Query psy14258
Match_columns 440
No_of_seqs 264 out of 2854
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 23:26:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a0p_A LRP6, LRP-6, low-densit 100.0 1.9E-61 6.6E-66 501.6 52.1 370 45-439 5-428 (628)
2 3s94_A LRP-6, low-density lipo 100.0 8.1E-62 2.8E-66 504.0 45.0 372 46-439 9-431 (619)
3 3p5b_L Low density lipoprotein 100.0 1.5E-51 5.1E-56 407.0 38.7 306 1-320 27-351 (400)
4 3m0c_C LDL receptor, low-densi 100.0 1.5E-49 5.2E-54 419.9 38.4 304 2-319 340-662 (791)
5 3v64_C Agrin; beta propeller, 100.0 2.3E-49 7.8E-54 384.6 35.7 287 14-319 1-305 (349)
6 3v65_B Low-density lipoprotein 100.0 1.3E-49 4.3E-54 391.7 33.8 299 2-319 31-348 (386)
7 3s94_A LRP-6, low-density lipo 100.0 8.9E-47 3E-51 391.3 35.9 285 13-316 271-577 (619)
8 4a0p_A LRP6, LRP-6, low-densit 100.0 6.7E-47 2.3E-51 392.5 33.5 290 13-314 264-574 (628)
9 1n7d_A LDL receptor, low-densi 100.0 2.2E-45 7.5E-50 386.5 21.1 304 2-319 322-644 (699)
10 3sov_A LRP-6, low-density lipo 100.0 7.6E-42 2.6E-46 326.9 34.5 255 46-318 4-267 (318)
11 1ijq_A LDL receptor, low-densi 100.0 3.1E-40 1.1E-44 316.1 35.7 259 46-318 1-267 (316)
12 3v65_B Low-density lipoprotein 100.0 1.4E-33 4.9E-38 277.2 32.1 325 12-416 1-347 (386)
13 3p5b_L Low density lipoprotein 100.0 8E-32 2.7E-36 265.8 35.3 324 15-414 1-347 (400)
14 1npe_A Nidogen, entactin; glyc 100.0 3.7E-31 1.3E-35 246.8 32.9 247 46-311 1-261 (267)
15 3m0c_C LDL receptor, low-densi 100.0 2.7E-31 9.4E-36 280.7 34.9 324 14-414 312-659 (791)
16 3v64_C Agrin; beta propeller, 100.0 1.2E-30 4.1E-35 252.9 34.6 238 139-438 40-283 (349)
17 3sov_A LRP-6, low-density lipo 100.0 1E-29 3.6E-34 242.8 32.0 232 146-438 6-246 (318)
18 1ijq_A LDL receptor, low-densi 100.0 1.8E-28 6.2E-33 234.4 35.2 232 146-438 3-246 (316)
19 1npe_A Nidogen, entactin; glyc 100.0 1E-25 3.4E-30 209.9 33.8 253 93-368 2-263 (267)
20 1n7d_A LDL receptor, low-densi 100.0 1.4E-28 4.6E-33 258.8 12.5 322 13-411 293-638 (699)
21 3tc9_A Hypothetical hydrolase; 99.9 2.3E-21 7.7E-26 192.8 30.6 258 131-429 134-429 (430)
22 3tc9_A Hypothetical hydrolase; 99.9 1.5E-21 5.1E-26 194.1 27.0 250 83-386 139-429 (430)
23 3s25_A Hypothetical 7-bladed b 99.9 1.7E-21 5.9E-26 183.9 22.6 198 61-293 89-295 (302)
24 4hw6_A Hypothetical protein, I 99.9 4.3E-21 1.5E-25 190.8 25.1 250 83-386 141-432 (433)
25 4hw6_A Hypothetical protein, I 99.9 1.9E-20 6.6E-25 186.1 28.9 256 132-429 137-432 (433)
26 3hrp_A Uncharacterized protein 99.9 1.6E-19 5.3E-24 178.5 32.8 236 170-429 129-409 (409)
27 3s25_A Hypothetical 7-bladed b 99.9 2.2E-19 7.4E-24 169.5 31.7 258 142-439 23-301 (302)
28 3kya_A Putative phosphatase; s 99.9 2.2E-19 7.6E-24 178.7 32.3 259 131-430 136-475 (496)
29 3fvz_A Peptidyl-glycine alpha- 99.9 5.4E-20 1.8E-24 176.4 26.9 249 131-431 21-323 (329)
30 2qc5_A Streptogramin B lactona 99.9 2E-18 6.9E-23 161.8 35.0 274 131-429 17-299 (300)
31 3kya_A Putative phosphatase; s 99.9 2.5E-19 8.5E-24 178.3 27.9 263 83-388 141-476 (496)
32 3hrp_A Uncharacterized protein 99.8 8E-19 2.7E-23 173.4 30.1 235 131-386 128-409 (409)
33 1rwi_B Serine/threonine-protei 99.8 3.2E-19 1.1E-23 165.2 24.5 237 173-430 25-264 (270)
34 2z2n_A Virginiamycin B lyase; 99.8 2.4E-17 8.2E-22 154.4 35.2 274 131-430 12-295 (299)
35 3fvz_A Peptidyl-glycine alpha- 99.8 2.3E-18 7.8E-23 165.1 27.9 247 78-388 23-323 (329)
36 2qc5_A Streptogramin B lactona 99.8 5.3E-17 1.8E-21 152.1 32.4 269 83-386 22-299 (300)
37 2fp8_A Strictosidine synthase; 99.8 3.3E-17 1.1E-21 156.4 29.3 245 168-432 15-315 (322)
38 1q7f_A NHL, brain tumor CG1071 99.8 1.3E-16 4.5E-21 149.1 31.6 241 131-430 27-280 (286)
39 3dsm_A Uncharacterized protein 99.8 8.1E-17 2.8E-21 154.2 28.7 243 172-437 44-308 (328)
40 1rwi_B Serine/threonine-protei 99.8 1.9E-17 6.4E-22 153.2 23.5 233 135-388 25-265 (270)
41 2z2n_A Virginiamycin B lyase; 99.8 1.5E-15 5.3E-20 142.0 33.5 247 167-436 10-260 (299)
42 2p4o_A Hypothetical protein; p 99.8 5.3E-16 1.8E-20 147.0 27.1 229 172-420 32-279 (306)
43 1q7f_A NHL, brain tumor CG1071 99.7 2.4E-15 8.1E-20 140.5 28.6 237 83-341 32-280 (286)
44 2p4o_A Hypothetical protein; p 99.7 7.9E-15 2.7E-19 138.9 31.3 224 134-376 32-278 (306)
45 2fp8_A Strictosidine synthase; 99.7 4E-15 1.4E-19 141.9 26.8 243 129-392 14-318 (322)
46 3dsm_A Uncharacterized protein 99.7 3.8E-14 1.3E-18 135.6 33.5 245 135-407 45-320 (328)
47 3g4e_A Regucalcin; six bladed 99.7 9.8E-15 3.4E-19 137.6 26.4 194 83-292 15-231 (297)
48 3vgz_A Uncharacterized protein 99.7 2.6E-13 9.1E-18 129.8 35.5 266 83-376 43-334 (353)
49 3a9g_A Putative uncharacterize 99.7 1.8E-14 6.2E-19 139.2 26.2 247 129-387 24-352 (354)
50 3vgz_A Uncharacterized protein 99.7 6.4E-13 2.2E-17 127.1 36.6 266 133-419 40-334 (353)
51 3e5z_A Putative gluconolactona 99.7 1.2E-13 4E-18 129.8 30.4 240 168-431 24-287 (296)
52 2ism_A Putative oxidoreductase 99.7 2.7E-14 9.2E-19 138.0 25.3 230 129-376 26-334 (352)
53 3a9g_A Putative uncharacterize 99.7 9.1E-14 3.1E-18 134.3 28.9 247 165-430 22-352 (354)
54 2ism_A Putative oxidoreductase 99.7 4.2E-14 1.4E-18 136.6 26.2 234 166-419 25-334 (352)
55 3g4e_A Regucalcin; six bladed 99.6 3.5E-13 1.2E-17 126.8 31.3 236 164-419 5-262 (297)
56 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.3E-13 7.8E-18 128.4 29.4 249 168-430 14-299 (314)
57 3u4y_A Uncharacterized protein 99.6 9.5E-13 3.3E-17 125.0 33.8 277 139-432 4-306 (331)
58 3dr2_A Exported gluconolactona 99.6 1.6E-13 5.3E-18 129.8 28.0 244 159-428 33-304 (305)
59 3hfq_A Uncharacterized protein 99.6 1.8E-12 6.1E-17 124.3 33.2 248 170-430 38-317 (347)
60 2dg1_A DRP35, lactonase; beta 99.6 2.2E-12 7.6E-17 122.8 32.5 246 169-430 42-316 (333)
61 3bws_A Protein LP49; two-domai 99.6 1.7E-11 5.7E-16 121.0 39.7 276 134-430 123-432 (433)
62 1l0q_A Surface layer protein; 99.6 2E-11 6.9E-16 118.6 39.4 271 146-437 3-282 (391)
63 2qe8_A Uncharacterized protein 99.6 1.3E-13 4.3E-18 132.8 23.3 245 172-423 17-314 (343)
64 2g8s_A Glucose/sorbosone dehyd 99.6 2.2E-13 7.6E-18 131.6 23.9 247 129-385 13-352 (353)
65 3e5z_A Putative gluconolactona 99.6 1.1E-12 3.8E-17 123.0 26.9 198 211-431 22-247 (296)
66 3u4y_A Uncharacterized protein 99.6 9E-12 3.1E-16 118.3 33.3 275 88-388 5-305 (331)
67 1ri6_A Putative isomerase YBHE 99.6 2.1E-11 7.3E-16 115.7 35.5 272 145-429 5-307 (343)
68 3dr2_A Exported gluconolactona 99.5 4.3E-12 1.5E-16 119.8 28.0 228 129-385 40-304 (305)
69 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 6.3E-12 2.2E-16 118.4 29.0 237 129-388 13-300 (314)
70 2g8s_A Glucose/sorbosone dehyd 99.5 1.8E-12 6.1E-17 125.2 24.8 253 160-428 7-352 (353)
71 1ri6_A Putative isomerase YBHE 99.5 6.9E-11 2.4E-15 112.1 34.8 301 92-412 4-336 (343)
72 2dg1_A DRP35, lactonase; beta 99.5 1.6E-11 5.4E-16 116.9 30.3 241 130-388 41-317 (333)
73 2iwa_A Glutamine cyclotransfer 99.5 3.3E-11 1.1E-15 110.5 29.3 197 217-430 21-237 (266)
74 3hfq_A Uncharacterized protein 99.5 1.1E-10 3.9E-15 111.6 33.0 241 131-386 37-316 (347)
75 2ghs_A AGR_C_1268P; regucalcin 99.5 3.8E-11 1.3E-15 114.5 28.7 189 83-288 51-258 (326)
76 2qe8_A Uncharacterized protein 99.5 8.3E-12 2.8E-16 120.0 23.7 228 134-380 17-314 (343)
77 3scy_A Hypothetical bacterial 99.5 1.9E-10 6.4E-15 110.8 33.2 246 170-430 48-337 (361)
78 1l0q_A Surface layer protein; 99.5 7.2E-10 2.5E-14 107.6 37.3 266 93-389 2-277 (391)
79 3das_A Putative oxidoreductase 99.5 4.1E-11 1.4E-15 114.2 27.4 229 129-375 27-326 (347)
80 1nir_A Nitrite reductase; hemo 99.5 6E-10 2E-14 113.8 37.5 323 87-436 144-520 (543)
81 3das_A Putative oxidoreductase 99.4 1.6E-10 5.6E-15 110.1 30.1 238 166-419 26-327 (347)
82 2ghs_A AGR_C_1268P; regucalcin 99.4 2.6E-10 9E-15 108.6 30.6 236 164-420 41-293 (326)
83 1nir_A Nitrite reductase; hemo 99.4 2.5E-09 8.5E-14 109.2 38.8 333 46-405 148-533 (543)
84 3c75_H MADH, methylamine dehyd 99.4 3E-10 1E-14 111.6 30.6 276 143-437 83-409 (426)
85 2mad_H Methylamine dehydrogena 99.4 2.6E-09 9E-14 103.7 36.7 279 142-436 30-356 (373)
86 2iwa_A Glutamine cyclotransfer 99.4 2.5E-10 8.6E-15 104.7 26.5 197 172-387 21-237 (266)
87 3bws_A Protein LP49; two-domai 99.4 1.7E-09 5.7E-14 106.5 33.9 279 83-387 125-432 (433)
88 3scy_A Hypothetical bacterial 99.4 2.6E-09 8.9E-14 102.7 33.4 281 83-386 4-336 (361)
89 1qks_A Cytochrome CD1 nitrite 99.3 1.4E-08 4.9E-13 103.8 38.2 324 88-436 163-544 (567)
90 3sjl_D Methylamine dehydrogena 99.3 3E-09 1E-13 102.8 31.3 277 140-435 40-368 (386)
91 3sre_A PON1, serum paraoxonase 99.3 1.3E-10 4.6E-15 111.1 21.6 209 162-417 41-284 (355)
92 1cru_A Protein (soluble quinop 99.3 2.3E-10 8E-15 113.9 23.5 288 78-382 26-431 (454)
93 1pby_B Quinohemoprotein amine 99.3 6.8E-09 2.3E-13 98.0 32.8 259 151-436 11-316 (337)
94 3qqz_A Putative uncharacterize 99.3 1.6E-09 5.4E-14 98.8 26.9 199 217-430 27-253 (255)
95 1jof_A Carboxy-CIS,CIS-muconat 99.3 4.3E-09 1.5E-13 101.6 31.3 247 170-431 38-342 (365)
96 3qqz_A Putative uncharacterize 99.3 6.9E-10 2.4E-14 101.2 23.9 195 82-290 28-253 (255)
97 1cru_A Protein (soluble quinop 99.3 5.4E-10 1.8E-14 111.3 24.5 149 129-281 22-249 (454)
98 2p9w_A MAL S 1 allergenic prot 99.3 2E-09 6.7E-14 100.8 26.4 233 168-419 9-304 (334)
99 3nol_A Glutamine cyclotransfer 99.3 3.6E-09 1.2E-13 96.0 27.3 192 219-429 45-255 (262)
100 3mbr_X Glutamine cyclotransfer 99.3 1.3E-08 4.3E-13 91.6 29.6 196 216-430 20-235 (243)
101 3nok_A Glutaminyl cyclase; bet 99.3 3.4E-09 1.2E-13 96.1 25.6 190 219-428 57-264 (268)
102 1jmx_B Amine dehydrogenase; ox 99.3 2E-08 6.9E-13 95.3 32.4 270 139-435 6-330 (349)
103 1qks_A Cytochrome CD1 nitrite 99.2 1.8E-07 6E-12 95.7 40.0 334 46-405 166-557 (567)
104 1jof_A Carboxy-CIS,CIS-muconat 99.2 1.6E-08 5.3E-13 97.7 29.0 247 132-388 38-342 (365)
105 1pby_B Quinohemoprotein amine 99.2 3.2E-08 1.1E-12 93.3 29.6 256 135-417 35-336 (337)
106 1mda_H Methylamine dehydrogena 99.2 2.3E-09 7.8E-14 103.5 21.6 270 143-437 30-353 (368)
107 2oiz_A Aromatic amine dehydrog 99.2 8.2E-08 2.8E-12 92.7 31.4 271 144-431 15-335 (361)
108 3nol_A Glutamine cyclotransfer 99.1 4.7E-08 1.6E-12 88.6 26.6 198 137-386 46-255 (262)
109 2p9w_A MAL S 1 allergenic prot 99.1 1.1E-08 3.8E-13 95.8 22.9 205 214-430 10-265 (334)
110 2mad_H Methylamine dehydrogena 99.1 2.7E-07 9.3E-12 89.4 33.5 284 90-406 30-369 (373)
111 3mbr_X Glutamine cyclotransfer 99.1 5.4E-08 1.9E-12 87.5 25.9 201 136-387 23-235 (243)
112 2oiz_A Aromatic amine dehydrog 99.1 4.2E-07 1.4E-11 87.6 32.9 256 134-411 51-360 (361)
113 3nok_A Glutaminyl cyclase; bet 99.1 6.7E-08 2.3E-12 87.7 23.8 188 174-385 57-264 (268)
114 2wg3_C Hedgehog-interacting pr 99.1 3.7E-08 1.2E-12 97.9 24.1 248 129-384 9-370 (463)
115 1mda_H Methylamine dehydrogena 99.1 5.3E-09 1.8E-13 100.9 17.5 277 92-407 31-365 (368)
116 3c75_H MADH, methylamine dehyd 99.0 1E-07 3.4E-12 93.6 25.9 278 47-389 85-404 (426)
117 2ece_A 462AA long hypothetical 99.0 3.4E-07 1.1E-11 89.3 28.6 224 181-417 93-399 (462)
118 1jmx_B Amine dehydrogenase; ox 99.0 9.6E-07 3.3E-11 83.5 30.2 261 85-388 4-326 (349)
119 1fwx_A Nitrous oxide reductase 99.0 2.3E-08 8E-13 100.7 19.4 266 143-430 100-431 (595)
120 3sre_A PON1, serum paraoxonase 98.9 5.7E-08 1.9E-12 92.9 19.1 191 83-288 52-296 (355)
121 2wg3_C Hedgehog-interacting pr 98.9 3.3E-07 1.1E-11 91.1 24.7 243 77-338 12-370 (463)
122 3no2_A Uncharacterized protein 98.8 3.3E-06 1.1E-10 78.2 27.5 206 151-375 15-231 (276)
123 3sjl_D Methylamine dehydrogena 98.8 3.2E-06 1.1E-10 81.6 27.6 287 47-365 45-383 (386)
124 2ecf_A Dipeptidyl peptidase IV 98.8 5.6E-06 1.9E-10 87.3 32.1 325 83-430 39-459 (741)
125 2ymu_A WD-40 repeat protein; u 98.8 0.00025 8.5E-09 72.0 42.8 310 82-430 223-539 (577)
126 1fwx_A Nitrous oxide reductase 98.8 2E-07 6.9E-12 93.9 17.6 290 91-411 100-456 (595)
