ +-...+.|...++.... ....+...... ...
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~-~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIV-TGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEE-EEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEE-EEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 35678888876543 2222222223333443 334444554 44456778888776543 22211110000 000
Q ss_pred ccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcC---CCCeEEEEecCCCCCeEEEe
Q psy14257 397 RVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDP---RFGLLFWTDWDSKAPRIERC 473 (841)
Q Consensus 397 ~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~---~~g~Ly~td~~~~~~~I~r~ 473 (841)
...+.. ..++. ..++++++-...+.|.+.++.......... .......++++| ...+|+.... .+.|...
T Consensus 167 v~~~~~--~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~---dg~i~i~ 239 (357)
T 3i2n_A 167 CWTVAF--GNAYN-QEERVVCAGYDNGDIKLFDLRNMALRWETN-IKNGVCSLEFDRKDISMNKLVATSL---EGKFHVF 239 (357)
T ss_dssp EEEEEE--ECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEESCSSSSCCEEEEEES---TTEEEEE
T ss_pred eEEEEE--EeccC-CCCCEEEEEccCCeEEEEECccCceeeecC-CCCceEEEEcCCCCCCCCEEEEECC---CCeEEEE
Confidence 000000 00011 125555666667899999988765543332 335678999998 6666665543 4566666
Q ss_pred cCCCC-CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 474 SMSGE-HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 474 ~ldG~-~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
++... ....+.... ....-.....+++.+.+..++++-...+.|...++..
T Consensus 240 d~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 291 (357)
T 3i2n_A 240 DMRTQHPTKGFASVS-EKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEY 291 (357)
T ss_dssp EEEEEETTTEEEEEE-EECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEEC
T ss_pred eCcCCCcccceeeec-cCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCC
Confidence 65422 111111000 0023345678999876554666666677888887753
No 284
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.83 E-value=1.4 Score=52.79 Aligned_cols=310 Identities=9% Similarity=0.035 Sum_probs=143.5
Q ss_pred eccCccccccccccccEEEEeccc--cc-eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEE-eCCCCCcc
Q psy14257 225 FSNRHELRGVDLRTFNVIALISSL--KN-TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVV-QTGLSTAE 300 (841)
Q Consensus 225 ~s~~~~I~~~~~~~~~~~~l~~~~--~~-~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~-~~~l~~p~ 300 (841)
++...+|++++.....+..+.... .. +.++-.+.. +. ||+ -+..+.|++.+..++.+ +.+. ........
T Consensus 146 i~t~~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~--lwi-gt~~~Gl~~~~~~~~~~---~~~~~~~~~~~i~ 218 (795)
T 4a2l_A 146 ISTPEGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQG-DQ--IYI-GTSTDGLYTYSITQKTF---EKVIPILGTKQIQ 218 (795)
T ss_dssp EEETTEEEEEETTTTEEECSSSCHHHHTCCEEEEEEET-TE--EEE-EESSSCEEEEETTTCCE---EECC----CCCEE
T ss_pred EEECCceEEEECCCCEEEeccCCCCCCcceEEEEECCC-CC--EEE-EECCCCEEEEeCCCCeE---EEecCCCCCCeeE
Confidence 333456666665544333222111 11 333333322 33 554 34444588877654431 1110 00112344
Q ss_pred ceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc-------CcCCCceEEEEccCCEEEEEeCCCCeE
Q psy14257 301 GLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK-------NIQWPSSLVIDYNQDILYWCDSHLNTV 373 (841)
Q Consensus 301 giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~-------~~~~P~glavD~~~~~lYwaD~~~~~I 373 (841)
.|..|.. +++++ -|. .+.|.+.+......+.+... .-.....|+.|. .+.|++.... .|
T Consensus 219 ~i~~d~~-g~lwi-gt~---------~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~--Gl 284 (795)
T 4a2l_A 219 AILQQSP-TRIWV-ATE---------GAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLWIGTFN--DL 284 (795)
T ss_dssp EEEEEET-TEEEE-EEB---------SSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEEEEESS--CE
T ss_pred EEEEcCC-CCEEE-EEC---------CCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEEEEeCC--hh
Confidence 5666643 23333 121 23577777665433332211 112234566664 4556655432 57
Q ss_pred EEEEecCCccEEEEeeeeecCCCccccCCCCC--CccccccceEEEEecCCCcEEEEccCCceEEEEec----CCC--CC
Q psy14257 374 ESVRVDGSERTVSFNLEVLGSDSRVGIPNCRP--EDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA----GDM--ES 445 (841)
Q Consensus 374 ~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~--~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~----~~l--~~ 445 (841)
.+++......+.+.... ....+++.... +..| ..++|++.. ..+-|.+++......+.+.. ..+ ..
T Consensus 285 ~~~~~~~~~~~~~~~~~----~~~~~l~~~~i~~i~~D-~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~ 358 (795)
T 4a2l_A 285 NIYHEGTDSFASYSSNP----VENGSLSQRSVRSIFMD-SQGGMWLGT-YFGGLNYYHPIRNRFKNIRNIPYKNSLSDNV 358 (795)
T ss_dssp EEEETTTTEEEEECCCT----TSTTSCSSSCEEEEEEC-TTSCEEEEE-SSSCEEEECGGGGSSEEECCCTTSSSCSCSS
T ss_pred heEcCCCCeEEEEecCC----CCCCCCCCCcEEEEEEe-CCcCEEEEE-CCCCeEEeCCCcccceEEcCCCCCCCCCCCe
Confidence 77776554333221100 00001111000 0011 114554433 23456666554332222221 112 34
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEeccc---CCCCCCceeEEEeccCCE-EEEEeCCCCeEEEE
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLL---TSRGAWPNGLTLDYQLTR-IYWIDAKSDSIHTV 521 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~---~~~~~~P~glalD~~~~~-LYw~d~~~~~I~~~ 521 (841)
.++|+.|.. |.|++...+ ..|.+.+......+.+...... .........|+.|. .++ ||+. ...+.|.++
T Consensus 359 V~~i~~d~~-g~lWiGt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~~lWig-t~~~Gl~~~ 432 (795)
T 4a2l_A 359 VSCIVEDKD-KNLWIGTND---GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDE-KKSLVYIG-THAGGLSIL 432 (795)
T ss_dssp EEEEEECTT-SCEEEEESS---SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEET-TTTEEEEE-ETTTEEEEE
T ss_pred eEEEEECCC-CCEEEEECC---CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcC-CCCEEEEE-eCcCceeEE
Confidence 578888864 778776543 4688888765433333210000 00123456788884 567 5554 445679999
Q ss_pred EcCCCeeEEEEcCCCCC--CcceEEEEe-cCeEEEEeCCCCeEEEEeccCC
Q psy14257 522 TYDGKDHHVVLSNHDSL--THPFAIALF-ENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 522 ~~dG~~~~~i~~~~~~l--~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g 569 (841)
+..+...+.+......+ ...+.|... ++.||++-. +.+.+.++.++
T Consensus 433 d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~ 481 (795)
T 4a2l_A 433 HRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQR 481 (795)
T ss_dssp ETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTT
T ss_pred eCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCC
Confidence 98866555543211112 234566664 478888875 56888887654
No 285
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.80 E-value=0.099 Score=55.37 Aligned_cols=166 Identities=7% Similarity=-0.000 Sum_probs=99.1
Q ss_pred CCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCC----CCeEEEEEecCCccEEEEeeeeecCCCccccCC
Q psy14257 327 DGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPN 402 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~----~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~ 402 (841)
.+.|+.+++++...+.+ .....+++.+++++|+++... ...|+.++++++..+.+.......
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~--------- 107 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIR--------- 107 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEE---------
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCcc---------
Confidence 34688888877655544 456778999999998887643 345889999887766554332110
Q ss_pred CCCCcccc--ccceEEEEecC--------------------------CCcEEEEccCCceE-EEEecCCCCCceeEEEcC
Q psy14257 403 CRPEDNLW--IGKNLYWVESN--------------------------LDQIEVAKLSGQFR-RTLIAGDMESPRAIALDP 453 (841)
Q Consensus 403 ~~~~avdw--~~~~LY~tD~~--------------------------~~~I~v~~~~G~~~-~~l~~~~l~~P~giavd~ 453 (841)
.+.| .++.|+++... ...|++.++++... +.+.. . ....+++.|
T Consensus 108 ----~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~sp 180 (347)
T 2gop_A 108 ----SLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHR 180 (347)
T ss_dssp ----EEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEET
T ss_pred ----ceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCC
Confidence 1122 23556665321 35788888876655 44443 2 677889998
Q ss_pred CCCeEEEEecCCC------CCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC-------CCeEEE
Q psy14257 454 RFGLLFWTDWDSK------APRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK-------SDSIHT 520 (841)
Q Consensus 454 ~~g~Ly~td~~~~------~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~-------~~~I~~ 520 (841)
.. .+|.+..... ...|+..+ .|. .+.+.. . .... .+.+.+++|+++... ...|+.
T Consensus 181 dg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~-----~--~~~~--~~spdg~~l~~~~~~~~~~~~~~~~l~~ 248 (347)
T 2gop_A 181 DK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFE-----K--VSFY--AVDSDGERILLYGKPEKKYMSEHNKLYI 248 (347)
T ss_dssp TE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEE-----E--ESEE--EEEECSSCEEEEECCSSSCCCSSCEEEE
T ss_pred Ce-EEEEEecccccccccccccEEEeC-CCc-eEEecc-----C--ccee--eECCCCCEEEEEEccccCCccccceEEE
Confidence 75 6665544311 34788888 433 333333 1 1112 236667778776532 357888
Q ss_pred EEcCCC
Q psy14257 521 VTYDGK 526 (841)
Q Consensus 521 ~~~dG~ 526 (841)
++ .|.
T Consensus 249 ~d-~~~ 253 (347)
T 2gop_A 249 YD-GKE 253 (347)
T ss_dssp EC-SSC
T ss_pred EC-CCc
Confidence 88 444
No 286
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.80 E-value=0.0042 Score=70.04 Aligned_cols=130 Identities=16% Similarity=0.154 Sum_probs=77.6
Q ss_pred CCCCCccceEEeeecCceeEEEeeecCCCC------------CCCCCCEEEEccCCCccc------c-cc----------
Q psy14257 294 TGLSTAEGLAVDWIGKNLYMFWAFWSLSPS------------NSSDGGIEKAGMHGENRS------P-LV---------- 344 (841)
Q Consensus 294 ~~l~~p~giavD~~~~~~y~~~td~~~~~~------------~~~~~~I~~~~~dG~~~~------~-l~---------- 344 (841)
+.+..||++++++..+.+|+.-|+...... ....|.|+|...++.... . ++
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 345689999999988899999887543210 123578999887653211 1 11
Q ss_pred -----------ccCcCCCceEEEEccCCEEEE-EeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc
Q psy14257 345 -----------TKNIQWPSSLVIDYNQDILYW-CDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG 412 (841)
Q Consensus 345 -----------~~~~~~P~glavD~~~~~lYw-aD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~ 412 (841)
...|..|++|++|.. +.||+ +|...+ .+|.. .+ .-+
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~-G~LWf~TD~~~~------~~g~~---------------~~----------~gn 508 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKA-GRLWILTDGDSS------NAGDF---------------AG----------MGN 508 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTT-CCEEEEECCCCC------CSGGG---------------TT----------CCS
T ss_pred ccccCccCccccCccCCCCceEECCC-CCEEEEeCCCcC------ccccc---------------cc----------cCC
Confidence 014778889999875 56777 775421 00000 00 001
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWD 464 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~ 464 (841)
..||..+... |+..+.+.......|.||++.|+...||++-..
T Consensus 509 n~v~~~dp~t---------Gel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 509 NQMLCADPAT---------GEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp CEEEEECTTT---------CCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred ceEEEEeCCC---------CeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 3444444433 333333322234679999999999999999865
No 287
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.78 E-value=0.33 Score=51.19 Aligned_cols=99 Identities=11% Similarity=0.134 Sum_probs=67.3
Q ss_pred CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCC--CCCeEEEecCCCCCcEEEEEecccCCCCCCceeE
Q psy14257 422 LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDS--KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGL 499 (841)
Q Consensus 422 ~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~--~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~gl 499 (841)
...|++.++++...+.+ .....+++.|++.+|+++.... ....|+..++++.....+... . . ...+
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-----~-~-~~~~ 109 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-----K-N-IRSL 109 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-----S-E-EEEE
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-----C-C-ccce
Confidence 34677777776555444 3567889999988888876431 245699999987665555542 1 1 6788
Q ss_pred EEeccCCEEEEEeCC--------------------------CCeEEEEEcCCCee-EEEE
Q psy14257 500 TLDYQLTRIYWIDAK--------------------------SDSIHTVTYDGKDH-HVVL 532 (841)
Q Consensus 500 alD~~~~~LYw~d~~--------------------------~~~I~~~~~dG~~~-~~i~ 532 (841)
++.+.+++|+++... ...|+.+++++... +.+.
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~ 169 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE 169 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec
Confidence 898888888887421 35788888887765 4443
No 288
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.78 E-value=0.00047 Score=66.29 Aligned_cols=41 Identities=37% Similarity=0.681 Sum_probs=36.0
Q ss_pred ccccccCCC---CCCCcccCCCCcEEecCCCceecCCCCccccc
Q psy14257 132 DEKQCLRSD---CHHDCYNTPEGFMCVCPRDMYLQPDLITCSYL 172 (841)
Q Consensus 132 ~eC~~~~~~---C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~ 172 (841)
+||...++. |++.|.|++|+|.|.|++||.|..|+++|+++
T Consensus 125 ~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 125 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred CcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 788765544 99999999999999999999999999999764
No 289
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.76 E-value=0.71 Score=48.53 Aligned_cols=164 Identities=11% Similarity=0.014 Sum_probs=88.8
Q ss_pred CCceEEEEcc---CCEEEEEeCCCCeEEEEEecCC-ccEEEEeeeeecCCCccccCCCCCCcccccc-----ceEEEEec
Q psy14257 350 WPSSLVIDYN---QDILYWCDSHLNTVESVRVDGS-ERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG-----KNLYWVES 420 (841)
Q Consensus 350 ~P~glavD~~---~~~lYwaD~~~~~I~~~~ldG~-~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~-----~~LY~tD~ 420 (841)
...+|++.+. ++.++++-...+.|...++... ....+........... ..++.|.. +.++++-.
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADEN-------FYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCC-------EEEEEEEECTTTCCEEEEEEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCc-------EEEEEeccCCCCCCCEEEEec
Confidence 3456777753 3444444444457888887633 3333221110000000 01222321 35666666
Q ss_pred CCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEE
Q psy14257 421 NLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLT 500 (841)
Q Consensus 421 ~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~gla 500 (841)
..+.|.+.++........+.........|+++|.++.++.+-.. .+.|...++.......... .....-.....++
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~--~~~~~~~~v~~~~ 168 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK--DHALRLWNIQTDTLVAIFG--GVEGHRDEVLSAD 168 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET--TSCEEEEETTTTEEEEEEC--STTSCSSCEEEEE
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC--CCeEEEEEeecCeEEEEec--ccccccCceeEEE
Confidence 77899999987443333333445678899999944544444433 4677777776433322221 0002344678899
Q ss_pred EeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 501 LDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 501 lD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
+++.+..|+.+. ..+.|...++..
T Consensus 169 ~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 169 YDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp ECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred ECCCCCEEEEec-CCCCEEEEECCC
Confidence 987666666554 467888888764
No 290
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.76 E-value=0.85 Score=49.35 Aligned_cols=286 Identities=10% Similarity=0.016 Sum_probs=141.4
Q ss_pred EEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC-Cee
Q psy14257 450 ALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG-KDH 528 (841)
Q Consensus 450 avd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG-~~~ 528 (841)
++.+...+|.... . .+.|...++.......... ..-.....+++.+.+..|+.+ ...+.|...++.. ...
T Consensus 104 ~~~~~~~~l~~~~-~--dg~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~ 174 (420)
T 3vl1_A 104 TAKLQMRRFILGT-T--EGDIKVLDSNFNLQREIDQ-----AHVSEITKLKFFPSGEALISS-SQDMQLKIWSVKDGSNP 174 (420)
T ss_dssp EECSSSCEEEEEE-T--TSCEEEECTTSCEEEEETT-----SSSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCCC
T ss_pred EEecCCCEEEEEE-C--CCCEEEEeCCCcceeeecc-----cccCccEEEEECCCCCEEEEE-eCCCeEEEEeCCCCcCc
Confidence 3444444444433 2 4566666666433322211 233456789998766655544 4467899999864 444
Q ss_pred EEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccc
Q psy14257 529 HVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCL 607 (841)
Q Consensus 529 ~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~ 607 (841)
..+. .+ -.....+++. ++.++++-...+.|...+..+++....+.........+ ..+++
T Consensus 175 ~~~~-~h--~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v-----------------~~~~~ 234 (420)
T 3vl1_A 175 RTLI-GH--RATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGV-----------------NSIAL 234 (420)
T ss_dssp EEEE-CC--SSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCE-----------------EEEEE
T ss_pred eEEc-CC--CCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCc-----------------cEEEE
Confidence 4443 22 2334677775 34555555556778878876666554443211110000 00000
Q ss_pred cCCCCceeeeCCCCceeecCCCcc--cccCceeEEeec-CCeEEEEecCCCCccccceeecCCCCCceEEEEecCCC-EE
Q psy14257 608 IGMNGTYKCQCPHVMKLMSDNKTC--QVADSQFIIFSR-PREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANK-KI 683 (841)
Q Consensus 608 ~~~~~~~~C~Cp~g~~l~~d~~tC--~~~~~~~l~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~-~i 683 (841)
....... -........++ ..+...+|+.+. ...|+..++..... ...+.......+.+++|+|... .|
T Consensus 235 ~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 235 FVGTDRQ------LHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQ--TIQLPSKFTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp EECCCSS------CGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCE--EEEECCTTSSCEEEEEECSSCTTEE
T ss_pred ecCCcce------eeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCce--eEEcccccCCCceeEEEeCCCCCEE
Confidence 0000000 00000001111 112234455443 44577777654321 1122222234578999999888 55
Q ss_pred EEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCe
Q psy14257 684 YWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSK 763 (841)
Q Consensus 684 yw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~ 763 (841)
+... ..+.|+..++...... ...+....-..+..+++. .+.++++ ....++
T Consensus 307 ~~g~-~dg~i~vwd~~~~~~~------------------------~~~~~~~~~~~v~~~~~~--~~~~l~s--~~~d~~ 357 (420)
T 3vl1_A 307 YAGY-ENGMLAQWDLRSPECP------------------------VGEFLINEGTPINNVYFA--AGALFVS--SGFDTS 357 (420)
T ss_dssp EEEE-TTSEEEEEETTCTTSC------------------------SEEEEESTTSCEEEEEEE--TTEEEEE--ETTTEE
T ss_pred EEEe-CCCeEEEEEcCCCcCc------------------------hhhhhccCCCCceEEEeC--CCCEEEE--ecCCcc
Confidence 5444 6789999988764300 112222122344555443 3456666 245678
Q ss_pred EEEEecCCc----------ceEEEEcCCCCCCCcCCCceEEEEeCCCC---eEEEEec
Q psy14257 764 IVVCNLEGE----------YQTTILSNESNDTSTLSKISSIAVWPVKG---KMFWSNV 808 (841)
Q Consensus 764 I~v~~l~g~----------~~~~~~~~~~~~~~~l~~p~~iavd~~~g---~lyw~d~ 808 (841)
|.+.++... ....+... .....+++..|... .|+-+-.
T Consensus 358 v~iw~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~~~~g~l~a~g~ 408 (420)
T 3vl1_A 358 IKLDIISDPESERPAIEFETPTFLVSN-------DDAVSQFCYVSDDESNGEVLEVGK 408 (420)
T ss_dssp EEEEEECCTTCCSCEECTTSCEEECCS-------SCCCCEEEEECCSSSSCEEEEEET
T ss_pred EEEEeccCCCCCccceeccCccEEccC-------CcceEEEEEccCCCCcceEEEEcC
Confidence 999988652 12222222 35677788887655 4554443
No 291
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.75 E-value=0.21 Score=52.62 Aligned_cols=265 Identities=9% Similarity=-0.043 Sum_probs=128.4
Q ss_pred CccccccccccccEEEEe--ccccceeeecccccC--CcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceE
Q psy14257 228 RHELRGVDLRTFNVIALI--SSLKNTIALDFYYTP--TANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLA 303 (841)
Q Consensus 228 ~~~I~~~~~~~~~~~~l~--~~~~~~~avd~~~~~--~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~gia 303 (841)
...|+..++.......+. .....+.++.|.... +. ++++-...+.|...++..+. .....+...-.....++
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~l~~~~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~ 118 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQR--YLATGDFGGNLHIWNLEAPE--MPVYSVKGHKEIINAID 118 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTC--CEEEEETTSCEEEECTTSCS--SCSEEECCCSSCEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCc--eEEEecCCCeEEEEeCCCCC--ccEEEEEecccceEEEe
Confidence 445665666655443332 223456788887753 33 55666677888888776543 12222222222233332
Q ss_pred ------EeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCc-cccccccC----cCCCceEE----EEccCCEEEEEeC
Q psy14257 304 ------VDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGEN-RSPLVTKN----IQWPSSLV----IDYNQDILYWCDS 368 (841)
Q Consensus 304 ------vD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~-~~~l~~~~----~~~P~gla----vD~~~~~lYwaD~ 368 (841)
+.+.+ -+++.. ..++.|..+++.... ........ -.....++ +.+.+ .++++-.
T Consensus 119 ~~~~~~~s~~~--~~l~~~--------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~ 187 (357)
T 3i2n_A 119 GIGGLGIGEGA--PEIVTG--------SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGY 187 (357)
T ss_dssp EESGGGCC-CC--CEEEEE--------ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEE
T ss_pred eccccccCCCc--cEEEEE--------eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEc
Confidence 22222 122221 235678888876443 22222111 11233444 33344 4444445
Q ss_pred CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc----cceEEEEecCCCcEEEEccCCceE-EE----Ee
Q psy14257 369 HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI----GKNLYWVESNLDQIEVAKLSGQFR-RT----LI 439 (841)
Q Consensus 369 ~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~----~~~LY~tD~~~~~I~v~~~~G~~~-~~----l~ 439 (841)
..+.|...++............ .. ...+.|. .+.++++-...+.|.+.++..... .. ..
T Consensus 188 ~d~~i~i~d~~~~~~~~~~~~~-----~~-------v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 255 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWETNIK-----NG-------VCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSE 255 (357)
T ss_dssp TTSEEEEEETTTTEEEEEEECS-----SC-------EEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEE
T ss_pred cCCeEEEEECccCceeeecCCC-----Cc-------eEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeecc
Confidence 5677888887765543221110 00 0112222 255555556678888888754221 11 11
Q ss_pred cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC-c----------------EEEEEecccCCCCCCceeEEEe
Q psy14257 440 AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH-R----------------SVIVRVDLLTSRGAWPNGLTLD 502 (841)
Q Consensus 440 ~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~-~----------------~~i~~~~~~~~~~~~P~glalD 502 (841)
.........++++|....++++-.. .+.|...++.... . ..+.... ..-.....+++.
T Consensus 256 ~~~~~~v~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~v~~~~~s 330 (357)
T 3i2n_A 256 KAHKSTVWQVRHLPQNRELFLTAGG--AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVT---LSTQPISSLDWS 330 (357)
T ss_dssp ECCSSCEEEEEEETTEEEEEEEEET--TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEE---CCSSCEEEEEEC
T ss_pred CCCcCCEEEEEECCCCCcEEEEEeC--CCcEEEeecCCCcccccccCCCCccccccccceeeccc---cCCCCeeEEEEc
Confidence 1344567899999875545555444 3455555543211 1 1221110 223345678887
Q ss_pred ccCCEEEEEeCCCCeEEEEEcC
Q psy14257 503 YQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 503 ~~~~~LYw~d~~~~~I~~~~~d 524 (841)
+.+..|+++-...+.|...++.
T Consensus 331 ~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 331 PDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp SSSTTEEEEEETTSEEEEEEEC
T ss_pred CCCCeEEEEecCCCcEEEEECC
Confidence 7666666555555667666654
No 292
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.72 E-value=0.94 Score=49.34 Aligned_cols=286 Identities=10% Similarity=0.007 Sum_probs=148.0
Q ss_pred ceEEEEecCCCcEEEEccCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+.+.++-...+.|.+.++.. ....+ +.........|+++|.+.+|..... .+.|...++.+........ .
T Consensus 120 ~~~l~s~s~Dg~i~vwd~~~~~~~~~-l~~h~~~V~~v~~~~~~~~l~sgs~---D~~i~iwd~~~~~~~~~~~-----~ 190 (410)
T 1vyh_C 120 FSVMVSASEDATIKVWDYETGDFERT-LKGHTDSVQDISFDHSGKLLASCSA---DMTIKLWDFQGFECIRTMH-----G 190 (410)
T ss_dssp SSEEEEEESSSCEEEEETTTCCCCEE-ECCCSSCEEEEEECTTSSEEEEEET---TSCCCEEETTSSCEEECCC-----C
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEE-EeccCCcEEEEEEcCCCCEEEEEeC---CCeEEEEeCCCCceeEEEc-----C
Confidence 45566666678888888764 34444 3334456789999987555544443 3444444554432221111 2
Q ss_pred CCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe-eEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCC
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD-HHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g 569 (841)
.-.....+++.+.+..|+ +-...+.|...++.... ..++. .+ -.....+++. ++.++++-...+.|...+..++
T Consensus 191 h~~~V~~v~~~p~~~~l~-s~s~D~~i~~wd~~~~~~~~~~~-~h--~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~ 266 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIV-SASRDKTIKMWEVQTGYCVKTFT-GH--REWVRMVRPNQDGTLIASCSNDQTVRVWVVATK 266 (410)
T ss_dssp CSSCEEEEEECSSSSEEE-EEETTSEEEEEETTTCCEEEEEE-CC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCEEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEEe-CC--CccEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 233467888887655555 44456788888886543 33333 22 1223455553 4666666666677777776655
Q ss_pred cceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEE
Q psy14257 570 SDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIR 648 (841)
Q Consensus 570 ~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~ 648 (841)
+....+.........+...|... ...+....+ ... .....+.++|+.+. ...|+
T Consensus 267 ~~~~~~~~h~~~v~~~~~~~~~~-----------~~~~~~~~~---------~~~-----~~~~~~g~~l~sgs~D~~i~ 321 (410)
T 1vyh_C 267 ECKAELREHRHVVECISWAPESS-----------YSSISEATG---------SET-----KKSGKPGPFLLSGSRDKTIK 321 (410)
T ss_dssp CEEEEECCCSSCEEEEEECCSCG-----------GGGGGGCCS---------CC------------CCEEEEEETTSEEE
T ss_pred ceeeEecCCCceEEEEEEcCccc-----------ccchhhhcc---------ccc-----cccCCCCCEEEEEeCCCeEE
Confidence 54433322111111110001000 000000000 000 00001234455443 44577
Q ss_pred EEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCce
Q psy14257 649 GVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQ 728 (841)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (841)
..++..... +..+ ......+.+|+|++....|+-.. ..++|+..++....
T Consensus 322 iwd~~~~~~--~~~~-~~h~~~v~~v~~~~~g~~l~s~s-~D~~i~vwd~~~~~-------------------------- 371 (410)
T 1vyh_C 322 MWDVSTGMC--LMTL-VGHDNWVRGVLFHSGGKFILSCA-DDKTLRVWDYKNKR-------------------------- 371 (410)
T ss_dssp EEETTTTEE--EEEE-ECCSSCEEEEEECSSSSCEEEEE-TTTEEEEECCTTSC--------------------------
T ss_pred EEECCCCce--EEEE-ECCCCcEEEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--------------------------
Confidence 777654321 1111 11224567899998888777555 67889988876544
Q ss_pred EEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec
Q psy14257 729 IQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL 769 (841)
Q Consensus 729 ~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l 769 (841)
....+...-..+.+|++.+.+..|.-. ...++|.+.++
T Consensus 372 ~~~~~~~h~~~v~~l~~~~~~~~l~sg---s~D~~i~vW~~ 409 (410)
T 1vyh_C 372 CMKTLNAHEHFVTSLDFHKTAPYVVTG---SVDQTVKVWEC 409 (410)
T ss_dssp CCEEEECCSSCEEEEEECSSSSCEEEE---ETTSEEEEEC-
T ss_pred eEEEEcCCCCcEEEEEEcCCCCEEEEE---eCCCcEEEEeC
Confidence 122234455668889998877655544 24677887654
No 293
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.71 E-value=0.33 Score=50.79 Aligned_cols=255 Identities=10% Similarity=-0.066 Sum_probs=130.3
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCE
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGI 330 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I 330 (841)
+.++.|.... . +.++-...+.|...++..+........+...-.....+++.+.+ +.+++.. ..++.|
T Consensus 14 v~~~~~s~~~-~--~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~--------~~dg~i 81 (342)
T 1yfq_A 14 ISDIKIIPSK-S--LLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVG--------TVQGEI 81 (342)
T ss_dssp EEEEEEEGGG-T--EEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESS-SEEEEEE--------ETTSCE
T ss_pred EEEEEEcCCC-C--EEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCC-CcEEEEE--------cCCCeE
Confidence 5566776643 2 44444567788777776543101112222233456667777654 2033222 235689
Q ss_pred EEEcc-CCCcccccccc-CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEE-EEeeeeecCCCccccCCCCCCc
Q psy14257 331 EKAGM-HGENRSPLVTK-NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTV-SFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 331 ~~~~~-dG~~~~~l~~~-~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~-~~~~~~~~~~~~~~i~~~~~~a 407 (841)
..+++ .+.....+... .-.....|++.+ ++.|+ +-...+.|...++....... ......+. .+. ......+
T Consensus 82 ~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~---~~~-~~~~v~~ 155 (342)
T 1yfq_A 82 LKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLI-AASWDGLIEVIDPRNYGDGVIAVKNLNSN---NTK-VKNKIFT 155 (342)
T ss_dssp EEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEE-EEETTSEEEEECHHHHTTBCEEEEESCSS---SSS-SCCCEEE
T ss_pred EEEEeccCCceEeccccCCCCceEEEEeCC-CCEEE-EEcCCCeEEEEcccccccccccccCCeee---EEe-eCCceEE
Confidence 99998 76654333221 334456888888 55555 44456778877765300000 00000000 000 0001123
Q ss_pred cccccceEEEEecCCCcEEEEccCC-ce--EEEEecCCCCCceeEEEcC-CCCeEEEEecCCCCCeEEEecCCC------
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSG-QF--RRTLIAGDMESPRAIALDP-RFGLLFWTDWDSKAPRIERCSMSG------ 477 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G-~~--~~~l~~~~l~~P~giavd~-~~g~Ly~td~~~~~~~I~r~~ldG------ 477 (841)
++|..+.|+. -...+.|.+.++.. .. ........-..+..|+++| ...+|+.... .+.|...+++.
T Consensus 156 ~~~~~~~l~~-~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~---dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 156 MDTNSSRLIV-GMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSI---DGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEECSSEEEE-EESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEET---TSEEEEEECCTTCCSTT
T ss_pred EEecCCcEEE-EeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEec---CCcEEEEEEcCCCcccc
Confidence 4455555444 44567899988876 21 2222323335678999998 6555555443 45555544443
Q ss_pred -CCcEEEEEecccC---CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee
Q psy14257 478 -EHRSVIVRVDLLT---SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH 528 (841)
Q Consensus 478 -~~~~~i~~~~~~~---~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~ 528 (841)
.....+....... ........+++.+.+..|+.+. ..+.|...++.....
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTRKK 285 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCccHhH
Confidence 3333332210000 0022677899987666666554 467899999875543
No 294
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.71 E-value=0.92 Score=49.06 Aligned_cols=108 Identities=8% Similarity=0.031 Sum_probs=70.1
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTS 491 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~ 491 (841)
++++++-...+.|.+.++........+.........|+++|...+|+.... .+.|...+++ +.....+ . .
T Consensus 109 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~~~~~~-~-----~ 179 (420)
T 3vl1_A 109 MRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQ---DMQLKIWSVKDGSNPRTL-I-----G 179 (420)
T ss_dssp SCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCCCEEE-E-----C
T ss_pred CCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeC---CCeEEEEeCCCCcCceEE-c-----C
Confidence 444445455677888888766655555455567889999998666665553 4677777775 3344433 2 2
Q ss_pred CCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEE
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHV 530 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~ 530 (841)
.-.....+++.+.+..|+.+. ..+.|...++.......
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~-~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSAS-LDGTIRLWECGTGTTIH 217 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEEc-CCCcEEEeECCCCceeE
Confidence 345578899998766666544 46788888887554433
No 295
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=96.70 E-value=0.0012 Score=70.25 Aligned_cols=86 Identities=26% Similarity=0.627 Sum_probs=19.2
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCccc--ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCccccccccC
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFC--DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C--~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
.|.++ +.|+.. ..| .|.+||.+..| ++|. ..|.+ .|. +.+.|.|++||. |..|+ .++|.
T Consensus 218 ~C~~~-G~C~~~-~~C----~C~~G~~G~~C~~~~C~---~~C~~~g~C~---~~~~C~C~~G~~----G~~C~-~~~C~ 280 (324)
T 2ygq_A 218 TCFNG-GTCFYP-GKC----ICPPGLEGEQCEISKCP---QPCRNGGKCI---GKSKCKCSKGYQ----GDLCS-KPVCE 280 (324)
T ss_dssp CCCSS-CCBSCS-SCB----CCCTTCCTTTTC------------------------------------------------
T ss_pred CCCCC-CeeCCC-Cee----eCCCCccCCCCCcCcCC---CcCCCCCEEC---CCCEEECCCCCc----CCCCc-CCCCC
Confidence 57776 788663 567 89999988778 4453 24542 665 357999999997 55676 34553
Q ss_pred CCCCccC--ceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 177 AWGTCSQ--DCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 177 ~~~~Cs~--~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
..|+. .|.+ .++|.|.+||. +..|...
T Consensus 281 --~~C~~~g~C~~-----~~~C~C~~G~~----G~~C~~~ 309 (324)
T 2ygq_A 281 --PGCGAHGTCHE-----PNKCQCQEGWH----GRHCNKR 309 (324)
T ss_dssp ----------------------------------------
T ss_pred --CCCCCCCEECC-----CCEeECCCCCc----CCCCCCC
Confidence 24432 4533 47899999997 4567543
No 296
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.64 E-value=0.86 Score=47.88 Aligned_cols=272 Identities=11% Similarity=-0.005 Sum_probs=145.2
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
+++.++-...+.|.+.++........+.........++++|...+|+.... .+.|...++.......... .
T Consensus 44 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~------~ 114 (369)
T 3zwl_B 44 GDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA---DYSIKLWDVSNGQCVATWK------S 114 (369)
T ss_dssp SCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET---TTEEEEEETTTCCEEEEEE------C
T ss_pred CCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEEee------c
Confidence 444445455678888887544333333334456789999997666665543 4678888876544433333 2
Q ss_pred CCCceeEEEeccCCEEEEEeCC----CCeEEEEEcCCCe------------eEEEEcCCCCCCcceEEEEe-cCeEEEEe
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAK----SDSIHTVTYDGKD------------HHVVLSNHDSLTHPFAIALF-ENHVYWTD 555 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~----~~~I~~~~~dG~~------------~~~i~~~~~~l~~P~gla~~-~~~lY~td 555 (841)
-..+..+++.+.+..|+.+... .+.|...++.... ...+... ........+++. ++.++++-
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~ 193 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH-EGLDAATVAGWSTKGKYIIAG 193 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC-TTCCCEEEEEECGGGCEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCC-cCccceeEEEEcCCCCEEEEE
Confidence 3457889999877766665542 2677777765431 1111111 111134556653 33333443
Q ss_pred CCCCeEEEEeccCC-cceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccccc
Q psy14257 556 WRTNSVIRANKWNG-SDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVA 634 (841)
Q Consensus 556 ~~~~~i~~~~~~~g-~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~ 634 (841)
...+.|...+..++ .....+.... +...+. .+.++
T Consensus 194 ~~dg~i~i~d~~~~~~~~~~~~~~~--------------------------------~~v~~~-----~~~~~------- 229 (369)
T 3zwl_B 194 HKDGKISKYDVSNNYEYVDSIDLHE--------------------------------KSISDM-----QFSPD------- 229 (369)
T ss_dssp ETTSEEEEEETTTTTEEEEEEECCS--------------------------------SCEEEE-----EECTT-------
T ss_pred cCCCEEEEEECCCCcEeEEEEecCC--------------------------------CceeEE-----EECCC-------
Confidence 44567776766542 2222221100 001110 01111
Q ss_pred CceeEEee-cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCC-------------eEEEEEccc
Q psy14257 635 DSQFIIFS-RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYN-------------EVKRSSIVG 700 (841)
Q Consensus 635 ~~~~l~~~-~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~-------------~I~~~~~~g 700 (841)
..+|+.+ ....|+..++..... ...+. ....+..+++.+....++....... .|+..++..
T Consensus 230 -~~~l~~~~~d~~i~v~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 230 -LTYFITSSRDTNSFLVDVSTLQV--LKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred -CCEEEEecCCceEEEEECCCCce--eeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 1223333 345566666654321 11111 2345678899999999988874322 333333322
Q ss_pred CceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc
Q psy14257 701 GQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE 772 (841)
Q Consensus 701 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~ 772 (841)
.. ....+......+..|++.+.++.|+-+ ...++|.+.+++..
T Consensus 305 ~~--------------------------~~~~~~~~~~~v~~~~~s~~~~~l~s~---~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 305 EE--------------------------EIGRVQGHFGPLNTVAISPQGTSYASG---GEDGFIRLHHFEKS 347 (369)
T ss_dssp CC--------------------------EEEEEECCSSCEEEEEECTTSSEEEEE---ETTSEEEEEEECHH
T ss_pred Cc--------------------------chhheecccCcEEEEEECCCCCEEEEE---cCCCeEEEEECccc
Confidence 22 233344556778899999877666655 24678999988754
No 297
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.63 E-value=1.1 Score=49.06 Aligned_cols=142 Identities=11% Similarity=-0.011 Sum_probs=74.5
Q ss_pred EEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCC
Q psy14257 415 LYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGA 494 (841)
Q Consensus 415 LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~ 494 (841)
+.++-...+.|.+.++........+.........+++++ ..|+.... .+.|...++.......... ....
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~---dg~i~~wd~~~~~~~~~~~-----~~~~ 240 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSR---DATLRVWDIETGQCLHVLM-----GHVA 240 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--TEEEEEET---TSEEEEEESSSCCEEEEEE-----CCSS
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--CEEEEEeC---CCEEEEEECCCCcEEEEEc-----CCcc
Confidence 444444556677777654333222333334556777763 34544442 4677777775433333333 2334
Q ss_pred CceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 495 WPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 495 ~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
....+++| +..|+.+ ...+.|...++........+..+ -.....+++.+.+|+.+ ...+.|...+..+++..
T Consensus 241 ~v~~~~~~--~~~l~~~-~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 241 AVRCVQYD--GRRVVSG-AYDFMVKVWDPETETCLHTLQGH--TNRVYSLQFDGIHVVSG-SLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CEEEEEEC--SSCEEEE-ETTSCEEEEEGGGTEEEEEECCC--SSCEEEEEECSSEEEEE-ETTSCEEEEETTTCCEE
T ss_pred cEEEEEEC--CCEEEEE-cCCCEEEEEECCCCcEeEEecCC--CCceEEEEECCCEEEEE-eCCCeEEEEECCCCCEE
Confidence 45566663 4455544 44678888888765443333322 22345666644444444 44567777776655533
No 298
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.61 E-value=0.69 Score=55.01 Aligned_cols=235 Identities=10% Similarity=0.092 Sum_probs=134.0
Q ss_pred eecCceeEEEeeecCCCCCCCCCCEEEEccC---CCcccccccc-Cc-----CCCceEEEEccCCEEEEEeCCC----Ce
Q psy14257 306 WIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH---GENRSPLVTK-NI-----QWPSSLVIDYNQDILYWCDSHL----NT 372 (841)
Q Consensus 306 ~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d---G~~~~~l~~~-~~-----~~P~glavD~~~~~lYwaD~~~----~~ 372 (841)
+.++.+|+++.+-+. ..+.|++.+.+ |...+++... .+ ..-.++++.+++++|.++-... ..
T Consensus 116 pdG~~~~~~~~~~~~-----~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~ 190 (741)
T 1yr2_A 116 RRGASVFYSWNSGLM-----NQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRT 190 (741)
T ss_dssp EETTEEEEEEECSSC-----SSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEE
T ss_pred EECCEEEEEEEcCCC-----eEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEE
Confidence 456667776664332 23578888876 5555554322 11 1345788999988887764322 36
Q ss_pred EEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc-ceEEEEecC-------------CCcEEEEccCCceE-EE
Q psy14257 373 VESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG-KNLYWVESN-------------LDQIEVAKLSGQFR-RT 437 (841)
Q Consensus 373 I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~-~~LY~tD~~-------------~~~I~v~~~~G~~~-~~ 437 (841)
|+..+++++............ ..+.|.. +.||++... ..+|++.++.+... ..
T Consensus 191 i~v~dl~tg~~~~~~~~~~~~------------~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~ 258 (741)
T 1yr2_A 191 VKFVGVADGKPLADELKWVKF------------SGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ 258 (741)
T ss_dssp EEEEETTTCCEEEEEEEEEES------------CCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCE
T ss_pred EEEEECCCCCCCCccCCCcee------------ccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCE
Confidence 999999887654331111100 1233422 566666432 23577877754331 12
Q ss_pred EecCCCC---CceeEEEcCCCCeEEEEecCC--CCCeEEEecCCCC--C-cEEEEEecccCCCCCCceeEEEeccCCEEE
Q psy14257 438 LIAGDME---SPRAIALDPRFGLLFWTDWDS--KAPRIERCSMSGE--H-RSVIVRVDLLTSRGAWPNGLTLDYQLTRIY 509 (841)
Q Consensus 438 l~~~~l~---~P~giavd~~~g~Ly~td~~~--~~~~I~r~~ldG~--~-~~~i~~~~~~~~~~~~P~glalD~~~~~LY 509 (841)
++..... .-.+++++|++.+|+++.... ....|+..++++. . .+.+.. ....-... +++.+++||
T Consensus 259 lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~------~~~~~~~~-~~~dg~~l~ 331 (741)
T 1yr2_A 259 PVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP------DLKAQWDF-VDGVGDQLW 331 (741)
T ss_dssp EEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC------SSSSCEEE-EEEETTEEE
T ss_pred EEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC------CCCceEEE-EeccCCEEE
Confidence 2222222 246889999877888876432 2568999998765 3 444433 11111222 346688888
Q ss_pred EEeC---CCCeEEEEEcCC--CeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCC--eEEEEec
Q psy14257 510 WIDA---KSDSIHTVTYDG--KDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTN--SVIRANK 566 (841)
Q Consensus 510 w~d~---~~~~I~~~~~dG--~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~--~i~~~~~ 566 (841)
+... .+.+|..+++++ ...+.++.... ....++++++++|+++-...+ .|+.++.
T Consensus 332 ~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~--~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 332 FVSGDGAPLKKIVRVDLSGSTPRFDTVVPESK--DNLESVGIAGNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp EEECTTCTTCEEEEEECSSSSCEEEEEECCCS--SEEEEEEEEBTEEEEEEEETTEEEEEEEET
T ss_pred EEECCCCCCCEEEEEeCCCCccccEEEecCCC--CeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 8753 256899999987 34555554321 123467778888888765443 4555553
No 299
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.60 E-value=0.002 Score=73.44 Aligned_cols=36 Identities=36% Similarity=1.083 Sum_probs=32.1
Q ss_pred CCCCCCcccC-CCCCeEecCCCCCCCCCCCCCCCCCcccc
Q psy14257 94 ACEPHEFDCQ-DVLRTCIPKALVCDGEPACFNGEDEMFCD 132 (841)
Q Consensus 94 ~C~~~~~~C~-~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~ 132 (841)
.|. .+|.|. + +.||+..++|||..||.|++||..|.
T Consensus 65 ~c~-~~f~C~~~--g~Ci~~~~~Cdg~~dC~d~sDE~~C~ 101 (554)
T 3ojy_A 65 QCG-QDFQCKET--GRCLKRHLVCNGDQDCLDGSDEDDCE 101 (554)
T ss_dssp CCS-SSEECSSS--CCEECGGGTTSSSCCSSSCTTSSSCC
T ss_pred CCC-CcCccCCC--CEEcccccccCCcccCCCccccccCC
Confidence 464 689998 6 89999999999999999999998874
No 300
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.60 E-value=0.0013 Score=63.12 Aligned_cols=52 Identities=25% Similarity=0.648 Sum_probs=42.5
Q ss_pred CCceecCCCCccccccccCCC-C---CccCceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 158 RDMYLQPDLITCSYLHPCEAW-G---TCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 158 ~Gy~l~~d~~~C~~~~eC~~~-~---~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
.||.+ ...|.+++||... + .|++.|.++ .++|.|.|.+||.|..++++|+++
T Consensus 113 ~Gf~~---~~~~~di~eC~~~~~~~~~C~~~C~n~--~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 113 TGFEA---FYAAEDIDECQVAPGEAPTCDHHCHNH--LGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp CEEEE---EEEEEECCTTCCCTTSCCSSSSEEEEE--TTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCcee---eeeccccCcccCCCCCCCccCCccccC--CCCEEEeCCCCcEECCCCCccccc
Confidence 56654 2356788999743 3 399999999 999999999999999999999875
No 301
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.58 E-value=0.91 Score=47.35 Aligned_cols=254 Identities=9% Similarity=-0.020 Sum_probs=133.5
Q ss_pred CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC----cEEEEEecccCCCCCCceeEEEeccCC-EEEEEeCCCCeE
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH----RSVIVRVDLLTSRGAWPNGLTLDYQLT-RIYWIDAKSDSI 518 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~----~~~i~~~~~~~~~~~~P~glalD~~~~-~LYw~d~~~~~I 518 (841)
....+++++|...+|+.+.. .+.|...+++... ...+.. .-.....+++.+.+. .|+.+. ..+.|
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~---d~~v~iw~~~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~~l~~~~-~dg~i 81 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSW---DGSLTVYKFDIQAKNVDLLQSLR------YKHPLLCCNFIDNTDLQIYVGT-VQGEI 81 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEET---TSEEEEEEEETTTTEEEEEEEEE------CSSCEEEEEEEESSSEEEEEEE-TTSCE
T ss_pred CcEEEEEEcCCCCEEEEEcC---CCeEEEEEeCCCCccccceeeee------cCCceEEEEECCCCCcEEEEEc-CCCeE
Confidence 45678999987666666553 3566666665444 222222 334568899987766 566555 46789
Q ss_pred EEEEc-CCCeeEEEEcC-CCCCCcceEEEEecCeEEEEeCCCCeEEEEeccC--CcceEEEecccCCCceeccCCcccCC
Q psy14257 519 HTVTY-DGKDHHVVLSN-HDSLTHPFAIALFENHVYWTDWRTNSVIRANKWN--GSDVTLIQRTLTQPFIYVNGVVKKSP 594 (841)
Q Consensus 519 ~~~~~-dG~~~~~i~~~-~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~--g~~~~~i~~~~~~p~~~h~qp~~~n~ 594 (841)
...++ .+.....+... . -.....|++..+.++++-...+.|...+..+ +...........
T Consensus 82 ~~wd~~~~~~~~~~~~~~~--~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-------------- 145 (342)
T 1yfq_A 82 LKVDLIGSPSFQALTNNEA--NLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN-------------- 145 (342)
T ss_dssp EEECSSSSSSEEECBSCCC--CSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS--------------
T ss_pred EEEEeccCCceEeccccCC--CCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeee--------------
Confidence 99998 77665444320 1 2234566665344555544556666655432 111100000000
Q ss_pred CCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCC-CCccccceeecCCCCCceE
Q psy14257 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEH-PYYHTIPTISIPQVFSPNN 673 (841)
Q Consensus 595 C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~-~~~~~~~~~~~~~~~~~~~ 673 (841)
. ....+...+.. +. +..++..+....|+..++.. ... ............+..
T Consensus 146 --~----------~~~~~~v~~~~-----~~---------~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~i~~ 198 (342)
T 1yfq_A 146 --N----------TKVKNKIFTMD-----TN---------SSRLIVGMNNSQVQWFRLPLCEDD-NGTIEESGLKYQIRD 198 (342)
T ss_dssp --S----------SSSCCCEEEEE-----EC---------SSEEEEEESTTEEEEEESSCCTTC-CCEEEECSCSSCEEE
T ss_pred --E----------EeeCCceEEEE-----ec---------CCcEEEEeCCCeEEEEECCccccc-cceeeecCCCCceeE
Confidence 0 00001111111 01 11133334455777777765 221 111222223346789
Q ss_pred EEEec-CCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCC---------CCCccee
Q psy14257 674 LNFDA-ANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAG---------ISHPSGL 743 (841)
Q Consensus 674 v~~d~-~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~---------~~~p~gl 743 (841)
++|.+ ..+.++... ..+.|+..+++..... .... ....+... ...+..|
T Consensus 199 i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~-------------------~~~~-~~~~~~~~~~~~~~~~~~~~i~~~ 257 (342)
T 1yfq_A 199 VALLPKEQEGYACSS-IDGRVAVEFFDDQGDD-------------------YNSS-KRFAFRCHRLNLKDTNLAYPVNSI 257 (342)
T ss_dssp EEECSGGGCEEEEEE-TTSEEEEEECCTTCCS-------------------TTCT-TCEEEECCCCCTTCCSSCCCEEEE
T ss_pred EEECCCCCCEEEEEe-cCCcEEEEEEcCCCcc-------------------cccc-cceeeecccccccccccceeEEEE
Confidence 99998 666666555 5788888776554000 0000 01111111 2367889
Q ss_pred EEeecCCcEEEEecCCCCCeEEEEecCCcce
Q psy14257 744 AIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQ 774 (841)
Q Consensus 744 AvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~ 774 (841)
++.+.++.|+... ..++|.+.++.....
T Consensus 258 ~~s~~~~~l~~~~---~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 258 EFSPRHKFLYTAG---SDGIISCWNLQTRKK 285 (342)
T ss_dssp EECTTTCCEEEEE---TTSCEEEEETTTTEE
T ss_pred EEcCCCCEEEEec---CCceEEEEcCccHhH
Confidence 9998887777663 467899999975443
No 302
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.51 E-value=0.019 Score=64.69 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=51.7
Q ss_pred CCCCceeEEEcCCCCeEEE-EecCC---------CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEE
Q psy14257 442 DMESPRAIALDPRFGLLFW-TDWDS---------KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWI 511 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~-td~~~---------~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~ 511 (841)
.|..|.+|++|+. |.||+ ||... .+..+++++.+....+.++.. .....|+|+++.++++.||++
T Consensus 474 ~fnsPDnL~fd~~-G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~----P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 474 MFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG----PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC----CTTCEEEEEEECTTSSEEEEE
T ss_pred ccCCCCceEECCC-CCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC----CCCccccCCEECCCCCEEEEE
Confidence 3789999999986 88999 88531 134899999864444445441 345789999999999999998
Q ss_pred eCCCC
Q psy14257 512 DAKSD 516 (841)
Q Consensus 512 d~~~~ 516 (841)
-..-+
T Consensus 549 vQHPG 553 (592)
T 4a9v_A 549 IQHPG 553 (592)
T ss_dssp EESTT
T ss_pred EeCCC
Confidence 65443
No 303
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=96.51 E-value=0.73 Score=49.07 Aligned_cols=237 Identities=10% Similarity=-0.016 Sum_probs=125.2
Q ss_pred ccccceEEEEecCCCcEEEEccCC-ceEEE---EecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEE
Q psy14257 409 LWIGKNLYWVESNLDQIEVAKLSG-QFRRT---LIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIV 484 (841)
Q Consensus 409 dw~~~~LY~tD~~~~~I~v~~~~G-~~~~~---l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~ 484 (841)
.|..+..+++-...+.|.+.+++. +...+ ...+.-.....|+++|...+|.-... .+.|..-++.........
T Consensus 89 ~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~---d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 89 TWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSK---DICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeC---CCeEEEEECCCCcEEEEE
Confidence 333344445556677888888764 32221 12233355789999998666655543 356666666533222222
Q ss_pred EecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEE
Q psy14257 485 RVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVI 562 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~ 562 (841)
. ..-.....+++.+.+..++.+-...+.|...|+........+........+..+++. +++++++-...+.|.
T Consensus 166 ~-----~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 166 R-----AHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp C-----CCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred c-----CcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 1 233456788888777777777666788888888654332222111112234567764 456777666667777
Q ss_pred EEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee
Q psy14257 563 RANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS 642 (841)
Q Consensus 563 ~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~ 642 (841)
..+..+++.+..+..... ... ..+..|+| ..+|+.+
T Consensus 241 ~wd~~~~~~~~~~~~h~~--------------------~v~----------~v~fsp~g--------------~~~lasg 276 (344)
T 4gqb_B 241 LVDTKSTSCVLSSAVHSQ--------------------CVT----------GLVFSPHS--------------VPFLASL 276 (344)
T ss_dssp EEESCC--CCEEEECCSS--------------------CEE----------EEEECSSS--------------SCCEEEE
T ss_pred EEECCCCcEEEEEcCCCC--------------------CEE----------EEEEccCC--------------CeEEEEE
Confidence 777665554433321100 000 01112222 1222222
Q ss_pred -cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccC
Q psy14257 643 -RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGG 701 (841)
Q Consensus 643 -~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~ 701 (841)
....|+..++.... +..+ ......+.+|+|.|..+.|+.+-...++|+..++...
T Consensus 277 s~D~~i~vwd~~~~~---~~~~-~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSE---LFRS-QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp ETTSCEEEECTTCCE---EEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred eCCCeEEEEECCCCc---EEEE-cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 23445555443321 1111 1122457899999998888877667889988877643
No 304
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.50 E-value=0.98 Score=46.78 Aligned_cols=270 Identities=11% Similarity=0.063 Sum_probs=142.9
Q ss_pred EEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCc
Q psy14257 417 WVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWP 496 (841)
Q Consensus 417 ~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P 496 (841)
.+-...+.|.+.++........+...-...+.+++.|...+|+.... .+.|...++.......... ..-...
T Consensus 29 ~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i~vwd~~~~~~~~~~~-----~h~~~v 100 (304)
T 2ynn_A 29 LTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD---DFRIRVFNYNTGEKVVDFE-----AHPDYI 100 (304)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET---TSEEEEEETTTCCEEEEEE-----CCSSCE
T ss_pred EEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECC---CCEEEEEECCCCcEEEEEe-----CCCCcE
Confidence 33334556666666543322222222234577888887666665543 4677777775433332233 233456
Q ss_pred eeEEEeccCCEEEEEeCCCCeEEEEEcCCC-eeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceE
Q psy14257 497 NGLTLDYQLTRIYWIDAKSDSIHTVTYDGK-DHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVT 573 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~~~~~I~~~~~dG~-~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~ 573 (841)
..+++.+.+..|+ +-...+.|...++... .....+..+ -.....+++. ++.++.+-...+.|...+...+....
T Consensus 101 ~~~~~~~~~~~l~-sgs~D~~v~lWd~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~ 177 (304)
T 2ynn_A 101 RSIAVHPTKPYVL-SGSDDLTVKLWNWENNWALEQTFEGH--EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (304)
T ss_dssp EEEEECSSSSEEE-EEETTSCEEEEEGGGTTEEEEEECCC--CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSE
T ss_pred EEEEEcCCCCEEE-EECCCCeEEEEECCCCcchhhhhccc--CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 7899987665555 4445678888888654 333333332 1234566664 34566665566677666654333222
Q ss_pred EEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEec
Q psy14257 574 LIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDL 652 (841)
Q Consensus 574 ~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l 652 (841)
.+..... .+. ......|. +..++|+.+ ....|+..++
T Consensus 178 ~~~~~~~-------------------~~v----------~~~~~~~~-------------~~~~~l~s~s~D~~i~iWd~ 215 (304)
T 2ynn_A 178 TLTTGQE-------------------RGV----------NYVDYYPL-------------PDKPYMITASDDLTIKIWDY 215 (304)
T ss_dssp EEECCCT-------------------TCE----------EEEEECCS-------------TTCCEEEEEETTSEEEEEET
T ss_pred eeccCCc-------------------CcE----------EEEEEEEc-------------CCCCEEEEEcCCCeEEEEeC
Confidence 2111000 000 00111110 112233333 3445666666
Q ss_pred CCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEE
Q psy14257 653 EHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLV 732 (841)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 732 (841)
..... +..+. .....+..++|.|....|.-.. ..++|+..++.... ....
T Consensus 216 ~~~~~--~~~~~-~h~~~v~~~~~~p~~~~l~s~s-~Dg~i~iWd~~~~~--------------------------~~~~ 265 (304)
T 2ynn_A 216 QTKSC--VATLE-GHMSNVSFAVFHPTLPIIISGS-EDGTLKIWNSSTYK--------------------------VEKT 265 (304)
T ss_dssp TTTEE--EEEEE-CCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTCC--------------------------EEEE
T ss_pred CCCcc--ceeeC-CCCCCEEEEEECCCCCEEEEEc-CCCeEEEEECCCCc--------------------------eeee
Confidence 43321 11111 1234567899999877665544 67899999887654 3333
Q ss_pred eeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCC
Q psy14257 733 VDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEG 771 (841)
Q Consensus 733 ~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g 771 (841)
+......+..||+.+.++.+|.+. ...+.+.++++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~as--g~~~g~~~~~~~~ 302 (304)
T 2ynn_A 266 LNVGLERSWCIATHPTGRKNYIAS--GFDNGFTVLSLGN 302 (304)
T ss_dssp ECCSSSSEEEEEECTTCGGGCEEE--EETTEEEEEECC-
T ss_pred ccCCCccEEEEEECCCCCceEEEE--ecCCceEEEEecc
Confidence 444566778889888887765552 2456666666543
No 305
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.49 E-value=0.23 Score=59.19 Aligned_cols=186 Identities=12% Similarity=0.073 Sum_probs=107.6
Q ss_pred CCEEEEccCCCcc-ccccccCcC---CCceEEEEccCCEEEEEeC----CCCeEEEEEecCC--c-cEEEEeeeeecCCC
Q psy14257 328 GGIEKAGMHGENR-SPLVTKNIQ---WPSSLVIDYNQDILYWCDS----HLNTVESVRVDGS--E-RTVSFNLEVLGSDS 396 (841)
Q Consensus 328 ~~I~~~~~dG~~~-~~l~~~~~~---~P~glavD~~~~~lYwaD~----~~~~I~~~~ldG~--~-~~~~~~~~~~~~~~ 396 (841)
.+|++.++.+... ..++...-. +-.++++.++++.|+++-. ....|+.+++++. . .+.+.... +.
