RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14257
(841 letters)
>d1npea_ b.68.5.1 (A:) Nidogen {Mouse (Mus musculus) [TaxId: 10090]}
Length = 263
Score = 165 bits (418), Expect = 1e-46
Identities = 70/256 (27%), Positives = 112/256 (43%), Gaps = 18/256 (7%)
Query: 330 IEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNL 389
+E+ M + + L D ++YW D ++ + G E T
Sbjct: 17 LERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII-- 74
Query: 390 EVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAI 449
+G P D +G+ ++W +S LD+IEVAK+ G RR L + +PR I
Sbjct: 75 -----RQDLGSPEGIALD--HLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGI 127
Query: 450 ALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIY 509
DP G L+WTDW+ P+IE M G +R ++ PNGLT D +++
Sbjct: 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILA-----QDNLGLPNGLTFDAFSSQLC 182
Query: 510 WIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNG 569
W+DA + + VL L +PFA+ + ++Y+TDW+TNSVI +
Sbjct: 183 WVDAGTHRAECLNPAQPGRRKVLEG---LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAIS 239
Query: 570 SDVTLIQRTLTQPFIY 585
++ Q +Y
Sbjct: 240 KEMDTFHP-HKQTRLY 254
Score = 123 bits (310), Expect = 4e-32
Identities = 56/287 (19%), Positives = 107/287 (37%), Gaps = 40/287 (13%)
Query: 222 FVIFSNRHELRGVDL------RTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKI 275
++F+ ++ + L +T L K I L F +V+WTD+ + I
Sbjct: 3 HLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCV--DKVVYWTDISEPSI 60
Query: 276 YNATLIGNSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGM 335
A+L G +++ L + EG+A+D +G+ ++ +S IE A M
Sbjct: 61 GRASLHGG---EPTTIIRQDLGSPEGIALDHLGRTIFWT---------DSQLDRIEVAKM 108
Query: 336 HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT--VESVRVDGSERTVSFNLEVLG 393
G R L + P +V D + LYW D + + +E+ +DG+ R +
Sbjct: 109 DGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQ----- 163
Query: 394 SDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDP 453
+ L WV++ + E + RR ++ G ++ P A+
Sbjct: 164 ----DNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSYG 218
Query: 454 RFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLT 500
L++TDW + + ++ + G+T
Sbjct: 219 --KNLYYTDWKTN--SVIAMDLAISKEMDTF----HPHKQTRLYGIT 257
Score = 74.1 bits (181), Expect = 3e-15
Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 27/218 (12%)
Query: 637 QFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPN--NLNFDAANKKIYWTDQEYNEVK 694
++F++ +I + LE + + + L FD +K +YWTD +
Sbjct: 2 THLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIG 61
Query: 695 RSSI------------VGGQIQLVVDAVFEFYLTPLSKRSSIV-----GGQIQLVVDAGI 737
R+S+ +G + +D + S+ I G Q +++ D G+
Sbjct: 62 RASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGL 121
Query: 738 SHPSGLAIDWIAQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVW 797
+P G+ D + N++ + KI +++G + L + +
Sbjct: 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRI------LAQDNLGLPNGLTFD 175
Query: 798 PVKGKMFWSNVTKQVVTIEMAFMDGTKRETVVSQKKYP 835
++ W + E R V+ +YP
Sbjct: 176 AFSSQLCWVDAGTH--RAECLNPAQPGRRKVLEGLQYP 211
Score = 65.3 bits (158), Expect = 4e-12
Identities = 39/253 (15%), Positives = 72/253 (28%), Gaps = 13/253 (5%)
Query: 457 LLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSD 516
LLF IER + L GL D +YW D
Sbjct: 4 LLFAQTGK-----IERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEP 58
Query: 517 SIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQ 576
SI + G + ++ A+ ++WTD + + + A L
Sbjct: 59 SIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFD 118
Query: 577 RTLTQP-FIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCP-HVMKLMSDNKTCQVA 634
L P I + V N + + M+GT + + L + +
Sbjct: 119 TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS 178
Query: 635 DSQFIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVK 694
+ + ++ P + + + P + K +Y+TD + N V
Sbjct: 179 SQLCWVDAGTHRAECLNPAQPGRRKV----LEGLQYPFAVTSY--GKNLYYTDWKTNSVI 232
Query: 695 RSSIVGGQIQLVV 707
+ +
Sbjct: 233 AMDLAISKEMDTF 245
>d1ijqa1 b.68.5.1 (A:377-642) Low density lipoprotein (LDL) receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 266
Score = 156 bits (395), Expect = 2e-43
Identities = 75/259 (28%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 325 SSDGGIEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERT 384
++ + K + + L+ N++ +L + + +YW D + S ++D +
Sbjct: 7 TNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV 65
Query: 385 VSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDME 444
S++ + + P+ D WI N+YW +S L + VA G R+TL +
Sbjct: 66 SSYDTVI---SRDIQAPDGLAVD--WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGS 120
Query: 445 SPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQ 504
PRAI +DP G ++WTDW + +I++ ++G +V ++ WPNG+TLD
Sbjct: 121 KPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENI-----QWPNGITLDLL 174
Query: 505 LTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRA 564
R+YW+D+K SI ++ +G + +L + L HPF++A+FE+ V+WTD ++ A
Sbjct: 175 SGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSA 234
Query: 565 NKWNGSDVTLIQRTLTQPF 583
N+ GSDV L+ L P
Sbjct: 235 NRLTGSDVNLLAENLLSPE 253
Score = 133 bits (335), Expect = 2e-35
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 25/268 (9%)
Query: 221 PFVIFSNRHELRGVDLRTFNVIALISSLKNTIALDFYYTPTANMVFWTDVIDDKIYNATL 280
++ F+NRHE+R + L +LI +L+N +ALD +N ++W+D+ I + L
Sbjct: 2 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQL 59
Query: 281 IG-NSLSNIDVVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGEN 339
+ +S+ D V+ + +GLAVDWI N+Y +S G + A G
Sbjct: 60 DRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWT---------DSVLGTVSVADTKGVK 110
Query: 340 RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSERTVSFNLEVLGSDSRV 398
R L +N P ++V+D +YW D + ++G +
Sbjct: 111 RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---------E 161
Query: 399 GIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLL 458
I + LYWV+S L I ++G R+T++ + +L +
Sbjct: 162 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKV 221
Query: 459 FWTDWDSKAPRIERCSM-SGEHRSVIVR 485
FWTD ++ I + +G +++