127 1gxr_A ESG1, transducin-like e 98.7 0.00016 5.5E-09 67.4 38.0 312 83-428 12-335 (337)
128 3q6k_A 43.2 kDa salivary prote 98.7 3E-05 1E-09 74.4 29.5 245 173-419 27-343 (381)
129 3no2_A Uncharacterized protein 98.7 8.4E-06 2.9E-10 75.3 25.1 227 184-430 5-253 (276)
130 2ojh_A Uncharacterized protein 98.7 1.9E-05 6.6E-10 72.1 27.1 246 151-419 22-292 (297)
131 2ymu_A WD-40 repeat protein; u 98.7 0.00054 1.8E-08 69.4 41.5 305 82-425 264-575 (577)
132 1gxr_A ESG1, transducin-like e 98.7 0.00022 7.4E-09 66.5 34.2 273 83-384 54-334 (337)
133 2ece_A 462AA long hypothetical 98.7 1.8E-05 6.3E-10 77.2 26.9 196 90-289 93-351 (462)
134 3amr_A 3-phytase; beta-propell 98.6 8.7E-06 3E-10 76.9 23.5 191 227-430 39-263 (355)
135 2hqs_A Protein TOLB; TOLB, PAL 98.6 5E-05 1.7E-09 74.4 30.0 222 196-437 159-393 (415)
136 2hqs_A Protein TOLB; TOLB, PAL 98.6 7.1E-05 2.4E-09 73.3 30.4 238 152-409 160-408 (415)
137 1r5m_A SIR4-interacting protei 98.6 0.00017 6E-09 69.5 33.0 318 83-430 48-425 (425)
138 1k32_A Tricorn protease; prote 98.5 0.00025 8.6E-09 77.9 35.0 348 48-430 26-461 (1045)
139 3mkq_A Coatomer beta'-subunit; 98.5 0.00083 2.8E-08 71.2 37.3 275 82-385 15-300 (814)
140 2z3z_A Dipeptidyl aminopeptida 98.5 0.00026 8.8E-09 74.0 32.3 276 134-432 82-437 (706)
141 3pe7_A Oligogalacturonate lyas 98.5 7.2E-05 2.5E-09 71.8 25.7 276 139-430 42-384 (388)
142 1r5m_A SIR4-interacting protei 98.5 0.0008 2.7E-08 64.8 33.3 275 82-387 110-425 (425)
143 1k32_A Tricorn protease; prote 98.5 0.00023 7.8E-09 78.2 32.6 340 62-430 228-637 (1045)
144 3zwl_B Eukaryotic translation 98.5 0.0011 3.7E-08 62.5 39.3 281 129-430 28-346 (369)
145 3pe7_A Oligogalacturonate lyas 98.4 0.00037 1.3E-08 66.7 29.7 278 86-386 41-383 (388)
146 3amr_A 3-phytase; beta-propell 98.4 0.00013 4.3E-09 68.9 24.1 193 46-249 39-264 (355)
147 2ojh_A Uncharacterized protein 98.4 0.00026 8.8E-09 64.4 25.3 218 196-432 22-260 (297)
148 3mkq_A Coatomer beta'-subunit; 98.3 0.0042 1.4E-07 65.7 37.8 281 132-430 12-302 (814)
149 4aez_A CDC20, WD repeat-contai 98.3 0.003 1E-07 60.9 37.3 270 139-430 98-380 (401)
150 2aq5_A Coronin-1A; WD40 repeat 98.3 0.0013 4.4E-08 63.5 30.1 264 151-430 57-342 (402)
151 2ecf_A Dipeptidyl peptidase IV 98.3 0.00052 1.8E-08 72.1 29.0 274 135-430 38-415 (741)
152 3azo_A Aminopeptidase; POP fam 98.3 0.00048 1.7E-08 71.4 27.7 231 181-430 88-369 (662)
153 3c5m_A Oligogalacturonate lyas 98.2 0.00019 6.5E-09 68.9 22.1 274 136-430 38-384 (396)
154 2pm9_A Protein WEB1, protein t 98.2 0.00016 5.4E-09 69.9 21.3 281 83-387 15-337 (416)
155 2ynn_A Coatomer subunit beta'; 98.2 0.0047 1.6E-07 57.2 31.4 276 82-385 15-300 (304)
156 3o4h_A Acylamino-acid-releasin 98.2 0.00033 1.1E-08 71.5 23.3 264 136-430 24-315 (582)
157 3o4h_A Acylamino-acid-releasin 98.1 5.8E-05 2E-09 77.2 17.5 231 174-430 24-275 (582)
158 3hxj_A Pyrrolo-quinoline quino 98.1 0.00086 2.9E-08 62.6 23.6 276 62-386 42-323 (330)
159 3c5m_A Oligogalacturonate lyas 98.1 0.00021 7.1E-09 68.5 19.7 281 86-393 41-390 (396)
160 2z3z_A Dipeptidyl aminopeptida 98.1 0.0044 1.5E-07 64.6 31.1 278 83-389 84-437 (706)
161 1sq9_A Antiviral protein SKI8; 98.1 0.0084 2.9E-07 57.2 33.6 271 139-430 21-395 (397)
162 2pm9_A Protein WEB1, protein t 98.1 0.0016 5.5E-08 62.7 25.4 265 152-430 46-337 (416)
163 4g56_B MGC81050 protein; prote 98.0 0.0042 1.4E-07 59.1 27.4 222 151-388 115-344 (357)
164 3sfz_A APAF-1, apoptotic pepti 98.0 0.031 1E-06 62.2 39.4 341 62-430 639-1034(1249)
165 3q6k_A 43.2 kDa salivary prote 98.0 0.0021 7.2E-08 61.5 23.0 165 82-278 153-342 (381)
166 3azo_A Aminopeptidase; POP fam 98.0 0.0013 4.5E-08 68.0 23.5 229 49-294 94-373 (662)
167 2ynn_A Coatomer subunit beta'; 97.9 0.013 4.4E-07 54.2 36.6 281 133-430 13-302 (304)
168 3sfz_A APAF-1, apoptotic pepti 97.9 0.0037 1.3E-07 69.6 28.2 343 48-430 812-1207(1249)
169 1pgu_A Actin interacting prote 97.9 0.019 6.6E-07 58.1 31.1 274 133-430 18-328 (615)
170 2vdu_B TRNA (guanine-N(7)-)-me 97.9 0.022 7.7E-07 55.7 34.9 237 173-430 104-391 (450)
171 2xyi_A Probable histone-bindin 97.9 0.024 8.1E-07 55.2 29.7 245 171-430 128-410 (430)
172 4ery_A WD repeat-containing pr 97.9 0.017 5.8E-07 53.2 36.4 274 82-383 25-308 (312)
173 1vyh_C Platelet-activating fac 97.9 0.024 8.4E-07 54.8 31.2 271 82-383 110-407 (410)
174 1xfd_A DIP, dipeptidyl aminope 97.8 0.0096 3.3E-07 62.1 27.9 309 83-419 19-430 (723)
175 1xfd_A DIP, dipeptidyl aminope 97.8 0.0026 9E-08 66.4 23.5 285 136-430 19-395 (723)
176 2aq5_A Coronin-1A; WD40 repeat 97.8 0.017 5.9E-07 55.4 27.5 240 174-432 37-301 (402)
177 1pgu_A Actin interacting prote 97.8 0.033 1.1E-06 56.4 30.8 277 83-387 21-328 (615)
178 2vdu_B TRNA (guanine-N(7)-)-me 97.8 0.031 1.1E-06 54.6 35.3 236 135-387 104-393 (450)
179 3i2n_A WD repeat-containing pr 97.8 0.023 7.9E-07 53.0 29.7 280 82-386 20-352 (357)
180 1k8k_C P40, ARP2/3 complex 41 97.8 0.025 8.7E-07 53.1 33.7 273 135-429 10-360 (372)
181 2xdw_A Prolyl endopeptidase; a 97.8 0.054 1.8E-06 56.6 38.3 270 136-425 127-452 (710)
182 3hxj_A Pyrrolo-quinoline quino 97.8 0.0045 1.5E-07 57.6 21.9 255 139-430 66-324 (330)
183 2gop_A Trilobed protease; beta 97.8 0.028 9.5E-07 52.5 28.8 140 135-287 16-206 (347)
184 3zwl_B Eukaryotic translation 97.7 0.028 9.6E-07 52.5 36.8 279 81-387 33-346 (369)
185 4gqb_B Methylosome protein 50; 97.7 0.034 1.2E-06 52.5 32.3 220 151-387 103-331 (344)
186 3ei3_B DNA damage-binding prot 97.7 0.035 1.2E-06 52.7 33.5 279 135-430 75-382 (383)
187 3k26_A Polycomb protein EED; W 97.7 0.032 1.1E-06 52.1 27.8 293 82-385 20-364 (366)
188 3ei3_B DNA damage-binding prot 97.7 0.036 1.2E-06 52.6 31.4 283 82-387 75-382 (383)
189 1vyh_C Platelet-activating fac 97.7 0.041 1.4E-06 53.2 34.5 283 133-427 108-408 (410)
190 4ery_A WD repeat-containing pr 97.7 0.034 1.2E-06 51.1 39.1 276 135-429 25-311 (312)
191 1nr0_A Actin interacting prote 97.7 0.072 2.5E-06 54.5 34.6 317 83-430 21-355 (611)
192 3ow8_A WD repeat-containing pr 97.6 0.039 1.3E-06 51.4 35.4 273 83-384 35-318 (321)
193 2xyi_A Probable histone-bindin 97.6 0.029 9.8E-07 54.6 25.8 240 133-387 128-410 (430)
194 1yfq_A Cell cycle arrest prote 97.6 0.048 1.6E-06 50.5 28.8 239 172-430 12-282 (342)
195 3vl1_A 26S proteasome regulato 97.6 0.061 2.1E-06 51.6 39.8 316 85-430 61-419 (420)
196 1kli_L Factor VIIA; extrinsic 97.5 1.9E-05 6.6E-10 55.9 1.2 35 11-45 2-39 (69)
197 4g56_B MGC81050 protein; prote 97.5 0.06 2.1E-06 50.9 26.2 267 56-342 66-344 (357)
198 2w2n_E LDL receptor, low-densi 97.5 1.8E-05 6E-10 61.7 0.5 43 2-44 57-100 (107)
199 3ow8_A WD repeat-containing pr 97.5 0.064 2.2E-06 49.9 37.5 257 151-428 58-319 (321)
200 1k8k_C P40, ARP2/3 complex 41 97.5 0.068 2.3E-06 50.1 29.9 241 172-430 9-274 (372)
201 4a11_B DNA excision repair pro 97.5 0.079 2.7E-06 50.2 32.9 288 82-388 45-366 (408)
202 3vl1_A 26S proteasome regulato 97.4 0.11 3.6E-06 49.8 33.9 296 62-385 80-417 (420)
203 1sq9_A Antiviral protein SKI8; 97.3 0.11 3.8E-06 49.2 33.1 243 170-435 15-327 (397)
204 1apq_A Complement protease C1R 97.3 7.8E-05 2.7E-09 49.8 2.1 34 12-45 2-45 (53)
205 1yr2_A Prolyl oligopeptidase; 97.3 0.23 7.8E-06 52.0 34.7 279 90-391 116-445 (741)
206 3dm0_A Maltose-binding peripla 97.3 0.23 7.9E-06 51.5 34.1 205 81-294 383-596 (694)
207 2bkl_A Prolyl endopeptidase; m 97.3 0.24 8.1E-06 51.5 29.8 277 139-430 74-397 (695)
208 2bkl_A Prolyl endopeptidase; m 97.3 0.24 8.1E-06 51.5 33.3 282 90-395 77-405 (695)
209 3v9f_A Two-component system se 97.3 0.27 9.1E-06 51.9 37.6 335 62-430 139-524 (781)
210 2xdw_A Prolyl endopeptidase; a 97.3 0.25 8.6E-06 51.4 34.1 276 142-430 81-414 (710)
211 4aez_A CDC20, WD repeat-contai 97.2 0.15 5.2E-06 48.8 35.4 253 62-342 115-381 (401)
212 1yfq_A Cell cycle arrest prote 97.2 0.12 4.2E-06 47.6 27.2 258 135-416 13-310 (342)
213 3odt_A Protein DOA1; ubiquitin 97.2 0.12 4E-06 46.9 33.6 265 135-430 20-296 (313)
214 2ovr_B FBW7, F-BOX/WD repeat p 97.2 0.18 6.1E-06 48.9 37.6 262 139-430 164-442 (445)
215 4gqb_B Methylosome protein 50; 97.2 0.15 5.3E-06 47.9 28.4 237 174-430 85-331 (344)
216 4aow_A Guanine nucleotide-bind 97.2 0.14 4.9E-06 47.1 35.4 284 82-386 40-336 (340)
217 4a5s_A Dipeptidyl peptidase 4 97.2 0.15 5.1E-06 53.5 26.1 117 135-254 16-147 (740)
218 3v9f_A Two-component system se 97.1 0.36 1.2E-05 50.9 38.3 315 82-430 259-611 (781)
219 3mmy_A MRNA export factor; mRN 97.1 0.18 6.1E-06 46.9 31.9 268 134-417 40-334 (368)
220 4a2l_A BT_4663, two-component 97.1 0.4 1.4E-05 50.6 38.6 332 62-430 237-614 (795)
221 2jkh_L Factor X light chain; p 97.1 0.00014 4.8E-09 49.0 1.1 31 15-45 2-34 (55)
222 1got_B GT-beta; complex (GTP-b 97.1 0.2 7E-06 46.7 35.3 270 134-425 56-338 (340)
223 3frx_A Guanine nucleotide-bind 97.0 0.23 7.9E-06 45.9 33.9 281 82-385 19-315 (319)
224 1yr2_A Prolyl oligopeptidase; 97.0 0.49 1.7E-05 49.5 32.2 275 141-430 115-441 (741)
225 3jrp_A Fusion protein of prote 96.9 0.25 8.6E-06 46.1 27.5 254 170-429 10-286 (379)
226 2gop_A Trilobed protease; beta 96.9 0.26 8.9E-06 45.7 27.3 142 135-287 60-250 (347)
227 3odt_A Protein DOA1; ubiquitin 96.9 0.24 8.1E-06 44.9 32.1 236 168-430 15-255 (313)
228 3i2n_A WD repeat-containing pr 96.9 0.27 9.2E-06 45.5 34.4 284 136-430 21-353 (357)
229 3frx_A Guanine nucleotide-bind 96.9 0.27 9.2E-06 45.4 35.8 271 136-429 20-316 (319)
230 1emn_A Fibrillin; extracellula 96.9 0.00056 1.9E-08 50.3 3.0 38 7-44 37-76 (82)
231 3k26_A Polycomb protein EED; W 96.8 0.3 1E-05 45.3 28.4 263 151-429 44-365 (366)
232 4a5s_A Dipeptidyl peptidase 4 96.8 0.61 2.1E-05 48.8 33.7 277 139-430 68-449 (740)
233 3iz6_a 40S ribosomal protein R 96.7 0.42 1.4E-05 45.3 28.4 277 82-388 68-376 (380)
234 4a9v_A PHOX; hydrolase, beta-p 96.7 0.014 4.8E-07 58.4 12.3 108 131-239 381-553 (592)
235 4a9v_A PHOX; hydrolase, beta-p 96.7 0.016 5.3E-07 58.1 12.6 108 170-278 382-550 (592)
236 4e54_B DNA damage-binding prot 96.7 0.46 1.6E-05 45.9 23.5 202 172-387 120-327 (435)
237 1z6c_A Vitamin K-dependent pro 96.6 0.00039 1.3E-08 51.8 0.7 42 2-44 32-77 (87)
238 4a2l_A BT_4663, two-component 96.6 0.92 3.2E-05 47.8 40.5 334 62-430 195-571 (795)
239 1dx5_I Thrombomodulin; serine 96.6 0.00048 1.6E-08 54.6 0.8 43 2-44 68-111 (118)
240 3iuj_A Prolyl endopeptidase; h 96.5 0.93 3.2E-05 47.0 33.2 244 135-395 130-413 (693)
241 2ovr_B FBW7, F-BOX/WD repeat p 96.5 0.63 2.1E-05 45.0 38.6 285 62-387 141-442 (445)
242 1lmj_A Fibrillin 1; EGF, calci 96.5 0.00069 2.3E-08 50.3 1.2 44 2-45 32-80 (86)
243 1kig_L Factor XA; glycoprotein 96.5 0.001 3.4E-08 43.9 1.9 27 19-45 4-31 (51)
244 4e54_B DNA damage-binding prot 96.5 0.22 7.5E-06 48.3 19.7 202 82-295 121-332 (435)
245 3jrp_A Fusion protein of prote 96.5 0.54 1.8E-05 43.7 29.2 239 132-386 10-286 (379)
246 1p22_A F-BOX/WD-repeat protein 96.5 0.67 2.3E-05 44.7 31.4 260 139-430 138-414 (435)
247 1z68_A Fibroblast activation p 96.4 0.73 2.5E-05 47.7 24.5 131 85-235 20-187 (719)
248 1erj_A Transcriptional repress 96.4 0.7 2.4E-05 44.0 37.4 239 174-429 126-388 (393)
249 2pbi_B Guanine nucleotide-bind 96.4 0.67 2.3E-05 43.4 36.8 271 134-425 65-352 (354)
250 4aow_A Guanine nucleotide-bind 96.4 0.6 2E-05 42.7 37.2 275 134-429 39-336 (340)
251 3dm0_A Maltose-binding peripla 96.3 1.2 4E-05 46.0 36.2 275 134-429 383-692 (694)
252 3v7d_B Cell division control p 96.3 0.92 3.1E-05 43.9 36.6 254 151-430 142-421 (464)
253 2w86_A Fibrillin-1, fibrillin1 96.3 0.00086 2.9E-08 55.4 0.5 44 2-45 95-141 (147)
254 1nr0_A Actin interacting prote 96.2 1.3 4.3E-05 45.1 39.4 346 48-429 32-396 (611)
255 2wph_E Coagulation factor IXA 96.2 0.0016 5.5E-08 44.3 1.5 27 19-45 5-33 (59)
256 3dw8_B Serine/threonine-protei 96.2 0.97 3.3E-05 43.3 27.9 121 170-295 176-321 (447)
257 3jro_A Fusion protein of prote 96.2 0.73 2.5E-05 48.3 22.7 254 170-429 8-284 (753)
258 3iuj_A Prolyl endopeptidase; h 96.2 1.5 5.2E-05 45.4 33.8 277 139-430 83-405 (693)