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~----~~ 318 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL----KA 318 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS----SS
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC----Cc
Confidence 4688888754332 223322212 3457889888888887654 2458999999876 4 44443211 00
Q ss_pred ccccCCCCCCccccccceEEEEec---CCCcEEEEccCC--ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEE
Q psy14257 397 RVGIPNCRPEDNLWIGKNLYWVES---NLDQIEVAKLSG--QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIE 471 (841)
Q Consensus 397 ~~~i~~~~~~avdw~~~~LY~tD~---~~~~I~v~~~~G--~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~ 471 (841)
.. ..++..++.||+... .+.+|.++++++ ...+.++...-....+++++ +++|+++.......+|+
T Consensus 319 ~~-------~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 319 QW-------DFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp CE-------EEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEE
T ss_pred eE-------EEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEE
Confidence 00 011234577877643 256799999886 34555554432334566665 57788776443356899
Q ss_pred EecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC---CCCeEEEEEcCCCeeEEE
Q psy14257 472 RCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA---KSDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 472 r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~---~~~~I~~~~~dG~~~~~i 531 (841)
..+++|...+.+.. .......++++++.++.|+++-. .-..|+.+++++...+.+
T Consensus 390 ~~~~~g~~~~~l~~-----~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l 447 (741)
T 1yr2_A 390 AFDLDGKPAGAVSL-----PGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPW 447 (741)
T ss_dssp EEETTSCEEEECBC-----SSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEEC
T ss_pred EEeCCCCceeeccC-----CCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEE
Confidence 99988764433311 12233456777766677776532 235889999887665544
No 306
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=96.46 E-value=0.0026 Score=67.69 Aligned_cols=80 Identities=25% Similarity=0.709 Sum_probs=39.1
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCccc--ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCccccccccC
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFC--DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C--~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
.|.++ +.|+. ...| .|.+||.+..| +.|. ..|.+ .|.+ .+.|.|++||. |..|+ +++|.
T Consensus 186 ~C~~~-G~C~~-~~~C----~C~~G~~G~~C~~~~C~---~~C~~~G~C~~---~~~C~C~~G~~----G~~C~-~~~C~ 248 (324)
T 2ygq_A 186 RCMNG-GLCVT-PGFC----ICPPGFYGVNCDKANCS---TTCFNGGTCFY---PGKCICPPGLE----GEQCE-ISKCP 248 (324)
T ss_dssp CCCTT-CEECS-SCCE----ECCTTCBTTTTCBCCCS---SCCCSSCCBSC---SSCBCCCTTCC----TTTTC------
T ss_pred CCCCC-CEEcC-CCEE----eCCCCccCCCcccCcCC---CCCCCCCeeCC---CCeeeCCCCcc----CCCCC-cCcCC
Confidence 57776 88976 4667 89999988778 3453 35643 6765 37999999997 56775 34553
Q ss_pred CCCCccC--ceeecCCCCceEEeecCCeee
Q psy14257 177 AWGTCSQ--DCEPSVSNNSYKCTCHAGYEL 204 (841)
Q Consensus 177 ~~~~Cs~--~C~~~~~~g~~~C~C~~G~~l 204 (841)
.+|.. .|. +.++|.|.+||..
T Consensus 249 --~~C~~~g~C~-----~~~~C~C~~G~~G 271 (324)
T 2ygq_A 249 --QPCRNGGKCI-----GKSKCKCSKGYQG 271 (324)
T ss_dssp ------------------------------
T ss_pred --CcCCCCCEEC-----CCCEEECCCCCcC
Confidence 23432 343 3579999999973
No 307
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=96.44 E-value=0.0015 Score=74.29 Aligned_cols=35 Identities=31% Similarity=0.871 Sum_probs=31.6
Q ss_pred CCCCCCcccC-CCCCeEecCCCCCCCCCCCCCCCCCcccc
Q psy14257 94 ACEPHEFDCQ-DVLRTCIPKALVCDGEPACFNGEDEMFCD 132 (841)
Q Consensus 94 ~C~~~~~~C~-~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~ 132 (841)
.| .+|+|. + +.||+..++|||..||.|++||..|.
T Consensus 67 ~c--~~f~C~~~--g~Ci~~~~~Cdg~~dC~d~sdE~~c~ 102 (537)
T 3ojy_B 67 RC--EGFVCAQT--GRCVNRRLLCNGDNDCGDQSDEANCR 102 (537)
T ss_dssp CC--SSEECTTT--CCEECGGGTTSSSCCSSSSCTTSSCS
T ss_pred CC--CccCcCCC--CcEeeccccCCCCCCCCCccccccCC
Confidence 46 689998 6 99999999999999999999998773
No 308
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.39 E-value=1.2 Score=46.62 Aligned_cols=268 Identities=9% Similarity=-0.002 Sum_probs=147.3
Q ss_pred ceEEEEecCCCcEEEEccCCceEEE--EecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRT--LIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT 490 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~--l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~ 490 (841)
+.+.++-+..+.|.+.+++...... .+.........+++.+....|.-.. . ...|..-++........+.
T Consensus 48 ~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s-~--D~~i~lWd~~~~~~~~~~~----- 119 (321)
T 3ow8_A 48 SETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS-L--DAHIRLWDLENGKQIKSID----- 119 (321)
T ss_dssp -CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-T--TSEEEEEETTTTEEEEEEE-----
T ss_pred CCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-C--CCcEEEEECCCCCEEEEEe-----
Confidence 4566666667788888776543221 2333345567889988755554433 3 4677777775433322233
Q ss_pred CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCC
Q psy14257 491 SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 491 ~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g 569 (841)
..-.....+++.+.+..|. +-...+.|...++........+... -.....+++. ++.+.++-...+.|...+..++
T Consensus 120 ~~~~~~~~~~~spdg~~l~-~g~~dg~v~i~~~~~~~~~~~~~~~--~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~ 196 (321)
T 3ow8_A 120 AGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGVESGKKEYSLDTR--GKFILSIAYSPDGKYLASGAIDGIINIFDIATG 196 (321)
T ss_dssp CCTTCCCCEEECTTSSEEE-EECTTSEEEEEETTTCSEEEEEECS--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred CCCccEEEEEECCCCCEEE-EEcCCCcEEEEEcCCCceeEEecCC--CceEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 2333456789987666555 4455678888888765444333322 1234567763 3555555555677777776665
Q ss_pred cceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeec-CCeEE
Q psy14257 570 SDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIR 648 (841)
Q Consensus 570 ~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~ 648 (841)
+....+.... .... ..+..|++ .+|+.+. ...|+
T Consensus 197 ~~~~~~~~h~--------------------~~v~----------~l~~spd~---------------~~l~s~s~dg~i~ 231 (321)
T 3ow8_A 197 KLLHTLEGHA--------------------MPIR----------SLTFSPDS---------------QLLVTASDDGYIK 231 (321)
T ss_dssp EEEEEECCCS--------------------SCCC----------EEEECTTS---------------CEEEEECTTSCEE
T ss_pred cEEEEEcccC--------------------Ccee----------EEEEcCCC---------------CEEEEEcCCCeEE
Confidence 5433322110 0000 01111222 2333332 33466
Q ss_pred EEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCce
Q psy14257 649 GVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQ 728 (841)
Q Consensus 649 ~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (841)
..++..... ...+ ......+..|+|.|....|+-+. ..++|+..++....
T Consensus 232 iwd~~~~~~--~~~~-~~h~~~v~~~~~sp~~~~l~s~s-~D~~v~iwd~~~~~-------------------------- 281 (321)
T 3ow8_A 232 IYDVQHANL--AGTL-SGHASWVLNVAFCPDDTHFVSSS-SDKSVKVWDVGTRT-------------------------- 281 (321)
T ss_dssp EEETTTCCE--EEEE-CCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE--------------------------
T ss_pred EEECCCcce--eEEE-cCCCCceEEEEECCCCCEEEEEe-CCCcEEEEeCCCCE--------------------------
Confidence 556543321 1111 11223467899999887776555 67889988886544
Q ss_pred EEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEec
Q psy14257 729 IQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNL 769 (841)
Q Consensus 729 ~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l 769 (841)
....+......+.+|++.+.++.|.-+ ...++|.+.++
T Consensus 282 ~~~~~~~h~~~v~~v~~s~~g~~l~s~---~~d~~i~vwd~ 319 (321)
T 3ow8_A 282 CVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYDC 319 (321)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE---ETTCCEEEEEC
T ss_pred EEEEEcCCCCcEEEEEECCCCCEEEEE---eCCCeEEEEeC
Confidence 222233345678889998877766655 24577887764
No 309
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.35 E-value=0.69 Score=48.91 Aligned_cols=246 Identities=9% Similarity=-0.011 Sum_probs=123.5
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
.+.++.|.... . +..+-..++.|...++.++.. .....+...-.....+++.+..+.-+++-. ..++.
T Consensus 13 ~v~~~~~s~~~-~--~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~--------~~dg~ 80 (379)
T 3jrp_A 13 LIHDAVLDYYG-K--RLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILASC--------SYDGK 80 (379)
T ss_dssp CEEEEEECSSS-S--EEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEECCGGGCSEEEEE--------ETTSC
T ss_pred cEEEEEEcCCC-C--EEEEEECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEeCCCCCCCEEEEe--------ccCCE
Confidence 34566666542 2 344445567777777664321 111122222223344555432112233222 23567
Q ss_pred EEEEccCCCccccc--cccCcCCCceEEEEcc--CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCC
Q psy14257 330 IEKAGMHGENRSPL--VTKNIQWPSSLVIDYN--QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRP 405 (841)
Q Consensus 330 I~~~~~dG~~~~~l--~~~~~~~P~glavD~~--~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~ 405 (841)
|..++++......+ ....-.....+++.+. +..|+.+ ...+.|...++............. .... .
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~--~~~~-------v 150 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDA--HAIG-------V 150 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEEC--CTTC-------E
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecC--CCCc-------e
Confidence 88888765432222 2223445678888887 4555444 556788888887653221111110 0000 0
Q ss_pred Cccccc--------------cceEEEEecCCCcEEEEccCCc-eE---EEEecCCCCCceeEEEcCC---CCeEEEEecC
Q psy14257 406 EDNLWI--------------GKNLYWVESNLDQIEVAKLSGQ-FR---RTLIAGDMESPRAIALDPR---FGLLFWTDWD 464 (841)
Q Consensus 406 ~avdw~--------------~~~LY~tD~~~~~I~v~~~~G~-~~---~~l~~~~l~~P~giavd~~---~g~Ly~td~~ 464 (841)
..+.|. .+.++++-...+.|.+.++... .. ...+.........|+++|. ..+|+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~- 229 (379)
T 3jrp_A 151 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ- 229 (379)
T ss_dssp EEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET-
T ss_pred EEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeC-
Confidence 012222 2566666667788999887632 21 1122233456789999998 445544443
Q ss_pred CCCCeEEEecCCCCC---cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 465 SKAPRIERCSMSGEH---RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 465 ~~~~~I~r~~ldG~~---~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
.+.|...+++... ...+.. ....-.....+++++.+..|+.+.. .+.|...+++
T Consensus 230 --dg~i~iwd~~~~~~~~~~~~~~---~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 230 --DRTCIIWTQDNEQGPWKKTLLK---EEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp --TSCEEEEEESSTTSCCEEEESS---SSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred --CCEEEEEeCCCCCccceeeeec---cccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 3555555554332 122211 0012234578889877777766554 5667666655
No 310
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.30 E-value=1.5 Score=46.77 Aligned_cols=300 Identities=10% Similarity=0.061 Sum_probs=153.0
Q ss_pred CCCceEEEEc-cCCEEEEEeCCCCeEEEEEecCCccEEEEeeee---ecCCCccccCCCCCCccccc--cceEEEEecCC
Q psy14257 349 QWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSERTVSFNLEV---LGSDSRVGIPNCRPEDNLWI--GKNLYWVESNL 422 (841)
Q Consensus 349 ~~P~glavD~-~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~---~~~~~~~~i~~~~~~avdw~--~~~LY~tD~~~ 422 (841)
.....|++.+ .++.| ++-...+.|...+++.......+.... ...... ........++.|. ++.++++-...
T Consensus 44 ~~v~~~~~s~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~s~~~d 121 (408)
T 4a11_B 44 GGINTLDIEPVEGRYM-LSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHP-DVHRYSVETVQWYPHDTGMFTSSSFD 121 (408)
T ss_dssp SCEEEEEECTTTCCEE-EEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCT-TCCSSCEEEEEECTTCTTCEEEEETT
T ss_pred CcEEEEEEecCCCCEE-EEEcCCCeEEEEECCCCcccceEecccccccccccc-ccCCCcEEEEEEccCCCcEEEEEeCC
Confidence 3456788887 54444 444556788888887654332221110 000000 0000011123333 35566676677
Q ss_pred CcEEEEccCCceEEEEecCCCCCceeEEEcCCCC---eEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeE
Q psy14257 423 DQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFG---LLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGL 499 (841)
Q Consensus 423 ~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g---~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~gl 499 (841)
+.|.+.+++......... .......+++.+... +|+... . .+.|...++.......... ..-.....+
T Consensus 122 ~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~v~~~d~~~~~~~~~~~-----~~~~~v~~~ 192 (408)
T 4a11_B 122 KTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGT-R--GPKVQLCDLKSGSCSHILQ-----GHRQEILAV 192 (408)
T ss_dssp SEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEE-S--SSSEEEEESSSSCCCEEEC-----CCCSCEEEE
T ss_pred CeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEc-C--CCeEEEEeCCCcceeeeec-----CCCCcEEEE
Confidence 899999988665444333 234567788877533 444444 3 4677777776433322222 233456789
Q ss_pred EEeccCCEEEEEeCCCCeEEEEEcCCCe--eEEEEcC------------CCCCCcceEEEEe-cCeEEEEeCCCCeEEEE
Q psy14257 500 TLDYQLTRIYWIDAKSDSIHTVTYDGKD--HHVVLSN------------HDSLTHPFAIALF-ENHVYWTDWRTNSVIRA 564 (841)
Q Consensus 500 alD~~~~~LYw~d~~~~~I~~~~~dG~~--~~~i~~~------------~~~l~~P~gla~~-~~~lY~td~~~~~i~~~ 564 (841)
++.+.+..|+++-...+.|...++.... ...+... .........+++. ++..+++-...+.|...
T Consensus 193 ~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 193 SWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 9988777666666667888888886532 1111000 0011224566664 34444444445666666
Q ss_pred eccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecC
Q psy14257 565 NKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRP 644 (841)
Q Consensus 565 ~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~ 644 (841)
+..+++........ .+.... ....+.. ..+ ....+++.+..
T Consensus 273 d~~~~~~~~~~~~~---------------~~~~~~----------~~~~~~~--------~~~------~~~~~~~~~~~ 313 (408)
T 4a11_B 273 NSSNGENTLVNYGK---------------VCNNSK----------KGLKFTV--------SCG------CSSEFVFVPYG 313 (408)
T ss_dssp ETTTCCBCCCCCCC---------------CCCCCS----------SCCCCEE--------CCS------SSSCEEEEEET
T ss_pred ECCCCccceecccc---------------cccccc----------ccceeEE--------ecC------CCceEEEEecC
Confidence 65554432111100 000000 0000000 000 12344555666
Q ss_pred CeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCc
Q psy14257 645 REIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQ 702 (841)
Q Consensus 645 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~ 702 (841)
+.|+..++..... +..+. .....+.+++|.+..+.|+-.. ..+.|+..++....
T Consensus 314 ~~i~v~d~~~~~~--~~~~~-~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 314 STIAVYTVYSGEQ--ITMLK-GHYKTVDCCVFQSNFQELYSGS-RDCNILAWVPSLYE 367 (408)
T ss_dssp TEEEEEETTTCCE--EEEEC-CCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEECC--
T ss_pred CEEEEEECcCCcc--eeeec-cCCCeEEEEEEcCCCCEEEEEC-CCCeEEEEeCCCCC
Confidence 7777777654321 11111 1224578899999888877665 67889988887644
No 311
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.28 E-value=2.4 Score=48.91 Aligned_cols=520 Identities=9% Similarity=0.003 Sum_probs=238.6
Q ss_pred CCeEEeccCcccccccccccc-EEEEeccccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCC
Q psy14257 220 SPFVIFSNRHELRGVDLRTFN-VIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLST 298 (841)
Q Consensus 220 ~p~ll~s~~~~I~~~~~~~~~-~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~ 298 (841)
...++++..+.|+..++.... ...+......+.++.|.+. +. +..+-...+.|...++..+.. .....+...-..
T Consensus 30 g~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spd-g~--~lasg~~d~~v~lWd~~~~~~-~~~~~~~~~~~~ 105 (611)
T 1nr0_A 30 GDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS-GY--YCASGDVHGNVRIWDTTQTTH-ILKTTIPVFSGP 105 (611)
T ss_dssp SSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTT-SS--EEEEEETTSEEEEEESSSTTC-CEEEEEECSSSC
T ss_pred CCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCC-Cc--EEEEEeCCCCEEEeECCCCcc-eeeEeecccCCc
Confidence 345555555555555554332 2233222334667778765 33 455555677787777643321 112222222234
Q ss_pred ccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEe
Q psy14257 299 AEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 378 (841)
Q Consensus 299 p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~l 378 (841)
...+++++.++.+. -+..+ ....++|..++. |+....+ ...-.....+++.+.+..++.+-...++|...+.
T Consensus 106 v~~v~fs~dg~~l~--~~~~~----~~~~~~v~~wd~-~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~ 177 (611)
T 1nr0_A 106 VKDISWDSESKRIA--AVGEG----RERFGHVFLFDT-GTSNGNL-TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEG 177 (611)
T ss_dssp EEEEEECTTSCEEE--EEECC----SSCSEEEEETTT-CCBCBCC-CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEET
T ss_pred eEEEEECCCCCEEE--EEECC----CCceeEEEEeeC-CCCccee-cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEEC
Confidence 56677776553222 11110 011234555542 3322222 2233456678888777666666667777777765
Q ss_pred cCCccEEEEeeeeecCCCccccCCCCCCccccc-cceEEEEecCCCcEEEEccC-CceEEEEec------CCCCCceeEE
Q psy14257 379 DGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIEVAKLS-GQFRRTLIA------GDMESPRAIA 450 (841)
Q Consensus 379 dG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~v~~~~-G~~~~~l~~------~~l~~P~gia 450 (841)
........+.. ....+ .++.|. .++++.+-...+.|.+.++. |+...++.. .......+++
T Consensus 178 ~~~~~~~~l~~----H~~~V-------~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~ 246 (611)
T 1nr0_A 178 PPFKFKSTFGE----HTKFV-------HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLT 246 (611)
T ss_dssp TTBEEEEEECC----CSSCE-------EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEE
T ss_pred CCCeEeeeecc----ccCce-------EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEE
Confidence 43221111110 00000 011111 15666777777889998864 555444422 2334678999
Q ss_pred EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEE
Q psy14257 451 LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHV 530 (841)
Q Consensus 451 vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~ 530 (841)
++|...+|.-.. . ...|..-++........+... ........++.. .... +++-...+.|...++.......
T Consensus 247 ~spdg~~l~s~s-~--D~~v~lWd~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~-l~s~s~d~~i~~~~~~~~~~~~ 318 (611)
T 1nr0_A 247 WSPDGTKIASAS-A--DKTIKIWNVATLKVEKTIPVG--TRIEDQQLGIIW--TKQA-LVSISANGFINFVNPELGSIDQ 318 (611)
T ss_dssp ECTTSSEEEEEE-T--TSEEEEEETTTTEEEEEEECC--SSGGGCEEEEEE--CSSC-EEEEETTCCEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEe-C--CCeEEEEeCCCCceeeeecCC--CCccceeEEEEE--cCCE-EEEEeCCCcEEEEeCCCCCcce
Confidence 999755554443 3 456666666432221111100 000111233333 2333 3344445677777776654433
Q ss_pred EEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCC-CceeccCCcccCCCCCCCCCCcccccc
Q psy14257 531 VLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQ-PFIYVNGVVKKSPCEMNNGNCSHLCLI 608 (841)
Q Consensus 531 i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~-p~~~h~qp~~~n~C~~~ng~Cs~lC~~ 608 (841)
....+ .....++++. ++...++-...+.|...+..++.....+...... ...+...+...-...... ..+-+.
T Consensus 319 ~~~gh--~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d---~~v~~w 393 (611)
T 1nr0_A 319 VRYGH--NKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWD---DHLKVV 393 (611)
T ss_dssp EECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETT---TEEEEE
T ss_pred EEcCC--CCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcC---CceEEe
Confidence 33332 2334667773 3444455555677777776555432221100000 000000000000000000 000000
Q ss_pred CCCCceeeeCCCC--ceeecCCCcc--cccCceeEEeecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEE
Q psy14257 609 GMNGTYKCQCPHV--MKLMSDNKTC--QVADSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIY 684 (841)
Q Consensus 609 ~~~~~~~C~Cp~g--~~l~~d~~tC--~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iy 684 (841)
...+. .+.-... ..+.. ...+ ..+...+++.+..+.+..... . .+..++ ....+.+++|.|..+.|.
T Consensus 394 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~s~dg~~~~~~~~~~v~~~~~--~---~~~~~~--~~~~v~~va~spdg~~la 464 (611)
T 1nr0_A 394 PAGGS-GVDSSKAVANKLSS-QPLGLAVSADGDIAVAACYKHIAIYSH--G---KLTEVP--ISYNSSCVALSNDKQFVA 464 (611)
T ss_dssp CSSSS-SSCTTSCCEEECSS-CEEEEEECTTSSCEEEEESSEEEEEET--T---EEEEEE--CSSCEEEEEECTTSCEEE
T ss_pred ecCCc-cccccceeeeecCC-CCcEEEEeCCCcEEEEEeCceEEEEeC--C---ceeeee--cCCCceEEEEeCCCCEEE
Confidence 00000 0000000 00000 0000 001112334444444443331 1 011122 123567899999887776
Q ss_pred EEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeE
Q psy14257 685 WTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKI 764 (841)
Q Consensus 685 w~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I 764 (841)
... ..++|+..++.+..... ... ......+..|++.+.++.|.-+. ..++|
T Consensus 465 sgs-~D~~v~lwd~~~~~~~~-----------------------~~~--~~h~~~v~~v~fspdg~~las~s---~d~~v 515 (611)
T 1nr0_A 465 VGG-QDSKVHVYKLSGASVSE-----------------------VKT--IVHPAEITSVAFSNNGAFLVATD---QSRKV 515 (611)
T ss_dssp EEE-TTSEEEEEEEETTEEEE-----------------------EEE--EECSSCEEEEEECTTSSEEEEEE---TTSCE
T ss_pred EeC-CCCeEEEEEccCCceee-----------------------eec--cCCCCceEEEEECCCCCEEEEEc---CCCCE
Confidence 665 67889888887644100 011 23445689999999988777763 46789
Q ss_pred EEEecCC--cceEE-EEc-CCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCC
Q psy14257 765 VVCNLEG--EYQTT-ILS-NESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 823 (841)
Q Consensus 765 ~v~~l~g--~~~~~-~~~-~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~ 823 (841)
.+.++.. +...+ +.. . -....++++.|...+|.-.... .+|.--+++..
T Consensus 516 ~~w~~~~~~~~~~~~~~~~H-------~~~V~~v~fspdg~~lasgs~D---~~v~lW~~~~~ 568 (611)
T 1nr0_A 516 IPYSVANNFELAHTNSWTFH-------TAKVACVSWSPDNVRLATGSLD---NSVIVWNMNKP 568 (611)
T ss_dssp EEEEGGGTTEESCCCCCCCC-------SSCEEEEEECTTSSEEEEEETT---SCEEEEETTCT
T ss_pred EEEEcCCCCceeeeeeeeec-------ccceeEEEECCCCCEEEEEECC---CcEEEEECCCc
Confidence 9998864 22111 111 1 2467889999976555443332 24555556543
No 312
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.20 E-value=0.054 Score=64.26 Aligned_cols=283 Identities=11% Similarity=-0.019 Sum_probs=136.1
Q ss_pred CCCeEEEEEecCCcccceEEEEeCC-C--CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcc---cccc
Q psy14257 271 IDDKIYNATLIGNSLSNIDVVVQTG-L--STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENR---SPLV 344 (841)
Q Consensus 271 ~~~~I~~~~~~~~~~~~~~~~~~~~-l--~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~---~~l~ 344 (841)
..+.|+..++.++. ...++... . .....+++.|.++.+.+.-..-+.. ....++.|...++++... ..+.
T Consensus 34 ~d~~i~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~-~~s~~~~i~~~d~~~g~~~~~~~l~ 109 (719)
T 1z68_A 34 ADNNIVLYNIETGQ---SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLW-RYSYTATYYIYDLSNGEFVRGNELP 109 (719)
T ss_dssp TTSCEEEEESSSCC---EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECS-SSCEEEEEEEEETTTTEECCSSCCC
T ss_pred CCCCEEEEEcCCCc---EEEEEccccccccceeeEEECCCCCeEEEEecCceeE-EeecceEEEEEECCCCccccceecC
Confidence 35667777666553 22222211 0 0245677777665444321110000 001235788898887655 4432
Q ss_pred ccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccC----------CCCCCccccccce
Q psy14257 345 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIP----------NCRPEDNLWIGKN 414 (841)
Q Consensus 345 ~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~----------~~~~~avdw~~~~ 414 (841)
.....+++.+++++|.++. .+.|+..+++++..+.+....... ....|.+ .....+....++.
T Consensus 110 ----~~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l~~~~~~~-~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 110 ----RPIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQITFNGREN-KIFNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp ----SSBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEECCCCCBTT-TEEESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred ----cccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEEecCCCcC-CeEcccccceeeeecccCcccEEECCCCCE
Confidence 3466788999888888774 468888888766554432111000 0000000 0001122223455
Q ss_pred EEEEecC---------------------------------CCcEEEEccCCceEE---EEe-----cCCCCCceeEEEcC
Q psy14257 415 LYWVESN---------------------------------LDQIEVAKLSGQFRR---TLI-----AGDMESPRAIALDP 453 (841)
Q Consensus 415 LY~tD~~---------------------------------~~~I~v~~~~G~~~~---~l~-----~~~l~~P~giavd~ 453 (841)
|+++... ...|.+.++++.... .+. .........+++.|
T Consensus 183 la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp 262 (719)
T 1z68_A 183 LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVT 262 (719)
T ss_dssp EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESS
T ss_pred EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeC
Confidence 5554321 115666666654321 111 01122346889999
Q ss_pred CCCeEEEE--ecCCCCCeEEEec----CCCCCcEEEEE---ecccCCCCC--CceeEEEeccCCEEEEE-eC--CCCeEE
Q psy14257 454 RFGLLFWT--DWDSKAPRIERCS----MSGEHRSVIVR---VDLLTSRGA--WPNGLTLDYQLTRIYWI-DA--KSDSIH 519 (841)
Q Consensus 454 ~~g~Ly~t--d~~~~~~~I~r~~----ldG~~~~~i~~---~~~~~~~~~--~P~glalD~~~~~LYw~-d~--~~~~I~ 519 (841)
+ |.+.++ +......+|+..+ +++.....+.. .. ....+. ....+++.+++++||+. .. +...|+
T Consensus 263 D-~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~ 340 (719)
T 1z68_A 263 D-ERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIH 340 (719)
T ss_dssp S-SEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEE
T ss_pred C-CeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCCeEEEEEEccCCceEEE
Confidence 8 655555 3221234688888 55432222220 00 001111 11267788777777763 22 234788
Q ss_pred EEEcCCCeeEEEEcCCCCCCcceEEEE-ecCeEEEEeCC------CCeEEEEeccCC
Q psy14257 520 TVTYDGKDHHVVLSNHDSLTHPFAIAL-FENHVYWTDWR------TNSVIRANKWNG 569 (841)
Q Consensus 520 ~~~~dG~~~~~i~~~~~~l~~P~gla~-~~~~lY~td~~------~~~i~~~~~~~g 569 (841)
.+++++...+.+...... ..++.. .++.||++... ...+++++..+|
T Consensus 341 ~~~~~~~~~~~lt~~~~~---v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 341 YIKDTVENAIQITSGKWE---AINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EESSCSTTCEECSCSSSC---EEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEECCCCceEecccCceE---EEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 888887765544322111 122222 56778887654 245666665444
No 313
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.17 E-value=2.7 Score=49.37 Aligned_cols=233 Identities=10% Similarity=0.047 Sum_probs=129.2
Q ss_pred cCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc-----CcCCCceEEEEccCCEEEEE-eCCC---CeEEEEEe
Q psy14257 308 GKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK-----NIQWPSSLVIDYNQDILYWC-DSHL---NTVESVRV 378 (841)
Q Consensus 308 ~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~-----~~~~P~glavD~~~~~lYwa-D~~~---~~I~~~~l 378 (841)
++..|.+|.+-+. .-..+.|...++.....|... ....-.++++.+++++|-++ |... ..|+..++
T Consensus 88 g~~~y~~~~~~~~-----~~~~~~r~~~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl 162 (693)
T 3iuj_A 88 GRYHYFFKNDGLQ-----NQNVLWRQQEGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDV 162 (693)
T ss_dssp TTEEEEEEECSSC-----SSCEEEEECTTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEET
T ss_pred CCEEEEEEEcCCC-----ceeEEEEeCCCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEEC
Confidence 4556666665432 223566655555433222211 12234577888888877654 4322 46888999
Q ss_pred cCCccEEEEeeeeecCCCccccCCCCCCccccc-cceEEEEecC------------CCcEEEEccCCce--EEEEecCCC
Q psy14257 379 DGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESN------------LDQIEVAKLSGQF--RRTLIAGDM 443 (841)
Q Consensus 379 dG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~------------~~~I~v~~~~G~~--~~~l~~~~l 443 (841)
+++..........-. ..+.|. ++.||++... ..+|++.++.... .+.+....-
T Consensus 163 ~tg~~~~~~~~~~k~------------~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~ 230 (693)
T 3iuj_A 163 ESKQPLETPLKDVKF------------SGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIP 230 (693)
T ss_dssp TTCSEEEEEEEEEES------------CCCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSG
T ss_pred CCCCCCccccCCcee------------ccEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCC
Confidence 877654332111100 123343 3557766433 2457777775432 223332211
Q ss_pred ---CCceeEEEcCCCCeEEEEecCC-CCCeEEEecCCCC--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCC---
Q psy14257 444 ---ESPRAIALDPRFGLLFWTDWDS-KAPRIERCSMSGE--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK--- 514 (841)
Q Consensus 444 ---~~P~giavd~~~g~Ly~td~~~-~~~~I~r~~ldG~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~--- 514 (841)
..-.+++++|...+|+++.... ....|+..++++. ..+.+.. ....-... +++.+++||+....
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~------~~~~~~~~-~~~~g~~l~~~t~~~~~ 303 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQG------DLDADVSL-VDNKGSTLYLLTNRDAP 303 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEEC------SSSSCEEE-EEEETTEEEEEECTTCT
T ss_pred CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeC------CCCceEEE-EeccCCEEEEEECCCCC
Confidence 1235788999988888876432 2358999998754 3344432 11111111 55667888876532
Q ss_pred CCeEEEEEcCCCee---EEEEcCCCCCCcceEEEEecCeEEEEeCCCC--eEEEEecc
Q psy14257 515 SDSIHTVTYDGKDH---HVVLSNHDSLTHPFAIALFENHVYWTDWRTN--SVIRANKW 567 (841)
Q Consensus 515 ~~~I~~~~~dG~~~---~~i~~~~~~l~~P~gla~~~~~lY~td~~~~--~i~~~~~~ 567 (841)
+.+|.++++++... +.+...... .. +++.++++|+++....+ .|..++..
T Consensus 304 ~~~l~~~d~~~~~~~~~~~l~~~~~~--~~-~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 304 NRRLVTVDAANPGPAHWRDLIPERQQ--VL-TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp TCEEEEEETTSCCGGGCEEEECCCSS--CE-EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred CCEEEEEeCCCCCccccEEEecCCCC--EE-EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 46999999987554 555544321 22 77788899888765443 56666544
No 314
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.16 E-value=0.003 Score=50.67 Aligned_cols=38 Identities=16% Similarity=0.309 Sum_probs=24.9
Q ss_pred ccccccCCCCC--CCcccCCCCcEEe-cCCCceecCCCCcc
Q psy14257 132 DEKQCLRSDCH--HDCYNTPEGFMCV-CPRDMYLQPDLITC 169 (841)
Q Consensus 132 ~eC~~~~~~C~--~~C~~~~g~~~C~-C~~Gy~l~~d~~~C 169 (841)
+||....+.|. +.|+|++|+|+|. |..||.+..++..+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~ 44 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGP 44 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSC
T ss_pred ccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCcc
Confidence 45654455674 3789999999997 44667665555443
No 315
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.96 Score=47.78 Aligned_cols=230 Identities=12% Similarity=0.054 Sum_probs=115.6
Q ss_pred CCCEEEEccCCCccccc--cccCcCCCceEEEEcc--CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCC
Q psy14257 327 DGGIEKAGMHGENRSPL--VTKNIQWPSSLVIDYN--QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPN 402 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l--~~~~~~~P~glavD~~--~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~ 402 (841)
++.|..+++++.....+ ....-.....|++.+. ++.|+.+. ..+.|...+++......+...... ...
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~--~~~----- 103 (379)
T 3jrp_A 32 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-YDGKVLIWKEENGRWSQIAVHAVH--SAS----- 103 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSCEEEEEEETTEEEEEEEECCC--SSC-----
T ss_pred CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-cCCEEEEEEcCCCceeEeeeecCC--Ccc-----
Confidence 34566666543222222 1122234456777655 45555444 467888888876643322221110 000
Q ss_pred CCCCcccccc---ceEEEEecCCCcEEEEccCCc--eEEEEecCCCCCceeEEEcCC------------CCeEEEEecCC
Q psy14257 403 CRPEDNLWIG---KNLYWVESNLDQIEVAKLSGQ--FRRTLIAGDMESPRAIALDPR------------FGLLFWTDWDS 465 (841)
Q Consensus 403 ~~~~avdw~~---~~LY~tD~~~~~I~v~~~~G~--~~~~l~~~~l~~P~giavd~~------------~g~Ly~td~~~ 465 (841)
..++.|.. +.++++-...+.|.+.++... .....+.........++++|. ++.++++-..
T Consensus 104 --v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~- 180 (379)
T 3jrp_A 104 --VNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA- 180 (379)
T ss_dssp --EEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET-
T ss_pred --eEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC-
Confidence 01233322 345555566788998888654 222233334456788999984 3444444433
Q ss_pred CCCeEEEecCCCCCc-EEEE-EecccCCCCCCceeEEEeccC--CEEEEEeCCCCeEEEEEcCCCe---eEEEEcCCCCC
Q psy14257 466 KAPRIERCSMSGEHR-SVIV-RVDLLTSRGAWPNGLTLDYQL--TRIYWIDAKSDSIHTVTYDGKD---HHVVLSNHDSL 538 (841)
Q Consensus 466 ~~~~I~r~~ldG~~~-~~i~-~~~~~~~~~~~P~glalD~~~--~~LYw~d~~~~~I~~~~~dG~~---~~~i~~~~~~l 538 (841)
.+.|...++..... ..+. .. ...-.....+++.+.. ++++.+-...+.|...++.... ...+.......
T Consensus 181 -dg~i~i~d~~~~~~~~~~~~~~---~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 256 (379)
T 3jrp_A 181 -DNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFP 256 (379)
T ss_dssp -TSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCS
T ss_pred -CCeEEEEEecCCCcceeeEEEE---ecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCC
Confidence 35666666643322 2222 21 0223456789998763 4555555556788888887642 22333221112
Q ss_pred CcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 539 THPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 539 ~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
.....+++. ++.++++-...+.|...+...+..
T Consensus 257 ~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~ 290 (379)
T 3jrp_A 257 DVLWRASWSLSGNVLALSGGDNKVTLWKENLEGK 290 (379)
T ss_dssp SCEEEEEECSSSCCEEEEESSSSEEEEEEEETTE
T ss_pred CcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCc
Confidence 234566763 344333333356666666544433
No 316
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.09 E-value=1.7 Score=46.27 Aligned_cols=121 Identities=7% Similarity=-0.006 Sum_probs=56.5
Q ss_pred CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEec-cCCEEEEEeCCCCeEEEEE
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDY-QLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~-~~~~LYw~d~~~~~I~~~~ 522 (841)
.....++++|...+|+.... .+.|...++.............. .....+..+.+.. ....+.++ ...+.|...+
T Consensus 246 ~~v~~~~~~~~~~~l~~~~~---dg~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~d 320 (408)
T 4a11_B 246 GKVNGLCFTSDGLHLLTVGT---DNRMRLWNSSNGENTLVNYGKVC-NNSKKGLKFTVSCGCSSEFVFV-PYGSTIAVYT 320 (408)
T ss_dssp SCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCBCCCCCCCCC-CCCSSCCCCEECCSSSSCEEEE-EETTEEEEEE
T ss_pred CceeEEEEcCCCCEEEEecC---CCeEEEEECCCCccceecccccc-ccccccceeEEecCCCceEEEE-ecCCEEEEEE
Confidence 45678999987666666553 35676666654322111110000 0001111111111 12233333 2246777777
Q ss_pred cCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 523 YDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 523 ~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
+........+..+ ......+++. ++.++++-...+.|...+..+++.
T Consensus 321 ~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 321 VYSGEQITMLKGH--YKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp TTTCCEEEEECCC--SSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred CcCCcceeeeccC--CCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 6654443333322 2334677774 345555655567777777655543
No 317
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.08 E-value=2 Score=46.08 Aligned_cols=291 Identities=11% Similarity=-0.013 Sum_probs=149.3
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.+++|.+.. . +..+-..++.|...++..+. ....+.........+++.+.++ +++- ...++
T Consensus 67 ~~V~~~~~sp~~-~--~l~s~s~D~~v~iWd~~~~~---~~~~~~~h~~~v~~~~~s~~g~--~las--------~~~d~ 130 (380)
T 3iz6_a 67 GKVYSLDWTPEK-N--WIVSASQDGRLIVWNALTSQ---KTHAIKLHCPWVMECAFAPNGQ--SVAC--------GGLDS 130 (380)
T ss_dssp SCEEEEEECTTS-S--CEEEEETTSEEEEEETTTTE---EEEEEECCCTTCCCCEECTTSS--EEEE--------CCSSS
T ss_pred cEEEEEEEcCCC-C--EEEEEeCCCeEEEEECCCCc---cceEEecCCCCEEEEEECCCCC--EEEE--------eeCCC
Confidence 346678887753 3 45565667788777765543 2223333334456677776542 2221 22345
Q ss_pred CEEEEccCCCc-------cccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeee-cCCCcccc
Q psy14257 329 GIEKAGMHGEN-------RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVL-GSDSRVGI 400 (841)
Q Consensus 329 ~I~~~~~dG~~-------~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~-~~~~~~~i 400 (841)
.|..+++.... ........-.....+++.+..+..+++-...+.|...++........+..... +...
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~---- 206 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTA---- 206 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCS----
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCcc----
Confidence 66666654211 01111112223344555555555555666677787777765444333211100 0000
Q ss_pred CCCCCCccc--cccceEEEEecCCCcEEEEccC-C-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC
Q psy14257 401 PNCRPEDNL--WIGKNLYWVESNLDQIEVAKLS-G-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS 476 (841)
Q Consensus 401 ~~~~~~avd--w~~~~LY~tD~~~~~I~v~~~~-G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld 476 (841)
....+. ..+++++++-...+.|.+.++. + ....++ .........|+++|...+ +.+-.. .+.|...++.
T Consensus 207 ---~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~-l~s~s~--D~~i~lwd~~ 279 (380)
T 3iz6_a 207 ---DVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQR-FGTGSD--DGTCRLFDMR 279 (380)
T ss_dssp ---CEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSE-EEEECS--SSCEEEEETT
T ss_pred ---CeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCe-EEEEcC--CCeEEEEECC
Confidence 001112 2247788888788899999885 2 333333 333456789999997544 455433 4667777765
Q ss_pred CCCcEEEEEeccc--CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee-EEEEcC-CCCCCcceEEEEe-cCeE
Q psy14257 477 GEHRSVIVRVDLL--TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH-HVVLSN-HDSLTHPFAIALF-ENHV 551 (841)
Q Consensus 477 G~~~~~i~~~~~~--~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~-~~i~~~-~~~l~~P~gla~~-~~~l 551 (841)
............. .........+++.+.+..|+ +-...+.|...++..... ..+... ...-.....|++. ++.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~-~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 280 TGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF-AGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp TTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE-EECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CCcEEEEecccccccccccCceEEEEECCCCCEEE-EEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 4333222221000 01122357899987655554 555578899888765433 333111 0011223567773 4555
Q ss_pred EEEeCCCCeEEEEecc
Q psy14257 552 YWTDWRTNSVIRANKW 567 (841)
Q Consensus 552 Y~td~~~~~i~~~~~~ 567 (841)
+++-...+.|...+..
T Consensus 359 l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 359 LCTGSWDKNLKIWAFS 374 (380)
T ss_dssp EEEECTTSCEEEEECC
T ss_pred EEEeeCCCCEEEEecC
Confidence 5665556666655543
No 318
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.05 E-value=0.81 Score=53.89 Aligned_cols=236 Identities=9% Similarity=0.060 Sum_probs=133.0
Q ss_pred eecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccC-c-----CCCceEEEEccCCEEEEEeCC----CCeEEE
Q psy14257 306 WIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKN-I-----QWPSSLVIDYNQDILYWCDSH----LNTVES 375 (841)
Q Consensus 306 ~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~-~-----~~P~glavD~~~~~lYwaD~~----~~~I~~ 375 (841)
+.++.+|+++.+.+ ...+.|++...+|...++|...+ + ..-.++++.+++++|.++-.. ...|+.
T Consensus 77 ~dG~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v 151 (695)
T 2bkl_A 77 RRNGRFFYVRTHKD-----KEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHV 151 (695)
T ss_dssp EETTEEEEEEECTT-----CSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEE
T ss_pred EECCEEEEEEEcCC-----CeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEE
Confidence 44666776665433 12457888887766666554321 1 134578899998888776432 257999
Q ss_pred EEecCCccEEEEeeeeecCCCccccCCCCCCcccc--ccceEEEEecC------------CCcEEEEccCCce--EEEEe
Q psy14257 376 VRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW--IGKNLYWVESN------------LDQIEVAKLSGQF--RRTLI 439 (841)
Q Consensus 376 ~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw--~~~~LY~tD~~------------~~~I~v~~~~G~~--~~~l~ 439 (841)
.+++++..... .. +.......+.| .+..||++... ..+|++.++.+.. .+.+.
T Consensus 152 ~dl~tg~~~~~---~~--------~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~ 220 (695)
T 2bkl_A 152 IDVDSGEWSKV---DV--------IEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH 220 (695)
T ss_dssp EETTTCCBCSS---CC--------BSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE
T ss_pred EECCCCCCcCC---cc--------cCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE
Confidence 99987654200 00 00000013444 34567776542 2348888887543 22222
Q ss_pred cCC--CCCceeEEEcCCCCeEEEEecCC-CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC---
Q psy14257 440 AGD--MESPRAIALDPRFGLLFWTDWDS-KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA--- 513 (841)
Q Consensus 440 ~~~--l~~P~giavd~~~g~Ly~td~~~-~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~--- 513 (841)
... ...-.+++++|++.+|+++.... ....|+..+..+...+.+... ........ .+.++ ||+...
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~------~~~~~~~~-~~~g~-l~~~s~~~~ 292 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG------VGAKYEVH-AWKDR-FYVLTDEGA 292 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC------SSCCEEEE-EETTE-EEEEECTTC
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecC------CCceEEEE-ecCCc-EEEEECCCC
Confidence 221 12345889999988888876542 245788887655555555541 11222232 24455 777543
Q ss_pred CCCeEEEEEcCCCee---EEEEcCCCCCCcceEEEEecCeEEEEeCCCC--eEEEEec
Q psy14257 514 KSDSIHTVTYDGKDH---HVVLSNHDSLTHPFAIALFENHVYWTDWRTN--SVIRANK 566 (841)
Q Consensus 514 ~~~~I~~~~~dG~~~---~~i~~~~~~l~~P~gla~~~~~lY~td~~~~--~i~~~~~ 566 (841)
.+.+|..+++++... +.++.... -....++++++++|+++-...+ +|..++.
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 293 PRQRVFEVDPAKPARASWKEIVPEDS-SASLLSVSIVGGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp TTCEEEEEBTTBCSGGGCEEEECCCS-SCEEEEEEEETTEEEEEEEETTEEEEEEEET
T ss_pred CCCEEEEEeCCCCCccCCeEEecCCC-CCeEEEEEEECCEEEEEEEECCEEEEEEEeC
Confidence 357999999976542 44543321 1123567777888888765443 4445553
No 319
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.04 E-value=1.2 Score=52.38 Aligned_cols=234 Identities=13% Similarity=0.050 Sum_probs=120.8
Q ss_pred CeEEEEEecCCcccceEEEEeCC-C-----CCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccc-cccc
Q psy14257 273 DKIYNATLIGNSLSNIDVVVQTG-L-----STAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRS-PLVT 345 (841)
Q Consensus 273 ~~I~~~~~~~~~~~~~~~~~~~~-l-----~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~-~l~~ 345 (841)
..|++.+..++. .++++... + ....++++.|.++.+.+ -.+.+ ......|...++++.... ....
T Consensus 94 ~~l~~~~~~~~~---~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~-~~~~~----G~~~~~i~v~dl~tg~~~~~~~~ 165 (695)
T 2bkl_A 94 AILYWRQGESGQ---EKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAF-AQKPN----AADEAVLHVIDVDSGEWSKVDVI 165 (695)
T ss_dssp CEEEEEESTTSC---CEEEECGGGSSSSSCEEEEEEEECTTSSEEEE-EEEET----TCSCCEEEEEETTTCCBCSSCCB
T ss_pred EEEEEEcCCCCC---cEEEEchHHhccCCCEEEEEEEECCCCCEEEE-EECCC----CCceEEEEEEECCCCCCcCCccc
Confidence 457777665543 34444321 1 12345667665543332 22221 112357999998876543 1111
Q ss_pred cCcCCCceEEEEccCCEEEEEeCC------------CCeEEEEEecCCcc--EEEEeeeeecCCCccccCCCCCCccccc
Q psy14257 346 KNIQWPSSLVIDYNQDILYWCDSH------------LNTVESVRVDGSER--TVSFNLEVLGSDSRVGIPNCRPEDNLWI 411 (841)
Q Consensus 346 ~~~~~P~glavD~~~~~lYwaD~~------------~~~I~~~~ldG~~~--~~~~~~~~~~~~~~~~i~~~~~~avdw~ 411 (841)
... ...++++.++++.||++... ...|++.++.+... +.++.... ......+ .++...
T Consensus 166 ~~~-~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~-~~~~~~~------~~~SpD 237 (695)
T 2bkl_A 166 EGG-KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG-DPTTFLQ------SDLSRD 237 (695)
T ss_dssp SCC-TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC-CTTCEEE------EEECTT
T ss_pred Ccc-cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC-CCEEEEE------EEECCC
Confidence 111 12689999999999998763 23599999876653 23332110 0000000 012223
Q ss_pred cceEEEEecC---CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEE-ecCCCCCeEEEecCCCCCc---EEEE
Q psy14257 412 GKNLYWVESN---LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWT-DWDSKAPRIERCSMSGEHR---SVIV 484 (841)
Q Consensus 412 ~~~LY~tD~~---~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~t-d~~~~~~~I~r~~ldG~~~---~~i~ 484 (841)
++.|+++... ...|++.+..+...+.+... .......+. +.++ ||+. +++....+|++.++++... +.++
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~-~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGEKDFRLLVKG-VGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTCSSCEEEEEC-SSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CCEEEEEEeCCCCceEEEEEcCCCCceEEeecC-CCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEe
Confidence 3556654432 34677776644333333322 222233333 4555 5554 4443468999999976553 4554
Q ss_pred EecccCCCCCCceeEEEeccCCEEEEEeCC--CCeEEEEEcCCCeeEEE
Q psy14257 485 RVDLLTSRGAWPNGLTLDYQLTRIYWIDAK--SDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~~~~~LYw~d~~--~~~I~~~~~dG~~~~~i 531 (841)
.. ..-....++++. +++|+++-.. ..+|+.++++|...+.+
T Consensus 315 ~~----~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 315 PE----DSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTV 357 (695)
T ss_dssp CC----CSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEEC
T ss_pred cC----CCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEe
Confidence 31 112223566765 6778776543 34778888888755544
No 320
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.00 E-value=0.0025 Score=77.71 Aligned_cols=41 Identities=41% Similarity=1.017 Sum_probs=33.5
Q ss_pred CCCC-CCCCC------CCcccCCCCeEecCCCCCCCCCCcccCCCCCCCcc
Q psy14257 26 HCQD-RKCDE------SHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69 (841)
Q Consensus 26 ~C~~-~~C~~------~~~~C~~~~~Ci~~~~~Cdg~~dC~~~d~sde~~C 69 (841)
.|.. ..|+. ++|+|. +++||+..|+|||..||. |+|||.+|
T Consensus 105 ~C~~~~~Cp~~~~~C~~~F~C~-~g~ci~~~~~c~g~~dC~--d~sde~~C 152 (913)
T 3t5o_A 105 PCIPSKLCKIEEADCKNKFRCD-SGRCIARKLECNGENDCG--DNSDERDC 152 (913)
T ss_dssp ECCCSSSSCCCCCCCSSEEECT-TSCEEEGGGSSSSSCCSS--SSGGGTTC
T ss_pred ccCCccCCCccccCcccccccC-CCceEccceecCCcccCC--CccccccC
Confidence 5654 44533 569998 899999999999999999 99988765
No 321
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.94 E-value=0.0028 Score=59.95 Aligned_cols=40 Identities=30% Similarity=0.764 Sum_probs=34.3
Q ss_pred cccccc-CCCCCCCcccCCCCcEEecCCCceecCCCCcccc
Q psy14257 132 DEKQCL-RSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 132 ~eC~~~-~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
+||... ...|++.|.|++++|.|.|.+||.|..++++|++
T Consensus 118 ~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 118 NECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 578653 3579999999999999999999999999999975
No 322
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.93 E-value=2.2 Score=45.39 Aligned_cols=196 Identities=13% Similarity=0.085 Sum_probs=114.6
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEe--CCCCCccceEEeeecCceeEEEeeecCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQ--TGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSS 326 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~--~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~ 326 (841)
..+.++.|...... ++.+-..++.|...++.++. ....+. ..-.....+++.+..++ +++-. ..
T Consensus 74 ~~v~~~~~~~~~~~--~l~s~~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~-~l~s~--------~~ 139 (383)
T 3ei3_B 74 RRVTSLEWHPTHPT--TVAVGSKGGDIILWDYDVQN---KTSFIQGMGPGDAITGMKFNQFNTN-QLFVS--------SI 139 (383)
T ss_dssp SCEEEEEECSSCTT--EEEEEEBTSCEEEEETTSTT---CEEEECCCSTTCBEEEEEEETTEEE-EEEEE--------ET
T ss_pred CCEEEEEECCCCCC--EEEEEcCCCeEEEEeCCCcc---cceeeecCCcCCceeEEEeCCCCCC-EEEEE--------eC
Confidence 45678888776424 66666677888888887554 222222 12234455666542112 22221 23
Q ss_pred CCCEEEEccCCCccccccccC--cCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCC
Q psy14257 327 DGGIEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCR 404 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~~~~--~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~ 404 (841)
++.|..+++.+.....+.... -.....+++.+.+..|+.+. ..+.|...++++.....+.... ..
T Consensus 140 d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~h~-----~~------- 206 (383)
T 3ei3_B 140 RGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGLDGHEIFKEKLHK-----AK------- 206 (383)
T ss_dssp TTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEETTSCEEEEEECSS-----SC-------
T ss_pred CCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEECCCCEEEEeccCC-----Cc-------
Confidence 568888888875555443322 24567899998877766554 5578988888766444432110 00
Q ss_pred CCcccc--ccceEEEEecCCCcEEEEccCC-----ceEEEEecCCCCCceeEEEcC-CCCeEEEEecCCCCCeEEEecCC
Q psy14257 405 PEDNLW--IGKNLYWVESNLDQIEVAKLSG-----QFRRTLIAGDMESPRAIALDP-RFGLLFWTDWDSKAPRIERCSMS 476 (841)
Q Consensus 405 ~~avdw--~~~~LY~tD~~~~~I~v~~~~G-----~~~~~l~~~~l~~P~giavd~-~~g~Ly~td~~~~~~~I~r~~ld 476 (841)
..++.| .+..++++-...+.|.+.++.. .....+ ........|+++| ...+|+.+.. .+.|...++.
T Consensus 207 v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~---d~~i~iwd~~ 281 (383)
T 3ei3_B 207 VTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQ---RNEIRVYSSY 281 (383)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEES---SSEEEEEETT
T ss_pred EEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcC---CCcEEEEECC
Confidence 011222 2233677777778899998863 344444 2345788999999 6555555443 4677777775
No 323
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=95.92 E-value=1.8 Score=44.22 Aligned_cols=273 Identities=11% Similarity=0.048 Sum_probs=139.5
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
.+.++.| .. +. ++.+-..++.|...++.++. ....+...-.....+++.+.++ +++.. ..++.
T Consensus 20 ~v~~~~~-~~-~~--~l~s~~~dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~~~~~~--~l~~~--------~~dg~ 82 (313)
T 3odt_A 20 DVRDVVA-VD-DS--KVASVSRDGTVRLWSKDDQW---LGTVVYTGQGFLNSVCYDSEKE--LLLFG--------GKDTM 82 (313)
T ss_dssp CEEEEEE-EE-TT--EEEEEETTSEEEEEEESSSE---EEEEEEECSSCEEEEEEETTTT--EEEEE--------ETTSC
T ss_pred CcEEEEe-cC-CC--EEEEEEcCCcEEEEECCCCE---EEEEeecCCccEEEEEECCCCC--EEEEe--------cCCCe
Confidence 3556666 33 33 45555667788887776543 2223333344566677776442 22222 23456
Q ss_pred EEEEccCCCc-ccccc--ccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCC
Q psy14257 330 IEKAGMHGEN-RSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPE 406 (841)
Q Consensus 330 I~~~~~dG~~-~~~l~--~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~ 406 (841)
|..+++.... ...+. ...-.....+++ .++.|+ +-...+.|...+ .+.....+.. . ... ..
T Consensus 83 i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~~i~~~d-~~~~~~~~~~---~--~~~-------v~ 146 (313)
T 3odt_A 83 INGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVI-SGSWDKTAKVWK-EGSLVYNLQA---H--NAS-------VW 146 (313)
T ss_dssp EEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEE-EEETTSEEEEEE-TTEEEEEEEC---C--SSC-------EE
T ss_pred EEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEE-EEeCCCCEEEEc-CCcEEEeccc---C--CCc-------ee
Confidence 6666654321 11111 112223345555 344444 444556677666 2222111110 0 000 00
Q ss_pred ccccc--cceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEE
Q psy14257 407 DNLWI--GKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIV 484 (841)
Q Consensus 407 avdw~--~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~ 484 (841)
.+.|. .++++++-...+.|.+.+ .++....+..........+++.|. +.|+... . .+.|...++.........
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d-~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~-~--dg~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQ-NDKVIKTFSGIHNDVVRHLAVVDD-GHFISCS-N--DGLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEE-TTEEEEEECSSCSSCEEEEEEEET-TEEEEEE-T--TSEEEEEETTTCCEEEEE
T ss_pred EEEEccCCCCEEEEEECCCCEEEEe-cCceEEEEeccCcccEEEEEEcCC-CeEEEcc-C--CCeEEEEECCchhhhhhh
Confidence 11111 255555556677888887 333333433324456788999986 4444443 3 567888887643333333
Q ss_pred EecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEE
Q psy14257 485 RVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIR 563 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~ 563 (841)
. ..-.....+++.+.+ +|+. -...+.|...++........+..+ ......+++. ++.+ ++-...+.|..
T Consensus 222 ~-----~~~~~i~~~~~~~~~-~l~~-~~~dg~v~iwd~~~~~~~~~~~~~--~~~i~~~~~~~~~~~-~~~~~dg~i~i 291 (313)
T 3odt_A 222 E-----GHESFVYCIKLLPNG-DIVS-CGEDRTVRIWSKENGSLKQVITLP--AISIWSVDCMSNGDI-IVGSSDNLVRI 291 (313)
T ss_dssp E-----CCSSCEEEEEECTTS-CEEE-EETTSEEEEECTTTCCEEEEEECS--SSCEEEEEECTTSCE-EEEETTSCEEE
T ss_pred h-----cCCceEEEEEEecCC-CEEE-EecCCEEEEEECCCCceeEEEecc--CceEEEEEEccCCCE-EEEeCCCcEEE
Confidence 3 234557889998755 5554 445688999998655443333332 2234677774 3454 44445667776
Q ss_pred EeccCCc
Q psy14257 564 ANKWNGS 570 (841)
Q Consensus 564 ~~~~~g~ 570 (841)
.+..+++
T Consensus 292 w~~~~~~ 298 (313)
T 3odt_A 292 FSQEKSR 298 (313)
T ss_dssp EESCGGG
T ss_pred EeCCCCc
Confidence 6655544
No 324
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.91 E-value=2 Score=44.84 Aligned_cols=121 Identities=5% Similarity=-0.035 Sum_probs=72.6
Q ss_pred CCCCceeEEEcCCC--CeEEEEecCCCCCeEEEecCCC--CCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCe
Q psy14257 442 DMESPRAIALDPRF--GLLFWTDWDSKAPRIERCSMSG--EHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDS 517 (841)
Q Consensus 442 ~l~~P~giavd~~~--g~Ly~td~~~~~~~I~r~~ldG--~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~ 517 (841)
.-.....|+++|.. |.+.++-.. .+.|...+++. ........ ..-.....+++.+.+..|+.+. ..+.
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~-~dg~ 109 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW--ANDVRCWEVQDSGQTIPKAQQ-----MHTGPVLDVCWSDDGSKVFTAS-CDKT 109 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET--TSEEEEEEECTTSCEEEEEEE-----ECSSCEEEEEECTTSSEEEEEE-TTSE
T ss_pred CCCceEEEEEcCCCCCceEEEEECC--CCcEEEEEcCCCCceeEEEec-----cccCCEEEEEECcCCCEEEEEc-CCCc
Confidence 34567889999986 555555433 45666666653 33222232 2344568899987666666554 4678
Q ss_pred EEEEEcCCCeeEEEEcCCCCCCcceEEEE--e-cCeEEEEeCCCCeEEEEeccCCcceE
Q psy14257 518 IHTVTYDGKDHHVVLSNHDSLTHPFAIAL--F-ENHVYWTDWRTNSVIRANKWNGSDVT 573 (841)
Q Consensus 518 I~~~~~dG~~~~~i~~~~~~l~~P~gla~--~-~~~lY~td~~~~~i~~~~~~~g~~~~ 573 (841)
|...+++......+.... .....+++ . ++.++++-...+.|...+..+++...