Sbjct: 222 FWTDIINE--AIFSANRLTGSDVNLLAE 247
Score = 65.3 bits (158), Expect = 3e-12
Identities = 35/183 (19%), Positives = 67/183 (36%), Gaps = 34/183 (18%)
Query: 638 FIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSS 697
++ F+ E+R + L+ Y ++ IP + + L+ + A+ +IYW+D + +
Sbjct: 3 YLFFTNRHEVRKMTLDRSEYTSL----IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQ 58
Query: 698 IVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWIAQNMFIAVS 757
+ V+ I P GLA+DWI + I +
Sbjct: 59 LDRAHG----------------------VSSYDTVISRDIQAPDGLAVDWI--HSNIYWT 94
Query: 758 SPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVWPVKGKMFWSNVTKQVVTIEM 817
+ V + +G + T+ SK +I V PV G M+W++ +
Sbjct: 95 DSVLGTVSVADTKGVKRKTLF------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKG 148
Query: 818 AFM 820
Sbjct: 149 GLN 151
Score = 61.5 bits (148), Expect = 7e-11
Identities = 39/288 (13%), Positives = 90/288 (31%), Gaps = 49/288 (17%)
Query: 420 SNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEH 479
+N ++ L T + ++ + A+ + ++W+D + I + H
Sbjct: 7 TNRHEVRKMTLDRS-EYTSLIPNLRNVVALDTEVASNRIYWSDLSQR--MICSTQLDRAH 63
Query: 480 RSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLSNHDSLT 539
+++ P+GL +D+ + IYW D+ ++ G + + S
Sbjct: 64 GVSSYDT-VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKP 122
Query: 540 HPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVVKKSPCEMNN 599
+ +YWTDW T + I+ +N
Sbjct: 123 RAIVVDPVHGFMYWTDWGTPAKIK------------------------------KGGLNG 152
Query: 600 GNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADSQFIIFSRPREIRGVDLEHPYYHT 659
+ L + + + + + S+ I +D+ T
Sbjct: 153 VDIYSLVTENIQWPNGITLDLLSGRL------------YWVDSKLHSISSIDVNGGNRKT 200
Query: 660 IPTISIPQVFSPNNLNFDAANKKIYWTDQEYNEVKRSSIVGGQIQLVV 707
I ++ P +L K++WTD + ++ + G ++
Sbjct: 201 ILEDE-KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLL 245
Score = 55.7 bits (133), Expect = 6e-09
Identities = 34/289 (11%), Positives = 87/289 (30%), Gaps = 41/289 (14%)
Query: 513 AKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIA--LFENHVYWTDWRTNSVIRANKWNGS 570
+ +T D ++ ++ N L + A+ + N +YW+D +
Sbjct: 7 TNRHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH 63
Query: 571 DVTLIQRTLTQPFIYVNGVVKKSPCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKT 630
V+ +++ +G+ S L + + T + + +
Sbjct: 64 GVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPR 123
Query: 631 CQVADSQ--FIIFSRPREIRGVDLEHPYYHTIPTISIPQVFSPNNLNFDAANKKIYWTDQ 688
V D F+ ++ + I ++ + PN + D + ++YW D
Sbjct: 124 AIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 183
Query: 689 EYNEVKRSSIVGGQIQLVVDAVFEFYLTPLSKRSSIVGGQIQLVVDAGISHPSGLAIDWI 748
+ + + + GG + +++ + ++HP LA+
Sbjct: 184 KLHSISSIDVNGGNRKTILED------------------------EKRLAHPFSLAVF-- 217
Query: 749 AQNMFIAVSSPTQSKIVVCNLEGEYQTTILSNESNDTSTLSKISSIAVW 797
+ + I N +L+ L + ++
Sbjct: 218 --EDKVFWTDIINEAIFSANRLTGSDVNLLA------ENLLSPEDMVLF 258
>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 54.8 bits (132), Expect = 2e-10
Identities = 10/42 (23%), Positives = 14/42 (33%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636
C NG C C C+C L++D +C
Sbjct: 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVE 43
Score = 41.3 bits (97), Expect = 1e-05
Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213
G C Q C C CH GY L D +C
Sbjct: 7 GGCEQYCSDHTGT-KRSCRCHEGYSLLADGVSCTP 40
Score = 35.6 bits (82), Expect = 0.001
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 141 CHHDCYNTPEG-FMCVCPRDMYLQPDLITCS 170
C C + C C L D ++C+
Sbjct: 9 CEQYCSDHTGTKRSCRCHEGYSLLADGVSCT 39
>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 57
Score = 54.4 bits (131), Expect = 2e-10
Identities = 11/42 (26%), Positives = 17/42 (40%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636
C + NG C C + C C +L + K+C+ A
Sbjct: 3 CNIKNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 44
Score = 40.6 bits (95), Expect = 2e-05
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213
G C Q C+ S +N C+C GY L + +C+
Sbjct: 8 GRCEQFCKNSA-DNKVVCSCTEGYRLAENQKSCEP 41
Score = 34.0 bits (78), Expect = 0.004
Identities = 7/30 (23%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 141 CHHDCYNTPE-GFMCVCPRDMYLQPDLITC 169
C C N+ + +C C L + +C
Sbjct: 10 CEQFCKNSADNKVVCSCTEGYRLAENQKSC 39
>d1cr8a_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 42
Score = 51.0 bits (122), Expect = 3e-09
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69
C F C CIPL W CDG DC D+SDE C
Sbjct: 4 CHTDEFQCRLDGLCIPLRWRCDGDTDCM--DSSDEKSC 39
Score = 43.6 bits (103), Expect = 1e-06
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCD 132
C EF C+ CIP CDG+ C + DE C+
Sbjct: 4 CHTDEFQCRLD-GLCIPLRWRCDGDTDCMDSSDEKSCE 40
Score = 38.6 bits (90), Expect = 8e-05
Identities = 13/21 (61%), Positives = 14/21 (66%)
Query: 2 TCIIAYWKCDGDEDCKDGSDE 22
CI W+CDGD DC D SDE
Sbjct: 16 LCIPLRWRCDGDTDCMDSSDE 36
>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus)
[TaxId: 9913]}
Length = 51
Score = 50.6 bits (121), Expect = 5e-09
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVAD 635
C ++NG C C +C C H L D+K+C +
Sbjct: 1 CSLDNGGCDQFCR-EERSEVRCSCAHGYVLGDDSKSCVSTE 40
Score = 40.2 bits (94), Expect = 2e-05
Identities = 12/35 (34%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213
G C Q C + +C+C GY L D +C S
Sbjct: 6 GGCDQFCREER--SEVRCSCAHGYVLGDDSKSCVS 38
Score = 39.8 bits (93), Expect = 4e-05
Identities = 7/35 (20%), Positives = 8/35 (22%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175
C C C C L D +C
Sbjct: 8 CDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42
>d1f8za_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 50.1 bits (120), Expect = 6e-09
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVN 71
C F C++ CI + CD + DC D SDE CVN
Sbjct: 3 CRPDEFQCSDG-NCIHGSRQCDREYDCK--DMSDEVGCVN 39
Score = 44.3 bits (105), Expect = 7e-07
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
C P EF C D CI + CD E C + DE+ C
Sbjct: 3 CRPDEFQCSD--GNCIHGSRQCDREYDCKDMSDEVGC 37
Score = 38.5 bits (90), Expect = 7e-05
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 2 TCIIAYWKCDGDEDCKDGSDELAEHCQD 29