259 1z68_A Fibroblast activation p 96.1 0.2 6.7E-06 52.1 18.1 97 151-254 36-145 (719)
260 3iz6_a 40S ribosomal protein R 96.1 0.95 3.3E-05 42.8 32.4 277 135-430 68-375 (380)
261 2bz6_L Blood coagulation facto 96.0 0.0018 6.2E-08 43.0 1.0 29 17-45 2-33 (53)
262 4a11_B DNA excision repair pro 96.0 1.1 3.6E-05 42.1 29.0 277 135-430 45-365 (408)
263 1emn_A Fibrillin; extracellula 95.9 0.0033 1.1E-07 46.1 2.4 34 10-43 1-36 (82)
264 2pbi_B Guanine nucleotide-bind 95.9 1.1 3.7E-05 41.9 33.9 269 82-381 66-351 (354)
265 3q7m_A Lipoprotein YFGL, BAMB; 95.9 1.2 4E-05 42.0 35.2 252 143-427 102-375 (376)
266 3dwl_C Actin-related protein 2 95.8 0.33 1.1E-05 45.5 16.7 234 135-386 13-280 (377)
267 3dwl_C Actin-related protein 2 95.8 0.39 1.3E-05 45.0 17.2 240 172-429 12-280 (377)
268 3jro_A Fusion protein of prote 95.8 2.1 7.3E-05 44.7 24.4 236 135-386 11-284 (753)
269 3mmy_A MRNA export factor; mRN 95.7 1.3 4.3E-05 40.9 32.0 242 170-430 38-304 (368)
270 1got_B GT-beta; complex (GTP-b 95.6 1.4 4.7E-05 40.8 34.8 240 170-430 54-301 (340)
271 2xzm_R RACK1; ribosome, transl 95.6 1.5 5E-05 40.7 34.8 282 83-385 24-338 (343)
272 3v7d_B Cell division control p 95.5 1.9 6.3E-05 41.7 38.6 257 139-421 167-454 (464)
273 3dw8_B Serine/threonine-protei 95.4 2 6.9E-05 41.0 28.8 157 217-389 178-375 (447)
274 3f1s_B Vitamin K-dependent pro 94.6 0.014 4.7E-07 53.7 2.6 33 13-45 1-36 (283)
275 3gre_A Serine/threonine-protei 94.6 3.2 0.00011 39.5 28.9 260 158-436 50-365 (437)
276 2w2n_E LDL receptor, low-densi 94.6 0.0098 3.3E-07 46.0 1.2 36 8-44 24-61 (107)
277 2xe4_A Oligopeptidase B; hydro 94.5 5.5 0.00019 41.6 23.9 193 83-288 176-398 (751)
278 1x7a_L Coagulation factor IX, 94.4 0.018 6E-07 47.3 2.3 37 8-44 79-118 (146)
279 4gga_A P55CDC, cell division c 94.3 3.8 0.00013 39.1 37.8 272 139-430 110-395 (420)
280 2xzm_R RACK1; ribosome, transl 94.3 3.3 0.00011 38.2 34.8 258 151-429 49-339 (343)
281 3q7m_A Lipoprotein YFGL, BAMB; 94.2 3.6 0.00012 38.5 34.8 172 144-342 143-338 (376)
282 1nzi_A Complement C1S componen 94.2 0.02 7E-07 47.5 2.4 36 9-44 112-150 (159)
283 3fm0_A Protein CIAO1; WDR39,SG 94.1 3.6 0.00012 38.0 31.5 277 139-430 23-335 (345)
284 1erj_A Transcriptional repress 93.9 4.3 0.00015 38.3 32.9 194 219-430 126-341 (393)
285 2bou_A EGF-like module contain 93.9 0.013 4.5E-07 47.8 0.6 38 8-45 90-131 (143)
286 3gre_A Serine/threonine-protei 93.9 4.6 0.00016 38.4 30.3 237 135-388 65-360 (437)
287 3h5c_B Vitamin K-dependent pro 93.8 0.028 9.6E-07 52.5 2.7 38 8-45 36-77 (317)
288 3f3f_A Nucleoporin SEH1; struc 93.6 4 0.00014 36.8 28.0 199 82-291 13-250 (351)
289 4h5i_A Guanine nucleotide-exch 93.4 5.1 0.00018 37.5 22.3 198 218-430 135-343 (365)
290 2xe4_A Oligopeptidase B; hydro 93.3 9 0.00031 40.0 27.7 232 182-428 125-398 (751)
291 3fm0_A Protein CIAO1; WDR39,SG 93.2 5.1 0.00017 37.0 31.0 283 82-387 18-335 (345)
292 2bou_A EGF-like module contain 93.2 0.053 1.8E-06 44.1 3.1 38 7-44 37-79 (143)
293 3f3f_A Nucleoporin SEH1; struc 93.0 5 0.00017 36.1 31.0 248 170-431 10-338 (351)
294 2oaj_A Protein SNI1; WD40 repe 92.9 11 0.00039 40.1 23.7 195 218-429 19-241 (902)
295 1aut_L Activated protein C; se 92.6 0.053 1.8E-06 42.3 2.3 38 8-45 45-87 (114)
296 1lmj_A Fibrillin 1; EGF, calci 92.6 0.061 2.1E-06 39.5 2.5 33 12-44 1-36 (86)
297 1p22_A F-BOX/WD-repeat protein 92.5 7.6 0.00026 37.0 30.6 267 83-388 136-415 (435)
298 1nfu_B Coagulation factor XA, 92.0 0.038 1.3E-06 47.5 0.8 38 8-45 73-114 (195)
299 3zwu_A Alkaline phosphatase PH 92.0 1.8 6.1E-05 43.8 13.1 67 170-237 382-495 (592)
300 1z6c_A Vitamin K-dependent pro 92.0 0.076 2.6E-06 39.1 2.3 34 12-45 1-37 (87)
301 4ggc_A P55CDC, cell division c 91.9 6.6 0.00023 35.0 37.5 271 139-429 30-314 (318)
302 2vh0_B Activated factor XA lig 91.6 0.046 1.6E-06 44.0 0.8 38 8-45 73-114 (134)
303 3zwu_A Alkaline phosphatase PH 91.2 3 0.0001 42.2 13.8 104 131-235 381-549 (592)
304 2oaj_A Protein SNI1; WD40 repe 91.2 18 0.00061 38.6 22.0 192 83-292 20-244 (902)
305 1z1y_A Ookinete surface protei 90.8 0.082 2.8E-06 45.1 1.7 44 2-45 32-86 (186)
306 3vu4_A KMHSV2; beta-propeller 90.5 11 0.00037 34.9 30.2 234 172-430 20-271 (355)
307 2kl7_A Fibulin-4; secreted, ca 90.5 0.11 3.6E-06 36.7 1.7 33 12-44 1-38 (71)
308 1dx5_I Thrombomodulin; serine 90.4 0.12 4E-06 40.6 2.1 33 12-45 2-36 (118)
309 1uzk_A Fibrillin-1; glycoprote 90.2 0.097 3.3E-06 43.5 1.6 34 12-45 1-36 (162)
310 2oit_A Nucleoporin 214KDA; NH2 89.9 14 0.00049 35.4 19.9 138 135-275 94-255 (434)
311 2vj3_A Neurogenic locus notch 89.7 0.16 5.5E-06 40.7 2.4 34 10-43 1-38 (135)
312 2c4f_L Coagulation factor VII 89.2 0.16 5.4E-06 41.2 2.1 38 8-45 78-122 (142)
313 2ad6_A Methanol dehydrogenase 89.2 20 0.00067 36.0 23.6 67 228-295 62-139 (571)
314 3u7u_G Neuregulin 1; signaling 88.9 0.3 1E-05 32.3 2.9 36 9-45 2-46 (55)
315 1gl4_A Nidogen-1, entactin; im 87.8 0.11 3.7E-06 47.1 0.2 34 12-45 3-40 (285)
316 1yo8_A Thrombospondin-2; EGF, 87.7 0.38 1.3E-05 48.9 4.1 42 2-44 33-82 (634)
317 1edm_B Factor IX; epidermal gr 87.6 0.22 7.6E-06 30.1 1.5 30 13-43 2-34 (39)
318 3lrv_A PRE-mRNA-splicing facto 85.9 20 0.0007 32.6 31.7 156 218-387 127-292 (343)
319 1x7a_L Coagulation factor IX, 85.7 0.36 1.2E-05 39.3 2.2 34 9-43 43-79 (146)
320 1tl2_A L10, protein (tachylect 84.7 1.7 5.8E-05 38.0 6.1 68 355-428 40-114 (236)
321 2wph_E Coagulation factor IXA 84.7 0.64 2.2E-05 31.2 2.7 27 2-32 28-55 (59)
322 2k2s_B Micronemal protein 6; m 84.0 0.21 7.1E-06 33.9 0.0 32 10-42 7-43 (61)
323 2w86_A Fibrillin-1, fibrillin1 82.9 0.41 1.4E-05 38.9 1.4 33 12-45 2-36 (147)
324 1egf_A Epidermal growth factor 82.6 0.77 2.6E-05 30.0 2.4 32 13-44 2-40 (53)
325 1yo8_A Thrombospondin-2; EGF, 82.1 0.75 2.6E-05 46.8 3.3 37 7-43 95-139 (634)
326 4h5i_A Guanine nucleotide-exch 82.0 32 0.0011 31.8 34.7 196 172-386 134-342 (365)
327 3ott_A Two-component system se 81.2 53 0.0018 33.9 29.1 228 172-430 22-260 (758)
328 1kb0_A Quinohemoprotein alcoho 81.1 52 0.0018 33.7 32.7 16 359-374 396-411 (677)
329 4d90_A EGF-like repeat and dis 80.0 0.7 2.4E-05 37.2 1.8 37 8-45 90-130 (143)
330 2bz6_L Blood coagulation facto 79.5 0.83 2.8E-05 29.8 1.7 18 2-19 28-46 (53)
331 1tl2_A L10, protein (tachylect 79.5 31 0.0011 30.1 17.2 107 168-285 37-158 (236)
332 1nfu_B Coagulation factor XA, 79.4 0.38 1.3E-05 41.2 0.0 34 9-43 37-73 (195)
333 1aut_L Activated protein C; se 77.8 0.94 3.2E-05 34.9 1.9 35 10-44 2-46 (114)
334 2ad6_A Methanol dehydrogenase 77.5 61 0.0021 32.4 32.4 75 221-295 239-340 (571)
335 2pm7_B Protein transport prote 77.4 38 0.0013 30.0 26.1 201 218-430 11-238 (297)
336 2c4f_L Coagulation factor VII 76.9 0.6 2E-05 37.7 0.5 34 9-43 42-78 (142)
337 2j04_B YDR362CP, TAU91; beta p 74.5 69 0.0024 31.5 25.7 265 151-432 235-519 (524)
338 1kig_L Factor XA; glycoprotein 74.3 1.4 4.9E-05 28.4 1.7 19 1-19 25-44 (51)
339 3bg1_A Protein SEC13 homolog; 73.2 51 0.0018 29.5 26.2 113 135-249 15-137 (316)
340 2vh0_B Activated factor XA lig 71.8 0.79 2.7E-05 36.6 0.0 34 9-43 37-73 (134)
341 2hes_X YDR267CP; beta-propelle 71.5 58 0.002 29.3 28.9 223 62-291 36-281 (330)
342 3vu4_A KMHSV2; beta-propeller 70.3 65 0.0022 29.4 30.5 221 83-342 22-272 (355)
343 2jkh_L Factor X light chain; p 69.4 2.1 7.3E-05 28.0 1.7 19 1-19 28-47 (55)
344 3lrv_A PRE-mRNA-splicing facto 69.4 65 0.0022 29.1 27.0 155 263-430 128-292 (343)
345 2hes_X YDR267CP; beta-propelle 68.8 66 0.0023 28.9 31.6 275 139-429 19-327 (330)
346 1flg_A Protein (quinoprotein e 67.8 1E+02 0.0035 30.8 15.6 15 221-235 416-430 (582)
347 2j04_B YDR362CP, TAU91; beta p 67.7 98 0.0033 30.4 21.0 232 183-429 172-427 (524)
348 1kli_L Factor VIIA; extrinsic 66.6 2.6 8.7E-05 29.2 1.7 19 1-19 33-52 (69)
349 4gga_A P55CDC, cell division c 63.4 97 0.0033 28.9 33.7 261 48-341 118-395 (420)
350 2pm7_B Protein transport prote 63.4 79 0.0027 27.8 30.5 252 171-429 9-284 (297)
351 3b7f_A Glycosyl hydrolase, BNR 62.0 1E+02 0.0035 28.7 18.9 186 48-248 24-262 (394)
352 2vj3_A Neurogenic locus notch 60.7 4.9 0.00017 31.7 2.7 35 9-44 39-77 (135)
353 1kv9_A Type II quinohemoprotei 58.9 1.6E+02 0.0054 29.9 22.6 31 264-295 111-141 (668)
354 1nt0_A MAsp2, mannose-binding 58.3 3.9 0.00013 37.1 1.9 33 13-45 119-156 (286)
355 1kv9_A Type II quinohemoprotei 56.8 1.7E+02 0.0059 29.6 18.7 29 266-295 465-493 (668)
356 1tpg_A T-plasminogen activator 55.5 4.8 0.00016 29.4 1.6 33 10-43 42-81 (91)
357 1uzk_A Fibrillin-1; glycoprote 53.6 1.3 4.5E-05 36.5 -2.0 42 2-43 31-85 (162)
358 1cz6_A Protein (androctonin); 53.0 4.5 0.00015 20.9 0.7 22 10-31 3-24 (26)
359 1yiq_A Quinohemoprotein alcoho 52.6 2E+02 0.007 29.2 22.5 31 264-295 115-145 (689)
360 1z1y_A Ookinete surface protei 50.3 6.7 0.00023 32.9 1.9 33 2-36 123-162 (186)
361 1k36_A Epiregulin; EGF-like fo 49.6 6.8 0.00023 24.5 1.4 32 13-44 2-39 (46)
362 2zux_A YESW protein; beta-prop 48.9 2E+02 0.0068 28.7 12.2 143 97-251 257-426 (591)
363 1w6s_A Methanol dehydrogenase 48.7 2.2E+02 0.0075 28.5 23.4 67 228-295 62-145 (599)
364 3dem_A Complement factor MAsp- 47.5 8 0.00028 34.7 2.1 34 12-45 119-157 (278)
365 1yiq_A Quinohemoprotein alcoho 44.9 2.7E+02 0.0091 28.3 19.3 28 267-295 483-510 (689)
366 1a3p_A Epidermal growth factor 42.7 18 0.00061 22.2 2.6 18 26-43 16-36 (45)
367 3b7f_A Glycosyl hydrolase, BNR 42.4 2.1E+02 0.0071 26.4 28.1 245 172-432 55-374 (394)
368 2oit_A Nucleoporin 214KDA; NH2 41.9 2.3E+02 0.0078 26.7 20.9 122 83-209 95-227 (434)
369 2zuy_A YESX protein; beta-prop 40.9 2.9E+02 0.01 27.7 12.7 119 153-277 274-411 (620)
370 3sbq_A Nitrous-oxide reductase 40.3 84 0.0029 31.5 8.1 89 339-429 303-407 (638)
371 3bg1_A Protein SEC13 homolog; 39.8 2E+02 0.0067 25.4 22.8 251 172-429 14-292 (316)
372 4d90_A EGF-like repeat and dis 37.5 17 0.00058 28.6 2.4 33 10-43 48-90 (143)
373 1kb0_A Quinohemoprotein alcoho 34.7 3.8E+02 0.013 27.1 34.5 74 221-295 247-351 (677)
374 3h5c_B Vitamin K-dependent pro 34.5 16 0.00054 33.4 1.9 31 12-43 3-36 (317)
375 4gq1_A NUP37; propeller, trans 33.9 2.8E+02 0.0095 25.4 20.7 208 218-430 138-389 (393)
376 2zuy_A YESX protein; beta-prop 27.2 3.8E+02 0.013 26.9 10.3 105 125-236 284-412 (620)
377 4ggc_A P55CDC, cell division c 27.1 3E+02 0.01 23.6 32.5 259 48-339 38-313 (318)
378 4gq1_A NUP37; propeller, trans 23.1 4.3E+02 0.015 24.0 21.3 50 61-111 167-217 (393)
379 1w6s_A Methanol dehydrogenase 22.8 5.7E+02 0.02 25.4 33.2 75 221-295 245-347 (599)
380 1n1i_A Merozoite surface prote 22.0 38 0.0013 25.3 1.7 40 2-42 39-84 (105)
381 3f6k_A Sortilin; protein sorti 20.9 6.7E+02 0.023 25.5 23.3 194 175-392 93-311 (685)
382 1flg_A Protein (quinoprotein e 20.1 6.3E+02 0.022 24.9 25.1 66 228-295 68-141 (582)
No 1
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=1.9e-61 Score=501.56 Aligned_cols=370 Identities=21% Similarity=0.398 Sum_probs=326.5
Q ss_pred cceeEEEEeecccceeeeEEEecCCCcee--eeee-cccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeec
Q psy14258 45 GVKTHLYETIEAFWEECFGPMDIEEWDEG--LSFL-TFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTK 121 (440)
Q Consensus 45 ~~~~ll~s~~~~~~~~~I~~~~l~~~~~~--~~~~-~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~ 121 (440)
++|||+|++++. |+++++++.... +++. +.+ +.|||||+.+++|||+|...++|+++.++++..+.
T Consensus 5 p~~~Ll~s~~~~-----I~~i~l~~~~~~~~~~~~~~~~--~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~---- 73 (628)
T 4a0p_A 5 PEAFLLFSRRAD-----IRRISLETNNNNVAIPLTGVKE--ASALDFDVTDNRIYWTDISLKTISRAFMNGSALEH---- 73 (628)
T ss_dssp CCCEEEEEETTE-----EEEEESSCTTCEEECCCCSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE----
T ss_pred CCcEEEEEeCCc-----EEEEECCCCCcceEEEcCCCCc--eEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEE----
Confidence 378999999999 999999987654 3332 455 99999999999999999999999999998876443
Q ss_pred cccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCC
Q psy14258 122 WGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRP 196 (440)
Q Consensus 122 ~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~ 196 (440)
++..++..|.| |+||.+++|||+ ++|++++++|+.+++++...+..|++||+||.+|+|||||++.. +
T Consensus 74 ------v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~-~ 146 (628)
T 4a0p_A 74 ------VVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGK-P 146 (628)
T ss_dssp ------EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSS-C
T ss_pred ------EEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCC-C
Confidence 24557789999 999999999999 78999999999999998888999999999999999999999854 8
Q ss_pred cEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEE
Q psy14258 197 MLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVT 276 (440)
Q Consensus 197 ~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~t 276 (440)
+|+|++|||+.++.++. .+.+|+||++|+.+++|||+|...++|++++++|+.++++... +.+|+||++++++||||
T Consensus 147 ~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~--l~~P~glav~~~~ly~t 223 (628)
T 4a0p_A 147 KIDRAAMDGSERTTLVP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADD--LPHPFGLTQYQDYIYWT 223 (628)
T ss_dssp EEEEEETTSCSCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC--CSCEEEEEEETTEEEEE
T ss_pred EEEEEeCCCCceEEEEC-CCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeecc--CCCceEEEEECCEEEEe
Confidence 99999999999988874 7899999999999999999999999999999999999766554 88999999999999999
Q ss_pred ecCCCeEEEEeccCCCceEEEe-cCCCCeEEEEeccCCCCCCC-------------------------------------
Q psy14258 277 SWRNQSIIRVNKFNSDDYETIA-NFSRPFAIHIYHRQKQPDAL------------------------------------- 318 (440)
Q Consensus 277 d~~~~~i~~~~~~~g~~~~~~~-~~~~p~~~~v~~~~~qp~~~------------------------------------- 318 (440)
||.++.|.++++.+|+..+++. ++..|++|+++|+.+||...
T Consensus 224 D~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~ 303 (628)
T 4a0p_A 224 DWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRT 303 (628)
T ss_dssp ETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSC
T ss_pred cCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCc
Confidence 9999999999999999888665 56689999999999997543
Q ss_pred --CCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEEC
Q psy14258 319 --KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDT 396 (440)
Q Consensus 319 --~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~ 396 (440)
.++.||+++.. ..|+++.++.. ...+..+|+.++.++.+|+||+.+++|||+|...++|+|++++|+..+.++..
T Consensus 304 C~~~~~~Ll~s~~--~~i~~i~l~~~-~~~~~~l~~~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~ 380 (628)
T 4a0p_A 304 CSAPTTFLLFSQK--SAINRMVIDEQ-QSPDIILPIHSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVS 380 (628)
T ss_dssp EECCSSEEEEEET--TEEEEECCCTT-CCCCEECCCTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-
T ss_pred Cccccceeeeecc--ceEEEEecccc-cCceEEEEehhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEc
Confidence 23578999887 89999999876 34456788889999999999999999999999999999999999887766654
Q ss_pred ------CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCeeeEEeee
Q psy14258 397 ------GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDFSIRKVLYK 439 (440)
Q Consensus 397 ------~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~~l~~ 439 (440)
++..|+|||+||++++|||||...++|++++++| +.+++|+.
T Consensus 381 ~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~G-~~~~~l~~ 428 (628)
T 4a0p_A 381 SVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLDG-RSVGVVLK 428 (628)
T ss_dssp -------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CEEEEEEE
T ss_pred ccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECCC-CeEEEEEe
Confidence 5778999999999999999999999999999999 77888765
No 2
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=8.1e-62 Score=503.99 Aligned_cols=372 Identities=27% Similarity=0.533 Sum_probs=319.1
Q ss_pred ceeEEEEeecccceeeeEEEecCCCc--eeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeecc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWD--EGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKW 122 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~--~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~ 122 (440)
.|.||+++++. |+++++++.. .++.. .+.+ +.|||||+.+++|||+|...++|+++.+++....
T Consensus 9 ~~~~~~~~~~~-----I~~i~~~~~~~~~~~~~~~~~~--~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~------ 75 (619)
T 3s94_A 9 APLLLYANRRD-----LRLVDATNGKENATIVVGGLED--AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV------ 75 (619)
T ss_dssp -CCEEEECSSB-----EEEECCC---------CBCCSC--EEEEEEETTTTEEEEEETTTTEEEEEEC-----C------
T ss_pred CceEEEecccc-----EEEEeCCCCcceEEEEEcCCCc--eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce------
Confidence 68999999999 9999999864 44444 3666 9999999999999999999999999999876321
Q ss_pred ccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCc
Q psy14258 123 GATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPM 197 (440)
Q Consensus 123 ~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~ 197 (440)
+.++..++..|.| |+||.+++|||+ ++|++++++|+.+++++...+..|++||+||.+|+|||||++.. ++
T Consensus 76 ---~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~-~~ 151 (619)
T 3s94_A 76 ---QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PK 151 (619)
T ss_dssp ---EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSS-CE
T ss_pred ---EEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCC-CE
Confidence 1235567889999 999999999999 79999999999999998888999999999999999999999865 89
Q ss_pred EEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEe
Q psy14258 198 LERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 198 I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td 277 (440)
|+|+++||+.+++++...+.+|+||++|+.+++|||+|...++|++++++|+.++.+..+. +.+|+||++++++|||||
T Consensus 152 I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~-~~~P~gi~~~~~~ly~td 230 (619)
T 3s94_A 152 IERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTD 230 (619)
T ss_dssp EEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC----------CCCEEESSSEEEEEC
T ss_pred EEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCC-CCCceEEEEeCCEEEEec
Confidence 9999999999999998889999999999999999999999999999999999988887643 889999999999999999
Q ss_pred cCCCeEEEEeccCCCceEEEe-cCCCCeEEEEeccCCCCCCC--------------------------------------
Q psy14258 278 WRNQSIIRVNKFNSDDYETIA-NFSRPFAIHIYHRQKQPDAL-------------------------------------- 318 (440)
Q Consensus 278 ~~~~~i~~~~~~~g~~~~~~~-~~~~p~~~~v~~~~~qp~~~-------------------------------------- 318 (440)
|.+++|+++++.+|+...++. ....|++++++|+.+||...
T Consensus 231 ~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~ 310 (619)
T 3s94_A 231 WSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGK 310 (619)
T ss_dssp TTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSS
T ss_pred CCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCc
Confidence 999999999999998887654 56689999999999998432
Q ss_pred ----CCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE
Q psy14258 319 ----KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI 394 (440)
Q Consensus 319 ----~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~ 394 (440)
.++.||+++.. +.|++++++.. ..+...+|+.++.+|.+||||+.+++|||+|...++|+|++++|+..++++
T Consensus 311 ~C~~~~~~~Ll~~~~--~~i~~i~l~~~-~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~ 387 (619)
T 3s94_A 311 TCKDGATELLLLARR--TDLRRISLDTP-DFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVV 387 (619)
T ss_dssp CBCSSCSEEEEEEES--SCEEEEESSST-TCCCEECCCSCCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ccCCCCceEEEEEcc--cceEEEecCCC-ccceeEEeccccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEE
Confidence 13478999887 89999999987 455667888899999999999999999999999999999999999889998
Q ss_pred ECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCeeeEEeee
Q psy14258 395 DTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDFSIRKVLYK 439 (440)
Q Consensus 395 ~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~~l~~ 439 (440)
..++..|+||||||++++|||||.+.++|++++++| +.+++|+.
T Consensus 388 ~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G-~~~~~l~~ 431 (619)
T 3s94_A 388 TAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNG-TMRKILIS 431 (619)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEEC
T ss_pred ECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCC-CeEEEEEE
Confidence 888999999999999999999999999999999999 77888764
No 3
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=1.5e-51 Score=406.95 Aligned_cols=306 Identities=24% Similarity=0.428 Sum_probs=268.1
Q ss_pred CceecCCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeeec----------ceeEEEEeecccceeeeEEEecCC
Q psy14258 1 MTFRGPNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQG----------VKTHLYETIEAFWEECFGPMDIEE 69 (440)
Q Consensus 1 ~~~~~~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~~----------~~~ll~s~~~~~~~~~I~~~~l~~ 69 (440)
.||++.++++|+|++||..++.|+|.|.|++++|.|. .+||.+.+ .|+|++++++. |+++++++
T Consensus 27 ~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~~~~~ll~~~~~~-----I~~i~l~~ 101 (400)
T 3p5b_L 27 DGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE-----VRKMTLDR 101 (400)
T ss_dssp TTEEECSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCSTTSCEEEEEETTE-----EEEECTTS
T ss_pred CCCCcCCCCcccCchhhhccCCCCCccCCCccceeeeccccccccccccceeeccccceeEEeccce-----eEEEccCC
Confidence 3677778899999999998889999999999999999 99999764 78999999999 99999998
Q ss_pred Cceeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcE
Q psy14258 70 WDEGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKI 147 (440)
Q Consensus 70 ~~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~l 147 (440)
...+..+ .+.. +.|||||+.+++|||+|...++|+++.+++.... .....++...+..|.| |+||.+++|
T Consensus 102 ~~~~~~~~~~~~--~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~------~~~~~~~~~~~~~p~glavD~~~~~l 173 (400)
T 3p5b_L 102 SEYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDTVISRDIQAPDGLAVDWIHSNI 173 (400)
T ss_dssp CSCEEEECSCSC--EEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCEEEECSSCSCEEEEEEETTTTEE
T ss_pred cceeEeccccCc--ceEEeeeeccCceEEEecCCCeEEEEEcccCCCC------CcceEEEeCCCCCcccEEEEecCCce
Confidence 8777333 3556 9999999999999999999999999998864310 0112234557889999 999999999
Q ss_pred EEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEE
Q psy14258 148 VYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVT 223 (440)
Q Consensus 148 Y~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~ 223 (440)
||+ ++|++++++|+.+++++...+..|++||+||..|+|||||++.. ++|+|+++||+.++.++...+.+|+||+
T Consensus 174 Y~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~-~~I~~~~~dG~~~~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 174 YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGIT 252 (400)
T ss_dssp EEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSS-CCEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCC-CEEEEEeCCCCccEEEEECCCCceEEEE
Confidence 999 79999999999999998888999999999999999999999865 7999999999999999888899999999
Q ss_pred EeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-CccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe-cCC
Q psy14258 224 VDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG-FPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA-NFS 301 (440)
Q Consensus 224 vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~-~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~-~~~ 301 (440)
+|+.+++|||+|...++|++++++|+.++++... ..+.+|+||+++++.|||+||.+++|+++++.+|+...++. ++.