T Consensus 110 v~iwd~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 110 AKMWDLSSNQAIQIAQHD---APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM 165 (368)
T ss_dssp EEEEETTTTEEEEEEECS---SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE
T ss_pred EEEEEcCCCCceeecccc---CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE
Confidence 999999877665544322 23466666 3 35555555556777777665554443
No 325
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.88 E-value=0.0017 Score=66.33 Aligned_cols=42 Identities=19% Similarity=0.376 Sum_probs=34.9
Q ss_pred ccccccCCCCCC--CcccCCCCcEEecCCCceecCCCCcccccccc
Q psy14257 132 DEKQCLRSDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
|||....+.|+. .|.|++|+|.|.|++||. .+|..|.++++.
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~--GnG~~C~d~d~P 49 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYT--GNGRQCVAEGSP 49 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEE--ECSSSEEETTCE
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCC--CCCCcCCCCCCC
Confidence 678765678864 799999999999999998 578899998765
No 326
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.84 E-value=2.2 Score=44.78 Aligned_cols=275 Identities=9% Similarity=-0.003 Sum_probs=135.8
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
..+.++.|... +. +..+-..++.|...++..+. .. ..+...-.....+++.+.+ -|++-. ..++
T Consensus 56 ~~v~~~~~s~d-~~--~l~s~s~Dg~v~iWd~~~~~--~~-~~~~~~~~~v~~~~~s~~~--~~l~s~--------~~d~ 119 (340)
T 1got_B 56 AKIYAMHWGTD-SR--LLLSASQDGKLIIWDSYTTN--KV-HAIPLRSSWVMTCAYAPSG--NYVACG--------GLDN 119 (340)
T ss_dssp SCEEEEEECTT-SS--EEEEEETTTEEEEEETTTCC--EE-EEEECSSSCEEEEEECTTS--SEEEEE--------ETTC
T ss_pred CceEEEEECCC-CC--EEEEEeCCCcEEEEECCCCC--cc-eEeecCCccEEEEEECCCC--CEEEEE--------eCCC
Confidence 34667777654 33 55666667788777765443 11 2222222234445555433 233211 1245
Q ss_pred CEEEEccCCCccc-cc---cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCC
Q psy14257 329 GIEKAGMHGENRS-PL---VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCR 404 (841)
Q Consensus 329 ~I~~~~~dG~~~~-~l---~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~ 404 (841)
.|..+++...... .+ ..........+++... ++| ++-...+.|...++........+.. ....
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l-~s~s~d~~i~~wd~~~~~~~~~~~~----h~~~------- 186 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQI-VTSSGDTTCALWDIETGQQTTTFTG----HTGD------- 186 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEE-EEEETTSCEEEEETTTTEEEEEECC----CSSC-------
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCC-CcE-EEEECCCcEEEEECCCCcEEEEEcC----CCCc-------
Confidence 6666665432111 11 1112223334555433 343 3444566777777654433222110 0000
Q ss_pred CCccccc-cceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEE
Q psy14257 405 PEDNLWI-GKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVI 483 (841)
Q Consensus 405 ~~avdw~-~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i 483 (841)
..++.|. .++++++-...+.|.+.++........+.........|+++|...+|.... . .+.|...++........
T Consensus 187 v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s-~--d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 187 VMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS-D--DATCRLFDLRADQELMT 263 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE-T--TSCEEEEETTTTEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc-C--CCcEEEEECCCCcEEEE
Confidence 0011221 256677777778999999865433333333445678999999866555444 3 45677777654322222
Q ss_pred EEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeE
Q psy14257 484 VRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSV 561 (841)
Q Consensus 484 ~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i 561 (841)
... .........+++.+.+..|. +-...+.|...++........+..+ -.....|++. ++.++++-...+.|
T Consensus 264 ~~~---~~~~~~v~~~~~s~~g~~l~-~g~~d~~i~vwd~~~~~~~~~~~~h--~~~v~~~~~s~dg~~l~s~s~D~~i 336 (340)
T 1got_B 264 YSH---DNIICGITSVSFSKSGRLLL-AGYDDFNCNVWDALKADRAGVLAGH--DNRVSCLGVTDDGMAVATGSWDSFL 336 (340)
T ss_dssp ECC---TTCCSCEEEEEECTTSSEEE-EEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECTTSSCEEEEETTSCE
T ss_pred Ecc---CCcccceEEEEECCCCCEEE-EECCCCeEEEEEcccCcEeeEeecC--CCcEEEEEEcCCCCEEEEEcCCccE
Confidence 210 01223457788987655555 4445678998887654443333332 1233566664 34444444334444
No 327
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.84 E-value=4.5 Score=48.18 Aligned_cols=117 Identities=8% Similarity=-0.068 Sum_probs=66.4
Q ss_pred CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
...++|+.|.. |.||+...+ ..|.+.+......+.+.... ...-.....|+.| ..++||+... .+.|.+++.
T Consensus 363 ~~v~~i~~d~~-g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~d-~~g~lWigt~-~~Gl~~~~~ 434 (781)
T 3v9f_A 363 KVVSSVCDDGQ-GKLWIGTDG---GGINVFENGKRVAIYNKENR--ELLSNSVLCSLKD-SEGNLWFGTY-LGNISYYNT 434 (781)
T ss_dssp SCEEEEEECTT-SCEEEEEBS---SCEEEEETTEEEEECC-------CCCSBEEEEEEC-TTSCEEEEET-TEEEEEECS
T ss_pred cceEEEEEcCC-CCEEEEeCC---CcEEEEECCCCeEEEccCCC--CCCCcceEEEEEC-CCCCEEEEec-cCCEEEEcC
Confidence 34678888864 788877543 46888776532222111100 0112345677787 4577776543 457888887
Q ss_pred CCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCc
Q psy14257 524 DGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 524 dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
.....+.+..........+.|... ++.||++.. +.|.++++.+++
T Consensus 435 ~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 435 RLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKK 480 (781)
T ss_dssp SSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSS
T ss_pred CCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCe
Confidence 755444332211112344666665 478888765 578888876554
No 328
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=95.84 E-value=2 Score=44.26 Aligned_cols=277 Identities=12% Similarity=0.028 Sum_probs=149.6
Q ss_pred CCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 443 MESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 443 l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
.....+|+++|...+|.-+.. .+.|..-++........+. ..-.....+++.+.++.|+.+ ...+.|...+
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~---dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~-s~d~~i~vwd 83 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLY---SGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVG-SDDFRIRVFN 83 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEET---TSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEE-ETTSEEEEEE
T ss_pred CCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEE-CCCCEEEEEE
Confidence 356789999998766665553 3566666665332222222 122334677888766655544 4467899988
Q ss_pred cCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCC
Q psy14257 523 YDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGN 601 (841)
Q Consensus 523 ~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~ 601 (841)
+........+..+ -.....|++. ++.+..+-...+.|...+..++......... |
T Consensus 84 ~~~~~~~~~~~~h--~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~-------h--------------- 139 (304)
T 2ynn_A 84 YNTGEKVVDFEAH--PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG-------H--------------- 139 (304)
T ss_dssp TTTCCEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC-------C---------------
T ss_pred CCCCcEEEEEeCC--CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc-------c---------------
Confidence 8754433333322 1234677774 3555556556677777776544322211100 0
Q ss_pred CccccccCCCCceeeeCCCCceeecCCCcccccCceeEEe-ecCCeEEEEecCCCCccccceeecCCCCCceEEEEecCC
Q psy14257 602 CSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIF-SRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAAN 680 (841)
Q Consensus 602 Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~-~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~ 680 (841)
.....|.. ..++ ....|+. +....|+..++...... ..+.......+..++|.+..
T Consensus 140 ---------~~~v~~v~-----~~p~-------~~~~l~sgs~D~~v~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 196 (304)
T 2ynn_A 140 ---------EHFVMCVA-----FNPK-------DPSTFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLP 196 (304)
T ss_dssp ---------CSCEEEEE-----ECTT-------CTTEEEEEETTSEEEEEETTCSSCS--EEEECCCTTCEEEEEECCST
T ss_pred ---------CCcEEEEE-----ECCC-------CCCEEEEEeCCCeEEEEECCCCCcc--ceeccCCcCcEEEEEEEEcC
Confidence 00011111 0010 0111222 23455666666433221 11112222345677777643
Q ss_pred -CEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCC
Q psy14257 681 -KKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSP 759 (841)
Q Consensus 681 -~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~ 759 (841)
+.+..+-...++|+..++.... ....+......+..+++.+.++.|.-. .
T Consensus 197 ~~~~l~s~s~D~~i~iWd~~~~~--------------------------~~~~~~~h~~~v~~~~~~p~~~~l~s~---s 247 (304)
T 2ynn_A 197 DKPYMITASDDLTIKIWDYQTKS--------------------------CVATLEGHMSNVSFAVFHPTLPIIISG---S 247 (304)
T ss_dssp TCCEEEEEETTSEEEEEETTTTE--------------------------EEEEEECCSSCEEEEEECSSSSEEEEE---E
T ss_pred CCCEEEEEcCCCeEEEEeCCCCc--------------------------cceeeCCCCCCEEEEEECCCCCEEEEE---c
Confidence 3344444567889988887544 223344556678889999887655544 3
Q ss_pred CCCeEEEEecCCc-ceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCC
Q psy14257 760 TQSKIVVCNLEGE-YQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQ 811 (841)
Q Consensus 760 ~~~~I~v~~l~g~-~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~ 811 (841)
..++|.+.++... ..+.+... ......++++|..+.+|.+-...+
T Consensus 248 ~Dg~i~iWd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~asg~~~ 293 (304)
T 2ynn_A 248 EDGTLKIWNSSTYKVEKTLNVG-------LERSWCIATHPTGRKNYIASGFDN 293 (304)
T ss_dssp TTSCEEEEETTTCCEEEEECCS-------SSSEEEEEECTTCGGGCEEEEETT
T ss_pred CCCeEEEEECCCCceeeeccCC-------CccEEEEEECCCCCceEEEEecCC
Confidence 5688999998754 34444333 567789999998766555444443
No 329
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.77 E-value=2.1 Score=46.72 Aligned_cols=270 Identities=9% Similarity=0.005 Sum_probs=128.5
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCE
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGI 330 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I 330 (841)
+.++.++ +. .+++-..++.|...++..+. ....+...-.....++ +.+ +..+ - ...++.|
T Consensus 136 v~~~~~d---~~--~l~~g~~dg~i~iwd~~~~~---~~~~~~~h~~~v~~l~--~~~-~~l~-s--------g~~dg~i 195 (435)
T 1p22_A 136 VYCLQYD---DQ--KIVSGLRDNTIKIWDKNTLE---CKRILTGHTGSVLCLQ--YDE-RVII-T--------GSSDSTV 195 (435)
T ss_dssp EEEEECC---SS--EEEEEESSSCEEEEESSSCC---EEEEECCCSSCEEEEE--CCS-SEEE-E--------EETTSCE
T ss_pred EEEEEEC---CC--EEEEEeCCCeEEEEeCCCCe---EEEEEcCCCCcEEEEE--ECC-CEEE-E--------EcCCCeE
Confidence 4455553 22 45555666777777765443 1122222222233333 322 2222 1 1245678
Q ss_pred EEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc
Q psy14257 331 EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW 410 (841)
Q Consensus 331 ~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw 410 (841)
..+++............-.....+++ ..+ ++++-...+.|...++............ .+.... ..++.|
T Consensus 196 ~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~-------v~~~~~ 264 (435)
T 1p22_A 196 RVWDVNTGEMLNTLIHHCEAVLHLRF--NNG-MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAA-------VNVVDF 264 (435)
T ss_dssp EEEESSSCCEEEEECCCCSCEEEEEC--CTT-EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSC-------EEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEE--cCC-EEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCc-------EEEEEe
Confidence 88887533222222222222334444 344 4444456678888887654432211100 000000 113444
Q ss_pred ccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC
Q psy14257 411 IGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT 490 (841)
Q Consensus 411 ~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~ 490 (841)
.++..++-...+.|.+.++........+.........++++ ..+|+... . .+.|...++..........
T Consensus 265 -~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~-~--dg~i~iwd~~~~~~~~~~~----- 333 (435)
T 1p22_A 265 -DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGS-S--DNTIRLWDIECGACLRVLE----- 333 (435)
T ss_dssp -ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEE-T--TSCEEEEETTTCCEEEEEC-----
T ss_pred -CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEe-C--CCeEEEEECCCCCEEEEEe-----
Confidence 34455555567889999986543333333344456677775 34554444 3 4677777776333222222
Q ss_pred CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCC----------eeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCe
Q psy14257 491 SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGK----------DHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNS 560 (841)
Q Consensus 491 ~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~----------~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~ 560 (841)
..-.....+++| +..|+.+ ...+.|...++... ....+... ......+++ ++..+++-...+.
T Consensus 334 ~h~~~v~~~~~~--~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l~~-~~~~l~s~s~Dg~ 406 (435)
T 1p22_A 334 GHEELVRCIRFD--NKRIVSG-AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH---SGRVFRLQF-DEFQIVSSSHDDT 406 (435)
T ss_dssp CCSSCEEEEECC--SSEEEEE-ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC---SSCCCCEEE-CSSCEEECCSSSE
T ss_pred CCcCcEEEEEec--CCEEEEE-eCCCcEEEEECCCCCCccccccchheeeccCC---CCCeEEEEe-CCCEEEEEeCCCE
Confidence 223345566663 4555544 45678888887532 23333222 123456666 4444555556677
Q ss_pred EEEEeccCC
Q psy14257 561 VIRANKWNG 569 (841)
Q Consensus 561 i~~~~~~~g 569 (841)
|...+..++
T Consensus 407 i~iwd~~~~ 415 (435)
T 1p22_A 407 ILIWDFLND 415 (435)
T ss_dssp EEEEC----
T ss_pred EEEEECCCC
Confidence 776665443
No 330
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.72 E-value=2.5 Score=44.42 Aligned_cols=249 Identities=8% Similarity=-0.041 Sum_probs=130.5
Q ss_pred CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 444 ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 444 ~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
.....++++|...+|+.... .+.|...+++......+.... ..-.....+++.+.+..|+.+. ..+.|...++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~---d~~v~i~~~~~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~ 81 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPN---NHEVHIYEKSGNKWVQVHELK---EHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTL 81 (372)
T ss_dssp SCCCEEEECTTSSEEEEECS---SSEEEEEEEETTEEEEEEEEE---CCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeC---CCEEEEEeCCCCcEEeeeeec---CCCCcccEEEEeCCCCEEEEEc-CCCeEEEEEC
Confidence 45678999988666665533 467777777665421222110 2334568899998666666555 4578888888
Q ss_pred CCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCC
Q psy14257 524 DGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNC 602 (841)
Q Consensus 524 dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~C 602 (841)
..............-.....+++. ++.++++-...+.|...+...+........... + |
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-~---~---------------- 141 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK-P---I---------------- 141 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT-T---C----------------
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec-c---c----------------
Confidence 766433322211112345677774 344444434456666555544443222111000 0 0
Q ss_pred ccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEecCCCC--------------ccccceeec-C
Q psy14257 603 SHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDLEHPY--------------YHTIPTISI-P 666 (841)
Q Consensus 603 s~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l~~~~--------------~~~~~~~~~-~ 666 (841)
.....+.. +.++ ..+|+.+ ....|+..++.... ........+ .
T Consensus 142 --------~~~i~~~~-----~~~~--------~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (372)
T 1k8k_C 142 --------RSTVLSLD-----WHPN--------SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 200 (372)
T ss_dssp --------CSCEEEEE-----ECTT--------SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCC
T ss_pred --------CCCeeEEE-----EcCC--------CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCC
Confidence 00011110 0111 1223332 23445555542110 000011111 1
Q ss_pred CCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEe
Q psy14257 667 QVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAID 746 (841)
Q Consensus 667 ~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD 746 (841)
....+.+++|++..+.|+... ..+.|+..++.... ....+......+..|++.
T Consensus 201 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--------------------------~~~~~~~~~~~v~~~~~~ 253 (372)
T 1k8k_C 201 SCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--------------------------AVATLASETLPLLAVTFI 253 (372)
T ss_dssp CSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--------------------------EEEEEECSSCCEEEEEEE
T ss_pred CCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--------------------------eeEEEccCCCCeEEEEEe
Confidence 224578999999888887776 67889999886554 222333444567889999
Q ss_pred ecCCcEEEEecCCCCCeEEEEecCC
Q psy14257 747 WIAQNMFIAVSSPTQSKIVVCNLEG 771 (841)
Q Consensus 747 ~~~~~LYw~~~~~~~~~I~v~~l~g 771 (841)
+.++.|... ..+.|.+.++..
T Consensus 254 ~~~~~l~~~----~d~~i~i~~~~~ 274 (372)
T 1k8k_C 254 TESSLVAAG----HDCFPVLFTYDS 274 (372)
T ss_dssp ETTEEEEEE----TTSSCEEEEEET
T ss_pred cCCCEEEEE----eCCeEEEEEccC
Confidence 877644433 457788888765
No 331
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=95.69 E-value=0.0069 Score=57.24 Aligned_cols=51 Identities=24% Similarity=0.451 Sum_probs=41.7
Q ss_pred CCceecCCCCccccccccCC--CCCccCceeecCCCCceEEeecCCeeecCCCCceEe
Q psy14257 158 RDMYLQPDLITCSYLHPCEA--WGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213 (841)
Q Consensus 158 ~Gy~l~~d~~~C~~~~eC~~--~~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~ 213 (841)
.||.+. ..|.+++||.. ...|++.|.++ .++|.|.|.+||.|..++++|.+
T Consensus 106 ~GF~~~---y~~~d~~eC~~~~~~~C~~~C~n~--~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 106 TGFAAY---YVATDINECTDFVDVPCSHFCNNF--IGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CEEEEE---EEEEECCTTTC-CCCCSSSEEEEE--TTEEEEECCTTCEECTTSSCEEC
T ss_pred ccceee---eecccCcccCCCCCCCCCCcccCc--CCCEEEecCCCcEECCCCCcccc
Confidence 566542 34678889974 35799999999 99999999999999999999975
No 332
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=95.62 E-value=1.9 Score=47.12 Aligned_cols=201 Identities=14% Similarity=0.070 Sum_probs=111.6
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEe-CCCCCccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQ-TGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~-~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
..+.+|+|.+.... +..+-..++.|...++..+. ....+.. ..-.....|++.|..++.++ + ...+
T Consensus 120 ~~V~~l~~~P~~~~--~lasGs~dg~i~lWd~~~~~--~~~~~~~~gH~~~V~~l~f~p~~~~~l~--s-------~s~D 186 (435)
T 4e54_B 120 RRATSLAWHPTHPS--TVAVGSKGGDIMLWNFGIKD--KPTFIKGIGAGGSITGLKFNPLNTNQFY--A-------SSME 186 (435)
T ss_dssp SCEEEEEECSSCTT--CEEEEETTSCEEEECSSCCS--CCEEECCCSSSCCCCEEEECSSCTTEEE--E-------ECSS
T ss_pred CCEEEEEEeCCCCC--EEEEEeCCCEEEEEECCCCC--ceeEEEccCCCCCEEEEEEeCCCCCEEE--E-------EeCC
Confidence 34678889876555 66676778888888776543 2222211 11234566777654333332 1 2346
Q ss_pred CCEEEEccCCCcccccccc--CcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCC
Q psy14257 328 GGIEKAGMHGENRSPLVTK--NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRP 405 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~--~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~ 405 (841)
+.|..+++.+.....+... ...+...+++++.+..|+. -...+.|...+++|.....+.. ....+ ..
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-g~~dg~i~~wd~~~~~~~~~~~-----h~~~v-----~~ 255 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT-GDNVGNVILLNMDGKELWNLRM-----HKKKV-----TH 255 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEE-ECSSSBEEEEESSSCBCCCSBC-----CSSCE-----EE
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEE-EeCCCcEeeeccCcceeEEEec-----ccceE-----Ee
Confidence 7888888887655554432 2234567888887665554 4567889888888764332210 00000 00
Q ss_pred CccccccceEEEEecCCCcEEEEccCCc-eEEEEec--CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC
Q psy14257 406 EDNLWIGKNLYWVESNLDQIEVAKLSGQ-FRRTLIA--GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS 476 (841)
Q Consensus 406 ~avdw~~~~LY~tD~~~~~I~v~~~~G~-~~~~l~~--~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld 476 (841)
+++...+..++.+-...+.|.+.++... ....+.. ........|+++|...+|+.+.. .+.|...++.
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~---D~~i~iwd~~ 326 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQ---KSEIRVYSAS 326 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEES---SSCEEEEESS
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcC---CCEEEEEECC
Confidence 1122233556767666778888776532 1111111 12234578899987666665543 3556555554
No 333
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.60 E-value=2.6 Score=43.81 Aligned_cols=204 Identities=9% Similarity=0.085 Sum_probs=108.7
Q ss_pred CceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeee-cCCCccccCCCCCCccccc-cceEEEEecCCCcEEEE
Q psy14257 351 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVL-GSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIEVA 428 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~-~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~v~ 428 (841)
...|++.+.+..++++-...++|...++.+...+.-.....+ +....+ .++.|. .+.+.++-...+.|.+.
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v-------~~~~~s~dg~~l~s~s~D~~v~~w 92 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIV-------QDCTLTADGAYALSASWDKTLRLW 92 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCE-------EEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccE-------EEEEECCCCCEEEEEeCCCEEEEE
Confidence 345666665555666666777777777654433211111111 000000 011111 14555666667889999
Q ss_pred ccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEecc----
Q psy14257 429 KLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQ---- 504 (841)
Q Consensus 429 ~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~---- 504 (841)
++........+.........++++|...+|+-... ...|..-++.+.....+. ..-.....+++.+.
T Consensus 93 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~---D~~i~vwd~~~~~~~~~~------~h~~~v~~~~~~~~~~~~ 163 (319)
T 3frx_A 93 DVATGETYQRFVGHKSDVMSVDIDKKASMIISGSR---DKTIKVWTIKGQCLATLL------GHNDWVSQVRVVPNEKAD 163 (319)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET---TSCEEEEETTSCEEEEEC------CCSSCEEEEEECCC----
T ss_pred ECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeEEEEe------ccCCcEEEEEEccCCCCC
Confidence 98654333333334456789999987555554443 356666667665433332 12233455666542
Q ss_pred -CCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 505 -LTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 505 -~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
.+.++++-...+.|...++........+..+ -.....+++. ++.++++-...+.|...+..+++..
T Consensus 164 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h--~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 164 DDSVTIISAGNDKMVKAWNLNQFQIEADFIGH--NSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp --CCEEEEEETTSCEEEEETTTTEEEEEECCC--CSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CCccEEEEEeCCCEEEEEECCcchhheeecCC--CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 2234445555678888888765444333332 2234567774 4556666556677777776555433
No 334
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=95.53 E-value=2.8 Score=43.62 Aligned_cols=287 Identities=10% Similarity=0.010 Sum_probs=145.7
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCccc--ceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLS--NIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDG 328 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~--~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~ 328 (841)
+.++.|...... +..+-...+.|...++.+.... .....+...-.....+++.+.+ -|++- ...++
T Consensus 20 V~~l~~~~~~~~--~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s--------~s~D~ 87 (319)
T 3frx_A 20 VTSLATSAGQPN--LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADG--AYALS--------ASWDK 87 (319)
T ss_dssp EEEEEECSSCTT--EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTS--SEEEE--------EETTS
T ss_pred EEEEEccCCCcc--EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCC--CEEEE--------EeCCC
Confidence 456666554334 6666666777766655432100 0111222222234445555433 22221 12356
Q ss_pred CEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcc
Q psy14257 329 GIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN 408 (841)
Q Consensus 329 ~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~av 408 (841)
.|..+++............-.....+++++.+..| ++-...+.|...++.+.....+.... .....+... |..-
T Consensus 88 ~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~i~vwd~~~~~~~~~~~h~----~~v~~~~~~-~~~~ 161 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMI-ISGSRDKTIKVWTIKGQCLATLLGHN----DWVSQVRVV-PNEK 161 (319)
T ss_dssp EEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEE-EEEETTSCEEEEETTSCEEEEECCCS----SCEEEEEEC-CC--
T ss_pred EEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEE-EEEeCCCeEEEEECCCCeEEEEeccC----CcEEEEEEc-cCCC
Confidence 78888765332222222233445678887765554 44456678888888775444332100 000000000 0000
Q ss_pred ccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 409 LWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 409 dw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
....+.++++-...+.|.+.++........+.........++++|...+|.-... .+.|..-++..........
T Consensus 162 ~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~---dg~i~iwd~~~~~~~~~~~--- 235 (319)
T 3frx_A 162 ADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGK---DGEIMLWNLAAKKAMYTLS--- 235 (319)
T ss_dssp ----CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEET---TCEEEEEETTTTEEEEEEE---
T ss_pred CCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCcEEEEec---
Confidence 0001345666667788999988765544434444456789999997655554443 4677777775443322222
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC------CCCcceEEEEe-cCeEEEEeCCCCeE
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD------SLTHPFAIALF-ENHVYWTDWRTNSV 561 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~------~l~~P~gla~~-~~~lY~td~~~~~i 561 (841)
.-.....+++.+.+..|..+.. +.|..++++............ .-.....+++. ++...++-...+.|
T Consensus 236 ---~~~~v~~~~~sp~~~~la~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i 310 (319)
T 3frx_A 236 ---AQDEVFSLAFSPNRYWLAAATA--TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVI 310 (319)
T ss_dssp ---CCSCEEEEEECSSSSEEEEEET--TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCE
T ss_pred ---CCCcEEEEEEcCCCCEEEEEcC--CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceE
Confidence 2235678999987777666553 457777777654332222110 01123466663 45555555555666
Q ss_pred EEEec
Q psy14257 562 IRANK 566 (841)
Q Consensus 562 ~~~~~ 566 (841)
...+.
T Consensus 311 ~vWd~ 315 (319)
T 3frx_A 311 RVWQV 315 (319)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55544
No 335
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=95.49 E-value=0.012 Score=64.92 Aligned_cols=93 Identities=20% Similarity=0.574 Sum_probs=57.4
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCccccc-ccc------------cCCCCCC--CcccCCCCcEEecCCCceecCC
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFCDE-KQC------------LRSDCHH--DCYNTPEGFMCVCPRDMYLQPD 165 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~e-C~~------------~~~~C~~--~C~~~~g~~~C~C~~Gy~l~~d 165 (841)
.|.++ +.|.+..+.| .|++|+.+..|.. |.. .++.|.+ .| .++++.|.|++||.
T Consensus 204 ~C~~~-G~C~~~~g~C----~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C--~~~~~~C~C~~G~~---- 272 (423)
T 2gy5_A 204 ACMNN-GVCHEDTGEC----ICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC--LPDPYGCSCATGWK---- 272 (423)
T ss_dssp CCCTT-CEECTTTCCE----ECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE--ETTTTEEECCBTCB----
T ss_pred CCCCC-CEEECCCCcE----eCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE--CCCCCeEEeCCCcc----
Confidence 58887 8998878888 8999998777732 321 0123322 23 36789999999997
Q ss_pred CCccccc-------cccCCCCCccC--ceeecCCCCceEEeecCCeeecCCCCceEe
Q psy14257 166 LITCSYL-------HPCEAWGTCSQ--DCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213 (841)
Q Consensus 166 ~~~C~~~-------~eC~~~~~Cs~--~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~ 213 (841)
|..|+.. ..|+..-.|.. .|.+. +.|.|.+||. +..|..
T Consensus 273 G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~-----~~C~C~~G~~----G~~Ce~ 320 (423)
T 2gy5_A 273 GLQCNEACHPGFYGPDCKLRCSCNNGEMCDRF-----QGCLCSPGWQ----GLQCER 320 (423)
T ss_dssp SGGGCBCCCTTBCSBTTCCBCCCTTCCEEETT-----TEEECCTTCB----STTSCB
T ss_pred cccccCccCCCCcCCcccccccCCCCCEecCC-----CceECCCCCc----CCCCcc
Confidence 5566541 12211112322 45543 2499999997 456654
No 336
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=95.46 E-value=0.007 Score=63.23 Aligned_cols=41 Identities=34% Similarity=0.843 Sum_probs=36.0
Q ss_pred cCCCCCC-CCCCccccccCCCCceeeeCCCCceeecCCCcccc
Q psy14257 592 KSPCEMN-NGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633 (841)
Q Consensus 592 ~n~C~~~-ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~ 633 (841)
.|.|..+ ||+|+|+|.... ++|+|.|+.||.|..|+++|..
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~-~~~~C~C~~G~~l~~d~~sC~p 43 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQ-ESYTCSCAQGYRLGEDHKQCVP 43 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCT-TSCCCBCCTTEEECTTSSCEEE
T ss_pred CCccCCCCCCCCCCEeeCCC-CCeEecCCCCcccCCCCCcccc
Confidence 5789998 999999999765 5699999999999999999983
No 337
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.43 E-value=3.1 Score=45.17 Aligned_cols=148 Identities=12% Similarity=0.043 Sum_probs=82.7
Q ss_pred ceEEEEecCCCcEEEEccC-Cce-EEEE------ecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc----
Q psy14257 413 KNLYWVESNLDQIEVAKLS-GQF-RRTL------IAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR---- 480 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~-G~~-~~~l------~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~---- 480 (841)
++++.+- ..+.|.+.++. +.. ..++ +.........++++|....++.+-.. .+.|...++.....
T Consensus 189 ~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~ 265 (447)
T 3dw8_B 189 YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS--KGTIRLCDMRASALCDRH 265 (447)
T ss_dssp SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET--TSCEEEEETTTCSSSCTT
T ss_pred CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC--CCeEEEEECcCCccccce
Confidence 4444454 57788888887 322 2222 22233457899999986244444333 46677777654332
Q ss_pred -EEEEEecccCCCC------------CCceeEEEeccCCEEEEEeCCCCeEEEEEcC--CCeeEEEEcCCCCCC------
Q psy14257 481 -SVIVRVDLLTSRG------------AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD--GKDHHVVLSNHDSLT------ 539 (841)
Q Consensus 481 -~~i~~~~~~~~~~------------~~P~glalD~~~~~LYw~d~~~~~I~~~~~d--G~~~~~i~~~~~~l~------ 539 (841)
..+.. .. .....+++.+.+..|..+.. +.|...++. +....++... ..+.
T Consensus 266 ~~~~~~------~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~~-~~~~~~l~~~ 336 (447)
T 3dw8_B 266 SKLFEE------PEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQVH-EYLRSKLCSL 336 (447)
T ss_dssp CEEECC------C-----CCHHHHHTTCEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEESC-GGGTTTHHHH
T ss_pred eeEecc------CCCccccccccccCceEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeecc-cccccccccc
Confidence 33321 11 15678999986666665544 889999886 3333333322 1111
Q ss_pred -------cceEEEEe-cCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 540 -------HPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 540 -------~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
..+.+++. ++...++-...+.|...+..+++..
T Consensus 337 ~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 337 YENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp HHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 02236663 3444466666778888887666544
No 338
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.41 E-value=4 Score=44.70 Aligned_cols=276 Identities=11% Similarity=-0.017 Sum_probs=137.6
Q ss_pred eEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccc
Q psy14257 265 VFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLV 344 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~ 344 (841)
+..+-...+.|...++..+. ....+...-.....+++.+ +. +++- ...++.|..+++.........
T Consensus 134 ~l~sgs~dg~i~vwd~~~~~---~~~~~~~h~~~V~~l~~~~--~~-~l~s--------~s~dg~i~vwd~~~~~~~~~~ 199 (464)
T 3v7d_B 134 YVITGADDKMIRVYDSINKK---FLLQLSGHDGGVWALKYAH--GG-ILVS--------GSTDRTVRVWDIKKGCCTHVF 199 (464)
T ss_dssp EEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECS--TT-EEEE--------EETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEcCCCcEEEEECCCCc---EEEEEeCCCcCEEEEEEcC--CC-EEEE--------EeCCCCEEEEECCCCcEEEEE
Confidence 44555566777777665442 1122222222344445432 22 3322 124568888887643332223
Q ss_pred ccCcCCCceEEEEc-cCCEEEEEeCCCCeEEEEEecCCccEEEEeee-----eecCCC----ccccC---CCCCCccccc
Q psy14257 345 TKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSERTVSFNLE-----VLGSDS----RVGIP---NCRPEDNLWI 411 (841)
Q Consensus 345 ~~~~~~P~glavD~-~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~-----~~~~~~----~~~i~---~~~~~avdw~ 411 (841)
...-.....+++.+ ..+.++++-...+.|...++............ ....+. .+... .....++.+.
T Consensus 200 ~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 279 (464)
T 3v7d_B 200 EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGH 279 (464)
T ss_dssp CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEE
T ss_pred CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCC
Confidence 33334455677775 34566666667788888887654432111000 000000 00000 0000112222
Q ss_pred cceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 412 GKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+++.++-...+.|.+.++........+.........++++|...+|+.... .+.|...++.......... .
T Consensus 280 -~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~-----~ 350 (464)
T 3v7d_B 280 -GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASM---DTTIRIWDLENGELMYTLQ-----G 350 (464)
T ss_dssp -TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEET---TSCEEEEETTTTEEEEEEC-----C
T ss_pred -CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeC---CCcEEEEECCCCcEEEEEe-----C
Confidence 344455556688999998655443334444466789999998777665553 4677777775332222222 2
Q ss_pred CCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEE-ecCeEEEEeCCCCeEEEEeccCCc
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIAL-FENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~-~~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
.-.....++++ ++.|+.+ ...+.|...++............ .....+++ .++.+.++-. .+.|...+..+|+
T Consensus 351 h~~~v~~~~~~--~~~l~s~-s~dg~v~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~ 423 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSA-AADGSIRGWDANDYSRKFSYHHT---NLSAITTFYVSDNILVSGS-ENQFNIYNLRSGK 423 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEE-ETTSEEEEEETTTCCEEEEEECT---TCCCEEEEEECSSEEEEEE-TTEEEEEETTTCC
T ss_pred CCCcEEEEEEc--CCEEEEE-eCCCcEEEEECCCCceeeeecCC---CCccEEEEEeCCCEEEEec-CCeEEEEECCCCc
Confidence 33345667775 4455544 44678999998765544333321 11223343 2334433333 5677777766554
No 339
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.29 E-value=3.7 Score=43.59 Aligned_cols=208 Identities=11% Similarity=0.060 Sum_probs=113.9
Q ss_pred CCCCceeEEEcCCC-CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEE
Q psy14257 442 DMESPRAIALDPRF-GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHT 520 (841)
Q Consensus 442 ~l~~P~giavd~~~-g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~ 520 (841)
.......|+++|.+ .+|+.... .+.|...+++.......... ...-.....+++.+.+++++++-...+.|..
T Consensus 72 h~~~v~~~~~~~~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 72 FDRRVTSLEWHPTHPTTVAVGSK---GGDIILWDYDVQNKTSFIQG---MGPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp CSSCEEEEEECSSCTTEEEEEEB---TSCEEEEETTSTTCEEEECC---CSTTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred CCCCEEEEEECCCCCCEEEEEcC---CCeEEEEeCCCcccceeeec---CCcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 34567889999986 45555543 46777778775555444331 0133456788898745555555556789999
Q ss_pred EEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCC
Q psy14257 521 VTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNN 599 (841)
Q Consensus 521 ~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~n 599 (841)
.++.+.....+......-.....+++. ++.++++-...+.|...+. .++....+....
T Consensus 146 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~-------------------- 204 (383)
T 3ei3_B 146 RDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK-------------------- 204 (383)
T ss_dssp EETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS--------------------
T ss_pred EECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC--------------------
Confidence 999987776665433212234667764 3444455455567776665 333332222110
Q ss_pred CCCccccccCCCCceeeeCCCCceeecCCCcccccCce-eEEe-ecCCeEEEEecCCCCccccceeecCCCCCceEEEEe
Q psy14257 600 GNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQ-FIIF-SRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFD 677 (841)
Q Consensus 600 g~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~-~l~~-~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d 677 (841)
+...+. ...+ ..+ +|+. +....|+..++..................+..++|+
T Consensus 205 ------------~~v~~~-----~~~~--------~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 259 (383)
T 3ei3_B 205 ------------AKVTHA-----EFNP--------RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFN 259 (383)
T ss_dssp ------------SCEEEE-----EECS--------SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEEC
T ss_pred ------------CcEEEE-----EECC--------CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEc
Confidence 000110 0011 111 2333 234456666665422111111112233567899999
Q ss_pred c-CCCEEEEEECCCCeEEEEEcccCc
Q psy14257 678 A-ANKKIYWTDQEYNEVKRSSIVGGQ 702 (841)
Q Consensus 678 ~-~~~~iyw~d~~~~~I~~~~~~g~~ 702 (841)
+ ..+.|+... ..+.|+..++....
T Consensus 260 ~~~~~~l~~~~-~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 260 PTDSTKLLTTD-QRNEIRVYSSYDWS 284 (383)
T ss_dssp TTTSCEEEEEE-SSSEEEEEETTBTT
T ss_pred CCCCCEEEEEc-CCCcEEEEECCCCc
Confidence 9 666666555 67899999887544
No 340
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.22 E-value=5.9 Score=45.52 Aligned_cols=285 Identities=9% Similarity=-0.013 Sum_probs=136.4
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCE
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGI 330 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I 330 (841)
+.+|+|.+..+. |.... .+.|...++..+. . ...+...-.....+++.|.+ -|+.- ...++.|
T Consensus 21 ~~~~~~spdg~~--l~~~~--~~~v~l~~~~~~~--~-~~~~~~h~~~v~~~~~spdg--~~las--------g~~d~~v 83 (611)
T 1nr0_A 21 AVVLGNTPAGDK--IQYCN--GTSVYTVPVGSLT--D-TEIYTEHSHQTTVAKTSPSG--YYCAS--------GDVHGNV 83 (611)
T ss_dssp CCCCEECTTSSE--EEEEE--TTEEEEEETTCSS--C-CEEECCCSSCEEEEEECTTS--SEEEE--------EETTSEE
T ss_pred eeEEeeCCCCCE--EEeCC--CCEEEEecCCCcc--c-CeEecCCCCceEEEEECCCC--cEEEE--------EeCCCCE
Confidence 456666654322 44332 3456555554332 1 22222222334556666544 22221 1235677
Q ss_pred EEEccC-CCcccc-ccccCcCCCceEEEEccCCEEEEEeCCC---CeEEEEEecCCccEEEEeeeeecCCCccccCCCCC
Q psy14257 331 EKAGMH-GENRSP-LVTKNIQWPSSLVIDYNQDILYWCDSHL---NTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRP 405 (841)
Q Consensus 331 ~~~~~d-G~~~~~-l~~~~~~~P~glavD~~~~~lYwaD~~~---~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~ 405 (841)
..+++. ++.... .....-..-..|++++++++|..+.... +.|+..+. |.....+. +... ..
T Consensus 84 ~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l~-----gh~~-------~v 150 (611)
T 1nr0_A 84 RIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNLT-----GQAR-------AM 150 (611)
T ss_dssp EEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCCC-----CCSS-------CE
T ss_pred EEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCcceec-----CCCC-------Cc
Confidence 777764 222111 1111223456899999888887776543 23444331 21111100 0000 00
Q ss_pred Ccccc--ccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEE
Q psy14257 406 EDNLW--IGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSV 482 (841)
Q Consensus 406 ~avdw--~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~ 482 (841)
.+++| .+..+..+-...+.|.+.+.........+.........++++|...+ +.+-.. .+.|..-++. |.....
T Consensus 151 ~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~-las~s~--D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 151 NSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL-FASTGG--DGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp EEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSE-EEEEET--TSCEEEEETTTCCEEEE
T ss_pred eEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCE-EEEEEC--CCcEEEEECCCCcEeee
Confidence 01222 12335666666778888886544333334444566789999997544 444433 3556555543 332222
Q ss_pred EEEeccc-CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCC-eeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCe
Q psy14257 483 IVRVDLL-TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGK-DHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNS 560 (841)
Q Consensus 483 i~~~~~~-~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~-~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~ 560 (841)
+...... ...-....++++.+.+..|. +-...+.|...++... ...++...........++.. .+..+++-...+.
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~-s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~ 305 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIA-SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIW-TKQALVSISANGF 305 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEE-EEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEE-CSSCEEEEETTCC
T ss_pred eccccccccccCCCEEEEEECCCCCEEE-EEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEE-cCCEEEEEeCCCc
Confidence 2110000 01223567899987665555 4445678888888744 33333322111122334444 4444445455566
Q ss_pred EEEEeccCCc
Q psy14257 561 VIRANKWNGS 570 (841)
Q Consensus 561 i~~~~~~~g~ 570 (841)
|...+..++.
T Consensus 306 i~~~~~~~~~ 315 (611)
T 1nr0_A 306 INFVNPELGS 315 (611)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeCCCCC
Confidence 6666655444
No 341
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.15 E-value=3.5 Score=42.57 Aligned_cols=289 Identities=11% Similarity=-0.019 Sum_probs=139.6
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccc--eEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSN--IDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSD 327 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~--~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~ 327 (841)
.+.+|+|.+..+. +..+-..++.|..-++..+.... ....+...-.....+++.+.+ -|++-. ..+
T Consensus 40 ~V~~v~~sp~~~~--~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg--~~l~s~--------~~d 107 (340)
T 4aow_A 40 WVTQIATTPQFPD--MILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDG--QFALSG--------SWD 107 (340)
T ss_dssp CEEEEEECTTCTT--EEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTS--SEEEEE--------ETT
T ss_pred CEEEEEEeCCCCC--EEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCC--CEEEEE--------ccc
Confidence 4668888775455 66776777888877765432111 111222222344556665543 222211 123
Q ss_pred CCEEEEccCCCccccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCc
Q psy14257 328 GGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPED 407 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~a 407 (841)
+.|...+...................+.+.+.+..|+.+ ...+.+...++.+.......... ....+. ..+
T Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~-s~d~~~~~~d~~~~~~~~~~~~~---~~~~v~-----~~~ 178 (340)
T 4aow_A 108 GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSG-SRDKTIKLWNTLGVCKYTVQDES---HSEWVS-----CVR 178 (340)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEE-ETTSCEEEECTTSCEEEEECSSS---CSSCEE-----EEE
T ss_pred ccceEEeecccceeeeecCCCCceeEEEEeecCccceee-cCCCeEEEEEeCCCceEEEEecc---ccCccc-----ceE
Confidence 455555555443333333333334444444444444333 33444555554443322211000 000000 001
Q ss_pred ccccc-ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 408 NLWIG-KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 408 vdw~~-~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
+.... ..++++-...+.|.+.++........+.........|+++|...+|+.... .+.|...++..........
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~---Dg~i~iwd~~~~~~~~~~~- 254 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGK---DGQAMLWDLNEGKHLYTLD- 254 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET---TCEEEEEETTTTEEEEEEE-
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeC---CCeEEEEEeccCceeeeec-
Confidence 11111 345566666678888888765544444444456789999997665554443 4677777765443332222
Q ss_pred cccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCC-------CCCCcceEEEEe-cCeEEEEeCCC
Q psy14257 487 DLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNH-------DSLTHPFAIALF-ENHVYWTDWRT 558 (841)
Q Consensus 487 ~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~-------~~l~~P~gla~~-~~~lY~td~~~ 558 (841)
.-.....+++.+. +.+..+ ...+.|...++++.......... .....-..|++. ++.++++-...
T Consensus 255 -----~~~~v~~~~~~~~-~~~~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 255 -----GGDIINALCFSPN-RYWLCA-ATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp -----CSSCEEEEEECSS-SSEEEE-EETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred -----CCceEEeeecCCC-Cceeec-cCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 2234566777643 333333 23577888888775443322211 001122456663 34555555556
Q ss_pred CeEEEEeccCCc
Q psy14257 559 NSVIRANKWNGS 570 (841)
Q Consensus 559 ~~i~~~~~~~g~ 570 (841)
+.|+..+..+|+
T Consensus 328 g~v~iW~~~tGt 339 (340)
T 4aow_A 328 NLVRVWQVTIGT 339 (340)
T ss_dssp SCEEEEEEEC--
T ss_pred CEEEEEeCCCcC
Confidence 777766666664
No 342
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.12 E-value=3.5 Score=48.92 Aligned_cols=218 Identities=8% Similarity=0.042 Sum_probs=120.4
Q ss_pred CCEEEEcc---CCC--ccccccccC-------cCCCceEEEE-ccCCEEEEEeCCC----CeEEEEEecCC-ccEEEEee
Q psy14257 328 GGIEKAGM---HGE--NRSPLVTKN-------IQWPSSLVID-YNQDILYWCDSHL----NTVESVRVDGS-ERTVSFNL 389 (841)
Q Consensus 328 ~~I~~~~~---dG~--~~~~l~~~~-------~~~P~glavD-~~~~~lYwaD~~~----~~I~~~~ldG~-~~~~~~~~ 389 (841)
..+.|... +|. ..+++...+ ...-.+.++. +++++|.|+.... .+|+.++++++ .... ..+
T Consensus 141 ~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~ 219 (751)
T 2xe4_A 141 KIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV 219 (751)
T ss_dssp CEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE
T ss_pred eEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc
Confidence 35777766 554 444444321 1134567888 8888777765433 25999999887 4210 000
Q ss_pred eeecCCCccccCCCCCCcccc--ccceEEEEecC----CCcEEEEccCCce--EEEEec-CCCCCceeEEEcCCCCeEEE
Q psy14257 390 EVLGSDSRVGIPNCRPEDNLW--IGKNLYWVESN----LDQIEVAKLSGQF--RRTLIA-GDMESPRAIALDPRFGLLFW 460 (841)
Q Consensus 390 ~~~~~~~~~~i~~~~~~avdw--~~~~LY~tD~~----~~~I~v~~~~G~~--~~~l~~-~~l~~P~giavd~~~g~Ly~ 460 (841)
.... ..+.| .++.||++... ..+|++.++.+.. .+.+.. ..-..-.++++.|++.+|++
T Consensus 220 ~~~~------------~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~ 287 (751)
T 2xe4_A 220 SGTN------------GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCI 287 (751)
T ss_dssp EEEC------------SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEE
T ss_pred cCce------------eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEE
Confidence 0000 12334 23567776532 1478888887643 222322 11122356789999889999
Q ss_pred EecCCCCCeEEEecCCCCC--c--EEEEEecccCCCCCCceeEEEe-ccCCEEEEEeC----CCCeEEEEEcCC-CeeEE
Q psy14257 461 TDWDSKAPRIERCSMSGEH--R--SVIVRVDLLTSRGAWPNGLTLD-YQLTRIYWIDA----KSDSIHTVTYDG-KDHHV 530 (841)
Q Consensus 461 td~~~~~~~I~r~~ldG~~--~--~~i~~~~~~~~~~~~P~glalD-~~~~~LYw~d~----~~~~I~~~~~dG-~~~~~ 530 (841)
+.+......|+.+++++.. . +.+.. ....+ -..+| ..+++||+... .+.+|+++++++ ...+.
T Consensus 288 ~~~~~~~~~l~~~d~~~~~~~~~~~~l~~------~~~~~-~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 288 GSQSPETAEVHLLDLRKGNAHNTLEIVRP------REKGV-RYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp EEECSSCEEEEEEESSSCTTCCCEEESSC------CCTTC-CEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCC
T ss_pred EecCCCCceEEEEECCCCCCCceeEEeec------CCCCc-eEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCccccee
Confidence 8765446789999997642 2 23322 11112 12344 34788887643 345899999884 33333
Q ss_pred -EEcCCCCCCcceEEEEecCeEEEEeCCCC--eEEEEec
Q psy14257 531 -VLSNHDSLTHPFAIALFENHVYWTDWRTN--SVIRANK 566 (841)
Q Consensus 531 -i~~~~~~l~~P~gla~~~~~lY~td~~~~--~i~~~~~ 566 (841)
++..... ....++++++++||++-...+ .|..++.
T Consensus 361 ~li~~~~~-~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 361 VLVDHSED-VFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEECCCSS-EEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred eEECCCCC-cEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 4332211 123456777888888765433 4555553
No 343
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.09 E-value=3.6 Score=42.29 Aligned_cols=273 Identities=10% Similarity=-0.003 Sum_probs=142.8
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTV 521 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~ 521 (841)
.......++++|...+|+.... .+.|...++.......... ..-.....+++.+.+..|+.+. ..+.|...
T Consensus 22 h~~~v~~~~~s~~~~~l~s~~~---dg~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~~-~d~~i~vw 92 (312)
T 4ery_A 22 HTKAVSSVKFSPNGEWLASSSA---DKLIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSAS-DDKTLKIW 92 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEET---TSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEE-TTSEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEeeC---CCeEEEEeCCCcccchhhc-----cCCCceEEEEEcCCCCEEEEEC-CCCEEEEE
Confidence 3455688999997666655543 3456555554333222222 2334467899987666665544 46788888
Q ss_pred EcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCC
Q psy14257 522 TYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNG 600 (841)
Q Consensus 522 ~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng 600 (841)
++........+..+ -.....+++. ++.++++-...+.|...+..+++....+.... .
T Consensus 93 d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--------------------~ 150 (312)
T 4ery_A 93 DVSSGKCLKTLKGH--SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS--------------------D 150 (312)
T ss_dssp ETTTCCEEEEEECC--SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS--------------------S
T ss_pred ECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC--------------------C
Confidence 88754433333322 1233556663 34455555556677777765554333222100 0
Q ss_pred CCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEecCCCCccccceeecCCCCCceEEEEecC
Q psy14257 601 NCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAA 679 (841)
Q Consensus 601 ~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~ 679 (841)
.... ....|++ .+|+.+ ....|+..++..... ...+.......+..++|+|.
T Consensus 151 ~v~~----------~~~~~~~---------------~~l~~~~~d~~i~~wd~~~~~~--~~~~~~~~~~~~~~~~~~~~ 203 (312)
T 4ery_A 151 PVSA----------VHFNRDG---------------SLIVSSSYDGLCRIWDTASGQC--LKTLIDDDNPPVSFVKFSPN 203 (312)
T ss_dssp CEEE----------EEECTTS---------------SEEEEEETTSCEEEEETTTCCE--EEEECCSSCCCEEEEEECTT
T ss_pred cEEE----------EEEcCCC---------------CEEEEEeCCCcEEEEECCCCce--eeEEeccCCCceEEEEECCC
Confidence 0000 0111111 122222 334455555543221 11111122234567899998
Q ss_pred CCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcce--eEEeecCCcEEEEec
Q psy14257 680 NKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSG--LAIDWIAQNMFIAVS 757 (841)
Q Consensus 680 ~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~g--lAvD~~~~~LYw~~~ 757 (841)
.+.|+... ..+.|+..++.... .............. .++....+.++.+
T Consensus 204 ~~~l~~~~-~d~~i~iwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-- 254 (312)
T 4ery_A 204 GKYILAAT-LDNTLKLWDYSKGK--------------------------CLKTYTGHKNEKYCIFANFSVTGGKWIVS-- 254 (312)
T ss_dssp SSEEEEEE-TTTEEEEEETTTTE--------------------------EEEEECSSCCSSSCCCEEEECSSSCEEEE--
T ss_pred CCEEEEEc-CCCeEEEEECCCCc--------------------------EEEEEEecCCceEEEEEEEEeCCCcEEEE--
Confidence 88887766 57888888876544 11112111112222 2333344566666
Q ss_pred CCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEe
Q psy14257 758 SPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSN 807 (841)
Q Consensus 758 ~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d 807 (841)
....+.|.+.++........+.+. -.....++.+|....|.-+-
T Consensus 255 g~~dg~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~p~~~~l~s~~ 298 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIVQKLQGH------TDVVISTACHPTENIIASAA 298 (312)
T ss_dssp CCTTSCEEEEETTTCCEEEEECCC------SSCEEEEEECSSSSEEEEEE
T ss_pred ECCCCEEEEEECCCchhhhhhhcc------CCcEEEEeecCcCCceEEEE
Confidence 456788999999765443333320 35678899999866666554
No 344
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.03 E-value=4.3 Score=42.93 Aligned_cols=150 Identities=9% Similarity=0.066 Sum_probs=83.4
Q ss_pred EEEecCCCcEEEEccCC-ceEEEEecCCCCCceeEEEcCC-CCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCC
Q psy14257 416 YWVESNLDQIEVAKLSG-QFRRTLIAGDMESPRAIALDPR-FGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRG 493 (841)
Q Consensus 416 Y~tD~~~~~I~v~~~~G-~~~~~l~~~~l~~P~giavd~~-~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~ 493 (841)
.++-...+.|.+.++.. +...++ .........+++.|. .|.++++-.. .+.|...++.......... ..-
T Consensus 169 l~t~s~D~~v~lwd~~~~~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~--Dg~v~~wd~~~~~~~~~~~-----~h~ 240 (354)
T 2pbi_B 169 ILTASGDGTCALWDVESGQLLQSF-HGHGADVLCLDLAPSETGNTFVSGGC--DKKAMVWDMRSGQCVQAFE-----THE 240 (354)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECCCSSCCEEEEEET--TSCEEEEETTTCCEEEEEC-----CCS
T ss_pred EEEEeCCCcEEEEeCCCCeEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeC--CCeEEEEECCCCcEEEEec-----CCC
Confidence 33444556777777653 333333 233345567788775 3445555433 4677777775433222222 233
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
...+.+++.+.+..|+ +-...+.|...++.......+............+++. ++.+..+-...+.|...+..+++..
T Consensus 241 ~~v~~v~~~p~~~~l~-s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 319 (354)
T 2pbi_B 241 SDVNSVRYYPSGDAFA-SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRV 319 (354)
T ss_dssp SCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEE
T ss_pred CCeEEEEEeCCCCEEE-EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceE
Confidence 4567899987655554 4445678999998765444444332212233456663 4555556556677777776666544
Q ss_pred EE
Q psy14257 573 TL 574 (841)
Q Consensus 573 ~~ 574 (841)
..
T Consensus 320 ~~ 321 (354)
T 2pbi_B 320 SI 321 (354)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 345
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=94.95 E-value=0.4 Score=52.78 Aligned_cols=206 Identities=8% Similarity=-0.035 Sum_probs=117.6
Q ss_pred CceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc--ccceEEEEecCCCcEEEE
Q psy14257 351 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW--IGKNLYWVESNLDQIEVA 428 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw--~~~~LY~tD~~~~~I~v~ 428 (841)
-..|++.+..+.+..+-...+.|...+++......+.... +.... ..++.| .+++++++-+..+.|.+.
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~--gH~~~-------V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI--GAGGS-------ITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC--SSSCC-------CCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc--CCCCC-------EEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 3567777766666666667778888887755544332211 01000 123444 346677777778899999
Q ss_pred ccCCceEEEEecCCC--CCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCC
Q psy14257 429 KLSGQFRRTLIAGDM--ESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLT 506 (841)
Q Consensus 429 ~~~G~~~~~l~~~~l--~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~ 506 (841)
++.+...+++..... .....+++++...+|+.... .+.|...+++|.....+. ..-.....+++.+.+.
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~---dg~i~~wd~~~~~~~~~~------~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDN---VGNVILLNMDGKELWNLR------MHKKKVTHVALNPCCD 263 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECS---SSBEEEEESSSCBCCCSB------CCSSCEEEEEECTTCS
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeC---CCcEeeeccCcceeEEEe------cccceEEeeeecCCCc
Confidence 999887766654332 23467899987666554442 467888888775433221 1233457888987777
Q ss_pred EEEEEeCCCCeEEEEEcCCCe-eEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcceEE
Q psy14257 507 RIYWIDAKSDSIHTVTYDGKD-HHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSDVTL 574 (841)
Q Consensus 507 ~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~~~~ 574 (841)
.++.+-...+.|...++.... ...+......-.....|++. ++...++-...+.|...+..++.....
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 777666556777777765422 11111111001112344442 344455555567777777666554443
No 346
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=94.95 E-value=3.9 Score=41.99 Aligned_cols=273 Identities=12% Similarity=0.015 Sum_probs=142.4
Q ss_pred ceEEEEecCCCcEEEEccC-CceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 413 KNLYWVESNLDQIEVAKLS-GQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+++..+-...+.|.+.++. ++.... +.........|+++|...+|+.... .+.|...++........+. .
T Consensus 35 ~~~l~s~~~dg~i~iw~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~-----~ 105 (312)
T 4ery_A 35 GEWLASSSADKLIKIWGAYDGKFEKT-ISGHKLGISDVAWSSDSNLLVSASD---DKTLKIWDVSSGKCLKTLK-----G 105 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEE-ECCCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTCCEEEEEE-----C
T ss_pred CCEEEEeeCCCeEEEEeCCCcccchh-hccCCCceEEEEEcCCCCEEEEECC---CCEEEEEECCCCcEEEEEc-----C
Confidence 3444444556777777764 444443 3344456789999998666665553 4677777775433333333 2
Q ss_pred CCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCc
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
.-.....+++.+.+..|+... ..+.|...++........+..+ -.....+++. ++.++++-...+.|...+..+++
T Consensus 106 ~~~~v~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 106 HSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVKTGKCLKTLPAH--SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp CSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCEEEEEecCC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 334457788887666665444 4678888888754433333222 1223566663 34555555556677777765554
Q ss_pred ceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEE
Q psy14257 571 DVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRG 649 (841)
Q Consensus 571 ~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~ 649 (841)
....+..... .... ..+.-|+ ..+|+.+ ..+.|+.
T Consensus 183 ~~~~~~~~~~-------------------~~~~----------~~~~~~~---------------~~~l~~~~~d~~i~i 218 (312)
T 4ery_A 183 CLKTLIDDDN-------------------PPVS----------FVKFSPN---------------GKYILAATLDNTLKL 218 (312)
T ss_dssp EEEEECCSSC-------------------CCEE----------EEEECTT---------------SSEEEEEETTTEEEE
T ss_pred eeeEEeccCC-------------------CceE----------EEEECCC---------------CCEEEEEcCCCeEEE
Confidence 3332211100 0000 0011111 1223332 2344555
Q ss_pred EecCCCCccccceeec-CCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCce
Q psy14257 650 VDLEHPYYHTIPTISI-PQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQ 728 (841)
Q Consensus 650 ~~l~~~~~~~~~~~~~-~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (841)
.++..... ...+.. ..........+.+..+.++.+-...+.|+..++....