CI +CD + DCKD SDE C +
Sbjct: 14 NCIHGSRQCDREYDCKDMSDE--VGCVN 39
>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 50
Score = 50.2 bits (120), Expect = 7e-09
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636
C ++NG C+H CL G +C C KL D C A
Sbjct: 2 CSLDNGGCTHYCL-EEVGWRRCSCAPGYKLGDDLLQCHPAVK 42
Score = 39.8 bits (93), Expect = 3e-05
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213
G C+ C V +C+C GY+L D+ C
Sbjct: 7 GGCTHYCLEEV--GWRRCSCAPGYKLGDDLLQCHP 39
Score = 37.8 bits (88), Expect = 1e-04
Identities = 9/35 (25%), Positives = 10/35 (28%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPC 175
C H C C C L DL+ C
Sbjct: 9 CTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAVKF 43
>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human
(Homo sapiens) [TaxId: 9606]}
Length = 51
Score = 49.8 bits (119), Expect = 9e-09
Identities = 10/42 (23%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQVADS 636
C ++NG+C C + C C L + K C
Sbjct: 3 CSLDNGDCDQFCH-EEQNSVVCSCARGYTLADNGKACIPTGP 43
Score = 40.6 bits (95), Expect = 2e-05
Identities = 12/35 (34%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKS 213
G C Q C NS C+C GY L + C
Sbjct: 8 GDCDQFCHEEQ--NSVVCSCARGYTLADNGKACIP 40
Score = 39.0 bits (91), Expect = 7e-05
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 134 KQCLRSD--CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
K C + C C+ +C C R L + C
Sbjct: 1 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKAC 38
>d2fcwb1 g.12.1.1 (B:86-124) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 48.9 bits (117), Expect = 1e-08
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69
+ C ++ F C++ +CI + CD DC D SDE C
Sbjct: 1 KTCSQAEFRCHDG-KCISRQFVCDSDRDCL--DGSDEASC 37
Score = 44.7 bits (106), Expect = 5e-07
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
C EF C D CI + VCD + C +G DE C
Sbjct: 3 CSQAEFRCHD--GKCISRQFVCDSDRDCLDGSDEASC 37
Score = 38.5 bits (90), Expect = 8e-05
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 3 CIIAYWKCDGDEDCKDGSDE 22
CI + CD D DC DGSDE
Sbjct: 15 CISRQFVCDSDRDCLDGSDE 34
>d1v9u5_ g.12.1.1 (5:) Very low-density lipoprotein receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 49.1 bits (117), Expect = 1e-08
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 32 CDESHFTC-NETLRCIPLAWACDGQPDCGLNDTSDEDHCVN 71
C +C + +CIP++W CDG+ DC DE++C N
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCD--SGEDEENCGN 39
Score = 47.5 bits (113), Expect = 4e-08
Identities = 17/39 (43%), Positives = 19/39 (48%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDE 133
C HE C CIP + CDGE C +GEDE C
Sbjct: 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGN 39
Score = 38.7 bits (90), Expect = 7e-05
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHCQD 29
CI W+CDG+ DC G DE E+C +
Sbjct: 15 CIPVSWRCDGENDCDSGEDE--ENCGN 39
>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 50
Score = 49.2 bits (117), Expect = 2e-08
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 595 CEMNNGNCSHLCLI-----GMNGTYKCQCPHVMKLMSDNKTC 631
++NG C +LCL + + C CP M L D ++C
Sbjct: 7 TTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
Score = 38.4 bits (89), Expect = 1e-04
Identities = 12/37 (32%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Query: 179 GTCSQDCEPSVSNN----SYKCTCHAGYELEPDMFTC 211
G C C P+ N + C C G L DM +C
Sbjct: 12 GGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
Score = 35.7 bits (82), Expect = 0.001
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 6/45 (13%)
Query: 131 CDEKQCLRSDCHHDCYNTPE------GFMCVCPRDMYLQPDLITC 169
C+ C + C P+ F C CP M L D+ +C
Sbjct: 4 CERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSC 48
>d1d2la_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 48.6 bits (116), Expect = 2e-08
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 28 QDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCV 70
+C F C + RCI W CDG DC D SDE +
Sbjct: 2 SPPQCQPGEFACANS-RCIQERWKCDGDNDCL--DNSDEAPAL 41
Score = 44.4 bits (105), Expect = 6e-07
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
P C+P EF C + CI + CDG+ C + DE
Sbjct: 4 PQCQPGEFACAN--SRCIQERWKCDGDNDCLDNSDEAPA 40
Score = 42.5 bits (100), Expect = 3e-06
Identities = 15/25 (60%), Positives = 15/25 (60%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHC 27
CI WKCDGD DC D SDE C
Sbjct: 18 CIQERWKCDGDNDCLDNSDEAPALC 42
>d1j8ea_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 48.6 bits (116), Expect = 2e-08
Identities = 22/46 (47%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 30 RKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTD 75
C + F CN RCIP W CDG DCG D SDE H CT+
Sbjct: 3 HSCSSTQFKCNSG-RCIPEHWTCDGDNDCG--DYSDETHAN--CTN 43
Score = 44.8 bits (106), Expect = 5e-07
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 7/46 (15%)
Query: 86 GNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
G+ + C +F C CIP+ CDG+ C + DE
Sbjct: 1 GSHS-----CSSTQFKCNS--GRCIPEHWTCDGDNDCGDYSDETHA 39
Score = 44.0 bits (104), Expect = 9e-07
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHCQDR 30
CI +W CDGD DC D SDE +C ++
Sbjct: 17 CIPEHWTCDGDNDCGDYSDETHANCTNQ 44
>d2gtlo2 g.12.1.1 (O:60-100) Extracellular hemoglobin linker l3
subunit {Common earthworm (Lumbricus terrestris) [TaxId:
6398]}
Length = 41
Score = 47.9 bits (114), Expect = 4e-08
Identities = 19/39 (48%), Positives = 21/39 (53%)
Query: 93 PACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
P+C+ HE C CI K VCDG C NGEDE C
Sbjct: 1 PSCDEHEHQCGGDDPQCISKLFVCDGHNDCRNGEDEKDC 39
Score = 47.5 bits (113), Expect = 4e-08
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 32 CDESHFTC-NETLRCIPLAWACDGQPDCGLNDTSDEDHCV 70
CDE C + +CI + CDG DC + DE C
Sbjct: 3 CDEHEHQCGGDDPQCISKLFVCDGHNDCR--NGEDEKDCT 40
Score = 37.5 bits (87), Expect = 2e-04
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 3 CIIAYWKCDGDEDCKDGSDE 22
CI + CDG DC++G DE
Sbjct: 17 CISKLFVCDGHNDCRNGEDE 36
>d1k7ba_ g.12.1.1 (A:) soluble Tva ectodomain, sTva47 {Quail
(Coturnix coturnix) [TaxId: 9091]}
Length = 42