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~ 332 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLL 332 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCS
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCC
Confidence 9999999999999999999999999999888763 34789999999999999999999999999999998887554 667
Q ss_pred CCeEEEEeccCCCCCCCCC
Q psy14258 302 RPFAIHIYHRQKQPDALKP 320 (440)
Q Consensus 302 ~p~~~~v~~~~~qp~~~~~ 320 (440)
.|++++++|+.+||.+.+|
T Consensus 333 ~p~~i~v~~~~~qp~~~n~ 351 (400)
T 3p5b_L 333 SPEDMVLFHNLTQPRGVNW 351 (400)
T ss_dssp CEEEEEEESGGGSCCCCCS
T ss_pred CCceEEEEeeccCCCCCCc
Confidence 8999999999999966543
No 4
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.5e-49 Score=419.93 Aligned_cols=304 Identities=24% Similarity=0.437 Sum_probs=268.1
Q ss_pred ceecCCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeeec----------ceeEEEEeecccceeeeEEEecCCC
Q psy14258 2 TFRGPNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQG----------VKTHLYETIEAFWEECFGPMDIEEW 70 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~~----------~~~ll~s~~~~~~~~~I~~~~l~~~ 70 (440)
||++.++++|+|++||..++.|+|.|.|++++|+|. .+||.+.+ .++|++++.+. |+++++++.
T Consensus 340 Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~~~p~Ll~an~~~-----Ir~i~l~~~ 414 (791)
T 3m0c_C 340 GFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE-----VRKMTLDRS 414 (791)
T ss_dssp TCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETTSCCEEEEECBSS-----EEEECTTSC
T ss_pred CCccCCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCEeCCCCceeeecccccccccccccc-----eeEeeccCC
Confidence 666667899999999998899999999999999999 99999854 68999999999 999999988
Q ss_pred cee-eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEE
Q psy14258 71 DEG-LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIV 148 (440)
Q Consensus 71 ~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY 148 (440)
.+. +...+.. +.||+||+.+++|||+|...++|+++.+++..... ....++...+..|.| ||||++++||
T Consensus 415 ~~~~l~~~~~~--~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~------~~~~vi~~~l~~P~GLAvD~~~~~LY 486 (791)
T 3m0c_C 415 EYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS------SYDTVISRDIQAPDGLAVDWIHSNIY 486 (791)
T ss_dssp CCEEEECSCSS--EEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEE
T ss_pred cceeeecCCCc--eEEEeecccCCeeEEeeccceeEEEEeccCCCCCc------ceeEEEecCCCCcceeeeeecCCcEE
Confidence 776 4334566 99999999999999999999999999998753211 122335568899999 9999999999
Q ss_pred Ee----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEE
Q psy14258 149 YP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTV 224 (440)
Q Consensus 149 ~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~v 224 (440)
|+ ++|++++++|+.+++++...+..|++|||||.+|+|||||++.. ++|++++|||+.+++++...+.+|+||+|
T Consensus 487 ~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~-~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 487 WTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp EEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred EEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCC-CeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 99 79999999999999999888999999999999999999999875 69999999999999999888999999999
Q ss_pred eCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-CccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE-ecCCC
Q psy14258 225 DFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG-FPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI-ANFSR 302 (440)
Q Consensus 225 D~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~-~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~-~~~~~ 302 (440)
|+.+++|||+|.+.++|++++++|+.++++... ..+.+|+||++++++|||+||.+++|+++++.+|+...++ ..+..
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~ 645 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLS 645 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSC
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCC
Confidence 999999999999999999999999999988763 3488999999999999999999999999999999888765 46779
Q ss_pred CeEEEEeccCCCCCCCC
Q psy14258 303 PFAIHIYHRQKQPDALK 319 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~ 319 (440)
|++|+++|+.+||.+.+
T Consensus 646 P~~i~v~h~~~Qp~~~N 662 (791)
T 3m0c_C 646 PEDMVLFHNLTQPRGVN 662 (791)
T ss_dssp CCCEEEESGGGSCCCCC
T ss_pred ceeEeeeccccCCCCCC
Confidence 99999999999997654
No 5
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-49 Score=384.57 Aligned_cols=287 Identities=27% Similarity=0.457 Sum_probs=248.1
Q ss_pred cccCCCCCCCCCCcccCCCceEEc-cCCeeeec----------ceeEEEEeecccceeeeEEEecCCCceeeee-ecccc
Q psy14258 14 ADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQG----------VKTHLYETIEAFWEECFGPMDIEEWDEGLSF-LTFAQ 81 (440)
Q Consensus 14 ~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~~----------~~~ll~s~~~~~~~~~I~~~~l~~~~~~~~~-~~~~~ 81 (440)
+|||..++.|+|.|.|++++|+|. .+||.|.+ +++|+|++.+. |+++++++...+..+ .+..
T Consensus 1 i~ec~~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~ll~~~~~~-----I~~i~~~g~~~~~~~~~~~~- 74 (349)
T 3v64_C 1 VNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID-----IRQVLPHRSEYTLLLNNLEN- 74 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESSSCCEEEEECBSC-----EEEECTTSCCEEEEECSCSC-
T ss_pred CcccCCCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccccCceeEeecccc-----eEEEeCCCCeeEEeecCCCc-
Confidence 589998899999999999999999 99999875 68999999999 999999998777433 3555
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFC 156 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~ 156 (440)
+.|+++|+.+++|||+|...++|+++.+++...+.+ +..++..|.| |+||.+++|||+ ++|.++
T Consensus 75 -~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~----------~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~ 143 (349)
T 3v64_C 75 -AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV----------VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVA 143 (349)
T ss_dssp -EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE----------ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -eEEEEEeccccEEEEEeccCCceEEEecCCCCceEE----------EeCCCCCccEEEEecCCCeEEEEcCCCCeEEEE
Confidence 999999999999999999999999999987654332 4457789999 999999999999 789999
Q ss_pred ecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeC
Q psy14258 157 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
+++|+.+++++...+..|++||+||..|+|||+|++.. ++|+|+++||+.++.++...+.+|+||++|+.+++|||+|.
T Consensus 144 ~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~-~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 144 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp ETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred cCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCC-CEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 99999998888888999999999999999999999874 69999999999998888778999999999999999999999
Q ss_pred CCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE-ecCCCCeEEEEeccCCCC
Q psy14258 237 YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI-ANFSRPFAIHIYHRQKQP 315 (440)
Q Consensus 237 ~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~-~~~~~p~~~~v~~~~~qp 315 (440)
..++|++++++|+.++.+.... +.+|.||+++++.|||+||.+++|.++++.+|+...++ ..+..|++++++|+.+||
T Consensus 223 ~~~~I~~~~~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp 301 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQP 301 (349)
T ss_dssp TTTEEEEEETTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSC
T ss_pred CCCEEEEEeCCCCceEEEEeCC-CCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCc
Confidence 9999999999999988877643 88999999999999999999999999999999888755 467799999999999998
Q ss_pred CCCC
Q psy14258 316 DALK 319 (440)
Q Consensus 316 ~~~~ 319 (440)
...+
T Consensus 302 ~~~n 305 (349)
T 3v64_C 302 AGKN 305 (349)
T ss_dssp CCCC
T ss_pred cccC
Confidence 7654
No 6
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-49 Score=391.66 Aligned_cols=299 Identities=27% Similarity=0.462 Sum_probs=245.5
Q ss_pred ceec-CCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeeec----------ceeEEEEeecccceeeeEEEecCC
Q psy14258 2 TFRG-PNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQG----------VKTHLYETIEAFWEECFGPMDIEE 69 (440)
Q Consensus 2 ~~~~-~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~~----------~~~ll~s~~~~~~~~~I~~~~l~~ 69 (440)
||++ +|+++|+|++||..++.|+|.|.|++++|+|. .+||.+.+ +++|++++.+. |+++++++
T Consensus 31 G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~~~~~~l~~~~~~~-----I~~i~~~~ 105 (386)
T 3v65_B 31 GYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGPEPVLLFANRID-----IRQVLPHR 105 (386)
T ss_dssp ---------------------CCTTEEC-----CCEECCTTEEECTTSSCEEECSSCCEEEEECBSC-----EEEECTTS
T ss_pred CceECCCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCccccceeEeecCcc-----ceeeccCC
Confidence 6775 77899999999997789999999999999999 99999754 68999999999 99999998
Q ss_pred Cceeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcE
Q psy14258 70 WDEGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKI 147 (440)
Q Consensus 70 ~~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~l 147 (440)
...+..+ .+.. +.|+++|+.+++|||+|...++|+++.+++...+. ++..++..|.| |+||.+++|
T Consensus 106 ~~~~~~~~~~~~--~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~----------~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 106 SEYTLLLNNLEN--AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE----------VVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp CCCEEEECSCSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE----------EECSSCSCCCCEEEETTTTEE
T ss_pred CcEEEEecCCCc--cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE----------EEeCCCCCccEEEEEeCCCeE
Confidence 8776333 3555 99999999999999999999999999998765332 24467789999 999999999
Q ss_pred EEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEE
Q psy14258 148 VYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVT 223 (440)
Q Consensus 148 Y~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~ 223 (440)
||+ ++|.+++++|+.+++++...+..|++||+||..|+|||+|++.. ++|+|+++||+.++.++...+.+|+||+
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~-~~I~r~~~dG~~~~~~~~~~~~~PnGla 252 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNT-PRIEASSMDGSGRRIIADTHLFWPNGLT 252 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCC-CEEEEEeCCCCCcEEEEECCCCCeeeEE
Confidence 999 78999999999998888888999999999999999999999874 6999999999999999888899999999
Q ss_pred EeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE-ecCCC
Q psy14258 224 VDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI-ANFSR 302 (440)
Q Consensus 224 vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~-~~~~~ 302 (440)
+|+.+++|||+|...++|++++++|+.++.+.... +.+|.||+++++.|||+||.+++|.++++.+|+...++ ..+..
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~ 331 (386)
T 3v65_B 253 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG-LPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHF 331 (386)
T ss_dssp EEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS-CSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSC
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC-CCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCC
Confidence 99999999999999999999999999988877643 78999999999999999999999999999899888755 46679
Q ss_pred CeEEEEeccCCCCCCCC
Q psy14258 303 PFAIHIYHRQKQPDALK 319 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~ 319 (440)
|++|+++|+.+||.+.+
T Consensus 332 p~gi~v~~~~~q~~~~n 348 (386)
T 3v65_B 332 PMDIHTLHPQRQPAGKN 348 (386)
T ss_dssp CCCEEEESGGGSCCCCC
T ss_pred CceEEEEchhcCcCCcC
Confidence 99999999999987654
No 7
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=100.00 E-value=8.9e-47 Score=391.29 Aligned_cols=285 Identities=22% Similarity=0.406 Sum_probs=252.1
Q ss_pred ecccCCC-CCCCCCCcccCC--CceEEc-cCCeeeec---------ceeEEEEeecccceeeeEEEecCCCcee-eeee-
Q psy14258 13 DADECLI-DGSCDQTCTNTH--LSYTYT-DEGFSFQG---------VKTHLYETIEAFWEECFGPMDIEEWDEG-LSFL- 77 (440)
Q Consensus 13 d~~~C~~-~~~Cs~~C~n~~--~~~~C~-~~g~~l~~---------~~~ll~s~~~~~~~~~I~~~~l~~~~~~-~~~~- 77 (440)
..++|.. ++.|+|+|.+.+ .+|+|. +.||.|.+ +++|||+++.. |++++++....+ +.++
T Consensus 271 ~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~~-----i~~i~l~~~~~~~~~~~~ 345 (619)
T 3s94_A 271 ATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLLARRTD-----LRRISLDTPDFTDIVLQL 345 (619)
T ss_dssp CCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEEEESSC-----EEEEESSSTTCCCEECCC
T ss_pred ccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEEEcccc-----eEEEecCCCccceeEEec
Confidence 3588874 689999998876 479999 99998865 68999999999 999999877654 3332
Q ss_pred --cccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----
Q psy14258 78 --TFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---- 150 (440)
Q Consensus 78 --~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---- 150 (440)
+.+ +.|||||+.+++|||+|...++|+++.++|+..+. ++..++..|.| |+||.+++|||+
T Consensus 346 ~~l~~--~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~----------v~~~~~~~p~GlAvD~~~~~lY~tD~~~ 413 (619)
T 3s94_A 346 EDIRH--AIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQF----------VVTAQIAHPDGIAVDWVARNLYWTDTGT 413 (619)
T ss_dssp SCCSS--EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE----------EECSSCSCCCEEEEETTTTEEEEEETTT
T ss_pred cccCc--cEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEE----------EEECCCCCcCceEEecccCcEEEEeCCC
Confidence 455 99999999999999999999999999998865433 24567889999 999999999999
Q ss_pred ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCE
Q psy14258 151 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKH 230 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ 230 (440)
++|++++++|+.+++++...+..|++||+||.+|+|||||++.. ++|+|++|||+.++.++...+.+|+||++|+.+++
T Consensus 414 ~~I~v~~~~G~~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~-~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~ 492 (619)
T 3s94_A 414 DRIEVTRLNGTMRKILISEDLEEPRAIVLDPMVGYMYWTDWGEI-PKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGK 492 (619)
T ss_dssp TEEEEEETTSCSCEEEECTTCCSEEEEEEETTTTEEEEEECSSS-CEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTE
T ss_pred CcEEEEeCCCCeEEEEEECCCCCeeeEEEEcCCCcEEEecCCCC-CEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCE
Confidence 79999999999999998888999999999999999999999875 89999999999999998888999999999999999
Q ss_pred EEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEec
Q psy14258 231 VYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYH 310 (440)
Q Consensus 231 ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~ 310 (440)
|||+|...++|++++++|+.++++..+. +.+|+||++++++||||||.+++|+++++.+|....+..++..|++++++|
T Consensus 493 LY~aD~~~~~I~~~~~dG~~~~~~~~~~-l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g~~~~~~~~~~~~~~i~~~~ 571 (619)
T 3s94_A 493 IYWGDAKTDKIEVMNTDGTGRRVLVEDK-IPHIFGFTLLGDYVYWTDWQRRSIERVHKRSAEREVIIDQLPDLMGLKATN 571 (619)
T ss_dssp EEEEETTTTEEEEEESSSCCCEEEEECC-CCSSCCEEEETTEEEEECTTSSCEEEEESSSCCEEEEECSCCCEEEEEEEE
T ss_pred EEEEECCCCEEEEEecCCCceEEEeccC-CCCcEEEEEECCEEEEeecCCCeEEEEEcCCCceEEEecCCCCCceeeecc
Confidence 9999999999999999999999887643 889999999999999999999999999999994434555777899999999
Q ss_pred cCCCCC
Q psy14258 311 RQKQPD 316 (440)
Q Consensus 311 ~~~qp~ 316 (440)
+..|+.
T Consensus 572 ~~~~~~ 577 (619)
T 3s94_A 572 VHRVIG 577 (619)
T ss_dssp SSCCCC
T ss_pred cccccc
Confidence 887763
No 8
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=100.00 E-value=6.7e-47 Score=392.52 Aligned_cols=290 Identities=19% Similarity=0.304 Sum_probs=249.6
Q ss_pred ecccCCC-CCCCCCCcccCC-CceEEc-cCCeeeec--------ceeEEEEeecccceeeeEEEecCCCcee---eeee-
Q psy14258 13 DADECLI-DGSCDQTCTNTH-LSYTYT-DEGFSFQG--------VKTHLYETIEAFWEECFGPMDIEEWDEG---LSFL- 77 (440)
Q Consensus 13 d~~~C~~-~~~Cs~~C~n~~-~~~~C~-~~g~~l~~--------~~~ll~s~~~~~~~~~I~~~~l~~~~~~---~~~~- 77 (440)
..|+|.. ++.|+|+|.+.+ ++|+|. +.||.|.+ .++|+|+++.. |+++.++..... +++.