T Consensus 219 wd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~-------------------------- 270 (312)
T 4ery_A 219 WDYSKGKC--LKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE-------------------------- 270 (312)
T ss_dssp EETTTTEE--EEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--------------------------
T ss_pred EECCCCcE--EEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--------------------------
Confidence 55543211 001100 0011122334555556666666677888888887654
Q ss_pred EEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecC
Q psy14257 729 IQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLE 770 (841)
Q Consensus 729 ~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~ 770 (841)
....+......+..+|+.+.++.|.-+. ....++|.+.+.+
T Consensus 271 ~~~~~~~h~~~v~~~~~~p~~~~l~s~~-~~~d~~i~~W~~d 311 (312)
T 4ery_A 271 IVQKLQGHTDVVISTACHPTENIIASAA-LENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEE-CTTTCCEEEEECC
T ss_pred hhhhhhccCCcEEEEeecCcCCceEEEE-ccCCccEEEecCC
Confidence 2223344556678899998877666552 1245778887764
No 347
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=94.76 E-value=3.9 Score=42.00 Aligned_cols=184 Identities=10% Similarity=-0.020 Sum_probs=88.0
Q ss_pred CCCEEEEccCCCccc-ccc---ccCcCCCceEEEEcc-CCEEEEEeCCCCeEEEEEecCCcc-------EEEEeeeeecC
Q psy14257 327 DGGIEKAGMHGENRS-PLV---TKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSER-------TVSFNLEVLGS 394 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~-~l~---~~~~~~P~glavD~~-~~~lYwaD~~~~~I~~~~ldG~~~-------~~~~~~~~~~~ 394 (841)
++.|..++++..... .+. ...-.....|++.+. .+.++++-...+.|...+++.... +.+..... .
T Consensus 32 dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~--~ 109 (351)
T 3f3f_A 32 DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLND--S 109 (351)
T ss_dssp TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECC--C
T ss_pred CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecc--c
Confidence 345666665532111 111 123344567888774 244444555567888888876431 11211110 0
Q ss_pred CCccccCCCCCCcccccc---ceEEEEecCCCcEEEEccCCce-EE------EEe------cCCCCCceeEEEcCC---C
Q psy14257 395 DSRVGIPNCRPEDNLWIG---KNLYWVESNLDQIEVAKLSGQF-RR------TLI------AGDMESPRAIALDPR---F 455 (841)
Q Consensus 395 ~~~~~i~~~~~~avdw~~---~~LY~tD~~~~~I~v~~~~G~~-~~------~l~------~~~l~~P~giavd~~---~ 455 (841)
... ..++.|.. +.+.++-...+.|.+.++.... .. .+. .........+++.|. .
T Consensus 110 ~~~-------v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 182 (351)
T 3f3f_A 110 KGS-------LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSP 182 (351)
T ss_dssp SSC-------EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSC
T ss_pred CCc-------eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCC
Confidence 000 01233322 3444554556788888865321 10 000 022345678888886 4
Q ss_pred CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCC---EEEEEeCCCCeEEEEEcCC
Q psy14257 456 GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLT---RIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 456 g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~---~LYw~d~~~~~I~~~~~dG 525 (841)
.+|..+... ..+............+... ...-.....+++.+.+. +++.+-...+.|...++..
T Consensus 183 ~~l~~~~~~---~~~~~~~~~~~~~~~~~~~---~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~ 249 (351)
T 3f3f_A 183 EKLAVSALE---QAIIYQRGKDGKLHVAAKL---PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITE 249 (351)
T ss_dssp CEEEEEETT---EEEEEEECTTSCEEEEEEC---CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEE
T ss_pred cEEEEecCC---CcEEEEccCCCceeeeeec---CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCC
Confidence 555554432 3343333222222222221 02233567888887652 5555555567787777754
No 348
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=94.74 E-value=0.013 Score=49.53 Aligned_cols=51 Identities=22% Similarity=0.587 Sum_probs=37.4
Q ss_pred CCCCCCCCCCCCCCCCCccc-----ccccccCCCCCC--CcccCC--CCcEEecCCCceecCCCCccc-cccc
Q psy14257 112 KALVCDGEPACFNGEDEMFC-----DEKQCLRSDCHH--DCYNTP--EGFMCVCPRDMYLQPDLITCS-YLHP 174 (841)
Q Consensus 112 ~~~~Cdg~~~C~~g~de~~C-----~eC~~~~~~C~~--~C~~~~--g~~~C~C~~Gy~l~~d~~~C~-~~~e 174 (841)
.++.| .|+.|+. .| ++|.. .+|.+ .|+++. ++|+|.|++||. |+.|+ +++|
T Consensus 30 ~~y~C----~C~~G~~--~C~~~~~~~C~~--~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~~ide 90 (91)
T 1tpg_A 30 RVEYC----WCNSGRA--QCHSVPVKSCSE--PRCFNGGTCQQALYFSDFVCQCPEGFA----GKSCEIDTRA 90 (91)
T ss_dssp CEEEE----ECSSSCC--BCCEECEEECSS--CCSCTTCEEEEESSSSCEEEECCTTCB----SSSCCBCSSC
T ss_pred CCcEe----ECCCCCc--ccccCcCCcccC--CCCCCCCEeecCCCCCCeEeECCCCCc----CCcCCcCCCC
Confidence 35667 7888886 55 45653 46864 799987 999999999996 67786 4543
No 349
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.71 E-value=0.51 Score=50.35 Aligned_cols=145 Identities=12% Similarity=-0.109 Sum_probs=59.4
Q ss_pred CCeEEec-cCccccccccccccEEEE--ecc-ccceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCC
Q psy14257 220 SPFVIFS-NRHELRGVDLRTFNVIAL--ISS-LKNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTG 295 (841)
Q Consensus 220 ~p~ll~s-~~~~I~~~~~~~~~~~~l--~~~-~~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 295 (841)
..+++.. ....|+..++.......+ +.+ ...+.++.|.... . +..+-..++.|...++..+........+...
T Consensus 23 g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~--~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~ 99 (377)
T 3dwl_C 23 RTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKS-N--RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL 99 (377)
T ss_dssp SSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTT-C--CEEEEETTSSEEEC------CCCCEEECCCC
T ss_pred CCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCC-C--EEEEEeCCCeEEEEEcCCCCceeeeeEeccc
Confidence 3344444 344555555554422222 222 2346778887653 3 4445456677877776544200111222222
Q ss_pred CCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCc----cccccccCcCCCceEEEEccCCEEEEEeCCCC
Q psy14257 296 LSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGEN----RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 371 (841)
Q Consensus 296 l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~----~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~ 371 (841)
-.....+++.+.++.++ .. ..++.|..++++... ...+....-.....|++.+.++.|+... ..+
T Consensus 100 ~~~v~~~~~~~~~~~l~--~~--------~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~d~ 168 (377)
T 3dwl_C 100 NRAATFVRWSPNEDKFA--VG--------SGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC-ADR 168 (377)
T ss_dssp SSCEEEEECCTTSSCCE--EE--------ESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE-SSS
T ss_pred CCceEEEEECCCCCEEE--EE--------ecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe-CCC
Confidence 23344555554332222 11 134567777766443 1222111233455666666544444333 223
Q ss_pred eEEEEEe
Q psy14257 372 TVESVRV 378 (841)
Q Consensus 372 ~I~~~~l 378 (841)
.|...++
T Consensus 169 ~i~iwd~ 175 (377)
T 3dwl_C 169 KAYVLSA 175 (377)
T ss_dssp CEEEEEE
T ss_pred EEEEEEE
Confidence 4444443
No 350
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=94.70 E-value=0.043 Score=63.99 Aligned_cols=83 Identities=23% Similarity=0.481 Sum_probs=56.8
Q ss_pred cccCCCCCeEecCCCCCCCCCCCC----CCCCCccc----ccccccC-CCCCC--CcccCCCCcEEecCCCceecCCCCc
Q psy14257 100 FDCQDVLRTCIPKALVCDGEPACF----NGEDEMFC----DEKQCLR-SDCHH--DCYNTPEGFMCVCPRDMYLQPDLIT 168 (841)
Q Consensus 100 ~~C~~~~~~Ci~~~~~Cdg~~~C~----~g~de~~C----~eC~~~~-~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~ 168 (841)
..|.+. +.|+. ..| .|. .||.+..| ++|.... ..|++ .|.+ +.|.|++||. |..
T Consensus 493 ~~Cs~~-G~C~~--g~C----~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~----G~~ 557 (690)
T 3fcs_B 493 PVCSQR-GECLC--GQC----VCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWT----GYY 557 (690)
T ss_dssp CGGGGS-EEECS--SSE----EECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEE----SSS
T ss_pred CCCCCC-CEEEC--Cee----EeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCc----CCC
Confidence 458877 89984 566 888 88888777 4565321 35643 6765 8999999997 566
Q ss_pred cc---cccccCCC--CCccC--ceeecCCCCceEEee-cCCee
Q psy14257 169 CS---YLHPCEAW--GTCSQ--DCEPSVSNNSYKCTC-HAGYE 203 (841)
Q Consensus 169 C~---~~~eC~~~--~~Cs~--~C~~~~~~g~~~C~C-~~G~~ 203 (841)
|+ +.++|... ..|+. .|.+ .+|.| .+||.
T Consensus 558 CeC~~~~~~C~~~~g~~C~~~G~C~~------g~C~C~~~Gy~ 594 (690)
T 3fcs_B 558 CNCTTRTDTCMSSNGLLCSGRGKCEC------GSCVCIQPGSY 594 (690)
T ss_dssp SCEECCCTTTBCTTSSBTSSSCEEET------TEEECCSTTCB
T ss_pred CccCCCCCcccCCCCCCCCCCCEEeC------CEEECCCCCcc
Confidence 76 46677531 45654 4532 28999 89997
No 351
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=94.68 E-value=0.023 Score=45.37 Aligned_cols=36 Identities=17% Similarity=0.268 Sum_probs=24.8
Q ss_pred cccccCC-CCCcc--CceeecCCCCceEEeec-CCeeecCCC
Q psy14257 171 YLHPCEA-WGTCS--QDCEPSVSNNSYKCTCH-AGYELEPDM 208 (841)
Q Consensus 171 ~~~eC~~-~~~Cs--~~C~~~~~~g~~~C~C~-~G~~l~~d~ 208 (841)
+++||.. ...|. +.|.|+ .|+|+|.|. .||....++
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt--~Gsy~C~~~~~g~~~~~~~ 41 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINH--YGGYLCLPRSAAVINDLHG 41 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEET--TCCEEEEETTSCCCSCCSC
T ss_pred ccccccCCCCCCCCCCEeECC--CCCeEecccCCcccccccC
Confidence 6789963 46784 489999 999999932 355444333
No 352
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=94.66 E-value=0.0096 Score=56.90 Aligned_cols=52 Identities=25% Similarity=0.682 Sum_probs=40.0
Q ss_pred cCCCCCeEecCCCCCCCCCCCCCCCCCccc----ccccccCCCCCC--CcccC-CCCcEEecCCCce
Q psy14257 102 CQDVLRTCIPKALVCDGEPACFNGEDEMFC----DEKQCLRSDCHH--DCYNT-PEGFMCVCPRDMY 161 (841)
Q Consensus 102 C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C----~eC~~~~~~C~~--~C~~~-~g~~~C~C~~Gy~ 161 (841)
|.+ +.|+ .++.| .|.+||.+..| ++|.. ..+|++ .|.++ +++|+|.|++||.
T Consensus 105 C~~--g~C~-~~~~C----~C~~G~~G~~C~~~~~~C~~-~~~C~~~g~C~~~~~~~~~C~C~~G~~ 163 (169)
T 2vj2_A 105 CVH--GICN-EPWQC----LCETNWGGQLCDKDLNYCGT-HQPCLNGGTCSNTGPDKYQCSCPEGYS 163 (169)
T ss_dssp CSS--EECS-STTCC----EECTTEETTTTCEESCHHHH-TCCCCTTCEEEECSTTCEEEECCTTCC
T ss_pred CCC--CCcC-CCCEE----eCCCCCCCCcccCCCCCCCC-CCCCCCCCEEcCCCCCCcEeECCCCCc
Confidence 655 6776 46778 89999987777 46753 347864 79996 8999999999996
No 353
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=94.63 E-value=9 Score=44.69 Aligned_cols=149 Identities=9% Similarity=-0.015 Sum_probs=78.5
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecC---CCCCceeEEEcCCCC-eEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAG---DMESPRAIALDPRFG-LLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~---~l~~P~giavd~~~g-~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
+++.++-+..+.|.+.++.+.....+... .......++++|... .++.+-.. .+.|...++..........
T Consensus 484 ~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~--- 558 (694)
T 3dm0_A 484 NRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW--DKTVKVWNLSNCKLRSTLA--- 558 (694)
T ss_dssp SSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTCCEEEEEC---
T ss_pred CCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC--CCeEEEEECCCCcEEEEEc---
Confidence 33444555567787777776655444332 123357888888642 23444333 4566666765443333322
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccC
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWN 568 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~ 568 (841)
..-.....+++.+.+.. +.+-...+.|...++........+.. -.....+++..+..+.+-...+.|...+..+
T Consensus 559 --~h~~~v~~v~~spdg~~-l~sg~~Dg~i~iwd~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 559 --GHTGYVSTVAVSPDGSL-CASGGKDGVVLLWDLAEGKKLYSLEA---NSVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp --CCSSCEEEEEECTTSSE-EEEEETTSBCEEEETTTTEEEECCBC---SSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred --CCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCceEEEecC---CCcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 23345678999875544 44555567888888865433222211 1223556664433222222344566666554
Q ss_pred Ccce
Q psy14257 569 GSDV 572 (841)
Q Consensus 569 g~~~ 572 (841)
+..+
T Consensus 633 ~~~~ 636 (694)
T 3dm0_A 633 KSIV 636 (694)
T ss_dssp TEEE
T ss_pred CCCh
Confidence 4433
No 354
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.44 E-value=1.1 Score=53.39 Aligned_cols=251 Identities=9% Similarity=-0.042 Sum_probs=125.4
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
.+.++.|.... . ++.+-..++.|...++.++.. .....+...-.....+++.+..+.-+++- ...++.
T Consensus 11 ~V~~l~~s~dg-~--~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~s~~~~~~~l~s--------~s~Dg~ 78 (753)
T 3jro_A 11 LIHDAVLDYYG-K--RLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDWAHPKFGTILAS--------CSYDGK 78 (753)
T ss_dssp CEEEECCCSSS-C--CEEEEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEECCTTSCSEEEE--------EETTSC
T ss_pred eeEEEEECCCC-C--eEEEEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEecCCCCCCEEEE--------EeCCCe
Confidence 35567776653 2 444445677888777764431 11122222222344455543311122221 124567
Q ss_pred EEEEccCCCccccc--cccCcCCCceEEEEcc--CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCC
Q psy14257 330 IEKAGMHGENRSPL--VTKNIQWPSSLVIDYN--QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRP 405 (841)
Q Consensus 330 I~~~~~dG~~~~~l--~~~~~~~P~glavD~~--~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~ 405 (841)
|..+++++.....+ ....-.....+++.+. ++.|+ +-...+.|...++............. ....+
T Consensus 79 I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~-sgs~dg~I~vwdl~~~~~~~~~~~~~--~~~~v------- 148 (753)
T 3jro_A 79 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLL-VASSDGKVSVVEFKENGTTSPIIIDA--HAIGV------- 148 (753)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEE-EEETTSEEEEEECCSSSCCCCEEEEC--CSSCE-------
T ss_pred EEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEE-EEeCCCcEEEEEeecCCCcceeEeec--CCCce-------
Confidence 88888765432222 2223445667888877 44444 44567788888886652221111100 00000
Q ss_pred Cccccc--------------cceEEEEecCCCcEEEEccCCc----eEEEEecCCCCCceeEEEcCCC--CeEEEEecCC
Q psy14257 406 EDNLWI--------------GKNLYWVESNLDQIEVAKLSGQ----FRRTLIAGDMESPRAIALDPRF--GLLFWTDWDS 465 (841)
Q Consensus 406 ~avdw~--------------~~~LY~tD~~~~~I~v~~~~G~----~~~~l~~~~l~~P~giavd~~~--g~Ly~td~~~ 465 (841)
..+.|. .+.+.++-...+.|.+.++... .....+.........|+++|.. +.++.+-..
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~- 227 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQ- 227 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEES-
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEec-
Confidence 011111 2566666667788998887643 1222223334567899999983 444444433
Q ss_pred CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 466 KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 466 ~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
.+.|...++.................-.....+++.+.+..|+.+ ...+.|...+++.
T Consensus 228 -Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 228 -DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKENL 285 (753)
T ss_dssp -SSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CSSSCEECCBCCS
T ss_pred -CCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE-cCCCEEEEEecCC
Confidence 355655555432211100000000123346788998765555544 4467788887763
No 355
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=94.32 E-value=0.0086 Score=46.19 Aligned_cols=39 Identities=18% Similarity=0.497 Sum_probs=28.2
Q ss_pred ccccccCCCCCC----CcccCCCCcEEecCCCceecCCCCcccccccc
Q psy14257 132 DEKQCLRSDCHH----DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 132 ~eC~~~~~~C~~----~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
++|.. .+|.+ .|.++.++|+|.|++||.+ |..|+..++|
T Consensus 12 d~C~s--nPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~~C 54 (61)
T 2k2s_B 12 AACSS--NPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNVTC 54 (61)
T ss_dssp CHHHH--CSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCEEE
T ss_pred CcCcC--CCCcCCCccccccCCCceEeECCCCCcc---CCCCCCCCEe
Confidence 45553 35753 6999999999999999972 3457666566
No 356
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=94.18 E-value=0.043 Score=60.49 Aligned_cols=61 Identities=21% Similarity=0.520 Sum_probs=40.7
Q ss_pred cccCCCCCeEecCCCCCCCCCCCCCCCCCccccc-ccccC--------CCCCC--CcccCCCCcEEecCCCceecCCCCc
Q psy14257 100 FDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDE-KQCLR--------SDCHH--DCYNTPEGFMCVCPRDMYLQPDLIT 168 (841)
Q Consensus 100 ~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~e-C~~~~--------~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~ 168 (841)
..|.+. +.|.+..+.| .|..||.+..|.. |.... -.|.+ .|.+.. .|.|++||. |..
T Consensus 250 ~~C~~~-g~C~~~~~~C----~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~----G~~ 317 (423)
T 2gy5_A 250 EGCKSY-VFCLPDPYGC----SCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ----GLQ 317 (423)
T ss_dssp TTTTTC-CEEETTTTEE----ECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB----STT
T ss_pred CCCCCC-CEECCCCCeE----EeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc----CCC
Confidence 358776 8898888888 8999998777743 53210 12322 565443 499999997 567
Q ss_pred cccc
Q psy14257 169 CSYL 172 (841)
Q Consensus 169 C~~~ 172 (841)
|+..
T Consensus 318 Ce~~ 321 (423)
T 2gy5_A 318 CERE 321 (423)
T ss_dssp SCBC
T ss_pred CccC
Confidence 7643
No 357
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.16 E-value=0.019 Score=39.86 Aligned_cols=28 Identities=21% Similarity=0.648 Sum_probs=22.0
Q ss_pred CCCCC--CcccCCCCcEEecCCCceecCCCCccc
Q psy14257 139 SDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 139 ~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.+|.+ .|.++.++|+|.|++||. |+.|+
T Consensus 9 ~pC~ngg~C~~~~~~~~C~C~~G~~----G~~Ce 38 (39)
T 1edm_B 9 NPCLNGGSCKDDINSYECWCPFGFE----GKNCE 38 (39)
T ss_dssp CCCCTTCEEEEETTEEEEECCTTCC----STTSC
T ss_pred CCCCCCCEeEcCCCceEeECCCCCc----CCccC
Confidence 36653 799999999999999996 55553
No 358
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.78 E-value=14 Score=43.82 Aligned_cols=490 Identities=8% Similarity=0.015 Sum_probs=227.5
Q ss_pred eEEeccCccccccccccccEEEEeccccc----eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCC-
Q psy14257 222 FVIFSNRHELRGVDLRTFNVIALISSLKN----TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGL- 296 (841)
Q Consensus 222 ~ll~s~~~~I~~~~~~~~~~~~l~~~~~~----~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l- 296 (841)
.|.+....++.+.+.....+..+...... +.++..+. ++. ||+. +. +.|++.+...+.+ . .+..++
T Consensus 100 ~lWigT~~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~-~g~--lwi~-t~-~gl~~~~~~~~~~---~-~~~~~~~ 170 (795)
T 4a2l_A 100 RVWIGTRDGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEIS-PEQ--LLIS-TP-EGLIMFDIKESKF---I-DDSFSTA 170 (795)
T ss_dssp CEEEEESSCEEEEETTTTEEEEECCEETTEECCCCEEEEEE-TTE--EEEE-ET-TEEEEEETTTTEE---E-CSSSCHH
T ss_pred CEEEEeCCchheeCCCCCeEEeccccccCCCceEEEEEECC-CCC--EEEE-EC-CceEEEECCCCEE---E-eccCCCC
Confidence 44445556777777665554443221111 22332222 233 5554 33 5677776543321 1 111111
Q ss_pred -CC-ccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccc-cCcCCCceEEEEccCCEEEEEeCCCCeE
Q psy14257 297 -ST-AEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTV 373 (841)
Q Consensus 297 -~~-p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~-~~~~~P~glavD~~~~~lYwaD~~~~~I 373 (841)
.. ...+..|.. +++|+. + ..+.|.+.+........+.. ..-.....|..|. .+.|+++. ..+.|
T Consensus 171 ~~~~i~~i~~d~~-g~lwig-t---------~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~g~lwigt-~~~Gl 237 (795)
T 4a2l_A 171 MHKTIASTLYRQG-DQIYIG-T---------STDGLYTYSITQKTFEKVIPILGTKQIQAILQQS-PTRIWVAT-EGAGL 237 (795)
T ss_dssp HHTCCEEEEEEET-TEEEEE-E---------SSSCEEEEETTTCCEEECC----CCCEEEEEEEE-TTEEEEEE-BSSCE
T ss_pred CCcceEEEEECCC-CCEEEE-E---------CCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcC-CCCEEEEE-CCCCe
Confidence 11 445667643 345442 1 12368888765544333321 1122345667775 45665554 33347
Q ss_pred EEEEecCCccEEEEeeeeecCCCccccCCCCCCcccc-ccceEEEEecCCCcEEEEccCCceEEEEecC-----CC--CC
Q psy14257 374 ESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLW-IGKNLYWVESNLDQIEVAKLSGQFRRTLIAG-----DM--ES 445 (841)
Q Consensus 374 ~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw-~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~-----~l--~~ 445 (841)
.+++......+.+.... .....++.....++.. ..++|++... . -|.+++........+... .+ ..
T Consensus 238 ~~~~~~~~~~~~~~~~~----~~~~~l~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (795)
T 4a2l_A 238 FLINPKTKEIKNYLHSP----SNPKSISSNYIRSLAMDSQNRLWIGTF-N-DLNIYHEGTDSFASYSSNPVENGSLSQRS 311 (795)
T ss_dssp EEEETTTTEEEEECCCT----TCTTSCSCSBEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEEECCCTTSTTSCSSSC
T ss_pred EEEeCCCCeEEEeecCC----CCccccCCCeEEEEEEcCCCCEEEEeC-C-hhheEcCCCCeEEEEecCCCCCCCCCCCc
Confidence 77777654433321100 0000011000001101 1255665443 2 466777665444333221 11 34
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCC--CCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRG--AWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~--~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
.+.|..|.. |.|++...+ ..|.+.+......+.+..... ...+ .....|+.|. +++|++... .+.|.+++.
T Consensus 312 i~~i~~D~~-g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~-~~~l~~~~V~~i~~d~-~g~lWiGt~-~~Gl~~~~~ 384 (795)
T 4a2l_A 312 VRSIFMDSQ-GGMWLGTYF---GGLNYYHPIRNRFKNIRNIPY-KNSLSDNVVSCIVEDK-DKNLWIGTN-DGGLNLYNP 384 (795)
T ss_dssp EEEEEECTT-SCEEEEESS---SCEEEECGGGGSSEEECCCTT-SSSCSCSSEEEEEECT-TSCEEEEES-SSCEEEECT
T ss_pred EEEEEEeCC-cCEEEEECC---CCeEEeCCCcccceEEcCCCC-CCCCCCCeeEEEEECC-CCCEEEEEC-CCCeEEEcC
Confidence 678999975 778776643 568888765444333322100 0111 2346778884 577776654 456888887
Q ss_pred CCCeeEEEEcCC---C-CC--CcceEEEEe-cCe-EEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCC
Q psy14257 524 DGKDHHVVLSNH---D-SL--THPFAIALF-ENH-VYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPC 595 (841)
Q Consensus 524 dG~~~~~i~~~~---~-~l--~~P~gla~~-~~~-lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C 595 (841)
.....+.+.... . .+ ....+|+.+ ++. ||+.-. .+.|.++++.+++-.. +... . +.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~-~~Gl~~~d~~~~~~~~-~~~~--~-------~~----- 448 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTH-AGGLSILHRNSGQVEN-FNQR--N-------SQ----- 448 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEET-TTEEEEEETTTCCEEE-ECTT--T-------SC-----
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeC-cCceeEEeCCCCcEEE-eecC--C-------CC-----
Confidence 755444443211 0 11 234566665 467 777654 3568888876654222 1100 0 00
Q ss_pred CCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEeecCCeEEEEecCCCCcccccee----ecCCCCCc
Q psy14257 596 EMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHTIPTI----SIPQVFSP 671 (841)
Q Consensus 596 ~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~~~~i~~~~l~~~~~~~~~~~----~~~~~~~~ 671 (841)
. +.....+ +..| ....|.+++...+..++.+.......... .+ ....+
T Consensus 449 l-------------~~~~v~~-------i~~d-------~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~-~~~~i 500 (795)
T 4a2l_A 449 L-------------VNENVYA-------ILPD-------GEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPV-VSKQI 500 (795)
T ss_dssp C-------------SCSCEEE-------EEEC-------SSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBC-CCCCE
T ss_pred c-------------CCCeeEE-------EEEC-------CCCCEEEEecCceeEEeCCCCeEEEcccccccccc-CCceE
Confidence 0 0001111 1111 11224444446676666543211111100 01 11346
Q ss_pred eEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCc
Q psy14257 672 NNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQN 751 (841)
Q Consensus 672 ~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~ 751 (841)
.+|..| ..+.||+... +-|++.+..+... . | ...... . .-....+.+|+.|.. ++
T Consensus 501 ~~i~~d-~~g~lWigt~--~Gl~~~~~~~~~~-~--------~-~~~~~~---------~--~l~~~~i~~i~~d~~-g~ 555 (795)
T 4a2l_A 501 TTLFRD-SHKRLWIGGE--EGLSVFKQEGLDI-Q--------K-ASILPV---------S--NVTKLFTNCIYEASN-GI 555 (795)
T ss_dssp EEEEEC-TTCCEEEEES--SCEEEEEEETTEE-E--------E-CCCSCS---------C--GGGGSCEEEEEECTT-SC
T ss_pred EEEEEC-CCCCEEEEeC--CceEEEeCCCCeE-E--------E-ecCCCC---------C--CCCCCeeEEEEECCC-CC
Confidence 778788 4566776663 6788888765441 0 0 000000 0 001234677888854 45
Q ss_pred EEEEecCCCCCeEEEEecCCcceEEEEc-CCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEE
Q psy14257 752 MFIAVSSPTQSKIVVCNLEGEYQTTILS-NESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 828 (841)
Q Consensus 752 LYw~~~~~~~~~I~v~~l~g~~~~~~~~-~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l 828 (841)
|+++- .+.|.+.+.....-+.+-. ++.. -....+|+.|+. |.|+.... . -|.+.+.+...-+.+
T Consensus 556 lWigT----~~Gl~~~d~~~~~~~~~~~~~gl~----~~~i~~i~~d~~-g~lWi~t~-~---Gl~~~~~~~~~~~~~ 620 (795)
T 4a2l_A 556 IWVGT----REGFYCFNEKDKQIKRYNTTNGLP----NNVVYGILEDSF-GRLWLSTN-R---GISCFNPETEKFRNF 620 (795)
T ss_dssp EEEEE----SSCEEEEETTTTEEEEECGGGTCS----CSCEEEEEECTT-SCEEEEET-T---EEEEEETTTTEEEEE
T ss_pred EEEEe----CCCceeECCCCCcEEEeCCCCCCc----hhheEEEEECCC-CCEEEEcC-C---ceEEEcCCCCcEEEc
Confidence 66652 2367777766543322222 1100 135778888864 77766653 2 277776665444433
No 359
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=93.65 E-value=0.024 Score=44.11 Aligned_cols=40 Identities=23% Similarity=0.628 Sum_probs=30.0
Q ss_pred ccccccccCCCCCC--Cccc-----CCCCcEEecCCCceecCCCCccc-ccccc
Q psy14257 130 FCDEKQCLRSDCHH--DCYN-----TPEGFMCVCPRDMYLQPDLITCS-YLHPC 175 (841)
Q Consensus 130 ~C~eC~~~~~~C~~--~C~~-----~~g~~~C~C~~Gy~l~~d~~~C~-~~~eC 175 (841)
.|++|.. .+|.+ .|.+ ..++|.|.|++||. |..|+ ++++|
T Consensus 5 ~c~~C~~--~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~ 52 (63)
T 1hae_A 5 KCAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMK 52 (63)
T ss_dssp ECCHHHH--TTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSS
T ss_pred ccCCCCC--CcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCcc
Confidence 3677753 36754 7886 67899999999997 67886 67766
No 360
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=93.64 E-value=9.7 Score=41.36 Aligned_cols=309 Identities=11% Similarity=0.007 Sum_probs=151.0
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
+++.++-...+.|.+.++........+.........++++ .+.|+.... .+.|...+++......... ..
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~---dg~i~vwd~~~~~~~~~~~-----~h 198 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGST---DRTLKVWNAETGECIHTLY-----GH 198 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEET---TSCEEEEETTTTEEEEEEC-----CC
T ss_pred CCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeC---CCeEEEEECCcCcEEEEEC-----CC
Confidence 4455555567788888876433333333334456778886 345544443 4677777765432222221 22
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcce
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDV 572 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~ 572 (841)
-.....++++ ++.|+.+ ...+.|...++........+..+ ......+++.+..|+ +-...+.|...+..+++..
T Consensus 199 ~~~v~~~~~~--~~~l~s~-s~dg~i~~wd~~~~~~~~~~~~~--~~~v~~~~~~~~~l~-~~~~dg~i~iwd~~~~~~~ 272 (445)
T 2ovr_B 199 TSTVRCMHLH--EKRVVSG-SRDATLRVWDIETGQCLHVLMGH--VAAVRCVQYDGRRVV-SGAYDFMVKVWDPETETCL 272 (445)
T ss_dssp SSCEEEEEEE--TTEEEEE-ETTSEEEEEESSSCCEEEEEECC--SSCEEEEEECSSCEE-EEETTSCEEEEEGGGTEEE
T ss_pred CCcEEEEEec--CCEEEEE-eCCCEEEEEECCCCcEEEEEcCC--cccEEEEEECCCEEE-EEcCCCEEEEEECCCCcEe
Confidence 2334566665 4555544 45678888888754433333222 223456666444444 4445667777776555433
Q ss_pred EEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEe-ecCCeEEEEe
Q psy14257 573 TLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIF-SRPREIRGVD 651 (841)
Q Consensus 573 ~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~-~~~~~i~~~~ 651 (841)
..+... .+...+...++ .+|+. +..+.|+..+
T Consensus 273 ~~~~~~--------------------------------~~~v~~~~~~~---------------~~l~~~~~d~~i~i~d 305 (445)
T 2ovr_B 273 HTLQGH--------------------------------TNRVYSLQFDG---------------IHVVSGSLDTSIRVWD 305 (445)
T ss_dssp EEECCC--------------------------------SSCEEEEEECS---------------SEEEEEETTSCEEEEE
T ss_pred EEecCC--------------------------------CCceEEEEECC---------------CEEEEEeCCCeEEEEE
Confidence 322210 00011111111 12222 2344566566
Q ss_pred cCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEE
Q psy14257 652 LEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQL 731 (841)
Q Consensus 652 l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (841)
+..... ...+. .....+.+++++ .+.++.. ...+.|+..++.... ...
T Consensus 306 ~~~~~~--~~~~~-~~~~~v~~~~~~--~~~l~~~-~~dg~i~vwd~~~~~--------------------------~~~ 353 (445)
T 2ovr_B 306 VETGNC--IHTLT-GHQSLTSGMELK--DNILVSG-NADSTVKIWDIKTGQ--------------------------CLQ 353 (445)
T ss_dssp TTTCCE--EEEEC-CCCSCEEEEEEE--TTEEEEE-ETTSCEEEEETTTCC--------------------------EEE
T ss_pred CCCCCE--EEEEc-CCcccEEEEEEe--CCEEEEE-eCCCeEEEEECCCCc--------------------------EEE
Confidence 543321 11111 111234556665 3444444 467888888875443 111
Q ss_pred EeeC---CCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCC-cceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEe
Q psy14257 732 VVDA---GISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEG-EYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSN 807 (841)
Q Consensus 732 i~~~---~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g-~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d 807 (841)
.+.. ....+..|+++ ++.|+.. ...++|.+.++.. +....+..... ...-..+.+++++|...+|....
T Consensus 354 ~~~~~~~~~~~v~~~~~~--~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~la~~~ 426 (445)
T 2ovr_B 354 TLQGPNKHQSAVTCLQFN--KNFVITS---SDDGTVKLWDLKTGEFIRNLVTLES--GGSGGVVWRIRASNTKLVCAVGS 426 (445)
T ss_dssp EECSTTSCSSCEEEEEEC--SSEEEEE---ETTSEEEEEETTTCCEEEEEEECTT--GGGTCEEEEEEECSSEEEEEEEC
T ss_pred EEccCCCCCCCEEEEEEC--CCEEEEE---eCCCeEEEEECCCCceeeeeecccc--CCCCceEEEEEecCCEEEEEEcc
Confidence 2221 33456677776 4444444 3578999999864 44444421100 00135678888988633333332
Q ss_pred cCCC-cceEEEEecCCC
Q psy14257 808 VTKQ-VVTIEMAFMDGT 823 (841)
Q Consensus 808 ~~~~-~~~I~~~~~dG~ 823 (841)
..+. ..+|.-.+++..
T Consensus 427 ~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 427 RNGTEETKLLVLDFDVD 443 (445)
T ss_dssp SSSSSCCEEEEEECCCC
T ss_pred cCCCCccEEEEEECCCC
Confidence 2221 124666665543
No 361
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.49 E-value=0.036 Score=41.68 Aligned_cols=35 Identities=29% Similarity=0.842 Sum_probs=24.8
Q ss_pred cccccccCCCCCC--Cc-----ccCCCCcEEecCCCceecCCCCcccc
Q psy14257 131 CDEKQCLRSDCHH--DC-----YNTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 131 C~eC~~~~~~C~~--~C-----~~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
|+||.. .+|.+ .| .+..++|.|.|++||. |+.|+.
T Consensus 8 ~~eC~s--~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE~ 49 (55)
T 3u7u_G 8 CAEKEK--TFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQN 49 (55)
T ss_dssp CCSTTT--TTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSCE
T ss_pred CCCCcC--CCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcCc
Confidence 577763 47754 78 4667899999999997 666753
No 362
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.46 E-value=12 Score=44.37 Aligned_cols=265 Identities=6% Similarity=-0.074 Sum_probs=132.6
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEecc--CCEEEEEeCCCCeEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQ--LTRIYWIDAKSDSIH 519 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~--~~~LYw~d~~~~~I~ 519 (841)
.......++++|.+.+|+.... .+.|...++.+.....+.... ..-.....+++.+. +..|+ +-...+.|.
T Consensus 8 H~~~V~~l~~s~dg~~latg~~---dg~I~vwd~~~~~~~~~~~l~---~h~~~V~~l~~s~~~~~~~l~-s~s~Dg~I~ 80 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSS---DKTIKIFEVEGETHKLIDTLT---GHEGPVWRVDWAHPKFGTILA-SCSYDGKVL 80 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEET---TTEEEEEEEETTEEEEEEEEC---CCSSCEEEEEECCTTSCSEEE-EEETTSCEE
T ss_pred CcceeEEEEECCCCCeEEEEEC---CCcEEEEecCCCCCccceecc---CCcCceEEEEecCCCCCCEEE-EEeCCCeEE
Confidence 3455678888887666665543 456666666543333332211 22334567888655 44444 444567888
Q ss_pred EEEcCCCeeEEEEcCCCCCCcceEEEEe-c--CeEEEEeCCCCeEEEEeccCCcceE--EEecccCCCceeccCCcccCC
Q psy14257 520 TVTYDGKDHHVVLSNHDSLTHPFAIALF-E--NHVYWTDWRTNSVIRANKWNGSDVT--LIQRTLTQPFIYVNGVVKKSP 594 (841)
Q Consensus 520 ~~~~dG~~~~~i~~~~~~l~~P~gla~~-~--~~lY~td~~~~~i~~~~~~~g~~~~--~i~~~~~~p~~~h~qp~~~n~ 594 (841)
..++++.....+............+++. . +.++++-...+.|...+..++.... .+....
T Consensus 81 vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~--------------- 145 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA--------------- 145 (753)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS---------------
T ss_pred EEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC---------------
Confidence 8888876532222221112334666763 2 4555555566777766655443221 111100
Q ss_pred CCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEEEecCCCCccccceeec-CCCCCce
Q psy14257 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRGVDLEHPYYHTIPTISI-PQVFSPN 672 (841)
Q Consensus 595 C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~~~l~~~~~~~~~~~~~-~~~~~~~ 672 (841)
+....+ +..|.. +..++.........+|+.+ ..+.|+..++............+ .....+.
T Consensus 146 -----~~v~~l----------~~~p~~--~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 146 -----IGVNSA----------SWAPAT--IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp -----SCEEEE----------EECCCC-----------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred -----CceEEE----------EecCcc--cccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEE
Confidence 000000 001110 0000000000123334444 34556666665432211111111 1234578
Q ss_pred EEEEecCC--CEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEe--eCCCCCcceeEEeec
Q psy14257 673 NLNFDAAN--KKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVV--DAGISHPSGLAIDWI 748 (841)
Q Consensus 673 ~v~~d~~~--~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~~~~~~p~glAvD~~ 748 (841)
+++|.|.. +.+..+-...+.|+..++....... ...+. ......+.+|++++.
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~-----------------------~~~~~~~~~~~~~v~~l~~spd 265 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW-----------------------KKTLLKEEKFPDVLWRASWSLS 265 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC-----------------------BCCBSSSSCCSSCCCCEEECTT
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc-----------------------eeEEeccCCCCCceEEEEEcCC
Confidence 99999984 4555555578889988887643000 00000 123456788999988
Q ss_pred CCcEEEEecCCCCCeEEEEecCC
Q psy14257 749 AQNMFIAVSSPTQSKIVVCNLEG 771 (841)
Q Consensus 749 ~~~LYw~~~~~~~~~I~v~~l~g 771 (841)
++.|+.. ...+.|.+.+++.
T Consensus 266 g~~l~s~---s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 266 GNVLALS---GGDNKVTLWKENL 285 (753)
T ss_dssp TCCEEEE---CSSSCEECCBCCS
T ss_pred CCEEEEE---cCCCEEEEEecCC
Confidence 8777666 3467899998874
No 363
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=93.44 E-value=8 Score=39.77 Aligned_cols=205 Identities=9% Similarity=0.021 Sum_probs=105.9
Q ss_pred CceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeee-cCCCccccCCCCCCccccc-cceEEEEecCCCcEEEE
Q psy14257 351 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVL-GSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIEVA 428 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~-~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~v~ 428 (841)
-..|++.+..+.+.++-...++|...++.............+ +....+ .++.|. .+++.++-...+.|...
T Consensus 41 V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V-------~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 41 VTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFV-------SDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp EEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCE-------EEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCE-------EEEEECCCCCEEEEEcccccceEE
Confidence 456777777666666666677788777765432211111111 000000 011121 14444455556777777
Q ss_pred ccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccC-CE
Q psy14257 429 KLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQL-TR 507 (841)
Q Consensus 429 ~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~-~~ 507 (841)
+...................+...+...+|+.... ...+...++.+.....+... ........+++.+.. ..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~---d~~~~~~d~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR---DKTIKLWNTLGVCKYTVQDE----SHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET---TSCEEEECTTSCEEEEECSS----SCSSCEEEEEECSCSSSC
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecC---CCeEEEEEeCCCceEEEEec----cccCcccceEEccCCCCc
Confidence 77666555444444456667777776666654443 34555555554433332210 122334556665443 34
Q ss_pred EEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEeccCCcc
Q psy14257 508 IYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANKWNGSD 571 (841)
Q Consensus 508 LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~~~g~~ 571 (841)
++++-...+.|...++............ -.....|++. ++.++++-...+.|...+..+++.
T Consensus 187 ~~~s~~~d~~i~i~d~~~~~~~~~~~~h--~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 187 IIVSCGWDKLVKVWNLANCKLKTNHIGH--TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEE
T ss_pred EEEEEcCCCEEEEEECCCCceeeEecCC--CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCce
Confidence 4445555667888888766554444332 1234567764 455555555566776666554443
No 364
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=93.43 E-value=0.002 Score=65.47 Aligned_cols=91 Identities=9% Similarity=-0.061 Sum_probs=54.1
Q ss_pred cccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----cccccc---------------------------CCCCC--CC
Q psy14257 100 FDCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DEKQCL---------------------------RSDCH--HD 144 (841)
Q Consensus 100 ~~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~eC~~~---------------------------~~~C~--~~ 144 (841)
.+|.++ ++|+.. +|.| .|+.||....| ++|... ..+|. .+
T Consensus 105 ~pC~ng-G~C~~~~~sy~C----~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~ 179 (267)
T 4fbr_A 105 IKSNDG-GKTLTGTTTYNG----EGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGK 179 (267)
T ss_dssp EECSST-TSEEEEEEEETT----SCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTS
T ss_pred CCCCCC-CEEecCCccEEe----eCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCE
Confidence 358887 889886 8889 89999876555 222100 01232 26
Q ss_pred cccCCCCcEEecCCCceecCCCCcccc-ccccCCCCCccC-ceeecCCCCceEEeecCCe
Q psy14257 145 CYNTPEGFMCVCPRDMYLQPDLITCSY-LHPCEAWGTCSQ-DCEPSVSNNSYKCTCHAGY 202 (841)
Q Consensus 145 C~~~~g~~~C~C~~Gy~l~~d~~~C~~-~~eC~~~~~Cs~-~C~~~~~~g~~~C~C~~G~ 202 (841)
|.+...+|+|.|++||. ++.|+. +++|+....|.. .|.+ .+.+.|.|..++
T Consensus 180 C~dg~~~y~C~Cp~Gf~----G~~c~~~i~ec~~~~~c~~~~c~~---gG~~~~~C~~g~ 232 (267)
T 4fbr_A 180 TLSGTMTYNGEGPIGFR----GTLTSPDTYTVENQWGGSTAPWNP---GGFWMIGARNGQ 232 (267)
T ss_dssp EEEEEEEETTSCCEEEE----EEEEETTEEEEEEECSCTTSCCEE---EEEEECCCCTTC
T ss_pred eeCCCCCeEEeCCCCcc----ccccccccceeccCCCccCCcccC---CCeEEEecCCCC
Confidence 77777888888888886 446653 455543333433 3333 455555565554
No 365
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.35 E-value=9.8 Score=45.07 Aligned_cols=177 Identities=8% Similarity=-0.011 Sum_probs=91.9
Q ss_pred CEEEEccCCC-ccccccccCcCCCceEEEEccCCEEEEEeCCC----CeEEEEEecCCcc--EEEEeeeeecCCCccccC
Q psy14257 329 GIEKAGMHGE-NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL----NTVESVRVDGSER--TVSFNLEVLGSDSRVGIP 401 (841)
Q Consensus 329 ~I~~~~~dG~-~~~~l~~~~~~~P~glavD~~~~~lYwaD~~~----~~I~~~~ldG~~~--~~~~~~~~~~~~~~~~i~ 401 (841)
.|++.++++. ....-.... ...++++.++++.||++.... ..|++.++.+... +.++.... .....+
T Consensus 202 ~l~v~dl~~g~~~l~~~~~~--~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~--~~~~~~-- 275 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVSG--TNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN--PLFSAF-- 275 (751)
T ss_dssp EEEEEETTCTTCCCCCCEEE--ECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC--TTCEEE--
T ss_pred EEEEEECCCCCEeCCccccC--ceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC--CceEEE--
Confidence 5999998875 421111111 146788999888888876431 4789999977642 23332110 000000
Q ss_pred CCCCCccccccceEEEEec--CCCcEEEEccCCc--eE--EEEecCCCCCc-eeEEEcCCCCeEEEE-ecC-CCCCeEEE
Q psy14257 402 NCRPEDNLWIGKNLYWVES--NLDQIEVAKLSGQ--FR--RTLIAGDMESP-RAIALDPRFGLLFWT-DWD-SKAPRIER 472 (841)
Q Consensus 402 ~~~~~avdw~~~~LY~tD~--~~~~I~v~~~~G~--~~--~~l~~~~l~~P-~giavd~~~g~Ly~t-d~~-~~~~~I~r 472 (841)
.++...++.|+|+.. ....|++.++++. .. +.+.. ....| ..+.. ..++.||+. +.. ....+|++
T Consensus 276 ----~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~s~~~-~~g~~l~~~t~~~~a~~~~L~~ 349 (751)
T 2xe4_A 276 ----MYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP-REKGVRYDVQM-HGTSHLVILTNEGGAVNHKLLI 349 (751)
T ss_dssp ----EEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC-CCTTCCEEEEE-ETTTEEEEEECTTTCTTCEEEE
T ss_pred ----EEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec-CCCCceEEEee-eeCCEEEEEeCCCCCCCcEEEE
Confidence 011223356776543 2457888888753 22 33332 22223 22221 235666665 432 24679999
Q ss_pred ecCCC-CCcEE-EEEecccCCCCCCceeEEEeccCCEEEEEeCC--CCeEEEEEc
Q psy14257 473 CSMSG-EHRSV-IVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK--SDSIHTVTY 523 (841)
Q Consensus 473 ~~ldG-~~~~~-i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~--~~~I~~~~~ 523 (841)
+++++ ...+. ++.. ..-....++++ .++.||++-.. ..+|+.+++
T Consensus 350 ~d~~~~~~~~~~li~~----~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 350 APRGQPSDWSHVLVDH----SEDVFMESIAV--RSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EETTSTTCCCCEEECC----CSSEEEEEEEE--CSSEEEEEEEETTEEEEEEEEC
T ss_pred EcCCCcccceeeEECC----CCCcEEEEEEE--ECCEEEEEEEeCCEEEEEEEec
Confidence 99984 33333 4331 11112244555 46788876543 347778885
No 366
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.20 E-value=8.4 Score=39.36 Aligned_cols=122 Identities=7% Similarity=-0.051 Sum_probs=66.4
Q ss_pred CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC-Cc-EEEEEecccCCCCCCceeEEEecc-CCEEEEEeCCCCe
Q psy14257 441 GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE-HR-SVIVRVDLLTSRGAWPNGLTLDYQ-LTRIYWIDAKSDS 517 (841)
Q Consensus 441 ~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~-~~-~~i~~~~~~~~~~~~P~glalD~~-~~~LYw~d~~~~~ 517 (841)
+.......|+++|...+|+.... .+.|...+++.. .. +.+.... ..-.....+++.+. +++++++-...+.
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSS---DQHIKVFKLDKDTSNWELSDSWR---AHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEET---TSEEEEEEECSSSCCEEEEEEEE---CCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccccceeEEEEcCCCCEEEEeeC---CCeEEEEECCCCCCcceecceec---cCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 34456788999987666665543 356666666532 21 2222110 23345678888764 2444445445678
Q ss_pred EEEEEcCCCe---------eEEEEcCCCCCCcceEEEEec---CeEEEEeCCCCeEEEEeccCCc
Q psy14257 518 IHTVTYDGKD---------HHVVLSNHDSLTHPFAIALFE---NHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 518 I~~~~~dG~~---------~~~i~~~~~~l~~P~gla~~~---~~lY~td~~~~~i~~~~~~~g~ 570 (841)
|...+++... ........ -.....+++.. +.++++-...+.|...+..+++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDS--KGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred EEEEecCCCcccccccCcceeeeeccc--CCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 8888887642 11222221 23346677742 4555554556677777655544
No 367
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=93.13 E-value=8.2 Score=39.03 Aligned_cols=275 Identities=10% Similarity=0.005 Sum_probs=142.8
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTV 521 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~ 521 (841)
.-.....|++ +.+++|+.... .+.|...+++......... ..-.....+++.+.+..|+.+. ..+.|...
T Consensus 17 h~~~v~~~~~-~~~~~l~s~~~---dg~v~vw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~ 86 (313)
T 3odt_A 17 HDQDVRDVVA-VDDSKVASVSR---DGTVRLWSKDDQWLGTVVY-----TGQGFLNSVCYDSEKELLLFGG-KDTMINGV 86 (313)
T ss_dssp CSSCEEEEEE-EETTEEEEEET---TSEEEEEEESSSEEEEEEE-----ECSSCEEEEEEETTTTEEEEEE-TTSCEEEE
T ss_pred CCCCcEEEEe-cCCCEEEEEEc---CCcEEEEECCCCEEEEEee-----cCCccEEEEEECCCCCEEEEec-CCCeEEEE
Confidence 3456678888 76667665553 4667777765544333333 2345678899998766666555 46777777
Q ss_pred EcCCCe----eEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCC
Q psy14257 522 TYDGKD----HHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEM 597 (841)
Q Consensus 522 ~~dG~~----~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~ 597 (841)
++.... ...+ ..+ -.....+++.++.|+.+ ...+.|...+ .++....+.....
T Consensus 87 ~~~~~~~~~~~~~~-~~~--~~~i~~~~~~~~~l~~~-~~d~~i~~~d--~~~~~~~~~~~~~----------------- 143 (313)
T 3odt_A 87 PLFATSGEDPLYTL-IGH--QGNVCSLSFQDGVVISG-SWDKTAKVWK--EGSLVYNLQAHNA----------------- 143 (313)
T ss_dssp ETTCCTTSCC-CEE-CCC--SSCEEEEEEETTEEEEE-ETTSEEEEEE--TTEEEEEEECCSS-----------------
T ss_pred EeeecCCCCcccch-hhc--ccCEEEEEecCCEEEEE-eCCCCEEEEc--CCcEEEecccCCC-----------------
Confidence 765431 2222 111 22335666655554444 4456666665 2222222221100
Q ss_pred CCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEe-ecCCeEEEEecCCCCccccceeecCCCCCceEEEE
Q psy14257 598 NNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIF-SRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNF 676 (841)
Q Consensus 598 ~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~-~~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 676 (841)
....++. .| ....+|+. +....|+..+... ....+.......+..+++
T Consensus 144 ---~v~~~~~----------~~--------------~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~i~~~~~ 192 (313)
T 3odt_A 144 ---SVWDAKV----------VS--------------FSENKFLTASADKTIKLWQNDK----VIKTFSGIHNDVVRHLAV 192 (313)
T ss_dssp ---CEEEEEE----------EE--------------TTTTEEEEEETTSCEEEEETTE----EEEEECSSCSSCEEEEEE
T ss_pred ---ceeEEEE----------cc--------------CCCCEEEEEECCCCEEEEecCc----eEEEEeccCcccEEEEEE
Confidence 0000000 00 01111222 2233344443111 111111212345678888
Q ss_pred ecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEe
Q psy14257 677 DAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAV 756 (841)
Q Consensus 677 d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~ 756 (841)
.+... + ++-...+.|+..++.... ....+......+..|++.+.+ .|+..
T Consensus 193 ~~~~~-~-~~~~~dg~i~i~d~~~~~--------------------------~~~~~~~~~~~i~~~~~~~~~-~l~~~- 242 (313)
T 3odt_A 193 VDDGH-F-ISCSNDGLIKLVDMHTGD--------------------------VLRTYEGHESFVYCIKLLPNG-DIVSC- 242 (313)
T ss_dssp EETTE-E-EEEETTSEEEEEETTTCC--------------------------EEEEEECCSSCEEEEEECTTS-CEEEE-
T ss_pred cCCCe-E-EEccCCCeEEEEECCchh--------------------------hhhhhhcCCceEEEEEEecCC-CEEEE-
Confidence 87766 4 444467888888886544 222333455678889998877 45544
Q ss_pred cCCCCCeEEEEecCCcc-eEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCC
Q psy14257 757 SSPTQSKIVVCNLEGEY-QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGT 823 (841)
Q Consensus 757 ~~~~~~~I~v~~l~g~~-~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~ 823 (841)
...++|.+.++.... ...+... .....+|++.|... |+-... . +.|..-+++..
T Consensus 243 --~~dg~v~iwd~~~~~~~~~~~~~-------~~~i~~~~~~~~~~-~~~~~~-d--g~i~iw~~~~~ 297 (313)
T 3odt_A 243 --GEDRTVRIWSKENGSLKQVITLP-------AISIWSVDCMSNGD-IIVGSS-D--NLVRIFSQEKS 297 (313)
T ss_dssp --ETTSEEEEECTTTCCEEEEEECS-------SSCEEEEEECTTSC-EEEEET-T--SCEEEEESCGG
T ss_pred --ecCCEEEEEECCCCceeEEEecc-------CceEEEEEEccCCC-EEEEeC-C--CcEEEEeCCCC
Confidence 357889999986554 3333333 34778999988754 332222 2 34666655543
No 368
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.91 E-value=5.9 Score=39.00 Aligned_cols=107 Identities=9% Similarity=0.038 Sum_probs=60.1
Q ss_pred CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecC--CCCCc-----EEEEEecccCCCCCCceeEEEeccCCEEEEEeCC
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSM--SGEHR-----SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK 514 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~l--dG~~~-----~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~ 514 (841)
+...=.+|.+|++ |.||... .++|+|.+. ++... ..|.. .....-.-|.+|+ ++.||-+.
T Consensus 86 Gw~~F~a~~fD~~-G~LYav~----dG~iyr~~pP~~~~~~Wl~~a~~vg~-----~gw~~~~~lff~p-~G~Lyav~-- 152 (236)
T 1tl2_A 86 GWNQFQFLFFDPN-GYLYAVS----KDKLYKASPPQSDTDNWIARATEVGS-----GGWSGFKFLFFHP-NGYLYAVH-- 152 (236)
T ss_dssp CGGGCSEEEECTT-SCEEEEE----TTEEEEESCCCSTTCCHHHHSEEEEC-----SSGGGEEEEEECT-TSCEEEEE--
T ss_pred ccccceEEEECCC-CCEEEeC----CCEEEEeCCCcCCCCceeccccEecc-----CCCCceEEEEECC-CceEEEEe--
Confidence 3333568999975 9999993 479999987 44321 33333 3444457888985 68899877
Q ss_pred CCeEEEE-EcCCC------eeEEEEcCCCCCCcceEEEE-ecCeEEEEeCCCCeEEEEe
Q psy14257 515 SDSIHTV-TYDGK------DHHVVLSNHDSLTHPFAIAL-FENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 515 ~~~I~~~-~~dG~------~~~~i~~~~~~l~~P~gla~-~~~~lY~td~~~~~i~~~~ 565 (841)
.+++++- .+.+. ..+++.... --..++ |.. .++.||+.. .+.+++..
T Consensus 153 dg~lyr~~~P~~~~~~wl~~~~~~g~~g-~~~yr~-l~f~~~G~l~~v~--~g~~Y~~~ 207 (236)
T 1tl2_A 153 GQQFYKALPPVSNQDNWLARATKIGQGG-WDTFKF-LFFSSVGTLFGVQ--GGKFYEDY 207 (236)
T ss_dssp TTEEEEECCCSSTTCCHHHHCEEEESSS-GGGEEE-EEECTTSCEEEEE--TTEEEEES
T ss_pred CCcEEecCCCCCCCcccccccceeccCC-cceEEE-EEECCCCcEEEEe--CCeEEecC
Confidence 4556543 33221 122222121 111122 222 357787777 66676654
No 369
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=92.91 E-value=4.4 Score=42.81 Aligned_cols=95 Identities=8% Similarity=-0.099 Sum_probs=49.9
Q ss_pred CCCcEEEEccCCce---EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCC----cEEEEEecccCCCC
Q psy14257 421 NLDQIEVAKLSGQF---RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH----RSVIVRVDLLTSRG 493 (841)
Q Consensus 421 ~~~~I~v~~~~G~~---~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~----~~~i~~~~~~~~~~ 493 (841)
..+.|.+.++.... ....+.........++++|...+|+.... .+.|...+++... ...+.. ..-
T Consensus 75 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~iwd~~~~~~~~~~~~~~~-----~h~ 146 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSG---ARVISVCYFEQENDWWVSKHLKR-----PLR 146 (377)
T ss_dssp TTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEES---SSCEEECCC-----CCCCEEECS-----SCC
T ss_pred CCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEec---CCeEEEEEECCcccceeeeEeec-----ccC
Confidence 34556666655432 11222233356778999987666666554 3567777776543 222211 134
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcC
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD 524 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~d 524 (841)
.....+++.+.+..|+.+. ..+.|...++.
T Consensus 147 ~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~ 176 (377)
T 3dwl_C 147 STILSLDWHPNNVLLAAGC-ADRKAYVLSAY 176 (377)
T ss_dssp SCEEEEEECTTSSEEEEEE-SSSCEEEEEEC
T ss_pred CCeEEEEEcCCCCEEEEEe-CCCEEEEEEEE
Confidence 4567899987665555544 45678888764
No 370
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=92.90 E-value=10 Score=39.54 Aligned_cols=231 Identities=8% Similarity=-0.022 Sum_probs=117.5
Q ss_pred eEEEecCCCeEEEEEecCCccc----ceEEEEeCCCCCccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccC-CCc
Q psy14257 265 VFWTDVIDDKIYNATLIGNSLS----NIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMH-GEN 339 (841)
Q Consensus 265 lyw~d~~~~~I~~~~~~~~~~~----~~~~~~~~~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~d-G~~ 339 (841)
+..+-..++.|...++..+... .....+.........+++.+.+ -+++ + ...++.|..+++. |+.
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~--~~l~-s-------~s~D~~v~lwd~~~~~~ 110 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN--CFAI-S-------SSWDKTLRLWDLRTGTT 110 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST--TEEE-E-------EETTSEEEEEETTSSCE
T ss_pred EEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC--CEEE-E-------EcCCCcEEEEECCCCcE
Confidence 6666666777777666432100 1111222222334556665533 2322 1 1235677777765 332
Q ss_pred cccccccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEee-------e--eecCCCccccCCCCCCcccc
Q psy14257 340 RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNL-------E--VLGSDSRVGIPNCRPEDNLW 410 (841)
Q Consensus 340 ~~~l~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~-------~--~~~~~~~~~i~~~~~~avdw 410 (841)
...+ ...-.....+++.+.++.|+-+. ..+.|...++.+......... . .+.++.. ....+..