Score = 46.8 bits (111), Expect = 8e-08
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 6/42 (14%)
Query: 32 CDESHFTCNETL----RCIPLAWACDGQPDCGLNDTSDEDHC 69
C F C+E C P W CDG PDC D DE C
Sbjct: 2 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDCD--DGRDEWGC 41
Score = 44.9 bits (106), Expect = 5e-07
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Query: 94 ACEPHEFDCQDVLR---TCIPKALVCDGEPACFNGEDEMFC 131
+C P +F C + C P+ +CDG P C +G DE C
Sbjct: 1 SCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWGC 41
Score = 38.3 bits (89), Expect = 8e-05
Identities = 11/21 (52%), Positives = 11/21 (52%)
Query: 3 CIIAYWKCDGDEDCKDGSDEL 23
C W CDG DC DG DE
Sbjct: 19 CYPQDWLCDGHPDCDDGRDEW 39
>d1f5ya1 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 47.1 bits (112), Expect = 8e-08
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)
Query: 31 KCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCV 70
+C+ + F C + +CI W CDG +C D SDE
Sbjct: 7 RCERNEFQCQDG-KCISYKWVCDGSAECQ--DGSDESQET 43
Score = 43.6 bits (103), Expect = 1e-06
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
CE +EF CQD CI VCDG C +G DE
Sbjct: 8 CERNEFQCQD--GKCISYKWVCDGSAECQDGSDESQE 42
Score = 41.0 bits (96), Expect = 1e-05
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHC 27
CI W CDG +C+DGSDE E C
Sbjct: 20 CISYKWVCDGSAECQDGSDESQETC 44
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 46.7 bits (111), Expect = 8e-08
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 594 PCEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C NNG CSH+C + Y+C CP +L + C+
Sbjct: 4 ECLDNNGGCSHVCN-DLKIGYECLCPDGFQL-VAQRRCE 40
Score = 34.3 bits (79), Expect = 0.002
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCK 212
G CS C Y+C C G++L C+
Sbjct: 10 GGCSHVCNDLK--IGYECLCPDGFQLV-AQRRCE 40
Score = 32.8 bits (75), Expect = 0.008
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
C H C + G+ C+CP L C
Sbjct: 12 CSHVCNDLKIGYECLCPDGFQLV-AQRRC 39
>d1ajja_ g.12.1.1 (A:) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 37
Score = 46.7 bits (111), Expect = 9e-08
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69
C F C CI +W CDG PDC D SDE++C
Sbjct: 2 CSAFEFHCLSG-ECIHSSWRCDGGPDCK--DKSDEENC 36
Score = 44.7 bits (106), Expect = 5e-07
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
C EF C CI + CDG P C + DE C
Sbjct: 2 CSAFEFHCLS--GECIHSSWRCDGGPDCKDKSDEENC 36
Score = 37.8 bits (88), Expect = 1e-04
Identities = 13/20 (65%), Positives = 15/20 (75%)
Query: 3 CIIAYWKCDGDEDCKDGSDE 22
CI + W+CDG DCKD SDE
Sbjct: 14 CIHSSWRCDGGPDCKDKSDE 33
>d1f5ya2 g.12.1.1 (A:45-85) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 46.7 bits (111), Expect = 9e-08
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 32 CDESHFTC-NETLRCIPLAWACDGQPDCGLNDTSDEDHC 69
C F+C RCIP W CDGQ DC + SDE C
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCD--NGSDEQGC 41
Score = 46.7 bits (111), Expect = 1e-07
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
C+ +F C + CIP+ CDG+ C NG DE C
Sbjct: 5 CKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGC 41
Score = 37.9 bits (88), Expect = 1e-04
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 3 CIIAYWKCDGDEDCKDGSDE 22
CI +W+CDG DC +GSDE
Sbjct: 19 CIPQFWRCDGQVDCDNGSDE 38
>d2gtln2 g.12.1.1 (N:61-101) Extracellular hemoglobin linker l2
subunit {Common earthworm (Lumbricus terrestris)
[TaxId: 6398]}
Length = 41
Score = 46.0 bits (109), Expect = 2e-07
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 32 CDESHFTC-NETLRCIPLAWACDGQPDCGLNDTSDEDHCVND 72
C++ F C CI CDG DC + DED V D
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCH--NAHDEDPDVCD 41
Score = 44.1 bits (104), Expect = 7e-07
Identities = 15/37 (40%), Positives = 16/37 (43%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
CE F C + CI LVCDG C N DE
Sbjct: 2 CEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPD 38
Score = 41.0 bits (96), Expect = 9e-06
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 2 TCIIAYWKCDGDEDCKDGSDELAEHC 27
CI CDG +DC + DE + C
Sbjct: 15 ECISDLLVCDGHKDCHNAHDEDPDVC 40
>d2gtlm2 g.12.1.1 (M:60-101) Hemoglobin linker chain l1 {Common
earthworm (Lumbricus terrestris) [TaxId: 6398]}
Length = 42
Score = 45.6 bits (108), Expect = 2e-07
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Query: 32 CDESHFTC-NETLRCIPLAWACDGQPDCGLNDTSDEDHCV 70
CDE C + CI CDG+ DC D SDED
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCR--DGSDEDPET 40
Score = 44.9 bits (106), Expect = 4e-07
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDE 128
C+ HE +C+ + CI L CDGE C +G DE
Sbjct: 3 CDEHESECRGDVPECIHDLLFCDGEKDCRDGSDE 36
Score = 41.4 bits (97), Expect = 7e-06
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 1 MTCIIAYWKCDGDEDCKDGSDELAEHC 27
CI CDG++DC+DGSDE E C
Sbjct: 15 PECIHDLLFCDGEKDCRDGSDEDPETC 41
>d2fcwb2 g.12.1.1 (B:125-163) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 45.5 bits (108), Expect = 2e-07
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCV 70
C + F CN + CIP WACD PDC D SDE
Sbjct: 3 CGPASFQCNSS-TCIPQLWACDNDPDCE--DGSDEWPQR 38
Score = 43.2 bits (102), Expect = 2e-06
Identities = 14/25 (56%), Positives = 16/25 (64%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHC 27
CI W CD D DC+DGSDE + C
Sbjct: 15 CIPQLWACDNDPDCEDGSDEWPQRC 39
Score = 42.5 bits (100), Expect = 3e-06
Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFC 131
C P F C TCIP+ CD +P C +G DE
Sbjct: 3 CGPASFQCNS--STCIPQLWACDNDPDCEDGSDEWPQ 37
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 45.1 bits (107), Expect = 4e-07
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C+ + CS LC + + G YKCQC +L K C+
Sbjct: 4 CQ-DPDTCSQLC-VNLEGGYKCQCEEGFQLDPHTKACK 39
Score = 44.3 bits (105), Expect = 7e-07
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 175 CEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCK 212
C+ TCSQ C YKC C G++L+P CK
Sbjct: 4 CQDPDTCSQLCVNLE--GGYKCQCEEGFQLDPHTKACK 39
Score = 38.6 bits (90), Expect = 7e-05
Identities = 9/29 (31%), Positives = 10/29 (34%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
C C N G+ C C L P C