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~Ll~s~~~~-----i~~i~l~~~~~~~~~l~~~~ 338 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPTTFLLFSQKSA-----INRMVIDEQQSPDIILPIHS 338 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCSSEEEEEETTE-----EEEECCCTTCCCCEECCCTT
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCccccceeeeeccce-----EEEEecccccCceEEEEehh
Confidence 5799985 689999999998 999999 99999865 68999999999 999999865432 3333
Q ss_pred cccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ce
Q psy14258 78 TFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EA 152 (440)
Q Consensus 78 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~ 152 (440)
+.+ +.|||||+.+++|||+|...++|+++.++|+....+... ......++..|.| |+||++++|||+ ++
T Consensus 339 ~~~--~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~----~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~ 412 (628)
T 4a0p_A 339 LRN--VRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVS----SVPSQNLEIQPYDLSIDIYSRYIYWTCEATNV 412 (628)
T ss_dssp CSC--EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC------------CCCEEEEEEETTTTEEEEEETTTTE
T ss_pred cCC--ceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEc----ccccccccCCcceEEeeccCCeEEEEcCCCCE
Confidence 455 999999999999999999999999999988764332000 0000125778999 999999999999 78
Q ss_pred EEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEE
Q psy14258 153 IYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVY 232 (440)
Q Consensus 153 I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly 232 (440)
|++++++|+.+++++...+..|++||+||.+|+|||||++...++|+|++|||+.++.++...+.+|+||++|+.+++||
T Consensus 413 I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~~~LY 492 (628)
T 4a0p_A 413 INVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRLGKLF 492 (628)
T ss_dssp EEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred EEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCCCEEE
Confidence 99999999999999888899999999999999999999987522899999999999999988899999999999999999
Q ss_pred EEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe-cCCCCeEEEEecc
Q psy14258 233 WVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA-NFSRPFAIHIYHR 311 (440)
Q Consensus 233 ~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~-~~~~p~~~~v~~~ 311 (440)
|+|...++|++++++|++++++... .+.+|+||++++++|||+||.+++|++++|.+|+....+. .+..|.++.++|.
T Consensus 493 w~D~~~~~I~~~~~dG~~r~~~~~~-~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~ 571 (628)
T 4a0p_A 493 WADSDLRRIESSDLSGANRIVLEDS-NILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKE 571 (628)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECS-SCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEEECC
T ss_pred EEeCCCCEEEEEeCCCCceEEEEcC-CCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccCCCCcceEEEee
Confidence 9999999999999999999998864 3889999999999999999999999999999998887554 5778999999987
Q ss_pred CCC
Q psy14258 312 QKQ 314 (440)
Q Consensus 312 ~~q 314 (440)
..|
T Consensus 572 ~~~ 574 (628)
T 4a0p_A 572 LNL 574 (628)
T ss_dssp CCH
T ss_pred ccc
Confidence 654
No 9
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=2.2e-45 Score=386.47 Aligned_cols=304 Identities=23% Similarity=0.437 Sum_probs=261.9
Q ss_pred ceecCCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeeec----------ceeEEEEeecccceeeeEEEecCCC
Q psy14258 2 TFRGPNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQG----------VKTHLYETIEAFWEECFGPMDIEEW 70 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~~----------~~~ll~s~~~~~~~~~I~~~~l~~~ 70 (440)
||++.++++|+|++||..++.|+|.|.|++++|+|. .+||.+.+ .++||+++.+. |+++++++.
T Consensus 322 G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~~~~~ll~~~~~~-----I~~id~~~~ 396 (699)
T 1n7d_A 322 GFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHE-----VRKMTLDRS 396 (699)
T ss_dssp SSCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCSSCCCBCCCCTTC------CEECTTSC
T ss_pred CeEcCCCCcccCccccCCCCccccccccCCCCeeeeeecccccCCCCCcccccccceeEEecCccc-----eEEEeCCCC
Confidence 677677899999999998889999999999999999 99999854 68899999999 999999988
Q ss_pred ceeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEE
Q psy14258 71 DEGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIV 148 (440)
Q Consensus 71 ~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY 148 (440)
.+...+ .+.. +.||+||+.+++|||+|...++|+++.+++.... ......+..++..|.+ ||||.+++||
T Consensus 397 ~~~~~~~~~~~--p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~~~~~~i~~~~~~P~glavD~~~g~LY 468 (699)
T 1n7d_A 397 EYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDTVISRDIQAPDGLAVDWIHSNIY 468 (699)
T ss_dssp CEECCSCCCTT--CCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------CCCCCBCCSCC--CCCEECCCSSSBCE
T ss_pred cceeeeccCcc--eEEEccccccCeEEEEecCCCeEEEEecCCCCCC------cceEEEEeCCCCCcceEEEEeeCCcEE
Confidence 776333 3555 9999999999999999999999999998862110 0111223456788999 9999999999
Q ss_pred Ee----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEE
Q psy14258 149 YP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTV 224 (440)
Q Consensus 149 ~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~v 224 (440)
|+ ++|.+++++|..+++++...+..|++||+||..|+|||+|++.. ++|+++++||+.+++++...+.+|+||++
T Consensus 469 ~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~-~~I~~~~~dG~~~~~l~~~~l~~PnGlav 547 (699)
T 1n7d_A 469 WTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTP-AKIKKGGLNGVDIYSLVTENIQWPNGITL 547 (699)
T ss_dssp ECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSS-CCEEBCCSSSCCCCEESCSSCSSCCCEEE
T ss_pred EEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCC-CeEEEEeCCCCCeeEEEeCCCCCccEEEE
Confidence 99 78999999999988888878899999999999999999998764 69999999999998888778999999999
Q ss_pred eCCCCEEEEEeCCCCcEEEEEccCCCcEEEec-CCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe-cCCC
Q psy14258 225 DFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK-GFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA-NFSR 302 (440)
Q Consensus 225 D~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~-~~~~ 302 (440)
|+.+++|||+|...++|++++++|++++++.. ...+.+|.||+++++.|||+||.+++|.++++.+|+...++. ++.+
T Consensus 548 d~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~ 627 (699)
T 1n7d_A 548 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLS 627 (699)
T ss_dssp CTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSS
T ss_pred eccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCC
Confidence 99999999999999999999999999988876 234789999999999999999999999999999888877554 5668
Q ss_pred CeEEEEeccCCCCCCCC
Q psy14258 303 PFAIHIYHRQKQPDALK 319 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~ 319 (440)
|++|+++|+.+||...+
T Consensus 628 P~~i~v~~~~~qp~~~n 644 (699)
T 1n7d_A 628 PEDMVLFHQLTQPRGVN 644 (699)
T ss_dssp CCCCCBCSSSSSCCSCC
T ss_pred CcEEEEeCcccCCCCCC
Confidence 99999999999997543
No 10
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=100.00 E-value=7.6e-42 Score=326.89 Aligned_cols=255 Identities=26% Similarity=0.489 Sum_probs=226.0
Q ss_pred ceeEEEEeecccceeeeEEEecCCCc--eeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeecc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWD--EGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKW 122 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~--~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~ 122 (440)
+|+|||++++. |+++++++.. .++.+ .+.+ ++|+|+|+.+++|||+|...++|+++.+++.....
T Consensus 4 ~p~ll~~~~~~-----I~~i~l~~~~~~~~~~~~~~~~--~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~----- 71 (318)
T 3sov_A 4 APLLLYANRRD-----LRLVDATNGKENATIVVGGLED--AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ----- 71 (318)
T ss_dssp CCEEEEECEEE-----EEEEETTCTTSCCEEEEEEEEE--EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC-----
T ss_pred ccEEEEEccCe-----EEEEECCCCceEEEEEecCCCc--cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE-----
Confidence 78999999999 9999999875 33333 3555 99999999999999999999999999988764211
Q ss_pred ccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCc
Q psy14258 123 GATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPM 197 (440)
Q Consensus 123 ~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~ 197 (440)
.++..++..|.| |+||.+++|||+ ++|++++++|+.+++++...+..|++||+||..|+|||+|++.. ++
T Consensus 72 ----~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~-~~ 146 (318)
T 3sov_A 72 ----NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEV-PK 146 (318)
T ss_dssp ----EEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSS-CE
T ss_pred ----EEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCC-CE
Confidence 224567889999 999999999999 79999999999998888788999999999999999999998754 79
Q ss_pred EEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEe
Q psy14258 198 LERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 198 I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td 277 (440)
|+|+++||+.++.++...+.+|+||++|+.+++|||+|...++|++++++|++++++..+. +.+|+||+++++.+||+|
T Consensus 147 I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~~~lywtd 225 (318)
T 3sov_A 147 IERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTD 225 (318)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSC-CSCEEEEEEETTEEEEEE
T ss_pred EEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCC-CCCceEEEEeCCEEEEEe
Confidence 9999999999998888889999999999999999999999999999999999999888743 889999999999999999
Q ss_pred cCCCeEEEEeccCCCceEEE-ecCCCCeEEEEeccCCCCCCC
Q psy14258 278 WRNQSIIRVNKFNSDDYETI-ANFSRPFAIHIYHRQKQPDAL 318 (440)
Q Consensus 278 ~~~~~i~~~~~~~g~~~~~~-~~~~~p~~~~v~~~~~qp~~~ 318 (440)
|.+++|.++++.+|+....+ .+...|++++++|+.+||...
T Consensus 226 ~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~~~~ 267 (318)
T 3sov_A 226 WSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNAT 267 (318)
T ss_dssp TTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGGSCCCC
T ss_pred cCCCeEEEEECCCCCceEEEeCCCCCCcEEEEeccccccccc
Confidence 99999999999988887654 466799999999999998654
No 11
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=100.00 E-value=3.1e-40 Score=316.13 Aligned_cols=259 Identities=22% Similarity=0.403 Sum_probs=222.0
Q ss_pred ceeEEEEeecccceeeeEEEecCCCceeeee-ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeecccc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWDEGLSF-LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA 124 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~~~~~~-~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~ 124 (440)
+|+|||++++. |+++++++......+ .+.. +.|+++|+.+++|||+|...++|+++.+++.... ..
T Consensus 1 ~~~ll~~~~~~-----I~~i~~~~~~~~~~~~~~~~--p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~------~~ 67 (316)
T 1ijq_A 1 IAYLFFTNRHE-----VRKMTLDRSEYTSLIPNLRN--VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SS 67 (316)
T ss_dssp CCEEEEECBSS-----EEEEETTSCCCEEEECSCSS--EEEEEEETTTTEEEEEETTTTEEEEEEC--------------
T ss_pred CCEEEEECCCe-----EEEEECCCcceEehhcCCCc--eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC------cc
Confidence 58999999999 999999988766333 3555 9999999999999999999999999998862100 00
Q ss_pred ccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEE
Q psy14258 125 TRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLE 199 (440)
Q Consensus 125 ~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~ 199 (440)
....+..++..|.+ |+||.+++|||+ ++|.+++++|+.+++++...+..|++|++||..|+|||+|++.. ++|+
T Consensus 68 ~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~-~~I~ 146 (316)
T 1ijq_A 68 YDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTP-AKIK 146 (316)
T ss_dssp CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSS-CEEE
T ss_pred cEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCC-CeEE
Confidence 11123456789999 999999999999 78999999999988888778899999999999999999999753 6999
Q ss_pred EEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-CccCceeeeeEecCEEEEEec
Q psy14258 200 RSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG-FPVQNLYDITVFENNLFVTSW 278 (440)
Q Consensus 200 r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~-~~~~~p~gl~~~~~~ly~td~ 278 (440)
++++||+.++.++...+.+|+||++|+.+++|||+|...++|++++++|++++++... ..+.+|.||+++++.|||+||
T Consensus 147 ~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~ 226 (316)
T 1ijq_A 147 KGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 226 (316)
T ss_dssp EEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred EEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEEC
Confidence 9999999998888778899999999999999999999999999999999999888762 347899999999999999999
Q ss_pred CCCeEEEEeccCCCceEEE-ecCCCCeEEEEeccCCCCCCC
Q psy14258 279 RNQSIIRVNKFNSDDYETI-ANFSRPFAIHIYHRQKQPDAL 318 (440)
Q Consensus 279 ~~~~i~~~~~~~g~~~~~~-~~~~~p~~~~v~~~~~qp~~~ 318 (440)
.+++|.++++.+|+..+++ .++..|.+|+++|+.+||...
T Consensus 227 ~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp~~~ 267 (316)
T 1ijq_A 227 INEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGV 267 (316)
T ss_dssp TTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCC
T ss_pred CCCeEEEEeCCCCcceEEEecCCCCceEEEEeccccCCccc
Confidence 9999999999999887755 456789999999999998543
No 12
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-33 Score=277.21 Aligned_cols=325 Identities=15% Similarity=0.210 Sum_probs=211.6
Q ss_pred eecccCCC-CCCCCCCcccCCCceEEc-cCCeeeecceeEEEEeeccc------ceeeeEEEecCCC-cee----eeeec
Q psy14258 12 VDADECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQGVKTHLYETIEAF------WEECFGPMDIEEW-DEG----LSFLT 78 (440)
Q Consensus 12 ~d~~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~~~~ll~s~~~~~------~~~~I~~~~l~~~-~~~----~~~~~ 78 (440)
.|+|||.. ++.|+|.|.+..++|.|. ++||.|.++.... .+.++| -..+ ++..|. .-. ..+..
T Consensus 1 ~~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~~C---~~~~g~~~C~C~~g~~l~~ 76 (386)
T 3v65_B 1 TGEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQGC---TNSEGAFQCWCEAGYELRP 76 (386)
T ss_dssp ----------------------------------------------------CCTTEE---C-----CCEECCTTEEECT
T ss_pred CCcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccCcC---CCCCCCCeEEECCCceEcC
Confidence 36899974 678999999999999999 9999975422222 111111 0001 111111 000 11111
Q ss_pred ccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceE
Q psy14258 79 FAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAI 153 (440)
Q Consensus 79 ~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I 153 (440)
....-.+ .+. ...|++++. +.|+++.+++..... +...+..|.+ |+|+..+.|||+ ++|
T Consensus 77 d~~~C~~--~~~-~~~l~~~~~--~~I~~i~~~~~~~~~-----------~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I 140 (386)
T 3v65_B 77 DRRSCKA--LGP-EPVLLFANR--IDIRQVLPHRSEYTL-----------LLNNLENAIALDFHHRRELVFWSDVTLDRI 140 (386)
T ss_dssp TSSCEEE--CSS-CCEEEEECB--SCEEEECTTSCCCEE-----------EECSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CCCeECC--ccc-cceeEeecC--ccceeeccCCCcEEE-----------EecCCCccEEEEEecCCCeEEEEeCCCCcE
Confidence 1111222 233 567888876 578888887654322 3467889999 999999999999 799
Q ss_pred EEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEE
Q psy14258 154 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYW 233 (440)
Q Consensus 154 ~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~ 233 (440)
.+.+++|+..+.++...+..|.|||+|+..|.|||+|... .+|++++++|+.++.++...+..|+||++|+.+++|||
T Consensus 141 ~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~--~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 141 LRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGT--SRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp EEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTT--TEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred EEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCC--CeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 9999999988888888889999999999999999999987 59999999999999888888899999999999999999
Q ss_pred EeCCC-CcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEec
Q psy14258 234 VDTYL-DFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYH 310 (440)
Q Consensus 234 ~d~~~-~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~ 310 (440)
+|... ++|++++++|+.++.+... .+..|.||+++ +++|||+|+.++.|.+++.. |.....
T Consensus 219 td~~~~~~I~r~~~dG~~~~~~~~~-~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~-------------- 282 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSGRRIIADT-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD-GSHRKA-------------- 282 (386)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECS-SCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT-SCSCEE--------------
T ss_pred eccCCCCEEEEEeCCCCCcEEEEEC-CCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC-CCeeEE--------------
Confidence 99988 8999999999999888763 27899999997 66999999998888888763 211110
Q ss_pred cCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEe-cCCCC
Q psy14258 311 RQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRK-MFGRG 389 (440)
Q Consensus 311 ~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~-~~g~~ 389 (440)
+...++..|.||+++ ++.|||+|...++|.|++ .+|..