T Consensus 111 ~~~~-~~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~ 182 (343)
T 2xzm_R 111 YKRF-VGHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMK------SANKVQP 182 (343)
T ss_dssp EEEE-ECCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCC------SCSCCCS
T ss_pred EEEE-cCCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccc------cccccCC
Confidence 2222 22334556788888877776554 567788888765432221100 0 0000000 0000000
Q ss_pred ccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEeccc
Q psy14257 411 IGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLL 489 (841)
Q Consensus 411 ~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~ 489 (841)
.+.++.+-...+.|.+.+..+....++. ........|+++|...+|..... .+.|...++. .........
T Consensus 183 -~~~~l~s~~~d~~i~iwd~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs~---dg~v~iwd~~~~~~~~~~~~---- 253 (343)
T 2xzm_R 183 -FAPYFASVGWDGRLKVWNTNFQIRYTFK-AHESNVNHLSISPNGKYIATGGK---DKKLLIWDILNLTYPQREFD---- 253 (343)
T ss_dssp -SCCEEEEEETTSEEEEEETTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEET---TCEEEEEESSCCSSCSEEEE----
T ss_pred -CCCEEEEEcCCCEEEEEcCCCceeEEEc-CccccceEEEECCCCCEEEEEcC---CCeEEEEECCCCcccceeec----
Confidence 1245556566788888887665554443 33456789999998666554443 4666666662 222222222
Q ss_pred CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCC
Q psy14257 490 TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGK 526 (841)
Q Consensus 490 ~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~ 526 (841)
.-.....+++.+....|.... .+.|...++...
T Consensus 254 --~~~~v~~v~~sp~~~~la~~~--d~~v~iw~~~~~ 286 (343)
T 2xzm_R 254 --AGSTINQIAFNPKLQWVAVGT--DQGVKIFNLMTQ 286 (343)
T ss_dssp --CSSCEEEEEECSSSCEEEEEE--SSCEEEEESSSC
T ss_pred --CCCcEEEEEECCCCCEEEEEC--CCCEEEEEeCCC
Confidence 122367889987655444332 356777777543
No 371
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=92.25 E-value=0.045 Score=55.92 Aligned_cols=41 Identities=22% Similarity=0.531 Sum_probs=31.1
Q ss_pred ccccccC-CCCCccC--ceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 170 SYLHPCE-AWGTCSQ--DCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 170 ~~~~eC~-~~~~Cs~--~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
+++|||. ....|.. .|.|+ .|+|.|.|.+||.. ++..|.++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt--~Gsy~C~C~~Gy~G--nG~~C~d~ 46 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDY--ATGFCCRCVANYTG--NGRQCVAE 46 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEEC--SSCEEEEECTTEEE--CSSSEEET
T ss_pred ccchhccCCCCCCCCCCEeEcC--CCCeEEEcCCCCCC--CCCcCCCC
Confidence 3678896 3467864 79999 99999999999984 67899987
No 372
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=92.11 E-value=0.12 Score=60.18 Aligned_cols=57 Identities=23% Similarity=0.398 Sum_probs=40.2
Q ss_pred cccCCCCCeEecCCCCCCCCCCCCCCCCCcccc------cccccC-CCCCC--CcccCCCCcEEec-CCCceecCCCCcc
Q psy14257 100 FDCQDVLRTCIPKALVCDGEPACFNGEDEMFCD------EKQCLR-SDCHH--DCYNTPEGFMCVC-PRDMYLQPDLITC 169 (841)
Q Consensus 100 ~~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~------eC~~~~-~~C~~--~C~~~~g~~~C~C-~~Gy~l~~d~~~C 169 (841)
..|.++ +.|.. ..| .|..||.+..|. +|...+ ..|++ .|.+ ..|.| ++||. |..|
T Consensus 534 ~~C~~~-G~C~~--g~C----~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~----G~~C 598 (690)
T 3fcs_B 534 EMCSGH-GQCSC--GDC----LCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY----GDTC 598 (690)
T ss_dssp SBGGGS-EEEET--TEE----EECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB----STTS
T ss_pred CCCCCC-CEecC--Cee----ECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc----CCCc
Confidence 468876 89977 667 899999887773 454322 35643 6754 39999 99997 6677
Q ss_pred cc
Q psy14257 170 SY 171 (841)
Q Consensus 170 ~~ 171 (841)
+.
T Consensus 599 e~ 600 (690)
T 3fcs_B 599 EK 600 (690)
T ss_dssp CB
T ss_pred Cc
Confidence 65
No 373
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.08 E-value=18 Score=42.13 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=29.2
Q ss_pred EEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEecCeEEEEe
Q psy14257 500 TLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALFENHVYWTD 555 (841)
Q Consensus 500 alD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~~~~lY~td 555 (841)
++...++.||+.+ ..+.|+.++.. |..+..+.........|... ..++++|++-
T Consensus 464 ~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~-~~~G~~yva~ 518 (668)
T 1kv9_A 464 TLSTAGNLVFQGT-AAGQMHAYSADKGEALWQFEAQSGIVAAPMTF-ELAGRQYVAI 518 (668)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEEE
T ss_pred eeEeCCCEEEEEC-CcccchhhhhhcChhheEecCCCCcccCceEE-EECCEEEEEE
Confidence 3334567788774 45678888765 44444443332223344433 2567777664
No 374
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.86 E-value=15 Score=39.12 Aligned_cols=116 Identities=10% Similarity=-0.030 Sum_probs=69.9
Q ss_pred ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCC
Q psy14257 446 PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 446 P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG 525 (841)
.+.++++|.+.+|+.... .+.|...+++......... ..-.....+++.+.+..|+-+ ...+.|...++..
T Consensus 126 v~~v~~s~dg~~l~s~~~---d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~~~~p~~~~l~s~-s~d~~v~iwd~~~ 196 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAE---DRLIRIWDIENRKIVMILQ-----GHEQDIYSLDYFPSGDKLVSG-SGDRTVRIWDLRT 196 (393)
T ss_dssp EEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEEC-----CCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred EEEEEECCCCCEEEEEcC---CCeEEEEECCCCcEEEEEc-----cCCCCEEEEEEcCCCCEEEEe-cCCCcEEEEECCC
Confidence 568999997666655543 4567777776443322222 233456788898776666544 4467888888876
Q ss_pred CeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceE
Q psy14257 526 KDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVT 573 (841)
Q Consensus 526 ~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~ 573 (841)
......+... .....+++. ++.++.+-...+.|...+..++....
T Consensus 197 ~~~~~~~~~~---~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~ 243 (393)
T 1erj_A 197 GQCSLTLSIE---DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVE 243 (393)
T ss_dssp TEEEEEEECS---SCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEE
T ss_pred CeeEEEEEcC---CCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 5443333321 234566664 45666666666777777766655433
No 375
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=91.81 E-value=15 Score=38.96 Aligned_cols=297 Identities=10% Similarity=0.073 Sum_probs=149.8
Q ss_pred cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEE
Q psy14257 440 AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIH 519 (841)
Q Consensus 440 ~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~ 519 (841)
.+.......|++.|...+|+-... .+.|..-++........+. ........+++.+.+..|. +-...+.|.
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~---D~~v~iWd~~~~~~~~~~~-----~h~~~v~~~~~s~~g~~la-s~~~d~~v~ 133 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQ---DGRLIVWNALTSQKTHAIK-----LHCPWVMECAFAPNGQSVA-CGGLDSACS 133 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEET---TSEEEEEETTTTEEEEEEE-----CCCTTCCCCEECTTSSEEE-ECCSSSCCE
T ss_pred cccccEEEEEEEcCCCCEEEEEeC---CCeEEEEECCCCccceEEe-----cCCCCEEEEEECCCCCEEE-EeeCCCcEE
Confidence 344456789999998666665553 3566666664433333333 3344567888987655554 444456666
Q ss_pred EEEcCCCee-------EEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCc
Q psy14257 520 TVTYDGKDH-------HVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVV 590 (841)
Q Consensus 520 ~~~~dG~~~-------~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~ 590 (841)
..++..... ...+.++ -.....+++. .+..+++-...+.|...+..+|+....+..... .
T Consensus 134 iw~~~~~~~~~~~~~~~~~~~gh--~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~---------~ 202 (380)
T 3iz6_a 134 IFNLSSQADRDGNMPVSRVLTGH--KGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFP---------S 202 (380)
T ss_dssp EEECCCCSSCCCSSTTCCBCCCC--SSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSS---------S
T ss_pred EEECCCCccccCCccceeeccCC--CcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccC---------C
Confidence 666643211 0011111 0111223332 233444555566777777666654443321100 0
Q ss_pred ccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEE-eecCCeEEEEecCCCCccccceeecCCCC
Q psy14257 591 KKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFII-FSRPREIRGVDLEHPYYHTIPTISIPQVF 669 (841)
Q Consensus 591 ~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~-~~~~~~i~~~~l~~~~~~~~~~~~~~~~~ 669 (841)
+ | .....+.. ..+ ....+|+ -+....|+..++...... ...+ .....
T Consensus 203 ~------------h------~~~v~~~~-----~~~-------~~~~~l~sgs~D~~v~~wd~~~~~~~-~~~~-~~h~~ 250 (380)
T 3iz6_a 203 G------------H------TADVLSLS-----INS-------LNANMFISGSCDTTVRLWDLRITSRA-VRTY-HGHEG 250 (380)
T ss_dssp S------------C------CSCEEEEE-----ECS-------SSCCEEEEEETTSCEEEEETTTTCCC-CEEE-CCCSS
T ss_pred C------------C------ccCeEEEE-----eec-------CCCCEEEEEECCCeEEEEECCCCCcc-eEEE-CCcCC
Confidence 0 0 00001100 000 0111222 234456666666422111 1111 11224
Q ss_pred CceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEee-------CCCCCcce
Q psy14257 670 SPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVD-------AGISHPSG 742 (841)
Q Consensus 670 ~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-------~~~~~p~g 742 (841)
.+.+|+|.|....|. +-...++|+..++.... ...+.. .....+..
T Consensus 251 ~v~~v~~~p~~~~l~-s~s~D~~i~lwd~~~~~--------------------------~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 251 DINSVKFFPDGQRFG-TGSDDGTCRLFDMRTGH--------------------------QLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp CCCEEEECTTSSEEE-EECSSSCEEEEETTTTE--------------------------EEEEECCCCSSSCCSSCSCSE
T ss_pred CeEEEEEecCCCeEE-EEcCCCeEEEEECCCCc--------------------------EEEEecccccccccccCceEE
Confidence 578899998776655 44478899999887654 111111 11234688
Q ss_pred eEEeecCCcEEEEecCCCCCeEEEEecCCcce-EEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecC
Q psy14257 743 LAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQ-TTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMD 821 (841)
Q Consensus 743 lAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~-~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~d 821 (841)
+|+.+.++.|+-. ...+.|.+.++..... ..+..-. .+-......|++.|...+|.=..+. ++|..-++.
T Consensus 304 ~~~s~~g~~l~~g---~~dg~i~vwd~~~~~~~~~~~~~~---~~h~~~v~~l~~s~dg~~l~sgs~D---~~i~iW~~~ 374 (380)
T 3iz6_a 304 VAFSISGRLLFAG---YSNGDCYVWDTLLAEMVLNLGTLQ---NSHEGRISCLGLSSDGSALCTGSWD---KNLKIWAFS 374 (380)
T ss_dssp EEECSSSSEEEEE---CTTSCEEEEETTTCCEEEEECCSC---SSCCCCCCEEEECSSSSEEEEECTT---SCEEEEECC
T ss_pred EEECCCCCEEEEE---ECCCCEEEEECCCCceEEEEeccc---CCCCCceEEEEECCCCCEEEEeeCC---CCEEEEecC
Confidence 9999888777666 3578899999764433 3332100 0003467899999976555433332 246555565
Q ss_pred CCc
Q psy14257 822 GTK 824 (841)
Q Consensus 822 G~~ 824 (841)
|..
T Consensus 375 ~~~ 377 (380)
T 3iz6_a 375 GHR 377 (380)
T ss_dssp SSS
T ss_pred CCc
Confidence 543
No 376
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=91.71 E-value=16 Score=39.20 Aligned_cols=278 Identities=13% Similarity=0.033 Sum_probs=138.3
Q ss_pred cccccceEEEEecCCCcEEEEccCC-ceEEEEec-CCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEE
Q psy14257 408 NLWIGKNLYWVESNLDQIEVAKLSG-QFRRTLIA-GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVR 485 (841)
Q Consensus 408 vdw~~~~LY~tD~~~~~I~v~~~~G-~~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~ 485 (841)
+||-.+++.-+- ..+.|++.+... +...++-. ..-.....|++.|.+.+|..... .+.|..-++..........
T Consensus 111 l~wS~~n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~---Dg~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 111 VDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTS---SAEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp EEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEET---TSCEEEEETTTTEEEEEEC
T ss_pred EEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEEC---CCeEEEEEcCCCcEEEEEe
Confidence 567666654332 356788888764 43333322 22344689999998666665543 3566666664332221111
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEE-EEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEE
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHV-VLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIR 563 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~-i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~ 563 (841)
..-.....++.+ .. +..+-...+.+...+........ .+..+ .....++... .+....+-...+.|..
T Consensus 187 -----~h~~~v~~~s~~--~~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h--~~~~~~~~~~~~g~~l~s~~~D~~v~i 256 (420)
T 4gga_A 187 -----SHSARVGSLSWN--SY-ILSSGSRSGHIHHHDVRVAEHHVATLSGH--SQEVCGLRWAPDGRHLASGGNDNLVNV 256 (420)
T ss_dssp -----CCSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -----CCCCceEEEeeC--CC-EEEEEeCCCceeEeeecccceeeEEeccc--ccceeeeeecCCCCeeeeeeccccceE
Confidence 122233444444 33 44444445677777665433222 12221 2233455553 3444444444455544
Q ss_pred EeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-
Q psy14257 564 ANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS- 642 (841)
Q Consensus 564 ~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~- 642 (841)
.+..+++.... +..... . | ...-.....+|.+-. +++.+
T Consensus 257 ~~~~~~~~~~~-------~~~~~~------------~---~----~~~V~~~~~~p~~~~--------------~la~~~ 296 (420)
T 4gga_A 257 WPSAPGEGGWV-------PLQTFT------------Q---H----QGAVKAVAWCPWQSN--------------VLATGG 296 (420)
T ss_dssp EESSCCSSCSC-------CSEEEC------------C---C----SSCEEEEEECTTCTT--------------EEEEEE
T ss_pred Eeeccccccce-------eeeeec------------c---c----CCceeeeeeCCCccc--------------EEEEEe
Confidence 44333321100 000000 0 0 000001122332211 12221
Q ss_pred --cCCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEEC-CCCeEEEEEcccCceeeeeeeeeeeeccccc
Q psy14257 643 --RPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQ-EYNEVKRSSIVGGQIQLVVDAVFEFYLTPLS 719 (841)
Q Consensus 643 --~~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~ 719 (841)
....|+..++..... ... +.....+..+.+.+..+.++.+.. ..++|+..++....
T Consensus 297 gs~D~~I~iwd~~t~~~--~~~--~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~----------------- 355 (420)
T 4gga_A 297 GTSDRHIRIWNVCSGAC--LSA--VDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA----------------- 355 (420)
T ss_dssp CTTTCEEEEEETTTTEE--EEE--EECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-----------------
T ss_pred ecCCCEEEEEeCCcccc--cee--eccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc-----------------
Confidence 234455555543321 111 222345678889999999988764 56888888876544
Q ss_pred ccccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCc
Q psy14257 720 KRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGE 772 (841)
Q Consensus 720 ~~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~ 772 (841)
....+.+....+.+||+.+.++.|.-+ ...++|.+.++...
T Consensus 356 ---------~v~~l~gH~~~V~~l~~spdg~~l~S~---s~D~tvriWdv~~~ 396 (420)
T 4gga_A 356 ---------KVAELKGHTSRVLSLTMSPDGATVASA---AADETLRLWRCFEL 396 (420)
T ss_dssp ---------EEEEECCCSSCEEEEEECTTSSCEEEE---ETTTEEEEECCSCS
T ss_pred ---------EEEEEcCCCCCEEEEEEcCCCCEEEEE---ecCCeEEEEECCCC
Confidence 223344556778999999888766655 24688999988543
No 377
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=91.40 E-value=16 Score=38.52 Aligned_cols=135 Identities=10% Similarity=0.061 Sum_probs=77.1
Q ss_pred cceEEEEecCCCcEEEEccC-CceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC
Q psy14257 412 GKNLYWVESNLDQIEVAKLS-GQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT 490 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~ 490 (841)
++.||+... .+.+..+++. |+..-.. .+..+.+++++ ++.||++.. .+.|+..+........... .
T Consensus 239 ~~~v~~~~~-~g~l~~~d~~tG~~~w~~---~~~~~~~~~~~--~~~l~~~~~---~g~l~~~d~~tG~~~w~~~-~--- 305 (376)
T 3q7m_A 239 NGVVFALAY-NGNLTALDLRSGQIMWKR---ELGSVNDFIVD--GNRIYLVDQ---NDRVMALTIDGGVTLWTQS-D--- 305 (376)
T ss_dssp TTEEEEECT-TSCEEEEETTTCCEEEEE---CCCCEEEEEEE--TTEEEEEET---TCCEEEEETTTCCEEEEEC-T---
T ss_pred CCEEEEEec-CcEEEEEECCCCcEEeec---cCCCCCCceEE--CCEEEEEcC---CCeEEEEECCCCcEEEeec-c---
Confidence 477887653 5678888874 5543222 23456677776 689999884 3688888875322222111 0
Q ss_pred CCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEe
Q psy14257 491 SRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 491 ~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~ 565 (841)
........+++. +++||+.+. .+.|+.+++. |+.+.........+ .....+.++.||+... .+.|+.++
T Consensus 306 ~~~~~~~~~~~~--~~~l~v~~~-~g~l~~~d~~tG~~~~~~~~~~~~~--~~~~~~~~~~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 306 LLHRLLTSPVLY--NGNLVVGDS-EGYLHWINVEDGRFVAQQKVDSSGF--QTEPVAADGKLLIQAK-DGTVYSIT 375 (376)
T ss_dssp TTTSCCCCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCTTCB--CSCCEEETTEEEEEBT-TSCEEEEE
T ss_pred cCCCcccCCEEE--CCEEEEEeC-CCeEEEEECCCCcEEEEEecCCCcc--eeCCEEECCEEEEEeC-CCEEEEEe
Confidence 011122334443 689998875 5789999965 44433332211111 1233457899999875 35666554
No 378
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=91.21 E-value=0.13 Score=38.40 Aligned_cols=28 Identities=18% Similarity=0.478 Sum_probs=22.6
Q ss_pred CCCC--Ccc--cCCCCcEEecCCCceecCCCCcccc
Q psy14257 140 DCHH--DCY--NTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 140 ~C~~--~C~--~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
+|.+ .|. +..++|.|.|++||. |..|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 6754 788 889999999999996 667754
No 379
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=91.18 E-value=17 Score=41.37 Aligned_cols=31 Identities=13% Similarity=0.163 Sum_probs=22.5
Q ss_pred eEEEEccCCEEEEEeCC---------------CCeEEEEEecCCcc
Q psy14257 353 SLVIDYNQDILYWCDSH---------------LNTVESVRVDGSER 383 (841)
Q Consensus 353 glavD~~~~~lYwaD~~---------------~~~I~~~~ldG~~~ 383 (841)
.+++|.+.+.|||...+ .+.|..++++....
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~ 284 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMA 284 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcE
Confidence 48999999999998642 13588888765443
No 380
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=91.16 E-value=17 Score=38.22 Aligned_cols=266 Identities=9% Similarity=0.008 Sum_probs=139.3
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC-------CcEEEEE
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE-------HRSVIVR 485 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~-------~~~~i~~ 485 (841)
+.+.++-...+.|.+.+.........+.........+++.|...+|.... . .+.|...++... ....+..
T Consensus 76 ~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~-~--d~~i~v~~~~~~~~~~~~~~~~~~~~ 152 (354)
T 2pbi_B 76 KRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG-L--DNKCSVYPLTFDKNENMAAKKKSVAM 152 (354)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES-T--TSEEEEEECCCCTTCCSGGGCEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee-C--CCCEEEEEEeccccccccccceeeec
Confidence 44455555667788877654333222333345678999999755554433 3 344444444211 1222222
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe---cCeEEEEeCCCCeEE
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF---ENHVYWTDWRTNSVI 562 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~---~~~lY~td~~~~~i~ 562 (841)
.-.....+++.+.+..|+-+. ..+.|...++........+..+ -.....+++. .+.++++-...+.|.
T Consensus 153 ------h~~~v~~~~~~~~~~~l~t~s-~D~~v~lwd~~~~~~~~~~~~h--~~~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 153 ------HTNYLSACSFTNSDMQILTAS-GDGTCALWDVESGQLLQSFHGH--GADVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp ------CSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEECC--SSCEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred ------cCCcEEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEcCC--CCCeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 233456788887666666444 4678888888654333333222 1223455552 245666656667888
Q ss_pred EEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEe-
Q psy14257 563 RANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIF- 641 (841)
Q Consensus 563 ~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~- 641 (841)
..+..+++....+...... .. ..+..|++ .+|+.
T Consensus 224 ~wd~~~~~~~~~~~~h~~~--------------------v~----------~v~~~p~~---------------~~l~s~ 258 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHESD--------------------VN----------SVRYYPSG---------------DAFASG 258 (354)
T ss_dssp EEETTTCCEEEEECCCSSC--------------------EE----------EEEECTTS---------------SEEEEE
T ss_pred EEECCCCcEEEEecCCCCC--------------------eE----------EEEEeCCC---------------CEEEEE
Confidence 7777666544332211000 00 01111222 11222
Q ss_pred ecCCeEEEEecCCCCccccceeecC-CCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccc
Q psy14257 642 SRPREIRGVDLEHPYYHTIPTISIP-QVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSK 720 (841)
Q Consensus 642 ~~~~~i~~~~l~~~~~~~~~~~~~~-~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~ 720 (841)
+....|+..++..... ....... ....+..++|.+....|+... ..++|+..++....
T Consensus 259 s~D~~v~lwd~~~~~~--~~~~~~~~~~~~~~~~~~s~~g~~l~~g~-~d~~i~vwd~~~~~------------------ 317 (354)
T 2pbi_B 259 SDDATCRLYDLRADRE--VAIYSKESIIFGASSVDFSLSGRLLFAGY-NDYTINVWDVLKGS------------------ 317 (354)
T ss_dssp ETTSCEEEEETTTTEE--EEEECCTTCCSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCS------------------
T ss_pred eCCCeEEEEECCCCcE--EEEEcCCCcccceeEEEEeCCCCEEEEEE-CCCcEEEEECCCCc------------------
Confidence 2334555555543211 1111111 113457899998888777665 57889888875433
Q ss_pred cccccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEE
Q psy14257 721 RSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVC 767 (841)
Q Consensus 721 ~~~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~ 767 (841)
....+......+..|++.+.++.|.-.. ..++|.+.
T Consensus 318 --------~~~~l~~h~~~v~~l~~spdg~~l~sgs---~D~~v~vW 353 (354)
T 2pbi_B 318 --------RVSILFGHENRVSTLRVSPDGTAFCSGS---WDHTLRVW 353 (354)
T ss_dssp --------EEEEECCCSSCEEEEEECTTSSCEEEEE---TTSEEEEE
T ss_pred --------eEEEEECCCCcEEEEEECCCCCEEEEEc---CCCCEEec
Confidence 2223444556788999998887666552 35667664
No 381
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=90.80 E-value=0.15 Score=36.55 Aligned_cols=27 Identities=15% Similarity=0.375 Sum_probs=21.4
Q ss_pred CCCC--Ccc--cCCCCcEEecCCCceecCCCCccc
Q psy14257 140 DCHH--DCY--NTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 140 ~C~~--~C~--~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
+|.+ .|. +..++|+|.|++||. |..|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 5653 687 788999999999996 66675
No 382
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.69 E-value=5.3 Score=39.34 Aligned_cols=96 Identities=14% Similarity=0.041 Sum_probs=64.5
Q ss_pred ceEEEEecCCCcEEEEcc-CCc------eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC-------C
Q psy14257 413 KNLYWVESNLDQIEVAKL-SGQ------FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG-------E 478 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~-~G~------~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG-------~ 478 (841)
-.||..+.. ++++-.+ ++. ..+.+...++.+...||++| +|.||... ++.+++.+... .
T Consensus 5 ~~l~~v~~d--~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P-~G~LYaV~----~G~Ly~~~~~t~~~~~W~~ 77 (236)
T 1tl2_A 5 SMLRGVYQD--KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSP-GGELYGVL----NDKIYKGTPPTHDNDNWMG 77 (236)
T ss_dssp CCEEEEETT--EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECT-TSCEEEEE----TTEEEEESCCCSTTCCHHH
T ss_pred eEEEEEeCC--cEEecCCCCCcccchhhhccccCccccccceeEEECC-CccEEEEe----CCeEEEECCCCCCcccccc
Confidence 356666653 6666554 333 12344444577888999999 79999993 57899999732 1
Q ss_pred CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 479 HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 479 ~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
..+.|.. .....-..+.+| .++.||.+ . .+.|++.+.
T Consensus 78 s~t~IG~-----~Gw~~F~a~~fD-~~G~LYav-~-dG~iyr~~p 114 (236)
T 1tl2_A 78 RAKKIGN-----GGWNQFQFLFFD-PNGYLYAV-S-KDKLYKASP 114 (236)
T ss_dssp HCEEEEC-----SCGGGCSEEEEC-TTSCEEEE-E-TTEEEEESC
T ss_pred cccEecc-----cccccceEEEEC-CCCCEEEe-C-CCEEEEeCC
Confidence 2344443 233345789999 57999998 3 489999987
No 383
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=90.45 E-value=22 Score=38.49 Aligned_cols=243 Identities=7% Similarity=0.006 Sum_probs=119.8
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe---cCeEEEEeCCCCeEEEEeccCCc
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF---ENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~---~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
.....+++.+. +.| ++-...+.|...+++.......+..+ ......+++. ++.+.++-...+.|...+..++.
T Consensus 163 ~~V~~l~~~~~-~~l-~s~s~dg~i~vwd~~~~~~~~~~~~h--~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 163 GGVWALKYAHG-GIL-VSGSTDRTVRVWDIKKGCCTHVFEGH--NSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKES 238 (464)
T ss_dssp SCEEEEEECST-TEE-EEEETTSCEEEEETTTTEEEEEECCC--SSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCC
T ss_pred cCEEEEEEcCC-CEE-EEEeCCCCEEEEECCCCcEEEEECCC--CCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCc
Confidence 44567777643 444 44445678888888765444343322 2234566664 34556665566777766655444
Q ss_pred ceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCcccccCceeEEee-cCCeEEE
Q psy14257 571 DVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFS-RPREIRG 649 (841)
Q Consensus 571 ~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~~~~~~~l~~~-~~~~i~~ 649 (841)
...........+..+ ..|.. ++ .++....+ ......+......+|+.+ ....|+.
T Consensus 239 ~~~~~~~~~~~~~~~-~~~~~-~~----------~~~~~~~~------------~~~~v~~~~~~~~~l~~~~~d~~i~v 294 (464)
T 3v7d_B 239 SVPDHGEEHDYPLVF-HTPEE-NP----------YFVGVLRG------------HMASVRTVSGHGNIVVSGSYDNTLIV 294 (464)
T ss_dssp CC------CCSSEEE-SCGGG-CT----------TEEEEECC------------CSSCEEEEEEETTEEEEEETTSCEEE
T ss_pred ccccccccCCcceEe-eccCC-Ce----------EEEEEccC------------ccceEEEEcCCCCEEEEEeCCCeEEE
Confidence 332211111111000 00100 00 00000000 000111111222334443 3556777
Q ss_pred EecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceE
Q psy14257 650 VDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQI 729 (841)
Q Consensus 650 ~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (841)
.++..... ...+ ......+..++|++..+.++... ..+.|+..++.... .
T Consensus 295 wd~~~~~~--~~~~-~~~~~~v~~~~~~~~~~~l~sg~-~dg~i~vwd~~~~~--------------------------~ 344 (464)
T 3v7d_B 295 WDVAQMKC--LYIL-SGHTDRIYSTIYDHERKRCISAS-MDTTIRIWDLENGE--------------------------L 344 (464)
T ss_dssp EETTTTEE--EEEE-CCCSSCEEEEEEETTTTEEEEEE-TTSCEEEEETTTTE--------------------------E
T ss_pred EECCCCcE--EEEe-cCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCc--------------------------E
Confidence 77653321 1111 11234578999999888877665 67889998886544 2
Q ss_pred EEEeeCCCCCcceeEEeecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEE
Q psy14257 730 QLVVDAGISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWS 806 (841)
Q Consensus 730 ~~i~~~~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~ 806 (841)
...+......+..|+++ ++.|+.. ...++|.+.++....+...... -.....+++.|...+|.-.
T Consensus 345 ~~~~~~h~~~v~~~~~~--~~~l~s~---s~dg~v~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~ 409 (464)
T 3v7d_B 345 MYTLQGHTALVGLLRLS--DKFLVSA---AADGSIRGWDANDYSRKFSYHH-------TNLSAITTFYVSDNILVSG 409 (464)
T ss_dssp EEEECCCSSCEEEEEEC--SSEEEEE---ETTSEEEEEETTTCCEEEEEEC-------TTCCCEEEEEECSSEEEEE
T ss_pred EEEEeCCCCcEEEEEEc--CCEEEEE---eCCCcEEEEECCCCceeeeecC-------CCCccEEEEEeCCCEEEEe
Confidence 22333445566777776 4555554 3568899999987655444433 2344455666654444433
No 384
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.42 E-value=33 Score=40.46 Aligned_cols=399 Identities=10% Similarity=-0.001 Sum_probs=183.2
Q ss_pred CCEEEEccCCCccccccccC---c--CCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeee----eecCCCcc
Q psy14257 328 GGIEKAGMHGENRSPLVTKN---I--QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLE----VLGSDSRV 398 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~---~--~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~----~~~~~~~~ 398 (841)
+.|.+.+......+.+.... + .....|+.|. .+.||+... .+.|.+++......+.+.... .+......
T Consensus 137 ~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lwigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 214 (781)
T 3v9f_A 137 RGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAE-DGKLYIGHV-EGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVR 214 (781)
T ss_dssp SCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEE-TTEEEEEET-TTEEEEEETTTTEEEEECC--------CCSSEE
T ss_pred CCeeEEECCCCeEEeeccCcccCCCccceEEEEECC-CCCEEEEec-CCCeEEEcCCCCceEeeecCCCCcccCCCCcee
Confidence 36777776544333332111 1 1234566664 567776543 335778776655433321100 00000000
Q ss_pred ccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecC-------CCCCceeEEEcCCCCeEEEEecCCCCCeEE
Q psy14257 399 GIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAG-------DMESPRAIALDPRFGLLFWTDWDSKAPRIE 471 (841)
Q Consensus 399 ~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~-------~l~~P~giavd~~~g~Ly~td~~~~~~~I~ 471 (841)
.+ ..| ..++|++... . .+.+++........+... .-...+.|+.|. .|.|++...+ ..|.
T Consensus 215 ~i------~~d-~~g~lwigt~-~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~---~Gl~ 281 (781)
T 3v9f_A 215 CI------YKD-TNGNIWIGTS-K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLK-DNKLWIATEL---NGIM 281 (781)
T ss_dssp EE------EEC-TTCCEEEEET-T-EEEEEETTTTEEEC-----------CCCCEEEEEECT-TSEEEEEESS---SCEE
T ss_pred EE------EEc-CCCCEEEEeC-C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECC-CCCEEEEeCC---CCeE
Confidence 00 011 1255665543 2 567777654333222111 123567888886 4888877642 4688
Q ss_pred EecCCCCCcEEEEE-------ecccCCCC--CCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcC-----CCC
Q psy14257 472 RCSMSGEHRSVIVR-------VDLLTSRG--AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSN-----HDS 537 (841)
Q Consensus 472 r~~ldG~~~~~i~~-------~~~~~~~~--~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~-----~~~ 537 (841)
+.+........+.. .......+ .....|..|. ++.|++.. ..+.|..++......+.+... ...
T Consensus 282 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~ 359 (781)
T 3v9f_A 282 ILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNNIWIGT-WGGGINFISNAPPTFHTWSYSPTQMNESS 359 (781)
T ss_dssp EEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCCEEEEE-BSSCEEEECSSCCSCEEEC----CCCSSC
T ss_pred EECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCCEEEEe-cCCeEEEeCCCCCcceeeccCccccccCC
Confidence 88876544332221 00000111 2346788884 56666554 346688888776544444211 111
Q ss_pred CC--cceEEEEec-CeEEEEeCCCCeEEEEeccCCcceEEEecccCCCceeccCCcccCCCCCCCCCCccccccCCCCce
Q psy14257 538 LT--HPFAIALFE-NHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTY 614 (841)
Q Consensus 538 l~--~P~gla~~~-~~lY~td~~~~~i~~~~~~~g~~~~~i~~~~~~p~~~h~qp~~~n~C~~~ng~Cs~lC~~~~~~~~ 614 (841)
+. ...+|+.+. +.||+... .+.|.++++.++. .+.+. . +. .. +....
T Consensus 360 l~~~~v~~i~~d~~g~lWigt~-~~Gl~~~~~~~~~-~~~~~----~-------~~-----~~------------~~~~v 409 (781)
T 3v9f_A 360 LSNKVVSSVCDDGQGKLWIGTD-GGGINVFENGKRV-AIYNK----E-------NR-----EL------------LSNSV 409 (781)
T ss_dssp CSSSCEEEEEECTTSCEEEEEB-SSCEEEEETTEEE-EECC---------------------C------------CCSBE
T ss_pred CCCcceEEEEEcCCCCEEEEeC-CCcEEEEECCCCe-EEEcc----C-------CC-----CC------------CCcce
Confidence 22 345666654 77887753 3457777754321 11000 0 00 00 00111
Q ss_pred eeeCCCCceeecCCCcccccCceeEEeec-CCeEEEEecCCCCccccceeecCCCCCceEEEEecCCCEEEEEECCCCeE
Q psy14257 615 KCQCPHVMKLMSDNKTCQVADSQFIIFSR-PREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEV 693 (841)
Q Consensus 615 ~C~Cp~g~~l~~d~~tC~~~~~~~l~~~~-~~~i~~~~l~~~~~~~~~~~~~~~~~~~~~v~~d~~~~~iyw~d~~~~~I 693 (841)
.+ +..| ....|.+++ ...+..++........... +......+.+|..|. .+.||+... +-|
T Consensus 410 ~~-------i~~d-------~~g~lWigt~~~Gl~~~~~~~~~~~~~~~-~~~~~~~v~~i~~d~-~g~lwigt~--~Gl 471 (781)
T 3v9f_A 410 LC-------SLKD-------SEGNLWFGTYLGNISYYNTRLKKFQIIEL-EKNELLDVRVFYEDK-NKKIWIGTH--AGV 471 (781)
T ss_dssp EE-------EEEC-------TTSCEEEEETTEEEEEECSSSCEEEECCS-TTTCCCCEEEEEECT-TSEEEEEET--TEE
T ss_pred EE-------EEEC-------CCCCEEEEeccCCEEEEcCCCCcEEEecc-CCCCCCeEEEEEECC-CCCEEEEEC--Cce
Confidence 11 1111 111233343 3556665543221111100 001124567888884 567776653 678
Q ss_pred EEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeC-----CCCCcceeEEeecCCcEEEEecCCCCCeEEEEe
Q psy14257 694 KRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDA-----GISHPSGLAIDWIAQNMFIAVSSPTQSKIVVCN 768 (841)
Q Consensus 694 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~~p~glAvD~~~~~LYw~~~~~~~~~I~v~~ 768 (841)
++.+..+...+ .+... ....+.+|+.|..+ +|++.. ..+-|.+.+
T Consensus 472 ~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~i~~i~~d~~g-~lWigt---~~~Gl~~~~ 521 (781)
T 3v9f_A 472 FVIDLASKKVI--------------------------HHYDTSNSQLLENFVRSIAQDSEG-RFWIGT---FGGGVGIYT 521 (781)
T ss_dssp EEEESSSSSCC--------------------------EEECTTTSSCSCSCEEEEEECTTC-CEEEEE---SSSCEEEEC
T ss_pred EEEeCCCCeEE--------------------------ecccCcccccccceeEEEEEcCCC-CEEEEE---cCCCEEEEe
Confidence 88887664411 11110 12457889999654 566652 224577777
Q ss_pred cCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCceEEE
Q psy14257 769 LEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKRETV 828 (841)
Q Consensus 769 l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~~~l 828 (841)
.++...+.+.... .. .-....+|+.|+. |.|+.... . +-|.+.+.....-+.+
T Consensus 522 ~~~~~~~~~~~~~--~l-~~~~i~~i~~d~~-g~lWi~T~-~--Glv~~~d~~~~~~~~~ 574 (781)
T 3v9f_A 522 PDMQLVRKFNQYE--GF-CSNTINQIYRSSK-GQMWLATG-E--GLVCFPSARNFDYQVF 574 (781)
T ss_dssp TTCCEEEEECTTT--TC-SCSCEEEEEECTT-SCEEEEET-T--EEEEESCTTTCCCEEE
T ss_pred CCCCeEEEccCCC--CC-CCCeeEEEEECCC-CCEEEEEC-C--CceEEECCCCCcEEEc
Confidence 6654333332210 00 0245788888864 66666554 2 1226665554443333
No 385
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=90.41 E-value=0.17 Score=34.79 Aligned_cols=30 Identities=37% Similarity=0.800 Sum_probs=22.8
Q ss_pred cccccCCCCCccC--ceeecCCCCceEEeecCCee
Q psy14257 171 YLHPCEAWGTCSQ--DCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 171 ~~~eC~~~~~Cs~--~C~~~~~~g~~~C~C~~G~~ 203 (841)
++++|. ..+|.+ .|.+. .++|+|.|++||.
T Consensus 2 d~d~C~-~~pC~ngg~C~~~--~~~~~C~C~~G~~ 33 (39)
T 1edm_B 2 DGDQCE-SNPCLNGGSCKDD--INSYECWCPFGFE 33 (39)
T ss_dssp CCCTTT-TCCCCTTCEEEEE--TTEEEEECCTTCC
T ss_pred ccccCC-CCCCCCCCEeEcC--CCceEeECCCCCc
Confidence 456674 346653 78888 8999999999996
No 386
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=90.36 E-value=31 Score=40.02 Aligned_cols=76 Identities=8% Similarity=-0.038 Sum_probs=46.9
Q ss_pred eeEEEeccCCEEEEEeC-----------------------------------CCCeEEEEEcCCCee-EEEEcCCCCCCc
Q psy14257 497 NGLTLDYQLTRIYWIDA-----------------------------------KSDSIHTVTYDGKDH-HVVLSNHDSLTH 540 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~-----------------------------------~~~~I~~~~~dG~~~-~~i~~~~~~l~~ 540 (841)
.++++|+.++.+|+... ..+.|..+|+..... -.+..... ..
T Consensus 384 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~--~~ 461 (668)
T 1kv9_A 384 HSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH--WN 461 (668)
T ss_dssp SCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS--CC
T ss_pred CcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC--Cc
Confidence 45899999999997321 115688888754433 22221110 11
Q ss_pred ceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 541 PFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 541 P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
--.++..++.||+.+ ..+.|+.++..+|+.+-.+
T Consensus 462 ~~~~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 462 GGTLSTAGNLVFQGT-AAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp CCEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred CceeEeCCCEEEEEC-CcccchhhhhhcChhheEe
Confidence 123555778899884 5678888898888765443
No 387
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=90.29 E-value=0.75 Score=52.62 Aligned_cols=67 Identities=10% Similarity=0.082 Sum_probs=43.0
Q ss_pred CCCCceeEEEcCCCCeEEEEecCC----------CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEE
Q psy14257 442 DMESPRAIALDPRFGLLFWTDWDS----------KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWI 511 (841)
Q Consensus 442 ~l~~P~giavd~~~g~Ly~td~~~----------~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~ 511 (841)
.+..|-.|+||+. |.||+.+=+. .+..++....+-...+.+... ..-...+|+++.++.+.||+.
T Consensus 474 ~f~~PDNL~fd~~-G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~----P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGLGFDKA-GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG----PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECTT-CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC----CTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCcceEECCC-CCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC----CCCccCcCeeECCCCCEEEEE
Confidence 4778999999986 6677764321 134566666653333333331 234567899999888888876
Q ss_pred eC
Q psy14257 512 DA 513 (841)
Q Consensus 512 d~ 513 (841)
-.
T Consensus 549 iQ 550 (592)
T 3zwu_A 549 IQ 550 (592)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 388
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=90.04 E-value=19 Score=37.10 Aligned_cols=131 Identities=8% Similarity=-0.044 Sum_probs=73.7
Q ss_pred EecCCCCCceeEEEcCC----CCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCCCCCCceeEEEeccC---CEEE
Q psy14257 438 LIAGDMESPRAIALDPR----FGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNGLTLDYQL---TRIY 509 (841)
Q Consensus 438 l~~~~l~~P~giavd~~----~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~glalD~~~---~~LY 509 (841)
+.........+|+++|. ...++.+... ..|...++. +.....+.... ....-.....+++.+.. ++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~---~~v~vw~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGS---NRVTLYECHSQGEIRLLQSYV-DADADENFYTCAWTYDSNTSHPLL 88 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEET---TEEEEEEECGGGCEEEEEEEE-CSCTTCCEEEEEEEECTTTCCEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCC---CEEEEEEcCCCcEEEeeeecc-ccCCCCcEEEEEeccCCCCCCCEE
Confidence 34344456789999983 4455555543 466666665 33333333210 00122345778887653 3555
Q ss_pred EEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe--cCeEEEEeCCCCeEEEEeccCCcceEE
Q psy14257 510 WIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF--ENHVYWTDWRTNSVIRANKWNGSDVTL 574 (841)
Q Consensus 510 w~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~--~~~lY~td~~~~~i~~~~~~~g~~~~~ 574 (841)
++-...+.|...++........+..+ -.....|++. ++.++++-...+.|...+..+++....
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVGH--GNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEESC--CSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEecCCCEEEEEEchhceEeeeecCC--CCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEE
Confidence 55556788999998754433333322 2345677774 456666656677788777766654443
No 389
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.83 E-value=31 Score=39.19 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=47.4
Q ss_pred eeEEEeccCCEEEEEeC------------------------------------CCCeEEEEEcC-CCeeEEEEcCCCCCC
Q psy14257 497 NGLTLDYQLTRIYWIDA------------------------------------KSDSIHTVTYD-GKDHHVVLSNHDSLT 539 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~------------------------------------~~~~I~~~~~d-G~~~~~i~~~~~~l~ 539 (841)
.++++|+.+++||+... ..+.|..+|+. |+.+-.+........
T Consensus 389 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~ 468 (571)
T 2ad6_A 389 GVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG 468 (571)
T ss_dssp CBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS
T ss_pred CCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc
Confidence 46899999999998642 23578888875 444433322211111
Q ss_pred cceEEEEecCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 540 HPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 540 ~P~gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
..++..++.||+.. ..+.|+.++..+|+.+-.+
T Consensus 469 --~~~~t~gg~v~~g~-~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 469 --GTLYTKGGLVWYAT-LDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp --BCEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred --eeEEECCCEEEEEc-CCCeEEEEECCCCCEEEEE
Confidence 12344578888864 4578888898888765433
No 390
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=89.77 E-value=21 Score=37.17 Aligned_cols=290 Identities=14% Similarity=0.039 Sum_probs=140.5
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeC-CCCCccceEEeeecCceeEEEeeecCCCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQT-GLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~-~l~~p~giavD~~~~~~y~~~td~~~~~~~~~~~~ 329 (841)
+.+++|.+. +. +..+-..++.|...++.++.. .....+.. .......+++.+.++ |++-. ..++.
T Consensus 19 v~~l~~sp~-g~--~las~~~D~~i~iw~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~g~--~l~s~--------s~D~~ 84 (345)
T 3fm0_A 19 CWFLAWNPA-GT--LLASCGGDRRIRIWGTEGDSW-ICKSVLSEGHQRTVRKVAWSPCGN--YLASA--------SFDAT 84 (345)
T ss_dssp EEEEEECTT-SS--CEEEEETTSCEEEEEEETTEE-EEEEEECSSCSSCEEEEEECTTSS--EEEEE--------ETTSC
T ss_pred EEEEEECCC-CC--EEEEEcCCCeEEEEEcCCCcc-eeeeeeccccCCcEEEEEECCCCC--EEEEE--------ECCCc
Confidence 456777665 33 455556677777777765431 01122222 223455667665442 33211 23456
Q ss_pred EEEEccCCCccccc--cccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEE-EEeeeeecCCCccccCCCCCC
Q psy14257 330 IEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTV-SFNLEVLGSDSRVGIPNCRPE 406 (841)
Q Consensus 330 I~~~~~dG~~~~~l--~~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~-~~~~~~~~~~~~~~i~~~~~~ 406 (841)
|..++.+......+ ....-.....|++.+.++.|.-+ ...+.|...+++...... +..... ....+ .
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~-s~D~~v~iwd~~~~~~~~~~~~~~~--h~~~v-------~ 154 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATC-SRDKSVWVWEVDEEDEYECVSVLNS--HTQDV-------K 154 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEEECTTSCEEEEEEECC--CCSCE-------E
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEE-ECCCeEEEEECCCCCCeEEEEEecC--cCCCe-------E
Confidence 66666544322211 12233445788888876655544 456778888886543322 211110 00000 0
Q ss_pred ccccc-cceEEEEecCCCcEEEEccCCceEE--EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc---
Q psy14257 407 DNLWI-GKNLYWVESNLDQIEVAKLSGQFRR--TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR--- 480 (841)
Q Consensus 407 avdw~-~~~LY~tD~~~~~I~v~~~~G~~~~--~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~--- 480 (841)
.+.|. .+.+..+-...+.|.+.++...... ..+.........|+++|...+|...... ..-+|++....+...
T Consensus 155 ~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D-~~v~iW~~~~~~~~~~~~ 233 (345)
T 3fm0_A 155 HVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD-RTVRIWRQYLPGNEQGVA 233 (345)
T ss_dssp EEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEEEECTTCTTCCC
T ss_pred EEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCC-CeEEEeccccCCCCccce
Confidence 12221 1445555556678888877654321 2233344567899999986666555433 245666654433221
Q ss_pred --------EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe------eEEEEc-CCCCCCcceEEE
Q psy14257 481 --------SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD------HHVVLS-NHDSLTHPFAIA 545 (841)
Q Consensus 481 --------~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~------~~~i~~-~~~~l~~P~gla 545 (841)
..+... ....-.....+++.+.++.|..+. ..+.|...+.+... ...... .......-..|+
T Consensus 234 ~~~~~~~~~~~~~~--~~~h~~~v~~v~~~~~~~~l~s~~-~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 234 CSGSDPSWKCICTL--SGFHSRTIYDIAWCQLTGALATAC-GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp CC---CEEEEEEEE--CSSCSSCEEEEEECTTTCCEEEEE-TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred eeccCCccceeEEe--cCCCCCcEEEEEEecCCCEEEEEe-CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 111110 001123346777876666555443 45667777665421 011110 000112235566
Q ss_pred Eec-C-eEEEEeCCCCeEEEEeccC
Q psy14257 546 LFE-N-HVYWTDWRTNSVIRANKWN 568 (841)
Q Consensus 546 ~~~-~-~lY~td~~~~~i~~~~~~~ 568 (841)
+.. + .++.+-...+.|...+..+
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCceEEEEcCCCCcEEEEEecC
Confidence 642 2 4666655566666555433
No 391
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=89.42 E-value=0.31 Score=41.23 Aligned_cols=66 Identities=20% Similarity=0.346 Sum_probs=49.0
Q ss_pred Cccc-CCCCcEEecCCCceecCCCCccccccc-cC-CCCCccC--ceeecCCC-CceEEeecCCeeec-CCCCceEe
Q psy14257 144 DCYN-TPEGFMCVCPRDMYLQPDLITCSYLHP-CE-AWGTCSQ--DCEPSVSN-NSYKCTCHAGYELE-PDMFTCKS 213 (841)
Q Consensus 144 ~C~~-~~g~~~C~C~~Gy~l~~d~~~C~~~~e-C~-~~~~Cs~--~C~~~~~~-g~~~C~C~~G~~l~-~d~~~C~~ 213 (841)
.|.. .+|...|.|..||.. |+..|...++ |. .++.|.. .|..+ . ..-.|.|.++|... -++..|..
T Consensus 23 ~C~r~~~G~e~CrCl~gY~~--dg~~Cv~~Np~C~~nNGGCd~nAeC~~~--~~~ki~C~C~~~~~~~~~~GvfC~~ 95 (105)
T 1n1i_A 23 ACYRYLDGTEEWRCLLGFKE--VGGKCVPASITCEENNGGCAPEAECTMD--DKKEVECKCTKEGSEPLFEGVFCSS 95 (105)
T ss_dssp EEEECTTSCEEEEECTTEEE--CSSSEEECCCCTTSGGGGSCTTSEEEEC--TTSCEEEECCSTTCCEEGGGTEECC
T ss_pred CeEECCCCCEeEEEECCeec--cCCEEEECCcchhhcCCCcCCCcEeEEC--CCCEEEeECCCCCCccccceEEECC
Confidence 5666 678899999999985 7889998888 75 5678854 78776 4 67899999986422 24455544
No 392
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=89.38 E-value=36 Score=39.37 Aligned_cols=150 Identities=9% Similarity=0.024 Sum_probs=85.6
Q ss_pred cceEEEEecCCCcEEEEccCCc-----eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe
Q psy14257 412 GKNLYWVESNLDQIEVAKLSGQ-----FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV 486 (841)
Q Consensus 412 ~~~LY~tD~~~~~I~v~~~~G~-----~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~ 486 (841)
++++.++-+..+.|.+.++... .....+.........++++|...+|..... .+.|..-++..........
T Consensus 394 ~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~---Dg~v~vwd~~~~~~~~~~~- 469 (694)
T 3dm0_A 394 NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSW---DGELRLWDLAAGVSTRRFV- 469 (694)
T ss_dssp CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEET---TSEEEEEETTTTEEEEEEE-
T ss_pred CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeC---CCcEEEEECCCCcceeEEe-
Confidence 4567888777888988887532 112223334456789999998666655543 4667777765332222222
Q ss_pred cccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC-CCCcceEEEEecC---eEEEEeCCCCeEE
Q psy14257 487 DLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD-SLTHPFAIALFEN---HVYWTDWRTNSVI 562 (841)
Q Consensus 487 ~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~-~l~~P~gla~~~~---~lY~td~~~~~i~ 562 (841)
..-.....+++.+.+..|.- -...+.|...+..+.....+..... .......+++..+ .++++-...+.|.
T Consensus 470 ----~h~~~v~~~~~s~~~~~l~s-~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 470 ----GHTKDVLSVAFSLDNRQIVS-ASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp ----CCSSCEEEEEECTTSSCEEE-EETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred ----CCCCCEEEEEEeCCCCEEEE-EeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 23345678889876666654 4446788888887765555543211 0111244555322 3455545556666
Q ss_pred EEeccCCc
Q psy14257 563 RANKWNGS 570 (841)
Q Consensus 563 ~~~~~~g~ 570 (841)
..+..+++
T Consensus 545 vwd~~~~~ 552 (694)
T 3dm0_A 545 VWNLSNCK 552 (694)
T ss_dssp EEETTTCC
T ss_pred EEECCCCc
Confidence 66654443
No 393
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=89.20 E-value=0.03 Score=56.89 Aligned_cols=85 Identities=7% Similarity=-0.090 Sum_probs=57.1
Q ss_pred cccCCCCCeEecC--CCCCCCCCCCCCCCCCccc----ccccccCCCC-CCCcccCCCCcEEecCCCceecCCCCccccc
Q psy14257 100 FDCQDVLRTCIPK--ALVCDGEPACFNGEDEMFC----DEKQCLRSDC-HHDCYNTPEGFMCVCPRDMYLQPDLITCSYL 172 (841)
Q Consensus 100 ~~C~~~~~~Ci~~--~~~Cdg~~~C~~g~de~~C----~eC~~~~~~C-~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~ 172 (841)
..|.++ ++|+.. +|.| +|+.||....| +||.... .| +..|+| +.+| | .+..|+..
T Consensus 38 ~~c~ng-G~C~~g~~~y~C----~Cp~Gf~G~~Ce~ni~ec~~~~-~c~s~pC~n---ggtc-----~----~G~~c~~~ 99 (267)
T 4fbr_A 38 IKSDDG-GKTLKGTMTYNG----EGPIGFRGTLSSANNYTVENQW-GGTSAPWQP---GGVW-----V----LGARDKQN 99 (267)
T ss_dssp EECSST-TSEEEEEEEETT----SCCEEEEEEECSTTEEEEEEES-SSTTSCEEE---EEEE-----E----CCCCSSCC
T ss_pred CCcCCC-CeecCCCCCeEE----eCCCCccccccccccccccccc-CcCCCcccC---CCee-----e----ccCccccc
Confidence 367777 999887 8999 99999988777 5654322 23 234554 2233 1 35567766
Q ss_pred cccCCCCCccC--ceeecCCCCceEEeecCCeeec
Q psy14257 173 HPCEAWGTCSQ--DCEPSVSNNSYKCTCHAGYELE 205 (841)
Q Consensus 173 ~eC~~~~~Cs~--~C~~~~~~g~~~C~C~~G~~l~ 205 (841)
+||.. .+|.. .|++. ..+|+|.|+.||+..
T Consensus 100 ~eC~s-~pC~ngG~C~~~--~~sy~C~C~~Gf~G~ 131 (267)
T 4fbr_A 100 IVAVS-IKSNDGGKTLTG--TTTYNGEGPIGFKSE 131 (267)
T ss_dssp EEEEE-EECSSTTSEEEE--EEEETTSCCEEEEEE
T ss_pred cccCC-CCCCCCCEEecC--CccEEeeCCCCcccc
Confidence 77742 34532 77787 889999999999854
No 394
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=89.15 E-value=0.12 Score=48.67 Aligned_cols=33 Identities=24% Similarity=0.713 Sum_probs=26.6
Q ss_pred CCC--CCcccCCCCcEEecCCCceecCCCCccccccccC
Q psy14257 140 DCH--HDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 140 ~C~--~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
+|. ..|.++.++|.|.|++||. |..|+.+++|.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~ 160 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDD 160 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEE----STTSCEECC--
T ss_pred CCCCCCEEecCCCCceEeCCCCCc----CcccccCcccC
Confidence 453 3799999999999999997 67899998884
No 395
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=89.13 E-value=3.9 Score=46.67 Aligned_cols=135 Identities=13% Similarity=0.263 Sum_probs=78.5
Q ss_pred CCCCceEEEEecCCCEEEEEECC---------------------CCeEEEEEcccCceeeeeeeeeeeec---ccccccc
Q psy14257 667 QVFSPNNLNFDAANKKIYWTDQE---------------------YNEVKRSSIVGGQIQLVVDAVFEFYL---TPLSKRS 722 (841)
Q Consensus 667 ~~~~~~~v~~d~~~~~iyw~d~~---------------------~~~I~~~~~~g~~~~~~~~~~~~~~~---~~~~~~~ 722 (841)
.+..+..++++|.++.||++-+. .+.|+|+..++......- ---++|+ .|.....
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~-f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKT-FAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSE-EEEEEEEECCCTTTSTT
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccce-eEEEEEEeccCcccccc
Confidence 35678999999999999999642 256888887654311000 0000111 1111000
Q ss_pred cccCceEEEEeeCCCCCcceeEEeecCCcEEEEecCC-----------CCCeEEEEecC-CcceEEEEcCCCCCCCcCCC
Q psy14257 723 SIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVSSP-----------TQSKIVVCNLE-GEYQTTILSNESNDTSTLSK 790 (841)
Q Consensus 723 ~~~~~~~~~i~~~~~~~p~glAvD~~~~~LYw~~~~~-----------~~~~I~v~~l~-g~~~~~~~~~~~~~~~~l~~ 790 (841)
...+.....--...+..|-+|+||+.+ +||+.. |. .++.+-+.... |+.++.+..- .-..
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~~G-~LwI~e-Dg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P------~gaE 532 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAG-RLWILT-DGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP------IGCE 532 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTC-CEEEEE-CCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC------TTCE
T ss_pred cccccccccCCCCCccCCcceEECCCC-CEEEEe-cCCCcccccccccccceEEEEeCCCCeEEEEEeCC------CCcc
Confidence 000000000111357899999999876 577775 43 23456666654 5555544431 0368
Q ss_pred ceEEEEeCCCCeEEEEecCC
Q psy14257 791 ISSIAVWPVKGKMFWSNVTK 810 (841)
Q Consensus 791 p~~iavd~~~g~lyw~d~~~ 810 (841)
..|+++.|....||..-++-
T Consensus 533 ~TG~~fspDg~tlfvniQHP 552 (592)
T 3zwu_A 533 VTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EEEEEECTTSSEEEEEEEST
T ss_pred CcCeeECCCCCEEEEEEECC
Confidence 89999999999999998764
No 396
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=89.08 E-value=0.13 Score=62.73 Aligned_cols=26 Identities=42% Similarity=0.965 Sum_probs=23.9
Q ss_pred eeccCccCcCCcCCCCCCCCCCCCCCCC
Q psy14257 2 TCIIAYWKCDGDEDCKDGSDELAEHCQD 29 (841)
Q Consensus 2 ~Ci~~~~~Cdg~~dC~dgsde~~~~C~~ 29 (841)
+||+..|+|||+.||.|+|||. +|..
T Consensus 129 ~ci~~~~~c~g~~dC~d~sde~--~C~~ 154 (913)
T 3t5o_A 129 RCIARKLECNGENDCGDNSDER--DCGR 154 (913)
T ss_dssp CEEEGGGSSSSSCCSSSSGGGT--TCSS
T ss_pred ceEccceecCCcccCCCccccc--cCCC
Confidence 6999999999999999999998 7863
No 397
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.54 E-value=42 Score=39.00 Aligned_cols=55 Identities=7% Similarity=-0.086 Sum_probs=33.4
Q ss_pred CeEEEEEcCCCe-eEEEEcCCCCCCcceE--EEEecCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 516 DSIHTVTYDGKD-HHVVLSNHDSLTHPFA--IALFENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 516 ~~I~~~~~dG~~-~~~i~~~~~~l~~P~g--la~~~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
+.|..+|+.... +-.+.... .+.+ ++..++.+|+. ...+.++.++..+|+.+..+
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~----~~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVS----PWNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESS----SCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcEEeecCCCC----CCcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeee
Confidence 578888886433 32222211 1122 34456788887 45688888998888866544
No 398
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.41 E-value=23 Score=35.86 Aligned_cols=225 Identities=10% Similarity=0.011 Sum_probs=105.9
Q ss_pred CCCEEEEccCCCcccccc--ccCcCCCceEEEEcc-CCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCC
Q psy14257 327 DGGIEKAGMHGENRSPLV--TKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNC 403 (841)
Q Consensus 327 ~~~I~~~~~dG~~~~~l~--~~~~~~P~glavD~~-~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~ 403 (841)
++.|..+++++...+.+. ...-..-..|++.+. .+.++.+-...++|...++.......+.... .....