Sbjct: 10 CSQLCVNLEGGYKCQCEEGFQLDPHTKAC 38
>d1xfea2 g.12.1.1 (A:1-44) Ligand-binding domain of low-density
lipoprotein receptor {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 44.0 bits (104), Expect = 1e-06
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 3 CIIAYWKCDGDEDCKDGSDELAEHC 27
CI C+ DC+D SDE + C
Sbjct: 19 CITLDKVCNMARDCRDWSDEPIKEC 43
Score = 40.9 bits (96), Expect = 1e-05
Identities = 12/38 (31%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHC 69
+ F C+ CI L C+ DC D SDE
Sbjct: 7 EGPNKFKCHSG-ECITLDKVCNMARDCR--DWSDEPIK 41
Score = 39.8 bits (93), Expect = 3e-05
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
Query: 95 CEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCD 132
P++F C CI VC+ C + DE +
Sbjct: 7 EGPNKFKCHS--GECITLDKVCNMARDCRDWSDEPIKE 42
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 42.9 bits (101), Expect = 2e-06
Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 595 CEMNNGN---CSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C++ G C H C G + C C L + +TC
Sbjct: 4 CQVAPGEAPTCDHHC-HNHLGGFYCSCRAGYVLHRNKRTCS 43
Score = 41.0 bits (96), Expect = 1e-05
Identities = 13/40 (32%), Positives = 15/40 (37%)
Query: 131 CDEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170
C C H C+N GF C C L + TCS
Sbjct: 4 CQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCS 43
Score = 38.7 bits (90), Expect = 6e-05
Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 181 CSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214
C C + + C+C AGY L + TC +
Sbjct: 14 CDHHCHNHL--GGFYCSCRAGYVLHRNKRTCSEQ 45
>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo
sapiens) [TaxId: 9606]}
Length = 42
Score = 42.9 bits (101), Expect = 2e-06
Identities = 14/39 (35%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633
+ + CSH C G Y C CP L D K C V
Sbjct: 4 TDFVDVPCSHFC-NNFIGGYFCSCPPEYFLHDDMKNCGV 41
Score = 38.3 bits (89), Expect = 9e-05
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCK 212
CS C + Y C+C Y L DM C
Sbjct: 9 VPCSHFCNNFI--GGYFCSCPPEYFLHDDMKNCG 40
Score = 36.8 bits (85), Expect = 3e-04
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
C H C N G+ C CP + +L D+ C
Sbjct: 11 CSHFCNNFIGGYFCSCPPEYFLHDDMKNC 39
>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated
serine protease 2, MASP2 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 45
Score = 42.6 bits (100), Expect = 3e-06
Identities = 12/42 (28%), Positives = 15/42 (35%), Gaps = 4/42 (9%)
Query: 595 CEMNNGN---CSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633
C + G+ C H C G Y C C L + TC
Sbjct: 4 CRTSLGDSVPCDHYC-HNYLGGYYCSCRVGYILHQNKHTCSA 44
Score = 40.3 bits (94), Expect = 2e-05
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 131 CDEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170
C C H C+N G+ C C L + TCS
Sbjct: 4 CRTSLGDSVPCDHYCHNYLGGYYCSCRVGYILHQNKHTCS 43
Score = 37.2 bits (86), Expect = 2e-04
Identities = 10/34 (29%), Positives = 13/34 (38%), Gaps = 2/34 (5%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCK 212
C C + Y C+C GY L + TC
Sbjct: 12 VPCDHYCHNYL--GGYYCSCRVGYILHQNKHTCS 43
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 40.6 bits (95), Expect = 2e-05
Identities = 10/38 (26%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C S C + G+Y C CP +L C
Sbjct: 6 CLDPTTCISGNC-VNTPGSYICDCPPDFELNPTRVGCV 42
Score = 36.0 bits (83), Expect = 7e-04
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
+C NTP ++C CP D L P + C
Sbjct: 13 ISGNCVNTPGSYICDCPPDFELNPTRVGC 41
Score = 32.5 bits (74), Expect = 0.010
Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 7/43 (16%)
Query: 169 CSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211
C C S +C + SY C C +EL P C
Sbjct: 6 CLDPTTC-----ISGNCVNTPG--SYICDCPPDFELNPTRVGC 41
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 40.2 bits (94), Expect = 2e-05
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C+ G C I G+++C+CP L D + C
Sbjct: 6 CQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 43
Score = 35.5 bits (82), Expect = 9e-04
Identities = 11/29 (37%), Positives = 11/29 (37%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
C NT F C CP YL D C
Sbjct: 14 QGGKCINTFGSFQCRCPTGYYLNEDTRVC 42
Score = 34.4 bits (79), Expect = 0.002
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 179 GTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211
C + S++C C GY L D C
Sbjct: 12 LCQGGKCINTFG--SFQCRCPTGYYLNEDTRVC 42
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 39.4 bits (92), Expect = 3e-05
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTC 631
C+ + C G+Y+C+CP +L + C
Sbjct: 5 CQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISAC 41
Score = 34.8 bits (80), Expect = 0.002
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITC 169
C+NT + C CP L P++ C
Sbjct: 13 RGGVCHNTEGSYRCECPPGHQLSPNISAC 41
Score = 32.1 bits (73), Expect = 0.013
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 193 SYKCTCHAGYELEPDMFTC 211
SY+C C G++L P++ C
Sbjct: 23 SYRCECPPGHQLSPNISAC 41
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 37.6 bits (87), Expect = 2e-04
Identities = 13/39 (33%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQV 633
E C HLC G Y C C +L D +CQ
Sbjct: 15 EEDPQPQCQHLC-HNYVGGYFCSCRPGYELQEDRHSCQA 52
Score = 37.6 bits (87), Expect = 2e-04
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 6/46 (13%)
Query: 169 CSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTCKSK 214
C C V Y C+C GYEL+ D +C+++
Sbjct: 14 GEEDPQP----QCQHLCHNYVG--GYFCSCRPGYELQEDRHSCQAE 53
Score = 36.9 bits (85), Expect = 5e-04
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 141 CHHDCYNTPEGFMCVCPRDMYLQPDLITCS 170
C H C+N G+ C C LQ D +C
Sbjct: 22 CQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 32.4 bits (74), Expect = 0.011
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKLMSDNKTCQ 632
C+ + C I +G+Y+C+CP L C
Sbjct: 8 CKEPDVCKHGQC-INTDGSYRCECPFGYIL--AGNECV 42
Score = 29.3 bits (66), Expect = 0.12
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 3/27 (11%)
Query: 131 CDEKQCLRSDCHHDCYNTPEGFMCVCP 157
C E H C NT + C CP