T Consensus 283 ---------------------------------------~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 283 ---------------------------------------VISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp ---------------------------------------EECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCS
T ss_pred ---------------------------------------EEECCCCCceEEEEE--CCEEEEeeCCCCeEEEEECCCCcc
Confidence 001124579999995 578999999999999999 68877
Q ss_pred eEEEEECCCCCeeeEEEecCCCcEEEE
Q psy14258 390 KEVVIDTGIYNVEGMAVDWMANNLYWT 416 (440)
Q Consensus 390 ~~~~~~~~~~~~~glAvD~~~~~lYwt 416 (440)
.+++. .++..|.||+++...+..+.+
T Consensus 322 ~~~i~-~~~~~p~gi~v~~~~~q~~~~ 347 (386)
T 3v65_B 322 QEIIR-NKLHFPMDIHTLHPQRQPAGK 347 (386)
T ss_dssp CEEEE-CSCSCCCCEEEESGGGSCCCC
T ss_pred eEEEc-cCCCCCceEEEEchhcCcCCc
Confidence 76665 578899999998655544443
No 13
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=100.00 E-value=8e-32 Score=265.81 Aligned_cols=324 Identities=15% Similarity=0.212 Sum_probs=232.9
Q ss_pred ccCCC-CCCCCCCcccCCCceEEc-cCCeeeecceeEEEEeecccceeee---EEEecCCC-cee----eeeecccceEE
Q psy14258 15 DECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQGVKTHLYETIEAFWEECF---GPMDIEEW-DEG----LSFLTFAQEAI 84 (440)
Q Consensus 15 ~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~~~~ll~s~~~~~~~~~I---~~~~l~~~-~~~----~~~~~~~~~~~ 84 (440)
|||.. +..|++.|.|++++|.|. ++||.+.+. ...- +.++|..... .=++..|. .-. .........-.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~-~~C~-dideC~~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~ 78 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCE-DIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACK 78 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSS-SCEE-ECCCCSTTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCC-Cccc-CchhhhccCCCCCccCCCccceeeecccccccccccccee
Confidence 58874 568999999999999999 999987321 1110 1111110000 00011111 000 11110000011
Q ss_pred EEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecC
Q psy14258 85 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHY 159 (440)
Q Consensus 85 ~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~d 159 (440)
+ .+ ....|++++. +.|+++.+++..... +...+..|.+ |+|+..+.|||+ ++|.+.+++
T Consensus 79 ~--~~-~~~~ll~~~~--~~I~~i~l~~~~~~~-----------~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~ 142 (400)
T 3p5b_L 79 A--VG-SIAYLFFTNR--HEVRKMTLDRSEYTS-----------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLD 142 (400)
T ss_dssp C--ST-TSCEEEEEET--TEEEEECTTSCSCEE-----------EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-
T ss_pred e--cc-ccceeEEecc--ceeEEEccCCcceeE-----------eccccCcceEEeeeeccCceEEEecCCCeEEEEEcc
Confidence 1 11 2356888876 678888887654322 3467889999 999999999999 789999999
Q ss_pred C----ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEe
Q psy14258 160 M----EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVD 235 (440)
Q Consensus 160 g----~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d 235 (440)
| ...+.++...+..|.|||+|+..+.|||+|... .+|++++++|..++.++...+..|.||++|+.+++|||+|
T Consensus 143 g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~--~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td 220 (400)
T 3p5b_L 143 RAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTD 220 (400)
T ss_dssp -----CCCEEEECSSCSCEEEEEEETTTTEEEEEETTT--TEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEE
T ss_pred cCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCC--CeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEe
Confidence 8 446677777889999999999999999999887 5999999999999999888889999999999999999999
Q ss_pred CCC-CcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccC
Q psy14258 236 TYL-DFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQ 312 (440)
Q Consensus 236 ~~~-~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~ 312 (440)
.+. .+|++++++|+.++.+... .+..|.||+++ ++.|||+|...+.|.+++.. |....++.
T Consensus 221 ~~~~~~I~~~~~dG~~~~~~~~~-~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~-------------- 284 (400)
T 3p5b_L 221 WGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTIL-------------- 284 (400)
T ss_dssp CSSSCCEEEEETTSCSCEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCCCEEEE--------------
T ss_pred CCCCCEEEEEeCCCCccEEEEEC-CCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC-CCccEEEE--------------
Confidence 874 7999999999999888764 27899999998 56999999999999888864 22211100
Q ss_pred CCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEe-cCCCCeE
Q psy14258 313 KQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRK-MFGRGKE 391 (440)
Q Consensus 313 ~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~-~~g~~~~ 391 (440)
. .. ..+..|.||+++ ++.|||+|...++|++++ .+|...+
T Consensus 285 -------------------------~--~~----------~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 285 -------------------------E--DE----------KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp -------------------------E--CS----------STTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred -------------------------e--CC----------CCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceE
Confidence 0 00 124578999985 679999999999999998 6787776
Q ss_pred EEEECCCCCeeeEEEecCCCcEE
Q psy14258 392 VVIDTGIYNVEGMAVDWMANNLY 414 (440)
Q Consensus 392 ~~~~~~~~~~~glAvD~~~~~lY 414 (440)
++. .++..|.+|++--..+..+
T Consensus 326 ~i~-~~~~~p~~i~v~~~~~qp~ 347 (400)
T 3p5b_L 326 LLA-ENLLSPEDMVLFHNLTQPR 347 (400)
T ss_dssp EEE-CSCSCEEEEEEESGGGSCC
T ss_pred EEe-cCCCCCceEEEEeeccCCC
Confidence 664 5788899999864333333
No 14
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=100.00 E-value=3.7e-31 Score=246.76 Aligned_cols=247 Identities=20% Similarity=0.338 Sum_probs=208.0
Q ss_pred ceeEEEEeecccceeeeEEEecCCCcee-------eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcce
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWDEG-------LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMF 118 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~~~-------~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~ 118 (440)
.|+|+|++.+. |+++++++.... +..+... +.++++|+.+++|||+|...++|+++++++.....
T Consensus 1 ~~~l~~~~~~~-----I~~~~~~g~~~~~~~~~~~~~~~~~~--~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~- 72 (267)
T 1npe_A 1 GTHLLFAQTGK-----IERLPLERNTMKKTEAKAFLHIPAKV--IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT- 72 (267)
T ss_dssp CEEEEEEEEEE-----EEEEEESSSCBCGGGCEEEEEEEEEE--EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-
T ss_pred CcEEEEEcCCe-----EEEEEecCcccccccceeeecCCCCc--EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-
Confidence 37899999989 999999987643 2223333 89999999999999999999999999988754322
Q ss_pred eeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC
Q psy14258 119 FTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA 193 (440)
Q Consensus 119 ~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~ 193 (440)
.+..++..|.+ |+|+.+++|||+ ++|.+++++|+..++++...+..|.+|++||..|+|||+++..
T Consensus 73 ---------~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 73 ---------IIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp ---------EECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred ---------EEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC
Confidence 13345679999 999999999999 7899999999888777776778999999999889999999873
Q ss_pred CCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEE
Q psy14258 194 TRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNL 273 (440)
Q Consensus 194 ~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~l 273 (440)
..++|+++++||..++.+....+..|+||++|+.+++|||+|...++|.+++++|..+..+..+ +.+|.||+++++.|
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~--~~~P~gi~~d~~~l 221 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG--LQYPFAVTSYGKNL 221 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC--CCSEEEEEEETTEE
T ss_pred CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC--CCCceEEEEeCCEE
Confidence 2269999999999888777667889999999988999999999999999999999877666654 67999999999999
Q ss_pred EEEecCCCeEEEEeccCCCceEEEec--CCCCeEEEEecc
Q psy14258 274 FVTSWRNQSIIRVNKFNSDDYETIAN--FSRPFAIHIYHR 311 (440)
Q Consensus 274 y~td~~~~~i~~~~~~~g~~~~~~~~--~~~p~~~~v~~~ 311 (440)
||+++.+++|.++++.+|+....+.. ...|.++.+..+
T Consensus 222 yva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~ 261 (267)
T 1npe_A 222 YYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALS 261 (267)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECS
T ss_pred EEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCc
Confidence 99999999999999988887776643 336899987743
No 15
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=2.7e-31 Score=280.66 Aligned_cols=324 Identities=15% Similarity=0.207 Sum_probs=231.7
Q ss_pred cccCCC-CCCCCCCcccCCCceEEc-cCCeeeecceeEEEEeecccceeee---EEEecCCCcee------eeeecccce
Q psy14258 14 ADECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQGVKTHLYETIEAFWEECF---GPMDIEEWDEG------LSFLTFAQE 82 (440)
Q Consensus 14 ~~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~~~~ll~s~~~~~~~~~I---~~~~l~~~~~~------~~~~~~~~~ 82 (440)
++||.. ++.|+|.|.+++++|.|. ++||.+.+. .... +.+++-.... .=++..|. +. ..+....
T Consensus 312 ~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g-~~C~-dideC~~~~~C~~~C~n~~gs-y~C~C~~Gy~l~~~~-- 386 (791)
T 3m0c_C 312 TNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCE-DIDECQDPDTCSQLCVNLEGG-YKCQCEEGFQLDPHT-- 386 (791)
T ss_dssp CCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETT-TEEE-CCCCCSSSSSCTTTCCBCSSC-BCCCCCSSEECCSSC--
T ss_pred cccccccccCccccccCCCCCcccCCCCCCccCCC-Cccc-cCcccCCCCCCCCeeecCCCC-ceeecCCCCEeCCCC--
Confidence 577874 568999999999999999 999987321 1111 1111000000 00111111 11 1111011
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEe
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCT 157 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~ 157 (440)
-.-.+++. ...|++++. +.|+++.+++..... +...+..|.+ |+|+..++|||+ ++|++.+
T Consensus 387 ~~C~~~~~-~p~Ll~an~--~~Ir~i~l~~~~~~~-----------l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~ 452 (791)
T 3m0c_C 387 KACKAVGS-IAYLFFTNR--HEVRKMTLDRSEYTS-----------LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQ 452 (791)
T ss_dssp CCCEETTS-CCEEEEECB--SSEEEECTTSCCCEE-----------EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ceeeeccc-ccccccccc--cceeEeeccCCccee-----------eecCCCceEEEeecccCCeeEEeeccceeEEEEe
Confidence 11122332 346777766 568787777554322 3467889999 999999999999 7899999
Q ss_pred cCCc----eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEE
Q psy14258 158 HYME----HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYW 233 (440)
Q Consensus 158 ~dg~----~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~ 233 (440)
++|. ..++++...+..|.|||||+..+.|||+|... .+|++++++|..+++++...+..|.||+||+..++|||
T Consensus 453 l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~--~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYw 530 (791)
T 3m0c_C 453 LDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYW 530 (791)
T ss_dssp C--------CEEEECSSCSCCCEEEEETTTTEEEEEETTT--TEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEE
T ss_pred ccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCC--CeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEE
Confidence 9984 44667777899999999999999999999887 59999999999999999888999999999999999999
Q ss_pred EeCCC-CcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEec
Q psy14258 234 VDTYL-DFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYH 310 (440)
Q Consensus 234 ~d~~~-~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~ 310 (440)
+|.+. .+|++++++|+.++++.... +..|.||+++ +++|||+|+..+.|.+++.. |..+.++.
T Consensus 531 tD~g~~~~I~~~~~dG~~~~~lv~~~-l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v~------------ 596 (791)
T 3m0c_C 531 TDWGTPAKIKKGGLNGVDIYSLVTEN-IQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTIL------------ 596 (791)
T ss_dssp EECSSSCEEEEEETTSCCEEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEE------------
T ss_pred ecCCCCCeEEEEecCCCceEEEEeCC-CCCceEEEEecCCCeEEEEeCCCCcEEEEecC-CCceEEEe------------
Confidence 99876 89999999999998887743 8899999998 66999999998899888864 32221110
Q ss_pred cCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEe-cCCCC
Q psy14258 311 RQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRK-MFGRG 389 (440)
Q Consensus 311 ~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~-~~g~~ 389 (440)
. .. ..+..|.+|+++ +++|||+|...++|++++ .+|..
T Consensus 597 ---------------------------~--~~----------~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 597 ---------------------------E--DE----------KRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp ---------------------------E--CT----------TTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCC
T ss_pred ---------------------------c--CC----------CccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcc
Confidence 0 00 124578888885 579999999999999998 56767
Q ss_pred eEEEEECCCCCeeeEEEecCCCcEE
Q psy14258 390 KEVVIDTGIYNVEGMAVDWMANNLY 414 (440)
Q Consensus 390 ~~~~~~~~~~~~~glAvD~~~~~lY 414 (440)
++++. .++..|.+|+|.-..+..+
T Consensus 636 ~~~l~-~~l~~P~~i~v~h~~~Qp~ 659 (791)
T 3m0c_C 636 VNLLA-ENLLSPEDMVLFHNLTQPR 659 (791)
T ss_dssp CEEEE-CSCSCCCCEEEESGGGSCC
T ss_pred eEEee-cCCCCceeEeeeccccCCC
Confidence 76664 5788999999874333333
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-30 Score=252.90 Aligned_cols=238 Identities=21% Similarity=0.326 Sum_probs=200.0
Q ss_pred eeeecCCcEEEe--ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCc
Q psy14258 139 RFPMVTHKIVYP--EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKI 216 (440)
Q Consensus 139 avD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~ 216 (440)
+.+. ...|+++ ..|.+.+++|...+.++. .+..|.+|++|+..+.|||+|... .+|.|++++|+..+.++...+
T Consensus 40 ~~~~-~~~ll~~~~~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~--~~I~r~~~~g~~~~~~~~~~~ 115 (349)
T 3v64_C 40 ALGP-EPVLLFANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTL--DRILRANLNGSNVEEVVSTGL 115 (349)
T ss_dssp ESSS-CCEEEEECBSCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSC
T ss_pred cccc-CceeEeecccceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccC--CceEEEecCCCCceEEEeCCC
Confidence 4444 4568888 789999999987766654 778899999999999999999886 599999999999888887788
Q ss_pred cCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCC-CeEEEEeccCCCc
Q psy14258 217 VYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRN-QSIIRVNKFNSDD 293 (440)
Q Consensus 217 ~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~-~~i~~~~~~~g~~ 293 (440)
..|.||++|+.+++|||+|...++|++++++|..++.+.... +..|.+|+++ ++.|||+|+.. ++|++++..
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~-l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d---- 190 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS-LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD---- 190 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT-CSCEEEEEEETTTTEEEEEECSSSCEEEEEETT----
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC-CCCcceEEEecCcCeEEEeccCCCCEEEEEeCC----
Confidence 899999999999999999999999999999999988877642 7899999999 56999999876 666665542
Q ss_pred eEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEE
Q psy14258 294 YETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 294 ~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~ 373 (440)
+. .. ..+...++..|.||++|+.+++|||+
T Consensus 191 -----------------------------------------------G~-~~--~~~~~~~~~~PnGla~d~~~~~lY~a 220 (349)
T 3v64_C 191 -----------------------------------------------GS-GR--RIIADTHLFWPNGLTIDYAGRRMYWV 220 (349)
T ss_dssp -----------------------------------------------SC-SC--EESCCSSCSCEEEEEEETTTTEEEEE
T ss_pred -----------------------------------------------CC-Cc--EEEEECCCCCcceEEEeCCCCEEEEE
Confidence 22 00 00111245679999999999999999
Q ss_pred ECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEE-eCCCeeeEEee
Q psy14258 374 ELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAK-ISDFSIRKVLY 438 (440)
Q Consensus 374 d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~-~~g~~~~~~l~ 438 (440)
|...++|++++++|+.+++++..++..|.|||++ +++|||||.++++|.+++ .+| +.+++|.