T Consensus 30 D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~--~h~~~------ 101 (297)
T 2pm7_B 30 DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHA--VHSAS------ 101 (297)
T ss_dssp TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEEC--CCSSC------
T ss_pred CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEee--cCCCc------
Confidence 456777776543222211 112223346666543 3455566667788888887654321111100 00000
Q ss_pred CCCcccccc---ceEEEEecCCCcEEEEccCCc--eEEEEecCCCCCceeEEEcCCC------------CeEEEEecCCC
Q psy14257 404 RPEDNLWIG---KNLYWVESNLDQIEVAKLSGQ--FRRTLIAGDMESPRAIALDPRF------------GLLFWTDWDSK 466 (841)
Q Consensus 404 ~~~avdw~~---~~LY~tD~~~~~I~v~~~~G~--~~~~l~~~~l~~P~giavd~~~------------g~Ly~td~~~~ 466 (841)
..++.|.. +.+..+-...+.|.+.++... .....+.........+++.|.. +.++.+-..
T Consensus 102 -v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-- 178 (297)
T 2pm7_B 102 -VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-- 178 (297)
T ss_dssp -EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET--
T ss_pred -eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC--
Confidence 01233321 455556666778888887643 1112233333456778888752 334454433
Q ss_pred CCeEEEecCCCCC-cE-EEEEecccCCCCCCceeEEEeccC--CEEEEEeCCCCeEEEEEcCCCe---eEEEEcCCCCCC
Q psy14257 467 APRIERCSMSGEH-RS-VIVRVDLLTSRGAWPNGLTLDYQL--TRIYWIDAKSDSIHTVTYDGKD---HHVVLSNHDSLT 539 (841)
Q Consensus 467 ~~~I~r~~ldG~~-~~-~i~~~~~~~~~~~~P~glalD~~~--~~LYw~d~~~~~I~~~~~dG~~---~~~i~~~~~~l~ 539 (841)
.+.|...+++... .. .+... ...-.....+++.+.. +.++.+-...+.|...+++... ...++.....-.
T Consensus 179 D~~v~lwd~~~~~~~~~~~~~l---~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~ 255 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVLESTL---EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPD 255 (297)
T ss_dssp TSCEEEEEEETTTTEEEEEEEE---CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSS
T ss_pred CCcEEEEEEcCCCceEEEEEEe---cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCC
Confidence 3444444443322 11 11111 0223456788888754 4666666566778888776532 222321111112
Q ss_pred cceEEEEe-cCeEEEEeCCCCeEEEEe
Q psy14257 540 HPFAIALF-ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 540 ~P~gla~~-~~~lY~td~~~~~i~~~~ 565 (841)
....+++. ++.++.+-...+.|...+
T Consensus 256 ~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 256 VLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp CEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 23556663 344444444445554443
No 399
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.10 E-value=31 Score=36.95 Aligned_cols=157 Identities=12% Similarity=0.054 Sum_probs=89.0
Q ss_pred ceEEEEecCCCcEEEEccCCc-eEEEEecC-CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQ-FRRTLIAG-DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT 490 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~-~~~~l~~~-~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~ 490 (841)
+.+.++-...+.|.+.++... ...++... .......|+++|...+|+.... .+.|...++.... .+.....
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~---dg~i~iwd~~~~~--~~~~~~~-- 254 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT---RGIIDIWDIRFNV--LIRSWSF-- 254 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET---TSCEEEEETTTTE--EEEEEBC--
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC---CCeEEEEEcCCcc--EEEEEec--
Confidence 556666666789999998654 44444321 3457889999998666655553 3566666665322 2221100
Q ss_pred CCCCCceeEEEec---cCCEEEEEeCCCCeEEEEEcCCCe-eEEEEcCCC-----------------------CCCcceE
Q psy14257 491 SRGAWPNGLTLDY---QLTRIYWIDAKSDSIHTVTYDGKD-HHVVLSNHD-----------------------SLTHPFA 543 (841)
Q Consensus 491 ~~~~~P~glalD~---~~~~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~~-----------------------~l~~P~g 543 (841)
..-.....+++.+ .+++++++-...+.|...++.... ...+..... .......
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence 1112234554443 235555566666788888887443 333332110 0011245
Q ss_pred EEEecCeEEEEeCCCCeEEEEeccCCcceEEEe
Q psy14257 544 IALFENHVYWTDWRTNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 544 la~~~~~lY~td~~~~~i~~~~~~~g~~~~~i~ 576 (841)
|++.++.++++-...+.|...+..+++....+.
T Consensus 335 l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 335 ISVSNDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp EEEETTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred EEECCceEEEecCCCCeEEEEECCCcccceEEe
Confidence 666667777777777888888877776665543
No 400
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=87.85 E-value=46 Score=38.65 Aligned_cols=57 Identities=12% Similarity=0.125 Sum_probs=33.7
Q ss_pred eeEEEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEecCeEEEEe
Q psy14257 497 NGLTLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALFENHVYWTD 555 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~~~~lY~td 555 (841)
.+.++...++.||+. ...+.+..++.. |..+..+.........|... -.+|+.|++-
T Consensus 480 ~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y-~~~G~~~v~~ 537 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGTGVVAAPSTY-MVDGRQYVSV 537 (677)
T ss_dssp CCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEEE
T ss_pred cCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCCCcccCCEEE-EeCCEEEEEE
Confidence 344455567888887 456889999875 56555554443333344322 1456777654
No 401
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=87.42 E-value=0.35 Score=56.20 Aligned_cols=84 Identities=24% Similarity=0.563 Sum_probs=52.9
Q ss_pred cccCCCCCeEecCCCCCCCCCCCC------CCCCCccc----ccccccC-CCCCC----CcccCCCCcEEecCCCceecC
Q psy14257 100 FDCQDVLRTCIPKALVCDGEPACF------NGEDEMFC----DEKQCLR-SDCHH----DCYNTPEGFMCVCPRDMYLQP 164 (841)
Q Consensus 100 ~~C~~~~~~Ci~~~~~Cdg~~~C~------~g~de~~C----~eC~~~~-~~C~~----~C~~~~g~~~C~C~~Gy~l~~ 164 (841)
..|.+. +.|+.. .| .|. .||.+..| .+|...+ ..|+. .|.+ ..|.|.+||.
T Consensus 482 ~~Cs~~-G~C~~G--~C----~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~--- 547 (687)
T 3k6s_B 482 IICSGL-GDCVCG--QC----LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE--- 547 (687)
T ss_dssp CGGGSS-EEEETT--EE----EECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET----TEEEECTTCC---
T ss_pred CcCCCC-CEEeCC--EE----EcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCc---
Confidence 358877 889843 56 888 88877777 3454321 24542 5653 3899999996
Q ss_pred CCCccc---cccccCC--CCCccC--ceeecCCCCceEEeecCCeee
Q psy14257 165 DLITCS---YLHPCEA--WGTCSQ--DCEPSVSNNSYKCTCHAGYEL 204 (841)
Q Consensus 165 d~~~C~---~~~eC~~--~~~Cs~--~C~~~~~~g~~~C~C~~G~~l 204 (841)
|..|+ +.++|.. ...|+. .|.. ++|.|.+||..
T Consensus 548 -G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~------g~C~C~~Gy~G 587 (687)
T 3k6s_B 548 -GSACQCERTTEGCLNPRRVECSGRGRCRC------NVCECHSGYQL 587 (687)
T ss_dssp -STTSCSCCSSCTTBCTTCSBTSSSCCBCS------SCBCCSTTCCT
T ss_pred -CCCCccCCCCCCCCCCCCCCCCCCCcCCC------CEEECCCCCcC
Confidence 66776 2456642 235643 3432 46999999863
No 402
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.94 E-value=31 Score=35.69 Aligned_cols=160 Identities=8% Similarity=0.005 Sum_probs=85.2
Q ss_pred CCceEEEEc--cCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc-cceEEEEecCCCcEE
Q psy14257 350 WPSSLVIDY--NQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIE 426 (841)
Q Consensus 350 ~P~glavD~--~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~ 426 (841)
....|++++ .++. +++-...+.|...++.......+..... ... ...+.|. .+.++.+-...+.|.
T Consensus 127 ~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~~~~---~~~-------i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHSAKS---DVE-------YSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp CEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEECCCS---SCC-------CCEEEECTTSCEEEEECTTSCEE
T ss_pred CEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEecCC---CCc-------eEEEEECCCCCEEEEEcCCCEEE
Confidence 345677776 4444 4444567788888887655433221110 000 0112221 256666666778999
Q ss_pred EEccCCceEE-EEecC-CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcE-EEEEecccCCCCCCceeEEEec
Q psy14257 427 VAKLSGQFRR-TLIAG-DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRS-VIVRVDLLTSRGAWPNGLTLDY 503 (841)
Q Consensus 427 v~~~~G~~~~-~l~~~-~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~-~i~~~~~~~~~~~~P~glalD~ 503 (841)
+.++...... ..+.. .......|+++|...+|..+. . . .|...++...... .+.........+.. ..+++++
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~--~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 270 (343)
T 3lrv_A 196 VYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-D--Q-TVVCFDLRKDVGTLAYPTYTIPEFKTGT-VTYDIDD 270 (343)
T ss_dssp EEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-S--S-BEEEEETTSSTTCBSSCCCBC-----CC-EEEEECT
T ss_pred EEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-C--C-eEEEEEcCCCCcceeecccccccccccc-eEEEECC
Confidence 9998654322 22332 345678999999866666655 3 2 6666666533221 11000000001111 3599998
Q ss_pred cCCEEEEEeCCCCeEEEEEcCC
Q psy14257 504 QLTRIYWIDAKSDSIHTVTYDG 525 (841)
Q Consensus 504 ~~~~LYw~d~~~~~I~~~~~dG 525 (841)
.+..|..+....+.|...+++.
T Consensus 271 ~g~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 271 SGKNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECT
T ss_pred CCCEEEEecCCCCcEEEEEEcc
Confidence 7777776555467788877754
No 403
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=86.90 E-value=0.47 Score=39.89 Aligned_cols=56 Identities=20% Similarity=0.496 Sum_probs=42.9
Q ss_pred Cccc-CCCCcEEecCCCceecCCCCccccc--cccC-CCCCccC--ceeecCCC-----CceEEeecCCee
Q psy14257 144 DCYN-TPEGFMCVCPRDMYLQPDLITCSYL--HPCE-AWGTCSQ--DCEPSVSN-----NSYKCTCHAGYE 203 (841)
Q Consensus 144 ~C~~-~~g~~~C~C~~Gy~l~~d~~~C~~~--~eC~-~~~~Cs~--~C~~~~~~-----g~~~C~C~~G~~ 203 (841)
.|.. .++...|.|..||.. |+..|... ..|. .++.|.. .|... . +...|.|.+||.
T Consensus 17 ~C~r~~~g~e~C~C~~gy~g--dg~~Cv~~~~~sC~~nNGGCd~nA~C~~~--~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYKQ--EGDKCVENPNPTCNENNGGCDADAKCTEE--DSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEECCTTSCCEEEECTTEEE--ETTEEEECSCCCSTTGGGGCCTTEEEECC--SCSSSSCCCEEEECSTTC
T ss_pred CeEEcCCCCEEEEecCCeec--CCCeEeeCCCCChhhcCCCcCCCceeEec--CCcccCCceEeEeCCCCc
Confidence 5666 468899999999985 78889877 5886 3477854 67765 3 568999999865
No 404
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.77 E-value=28 Score=35.02 Aligned_cols=73 Identities=7% Similarity=-0.085 Sum_probs=52.2
Q ss_pred CCceEEEEecCCCEEEEEEC-CCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEee
Q psy14257 669 FSPNNLNFDAANKKIYWTDQ-EYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDW 747 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw~d~-~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~ 747 (841)
..+..+.+.+..+.++.+.. ..++|+..++.... ....+.+..+.+.+||+.+
T Consensus 241 ~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--------------------------~~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 241 SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------------------------KVAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------------------------EEEEECCCSSCEEEEEECT
T ss_pred eeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--------------------------EEEEEcCCCCCEEEEEEcC
Confidence 45678889999999887753 56889888876544 2233445567789999998
Q ss_pred cCCcEEEEecCCCCCeEEEEecC
Q psy14257 748 IAQNMFIAVSSPTQSKIVVCNLE 770 (841)
Q Consensus 748 ~~~~LYw~~~~~~~~~I~v~~l~ 770 (841)
.++.|.-+ ...++|.+.++.
T Consensus 295 dg~~l~S~---s~D~~v~iWd~~ 314 (318)
T 4ggc_A 295 DGATVASA---AADETLRLWRCF 314 (318)
T ss_dssp TSSCEEEE---ETTTEEEEECCS
T ss_pred CCCEEEEE---ecCCeEEEEECC
Confidence 87766554 246788888764
No 405
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=86.60 E-value=34 Score=41.32 Aligned_cols=203 Identities=11% Similarity=0.006 Sum_probs=112.7
Q ss_pred CCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEc
Q psy14257 350 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAK 429 (841)
Q Consensus 350 ~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~ 429 (841)
....|+++++++.|.... ..+.|+..+..+........ .... ..++.|..+++.++-...+.|.+.+
T Consensus 19 ~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~~~~~~~~~-----~~~~-------V~~l~fspg~~L~S~s~D~~v~lWd 85 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQVEVVIKLE-----DRSA-------IKEMRFVKGIYLVVINAKDTVYVLS 85 (902)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSEEEEECSTTCEEEEECS-----SCCC-------EEEEEEETTTEEEEEETTCEEEEEE
T ss_pred CcEEEEECCCCCEEEEEe-CCCEEEEEeCCCcEEEEEcC-----CCCC-------EEEEEEcCCCEEEEEECcCeEEEEE
Confidence 356788888877665554 45778777766543222111 0000 0123333355444545568899988
Q ss_pred cCC-ceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEe------cccCCCCCCceeEEEe
Q psy14257 430 LSG-QFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRV------DLLTSRGAWPNGLTLD 502 (841)
Q Consensus 430 ~~G-~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~------~~~~~~~~~P~glalD 502 (841)
+.. +...++. .-.....++++|...+|+.... .+.|...++++.....+... ............|++.
T Consensus 86 ~~~~~~~~~~~--~~~~V~~v~~sp~g~~l~sgs~---dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~s 160 (902)
T 2oaj_A 86 LYSQKVLTTVF--VPGKITSIDTDASLDWMLIGLQ---NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWN 160 (902)
T ss_dssp TTTCSEEEEEE--CSSCEEEEECCTTCSEEEEEET---TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEE
T ss_pred CCCCcEEEEEc--CCCCEEEEEECCCCCEEEEEcC---CCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEc
Confidence 864 4444443 2246789999999888887764 46777777765433211110 0001223456789998
Q ss_pred ccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCC----------------CCCcceEEEEe-cCeEEEEeCCCCeEEEEe
Q psy14257 503 YQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHD----------------SLTHPFAIALF-ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 503 ~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~----------------~l~~P~gla~~-~~~lY~td~~~~~i~~~~ 565 (841)
+.++.++.+-...+.| ..++........+.... .-.....+++. ++.++.+-...+.|...+
T Consensus 161 p~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 161 PRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp TTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred cCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Confidence 7655555555556778 88887654433332210 00123566663 455566655666777666
Q ss_pred ccCCcc
Q psy14257 566 KWNGSD 571 (841)
Q Consensus 566 ~~~g~~ 571 (841)
..+|+.
T Consensus 240 ~~~g~~ 245 (902)
T 2oaj_A 240 ANSGHM 245 (902)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 655543
No 406
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=86.58 E-value=0.24 Score=38.04 Aligned_cols=33 Identities=27% Similarity=0.780 Sum_probs=25.1
Q ss_pred ccccccccCCCCCcc----CceeecCCCCceEEeecCCee
Q psy14257 168 TCSYLHPCEAWGTCS----QDCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 168 ~C~~~~eC~~~~~Cs----~~C~~~~~~g~~~C~C~~G~~ 203 (841)
.|.++++|. ..+|. ..|.++ .++|.|.|++||.
T Consensus 7 ~~~~~d~C~-snPC~nga~gtC~~~--~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 7 LSETPAACS-SNPCGPEAAGTCKET--NSGYICRCNQGYR 43 (61)
T ss_dssp CTTSCCHHH-HCSSCSSSCCEEEEC--SSEEEEECCTTEE
T ss_pred hcCCCCcCc-CCCCcCCCccccccC--CCceEeECCCCCc
Confidence 355667774 34564 368998 9999999999998
No 407
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.36 E-value=51 Score=37.64 Aligned_cols=18 Identities=22% Similarity=0.266 Sum_probs=15.0
Q ss_pred CceeEEEcCCCCeEEEEe
Q psy14257 445 SPRAIALDPRFGLLFWTD 462 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td 462 (841)
+..++|+||.++.+|+..
T Consensus 394 ~w~~~a~dp~~~~~yv~~ 411 (599)
T 1w6s_A 394 NQGHDSYDPKRELFFMGI 411 (599)
T ss_dssp CSCBCEEETTTTEEEEEE
T ss_pred CCCCccCCCCCCEEEEec
Confidence 446789999999999975
No 408
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=85.99 E-value=0.31 Score=35.00 Aligned_cols=28 Identities=21% Similarity=0.513 Sum_probs=20.1
Q ss_pred CCCCC-CcccCC--CCcEEecCCCceecCCCCccc
Q psy14257 139 SDCHH-DCYNTP--EGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 139 ~~C~~-~C~~~~--g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.+|.+ .|.... ++|.|.|++||. |..|+
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce 42 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCE 42 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCS----STTSC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCc----cCCCC
Confidence 35644 677643 689999999996 55665
No 409
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=85.81 E-value=32 Score=34.77 Aligned_cols=242 Identities=10% Similarity=0.018 Sum_probs=111.1
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeeec-CceeEEEeeecCCCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIG-KNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~~-~~~y~~~td~~~~~~~~~~~~ 329 (841)
+.++.|++. ++ +..+-..++.|...++.++...... .+...-.....+++.+.. ++..+ + ...++.
T Consensus 12 V~~~~~s~~-g~--~las~s~D~~v~iw~~~~~~~~~~~-~l~gH~~~V~~v~~s~~~~g~~l~--s-------~s~D~~ 78 (297)
T 2pm7_B 12 IHDAVMDYY-GK--RMATCSSDKTIKIFEVEGETHKLID-TLTGHEGPVWRVDWAHPKFGTILA--S-------CSYDGK 78 (297)
T ss_dssp EEEEEECTT-SS--EEEEEETTSCEEEEEBCSSCBCCCE-EECCCSSCEEEEEECCGGGCSEEE--E-------EETTTE
T ss_pred eEEEEECCC-CC--EEEEEeCCCEEEEEecCCCCcEEEE-EEccccCCeEEEEecCCCcCCEEE--E-------EcCCCE
Confidence 345555544 33 4455556677777666543211111 222112223344443211 12222 1 224567
Q ss_pred EEEEccCCCcccccc--ccCcCCCceEEEEccC-CEEEEEeCCCCeEEEEEecCCcc--EEEEeeeeecCCCccccCCCC
Q psy14257 330 IEKAGMHGENRSPLV--TKNIQWPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSER--TVSFNLEVLGSDSRVGIPNCR 404 (841)
Q Consensus 330 I~~~~~dG~~~~~l~--~~~~~~P~glavD~~~-~~lYwaD~~~~~I~~~~ldG~~~--~~~~~~~~~~~~~~~~i~~~~ 404 (841)
|..+++.......+. ...-.....+++.+.. +.++.+-...+.|...++..... ...+.. ....+
T Consensus 79 v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~----h~~~v------ 148 (297)
T 2pm7_B 79 VMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDA----HAIGV------ 148 (297)
T ss_dssp EEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEEC----CSSCE------
T ss_pred EEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeec----ccCcc------
Confidence 888877643222221 1122345677887752 34445555667888888764421 111110 00000
Q ss_pred CCccccc--------------cceEEEEecCCCcEEEEccCCce----EEEEecCCCCCceeEEEcCCC--CeEEEEecC
Q psy14257 405 PEDNLWI--------------GKNLYWVESNLDQIEVAKLSGQF----RRTLIAGDMESPRAIALDPRF--GLLFWTDWD 464 (841)
Q Consensus 405 ~~avdw~--------------~~~LY~tD~~~~~I~v~~~~G~~----~~~l~~~~l~~P~giavd~~~--g~Ly~td~~ 464 (841)
..+.|. .++++++-...+.|.+.++.... ....+.......++|+++|.. +.++.+-..
T Consensus 149 -~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 149 -NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp -EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred -ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEEC
Confidence 011111 13566776677888888876422 222233344567899999974 455555433
Q ss_pred CCCCeEEEecCCCCC---cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 465 SKAPRIERCSMSGEH---RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 465 ~~~~~I~r~~ldG~~---~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
.+.|..-+++... ...+... ...-.....+++.+.+..|..+.. .+.|...+
T Consensus 228 --D~~v~iWd~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~g~~las~~~-D~~v~lw~ 282 (297)
T 2pm7_B 228 --DRTCIIWTQDNEQGPWKKTLLKE---EKFPDVLWRASWSLSGNVLALSGG-DNKVTLWK 282 (297)
T ss_dssp --TSCEEEEEESSTTSCCEEEESSS---SCCSSCEEEEEECSSSCCEEEEET-TSCEEEEE
T ss_pred --CCcEEEEEeCCCCCccceeeeec---ccCCCcEEEEEECCCCCEEEEEcC-CCcEEEEE
Confidence 3444444443321 1122110 011223456778766555544433 34444443
No 410
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=85.71 E-value=36 Score=35.30 Aligned_cols=146 Identities=12% Similarity=0.087 Sum_probs=77.2
Q ss_pred ceEEEEecCCCcEEEEccCCceE--E-EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEeccc
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFR--R-TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLL 489 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~--~-~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~ 489 (841)
+++..+-...+.|.+.++++... . .+..........|+++|...+|...... ..-+|+.. +......+....
T Consensus 28 g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-~~v~iw~~--~~~~~~~~~~~~-- 102 (345)
T 3fm0_A 28 GTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-ATTCIWKK--NQDDFECVTTLE-- 102 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-SCEEEEEE--CCC-EEEEEEEC--
T ss_pred CCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-CcEEEEEc--cCCCeEEEEEcc--
Confidence 45555656677888888876532 2 2223344567899999987777665543 23344443 333222222210
Q ss_pred CCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCee-EE--EEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEe
Q psy14257 490 TSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH-HV--VLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 490 ~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~-~~--i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~ 565 (841)
..-.....+++.+.+..|. +-...+.|...+++.... .. .+..+ ......+++. ++.++.+-...+.|...+
T Consensus 103 -~h~~~v~~v~~sp~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 103 -GHENEVKSVAWAPSGNLLA-TCSRDKSVWVWEVDEEDEYECVSVLNSH--TQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp -CCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECTTSCEEEEEEECCC--CSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred -CCCCCceEEEEeCCCCEEE-EEECCCeEEEEECCCCCCeEEEEEecCc--CCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 2334567899987655555 444467788888765422 21 22221 1223456653 344444444455555555
Q ss_pred cc
Q psy14257 566 KW 567 (841)
Q Consensus 566 ~~ 567 (841)
..
T Consensus 179 ~~ 180 (345)
T 3fm0_A 179 EE 180 (345)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 411
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=85.68 E-value=36 Score=35.22 Aligned_cols=108 Identities=9% Similarity=0.055 Sum_probs=64.8
Q ss_pred ceEEEEecCCCcEEEEccCCc-------eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC-CCcEEEE
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQ-------FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG-EHRSVIV 484 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~-------~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG-~~~~~i~ 484 (841)
+.+.++-...+.|.+.++... .....+.........|+++|...+|+-... .+.|..-++.. .....+
T Consensus 39 ~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~---D~~v~lwd~~~~~~~~~~- 114 (343)
T 2xzm_R 39 SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSW---DKTLRLWDLRTGTTYKRF- 114 (343)
T ss_dssp CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEET---TSEEEEEETTSSCEEEEE-
T ss_pred CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcC---CCcEEEEECCCCcEEEEE-
Confidence 556666666778888777532 112223334455688999987666654443 35666666643 322222
Q ss_pred EecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEE
Q psy14257 485 RVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHV 530 (841)
Q Consensus 485 ~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~ 530 (841)
. ..-.....+++.+.+..|+-+. ..+.|...++.+.....
T Consensus 115 ~-----~h~~~v~~v~~sp~~~~l~s~~-~d~~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 115 V-----GHQSEVYSVAFSPDNRQILSAG-AEREIKLWNILGECKFS 154 (343)
T ss_dssp E-----CCCSCEEEEEECSSTTEEEEEE-TTSCEEEEESSSCEEEE
T ss_pred c-----CCCCcEEEEEECCCCCEEEEEc-CCCEEEEEeccCCceee
Confidence 2 2334567899987766666544 46788888887654433
No 412
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=85.57 E-value=0.65 Score=34.77 Aligned_cols=36 Identities=19% Similarity=0.465 Sum_probs=22.9
Q ss_pred cccccCCCCCccC--ce-----eecCCCCceEEeecCCeeecCCCCceEe
Q psy14257 171 YLHPCEAWGTCSQ--DC-----EPSVSNNSYKCTCHAGYELEPDMFTCKS 213 (841)
Q Consensus 171 ~~~eC~~~~~Cs~--~C-----~~~~~~g~~~C~C~~G~~l~~d~~~C~~ 213 (841)
+++||. ..+|.+ .| .+. .++|.|.|++||. +..|..
T Consensus 7 ~~~eC~-s~pC~NgGtC~~~~~~d~--~~~y~C~C~~g~~----G~~CE~ 49 (55)
T 3u7u_G 7 KCAEKE-KTFCVNGGECFMVKDLSN--PSRYLCKCPNEFT----GDRCQN 49 (55)
T ss_dssp ECCSTT-TTTSCTTCEEEEECCC----CCCEEEEECTTEE----STTSCE
T ss_pred cCCCCc-CCCCCCCCCcCCCCccCC--CCCEeEeCCCCCc----CCCcCc
Confidence 456663 345643 56 344 6899999999997 456643
No 413
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=85.39 E-value=0.11 Score=38.51 Aligned_cols=40 Identities=20% Similarity=0.375 Sum_probs=26.5
Q ss_pred cEEecCCCceecCCCCccccccccCCCCCccCceeecCCCCceEEeecCCee
Q psy14257 152 FMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 152 ~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~~~~~~g~~~C~C~~G~~ 203 (841)
+.|.|++||. .++|...+.|...-... .++|.|.|++||.
T Consensus 3 ~~C~C~~g~~----------~~pC~NGGtC~~~~~~~--~~~y~C~C~~Gf~ 42 (52)
T 3ca7_A 3 PTYKCPETFD----------AWYCLNDAHCFAVKIAD--LPVYSCECAIGFM 42 (52)
T ss_dssp CCBCCCHHHH----------HHTSCTTCEEEEEEETT--EEEEEEECCTTEE
T ss_pred eeeECCCCCc----------CCcCCCCCEEecCccCC--CCCEEEECCCCCc
Confidence 4689999986 23565555553211112 4679999999997
No 414
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=85.32 E-value=40 Score=35.43 Aligned_cols=199 Identities=11% Similarity=0.023 Sum_probs=103.6
Q ss_pred CceEEEEccCCEEEEEeC-CCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc-ceEEEEecCCCcEEEE
Q psy14257 351 PSSLVIDYNQDILYWCDS-HLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG-KNLYWVESNLDQIEVA 428 (841)
Q Consensus 351 P~glavD~~~~~lYwaD~-~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~-~~LY~tD~~~~~I~v~ 428 (841)
...+++.++++.|.++-. ..+.|+..++........+... .. ..+++|.. +++..+-. .+.+.+.
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-----~~-------V~~v~fspdg~~l~s~s-~~~~~~~ 202 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-----GE-------VKDLHFSTDGKVVAYIT-GSSLEVI 202 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-----SC-------CCEEEECTTSSEEEEEC-SSCEEEE
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-----Cc-------eEEEEEccCCceEEecc-ceeEEEE
Confidence 456888888888877765 4567877777654433222110 00 01222221 33333333 3445554
Q ss_pred c-cCCceEEEEec-CCCCCceeEEEcCCCCeEEEEecCC-CCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccC
Q psy14257 429 K-LSGQFRRTLIA-GDMESPRAIALDPRFGLLFWTDWDS-KAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQL 505 (841)
Q Consensus 429 ~-~~G~~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~-~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~ 505 (841)
. .+|........ ..-...+.+++.|.+.+|..+.... ....|...++.......+.... ........+.|++.+.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 203 STVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQ-VTNRFKGITSMDVDMKG 281 (365)
T ss_dssp ETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEE-EESSCSCEEEEEECTTS
T ss_pred EeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeee-ecCCCCCeEeEEECCCC
Confidence 4 44554433222 1223457899999866665554331 1123444444333222211100 00234456789999766
Q ss_pred CEEEEEeCCCCeEEEEEcCCC-eeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 506 TRIYWIDAKSDSIHTVTYDGK-DHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 506 ~~LYw~d~~~~~I~~~~~dG~-~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~ 566 (841)
..|..+. ..+.|...++... ...++...+ -....+|++. ++.+.++-...+.|+..+.
T Consensus 282 ~~lasgs-~D~~V~iwd~~~~~~~~~~~~gH--~~~V~~v~fSpdg~~laS~S~D~tvrvw~i 341 (365)
T 4h5i_A 282 ELAVLAS-NDNSIALVKLKDLSMSKIFKQAH--SFAITEVTISPDSTYVASVSAANTIHIIKL 341 (365)
T ss_dssp CEEEEEE-TTSCEEEEETTTTEEEEEETTSS--SSCEEEEEECTTSCEEEEEETTSEEEEEEC
T ss_pred CceEEEc-CCCEEEEEECCCCcEEEEecCcc--cCCEEEEEECCCCCEEEEEeCCCeEEEEEc
Confidence 6555444 4578999988654 344444333 2335678874 5667777666677766553
No 415
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=84.59 E-value=0.61 Score=34.57 Aligned_cols=37 Identities=32% Similarity=0.704 Sum_probs=25.1
Q ss_pred cccccCCC--CCccC--cee--ecCCCCceEEeecCCeeecCCCCceEe
Q psy14257 171 YLHPCEAW--GTCSQ--DCE--PSVSNNSYKCTCHAGYELEPDMFTCKS 213 (841)
Q Consensus 171 ~~~eC~~~--~~Cs~--~C~--~~~~~g~~~C~C~~G~~l~~d~~~C~~ 213 (841)
++++|... .+|.+ .|. +. .++|.|.|++||. +..|..
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~--~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIES--LDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESS--SSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCC--CCCEEEECCCCCc----CCcCCc
Confidence 45566422 36654 687 66 8899999999996 455643
No 416
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=84.26 E-value=48 Score=35.53 Aligned_cols=145 Identities=9% Similarity=-0.020 Sum_probs=75.2
Q ss_pred ceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSR 492 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~ 492 (841)
++.+++-...+.|.+.++........+.........++++ ..+|+... . .+.|...++.......... ..
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~sg~-~--dg~i~vwd~~~~~~~~~~~-----~h 212 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYD--ERVIITGS-S--DSTVRVWDVNTGEMLNTLI-----HH 212 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECC--SSEEEEEE-T--TSCEEEEESSSCCEEEEEC-----CC
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEEC--CCEEEEEc-C--CCeEEEEECCCCcEEEEEc-----CC
Confidence 4445555566788888876443333333333455666663 34554444 3 4667777765433222221 22
Q ss_pred CCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeE---EEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCC
Q psy14257 493 GAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHH---VVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 493 ~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~---~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g 569 (841)
-.....++++ .+.|+ +-...+.|...++...... .....+ ......+++.+.+|+.+. ..+.|...+..++
T Consensus 213 ~~~v~~l~~~--~~~l~-s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~l~s~~-~dg~i~vwd~~~~ 286 (435)
T 1p22_A 213 CEAVLHLRFN--NGMMV-TCSKDRSIAVWDMASPTDITLRRVLVGH--RAAVNVVDFDDKYIVSAS-GDRTIKVWNTSTC 286 (435)
T ss_dssp CSCEEEEECC--TTEEE-EEETTSCEEEEECSSSSCCEEEEEECCC--SSCEEEEEEETTEEEEEE-TTSEEEEEETTTC
T ss_pred CCcEEEEEEc--CCEEE-EeeCCCcEEEEeCCCCCCceeeeEecCC--CCcEEEEEeCCCEEEEEe-CCCeEEEEECCcC
Confidence 2334455554 45444 4445678888888754322 222222 223356666555555554 4567777776655
Q ss_pred cceE
Q psy14257 570 SDVT 573 (841)
Q Consensus 570 ~~~~ 573 (841)
+...
T Consensus 287 ~~~~ 290 (435)
T 1p22_A 287 EFVR 290 (435)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 4433
No 417
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=84.26 E-value=20 Score=39.14 Aligned_cols=112 Identities=6% Similarity=-0.057 Sum_probs=67.3
Q ss_pred cceEEE---EecCCCcEEEEccCCc------e-----EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCC
Q psy14257 412 GKNLYW---VESNLDQIEVAKLSGQ------F-----RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSG 477 (841)
Q Consensus 412 ~~~LY~---tD~~~~~I~v~~~~G~------~-----~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG 477 (841)
+..|++ +-...+.|.+.++... . ...+....-....+|+++|..+.++.+-.. .+.|...++..
T Consensus 104 g~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~--Dg~v~iwD~~~ 181 (434)
T 2oit_A 104 NLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA--DGSIAVLQVTE 181 (434)
T ss_dssp SCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET--TSCEEEEEESS
T ss_pred CCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC--CCeEEEEEcCC
Confidence 355655 5555678888876532 1 011122223467899999986666666544 45666666654
Q ss_pred CCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEE
Q psy14257 478 EHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 478 ~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i 531 (841)
.. ..+... ..-..+..+++.+.+..|+.+. ..+.|...++.+.....+
T Consensus 182 ~~-~~~~~~----~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~ 229 (434)
T 2oit_A 182 TV-KVCATL----PSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVI 229 (434)
T ss_dssp SE-EEEEEE----CGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEE
T ss_pred Cc-ceeecc----CCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccc
Confidence 32 222221 1234578899998877777665 467899999986655544
No 418
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=83.66 E-value=50 Score=35.24 Aligned_cols=149 Identities=7% Similarity=-0.036 Sum_probs=84.3
Q ss_pred ceEEEEecCCCcEEEEccCCce----EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQF----RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~----~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
+.+..+-...+.|.+.+..... ..............+++.|..+.++.+-.+.....|...++........+.
T Consensus 242 g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--- 318 (420)
T 4gga_A 242 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--- 318 (420)
T ss_dssp SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE---
T ss_pred CCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec---
Confidence 3344444445566665553211 001112223455788999888877776544335667776765433333332
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeC-CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDA-KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~-~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~ 566 (841)
.-..+..+.+.+..+.|+.+-. ..+.|...++........+.++ -..-..|++. ++.+.+|-...+.|...+.
T Consensus 319 ---~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH--~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 319 ---AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH--TSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp ---CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ---cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 2345678888888888887654 4578888888654433333332 2334677774 4566666656677766665
Q ss_pred cCC
Q psy14257 567 WNG 569 (841)
Q Consensus 567 ~~g 569 (841)
+..
T Consensus 394 ~~~ 396 (420)
T 4gga_A 394 FEL 396 (420)
T ss_dssp SCS
T ss_pred CCC
Confidence 443
No 419
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=83.27 E-value=52 Score=35.11 Aligned_cols=208 Identities=12% Similarity=0.002 Sum_probs=104.5
Q ss_pred cCCCceEEEEccCCEEEEEeCCCCeEEEEEecC---Cc-c--EEEEeeeeecCCCccccCCCCCCccccc-cceEEEEec
Q psy14257 348 IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG---SE-R--TVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVES 420 (841)
Q Consensus 348 ~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG---~~-~--~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~ 420 (841)
-.....|++.+..+.++++-...+.|...++.. .. . ...+. .... ..++.|. .+.++++-.
T Consensus 63 ~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-----h~~~-------v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 63 PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-----CSST-------VTQITMIPNFDAFAVSS 130 (437)
T ss_dssp TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE-----CSSC-------EEEEEECTTSSEEEEEE
T ss_pred CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc-----CCCC-------EEEEEEeCCCCEEEEEe
Confidence 345678888883344455555778888888754 21 1 11111 0000 0122222 145555555
Q ss_pred CCCcEEEEcc----CCceEEEEecC-----------CCCCceeEE--EcCCCCeEEEEecCCCCCeEEEecCCCCCcEEE
Q psy14257 421 NLDQIEVAKL----SGQFRRTLIAG-----------DMESPRAIA--LDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVI 483 (841)
Q Consensus 421 ~~~~I~v~~~----~G~~~~~l~~~-----------~l~~P~gia--vd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i 483 (841)
..+.|.+.++ .|...+.+... .-.....++ ..+...+|+... . .+.|...++........
T Consensus 131 ~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~--d~~i~iwd~~~~~~~~~ 207 (437)
T 3gre_A 131 KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT-N--LSRVIIFDIRTLERLQI 207 (437)
T ss_dssp TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-T--TSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-C--CCeEEEEeCCCCeeeEE
Confidence 6678888777 34433322211 112223333 334434444433 3 46787777754443333
Q ss_pred EEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEc-CCCCCCcceEEEEe-----cCeEEEEeCC
Q psy14257 484 VRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLS-NHDSLTHPFAIALF-----ENHVYWTDWR 557 (841)
Q Consensus 484 ~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~-~~~~l~~P~gla~~-----~~~lY~td~~ 557 (841)
.... ..-.....+++++.+..|+.+. ..+.|...++.......... .+ -.....|++. ++.+.++-..
T Consensus 208 ~~~~---~h~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~s~~~~~l~s~~~ 281 (437)
T 3gre_A 208 IENS---PRHGAVSSICIDEECCVLILGT-TRGIIDIWDIRFNVLIRSWSFGD--HAPITHVEVCQFYGKNSVIVVGGSS 281 (437)
T ss_dssp EECC---GGGCCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTEEEEEEBCTT--CEEEEEEEECTTTCTTEEEEEEEST
T ss_pred EccC---CCCCceEEEEECCCCCEEEEEc-CCCeEEEEEcCCccEEEEEecCC--CCceEEEEeccccCCCccEEEEEcC
Confidence 3310 0234678899987655555444 46788888887543322222 11 1112344332 2445556556
Q ss_pred CCeEEEEeccCCcceEEEe
Q psy14257 558 TNSVIRANKWNGSDVTLIQ 576 (841)
Q Consensus 558 ~~~i~~~~~~~g~~~~~i~ 576 (841)
.+.|...+..+++....+.
T Consensus 282 dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 282 KTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp TEEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEcCCCcEEEEEE
Confidence 6777777776666554443
No 420
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=83.05 E-value=49 Score=34.65 Aligned_cols=144 Identities=10% Similarity=0.031 Sum_probs=79.4
Q ss_pred ceEEEEecCCCcEEEEccC-CceEEEEecCCC-------CCc--eeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcE
Q psy14257 413 KNLYWVESNLDQIEVAKLS-GQFRRTLIAGDM-------ESP--RAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRS 481 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~l-------~~P--~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~ 481 (841)
+.||++.. .+.|..++.. |+.+-..-.... ..+ ..++++ ++.||+... .+.|+..+.+ |+.+.
T Consensus 54 ~~v~~~~~-~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~---~g~l~a~d~~tG~~~W 127 (376)
T 3q7m_A 54 NVVYAADR-AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS--GGHVYIGSE---KAQVYALNTSDGTVAW 127 (376)
T ss_dssp TEEEEECT-TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE--TTEEEEEET---TSEEEEEETTTCCEEE
T ss_pred CEEEEEcC-CCeEEEEEccCCceeeeecCccccccccccCcccccCceEe--CCEEEEEcC---CCEEEEEECCCCCEEE
Confidence 78888764 4578888874 654422221110 111 334554 688998874 3689999875 55433
Q ss_pred EEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc-CCCeeEEEEcCCCCC--CcceEEEEecCeEEEEeCCC
Q psy14257 482 VIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY-DGKDHHVVLSNHDSL--THPFAIALFENHVYWTDWRT 558 (841)
Q Consensus 482 ~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~-dG~~~~~i~~~~~~l--~~P~gla~~~~~lY~td~~~ 558 (841)
.. .. . ..+ ....+++ +++||+... .+.|..++. +|..+-........+ ......++.++.||+.. ..
T Consensus 128 ~~-~~--~-~~~--~~~p~~~--~~~v~v~~~-~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~-~~ 197 (376)
T 3q7m_A 128 QT-KV--A-GEA--LSRPVVS--DGLVLIHTS-NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGG-DN 197 (376)
T ss_dssp EE-EC--S-SCC--CSCCEEE--TTEEEEECT-TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECC-TT
T ss_pred EE-eC--C-Cce--EcCCEEE--CCEEEEEcC-CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEc-CC
Confidence 22 21 0 111 1122343 578887653 568999997 465554443221111 00123455678888864 35
Q ss_pred CeEEEEeccCCcce
Q psy14257 559 NSVIRANKWNGSDV 572 (841)
Q Consensus 559 ~~i~~~~~~~g~~~ 572 (841)
+.|+.++..+|+..
T Consensus 198 g~l~~~d~~tG~~~ 211 (376)
T 3q7m_A 198 GRVSAVLMEQGQMI 211 (376)
T ss_dssp TEEEEEETTTCCEE
T ss_pred CEEEEEECCCCcEE
Confidence 68888888777654
No 421
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=82.12 E-value=47 Score=33.84 Aligned_cols=242 Identities=7% Similarity=-0.041 Sum_probs=115.0
Q ss_pred eeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCCCCccceEEeee-cCceeEEEeeecCCCCCCCCCC
Q psy14257 251 TIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGLSTAEGLAVDWI-GKNLYMFWAFWSLSPSNSSDGG 329 (841)
Q Consensus 251 ~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l~~p~giavD~~-~~~~y~~~td~~~~~~~~~~~~ 329 (841)
+.+++|.+. +. +..+-..++.|...++..+.. .....+...-.....+++.+. .++..+ + ...++.
T Consensus 16 V~~v~~s~~-g~--~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~~~~~~~~~l~--s-------~s~D~~ 82 (316)
T 3bg1_A 16 IHDAQMDYY-GT--RLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAWAHPMYGNILA--S-------CSYDRK 82 (316)
T ss_dssp EEEEEECGG-GC--EEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEECCGGGSSCEE--E-------EETTSC
T ss_pred EEEeeEcCC-CC--EEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEeCCCCCCCEEE--E-------EECCCE
Confidence 445666554 23 455556677777777665421 011122222223444555321 112222 1 224567
Q ss_pred EEEEccCCCccccc--cccCcCCCceEEEEccC-CEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCC
Q psy14257 330 IEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPE 406 (841)
Q Consensus 330 I~~~~~dG~~~~~l--~~~~~~~P~glavD~~~-~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~ 406 (841)
|..+++.......+ ....-.....|++.+.. +.++.+-...+.|+..++.+.....+.... .+.... ..
T Consensus 83 v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-~~h~~~-------v~ 154 (316)
T 3bg1_A 83 VIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-NAHTIG-------CN 154 (316)
T ss_dssp EEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-TSSSSC-------BC
T ss_pred EEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-ccccCC-------cc
Confidence 88887754322211 11233456788888763 556666677788888887764322110000 000000 00
Q ss_pred cccccc------------------ceEEEEecCCCcEEEEccCCc--e-EEEEecCCCCCceeEEEcCCC---CeEEEEe
Q psy14257 407 DNLWIG------------------KNLYWVESNLDQIEVAKLSGQ--F-RRTLIAGDMESPRAIALDPRF---GLLFWTD 462 (841)
Q Consensus 407 avdw~~------------------~~LY~tD~~~~~I~v~~~~G~--~-~~~l~~~~l~~P~giavd~~~---g~Ly~td 462 (841)
++.|.. ++++.+-...+.|.+.++... . ....+.......+++++.|.. +.++.+-
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 111111 345666666778888877643 1 112222333456899999874 2344443
Q ss_pred cCCCCCeEEEecCCCC----C-cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEE
Q psy14257 463 WDSKAPRIERCSMSGE----H-RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 463 ~~~~~~~I~r~~ldG~----~-~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~ 522 (841)
.. .+.|..-+++.. . ...+.. .-.....+++.+.+..|..+. ..+.|...+
T Consensus 235 s~--D~~v~iw~~~~~~~~~~~~~~~~~------~~~~v~~v~~sp~g~~las~~-~D~~v~lw~ 290 (316)
T 3bg1_A 235 SQ--DGRVFIWTCDDASSNTWSPKLLHK------FNDVVWHVSWSITANILAVSG-GDNKVTLWK 290 (316)
T ss_dssp ET--TCEEEEEECSSTTCCCCBCCEEEE------CSSCEEEEEECTTTCCEEEEE-SSSCEEEEE
T ss_pred cC--CCeEEEEEccCccccchhhhhhhc------CCCcEEEEEEcCCCCEEEEEc-CCCeEEEEE
Confidence 33 355555555431 1 122222 123456778876555554433 234444444
No 422
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=82.01 E-value=0.48 Score=49.15 Aligned_cols=31 Identities=32% Similarity=0.724 Sum_probs=28.2
Q ss_pred CCCCCcccCCCCcEEecCCCceecCCCCccc
Q psy14257 140 DCHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 140 ~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.|++.|.|+.|++.|.|.+||.|..+++.|.
T Consensus 132 ~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 132 PCDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCCCccccccCceEeecCCCceeccCCCCcc
Confidence 5999999999999999999999988877775
No 423
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=81.91 E-value=56 Score=34.54 Aligned_cols=142 Identities=9% Similarity=0.007 Sum_probs=72.9
Q ss_pred ceEEEEecCCCcEEEEccCCc-eEEEEe------cCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-----
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQ-FRRTLI------AGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR----- 480 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~-~~~~l~------~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~----- 480 (841)
++++.+-...+.|.+.++... ....+. .........|+++|...+|+.... .+.|...++.....
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~---d~~v~~wd~~~~~~~~~~~ 295 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL---DRSVKLWNLQNANNKSDSK 295 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET---TSEEEEEEC----------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC---CCEEEEEECCCCCCccccc
Confidence 555556556677777776543 232321 112345678999988666655443 35565555532111
Q ss_pred -------EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEec-----
Q psy14257 481 -------SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFE----- 548 (841)
Q Consensus 481 -------~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~----- 548 (841)
..... ..-.....+++.+.+..|+ +-...+.|...++........+..+ -.....+++..
T Consensus 296 ~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~l~~h--~~~v~~v~~~~~~~~~ 367 (393)
T 1erj_A 296 TPNSGTCEVTYI-----GHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSGNPLLMLQGH--RNSVISVAVANGSSLG 367 (393)
T ss_dssp -----CEEEEEE-----CCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEECSSCTTC
T ss_pred CCCCCcceEEEe-----cccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEECCC--CCCEEEEEecCCcCcC
Confidence 01111 1223456788876555554 4445678888887654433333332 12335566542
Q ss_pred --CeEEEEeCCCCeEEEEe
Q psy14257 549 --NHVYWTDWRTNSVIRAN 565 (841)
Q Consensus 549 --~~lY~td~~~~~i~~~~ 565 (841)
+.++++-...+.|...+
T Consensus 368 p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 368 PEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp TTCEEEEEEETTSEEEEEE
T ss_pred CCCCEEEEECCCCcEEECc
Confidence 45566655555554443
No 424
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=81.82 E-value=18 Score=39.52 Aligned_cols=134 Identities=7% Similarity=0.023 Sum_probs=80.3
Q ss_pred CCceEEEEecCCCEEEE---EECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEE
Q psy14257 669 FSPNNLNFDAANKKIYW---TDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAI 745 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw---~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAv 745 (841)
..+.+|+|++..+.|++ +-...++|+..++....... .. .. .++ ....+....-..+.+|++
T Consensus 93 ~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~-~~-~~----~~~---------~~~~~~~~h~~~V~~v~~ 157 (434)
T 2oit_A 93 FPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEA-KQ-QK----RPF---------AYHKLLKDAGGMVIDMKW 157 (434)
T ss_dssp SCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTT-CS-SC----CCS---------EEEECCCSGGGSEEEEEE
T ss_pred CcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCC-cC-Cc----cee---------eeeeccCCCCCceEEEEE
Confidence 35789999999998887 44456788888775431000 00 00 000 001122223456888999
Q ss_pred eecCCcEEEEecCCCCCeEEEEecCCcceEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEecCCCcceEEEEecCCCce
Q psy14257 746 DWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEMAFMDGTKR 825 (841)
Q Consensus 746 D~~~~~LYw~~~~~~~~~I~v~~l~g~~~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d~~~~~~~I~~~~~dG~~~ 825 (841)
.+..++++.+- ...++|.+.++........... .-..+.+++.+|...+|+-..... +|...+++|...
T Consensus 158 ~p~~~~~las~--s~Dg~v~iwD~~~~~~~~~~~~------~~~~v~~v~wspdg~~lasgs~dg---~v~iwd~~~~~~ 226 (434)
T 2oit_A 158 NPTVPSMVAVC--LADGSIAVLQVTETVKVCATLP------STVAVTSVCWSPKGKQLAVGKQNG---TVVQYLPTLQEK 226 (434)
T ss_dssp CSSCTTEEEEE--ETTSCEEEEEESSSEEEEEEEC------GGGCEEEEEECTTSSCEEEEETTS---CEEEECTTCCEE
T ss_pred CCCCCCEEEEE--ECCCeEEEEEcCCCcceeeccC------CCCceeEEEEcCCCCEEEEEcCCC---cEEEEccCCccc
Confidence 88867777773 3578899999876533211111 025789999999866666555433 577777776554
Q ss_pred EEE
Q psy14257 826 ETV 828 (841)
Q Consensus 826 ~~l 828 (841)
..+
T Consensus 227 ~~~ 229 (434)
T 2oit_A 227 KVI 229 (434)
T ss_dssp EEE
T ss_pred ccc
Confidence 444
No 425
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=81.62 E-value=51 Score=33.86 Aligned_cols=151 Identities=10% Similarity=0.028 Sum_probs=67.8
Q ss_pred ceEEEEecCCCcEEEEccC-C-c--eEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLS-G-Q--FRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~-G-~--~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
+++..+-...+.|.+.+++ + . .....+.........|+++|...+|.-.... ..-+|+... ....+.+....
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-~~i~iW~~~--~~~~~~~~~~~- 194 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-DTVRIWKDY--DDDWECVAVLN- 194 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-SCEEEEEEE--TTEEEEEEEEC-
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-CeEEEEECC--CCCeeEEEEcc-
Confidence 3444444455667777663 2 1 1112233334567889999876655544433 233444332 22112221110
Q ss_pred cCCCCCCceeEEEeccC-CEEEEEeCCCCeEEEEEcCCCe-----e-EEEEcCCC-CCCcceEEEEecCeEEEEeCCCCe
Q psy14257 489 LTSRGAWPNGLTLDYQL-TRIYWIDAKSDSIHTVTYDGKD-----H-HVVLSNHD-SLTHPFAIALFENHVYWTDWRTNS 560 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~-~~LYw~d~~~~~I~~~~~dG~~-----~-~~i~~~~~-~l~~P~gla~~~~~lY~td~~~~~ 560 (841)
..-.....+++.+.. +.+..+-...+.|...++.+.. . ..+..... .-...+.+++..+.++.+-...+.
T Consensus 195 --~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~ 272 (330)
T 2hes_X 195 --GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGV 272 (330)
T ss_dssp --CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSC
T ss_pred --CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCE
Confidence 223345677887653 3333344445666666654320 0 11111000 112235566644444444445566
Q ss_pred EEEEeccCC
Q psy14257 561 VIRANKWNG 569 (841)
Q Consensus 561 i~~~~~~~g 569 (841)
|...+..++
T Consensus 273 v~iw~~~~~ 281 (330)
T 2hes_X 273 LAVYEEVDG 281 (330)
T ss_dssp EEEEEEETT
T ss_pred EEEEEcCCC
Confidence 655554333
No 426
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=81.54 E-value=75 Score=36.07 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=13.4
Q ss_pred eeEEEcCCCCeEEEEe
Q psy14257 447 RAIALDPRFGLLFWTD 462 (841)
Q Consensus 447 ~giavd~~~g~Ly~td 462 (841)
.++|+||.++.+|+..
T Consensus 415 ~~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPA 430 (582)
T ss_dssp SCCEECTTTCCEEEEE
T ss_pred CCceECCCCCEEEEec
Confidence 3679999999999875
No 427
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=80.58 E-value=0.69 Score=47.68 Aligned_cols=32 Identities=34% Similarity=0.711 Sum_probs=29.1
Q ss_pred CCCCCCcccCCCCcEEecCCCceecCCCCccc
Q psy14257 139 SDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 139 ~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
..|.+.|.+..+++.|.|.+||.+..+.+.|.
T Consensus 132 ~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 132 LSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 47989999999999999999999998888876
No 428
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=79.12 E-value=1e+02 Score=35.79 Aligned_cols=54 Identities=13% Similarity=0.096 Sum_probs=29.0
Q ss_pred EEeccCCEEEEEeCCCCeEEEEEcC-CCeeEEEEcCCCCCCcceEEEEecCeEEEEe
Q psy14257 500 TLDYQLTRIYWIDAKSDSIHTVTYD-GKDHHVVLSNHDSLTHPFAIALFENHVYWTD 555 (841)
Q Consensus 500 alD~~~~~LYw~d~~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~gla~~~~~lY~td 555 (841)
++...++.||... ..+.|+.+|.+ |+.+-.+.........|... -.+|+.|++-
T Consensus 481 ~~~tagglvf~gt-~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty-~~~G~qyv~~ 535 (689)
T 1yiq_A 481 TLSTAGNLVFEGS-ADGRVIAYAADTGEKLWEQPAASGVMAAPVTY-SVDGEQYVTF 535 (689)
T ss_dssp EEEETTTEEEEEC-TTSEEEEEETTTCCEEEEEECSSCCCSCCEEE-EETTEEEEEE
T ss_pred cceECCCEEEEEC-CCCcEEEEECCCCccceeeeCCCCcccCceEE-EECCEEEEEE
Confidence 3444567777664 45678888765 55444443333333345322 2456777663
No 429
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=78.59 E-value=60 Score=36.77 Aligned_cols=193 Identities=11% Similarity=0.036 Sum_probs=106.1
Q ss_pred cceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCC----CCccceEEeeecCceeEEEeeecCCCCC
Q psy14257 249 KNTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGL----STAEGLAVDWIGKNLYMFWAFWSLSPSN 324 (841)
Q Consensus 249 ~~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l----~~p~giavD~~~~~~y~~~td~~~~~~~ 324 (841)
..+.++.|.++.. ..-+-..++.|...+.+ .....+.... .....+|+.|.++.++. .
T Consensus 86 ~~V~~vawSPdG~---~LAs~s~dg~V~iwd~~-----~~l~~l~~~~~~~~~sv~svafSPDG~~LAs----------g 147 (588)
T 2j04_A 86 CYPRVCKPSPIDD---WMAVLSNNGNVSVFKDN-----KMLTNLDSKGNLSSRTYHCFEWNPIESSIVV----------G 147 (588)
T ss_dssp CCEEEEEECSSSS---CEEEEETTSCEEEEETT-----EEEEECCCSSCSTTTCEEEEEECSSSSCEEE----------E
T ss_pred CcEEEEEECCCCC---EEEEEeCCCcEEEEeCC-----ceeeeccCCCccccccEEEEEEcCCCCEEEE----------E
Confidence 3467777777532 33344455555554321 1111111110 12456777776655443 2
Q ss_pred CCCCCEEEEccCCCcc--------cccc---ccCcCCCceEEEEccCCEEEEEeCCCCeEEEEEecCCccEE-EEeeeee
Q psy14257 325 SSDGGIEKAGMHGENR--------SPLV---TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTV-SFNLEVL 392 (841)
Q Consensus 325 ~~~~~I~~~~~dG~~~--------~~l~---~~~~~~P~glavD~~~~~lYwaD~~~~~I~~~~ldG~~~~~-~~~~~~~ 392 (841)
..+|.|..+++.+... .++- .....+-..+++.+++ +.+-...+.|+..++++..... ...+..
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~- 223 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQN- 223 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEEC-
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecc-
Confidence 3467888898877643 1111 1123577788888765 5666778899999998876421 111100
Q ss_pred cCCCccccCCCCCCccccccceEEEEecCCCcEEEEccCCceEEEEecCCCCCceeEEE--cCCCCeEEEEecCCCCCeE
Q psy14257 393 GSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIAL--DPRFGLLFWTDWDSKAPRI 470 (841)
Q Consensus 393 ~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~~P~giav--d~~~g~Ly~td~~~~~~~I 470 (841)
+. .....+++|.+..|-.+ . .++|...++.+....++..+......+|++ .|+...|-.+... .. ++
T Consensus 224 ~h-------~~~V~svaFsg~~LASa-~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~ed-G~-kl 292 (588)
T 2j04_A 224 AS-------RRKITDLKIVDYKVVLT-C-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKT-SY-KV 292 (588)
T ss_dssp CC-------SSCCCCEEEETTEEEEE-C-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSC-EE-EE
T ss_pred cc-------cCcEEEEEEECCEEEEE-e-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCC-CC-EE
Confidence 00 01123566764344333 3 489999999988775555455667788999 7664444444422 12 46
Q ss_pred EEec
Q psy14257 471 ERCS 474 (841)
Q Consensus 471 ~r~~ 474 (841)
+..+
T Consensus 293 w~~d 296 (588)
T 2j04_A 293 LLED 296 (588)
T ss_dssp EESS
T ss_pred Eeec
Confidence 6554
No 430
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=77.88 E-value=1.2e+02 Score=35.88 Aligned_cols=219 Identities=13% Similarity=0.076 Sum_probs=112.2
Q ss_pred CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc------CcCCCceEEEEcc-CCEEEEEeCC-
Q psy14257 298 TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK------NIQWPSSLVIDYN-QDILYWCDSH- 369 (841)
Q Consensus 298 ~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~------~~~~P~glavD~~-~~~lYwaD~~- 369 (841)
...+|++++...+..+.-+ ..+.|+|..-.|+.-+.+... ....-..|++|+. .++||++-..