Sbjct: 8 CKEPDV---CKHGQCINTDGSYRCECP 31
Score = 26.3 bits (58), Expect = 1.6
Identities = 9/31 (29%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 181 CSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211
C + SY+C C GY L C
Sbjct: 15 KHGQCINTD--GSYRCECPFGYIL--AGNEC 41
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 32.0 bits (73), Expect = 0.013
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 139 SDCHHDCYNTPEGFMCVCPRDMYLQPD 165
C C+N P F C+C D L
Sbjct: 9 GFCSGVCHNLPGTFECICGPDSALAGQ 35
Score = 32.0 bits (73), Expect = 0.013
Identities = 9/33 (27%), Positives = 12/33 (36%), Gaps = 2/33 (6%)
Query: 175 CEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPD 207
CE G CS C +++C C L
Sbjct: 5 CENGGFCSGVCHNLPG--TFECICGPDSALAGQ 35
Score = 29.3 bits (66), Expect = 0.13
Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 598 NNGNCSHLCLIGMNGTYKCQCPHVMKLMSDN-KTC 631
N G CS +C + GT++C C L C
Sbjct: 7 NGGFCSGVC-HNLPGTFECICGPDSALAGQIGTDC 40
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 35.4 bits (80), Expect = 0.024
Identities = 23/191 (12%), Positives = 47/191 (24%), Gaps = 5/191 (2%)
Query: 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAPRIERC 473
L+ ++ I + + +P AI + L D K+
Sbjct: 52 QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 111
Query: 474 SMSGEHRSVIVRVDLLTSRGAWPNGLTLDY---QLTRIYWIDAKSDSIHTVTYDGKDHHV 530
+ + DL S + + D + + + V
Sbjct: 112 ATENGDNLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 169
Query: 531 VLSNHDSLTHPFAIALFENHVYWTDWRTNSVIRANKWNGSDVTLIQRTLTQPFIYVNGVV 590
+ + V W T + + VT+ T P+ +
Sbjct: 170 TPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEG 229
Query: 591 KKSPCEMNNGN 601
S C ++ N
Sbjct: 230 PDSCCIDSDDN 240
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 30.9 bits (70), Expect = 0.039
Identities = 7/38 (18%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 595 CEMNNGNCSHLCLIGMNGTYKCQCPHVMKL-MSDNKTC 631
C ++ C + G ++C+C + K C
Sbjct: 6 CRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
Score = 27.1 bits (60), Expect = 0.90
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 141 CHHDCYNTPEGFMCVCP 157
C NTP F C C
Sbjct: 14 GRGQCVNTPGDFECKCD 30
Score = 26.7 bits (59), Expect = 1.5
Identities = 7/20 (35%), Positives = 9/20 (45%), Gaps = 1/20 (5%)
Query: 193 SYKCTCHAGYEL-EPDMFTC 211
++C C GYE M C
Sbjct: 24 DFECKCDEGYESGFMMMKNC 43
>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 260
Score = 34.4 bits (77), Expect = 0.044
Identities = 29/213 (13%), Positives = 58/213 (27%), Gaps = 27/213 (12%)
Query: 290 VVVQTGLSTAEGLAVDWIGKNLYMFWAFWSLSPSNSSDGGIEKAGMHGENRSPLVTKNIQ 349
V+ GL +GLAVD G + + ++ + P
Sbjct: 50 VLPFNGLYQPQGLAVDGAGTVYVTDFNNRV--VTLAAGSNNQTVLPFDGLNYPEGLAVDT 107
Query: 350 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN- 408
+ V D + + + T + G ++ G+ N R
Sbjct: 108 QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 167
Query: 409 ---------------------LWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPR 447
+ +Y E N +Q+ L + +P
Sbjct: 168 AESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPL 227
Query: 448 AIALDPRFGLLFWTDWDSKAPRIERCSMSGEHR 480
A+A+D ++ D + R+ + + H
Sbjct: 228 AVAVDSD-RTVYVADRGND--RVVKLTSLEHHH 257
Score = 29.8 bits (65), Expect = 1.4
Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Query: 509 YWIDAKSDSIHTVTYDGKDHHVVLSNHDSLTHPFAIALFEN-HVYWTDWRTNSVIR 563
Y + ++ + + V+ L P A+A+ + VY D + V++
Sbjct: 196 YVTEHNTNQVVKLLAGSTTSTVLPFTG--LNTPLAVAVDSDRTVYVADRGNDRVVK 249
>d1ofwa_ a.138.1.1 (A:) Nine-heme cytochrome c {Desulfovibrio
desulfuricans, ATCC 27774 [TaxId: 876]}
Length = 293
Score = 33.0 bits (73), Expect = 0.13
Identities = 19/172 (11%), Positives = 31/172 (18%), Gaps = 4/172 (2%)
Query: 32 CDESHFTCNETLRCIPLAWAC----DGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGN 87
C E C S + + + +
Sbjct: 100 CHEQQTKERRECAGCHAIVTPKRDEAWCATCHNITPSMTPEQMQKGINGTLLPGDNEALA 159
Query: 88 RTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDEKQCLRSDCHHDCYN 147
+ AL EP+ F + ++ +N
Sbjct: 160 AETVLAQKTVEPVSPMLAPYKVVIDALADKYEPSNFTHRRHLTSLMERIKDDKLAQAFHN 219
Query: 148 TPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCH 199
PE C L C H E + + CH
Sbjct: 220 KPEILCATCHHRSPLSLTPPKCGSCHTKEIDKANPGRPNLMAAYHLQCMGCH 271
Score = 32.6 bits (72), Expect = 0.20
Identities = 20/173 (11%), Positives = 34/173 (19%), Gaps = 5/173 (2%)
Query: 32 CDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTH-SGNRTI 90
H T +C + + + C T DE C
Sbjct: 77 DRAMHATNIAKRAKGNTPVSCVSCHEQQTKERRECAGCHAIVTPKRDEAWCATCHNITPS 136
Query: 91 SAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDEKQCLRSDCHHDCYNTPE 150
P + + A M + D D Y
Sbjct: 137 MTPEQMQKGINGTLLPGDNEALAAETVLAQKTVEPVSPMLAPY--KVVIDALADKYEPSN 194
Query: 151 GFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNS-YKCT-CHAG 201
+ + + + C+ S + + KC CH
Sbjct: 195 FTHRRHLTSLMERIKDDKLAQAFHNKPEILCATCHHRSPLSLTPPKCGSCHTK 247
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 33.1 bits (74), Expect = 0.13
Identities = 28/236 (11%), Positives = 65/236 (27%), Gaps = 12/236 (5%)
Query: 349 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSERTVSFNLEVLGSDSRVGIPNCRPEDN 408
+ +L + ++ + + + S+ DG+++ + G + +
Sbjct: 28 TFLENLASAPDGT-IFVTNHEVGEIVSITPDGNQQIHATV---------EGKVSGLAFTS 77
Query: 409 LWIGKNLYWVESNLDQIEVAKLSGQFRRTLIAGDMESPRAIALDPRFGLLFWTDWDSKAP 468
W ++ + + K G L D I L +
Sbjct: 78 NGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIW 137
Query: 469 RIERCSMSGEHRSVIVRVDLLTSRGAWPNGLTLDYQLTRIYWIDAKSDSIHTVTYDGKDH 528
I+ SG + S +P L +Y + + + + D D
Sbjct: 138 LIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDK 197
Query: 529 HVVLSNHDSLTHPFAIALFEN-HVYWTDWRTNSVIRANKWNG-SDVTLIQRTLTQP 582
T+ A ++Y NSV+R + + ++ +
Sbjct: 198 PGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRSTTIIAQAEQGVIGS 253
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 29.3 bits (66), Expect = 0.16
Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
+PCE G C + S++C C GY
Sbjct: 11 NPCEHAGKCIN------TLGSFECQCLQGYT 35
Score = 27.4 bits (61), Expect = 0.76
Identities = 10/28 (35%), Positives = 11/28 (39%), Gaps = 2/28 (7%)