T Consensus 16 ~i~~i~~~p~~~~~~~a~~---------~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~ 86 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYART---------DIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRY 86 (789)
T ss_dssp CEEEEEECSSSTTCEEEEE---------SSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSC
T ss_pred cEEEEEECCCCCCEEEEEe---------cCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCcc
Confidence 4556777765333322222 234788887777665554331 1234567999974 4678887543
Q ss_pred C----CeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCcccccc-ceEEEEecCCCcEEEEccCCceEEEEecC---
Q psy14257 370 L----NTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIG-KNLYWVESNLDQIEVAKLSGQFRRTLIAG--- 441 (841)
Q Consensus 370 ~----~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~-~~LY~tD~~~~~I~v~~~~G~~~~~l~~~--- 441 (841)
. ..|++-.=.|..-+.+........ ...+...-..++++..+ +.||... ..+.|++..-.|+.=+.+...
T Consensus 87 ~~~~~~~v~~S~DgG~TW~~~~~~~~~~~-~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 87 VGDEWAAFYVSEDRGQSFTIYESPFPMGA-NDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWKSSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp TTSSCCEEEEESSTTSEEEEEECSSCCCT-TSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEEESSTTSSCEEETTSCCC
T ss_pred CCCcccEEEEECCCCCcceeccCCcccCc-cCCCccceeEEEEcCCCCCEEEEEe-ccCCEEEECCCCcccCCCccCccc
Confidence 2 566665444444443321100000 00000000123444433 4555543 235677665556543333211
Q ss_pred --CCCCceeEEEcCCC-CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCC--------------CCCCceeEEEecc
Q psy14257 442 --DMESPRAIALDPRF-GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTS--------------RGAWPNGLTLDYQ 504 (841)
Q Consensus 442 --~l~~P~giavd~~~-g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~--------------~~~~P~glalD~~ 504 (841)
.-.....|+++|.+ +.||..... ...|++..=.|..-+.+.. .... .+..|..|++++.
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~--~~~v~~S~DgG~TW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 240 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATA--PQGMYVTHDGGVSWEPVAG--QPSSWLNRTTGAFPDKKPASIAPQPMKVALT 240 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESS--TTCEEEESSTTSSCEECTT--CCCSCCHHHHHTSTTCCCSSSSCEEEEEEEC
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcC--CCeEEEEcCCCcCcccCCC--CcCccccccccccCcccccccccceeEEcCC
Confidence 00233578889865 478887754 2678887655655544321 1000 1123488899977
Q ss_pred CCEEEEEe--------CCCCeEEEEEcCCCeeEEE
Q psy14257 505 LTRIYWID--------AKSDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 505 ~~~LYw~d--------~~~~~I~~~~~dG~~~~~i 531 (841)
.++||.+- ...+.|++.+-.|..-+.+
T Consensus 241 ~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~ 275 (789)
T 1sqj_A 241 PNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDI 275 (789)
T ss_dssp SSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEEC
T ss_pred CCeEEEEEecCCCCCCCCCceEEEEeCCCCceEEC
Confidence 88999872 2456788877556544433
No 431
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=76.62 E-value=1.6 Score=50.61 Aligned_cols=83 Identities=27% Similarity=0.480 Sum_probs=50.6
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCcccc-------------cccccC--CCCCC--CcccCCCCcEEecC------
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFCD-------------EKQCLR--SDCHH--DCYNTPEGFMCVCP------ 157 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~-------------eC~~~~--~~C~~--~C~~~~g~~~C~C~------ 157 (841)
.|.+. |.|. ...| .|..||.+..|. +|...+ ..|++ .|.. ..|.|+
T Consensus 436 ~Cs~~-G~C~--~g~C----~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----G~C~C~~~~~~~ 504 (687)
T 3k6s_B 436 LCHGK-GFLE--CGIC----RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPG 504 (687)
T ss_dssp TGGGS-EEES--SSSE----EECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET----TEEEECCCCSTT
T ss_pred CCCCC-CEEe--CCEe----EcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC----CEEEcCCCCCCC
Confidence 56554 6665 2345 788888777662 343211 13543 5652 299999
Q ss_pred CCceecCCCCccc-cccccCC--CCCccC----ceeecCCCCceEEeecCCeee
Q psy14257 158 RDMYLQPDLITCS-YLHPCEA--WGTCSQ----DCEPSVSNNSYKCTCHAGYEL 204 (841)
Q Consensus 158 ~Gy~l~~d~~~C~-~~~eC~~--~~~Cs~----~C~~~~~~g~~~C~C~~G~~l 204 (841)
+||. |..|+ +..+|.. ...|+. .|.. .+|.|.+||..
T Consensus 505 ~G~~----G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~------g~C~C~~G~~G 548 (687)
T 3k6s_B 505 KLIY----GQYCECDTINCERYNGQVCGGPGRGLCFC------GKCRCHPGFEG 548 (687)
T ss_dssp CCEE----STTSCEESSCSCEETTEETSHHHHEEEET------TEEEECTTCCS
T ss_pred CCcc----ccccccccccccCCCCcCcCCCCCCeEEC------CEEEcCCCCcC
Confidence 9997 67786 4567752 234643 3432 27999999973
No 432
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=76.53 E-value=78 Score=33.09 Aligned_cols=75 Identities=8% Similarity=-0.007 Sum_probs=54.2
Q ss_pred CCceEEEEecCCCEEEEEECCCCeEEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEeec
Q psy14257 669 FSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWI 748 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~~ 748 (841)
..+.+|+|.|..+.|.... ..++|+..++.... ....+.......+.+||+.+.
T Consensus 270 ~~V~~~~~Spdg~~lasgs-~D~~V~iwd~~~~~-------------------------~~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 270 KGITSMDVDMKGELAVLAS-NDNSIALVKLKDLS-------------------------MSKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp SCEEEEEECTTSCEEEEEE-TTSCEEEEETTTTE-------------------------EEEEETTSSSSCEEEEEECTT
T ss_pred CCeEeEEECCCCCceEEEc-CCCEEEEEECCCCc-------------------------EEEEecCcccCCEEEEEECCC
Confidence 4567999999888777665 57889988886544 023444556678899999998
Q ss_pred CCcEEEEecCCCCCeEEEEecCCc
Q psy14257 749 AQNMFIAVSSPTQSKIVVCNLEGE 772 (841)
Q Consensus 749 ~~~LYw~~~~~~~~~I~v~~l~g~ 772 (841)
++.|.=. ...++|++.++...
T Consensus 324 g~~laS~---S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 324 STYVASV---SAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEE---ETTSEEEEEECCTT
T ss_pred CCEEEEE---eCCCeEEEEEcCCC
Confidence 8766544 35689999998543
No 433
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=76.07 E-value=1.1e+02 Score=34.73 Aligned_cols=29 Identities=10% Similarity=0.090 Sum_probs=20.5
Q ss_pred EEEecCeEEEEeCCCCeEEEEeccCCcceE
Q psy14257 544 IALFENHVYWTDWRTNSVIRANKWNGSDVT 573 (841)
Q Consensus 544 la~~~~~lY~td~~~~~i~~~~~~~g~~~~ 573 (841)
++..++.||+... .+.++-++..+|+.+-
T Consensus 480 ~~tagg~vf~gt~-dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 480 MATAGDLVFYGTL-DGYLKARDSDTGDLLW 508 (599)
T ss_dssp EEETTTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred eEecCCEEEEECC-CCeEEEEECCCCCEEE
Confidence 5556788888653 5678888888887553
No 434
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=76.01 E-value=0.82 Score=33.90 Aligned_cols=23 Identities=17% Similarity=0.496 Sum_probs=18.6
Q ss_pred Ccc--cCCCCcEEecCCCceecCCCCccc
Q psy14257 144 DCY--NTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 144 ~C~--~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.|. +..++|.|.|++||. |..|+
T Consensus 19 ~C~~~~~~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 19 VCMYIEALDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp EEEEETTTTEEEEEECTTEE----STTSC
T ss_pred EEeeecCCCCEEEecCCCCc----CCCCC
Confidence 676 667889999999997 56675
No 435
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=73.72 E-value=2.3 Score=43.97 Aligned_cols=33 Identities=30% Similarity=0.808 Sum_probs=29.9
Q ss_pred CccCceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 180 TCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 180 ~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
.|+|.|.++ .+++.|.|.+||.|..+.+.|...
T Consensus 132 ~c~~~C~n~--~g~~~csC~~Gy~L~~d~~~C~~~ 164 (286)
T 1nt0_A 132 PCDHYCHXY--LGGYYCSCRVGYILHQNKHTCSAL 164 (286)
T ss_dssp CCSSEEEEE--TTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCCCccccc--cCceEeecCCCceeccCCCCcccc
Confidence 599999999 999999999999999998888753
No 436
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=71.86 E-value=1.3e+02 Score=33.64 Aligned_cols=119 Identities=18% Similarity=0.303 Sum_probs=66.7
Q ss_pred EEEEccCCceEEEEecCCCC-CceeEEEcCCCCeE--EEE-ecCC---------CCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 425 IEVAKLSGQFRRTLIAGDME-SPRAIALDPRFGLL--FWT-DWDS---------KAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 425 I~v~~~~G~~~~~l~~~~l~-~P~giavd~~~g~L--y~t-d~~~---------~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+.++.|+|.....++..+.. +-.-.|.|..++.| -|+ +... .++.+..+++||-.+..|+.
T Consensus 270 ~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~vaDVDgDG~dEIv~------ 343 (591)
T 2zux_A 270 AGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIADVDGDGKDEIIF------ 343 (591)
T ss_dssp EEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEECCSSSSSCEEEE------
T ss_pred eeEEECCCCCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeEeCCCCCCceEEE------
Confidence 44566677654444433322 22234566556644 453 3221 24689999999988888876
Q ss_pred CCCCceeEEEeccCCEEEEEeC--CCCeEEEEEcCCC--eeEEEEcCCCCCCcceEEEEe---cCeEEEEeC
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDA--KSDSIHTVTYDGK--DHHVVLSNHDSLTHPFAIALF---ENHVYWTDW 556 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~--~~~~I~~~~~dG~--~~~~i~~~~~~l~~P~gla~~---~~~lY~td~ 556 (841)
-+.++|. ++.+.|+-. ..+.+...+++.. ..+++.-... -..|.|..+. .+.++|.-.
T Consensus 344 -----Gs~~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~-~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 344 -----GSMAVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHED-KNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp -----TTEEECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCC-TTSSCSEEEEETTTCCEEEEEC
T ss_pred -----eeeEECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecC-CCCCCccEEEECCCCcEEEEcC
Confidence 2358895 566666643 2347777777654 3344433221 2346677664 366766643
No 437
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=71.06 E-value=1e+02 Score=31.94 Aligned_cols=74 Identities=3% Similarity=-0.025 Sum_probs=50.8
Q ss_pred CCceEEEEecCCCEEEEEECCCCe-EEEEEcccCceeeeeeeeeeeecccccccccccCceEEEEeeC-CCCCcceeEEe
Q psy14257 669 FSPNNLNFDAANKKIYWTDQEYNE-VKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDA-GISHPSGLAID 746 (841)
Q Consensus 669 ~~~~~v~~d~~~~~iyw~d~~~~~-I~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p~glAvD 746 (841)
..+.+|+|+|....|.-.. ..++ |+..++.... ....+... ....+..|++.
T Consensus 196 ~~v~~~~~s~~g~~l~s~s-~d~~~v~iwd~~~~~-------------------------~~~~~~~g~h~~~v~~~~~s 249 (355)
T 3vu4_A 196 NPIKMVRLNRKSDMVATCS-QDGTIIRVFKTEDGV-------------------------LVREFRRGLDRADVVDMKWS 249 (355)
T ss_dssp SCEEEEEECTTSSEEEEEE-TTCSEEEEEETTTCC-------------------------EEEEEECTTCCSCEEEEEEC
T ss_pred CceEEEEECCCCCEEEEEe-CCCCEEEEEECCCCc-------------------------EEEEEEcCCCCCcEEEEEEC
Confidence 4578999999766665444 6787 8888886544 02222212 45678899999
Q ss_pred ecCCcEEEEecCCCCCeEEEEecCC
Q psy14257 747 WIAQNMFIAVSSPTQSKIVVCNLEG 771 (841)
Q Consensus 747 ~~~~~LYw~~~~~~~~~I~v~~l~g 771 (841)
+.++.|..+. ..++|.+.++..
T Consensus 250 ~~~~~l~s~s---~d~~v~iw~~~~ 271 (355)
T 3vu4_A 250 TDGSKLAVVS---DKWTLHVFEIFN 271 (355)
T ss_dssp TTSCEEEEEE---TTCEEEEEESSC
T ss_pred CCCCEEEEEE---CCCEEEEEEccC
Confidence 9887776662 468899999864
No 438
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=69.88 E-value=80 Score=35.24 Aligned_cols=224 Identities=11% Similarity=-0.055 Sum_probs=106.8
Q ss_pred CCCCEEEEccCCCcccc----ccccCcCCCceEEEEcc-----CCEEEEEeCCCCeEEEEEecCCccE--EEEeeeeecC
Q psy14257 326 SDGGIEKAGMHGENRSP----LVTKNIQWPSSLVIDYN-----QDILYWCDSHLNTVESVRVDGSERT--VSFNLEVLGS 394 (841)
Q Consensus 326 ~~~~I~~~~~dG~~~~~----l~~~~~~~P~glavD~~-----~~~lYwaD~~~~~I~~~~ldG~~~~--~~~~~~~~~~ 394 (841)
.++.|..+++++..... ...........|++.+. .+.+..+-...++|...++...... ...... .
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~---~ 257 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCE---K 257 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCC---S
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeec---C
Confidence 45566666665443211 01112334566777765 1345555556677888777654211 000000 0
Q ss_pred CC-ccccCCCCCCccccccceEEEEecCCCcEEEEccC-CceEEEEecCCCCCceeEE-EcCCCC-eEEEEecCCCCCeE
Q psy14257 395 DS-RVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS-GQFRRTLIAGDMESPRAIA-LDPRFG-LLFWTDWDSKAPRI 470 (841)
Q Consensus 395 ~~-~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~-G~~~~~l~~~~l~~P~gia-vd~~~g-~Ly~td~~~~~~~I 470 (841)
+. .+.........++|..+....+-...+.|.+.++. +......+........+|+ ..+..| .++.|-.. ...|
T Consensus 258 p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~--D~tv 335 (524)
T 2j04_B 258 PSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV--DGYF 335 (524)
T ss_dssp CSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET--TSEE
T ss_pred ceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc--CCeE
Confidence 00 00000011124566555566666777899999987 3332222333334567774 233445 66666544 4566
Q ss_pred EEecCCC-CCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCCe-eEEEEcCCCCCCcceEEEEe-
Q psy14257 471 ERCSMSG-EHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKD-HHVVLSNHDSLTHPFAIALF- 547 (841)
Q Consensus 471 ~r~~ldG-~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~~-~~~i~~~~~~l~~P~gla~~- 547 (841)
..-++.. .....+... ........+++.+.... +.+-...+.|...++.... ..++... .....+|++.
T Consensus 336 klWD~~~~~~~~~~~~~----~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~gH---~~~V~sva~Sp 407 (524)
T 2j04_B 336 YIFNPKDIATTKTTVSR----FRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVSR---ETTITAIGVSR 407 (524)
T ss_dssp EEECGGGHHHHCEEEEE----CSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEEC---SSCEEEEECCS
T ss_pred EEEECCCCCcccccccc----cccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccceeeecC---CCceEEEEeCC
Confidence 6666632 222233221 11112467888875444 5555555678877765433 2333322 1233556553
Q ss_pred cCeEEEEeCCCCeEE
Q psy14257 548 ENHVYWTDWRTNSVI 562 (841)
Q Consensus 548 ~~~lY~td~~~~~i~ 562 (841)
.+.++.+-...+.|.
T Consensus 408 ~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 408 LHPMVLAGSADGSLI 422 (524)
T ss_dssp SCCBCEEEETTTEEE
T ss_pred CCCeEEEEECCCEEE
Confidence 233334433344443
No 439
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=69.08 E-value=3.2 Score=42.49 Aligned_cols=34 Identities=32% Similarity=0.740 Sum_probs=30.6
Q ss_pred CCccCceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 179 ~~Cs~~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
..|.+.|.+. .+++.|.|.+||.+..+.+.|.+.
T Consensus 132 ~~c~~~C~n~--~g~~~C~C~~Gy~l~~d~~~C~~~ 165 (278)
T 3dem_A 132 LSCDHYCHNY--IGGYYCSCRFGYILHTDNRTCRVE 165 (278)
T ss_dssp CCCSSEEEEE--TTEEEEECCTTCEECTTSSCEECC
T ss_pred ccCCcCcCCc--cCCcEEEeCCcceeccCCCCCccc
Confidence 3799999999 999999999999999999998754
No 440
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=69.06 E-value=3.1 Score=29.69 Aligned_cols=25 Identities=32% Similarity=0.756 Sum_probs=16.9
Q ss_pred CCccC-ceeecCCCCceEEeecCCee
Q psy14257 179 GTCSQ-DCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 179 ~~Cs~-~C~~~~~~g~~~C~C~~G~~ 203 (841)
.+|.+ .|......++|.|.|++||.
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~Gyt 37 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGYT 37 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTCS
T ss_pred CCCCCCEeeccCCCCCEEEECCCCCc
Confidence 45544 56653113689999999996
No 441
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=68.89 E-value=1.6e+02 Score=33.26 Aligned_cols=119 Identities=20% Similarity=0.313 Sum_probs=65.0
Q ss_pred EEEEccCCceEEEEecCCCCCce-eEEEcCCCCeE--EEE-ecCC---------CCCeEEEecCCCCCcEEEEEecccCC
Q psy14257 425 IEVAKLSGQFRRTLIAGDMESPR-AIALDPRFGLL--FWT-DWDS---------KAPRIERCSMSGEHRSVIVRVDLLTS 491 (841)
Q Consensus 425 I~v~~~~G~~~~~l~~~~l~~P~-giavd~~~g~L--y~t-d~~~---------~~~~I~r~~ldG~~~~~i~~~~~~~~ 491 (841)
+.++.|||.....++..+..... -.|.|..++.| .|. +... .++.+..+++||-.+..|+.
T Consensus 274 ~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~------ 347 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIY------ 347 (620)
T ss_dssp EEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEE------
T ss_pred eeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEE------
Confidence 44667777755555544433222 23555555532 333 3211 23679999999988888876
Q ss_pred CCCCceeEEEeccCCEEEEEeCC--CCeEEEEEcCC--CeeEEEEcCCCCCCcceEEEEe---cCeEEEEeC
Q psy14257 492 RGAWPNGLTLDYQLTRIYWIDAK--SDSIHTVTYDG--KDHHVVLSNHDSLTHPFAIALF---ENHVYWTDW 556 (841)
Q Consensus 492 ~~~~P~glalD~~~~~LYw~d~~--~~~I~~~~~dG--~~~~~i~~~~~~l~~P~gla~~---~~~lY~td~ 556 (841)
-+.++|. ++.+.|+-.. .+.++..++|. ...+++.-... -..|.|++++ .+.++|.-.
T Consensus 348 -----Gs~~iD~-dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~-~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 348 -----GAMAVDH-DGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHED-ATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp -----TTEEECT-TSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCC-TTSSCSEEEEETTTCCEEEEEC
T ss_pred -----eeeEECC-CCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecC-CCCCCceEEEECCCCcEEEEec
Confidence 2268895 4555555432 34667766654 34444432211 2356677764 367777654
No 442
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=68.58 E-value=1.9e+02 Score=34.00 Aligned_cols=220 Identities=13% Similarity=0.059 Sum_probs=110.3
Q ss_pred CccceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc-----------CcCCCceEEEEcc-CCEEEE
Q psy14257 298 TAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK-----------NIQWPSSLVIDYN-QDILYW 365 (841)
Q Consensus 298 ~p~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~-----------~~~~P~glavD~~-~~~lYw 365 (841)
...+|+++|...++++..++ .+.|+|..-.|+.-+++... .......|++|+. .++||.
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~---------~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~ 92 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTD---------IGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYL 92 (763)
T ss_dssp CEEEEEECSSSTTCEEEEES---------SSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEE
T ss_pred ceeEEEeCCCCCCEEEEEec---------cCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEE
Confidence 45567777765444443332 24678777667655544331 2233567889984 578888
Q ss_pred EeCC------CCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc-cceEEEEecCCCcEEEEccCCceEEEE
Q psy14257 366 CDSH------LNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESNLDQIEVAKLSGQFRRTL 438 (841)
Q Consensus 366 aD~~------~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~~~~I~v~~~~G~~~~~l 438 (841)
+-.. ...|++-.=.|..-+.+......... ..+...-..++++.. .+.||.... .+.|++..-.|+.=+.+
T Consensus 93 ~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~-~~g~~~~~~l~v~p~~~~~v~a~~~-~~~l~~S~DgG~TW~~~ 170 (763)
T 3a0f_A 93 AQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGAN-DMGRNGGERLAVNPHWTDELWFGSR-TQGLWRSTDRAQTWSRM 170 (763)
T ss_dssp EECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTT-STTTTSBCCEEECTTSTTCEEEECS-SSCEEEESSTTSSCEEC
T ss_pred EecccccCCCCceEEEECCCCCCceeccCCcccCcc-ccCccccceEEECCCCCCEEEEEeC-CCcEEEECCCCcCcccc
Confidence 6532 35566544345444443311100000 000000011234333 256666532 34666655445433322
Q ss_pred ecC--C---CCCceeEEEcCCC-CeEEEEecCCCCCeEEEecCCCCCcEEEEEeccc----------------CCCCCCc
Q psy14257 439 IAG--D---MESPRAIALDPRF-GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLL----------------TSRGAWP 496 (841)
Q Consensus 439 ~~~--~---l~~P~giavd~~~-g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~----------------~~~~~~P 496 (841)
... . ......|++||.+ +.||+.... ...|++..=.|..-+.+...... ......|
T Consensus 171 ~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~--~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 248 (763)
T 3a0f_A 171 NQLPDSSTYGIGIISVIFDPKNVGTAYVASHA--VGGLWVTWDGGANWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLP 248 (763)
T ss_dssp TTSCCCSCTTTCEEEEEECSSSTTCEEEEESS--TTCEEEESSSSSSCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEE
T ss_pred ccCcccCCCccceEEEEECCCCCCEEEEEEeC--CCeEEEECCCCCCccccCCCccccccccccccccccccccCCCCcc
Confidence 210 0 0123568899865 478888764 22688887556665544210000 0011235
Q ss_pred eeEEEeccCCEEEEEe--------CCCCeEEEEEcCCCeeEEE
Q psy14257 497 NGLTLDYQLTRIYWID--------AKSDSIHTVTYDGKDHHVV 531 (841)
Q Consensus 497 ~glalD~~~~~LYw~d--------~~~~~I~~~~~dG~~~~~i 531 (841)
..+++++ .++||.+- ...+.|++.+-.|..-+.+
T Consensus 249 ~~~~~~~-~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~ 290 (763)
T 3a0f_A 249 IKIALGK-NGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHI 290 (763)
T ss_dssp EEEEECT-TSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEEC
T ss_pred eeEEECC-CCcEEEEeccCCCCCCCcceeEEEEeCCCCceEEC
Confidence 5677775 78899872 1345787776555544443
No 443
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=68.54 E-value=1.6e+02 Score=33.26 Aligned_cols=75 Identities=12% Similarity=-0.016 Sum_probs=45.2
Q ss_pred eeEEEeccCCEEEEEeC--------------------------------CCCeEEEEEcC-CCeeEEEEcCCCCCCcceE
Q psy14257 497 NGLTLDYQLTRIYWIDA--------------------------------KSDSIHTVTYD-GKDHHVVLSNHDSLTHPFA 543 (841)
Q Consensus 497 ~glalD~~~~~LYw~d~--------------------------------~~~~I~~~~~d-G~~~~~i~~~~~~l~~P~g 543 (841)
.++++|+..+.+|+... ..+.|..+|+. |+.+-.......... -.
T Consensus 415 ~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~--g~ 492 (582)
T 1flg_A 415 NPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWA--GV 492 (582)
T ss_dssp SCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCS--CC
T ss_pred CCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcc--cc
Confidence 36788988888887532 13567777775 443322222211111 12
Q ss_pred EEEecCeEEEEeCCCCeEEEEeccCCcceEE
Q psy14257 544 IALFENHVYWTDWRTNSVIRANKWNGSDVTL 574 (841)
Q Consensus 544 la~~~~~lY~td~~~~~i~~~~~~~g~~~~~ 574 (841)
++..++.||+.+. .+.++-++..+|+.+-.
T Consensus 493 ~~tagglvf~g~~-dg~l~A~D~~tG~~lW~ 522 (582)
T 1flg_A 493 LATAGNLVFTGTG-DGYFKAFDAKSGKELWK 522 (582)
T ss_dssp EEETTTEEEEECT-TSEEEEEETTTCCEEEE
T ss_pred eEeCCCEEEEECC-CCcEEEEECCCCCEEEE
Confidence 4556788888754 57888888888876543
No 444
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=68.30 E-value=1.1 Score=32.96 Aligned_cols=23 Identities=17% Similarity=0.580 Sum_probs=17.4
Q ss_pred Cccc----CCCCcEEecCCCceecCCCCccc
Q psy14257 144 DCYN----TPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 144 ~C~~----~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
.|.+ ..++|.|.|++||. |..|+
T Consensus 21 tC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 21 HCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp EEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred EEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 5665 35689999999997 55665
No 445
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=67.59 E-value=4.2 Score=28.72 Aligned_cols=18 Identities=39% Similarity=0.763 Sum_probs=14.8
Q ss_pred cee--ecCCCCceEEeecCCee
Q psy14257 184 DCE--PSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 184 ~C~--~~~~~g~~~C~C~~G~~ 203 (841)
.|. +. .++|.|.|++||.
T Consensus 16 ~C~~~~~--~~~~~C~C~~G~~ 35 (45)
T 1a3p_A 16 VXMHIES--LDSYTCNCVIGYS 35 (45)
T ss_dssp EEEECTT--TSSEEEECCTTEE
T ss_pred EEEeecC--CCCEEEEcCCCCc
Confidence 455 45 7899999999997
No 446
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=67.38 E-value=4.5 Score=39.75 Aligned_cols=87 Identities=24% Similarity=0.391 Sum_probs=49.0
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCcccc-------------ccccc--CCCCCC--CcccCCCCcEEecCCCceec
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFCD-------------EKQCL--RSDCHH--DCYNTPEGFMCVCPRDMYLQ 163 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C~-------------eC~~~--~~~C~~--~C~~~~g~~~C~C~~Gy~l~ 163 (841)
.|.+. +.|+. ..| .|.+||.+..|. .|... ...|+. .|.. ..|.|.+||...
T Consensus 97 ~Csg~-G~C~~--g~C----~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~ 165 (217)
T 2p28_B 97 LCHGK-GFLEC--GIC----RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPG 165 (217)
T ss_dssp TTTTS-EEEET--TEE----EECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTT
T ss_pred ccCCC-ceEEC--CEE----ECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCc
Confidence 46655 77764 455 788888766661 13211 124532 5653 489999995110
Q ss_pred --CCCCccc-cccccCCC--CCccC----ceeecCCCCceEEeecCCeee
Q psy14257 164 --PDLITCS-YLHPCEAW--GTCSQ----DCEPSVSNNSYKCTCHAGYEL 204 (841)
Q Consensus 164 --~d~~~C~-~~~eC~~~--~~Cs~----~C~~~~~~g~~~C~C~~G~~l 204 (841)
-.|..|+ +.++|... ..|+. .|.. .+|.|.+||..
T Consensus 166 ~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~------g~C~C~~G~~G 209 (217)
T 2p28_B 166 KLIYGQYCECDTINCERYNGQVCGGPGRGLCFC------GKCRCHPGFEG 209 (217)
T ss_dssp CCEESTTSCEESSCSCEETTEETTCTTTEEEET------TEEEECTTEES
T ss_pred ccEECCCcccCCccCCCCCCCCCCCCCCcEEeC------CeeECCCCCcc
Confidence 0266776 34566421 24542 3432 38999999973
No 447
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=66.30 E-value=1.1e+02 Score=30.42 Aligned_cols=146 Identities=8% Similarity=-0.037 Sum_probs=80.0
Q ss_pred ceEEEEecCCCcEEEEccCCce----EEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecc
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQF----RRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDL 488 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~----~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~ 488 (841)
+++.++-...+.|.+.++.... ..............++..+..+.++....+.....|...+...........
T Consensus 162 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~--- 238 (318)
T 4ggc_A 162 GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--- 238 (318)
T ss_dssp SSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE---
T ss_pred CCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccccc---
Confidence 4444454555667776654211 011111222345677888877766665544334566665655444433332
Q ss_pred cCCCCCCceeEEEeccCCEEEEEeC-CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEEEEec
Q psy14257 489 LTSRGAWPNGLTLDYQLTRIYWIDA-KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVIRANK 566 (841)
Q Consensus 489 ~~~~~~~P~glalD~~~~~LYw~d~-~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~~~~~ 566 (841)
.......+.+.+..+.++.+-. ..+.|...++........+..+ -..-..|++. ++.+.+|-...+.|...+.
T Consensus 239 ---~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH--~~~V~~l~~spdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 239 ---AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGH--TSRVLSLTMSPDGATVASAAADETLRLWRC 313 (318)
T ss_dssp ---CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCC--SSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ---ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCC--CCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 3345567788887888876643 4578888888654433333332 2234677774 4555556555566655544
No 448
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=65.04 E-value=4.1 Score=31.20 Aligned_cols=37 Identities=22% Similarity=0.530 Sum_probs=24.2
Q ss_pred ccCCCCCCCCCCccccccCCCCceeeeCCCCceeecCCCccc
Q psy14257 591 KKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632 (841)
Q Consensus 591 ~~n~C~~~ng~Cs~lC~~~~~~~~~C~Cp~g~~l~~d~~tC~ 632 (841)
..+||.. +|.|..+.-....+.|+|.||.||. +..|.
T Consensus 10 ~~~pC~n-gG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce 46 (63)
T 1hae_A 10 EKTFCVN-GGECFMVKDLSNPSRYLCKCQPGFT----GARCT 46 (63)
T ss_dssp HHTTSCT-TCEEEEEESSSSSCCEEEECCTTEE----STTSC
T ss_pred CCCcCCC-CcEEecCCccCCCCCEEEECCCCCc----CCccC
Confidence 3578875 3455443222344679999999996 77786
No 449
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=64.54 E-value=2.5 Score=39.43 Aligned_cols=34 Identities=18% Similarity=0.557 Sum_probs=24.8
Q ss_pred CCCC--CCcccCCCCcEEecCCCceecCCCCccccccccC
Q psy14257 139 SDCH--HDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCE 176 (841)
Q Consensus 139 ~~C~--~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~ 176 (841)
..|+ ..|.+..++|.|.|.+||. |..|+.+.+|.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c~ 160 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVDP 160 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB----SSSSCBC----
T ss_pred CcCCCCCeecccCCCceeeeCCCcc----cccccccccCc
Confidence 3564 3788889999999999997 66898888884
No 450
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=61.86 E-value=1.6e+02 Score=30.95 Aligned_cols=288 Identities=13% Similarity=0.034 Sum_probs=132.8
Q ss_pred eEEeccCcccccccccc--ccEEEEec--cccceeeeccccc-CCcceeEEEecCCC----eEEEEEecCCcccceEEEE
Q psy14257 222 FVIFSNRHELRGVDLRT--FNVIALIS--SLKNTIALDFYYT-PTANMVFWTDVIDD----KIYNATLIGNSLSNIDVVV 292 (841)
Q Consensus 222 ~ll~s~~~~I~~~~~~~--~~~~~l~~--~~~~~~avd~~~~-~~~~~lyw~d~~~~----~I~~~~~~~~~~~~~~~~~ 292 (841)
.|.+.....+.++..+. ..+..+.. ....+.+|.++.. .+. ||..- ..+ .|++. .++|. .-+.+.
T Consensus 24 ~l~vgt~~Gl~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~--l~~g~-~~g~~g~gl~~s-~D~G~--tW~~~~ 97 (394)
T 3b7f_A 24 MLLVATIKGAWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPER--MLMAA-RTGHLGPTVFRS-DDGGG--NWTEAT 97 (394)
T ss_dssp EEEEEETTEEEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTC--EEEEE-EC--CCEEEEEE-SSTTS--CCEECS
T ss_pred EEEEEecCceEEEECCCCCCCceECCccCCCCceEEEEECCCCCCe--EEEEe-cCCCCCccEEEe-CCCCC--CceECC
Confidence 34444455565555432 34444321 1234566666653 233 66543 233 67776 34443 112111
Q ss_pred e-CCC------------CCccceEEeee--cCceeEEEeeecCCCCCCCCCCEEEEccCCCcccccccc---C-------
Q psy14257 293 Q-TGL------------STAEGLAVDWI--GKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTK---N------- 347 (841)
Q Consensus 293 ~-~~l------------~~p~giavD~~--~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~---~------- 347 (841)
. .++ .....|++|+. .+.+|+. + ..+.|+|..-.|..-+.+... +
T Consensus 98 ~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g-~---------~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~ 167 (394)
T 3b7f_A 98 RPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG-T---------SPQGLFRSTDHGASWEPVAGFNDHPMRRAWTG 167 (394)
T ss_dssp BCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE-E---------ETTEEEEESSTTSBCEECHHHHTCTTHHHHHC
T ss_pred ccccCCCcccccccccccceeEEEeCCCCCCCEEEEE-e---------cCCcEEEEcCCCCCeEECcCccCCcccccccc
Confidence 1 011 12234777763 3556552 1 134788887777665544211 0
Q ss_pred ------c--CCCceEEEEcc-CCEEEEEeCCCCeEEEEEecCCccEEEEe-eeeecCCC---ccccCCCCCCcccccc-c
Q psy14257 348 ------I--QWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSERTVSFN-LEVLGSDS---RVGIPNCRPEDNLWIG-K 413 (841)
Q Consensus 348 ------~--~~P~glavD~~-~~~lYwaD~~~~~I~~~~ldG~~~~~~~~-~~~~~~~~---~~~i~~~~~~avdw~~-~ 413 (841)
. ..-..|++|+. .+.||+.... +.|++..-.|..-+.+.. ......+. ..+. .-..++++..+ +
T Consensus 168 ~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~-ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~-~~~~i~~~~~~~~ 245 (394)
T 3b7f_A 168 GEQDGTPDGPKMHSILVDPRDPKHLYIGMSS-GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGH-DPHCVVQHPAAPD 245 (394)
T ss_dssp CC----CCCCEEEEEEECTTCTTCEEEEEET-BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCB-CEEEEEECSSSTT
T ss_pred ccccCCCCCCceeEEEECCCCCCEEEEEECC-CCEEEECCCCCCceECCCCccccccCCCccccCc-ceeEEEECCCCCC
Confidence 0 01136888874 5778887543 346665444443333211 00000000 0000 00011223222 5
Q ss_pred eEEEEecCCCcEEEEccCCceEEEEecCCCC-----CceeEEEcCC-CCeEEEEecC----------CCCCeEEEecCCC
Q psy14257 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDME-----SPRAIALDPR-FGLLFWTDWD----------SKAPRIERCSMSG 477 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~-----~P~giavd~~-~g~Ly~td~~----------~~~~~I~r~~ldG 477 (841)
.||+... +.|++.+-.|..-+.+. ..+. ....|+++|. .+.||+.-.. .....|++..-.|
T Consensus 246 ~l~vg~~--~gl~~s~D~G~tW~~~~-~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG 322 (394)
T 3b7f_A 246 ILYQQNH--CGIYRMDRREGVWKRIG-DAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAG 322 (394)
T ss_dssp EEEEEET--TEEEEEETTTTEEECGG-GGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTT
T ss_pred EEEEEcC--CeEEEeCCCCCcceECC-CCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCC
Confidence 6666542 44666665565443332 2222 2356888874 4678876310 1135788776445
Q ss_pred CCcEEEEEecccCCCC---CCceeEEEeccC-CEEEEEeCCCCeEEEEEcCCCeeEEEE
Q psy14257 478 EHRSVIVRVDLLTSRG---AWPNGLTLDYQL-TRIYWIDAKSDSIHTVTYDGKDHHVVL 532 (841)
Q Consensus 478 ~~~~~i~~~~~~~~~~---~~P~glalD~~~-~~LYw~d~~~~~I~~~~~dG~~~~~i~ 532 (841)
..-+.+.. ++..... ....+|++|+.+ ++||+.. ..+.|++..-.|..-+.+.
T Consensus 323 ~tW~~~~~-glp~~~~~~~~~~~~~~~~p~~~~~l~~g~-~~g~l~~S~D~G~tW~~~~ 379 (394)
T 3b7f_A 323 ESWQRQDR-GLPTDQAWLTVKRQAMTADAHAPVGVYFGT-TGGEIWASADEGEHWQCIA 379 (394)
T ss_dssp SCCEEECB-TSCCSSCCCCCCTBSEEECCSSSCCEEEEC-TTSCEEEESSTTSBCEEEE
T ss_pred CCceECCC-CCCCccccceEEEEEEEECCCCCCEEEEEe-CCCeEEEECCCCCCceEcc
Confidence 55555432 1110000 012468898755 4677653 2456777665565555544
No 451
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=61.48 E-value=4.2 Score=45.99 Aligned_cols=24 Identities=21% Similarity=0.368 Sum_probs=12.9
Q ss_pred CeEecCCCCCCCCCCCCCCCCCcccccc
Q psy14257 107 RTCIPKALVCDGEPACFNGEDEMFCDEK 134 (841)
Q Consensus 107 ~~Ci~~~~~Cdg~~~C~~g~de~~C~eC 134 (841)
+.|.+....| .|.+|+.+..|++|
T Consensus 453 ~~Cd~~tg~C----~C~~g~~G~~Ce~C 476 (525)
T 4aqs_A 453 NPCDSETGYC----YCKRLVTGQRCDQC 476 (525)
T ss_dssp CCBCTTTCCB----CBCTTCCSTTTCC-
T ss_pred CcccCCCCEE----ECCCCCcCCCcccC
Confidence 3444444455 67777766656433
No 452
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=60.94 E-value=1.8 Score=47.01 Aligned_cols=35 Identities=37% Similarity=0.893 Sum_probs=0.0
Q ss_pred CCCCC--CcccCCCCcEEecCCCceecCCCCccccccccCCCCCc
Q psy14257 139 SDCHH--DCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTC 181 (841)
Q Consensus 139 ~~C~~--~C~~~~g~~~C~C~~Gy~l~~d~~~C~~~~eC~~~~~C 181 (841)
++|.+ .|.+.. +|.|++||. |..|+.- .|...+.|
T Consensus 371 ~~C~ngg~C~~~~---~C~C~~G~~----G~~Ce~c-~C~~~g~C 407 (426)
T 3zyj_B 371 LHCQNGGTCHNNV---RCLCPAAYT----GILCEKL-RCEEAGSC 407 (426)
T ss_dssp ---------------------------------------------
T ss_pred ccCCCCCCcCCCC---CCcCCCCCc----CCCCcCC-CCCCCCcc
Confidence 45643 677554 999999997 4557643 57656676
No 453
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=60.46 E-value=2.6e+02 Score=32.87 Aligned_cols=76 Identities=12% Similarity=0.027 Sum_probs=41.9
Q ss_pred ceeEEEcCCC--CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEecc-CCEEEEEeCCCCeEEEEE
Q psy14257 446 PRAIALDPRF--GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQ-LTRIYWIDAKSDSIHTVT 522 (841)
Q Consensus 446 P~giavd~~~--g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~-~~~LYw~d~~~~~I~~~~ 522 (841)
+..|+.+|.. ..||..........|+|..-.|..-+.+.. ....+..|.-|+.|+. .++||++-.+++ |...+
T Consensus 686 ~~~i~~~~~~~~~~~~~~g~~~~~~gv~~S~D~G~tW~~i~~---~~~~~~~~~~i~~d~~~~g~v~v~t~grG-i~~~~ 761 (789)
T 1sqj_A 686 KSDGKKASAPSAVFIWGTDKPGSDIGLYRSDDNGSTWTRVND---QEHNYSGPTMIEADPKVYGRVYLGTNGRG-IVYAD 761 (789)
T ss_dssp --------CCCCEEEEEESSTTSCSEEEEESSTTSSCEECCC---TTCCTTCEEEEEECTTSTTCEEEEEBSSC-EEEEE
T ss_pred ccccccCCCCCcCEEEEEEecCCcceEEEeCCCCccceeecC---CCcCcCccceeccCCccCCEEEEEcCCce-EEEec
Confidence 4445555442 256665321124689999877777665532 0123344667888875 589999887555 66666
Q ss_pred cCC
Q psy14257 523 YDG 525 (841)
Q Consensus 523 ~dG 525 (841)
+.|
T Consensus 762 ~~~ 764 (789)
T 1sqj_A 762 LTN 764 (789)
T ss_dssp CCC
T ss_pred cCC
Confidence 666
No 454
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=59.26 E-value=1.8e+02 Score=30.61 Aligned_cols=90 Identities=9% Similarity=0.001 Sum_probs=49.2
Q ss_pred CceEEEEecCCCEEEEEECCCCeEEEEEccc-Cc-eeeeeeeeeeeecccccccccccCceEEEEeeCCCCCcceeEEee
Q psy14257 670 SPNNLNFDAANKKIYWTDQEYNEVKRSSIVG-GQ-IQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDW 747 (841)
Q Consensus 670 ~~~~v~~d~~~~~iyw~d~~~~~I~~~~~~g-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~glAvD~ 747 (841)
.+..|+|++....|..... +.|+..++.. .. +..+-. . ..+...-........+.....+++.+
T Consensus 287 ~v~~~~~s~~g~~l~~~~~--~~v~iwd~~~~~~~~~~~~~-----------~-~~~~~~l~~~~~~~~i~~~~~~~~s~ 352 (447)
T 3dw8_B 287 SISDVKFSHSGRYMMTRDY--LSVKVWDLNMENRPVETYQV-----------H-EYLRSKLCSLYENDCIFDKFECCWNG 352 (447)
T ss_dssp CEEEEEECTTSSEEEEEES--SEEEEEETTCCSSCSCCEES-----------C-GGGTTTHHHHHHTSGGGCCCCEEECT
T ss_pred eEEEEEECCCCCEEEEeeC--CeEEEEeCCCCccccceeec-----------c-ccccccccccccccccccceEEEECC
Confidence 6789999998888876663 8999888864 22 000000 0 00000000000000111133488888
Q ss_pred cCCcEEEEecCCCCCeEEEEecCCcceEE
Q psy14257 748 IAQNMFIAVSSPTQSKIVVCNLEGEYQTT 776 (841)
Q Consensus 748 ~~~~LYw~~~~~~~~~I~v~~l~g~~~~~ 776 (841)
.++.|+.. ...++|.+.++.......
T Consensus 353 ~~~~l~s~---s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 353 SDSVVMTG---SYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp TSSEEEEE---CSTTEEEEEETTTCCEEE
T ss_pred CCCEEEEe---ccCCEEEEEEcCCCccee
Confidence 88777544 357899999998765433
No 455
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=59.01 E-value=3.4 Score=46.81 Aligned_cols=34 Identities=18% Similarity=0.444 Sum_probs=26.3
Q ss_pred ccccccCCCCCC--Cccc-CCCCcEEecC-CCceecCCCCcccc
Q psy14257 132 DEKQCLRSDCHH--DCYN-TPEGFMCVCP-RDMYLQPDLITCSY 171 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~-~~g~~~C~C~-~Gy~l~~d~~~C~~ 171 (841)
++|.. .+|.+ .|.+ ..++|.|.|+ .||. |+.|+.
T Consensus 3 d~C~~--~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 3 NPCCY--YPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp CGGGG--CCCCTTCEEEEETTTEEEEECTTSSEE----TTTTCE
T ss_pred CcCCC--CCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCCC
Confidence 45653 46764 7999 8899999999 9997 677864
No 456
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=58.67 E-value=2.6e+02 Score=32.26 Aligned_cols=56 Identities=11% Similarity=-0.082 Sum_probs=32.4
Q ss_pred CeEEEEEcCCCe-eEEEEcCCCCCCcce-EEEEecCeEEEEeCCCCeEEEEeccCCcceEEE
Q psy14257 516 DSIHTVTYDGKD-HHVVLSNHDSLTHPF-AIALFENHVYWTDWRTNSVIRANKWNGSDVTLI 575 (841)
Q Consensus 516 ~~I~~~~~dG~~-~~~i~~~~~~l~~P~-gla~~~~~lY~td~~~~~i~~~~~~~g~~~~~i 575 (841)
+.|..+|+.... +-.+-... .... .++..++.||... ..+.|+-++..+|+.+-.+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagglvf~gt-~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVT---IFNGGTLSTAGNLVFEGS-ADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESS---SCCCCEEEETTTEEEEEC-TTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCC---CccCccceECCCEEEEEC-CCCcEEEEECCCCccceee
Confidence 568888886433 32222211 1111 2344567788774 4678888888888866433
No 457
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=53.74 E-value=2.8e+02 Score=31.20 Aligned_cols=73 Identities=14% Similarity=0.130 Sum_probs=55.2
Q ss_pred CCceeEEEeccCCEEEEEeCCCCeEEEEEcCC----------CeeEEEEcCCCCCCcceEEEEe-cCeEEEEeCCCCeEE
Q psy14257 494 AWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDG----------KDHHVVLSNHDSLTHPFAIALF-ENHVYWTDWRTNSVI 562 (841)
Q Consensus 494 ~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG----------~~~~~i~~~~~~l~~P~gla~~-~~~lY~td~~~~~i~ 562 (841)
+.|.|+-++++++.+|++.-...++.+++++. ..+.+++...+.-..|.-.+++ .|+.|.|-.-...|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 67999999999999999998889999998862 1222233332223468888885 489999998888898
Q ss_pred EEec
Q psy14257 563 RANK 566 (841)
Q Consensus 563 ~~~~ 566 (841)
+.|.
T Consensus 403 kWni 406 (638)
T 3sbq_A 403 KWNM 406 (638)
T ss_dssp EEEH
T ss_pred EEec
Confidence 8874
No 458
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=51.38 E-value=2.2e+02 Score=29.25 Aligned_cols=61 Identities=15% Similarity=0.017 Sum_probs=39.5
Q ss_pred ceEEEEecCCCc-EEEEccC-CceEEEEecC-CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC
Q psy14257 413 KNLYWVESNLDQ-IEVAKLS-GQFRRTLIAG-DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS 476 (841)
Q Consensus 413 ~~LY~tD~~~~~-I~v~~~~-G~~~~~l~~~-~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld 476 (841)
+++..+-...+. |.+.++. |+...++... .......++++|...+|..... .+.|...++.
T Consensus 207 g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~---d~~v~iw~~~ 270 (355)
T 3vu4_A 207 SDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD---KWTLHVFEIF 270 (355)
T ss_dssp SSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET---TCEEEEEESS
T ss_pred CCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC---CCEEEEEEcc
Confidence 566666667777 9999986 5555555422 4456789999998666655543 3455555553
No 459
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=50.81 E-value=2.1e+02 Score=28.78 Aligned_cols=80 Identities=8% Similarity=-0.002 Sum_probs=47.9
Q ss_pred CCCCcceeEEeecC---CcEEEEecCCCCCeEEEEecCCc----c-eEEEEcCCCCCCCcCCCceEEEEeCCCCeEEEEe
Q psy14257 736 GISHPSGLAIDWIA---QNMFIAVSSPTQSKIVVCNLEGE----Y-QTTILSNESNDTSTLSKISSIAVWPVKGKMFWSN 807 (841)
Q Consensus 736 ~~~~p~glAvD~~~---~~LYw~~~~~~~~~I~v~~l~g~----~-~~~~~~~~~~~~~~l~~p~~iavd~~~g~lyw~d 807 (841)
.-..+.+|++.+.+ ..+..+- ...++|.+.+++.. . ...+..- -....+++..|...+|.-..
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~--s~D~~v~iw~~~~~~~~~~~~~~~~~~-------~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASC--SQDGRVFIWTCDDASSNTWSPKLLHKF-------NDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEE--ETTCEEEEEECSSTTCCCCBCCEEEEC-------SSCEEEEEECTTTCCEEEEE
T ss_pred CCCceEEEEecCCCCCCCceEEEE--cCCCeEEEEEccCccccchhhhhhhcC-------CCcEEEEEEcCCCCEEEEEc
Confidence 44567788887765 2455552 35688999998752 1 1223222 24678999999866665544
Q ss_pred cCCCcceEEEEecCCCce
Q psy14257 808 VTKQVVTIEMAFMDGTKR 825 (841)
Q Consensus 808 ~~~~~~~I~~~~~dG~~~ 825 (841)
.... -+|.....+|.-+
T Consensus 282 ~D~~-v~lw~~~~~g~~~ 298 (316)
T 3bg1_A 282 GDNK-VTLWKESVDGQWV 298 (316)
T ss_dssp SSSC-EEEEEECTTSCEE
T ss_pred CCCe-EEEEEECCCCcEE
Confidence 3332 4666666666533
No 460
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=50.22 E-value=7.1 Score=41.75 Aligned_cols=35 Identities=17% Similarity=0.462 Sum_probs=16.2
Q ss_pred CCCCCCCcccCCCCCCCccccCCCCCCCCCCccCCCC
Q psy14257 51 ACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGN 87 (841)
Q Consensus 51 ~Cdg~~dC~~~d~sde~~C~~dC~~~~de~~C~~c~~ 87 (841)
.|+|+.++-..+.....-| .|..+.....|..|.+
T Consensus 256 ~Cngh~s~c~~~~~~~~~C--~C~~nt~G~~Ce~C~~ 290 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMC--NCKHNTYGVDCEKCLP 290 (375)
T ss_dssp CCTTSCSCEEECTTSCEEE--CCCTTEESTTSCEECT
T ss_pred cCCCCCcccCCCCCCCeee--eCcCCCcCCCcccCCC
Confidence 4777766541111111112 4555555556665433
No 461
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=47.85 E-value=3.2e+02 Score=30.17 Aligned_cols=147 Identities=5% Similarity=-0.087 Sum_probs=74.4
Q ss_pred eEEEEecCCCcEEEEccCCceEE-----------EEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcE
Q psy14257 414 NLYWVESNLDQIEVAKLSGQFRR-----------TLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRS 481 (841)
Q Consensus 414 ~LY~tD~~~~~I~v~~~~G~~~~-----------~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~ 481 (841)
.+..+-...+.|.+.++...... ..+...-.....+++.+. +.|..... .+.|..-++. +....
T Consensus 226 ~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~---DgtV~lWD~~~~~~~~ 301 (524)
T 2j04_B 226 GCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFK---NGFVAEFDLTDPEVPS 301 (524)
T ss_dssp CEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEET---TSEEEEEETTBCSSCS
T ss_pred ceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeC---CCEEEEEECCCCCCce
Confidence 45555566678888887643110 012222245677888764 55554443 4677777776 32222
Q ss_pred EEEEecccCCCCCCceeEEEe-ccCC-EEEEEeCCCCeEEEEEcCCC-eeEEEEcCCCCCCcceEEEEec-CeEEEEeCC
Q psy14257 482 VIVRVDLLTSRGAWPNGLTLD-YQLT-RIYWIDAKSDSIHTVTYDGK-DHHVVLSNHDSLTHPFAIALFE-NHVYWTDWR 557 (841)
Q Consensus 482 ~i~~~~~~~~~~~~P~glalD-~~~~-~LYw~d~~~~~I~~~~~dG~-~~~~i~~~~~~l~~P~gla~~~-~~lY~td~~ 557 (841)
.... ..-.....|++. ...+ +++.+-...+.|...++... ...++.... .......|++.. +..+++-..
T Consensus 302 ~~~~-----~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~-~~~~v~~v~fsp~~~~l~s~~~ 375 (524)
T 2j04_B 302 FYDQ-----VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF-RGSNLVPVVYCPQIYSYIYSDG 375 (524)
T ss_dssp EEEE-----CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC-SCCSCCCEEEETTTTEEEEECS
T ss_pred EEee-----cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc-ccCcccceEeCCCcCeEEEeCC
Confidence 2222 222344666422 2334 67777666778888887542 222222111 011234566643 555555545
Q ss_pred CCeEEEEeccCCc
Q psy14257 558 TNSVIRANKWNGS 570 (841)
Q Consensus 558 ~~~i~~~~~~~g~ 570 (841)
.+.|.-.+..++.
T Consensus 376 d~tv~lwd~~~~~ 388 (524)
T 2j04_B 376 ASSLRAVPSRAAF 388 (524)
T ss_dssp SSEEEEEETTCTT
T ss_pred CCcEEEEECcccc
Confidence 5556555554444
No 462
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=47.36 E-value=3.5e+02 Score=30.45 Aligned_cols=81 Identities=19% Similarity=0.229 Sum_probs=48.9
Q ss_pred CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC--CcEEEEEecccCCCCCCceeE
Q psy14257 422 LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE--HRSVIVRVDLLTSRGAWPNGL 499 (841)
Q Consensus 422 ~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~--~~~~i~~~~~~~~~~~~P~gl 499 (841)
++.+.++++||..+..++... .++|.. |.+.|+-.-.....+...++|.. ..+++.-. +.-..|.|.
T Consensus 329 ~H~~svaDVDGDG~dEIv~Gs------~~iD~d-G~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~----E~~~~~~G~ 397 (620)
T 2zuy_A 329 NHSLSVADVDGDGKDEIIYGA------MAVDHD-GTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVH----EDATKPYGL 397 (620)
T ss_dssp CSSCEEECCSSSSSCEEEETT------EEECTT-SSEEEECSCCCCSCEEEECSCTTSSSCEEEEEC----CCTTSSCSE
T ss_pred CcCceEEecCCCCceeEEEee------eEECCC-CCEEeecCCCCCceeEEEecCCCCCCCEEEEEe----cCCCCCCce
Confidence 477888999886655555432 578865 55555532212446788888754 55665542 222345666
Q ss_pred E-EeccCCEEEEEeC
Q psy14257 500 T-LDYQLTRIYWIDA 513 (841)
Q Consensus 500 a-lD~~~~~LYw~d~ 513 (841)
+ .|...+.++|.-.
T Consensus 398 ~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 398 SLRDAGTGEILWGVH 412 (620)
T ss_dssp EEEETTTCCEEEEEC
T ss_pred EEEECCCCcEEEEec
Confidence 5 4777888888653
No 463
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=47.20 E-value=4.9 Score=30.27 Aligned_cols=20 Identities=20% Similarity=0.519 Sum_probs=14.9
Q ss_pred CCCCcEEecCCCceecCCCCcccc
Q psy14257 148 TPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 148 ~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
..++|.|.|++||. |..|+.
T Consensus 29 ~~~~~~C~C~~Gf~----G~~Ce~ 48 (58)
T 3ltf_D 29 DLPVYSCECAIGFM----GQRCEY 48 (58)
T ss_dssp TEEEEEEEECTTEE----SSSSCE
T ss_pred CCCCEEeECCCCCc----cCCCcc
Confidence 34578999999997 566654
No 464
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=46.59 E-value=4e+02 Score=30.82 Aligned_cols=173 Identities=12% Similarity=0.122 Sum_probs=0.0
Q ss_pred EEEEeCCCCeEEEEEe-------cCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecCCCcEEEEccC----
Q psy14257 363 LYWCDSHLNTVESVRV-------DGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLS---- 431 (841)
Q Consensus 363 lYwaD~~~~~I~~~~l-------dG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~~~~I~v~~~~---- 431 (841)
||..|...+++..+.. .......+.... +.-.|.-+..+-+.+++.+
T Consensus 394 L~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~----------------------~g~lWigT~~~Gl~~~~~~~~~~ 451 (758)
T 3ott_A 394 INRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDT----------------------AGQLWISTCLGGIFVVDKHKLMQ 451 (758)
T ss_dssp EEEEETTTTEEEEEEEECCC--CBSSSEEEEEECT----------------------TSEEEEEESSSCEEEEEHHHHHH
T ss_pred HhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcC----------------------CCCEEEEECCCceEEEccccccc
Q ss_pred ---Cce---EEEEecCCCCC--ceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCC---CceeEE
Q psy14257 432 ---GQF---RRTLIAGDMES--PRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGA---WPNGLT 500 (841)
Q Consensus 432 ---G~~---~~~l~~~~l~~--P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~---~P~gla 500 (841)
+.. ...-...++.. .+.|..|.. |.|++.... ...|.+.+......+.+.. ..+. .+..+.
T Consensus 452 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWi~~~t--~~Gl~~~d~~~~~~~~~~~-----~~~~~~~~~~~i~ 523 (758)
T 3ott_A 452 STSGQYIAEQNYSVHNGLSGMFINQIIPDNE-GNVWVLLYN--NKGIDKINPRTREVTKLFA-----DELTGEKSPNYLL 523 (758)
T ss_dssp CCSSEEECSEEECGGGTCSCSCEEEEEECTT-SCEEEEETT--CSSEEEEETTTTEEEEECT-----TTSCGGGCEEEEE
T ss_pred cCCcceecccccccccccccceeeeEEEcCC-CCEEEEccC--CCCcEEEeCCCCceEEecC-----CCcCCCcccceEE
Q ss_pred EeccCCEEEEEeCCCCeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCc
Q psy14257 501 LDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 501 lD~~~~~LYw~d~~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
.| ..++|+++. .+.|.++++.....+.+...........+|...++.||++- .+.|.++++.+.+
T Consensus 524 ~d-~~g~lWigt--~~Gl~~~~~~~~~~~~~~~~gl~~~~i~~i~~~~g~lWi~t--~~Gl~~~~~~~~~ 588 (758)
T 3ott_A 524 CD-EDGLLWVGF--HGGVMRINPKDESQQSISFGSFSNNEILSMTCVKNSIWVST--TNGLWIIDRKTMD 588 (758)
T ss_dssp EC-TTSCEEEEE--TTEEEEECC--CCCCBCCCCC---CCEEEEEEETTEEEEEE--SSCEEEEETTTCC
T ss_pred EC-CCCCEEEEe--cCceEEEecCCCceEEecccCCCccceEEEEECCCCEEEEC--CCCeEEEcCCCce
No 465
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=46.38 E-value=2.5e+02 Score=28.44 Aligned_cols=114 Identities=6% Similarity=0.005 Sum_probs=62.2
Q ss_pred CCceeEEEcC--CCCeEEEEecCCCCCeEEEecCCCCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEE
Q psy14257 444 ESPRAIALDP--RFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTV 521 (841)
Q Consensus 444 ~~P~giavd~--~~g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~ 521 (841)
.....|+++| .+.+|..... .+.|...++.......+... ..-.....+++.+. +.++.+-...+.|...
T Consensus 126 ~~v~~~~~~~~~~~~~l~s~s~---dg~i~~wd~~~~~~~~~~~~----~~~~~i~~~~~~pd-g~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 126 NEIIYMYGHNEVNTEYFIWADN---RGTIGFQSYEDDSQYIVHSA----KSDVEYSSGVLHKD-SLLLALYSPDGILDVY 197 (343)
T ss_dssp SCEEEEECCC---CCEEEEEET---TCCEEEEESSSSCEEEEECC----CSSCCCCEEEECTT-SCEEEEECTTSCEEEE
T ss_pred CCEEEEEcCCCCCCCEEEEEeC---CCcEEEEECCCCcEEEEEec----CCCCceEEEEECCC-CCEEEEEcCCCEEEEE
Confidence 4578899998 6555544443 46777777764444333221 12224678999875 4555554557889999
Q ss_pred EcCCCeeE-EEEcC-CCCCCcceEEEEec-C-eEEEEeCCCCeEEEEeccCC
Q psy14257 522 TYDGKDHH-VVLSN-HDSLTHPFAIALFE-N-HVYWTDWRTNSVIRANKWNG 569 (841)
Q Consensus 522 ~~dG~~~~-~i~~~-~~~l~~P~gla~~~-~-~lY~td~~~~~i~~~~~~~g 569 (841)
++...... ..+.. + -.....|++.. + +|..+. .+.|...+..++
T Consensus 198 d~~~~~~~~~~~~~~h--~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~ 245 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDE--EAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKD 245 (343)
T ss_dssp ESSCTTSCCEECCCCT--TSCEEEEEECTTSSEEEEEE--SSBEEEEETTSS
T ss_pred ECCCCCCCccEEeccC--CCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCC
Confidence 98765433 22222 1 23345677643 3 344433 236655554433
No 466
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=44.72 E-value=3.8e+02 Score=30.15 Aligned_cols=115 Identities=11% Similarity=0.119 Sum_probs=68.2
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCCCCCc-------EEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCe
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR-------SVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDS 517 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~-------~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~ 517 (841)
...+++++|++.+|+..... +.|..-++.+... ...+.... .....+...+++.+. + +.+-...+.
T Consensus 131 sv~svafSPDG~~LAsgs~D---GtVkIWd~~~~~l~~~~~i~l~ti~~~~-~gh~~~V~sVawSPd-g--Laass~D~t 203 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNED---GELQFFSIRKNSENTPEFYFESSIRLSD-AGSKDWVTHIVWYED-V--LVAALSNNS 203 (588)
T ss_dssp CEEEEEECSSSSCEEEEETT---SEEEEEECCCCTTTCCCCEEEEEEECSC-TTCCCCEEEEEEETT-E--EEEEETTCC
T ss_pred cEEEEEEcCCCCEEEEEcCC---CEEEEEECCCCccccccceeeeeeeccc-ccccccEEEEEEcCC-c--EEEEeCCCe
Confidence 36789999998888888753 6677777765532 11111000 012357788888864 4 455555788
Q ss_pred EEEEEcCCCee----EEEEcCCCCCCcceEEEEecCeEEEEeCCCCeEEEEeccCCc
Q psy14257 518 IHTVTYDGKDH----HVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGS 570 (841)
Q Consensus 518 I~~~~~dG~~~----~~i~~~~~~l~~P~gla~~~~~lY~td~~~~~i~~~~~~~g~ 570 (841)
|+..++++... +++...+ -....++++.+..|-.+- .+.|.-.+..++.
T Consensus 204 VrlWd~~~~~~~~~~~tL~~~h--~~~V~svaFsg~~LASa~--~~tIkLWd~~~~~ 256 (588)
T 2j04_A 204 VFSMTVSASSHQPVSRMIQNAS--RRKITDLKIVDYKVVLTC--PGYVHKIDLKNYS 256 (588)
T ss_dssp EEEECCCSSSSCCCEEEEECCC--SSCCCCEEEETTEEEEEC--SSEEEEEETTTTE
T ss_pred EEEEECCCCccccceeeecccc--cCcEEEEEEECCEEEEEe--CCeEEEEECCCCe
Confidence 99899888663 2332222 123466776644554443 4677777755444
No 467
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=43.57 E-value=4.4e+02 Score=30.51 Aligned_cols=261 Identities=16% Similarity=0.103 Sum_probs=127.9
Q ss_pred ceeeecccccCCcceeEEEecCCCeEEEEEecCCcccceEEEEeCCC-------CCccceEEeee-cCceeEEEeeecCC
Q psy14257 250 NTIALDFYYTPTANMVFWTDVIDDKIYNATLIGNSLSNIDVVVQTGL-------STAEGLAVDWI-GKNLYMFWAFWSLS 321 (841)
Q Consensus 250 ~~~avd~~~~~~~~~lyw~d~~~~~I~~~~~~~~~~~~~~~~~~~~l-------~~p~giavD~~-~~~~y~~~td~~~~ 321 (841)
.+.+|.++..+.. .||. -...+.|+|.. ++|. .-+. +...+ .....|++|+. .+.+|+....+...
T Consensus 24 ~i~~i~~~p~~~~-~~~~-~~~~ggv~rS~-D~G~--tW~~-i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~ 97 (737)
T 2cn3_A 24 FMPGIVFNETEKD-LIYA-RAAIGGAYRWD-PSTE--TWIP-LLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND 97 (737)
T ss_dssp CCCEEEECSSSTT-CEEE-ECSSSCEEEEE-TTTT--EEEE-CCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS
T ss_pred eeeEEEECCCCCC-EEEE-EecCCcEEEeC-CCCC--CEEE-CcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc
Confidence 5667777765433 2554 44456788874 4443 2222 22211 23457899984 34666654332210
Q ss_pred CCCCCCCCEEEEccCCCcccccccc-CcC-------CCceEEEEccC-CEEEEEeCCCCeEEEEEecCCccEEEEeeeee
Q psy14257 322 PSNSSDGGIEKAGMHGENRSPLVTK-NIQ-------WPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSERTVSFNLEVL 392 (841)
Q Consensus 322 ~~~~~~~~I~~~~~dG~~~~~l~~~-~~~-------~P~glavD~~~-~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~ 392 (841)
.......|+|..-.|+.-+.+... .+. ....|++|+.+ +.||........|++-.=.|..-+.+..+...
T Consensus 98 -~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~S~DgG~tW~~~~~~~~~ 176 (737)
T 2cn3_A 98 -WLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWRSTDYGVTWSKVESFPNP 176 (737)
T ss_dssp -SSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEEESSTTSSCEECTTCCCC
T ss_pred -cccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEEeCCCCcceecccCCCCC
Confidence 011235788887777766655322 110 12579999865 67777653324566543334333333211100
Q ss_pred c----CCC------ccccCCCCCCcccccc-------ceEEEEecCC-CcEEEEccCCceEEEEecCCC---CCceeEEE
Q psy14257 393 G----SDS------RVGIPNCRPEDNLWIG-------KNLYWVESNL-DQIEVAKLSGQFRRTLIAGDM---ESPRAIAL 451 (841)
Q Consensus 393 ~----~~~------~~~i~~~~~~avdw~~-------~~LY~tD~~~-~~I~v~~~~G~~~~~l~~~~l---~~P~giav 451 (841)
+ .+. ..|+ .-+++|..+ +.||+.-... ..|++..-.|..-+.+ . .+ ..|..+++
T Consensus 177 ~~~~~~p~~~~~~~~~g~---~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~-~-~~p~~~~~~~~~~ 251 (737)
T 2cn3_A 177 GTYIYDPNFDYTKDIIGV---VWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAV-P-GQPKGLLPHHGVL 251 (737)
T ss_dssp CCCBSCTTSTTTCSBCCE---EEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEEC-T-TCCCSSEEEEEEE
T ss_pred cccccCcccccccCCCCE---EEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEEC-C-CCCCcccceEEEE
Confidence 0 000 0000 001222222 3788765332 2465554334433222 2 21 12455778
Q ss_pred cCCCCeEEEEecC-------CCCCeEEEecCCCCCcEEEEEecccCCC-CCCc---eeEEEeccC-CEEEEEeCC----C
Q psy14257 452 DPRFGLLFWTDWD-------SKAPRIERCSMSGEHRSVIVRVDLLTSR-GAWP---NGLTLDYQL-TRIYWIDAK----S 515 (841)
Q Consensus 452 d~~~g~Ly~td~~-------~~~~~I~r~~ldG~~~~~i~~~~~~~~~-~~~P---~glalD~~~-~~LYw~d~~----~ 515 (841)
+| .+.||++-.. .....|+|.+-.|...+.+... +.. ...+ .+|++|+.+ ++||++... .
T Consensus 252 ~~-~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~---~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~~~~~~ 327 (737)
T 2cn3_A 252 AS-NGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPI---PYSSSDNRFCFAGLAVDRQNPDIIMVTSMNAWWPD 327 (737)
T ss_dssp CT-TSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSS---CTTSTTCCSEEEEEEECTTCTTCEEEEEECCCSSC
T ss_pred CC-CCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCC---CCCCcccccccccEEEcCCCCCEEEEEecccCCCC
Confidence 87 5788886421 1246799988777666554321 000 0111 358898765 688887643 1
Q ss_pred CeEEEEEcCCC
Q psy14257 516 DSIHTVTYDGK 526 (841)
Q Consensus 516 ~~I~~~~~dG~ 526 (841)
..|++..=.|.
T Consensus 328 ~~l~~S~DgG~ 338 (737)
T 2cn3_A 328 EYIFRSTDGGA 338 (737)
T ss_dssp CCEEEESSTTS
T ss_pred ccEEEeCCCCc
Confidence 34666543343
No 468
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=43.17 E-value=14 Score=27.17 Aligned_cols=18 Identities=33% Similarity=0.840 Sum_probs=14.5
Q ss_pred CCceEEeecCCeeecCCCCceE
Q psy14257 191 NNSYKCTCHAGYELEPDMFTCK 212 (841)
Q Consensus 191 ~g~~~C~C~~G~~l~~d~~~C~ 212 (841)
.++|.|.|++||. +..|.
T Consensus 26 ~~~~~C~C~~Gyt----G~~Ce 43 (53)
T 1nql_B 26 LDKYACNCVVGYI----GERCQ 43 (53)
T ss_dssp TTEEEEEECTTEE----STTSC
T ss_pred CCCEEEecCCCCc----CCCCC
Confidence 6789999999997 44564
No 469
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=43.17 E-value=4.5e+02 Score=30.46 Aligned_cols=196 Identities=15% Similarity=0.102 Sum_probs=94.0
Q ss_pred CCceEEEEccC-CEEEEEeCCCCeEEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccc-cceEEEEecC------
Q psy14257 350 WPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWI-GKNLYWVESN------ 421 (841)
Q Consensus 350 ~P~glavD~~~-~~lYwaD~~~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~-~~~LY~tD~~------ 421 (841)
+..+|++++.+ +.||+ -...+.|+|.+-.|..-+.+........-...++ ..+++|.. .+.||++-..
T Consensus 24 ~i~~i~~~p~~~~~~~~-~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i---~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYA-RAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGV---ESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEE-ECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCE---EEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEE-EecCCcEEEeCCCCCCEEECcCccCcccccCCCc---ceEEeCCCCCCEEEEEecccccccc
Confidence 66789999876 45555 4455678887666654444321000000000001 11234432 3678876421
Q ss_pred --CCcEEEEccCCceEEEEecC-CC--C-----CceeEEEcCCC-CeEEEEecCCCCCeEEEecCCCCCcEEEEEecccC
Q psy14257 422 --LDQIEVAKLSGQFRRTLIAG-DM--E-----SPRAIALDPRF-GLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLT 490 (841)
Q Consensus 422 --~~~I~v~~~~G~~~~~l~~~-~l--~-----~P~giavd~~~-g~Ly~td~~~~~~~I~r~~ldG~~~~~i~~~~~~~ 490 (841)
...|++..-.|+.-+.+... .+ . ....|++||.+ +.||..... ...|+|..=.|..-+.+... ..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~--g~gl~~S~DgG~tW~~~~~~--~~ 175 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC--GNGLWRSTDYGVTWSKVESF--PN 175 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST--TCCEEEESSTTSSCEECTTC--CC
T ss_pred cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc--CCcEEEeCCCCcceecccCC--CC
Confidence 24566665556543322211 11 0 12579999875 677776521 25788877556555543210 00
Q ss_pred CCCC--C-----------ceeEEEeccC-------CEEEEEeCCC-CeEEEEEcCCCeeEEEEcCCCCCCcceEEEEe-c
Q psy14257 491 SRGA--W-----------PNGLTLDYQL-------TRIYWIDAKS-DSIHTVTYDGKDHHVVLSNHDSLTHPFAIALF-E 548 (841)
Q Consensus 491 ~~~~--~-----------P~glalD~~~-------~~LYw~d~~~-~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~-~ 548 (841)
..+. . -..+++|+.+ ++||++-... ..|++. .||...-..+.....-..|.-+++. .
T Consensus 176 ~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S-~DgG~tW~~~~~~p~~~~~~~~~~~~~ 254 (737)
T 2cn3_A 176 PGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRS-TDGGVTWKAVPGQPKGLLPHHGVLASN 254 (737)
T ss_dssp CCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEE-SSTTSCCEECTTCCCSSEEEEEEECTT
T ss_pred CcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEE-cCCCCceEECCCCCCcccceEEEECCC
Confidence 0000 1 1237788654 4899876433 356665 4543322222221111123334443 5
Q ss_pred CeEEEE
Q psy14257 549 NHVYWT 554 (841)
Q Consensus 549 ~~lY~t 554 (841)
+.||++
T Consensus 255 ~~l~~~ 260 (737)
T 2cn3_A 255 GMLYIT 260 (737)
T ss_dssp SEEEEE
T ss_pred CeEEEE
Confidence 677765
No 470
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=41.87 E-value=8.8 Score=43.61 Aligned_cols=34 Identities=18% Similarity=0.587 Sum_probs=24.4
Q ss_pred ccccccCCCCCC--Cccc-CCCCcEEecC-CCceecCCCCcccc
Q psy14257 132 DEKQCLRSDCHH--DCYN-TPEGFMCVCP-RDMYLQPDLITCSY 171 (841)
Q Consensus 132 ~eC~~~~~~C~~--~C~~-~~g~~~C~C~-~Gy~l~~d~~~C~~ 171 (841)
++|. ..+|.+ .|.+ ..++|.|.|+ +||. |+.|+.
T Consensus 2 d~C~--s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 2 NPCC--SNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CTTT--TCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCC--CCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 3455 336754 7885 4589999999 9996 677864
No 471
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.79 E-value=3e+02 Score=28.09 Aligned_cols=125 Identities=6% Similarity=-0.094 Sum_probs=60.2
Q ss_pred CcEEEEccCCceEEEEecCCCCC-c-eeEEEcCCCCeEEEEec----CCCCCeEEEecCCCCCcEEEEEecccCCCCCCc
Q psy14257 423 DQIEVAKLSGQFRRTLIAGDMES-P-RAIALDPRFGLLFWTDW----DSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWP 496 (841)
Q Consensus 423 ~~I~v~~~~G~~~~~l~~~~l~~-P-~giavd~~~g~Ly~td~----~~~~~~I~r~~ldG~~~~~i~~~~~~~~~~~~P 496 (841)
..++++++....-+.+....... - .++++ .++.||+.-. +.....+++.++|-...+.... ..+..|
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~--~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~-----~~~~~~ 240 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN--KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKL-----APVSSP 240 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE--ETTEEEEECCEEETTEECCCEEEEECC---CEEEEC-----CCSSTT
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE--ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEec-----CCCCCC
Confidence 57888998765544443211111 1 23344 3578888631 1113567777775333222211 122223
Q ss_pred e---eEEEeccCCEEEEEeCCC----------------------CeEEEEEcCCCeeEEEEcCCCCCCcceEEEEecCeE
Q psy14257 497 N---GLTLDYQLTRIYWIDAKS----------------------DSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHV 551 (841)
Q Consensus 497 ~---glalD~~~~~LYw~d~~~----------------------~~I~~~~~dG~~~~~i~~~~~~l~~P~gla~~~~~l 551 (841)
. +.++-..+++||+.-... ..+++++++...-+.+....... .-.+.++.+++|
T Consensus 241 ~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~~~~~i 319 (357)
T 2uvk_A 241 DGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR-AYGVSLPWNNSL 319 (357)
T ss_dssp TCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC-BSSEEEEETTEE
T ss_pred cccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc-ccceeEEeCCEE
Confidence 2 211222468999875421 25788888865544443321111 113456678888
Q ss_pred EEEe
Q psy14257 552 YWTD 555 (841)
Q Consensus 552 Y~td 555 (841)
|+.=
T Consensus 320 ~v~G 323 (357)
T 2uvk_A 320 LIIG 323 (357)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8864
No 472
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=40.65 E-value=31 Score=38.78 Aligned_cols=52 Identities=25% Similarity=0.526 Sum_probs=29.5
Q ss_pred CcccCCCCcEE-ecCCCceecCCCCcccccccc-----CCCCCccC--ceeecCCCCceEEeecCCee
Q psy14257 144 DCYNTPEGFMC-VCPRDMYLQPDLITCSYLHPC-----EAWGTCSQ--DCEPSVSNNSYKCTCHAGYE 203 (841)
Q Consensus 144 ~C~~~~g~~~C-~C~~Gy~l~~d~~~C~~~~eC-----~~~~~Cs~--~C~~~~~~g~~~C~C~~G~~ 203 (841)
.|.....+..| .|++||.. ..|.....| ...+.|.. .|. ..++.|.|.+||.
T Consensus 410 ~C~~g~~G~~C~~C~~Gy~G----~~c~~~~~C~~C~C~~~gtc~~~~~Cd----~~tg~C~C~~g~~ 469 (525)
T 4aqs_A 410 RCKLHVEGERCDVCKEGFYD----LSAEDPYGCKSCACNPLGTIPGGNPCD----SETGYCYCKRLVT 469 (525)
T ss_dssp CBCTTEETTTTCEECTTEEC----CCTTSTTSSEECCCCTTTBCCSSCCBC----TTTCCBCBCTTCC
T ss_pred CCCCCCCCCcccCCCCCCcC----CCCCCCCCCccCCCCCCceecCCCccc----CCCCEEECCCCCc
Confidence 45555556667 79999973 233333333 23334422 343 3456799999985
No 473
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=39.87 E-value=19 Score=33.13 Aligned_cols=25 Identities=24% Similarity=0.695 Sum_probs=20.6
Q ss_pred ceeecCCCCceEEeecCCeeecCCCCceEeC
Q psy14257 184 DCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214 (841)
Q Consensus 184 ~C~~~~~~g~~~C~C~~G~~l~~d~~~C~~~ 214 (841)
.|.+. .++|.|.|.+||. +..|...
T Consensus 132 ~C~~~--~~~~~c~C~~g~~----G~~Ce~~ 156 (162)
T 1g1s_A 132 ECLET--IGNYTCSCYPGFY----GPECEYV 156 (162)
T ss_dssp EEEEC--SSSEEEEECTTEE----STTSCEE
T ss_pred EEecC--CCCceEeCCCCCc----CcccccC
Confidence 68888 8999999999998 3567655
No 474
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=38.82 E-value=3.3e+02 Score=27.68 Aligned_cols=69 Identities=12% Similarity=0.003 Sum_probs=39.5
Q ss_pred CceeEEEcCCCCeEEEEecCCCCCeEEEecCC-CCCcEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEc
Q psy14257 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMS-GEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTY 523 (841)
Q Consensus 445 ~P~giavd~~~g~Ly~td~~~~~~~I~r~~ld-G~~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~ 523 (841)
...++++++. +.+|.... .+.|++..-+ |..-+.+.. ..-.....+++++ .+++|.+.. .+.|++...
T Consensus 164 ~~~~~~~~~~-~~~~~~g~---~G~~~~S~d~gG~tW~~~~~-----~~~~~~~~~~~~~-~g~~~~~~~-~G~~~~s~~ 232 (327)
T 2xbg_A 164 VMRNLNRSPS-GEYVAVSS---RGSFYSTWEPGQTAWEPHNR-----TTSRRLHNMGFTP-DGRLWMIVN-GGKIAFSDP 232 (327)
T ss_dssp CEEEEEECTT-SCEEEEET---TSSEEEEECTTCSSCEEEEC-----CSSSCEEEEEECT-TSCEEEEET-TTEEEEEET
T ss_pred ceEEEEEcCC-CcEEEEEC---CCcEEEEeCCCCCceeECCC-----CCCCccceeEECC-CCCEEEEeC-CceEEEecC
Confidence 4567888875 55554432 4578887644 555555422 2223456778875 467776554 456666544
Q ss_pred C
Q psy14257 524 D 524 (841)
Q Consensus 524 d 524 (841)
|
T Consensus 233 D 233 (327)
T 2xbg_A 233 D 233 (327)
T ss_dssp T
T ss_pred C
Confidence 5
No 475
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=38.21 E-value=15 Score=31.04 Aligned_cols=40 Identities=28% Similarity=0.615 Sum_probs=29.2
Q ss_pred CC-CCCCCCCCc--cccccCCCCceeeeCCCCcee-ecCCCccc
Q psy14257 593 SP-CEMNNGNCS--HLCLIGMNGTYKCQCPHVMKL-MSDNKTCQ 632 (841)
Q Consensus 593 n~-C~~~ng~Cs--~lC~~~~~~~~~C~Cp~g~~l-~~d~~tC~ 632 (841)
|| |..+||||. -.|.........|.|..++.- .-++.-|.
T Consensus 51 Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~ 94 (105)
T 1n1i_A 51 SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCS 94 (105)
T ss_dssp CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEEC
T ss_pred CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEEC
Confidence 88 999999995 678877656789999888542 13555555
No 476
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=38.19 E-value=11 Score=31.71 Aligned_cols=41 Identities=15% Similarity=0.383 Sum_probs=30.4
Q ss_pred CCCCCC--CCccc-----ccccccCCCCCC--CcccCC-----CCcEEecCCCce
Q psy14257 121 ACFNGE--DEMFC-----DEKQCLRSDCHH--DCYNTP-----EGFMCVCPRDMY 161 (841)
Q Consensus 121 ~C~~g~--de~~C-----~eC~~~~~~C~~--~C~~~~-----g~~~C~C~~Gy~ 161 (841)
.|..|| |+..| +.|...++.|.. .|..+. +-..|.|.+||.
T Consensus 29 ~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 29 KCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred EecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 788887 34447 357777788963 788764 578999999985
No 477
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=34.22 E-value=3.7e+02 Score=26.96 Aligned_cols=145 Identities=11% Similarity=0.112 Sum_probs=72.5
Q ss_pred EEEEecCCCcEEEEccCCc---eEEEEecC-CCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC-----CcEEEEE
Q psy14257 415 LYWVESNLDQIEVAKLSGQ---FRRTLIAG-DMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE-----HRSVIVR 485 (841)
Q Consensus 415 LY~tD~~~~~I~v~~~~G~---~~~~l~~~-~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~-----~~~~i~~ 485 (841)
+..+-...+.|.+.++... ...++... .....+.|+++|...+|...... +.|..-+++.. ....+..
T Consensus 26 ~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~~~~~~~~~ 102 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRTFEMDLLAI 102 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------CCCEEEEE
T ss_pred EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCccccceeEEE
Confidence 4455555677888777642 22233122 33456899999986666555433 44444444321 1111111
Q ss_pred ecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcC-C-CeeEE--EEcCCCCCCcceEEEEe-cCeEEEEeCCCCe
Q psy14257 486 VDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYD-G-KDHHV--VLSNHDSLTHPFAIALF-ENHVYWTDWRTNS 560 (841)
Q Consensus 486 ~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~d-G-~~~~~--i~~~~~~l~~P~gla~~-~~~lY~td~~~~~ 560 (841)
.. ..-.....+++.+.+..|. +-...+.|...+++ + ...+. .+..+ -.....+++. ++.++++-...+.
T Consensus 103 ~~---~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd~~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 103 IE---GHENEVKGVAWSNDGYYLA-TCSRDKSVWIWETDESGEEYECISVLQEH--SQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EC-------CEEEEEECTTSCEEE-EEETTSCEEEEECCTTCCCCEEEEEECCC--SSCEEEEEECSSSSEEEEEETTSC
T ss_pred Ec---CCCCcEEEEEECCCCCEEE-EEeCCCEEEEEeccCCCCCeEEEEEeccC--CCceEEEEECCCCCEEEEEcCCCe
Confidence 10 2233457889987655554 44446788888874 2 21121 22221 1234566663 3555555555566
Q ss_pred EEEEeccC
Q psy14257 561 VIRANKWN 568 (841)
Q Consensus 561 i~~~~~~~ 568 (841)
|...+..+
T Consensus 177 i~iW~~~~ 184 (330)
T 2hes_X 177 VRIWKDYD 184 (330)
T ss_dssp EEEEEEET
T ss_pred EEEEECCC
Confidence 66555443
No 478
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=32.32 E-value=21 Score=37.91 Aligned_cols=35 Identities=31% Similarity=0.617 Sum_probs=29.6
Q ss_pred cCCCCCCCcccCCCCcEEecCCCceecCCCCcccc
Q psy14257 137 LRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 137 ~~~~C~~~C~~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
....|.+.|.+..+++.|.|..||.+..+...|..
T Consensus 130 ~~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~~ 164 (361)
T 4aqb_A 130 EELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCRV 164 (361)
T ss_dssp SSSCCSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cCCCCCccCCccCCCceeccCCCeEEecccccccc
Confidence 34578899999999999999999999877766643
No 479
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=30.97 E-value=22 Score=31.23 Aligned_cols=57 Identities=21% Similarity=0.418 Sum_probs=34.9
Q ss_pred ccCCCCCeEecC----CC-CCCCCCCCCCCCCCcccccccccCCCCCCCcccC-CCCcEEecCCCceecCCCCccccc
Q psy14257 101 DCQDVLRTCIPK----AL-VCDGEPACFNGEDEMFCDEKQCLRSDCHHDCYNT-PEGFMCVCPRDMYLQPDLITCSYL 172 (841)
Q Consensus 101 ~C~~~~~~Ci~~----~~-~Cdg~~~C~~g~de~~C~eC~~~~~~C~~~C~~~-~g~~~C~C~~Gy~l~~d~~~C~~~ 172 (841)
+|.++ +.|+.. .+ .| .|++|+.+..|. .... ..|... -.+|++.|..++ .|+.|+..
T Consensus 2 pC~ng-gtC~~~~~~~~~~~C----~Cp~g~~G~~Ce---~~~~---~~C~~g~G~~YrG~~~~t~----sG~~Cq~W 64 (122)
T 2fd6_A 2 DCLNG-GTCVSNKYFSNIHWC----NCPKKFGGQHCE---IDKS---KTCYEGNGHFYRGKASTDT----MGRPCLPW 64 (122)
T ss_dssp CCCSS-CEEEECTTTTTCEEE----ECCTTEESTTSC---EESS---CCSBCSSCTTCCSCCCBBT----TSCBBCCT
T ss_pred CCCCc-CCcCCCcccCCCCCc----cCCCCCCCcccc---ccCc---CCCcccccccceeeccccc----cCCcccCc
Confidence 48888 899875 34 68 899999887772 1110 124432 235777777665 36666543
No 480
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=29.74 E-value=6.5e+02 Score=28.39 Aligned_cols=297 Identities=8% Similarity=-0.061 Sum_probs=128.9
Q ss_pred ccccccccccEEEEeccccceeeecccccCCcceeEEEecCC-----------CeEEEEEecCCcccceEEEEeCCCCCc
Q psy14257 231 LRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVID-----------DKIYNATLIGNSLSNIDVVVQTGLSTA 299 (841)
Q Consensus 231 I~~~~~~~~~~~~l~~~~~~~~avd~~~~~~~~~lyw~d~~~-----------~~I~~~~~~~~~~~~~~~~~~~~l~~p 299 (841)
+...+.....+..+.+--....+..+....++ ||+.-... ..+.+.++..+........-..--..-
T Consensus 168 ~~~~dp~~~~W~~~~~~P~~~~~~av~~~~g~--l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~ 245 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLPIVPAAAAIEPTSGR--VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFC 245 (656)
T ss_dssp CCCCCTTSCEEEEEEECSSCCSEEEEETTTTE--EEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSS
T ss_pred cccCCCCCCeeeeeccCCCCceeEEEEecCCE--EEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCcc
Confidence 44445555566655432222233333332344 88763211 145666666554332222111100111
Q ss_pred cceEEeeecCceeEEEeeecCCCCCCCCCCEEEEccCCCccccccccCcCC-CceEEEEccCCEEEEEeCC------CCe
Q psy14257 300 EGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQW-PSSLVIDYNQDILYWCDSH------LNT 372 (841)
Q Consensus 300 ~giavD~~~~~~y~~~td~~~~~~~~~~~~I~~~~~dG~~~~~l~~~~~~~-P~glavD~~~~~lYwaD~~------~~~ 372 (841)
.+.++- ..+++|++ | ......++++++....-..+..-...+ -.+.++ ..+++||+.-.. ...
T Consensus 246 ~~~~~~-~~g~lyv~----G----G~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~-~~dg~iyv~GG~~~~~~~~~~ 315 (656)
T 1k3i_A 246 PGISMD-GNGQIVVT----G----GNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSAT-MSDGRVFTIGGSWSGGVFEKN 315 (656)
T ss_dssp CEEEEC-TTSCEEEE----C----SSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEE-CTTSCEEEECCCCCSSSCCCC
T ss_pred ccccCC-CCCCEEEe----C----CCCCCceEEecCcCCceeECCCCCccccccceEE-ecCCeEEEEeCcccCCccccc
Confidence 234443 23566664 1 112236888887654333332211111 122333 236789988651 256
Q ss_pred EEEEEecCCccEEEEeeeeecCCCccccCCCCCCccccccceEEEEecC---------CCcEEEEccCCceEEEEecCCC
Q psy14257 373 VESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESN---------LDQIEVAKLSGQFRRTLIAGDM 443 (841)
Q Consensus 373 I~~~~ldG~~~~~~~~~~~~~~~~~~~i~~~~~~avdw~~~~LY~tD~~---------~~~I~v~~~~G~~~~~l~~~~l 443 (841)
++++++....-+.+-.... .+. +..+..++-..++++|+.... ...++++++.............
T Consensus 316 ~e~yd~~t~~W~~~~~~~~--~p~----~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~ 389 (656)
T 1k3i_A 316 GEVYSPSSKTWTSLPNAKV--NPM----LTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQ 389 (656)
T ss_dssp EEEEETTTTEEEEETTSCS--GGG----CCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECE
T ss_pred ceEeCCCCCcceeCCCccc--ccc----ccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccc
Confidence 7888776544333210000 000 000000111233556655433 2355666665443222111110
Q ss_pred ---------CCceeEEEcCCCCeEEEEecCC------CCC---eEEEecCCCCCcEEEEEecccCCCCCCce---eEEEe
Q psy14257 444 ---------ESPRAIALDPRFGLLFWTDWDS------KAP---RIERCSMSGEHRSVIVRVDLLTSRGAWPN---GLTLD 502 (841)
Q Consensus 444 ---------~~P~giavd~~~g~Ly~td~~~------~~~---~I~r~~ldG~~~~~i~~~~~~~~~~~~P~---glalD 502 (841)
..-.++.++..++.||+.-... ... .|+..+.+......+.. ..+..|. +.++
T Consensus 390 ~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-----~~mp~~R~~~~~~~- 463 (656)
T 1k3i_A 390 SNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS-----NGLYFARTFHTSVV- 463 (656)
T ss_dssp ETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT-----TCCSSCCBSCEEEE-
T ss_pred cccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc-----CCCCCCcccCCeEE-
Confidence 0112344445678999874210 011 46665554433333320 1222222 2222
Q ss_pred ccCCEEEEEeCC-----------CCeEEEEEcCCCeeEEEEcCCCCCCcc---eEEEEe--cCeEEEEe
Q psy14257 503 YQLTRIYWIDAK-----------SDSIHTVTYDGKDHHVVLSNHDSLTHP---FAIALF--ENHVYWTD 555 (841)
Q Consensus 503 ~~~~~LYw~d~~-----------~~~I~~~~~dG~~~~~i~~~~~~l~~P---~gla~~--~~~lY~td 555 (841)
..+++||+.-.. ...++.+|+....-+.+.. +..| .+.++. +++||+.=
T Consensus 464 l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~----~~~~R~~hs~a~ll~dg~v~v~G 528 (656)
T 1k3i_A 464 LPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNP----NSIVRVYHSISLLLPDGRVFNGG 528 (656)
T ss_dssp CTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCC----CSSCCCTTEEEEECTTSCEEEEE
T ss_pred CCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCC----CCCccccccHhhcCCCcEEEecC
Confidence 236889987642 2568888887654443321 2222 244544 77777764
No 481
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=29.70 E-value=31 Score=32.65 Aligned_cols=28 Identities=29% Similarity=0.637 Sum_probs=17.6
Q ss_pred CCCCCcccC---CCCcEEecCCCceecCCCCcccc
Q psy14257 140 DCHHDCYNT---PEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 140 ~C~~~C~~~---~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
.|...|.|. .+-..|.|++||. |..|+.
T Consensus 150 ~C~~~C~ngG~Cv~P~~C~C~~Gw~----G~~C~~ 180 (188)
T 2ygo_A 150 ECPGGCRNGGFCNERRICECPDGFH----GPHCEG 180 (188)
T ss_dssp CCTTCCCTTCEECTTSCEECCTTCB----TTTTCB
T ss_pred ccCCCCCCCCEeCCCCcccCcCCCC----CCCCcC
Confidence 444445443 2345899999996 666653
No 482
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=28.69 E-value=30 Score=28.43 Aligned_cols=35 Identities=20% Similarity=0.528 Sum_probs=26.8
Q ss_pred CcccCCCCCCCCCCc--cccccCCCCceeeeCCCCce
Q psy14257 589 VVKKSPCEMNNGNCS--HLCLIGMNGTYKCQCPHVMK 623 (841)
Q Consensus 589 p~~~n~C~~~ng~Cs--~lC~~~~~~~~~C~Cp~g~~ 623 (841)
|....+|..+||||. ..|....+..-.|.|..++.
T Consensus 43 ~~~~~~C~~NNGGCd~nA~C~~~~~~kIvC~C~~~~~ 79 (95)
T 1b9w_A 43 PAPNMTCKDKNGGCAPEAECKMNDKNEIVCKCTKEGS 79 (95)
T ss_dssp ECTTCCTTTGGGGSCTTSEEEECTTSCEEEECCSTTE
T ss_pred cCCCCCccccCCCcCCCcceeecCCCcEEEECCCCCC
Confidence 344568999999995 67887776678899987754
No 483
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=28.46 E-value=29 Score=25.06 Aligned_cols=21 Identities=19% Similarity=0.368 Sum_probs=15.2
Q ss_pred cCCCCcEEecCCCceecCCCCcccc
Q psy14257 147 NTPEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 147 ~~~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
...+.+.|.|++||. |..|+.
T Consensus 25 ~~~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 1iox_A 25 VAEQTPSCVCDEGYI----GARCER 45 (50)
T ss_dssp TTTTEEEECCCTTEE----TTTTCE
T ss_pred cCCCCeEEECCCCcc----cCCCCe
Confidence 345678999999997 556653
No 484
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=28.28 E-value=29 Score=25.16 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=13.9
Q ss_pred CCCcEEecCCCceecCCCCcccc
Q psy14257 149 PEGFMCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 149 ~g~~~C~C~~Gy~l~~d~~~C~~ 171 (841)
...+.|.|++||. |..|+.
T Consensus 27 ~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 3e50_C 27 EDKPACVCHSGYV----GARCEH 45 (50)
T ss_pred CCCeEEECCCCCc----ccCCCc
Confidence 4678999999996 555653
No 485
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=27.51 E-value=6.9e+02 Score=27.95 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=50.7
Q ss_pred CCcEEEEccCCceEEEEecCCCCCceeEEEcCCCCeEEEEecCCCCCeEEEecCCCC--CcEEEEEecccCCCCCCceeE
Q psy14257 422 LDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGE--HRSVIVRVDLLTSRGAWPNGL 499 (841)
Q Consensus 422 ~~~I~v~~~~G~~~~~l~~~~l~~P~giavd~~~g~Ly~td~~~~~~~I~r~~ldG~--~~~~i~~~~~~~~~~~~P~gl 499 (841)
++.+.++++||..+..++.. +.++|.. |.+-|+-.......+...++|.. ..+++.-. +.-..|.|.
T Consensus 325 ~h~~~vaDVDgDG~dEIv~G------s~~iD~d-G~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~----E~~~~~~G~ 393 (591)
T 2zux_A 325 NHNLSIADVDGDGKDEIIFG------SMAVDHD-GKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVH----EDKNAKYGL 393 (591)
T ss_dssp CSCCEEECCSSSSSCEEEET------TEEECTT-SCEEEECSCCCCSCEEEECCCTTSSSCEEEEEC----CCTTSSCSE
T ss_pred CCCCeeEeCCCCCCceEEEe------eeEECCC-CCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEe----cCCCCCCcc
Confidence 47889999988765555543 2478865 66666653223457888888765 45666543 222345566
Q ss_pred E-EeccCCEEEEEeC
Q psy14257 500 T-LDYQLTRIYWIDA 513 (841)
Q Consensus 500 a-lD~~~~~LYw~d~ 513 (841)
+ .|...+.++|.-.
T Consensus 394 ~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 394 SFRDAATGKILWGVY 408 (591)
T ss_dssp EEEETTTCCEEEEEC
T ss_pred EEEECCCCcEEEEcC
Confidence 4 4667788888654
No 486
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=27.36 E-value=18 Score=33.04 Aligned_cols=27 Identities=22% Similarity=0.738 Sum_probs=21.5
Q ss_pred CCC--CCcccCCCCcEEecCCCceecCCCCccc
Q psy14257 140 DCH--HDCYNTPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 140 ~C~--~~C~~~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
+|+ ..|.+...+|.|.|.+||. |..|+
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEE----STTSC
T ss_pred CCCCCCEeecCCCCeeEECCCCcc----Ccccc
Confidence 454 3788889999999999997 55664
No 487
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=26.47 E-value=66 Score=38.72 Aligned_cols=32 Identities=28% Similarity=0.897 Sum_probs=20.2
Q ss_pred CCcEE--ecCCCceecCCCCccccccccCCCCCccCcee
Q psy14257 150 EGFMC--VCPRDMYLQPDLITCSYLHPCEAWGTCSQDCE 186 (841)
Q Consensus 150 g~~~C--~C~~Gy~l~~d~~~C~~~~eC~~~~~Cs~~C~ 186 (841)
....| .|+.||....+...|. +| .+.|...|.
T Consensus 280 ~~~~Cv~~CP~g~~~~~~~~~C~---~C--~~~C~k~C~ 313 (897)
T 2dtg_E 280 HNNKCIPECPSGYTMNSSNLLCT---PC--LGPCPKVCH 313 (897)
T ss_dssp ETTEEESSCCSSCEECSSSCBEE---CC--CSSCCCEEC
T ss_pred ECCEEccCCCCCccccCCCCeec---cC--CCCCCCCcc
Confidence 34467 6999998654445564 44 356777774
No 488
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=25.65 E-value=30 Score=39.03 Aligned_cols=24 Identities=29% Similarity=0.757 Sum_probs=19.0
Q ss_pred ceee-cCCCCceEEeec-CCeeecCCCCceEe
Q psy14257 184 DCEP-SVSNNSYKCTCH-AGYELEPDMFTCKS 213 (841)
Q Consensus 184 ~C~~-~~~~g~~~C~C~-~G~~l~~d~~~C~~ 213 (841)
.|.+ . .++|.|.|. +||. +..|..
T Consensus 15 ~C~~~~--~~~y~C~C~~~G~~----G~~Ce~ 40 (553)
T 1q4g_A 15 ICVRFG--LDRYQCDCTRTGYS----GPNCTI 40 (553)
T ss_dssp EEEEET--TTEEEEECTTSSEE----TTTTCE
T ss_pred CcCCCC--CCceEeeCCCCCcC----CCCCCC
Confidence 5677 6 889999999 9998 456754
No 489
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=25.32 E-value=79 Score=38.03 Aligned_cols=63 Identities=24% Similarity=0.588 Sum_probs=32.9
Q ss_pred CCcEE--ecCCCceecCCCCccccccccCC-CCCccC----ceeecCCCCceEEe--ecCCeeecCCCCceEeC
Q psy14257 150 EGFMC--VCPRDMYLQPDLITCSYLHPCEA-WGTCSQ----DCEPSVSNNSYKCT--CHAGYELEPDMFTCKSK 214 (841)
Q Consensus 150 g~~~C--~C~~Gy~l~~d~~~C~~~~eC~~-~~~Cs~----~C~~~~~~g~~~C~--C~~G~~l~~d~~~C~~~ 214 (841)
.+..| .|++||... .++.|....+|.. ...|.. .|.+.. .-...|. |+.||....+...|..=
T Consensus 233 ~~~~Cv~~Cp~~~y~~-~~~~C~~~~~C~~~~~~c~~~~~~~c~~~~-~~~~~Cv~~CP~g~~~~~~~~~C~~C 304 (897)
T 2dtg_E 233 LDGRCVETCPPPYYHF-QDWRCVNFSFCQDLHHKCKNSRRQGCHQYV-IHNNKCIPECPSGYTMNSSNLLCTPC 304 (897)
T ss_dssp BTTBCCSSCCSSCCCC-TTSBCCCHHHHHHHSSCCCSTTTTSCCCCE-EETTEEESSCCSSCEECSSSCBEECC
T ss_pred cCCcchhhcCCceeEe-cCcEEcChhHhhccCccccCCCccccccee-eECCEEccCCCCCccccCCCCeeccC
Confidence 34455 578776532 3677777666641 222321 232210 0123564 99998876555667643
No 490
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=25.08 E-value=8.5e+02 Score=28.19 Aligned_cols=211 Identities=10% Similarity=0.019 Sum_probs=104.5
Q ss_pred CCEEEEccCCCccccccccC----cCCCceEEEEccCCEEEEEeCC--CCeEEEEEecCCccEEEEeeeeecCCCccccC
Q psy14257 328 GGIEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSH--LNTVESVRVDGSERTVSFNLEVLGSDSRVGIP 401 (841)
Q Consensus 328 ~~I~~~~~dG~~~~~l~~~~----~~~P~glavD~~~~~lYwaD~~--~~~I~~~~ldG~~~~~~~~~~~~~~~~~~~i~ 401 (841)
+.|.+..-.|..-+.+.... ..+..-+++++.+..+.|+-.. ...|++..=.|..-+.+.. ++
T Consensus 519 g~i~~S~DgG~tW~~~~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~~~~~v~~S~D~G~tW~~~~~-----------l~ 587 (763)
T 3a0f_A 519 TQGAYTTNSGDSWTLFQTCVPSLEVGNGGTIAVGADGKTFVWSPSKADGKGPYTSSDYGKTWTAPSG-----------LS 587 (763)
T ss_dssp TTEEEESSTTSSCEECSSCCTTCBTTBCCEEEECTTSSCEEEECSSCCSSCCEEESSTTSCCBCCBS-----------CC
T ss_pred CcEEEECCCCcCCccCCCCCcccccCCcceEEEecCCCcEEEEecccCCCceEEeCCCCCCCeecCC-----------CC
Confidence 56666554555444432211 3456678899876665555542 3356554333433232211 11
Q ss_pred C-CCCCcccccc-ceEEEEecCCCcEEEEccCCceEEEEecCCCC----CceeEEEcC-CCCeEEEEecCCCCCeEEEec
Q psy14257 402 N-CRPEDNLWIG-KNLYWVESNLDQIEVAKLSGQFRRTLIAGDME----SPRAIALDP-RFGLLFWTDWDSKAPRIERCS 474 (841)
Q Consensus 402 ~-~~~~avdw~~-~~LY~tD~~~~~I~v~~~~G~~~~~l~~~~l~----~P~giavd~-~~g~Ly~td~~~~~~~I~r~~ 474 (841)
. ...+++|..+ +.||..+ .+.|++..-.|..-+.+. ..+. .+.-|+++| ..+.||.+-.+ ..|++..
T Consensus 588 ~~~~~i~~d~~~~~~~y~g~--~g~v~~S~DgG~tW~~~~-~~lp~~~~~~~~i~~~~~~~~~l~~~~~~---~~l~~S~ 661 (763)
T 3a0f_A 588 KQTTGIAADRVQANTFYVYV--EGDFFVSTDGGKSYTKKG-NGLPCCWTYTGTPVTSNLRAGELWVSVKG---VGIYHST 661 (763)
T ss_dssp CCCSCEEECSSSTTCEEEEE--TTEEEEESSTTSBCEEEC-BTSCCSSCCCEEEEECSSSTTCEEEEETT---TEEEEES
T ss_pred CCcceEEEeccCCCEEEEEc--CCCEEEEeCCCcCccccc-cCCCcccCccccEEECCCCCCcEEEEcCC---CeEEEEc
Confidence 1 0112333333 4466653 467776655555433332 2332 222278887 56788887643 4788887
Q ss_pred CCCCCcEEEEEecccCCCCCCc--e--eEEEe-ccCCEEEEEe---C-CCCeEEEEEcCCCeeEEEEcCCCCCCcceEEE
Q psy14257 475 MSGEHRSVIVRVDLLTSRGAWP--N--GLTLD-YQLTRIYWID---A-KSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIA 545 (841)
Q Consensus 475 ldG~~~~~i~~~~~~~~~~~~P--~--glalD-~~~~~LYw~d---~-~~~~I~~~~~dG~~~~~i~~~~~~l~~P~gla 545 (841)
=.|..-+.+... .....| . ++++. .....||.+- . ....|++..=.|..=+.+-.....+..+..|+
T Consensus 662 D~G~tW~~~~~~----~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~i~ 737 (763)
T 3a0f_A 662 DFGNTFTALAGS----GSSLNPAVFSIGAPQTPNATETLFLWGIPSASQPEGLYMSTDNGGLWTRLNDDAHNYGGATVIS 737 (763)
T ss_dssp STTSBCEECTTB----TTTBEEEEEEEECCSSTTSSCEEEEEEECSTTSCSEEEEESSTTSCCEECSCTTCCTBCEEEEE
T ss_pred CCCCCceEccCC----CcccccceeEEeeecCCCCCceEEEEEEcccCCCcEEEEeCCCCCCcEeccCccccCCCcceEE
Confidence 666665554210 111100 1 22222 2245788754 1 24567777655655554432212244444566
Q ss_pred Ee---cCeEEEEeCCCC
Q psy14257 546 LF---ENHVYWTDWRTN 559 (841)
Q Consensus 546 ~~---~~~lY~td~~~~ 559 (841)
+. .++||++-...+
T Consensus 738 ~~p~~~~~v~~~T~GrG 754 (763)
T 3a0f_A 738 GDPRIYGRVYIGMNGRG 754 (763)
T ss_dssp ECTTSTTEEEEEEBSSC
T ss_pred eCCCCCCEEEEeCCCCe
Confidence 64 257998876543
No 491
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=24.35 E-value=29 Score=27.86 Aligned_cols=19 Identities=16% Similarity=0.336 Sum_probs=14.0
Q ss_pred CCCCcEEecCCCceecCCCCccc
Q psy14257 148 TPEGFMCVCPRDMYLQPDLITCS 170 (841)
Q Consensus 148 ~~g~~~C~C~~Gy~l~~d~~~C~ 170 (841)
..+.+.|.|++||. |..|+
T Consensus 58 ~~~~~~C~C~~GYt----G~RCE 76 (79)
T 1xdt_R 58 ELRAPSCICHPGYH----GERCH 76 (79)
T ss_dssp GGTBCCEEECTTEE----STTCC
T ss_pred CCCCeEEEcCCCcc----ccccc
Confidence 34678999999997 44554
No 492
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=24.24 E-value=8.6e+02 Score=27.97 Aligned_cols=117 Identities=9% Similarity=0.112 Sum_probs=62.5
Q ss_pred ccccceEEEEe----------cCCCcEEEEccCCc--------eEEEEec-CCCCCceeEEEcCCCCeEEEEecCCCCCe
Q psy14257 409 LWIGKNLYWVE----------SNLDQIEVAKLSGQ--------FRRTLIA-GDMESPRAIALDPRFGLLFWTDWDSKAPR 469 (841)
Q Consensus 409 dw~~~~LY~tD----------~~~~~I~v~~~~G~--------~~~~l~~-~~l~~P~giavd~~~g~Ly~td~~~~~~~ 469 (841)
+...+.||+.- ..+++|.++++++. ..++++. ..-....++++.. ++||++-......+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~l~~~~~~~~~~~ 373 (711)
T 4hvt_A 296 GSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTK--DRVFLATYDNVVAK 373 (711)
T ss_dssp EEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECS--SCEEEEEEETTEEE
T ss_pred eeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEEC--CEEEEEEEECCEEE
Confidence 34457888731 24678999887642 2334343 3233456777764 46777654323567
Q ss_pred EEEecCCCC--CcEEEEEecccCCCCCCceeEEEeccCCEEEEEeC---CCCeEEEEEcCCCeeEEEE
Q psy14257 470 IERCSMSGE--HRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDA---KSDSIHTVTYDGKDHHVVL 532 (841)
Q Consensus 470 I~r~~ldG~--~~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~---~~~~I~~~~~dG~~~~~i~ 532 (841)
|++.++++. ..+.++.. .....-.++.++..++.++++-. ....++.+++. ...+.+.
T Consensus 374 l~~~~~~~g~~~~~~~i~l----p~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~-~~~~~l~ 436 (711)
T 4hvt_A 374 VVTFTLENEQWTKPVVLKL----PYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT-HELKIIR 436 (711)
T ss_dssp EEEECEETTEECCCEEECC----CSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT-SCEEEEE
T ss_pred EEEEECCCCceEEEeccCC----CCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC-CcEEEEe
Confidence 888887533 12221210 11122334455555666666432 34588888887 4444443
No 493
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=23.05 E-value=40 Score=21.86 Aligned_cols=22 Identities=18% Similarity=0.421 Sum_probs=16.9
Q ss_pred EEecCCCceecCCCCcccccccc
Q psy14257 153 MCVCPRDMYLQPDLITCSYLHPC 175 (841)
Q Consensus 153 ~C~C~~Gy~l~~d~~~C~~~~eC 175 (841)
-|.|++||.... ...|...++|
T Consensus 6 GC~C~~G~vrn~-~G~CV~~~~C 27 (32)
T 3ssb_I 6 KCYCEDGYARDV-NGKCIPIKDC 27 (32)
T ss_dssp EEEECTTEEECT-TSCEEEGGGC
T ss_pred CCCcCCCcEECC-CCCEECHHHC
Confidence 589999998754 3468877777
No 494
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=22.16 E-value=9.1e+02 Score=27.52 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=76.4
Q ss_pred cceEEEEecC------CCcEEEEccCCceEEEEecCCCCCce---eEEEcCCCCeEEEEecCCCCCeEEEecCCCCCcEE
Q psy14257 412 GKNLYWVESN------LDQIEVAKLSGQFRRTLIAGDMESPR---AIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSV 482 (841)
Q Consensus 412 ~~~LY~tD~~------~~~I~v~~~~G~~~~~l~~~~l~~P~---giavd~~~g~Ly~td~~~~~~~I~r~~ldG~~~~~ 482 (841)
+++||+.-.. ...++++++....-+.+ ..+..|+ +.++- .++.||+.-.......+++.++....-+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~--~~~p~~R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMI--KSLSHTRFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEEC--CCCSBCCBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEEC--CCCCCCcccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEE
Confidence 5889987532 34678888876544333 2333343 23331 26788887422112278888876544333
Q ss_pred EEEecccCCCCCCceeEEEeccCCEEEEEeCC-------CCeEEEEEcCCCe------eEEEEcCCCCCCcceEEEEec-
Q psy14257 483 IVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAK-------SDSIHTVTYDGKD------HHVVLSNHDSLTHPFAIALFE- 548 (841)
Q Consensus 483 i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~-------~~~I~~~~~dG~~------~~~i~~~~~~l~~P~gla~~~- 548 (841)
+...+..+..-....+++++...++||+.-.. .+.++++++.... -+.+......-..-.++++.+
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~ 607 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP 607 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC
Confidence 32110001122233447777655899998643 3579999998765 333432110011223566677
Q ss_pred CeEEEEe
Q psy14257 549 NHVYWTD 555 (841)
Q Consensus 549 ~~lY~td 555 (841)
++||+.-
T Consensus 608 ~~iyv~G 614 (695)
T 2zwa_A 608 RKLLIVG 614 (695)
T ss_dssp TEEEEEC
T ss_pred CEEEEEC
Confidence 9999874
No 495
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=21.84 E-value=39 Score=24.45 Aligned_cols=15 Identities=20% Similarity=0.713 Sum_probs=11.4
Q ss_pred cCCCCcEEecCCCce
Q psy14257 147 NTPEGFMCVCPRDMY 161 (841)
Q Consensus 147 ~~~g~~~C~C~~Gy~ 161 (841)
...+.+.|.|++||.
T Consensus 29 ~~~~~~~C~C~~gy~ 43 (50)
T 2rnl_A 29 EHLEAVTCKCQQEYF 43 (50)
T ss_dssp TTTTEEEEECCSSCC
T ss_pred cCCCCeeEECCCCcc
Confidence 345567899999996
No 496
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=21.78 E-value=40 Score=38.25 Aligned_cols=34 Identities=29% Similarity=0.869 Sum_probs=22.6
Q ss_pred cccCCCCCccC--ceee-cCCCCceEEeec-CCeeecCCCCceEe
Q psy14257 173 HPCEAWGTCSQ--DCEP-SVSNNSYKCTCH-AGYELEPDMFTCKS 213 (841)
Q Consensus 173 ~eC~~~~~Cs~--~C~~-~~~~g~~~C~C~-~G~~l~~d~~~C~~ 213 (841)
++|. ..+|.+ .|.+ . .++|.|.|. +||. +..|..
T Consensus 2 d~C~-s~PC~ngG~C~~~~--~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 2 NPCC-SNPCQNRGECMSTG--FDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CTTT-TCCCCTTCEEEEEE--TTEEEEECTTSSEE----TTTTCE
T ss_pred CCCC-CCCCCCCCEeeCCC--CCCeEEecCCCCcc----CCCCCC
Confidence 4553 235643 6764 3 489999999 9996 566754
No 497
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=21.45 E-value=44 Score=31.59 Aligned_cols=25 Identities=24% Similarity=0.667 Sum_probs=20.3
Q ss_pred ccCCCCCeEecCCCCCCCCCCCCCCCCCccc
Q psy14257 101 DCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131 (841)
Q Consensus 101 ~C~~~~~~Ci~~~~~Cdg~~~C~~g~de~~C 131 (841)
.|.++ |.|+. ...| .|++|+.+..|
T Consensus 154 ~C~ng-G~Cv~-P~~C----~C~~Gw~G~~C 178 (188)
T 2ygo_A 154 GCRNG-GFCNE-RRIC----ECPDGFHGPHC 178 (188)
T ss_dssp CCCTT-CEECT-TSCE----ECCTTCBTTTT
T ss_pred CCCCC-CEeCC-CCcc----cCcCCCCCCCC
Confidence 68888 99977 4567 89999998766
No 498
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=21.13 E-value=46 Score=29.11 Aligned_cols=24 Identities=21% Similarity=0.631 Sum_probs=18.1
Q ss_pred CcccCC--CCc-EEecCCCceecCCCCcccc
Q psy14257 144 DCYNTP--EGF-MCVCPRDMYLQPDLITCSY 171 (841)
Q Consensus 144 ~C~~~~--g~~-~C~C~~Gy~l~~d~~~C~~ 171 (841)
.|.+.. .+| +|.|++||. |..|+.
T Consensus 8 tC~~~~~~~~~~~C~Cp~g~~----G~~Ce~ 34 (122)
T 2fd6_A 8 TCVSNKYFSNIHWCNCPKKFG----GQHCEI 34 (122)
T ss_dssp EEEECTTTTTCEEEECCTTEE----STTSCE
T ss_pred CcCCCcccCCCCCccCCCCCC----Cccccc
Confidence 577664 556 999999997 667764
No 499
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=20.52 E-value=44 Score=36.01 Aligned_cols=29 Identities=24% Similarity=0.610 Sum_probs=22.2
Q ss_pred CCCCC--CcccCCCCcEEecCC-CceecCCCCcccc
Q psy14257 139 SDCHH--DCYNTPEGFMCVCPR-DMYLQPDLITCSY 171 (841)
Q Consensus 139 ~~C~~--~C~~~~g~~~C~C~~-Gy~l~~d~~~C~~ 171 (841)
.+|.+ .|.+...+|.|.|+. ||. |..|+.
T Consensus 191 ~pC~n~g~C~~~~~~~~C~C~~~~~~----G~~C~~ 222 (410)
T 3asi_A 191 DSCSNQGVCLQQWDGFSCDCSMTSFS----GPLCND 222 (410)
T ss_dssp TSSSTTCEEEECSSSEEEECTTTSEE----STTSCE
T ss_pred ccCCCCCEecCCCCCceEeccCCccc----CCCCCC
Confidence 46653 899999999999996 886 556654
No 500
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=20.04 E-value=7.2e+02 Score=25.52 Aligned_cols=106 Identities=5% Similarity=-0.070 Sum_probs=59.8
Q ss_pred ceEEEEecCCCcEEEEccCCceEEE--Ee---cCCCCCceeEEEcC-------CCCeEEEEecCCCCCeEEEecCC-CCC
Q psy14257 413 KNLYWVESNLDQIEVAKLSGQFRRT--LI---AGDMESPRAIALDP-------RFGLLFWTDWDSKAPRIERCSMS-GEH 479 (841)
Q Consensus 413 ~~LY~tD~~~~~I~v~~~~G~~~~~--l~---~~~l~~P~giavd~-------~~g~Ly~td~~~~~~~I~r~~ld-G~~ 479 (841)
+++..+-...+.|...+++...... ++ .+.....+.|++.| ..|.+..+-.. ...|..-++. +..
T Consensus 101 ~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~--D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 101 SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGD--DCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEET--TSEEEEEEEETTEE
T ss_pred CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEEC--CCeEEEEECCCCce
Confidence 3344455556778777776543321 22 22345578899876 24667676554 3444444442 222
Q ss_pred cEEEEEecccCCCCCCceeEEEeccCCEEEEEeCCCCeEEEEEcCCC
Q psy14257 480 RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGK 526 (841)
Q Consensus 480 ~~~i~~~~~~~~~~~~P~glalD~~~~~LYw~d~~~~~I~~~~~dG~ 526 (841)
...+.. .-.....+++.+.+.++..+-...+.|...++...
T Consensus 179 ~~~~~~------~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~ 219 (393)
T 4gq1_A 179 ILAGYP------LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN 219 (393)
T ss_dssp EEEEEE------CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC
T ss_pred eeeecC------CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC
Confidence 222222 22345788888776666666666788888887653
Done!