Query: 132 DEKQCLRSDCHHD--CYNTPEGFMCVCP 157
DE + C H C NT F C C
Sbjct: 4 DECSLGANPCEHAGKCINTLGSFECQCL 31
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 28.7 bits (64), Expect = 0.36
Identities = 12/35 (34%), Positives = 13/35 (37%), Gaps = 4/35 (11%)
Query: 169 CSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
SY C G C S +SY C C GY
Sbjct: 8 SSYDGYCLNGGVC----MHIESLDSYTCNCVIGYS 38
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 31.7 bits (70), Expect = 0.38
Identities = 29/270 (10%), Positives = 66/270 (24%), Gaps = 17/270 (6%)
Query: 323 SNSSDGGIE--KAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 380
++ I G V +V+ ++ LY V + R+
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAP 68
Query: 381 SERTVSFNLEVLGSDSRVGIPNCRPEDNLWIGKNLYWVESNLDQIEVAKLSGQFRRTLIA 440
+ ++F E S I +++G S + +
Sbjct: 69 DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG----LPVGVVDVV 124
Query: 441 GDMESPRAIALDPRFGLLFWTDWDSKAPRIERCSMSGEHRSVIVRVDLLTSRGAWPNGLT 500
++ + + P L+ + S G ++ T GA P +
Sbjct: 125 EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLV-AQDPAEVTTVEGAGPRHMV 183
Query: 501 LDYQLTRIYWIDAKSDSIHTVTYDGKDHHVVLS----------NHDSLTHPFAIALFENH 550
Y ++ + S+ ++ + I H
Sbjct: 184 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 243
Query: 551 VYWTDWRTNSVIRANKWNGSDVTLIQRTLT 580
+Y D + + + V +
Sbjct: 244 LYACDRTASLITVFSVSEDGSVLSKEGFQP 273
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 28.1 bits (63), Expect = 0.40
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
+PC G+C NSY+C C G+E
Sbjct: 9 NPCLNGGSCKD------DINSYECWCPFGFE 33
Score = 26.2 bits (58), Expect = 1.7
Identities = 8/28 (28%), Positives = 12/28 (42%), Gaps = 2/28 (7%)
Query: 132 DEKQCLRSDCHHD--CYNTPEGFMCVCP 157
D QC + C + C + + C CP
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCP 29
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 28.1 bits (63), Expect = 0.40
Identities = 10/31 (32%), Positives = 12/31 (38%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
PC+ G C Y CTC G+E
Sbjct: 6 SPCQNQGKCKD------GLGEYTCTCLEGFE 30
Score = 24.7 bits (54), Expect = 7.1
Identities = 6/24 (25%), Positives = 9/24 (37%), Gaps = 2/24 (8%)
Query: 136 CLRSDCHHD--CYNTPEGFMCVCP 157
C S C + C + + C C
Sbjct: 3 CETSPCQNQGKCKDGLGEYTCTCL 26
>d2cvca1 a.138.1.1 (A:40-544) 16-heme cytochrome c HmcA
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 505
Score = 31.7 bits (69), Expect = 0.41
Identities = 22/205 (10%), Positives = 40/205 (19%), Gaps = 11/205 (5%)
Query: 1 MTCIIAYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGL 60
+C+ + C + D +C H +
Sbjct: 308 RSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAP-GFDAKQVEAGALLNLKAEQ 366
Query: 61 NDTSDEDHCVNDCTDWSDETNCTHSGNRTISAPACEPHEFD-CQDVLRTCIPKALVCDGE 119
I + A E + + + + D
Sbjct: 367 RSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPHRKIVKTLIAGIGEDKL 426
Query: 120 PACFNGEDEMFCDEKQCLRSDCHHDCYNTPEGFMCV-CP-RDMYLQPDLITCSYLHPCEA 177
A F+ E C CHH+ + C C + +
Sbjct: 427 AATFHIEKGTLC-------QGCHHNSPASLTPPKCASCHGKPFDADRGDRPGLKAAYHQQ 479
Query: 178 WGTCSQDCEPSVSNNSYKCTCHAGY 202
C + N+ CH
Sbjct: 480 CMGCHDRMKIEKPANTACVDCHKER 504
Score = 28.2 bits (60), Expect = 4.4
Identities = 17/196 (8%), Positives = 36/196 (18%), Gaps = 4/196 (2%)
Query: 6 AYWKCDGDEDCKDGSDELAEHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSD 65
A + E+ + + + +
Sbjct: 206 AGCHAPEAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHKAHEAK 265
Query: 66 EDHCVNDCTDWSDE-TNCTHSGNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFN 124
+ C D T C S D +R+C+ +P C
Sbjct: 266 ANDCRTCHHVRIDTCTACHTVNGTADSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAG 325
Query: 125 GEDEMFCDEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQD 184
+ + CH + L S +
Sbjct: 326 CHGFIKPTKSDAQCGVCHVAAPGFDAKQVEAGAL---LNLKAEQRSQVAASMLSARPQPK 382
Query: 185 CEPSVSNNSYKCTCHA 200
+++ K +
Sbjct: 383 GTFDLNDIPEKVVIGS 398
Score = 27.8 bits (59), Expect = 5.9
Identities = 11/192 (5%), Positives = 31/192 (16%), Gaps = 4/192 (2%)
Query: 26 HCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHS 85
+ + +++ + C+ QP C + +
Sbjct: 291 DSKFVQLEKAMHQPDSMRSCVGCHNTRVQQPTCAGCHGFIKPTKSDAQCGVCHVAAPGFD 350
Query: 86 GNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDEKQCLRSDCHHDC 145
+ + V + + G + +++
Sbjct: 351 AKQVEAGALLNLKAEQRSQVAASMLSARPQPKGTFDLNDIPEKVVIGSIAKEYQPSEFPH 410
Query: 146 YNTPEGFMCVCPRD----MYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAG 201
+ + D + C H C
Sbjct: 411 RKIVKTLIAGIGEDKLAATFHIEKGTLCQGCHHNSPASLTPPKCASCHGKPFDADRGDRP 470
Query: 202 YELEPDMFTCKS 213
C
Sbjct: 471 GLKAAYHQQCMG 482
Score = 27.4 bits (58), Expect = 8.8
Identities = 19/169 (11%), Positives = 39/169 (23%), Gaps = 3/169 (1%)
Query: 28 QDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGN 87
QD +C H + + + + +
Sbjct: 92 QDGECRSCHNPKPSAASSWKEIGFDKSLHYRHVASKAIKPVGDPQKNCGACHHVYDEASK 151
Query: 88 RTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMFCDEKQCLRSDC---HHD 144
+ + E C AL AC + ++ + + +C H
Sbjct: 152 KLVWGKNKEDSCRACHGEKPVDKRPALDTAAHTACISCHMDVAKTKAETGPVNCAGCHAP 211
Query: 145 CYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNNS 193
+ PR QPD + +A +P ++
Sbjct: 212 EAQAKFKVVREVPRLDRGQPDAALILPVPGKDAPREMKGTMKPVAFDHK 260
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 28.0 bits (62), Expect = 0.65
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 592 KSPCEMNNGNCSHLCLIGMNGTYKCQCP 619
K+ C +N G C + + Y C+C
Sbjct: 11 KTFC-VNGGECFMVKDLSNPSRYLCKCQ 37
Score = 26.1 bits (57), Expect = 3.4
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
C G C + + + Y C C G+
Sbjct: 12 TFCVNGGEC-FMVKDLSNPSRYLCKCQPGFT 41
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 27.3 bits (61), Expect = 0.71
Identities = 8/31 (25%), Positives = 11/31 (35%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
PC G C N ++C C G+
Sbjct: 6 SPCLHNGRCLD------KINEFQCECPTGFT 30
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 27.3 bits (61), Expect = 0.75
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
+PC+ TC ++C C GYE
Sbjct: 7 NPCQNDATCLD------QIGEFQCICMPGYE 31
Score = 24.6 bits (54), Expect = 5.7
Identities = 7/24 (29%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 136 CLRSDCHHD--CYNTPEGFMCVCP 157
C+ + C +D C + F C+C
Sbjct: 4 CVSNPCQNDATCLDQIGEFQCICM 27
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 27.0 bits (60), Expect = 0.80
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
PC+ G+C SY C C +E
Sbjct: 8 SPCQNGGSCKD------QLQSYICFCLPAFE 32
Score = 25.8 bits (57), Expect = 2.7
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 132 DEKQCLRSDCHHD--CYNTPEGFMCVCP 157
D QC S C + C + + ++C C
Sbjct: 1 DGDQCASSPCQNGGSCKDQLQSYICFCL 28
>d1n8yc3 g.3.9.1 (C:166-322) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 157
Score = 28.7 bits (62), Expect = 1.8
Identities = 9/134 (6%), Positives = 17/134 (12%)
Query: 52 CDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTHSGNRTISAPACEPHEFDCQDVLRTCIP 111
C + C G + C+
Sbjct: 9 CAPACKDNHCWGESPEDCQILTGTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLA 68
Query: 112 KALVCDGEPACFNGEDEMFCDEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSY 171
+ + + Y + CP +
Sbjct: 69 CLHFNHSGICELHCPALVTYNTDTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLV 128
Query: 172 LHPCEAWGTCSQDC 185
P T
Sbjct: 129 CPPNNQEVTAEDGT 142
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 26.4 bits (58), Expect = 1.9
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
C GTC + ++ + + C C G+
Sbjct: 4 PRCFNGGTC----QQALYFSDFVCQCPEGFA 30
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 26.3 bits (58), Expect = 1.9
Identities = 10/32 (31%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHA-GYE 203
+PC+ G C S + YKC C G+
Sbjct: 7 NPCQNRGECM-----STGFDQYKCDCTRTGFY 33
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 25.9 bits (57), Expect = 2.1
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
C G C + + N+Y C C G+
Sbjct: 7 TSCSGHGECVE------TINNYTCKCDPGFS 31
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 25.9 bits (57), Expect = 2.4
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 6/31 (19%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
C G C + + +Y C+C+ G+
Sbjct: 7 MSCSKQGECLE------TIGNYTCSCYPGFY 31
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 25.9 bits (57), Expect = 2.7
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 6/32 (18%)
Query: 173 HPCEAWGTCSQDCEPSVSNNSYKCTC-HAGYE 203
+PC+ G C + + Y+C C GY
Sbjct: 8 YPCQHQGICVRF-----GLDRYQCDCTRTGYS 34
>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3
Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 145
Score = 27.8 bits (60), Expect = 3.5
Identities = 23/136 (16%), Positives = 30/136 (22%), Gaps = 6/136 (4%)
Query: 67 DHCVNDCTDWSDETNCTHSGNRTISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGE 126
+C + +TI AP C H F A C G
Sbjct: 3 HEVCKGRCWGPGSEDCQ-TLTKTICAPQCNGHCFGPNPNQCCHDECAGGCSGPQDTDCFA 61
Query: 127 DEMFCDEKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCS-----YLHPCEAWGTC 181
F D C+ YN + P Y + S + C
Sbjct: 62 CRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCVASCPHNFVVDQTSCVRAC 121
Query: 182 SQDCEPSVSNNSYKCT 197
D N C
Sbjct: 122 PPDKMEVDKNGLKMCE 137
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 25.2 bits (55), Expect = 4.8
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 4/34 (11%)
Query: 170 SYLHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYE 203
S+ C G C + + Y C C GY
Sbjct: 7 SHDGYCLHDGVC----MYIEALDKYACNCVVGYI 36
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 24.8 bits (54), Expect = 5.2
Identities = 7/22 (31%), Positives = 8/22 (36%), Gaps = 2/22 (9%)
Query: 138 RSDCHHD--CYNTPEGFMCVCP 157
R C C + GF C C
Sbjct: 6 RHQCSVHAECRDYATGFCCRCV 27
Score = 24.0 bits (52), Expect = 9.6
Identities = 10/45 (22%), Positives = 13/45 (28%), Gaps = 9/45 (20%)
Query: 168 TCSY-LHPCEAWGTCSQDCEPSVSNNSYKCTCHAGYELEPDMFTC 211
TC+ H C C + C C A Y + C
Sbjct: 1 TCANNRHQCSVHAECRD------YATGFCCRCVANY--TGNGRQC 37
>d1vava_ b.29.1.18 (A:) Alginate lyase PA1167 {Pseudomonas
aeruginosa [TaxId: 287]}
Length = 222
Score = 27.2 bits (60), Expect = 6.5
Identities = 7/34 (20%), Positives = 12/34 (35%)
Query: 246 SSLKNTIALDFYYTPTANMVFWTDVIDDKIYNAT 279
S L+ D++ + FW V N+
Sbjct: 22 SQLQRDYRSDYFQRTADGIRFWVPVNGSHTRNSE 55
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 27.5 bits (59), Expect = 7.1
Identities = 17/225 (7%), Positives = 43/225 (19%), Gaps = 12/225 (5%)
Query: 25 EHCQDRKCDESHFTCNETLRCIPLAWACDGQPDCGLNDTSDEDHCVNDCTDWSDETNCTH 84
H R + F + L D E + DC +
Sbjct: 109 THTAYRGLTLNWFQPASIRKLEENIRRIAQASVQRLLDFDGECDFMTDCALYYPLHVVMT 168
Query: 85 SGNRT------ISAPACEPHEFDCQDVLRTCIPKALVCDGEPACFNGEDEMF------CD 132
+ + + D P+ + +
Sbjct: 169 ALGVPEDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRFHETIATFYDYFNGFTV 228
Query: 133 EKQCLRSDCHHDCYNTPEGFMCVCPRDMYLQPDLITCSYLHPCEAWGTCSQDCEPSVSNN 192
+++ D + + + H + + S +
Sbjct: 229 DRRSCPKDDVMSLLANSKLDGNYIDDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPE 288
Query: 193 SYKCTCHAGYELEPDMFTCKSKSKNDSSPFVIFSNRHELRGVDLR 237
+ + + S E+RG +++
Sbjct: 289 QLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADTEVRGQNIK 333
>d1m55a_ d.89.1.3 (A:) Replication protein Rep, nuclease domain
{Adeno-associated virus, aav-5 [TaxId: 272636]}
Length = 193
Score = 26.8 bits (59), Expect = 9.8
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 414 NLYWVESNLDQIEVAKLSGQFRRTLIAGDMES 445
L W +NLD+ ++A L+ + R+ L+A +
Sbjct: 161 ELQWAWTNLDEYKLAALNLEERKRLVAQFLAE 192
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.134 0.435
Gapped
Lambda K H
0.267 0.0607 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,274,477
Number of extensions: 160763
Number of successful extensions: 779
Number of sequences better than 10.0: 1
Number of HSP's gapped: 669
Number of HSP's successfully gapped: 216
Length of query: 841
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 748
Effective length of database: 1,130,706
Effective search space: 845768088
Effective search space used: 845768088
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.0 bits)