T Consensus 221 D~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~~~~~V~~~~~~~G-~~~~~i~ 283 (349)
T 3v64_C 221 DAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDWHTKSINSANKFTG-KNQEIIR 283 (349)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-CSCEEEE
T ss_pred ECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecCCCCeEEEEEccCC-CccEEec
Confidence 9999999999999999888888788999999997 789999999999999998 788 5566554
No 17
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.98 E-value=1e-29 Score=242.76 Aligned_cols=232 Identities=17% Similarity=0.307 Sum_probs=190.5
Q ss_pred cEEEe--ceEEEEecCCce--EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc-eeEEecCccCce
Q psy14258 146 KIVYP--EAIYFCTHYMEH--CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER-FPMVTHKIVYPY 220 (440)
Q Consensus 146 ~lY~~--~~I~~~~~dg~~--~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~-~~l~~~~~~~P~ 220 (440)
.|+++ ..|.+.++++.. ...++ .++..|.+|+.|+..+.|||+|... .+|.|++++|+.. +.++...+..|.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~-~~~~~~~~ld~d~~~~~lyw~D~~~--~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVV-GGLEDAAAVDFVFSHGLIYWSDVSE--EAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEE-EEEEEEEEEEEEGGGTEEEEEETTT--TEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEccCeEEEEECCCCceEEEEEe-cCCCccEEEEEEeCCCEEEEEECCC--CcEEEEEccCCCceEEEEcCCCCCcc
Confidence 37777 789999999974 33333 3677899999999999999999886 5999999999864 456666788999
Q ss_pred EEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecC-CCeEEEEeccCCCceEEE
Q psy14258 221 GVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWR-NQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 221 gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~-~~~i~~~~~~~g~~~~~~ 297 (440)
||++|..+++|||+|...++|++++++|..++++... .+..|.||+++ ++.|||+||. .++|++++.
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~-~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~--------- 152 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQ-ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM--------- 152 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEET---------
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeC-CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEc---------
Confidence 9999999999999999999999999999998888753 27899999998 4699999985 455555554
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCC
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTS 377 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~ 377 (440)
+|. .. ..+.-.++..|.||++|+.++.|||+|...
T Consensus 153 ------------------------------------------dG~-~~--~~~~~~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 153 ------------------------------------------DGS-SR--FIIINSEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp ------------------------------------------TSC-SC--EEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred ------------------------------------------CCC-Ce--EEEEECCCCCccEEEEeccCCEEEEEECCC
Confidence 332 00 011112456799999999999999999999
Q ss_pred CeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe-CCCeeeEEee
Q psy14258 378 YVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKI-SDFSIRKVLY 438 (440)
Q Consensus 378 ~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~-~g~~~~~~l~ 438 (440)
++|++++++|+.+++++...+..|.|||+| ++.|||+|..+++|.+++. +| +..++|.
T Consensus 188 ~~I~~~d~dG~~~~~~~~~~~~~P~glav~--~~~lywtd~~~~~V~~~~~~~G-~~~~~i~ 246 (318)
T 3sov_A 188 NFIHKSNLDGTNRQAVVKGSLPHPFALTLF--EDILYWTDWSTHSILACNKYTG-EGLREIH 246 (318)
T ss_dssp TEEEEEETTSCSCEEEECSCCSCEEEEEEE--TTEEEEEETTTTEEEEEETTTC-CSCEEEE
T ss_pred CEEEEEcCCCCceEEEecCCCCCceEEEEe--CCEEEEEecCCCeEEEEECCCC-CceEEEe
Confidence 999999999999998887678999999998 7899999999999999998 67 5555554
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.97 E-value=1.8e-28 Score=234.42 Aligned_cols=232 Identities=17% Similarity=0.261 Sum_probs=187.1
Q ss_pred cEEEe--ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC----CCceeEEecCccCc
Q psy14258 146 KIVYP--EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG----TERFPMVTHKIVYP 219 (440)
Q Consensus 146 ~lY~~--~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG----~~~~~l~~~~~~~P 219 (440)
.|+|+ +.|.+.++++.....++. .+..|.++++|+..+.|||+|... .+|.+++++| +..+.++...+..|
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQ--RMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTT--TEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEECCCeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCC--CcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 37777 789999999987666654 678999999999999999999886 5999999998 55566666667899
Q ss_pred eEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCC-CeEEEEeccCCCceEE
Q psy14258 220 YGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRN-QSIIRVNKFNSDDYET 296 (440)
Q Consensus 220 ~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~-~~i~~~~~~~g~~~~~ 296 (440)
.||++|..+++|||+|...++|.+++++|..++++... .+..|.+|+++ ++.|||+|+.. ++|++++.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~-------- 150 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE-NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL-------- 150 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC-TTCCEEEEEEETTTTEEEEEECSSSCEEEEEET--------
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC-CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC--------
Confidence 99999988999999999999999999999988877763 27899999998 56999999864 56665554
Q ss_pred EecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECC
Q psy14258 297 IANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELT 376 (440)
Q Consensus 297 ~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~ 376 (440)
++. .. ..+....+..|.||++|+.+++|||+|..
T Consensus 151 -------------------------------------------dG~-~~--~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 151 -------------------------------------------NGV-DI--YSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp -------------------------------------------TSC-CE--EEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred -------------------------------------------CCC-Ce--EEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 222 00 00111235679999999999999999999
Q ss_pred CCeEEEEecCCCCeEEEEEC--CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe-CCCeeeEEee
Q psy14258 377 SYVIERRKMFGRGKEVVIDT--GIYNVEGMAVDWMANNLYWTDAGIGTINVAKI-SDFSIRKVLY 438 (440)
Q Consensus 377 ~~~I~r~~~~g~~~~~~~~~--~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~-~g~~~~~~l~ 438 (440)
.++|++++++|+.+++++.. .+..|.|||+| +++|||+|.++++|.+++. +| +..++|.
T Consensus 185 ~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g-~~~~~i~ 246 (316)
T 1ijq_A 185 LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTG-SDVNLLA 246 (316)
T ss_dssp TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTC-CCCEEEE
T ss_pred CCeEEEEecCCCceEEEeecCCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCC-cceEEEe
Confidence 99999999999988888763 47889999998 6899999999999999996 67 5455554
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.96 E-value=1e-25 Score=209.87 Aligned_cols=253 Identities=18% Similarity=0.198 Sum_probs=200.1
Q ss_pred cEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEE
Q psy14258 93 HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAI 167 (440)
Q Consensus 93 ~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~ 167 (440)
..|||++. ++|+++.+++.....+. ....+......|++ |+|+.+++|||+ ++|.+++++|...+.++
T Consensus 2 ~~l~~~~~--~~I~~~~~~g~~~~~~~-----~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 2 THLLFAQT--GKIERLPLERNTMKKTE-----AKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp EEEEEEEE--EEEEEEEESSSCBCGGG-----CEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEE
T ss_pred cEEEEEcC--CeEEEEEecCccccccc-----ceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEE
Confidence 46899986 48999999876543210 00123334568999 999999999999 79999999998877777
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC--CCcEEEEE
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY--LDFIDRIN 245 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~--~~~i~~~~ 245 (440)
...+..|.+|++|+.+++|||+|... .+|.+.+++|..++.+....+..|+++++|+.+++|||+|.. .++|++++
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~--~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQL--DRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTT--TEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCC--CEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 66778999999999889999999886 599999999998877776667899999999889999999987 57999999
Q ss_pred ccCCCcEEEecCCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCcee
Q psy14258 246 YDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTF 323 (440)
Q Consensus 246 ~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~ 323 (440)
++|...+.+... .+..|.||+++. ++|||+|...++|.+++..++....++.....|.++.+. +++
T Consensus 153 ~dg~~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-----------~~~ 220 (267)
T 1npe_A 153 MDGTNRRILAQD-NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-----------GKN 220 (267)
T ss_dssp TTSCCCEEEECT-TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-----------TTE
T ss_pred cCCCCcEEEEEC-CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-----------CCE
Confidence 999888777643 267899999984 599999999999999998654433455566689998765 578
Q ss_pred EEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCC
Q psy14258 324 LLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEE 368 (440)
Q Consensus 324 l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~ 368 (440)
||+++...++|.+++.++. .. ...++......|.+|++.+...
T Consensus 221 lyva~~~~~~v~~~d~~~g-~~-~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 221 LYYTDWKTNSVIAMDLAIS-KE-MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTTTEEEEEETTTT-EE-EEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEECCCCeEEEEeCCCC-Cc-eEEEccccccccceeeecCccC
Confidence 9999988899999998754 11 1223333344699999987643
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.95 E-value=1.4e-28 Score=258.81 Aligned_cols=322 Identities=16% Similarity=0.219 Sum_probs=221.4
Q ss_pred ecccCCC-CCCCCCCcccCCCceEEc-cCCeeeecceeEEEEeecccceeee---EEEecCCCcee------eeeecccc
Q psy14258 13 DADECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQGVKTHLYETIEAFWEECF---GPMDIEEWDEG------LSFLTFAQ 81 (440)
Q Consensus 13 d~~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~~~~ll~s~~~~~~~~~I---~~~~l~~~~~~------~~~~~~~~ 81 (440)
+++||.. ++.|+|.|.|++++|.|. +.||.+.+. ...- +.+++-.... .=++..+. +. ........
T Consensus 293 ~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~-~~C~-dideC~~~~~C~~~C~n~~g~-y~C~C~~G~~~~~~~~ 369 (699)
T 1n7d_A 293 GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQ-RRCE-DIDECQDPDTCSQLCVNLEGG-YKCQCEEGFQLDPHTK 369 (699)
T ss_dssp CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSS-SCCC-CCCCCSSSSSCTTTCCBCSSC-BCCCCCSSCBCCSSCC
T ss_pred ccccccccccCcCCCcccCCCCcEEeCCCCeEcCCC-Cccc-CccccCCCCccccccccCCCC-eeeeeecccccCCCCC
Confidence 5788885 578999999999999999 999987220 0000 0011000000 00011111 10 01100000
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFC 156 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~ 156 (440)
.-. +.+ ....|++++. +.|+++.+++..... +...+..|.+ |+|+..+.|||+ ++|.++
T Consensus 370 ~C~--~~~-~~~~ll~~~~--~~I~~id~~~~~~~~-----------~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~ 433 (699)
T 1n7d_A 370 ACK--AVG-SIAYLFFTNR--HEVRKMTLDRSEYTS-----------LIPNLRNVVALDTEVASNRIYWSDLSQRMICST 433 (699)
T ss_dssp CCB--CCS-SCCCBCCCCT--TC-CEECTTSCCEEC-----------CSCCCTTCCCCEEETTTTEEEECCTTTTSBEEE
T ss_pred ccc--ccc-cceeEEecCc--cceEEEeCCCCccee-----------eeccCcceEEEccccccCeEEEEecCCCeEEEE
Confidence 011 111 2244666654 567777766543221 2356788999 999999999999 789999
Q ss_pred ecCC----ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEE
Q psy14258 157 THYM----EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVY 232 (440)
Q Consensus 157 ~~dg----~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly 232 (440)
+++| +..+.++...+..|.|||||+..|.|||+|... .+|.+++++|..+++++...+..|+||++|+.+++||
T Consensus 434 ~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~--~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 434 QLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVL--GTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp ESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTT--SCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCE
T ss_pred ecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccC--CeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEE
Confidence 9997 455555555778999999999899999999876 5999999999998888877788999999999999999
Q ss_pred EEeCCC-CcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEe
Q psy14258 233 WVDTYL-DFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIY 309 (440)
Q Consensus 233 ~~d~~~-~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~ 309 (440)
|+|... ++|++++++|+.++++... .+..|.||+++ +++|||+|+..++|.+++.. |....++.
T Consensus 512 ~td~~~~~~I~~~~~dG~~~~~l~~~-~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d-G~~~~~~~----------- 578 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVDIYSLVTE-NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTIL----------- 578 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCCCCEESCS-SCSSCCCEEECTTTCCEEEEETTTTEEEEECSS-SSCCEEEC-----------
T ss_pred EcccCCCCeEEEEeCCCCCeeEEEeC-CCCCccEEEEeccCCEEEEEecCCCeEEEEccC-CCceEEEE-----------
Confidence 999876 7999999999988877653 27899999997 56999999998899888764 22111100
Q ss_pred ccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC-CC
Q psy14258 310 HRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF-GR 388 (440)
Q Consensus 310 ~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~-g~ 388 (440)
.. ...+..|.+|++|. +.|||+|...++|.+++.. |.
T Consensus 579 ------------------------------~~----------~~~~~~P~glavd~--~~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 579 ------------------------------ED----------EKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp ------------------------------CC----------SSSCSSCCCCEEET--TEEEEECSTTTCEEEEETTTEE
T ss_pred ------------------------------ec----------CCcCCCceEeEEEC--CEEEEEeCCCCeEEEEEccCCC
Confidence 00 01245788999985 5899999999999999975 54
Q ss_pred CeEEEEECCCCCeeeEEEecCCC
Q psy14258 389 GKEVVIDTGIYNVEGMAVDWMAN 411 (440)
Q Consensus 389 ~~~~~~~~~~~~~~glAvD~~~~ 411 (440)
..++ +..++..|.+|++-...+
T Consensus 617 ~~~~-i~~~~~~P~~i~v~~~~~ 638 (699)
T 1n7d_A 617 DVNL-LAENLLSPEDMVLFHQLT 638 (699)
T ss_dssp EEEC-CCTTCSSCCCCCBCSSSS
T ss_pred ceEE-eecCCCCCcEEEEeCccc
Confidence 4433 345677899998865444
No 21
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=2.3e-21 Score=192.80 Aligned_cols=258 Identities=12% Similarity=0.049 Sum_probs=189.1
Q ss_pred ccccccce-eeee-cCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC--CCcEEEEeC
Q psy14258 131 RSLLDGTE-RFPM-VTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT--RPMLERSLL 203 (440)
Q Consensus 131 ~~~~~p~~-avD~-~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~--~~~I~r~~~ 203 (440)
..+..|.+ |+|+ ..++||++ ++|.+.++++...+.+.. ....|.+|++|+..++||++|.... ...+.....
T Consensus 134 ~~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 134 GGFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp BCCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred cCCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 35789999 9998 57889999 689999999987776655 6788999999997667999998532 135777888
Q ss_pred CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCC
Q psy14258 204 DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQ 281 (440)
Q Consensus 204 dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~ 281 (440)
+|..........+.+|.++++|+.+++|||+|...++|.+++.++.....+........|.+|+++.+ +|||+|..++
T Consensus 213 ~g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~ 292 (430)
T 3tc9_A 213 ESGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQH 292 (430)
T ss_dssp GGTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTT
T ss_pred CCceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCC
Confidence 88655211112467899999998799999999999999999999876644443212467999999754 6999999999
Q ss_pred eEEEEeccCCCc----eEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCC
Q psy14258 282 SIIRVNKFNSDD----YETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKR 357 (440)
Q Consensus 282 ~i~~~~~~~g~~----~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~ 357 (440)
.|++++...... ..++.+.. . ..+.. +.......+..
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~---------------------------g-----------~~g~~-dg~~~~a~~~~ 333 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQ---------------------------G-----------AKDWV-DGVGKKARMHA 333 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECT---------------------------T-----------CBCCB-CEEGGGCBBSS
T ss_pred EEEEEeCCcccccccceEEEeccC---------------------------C-----------CCCCC-CCCCcceEeCC
Confidence 999988643211 01111000 0 00000 11111224568
Q ss_pred ce-EEEEEc-------CCCEEEEEECCCCeEEEEecCCCCeEEEEEC----------C-------CCCeeeEEEecCCCc
Q psy14258 358 PS-VIDYHE-------KEEYIYYAELTSYVIERRKMFGRGKEVVIDT----------G-------IYNVEGMAVDWMANN 412 (440)
Q Consensus 358 p~-~l~~d~-------~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~----------~-------~~~~~glAvD~~~~~ 412 (440)
|. +++++. .++.|||+|...++|++++.+|. ..++... + +..|.|||+|..+++
T Consensus 334 P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~~G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 412 (430)
T 3tc9_A 334 PRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTPQGR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEEREC 412 (430)
T ss_dssp EEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECTTSE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred CcceEEEccccccccCCCCeEEEEECCCcEEEEECCCCc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCE
Confidence 98 888863 35789999999999999998883 4444432 1 557999999987899
Q ss_pred EEEEeCCCCeEEEEEeC
Q psy14258 413 LYWTDAGIGTINVAKIS 429 (440)
Q Consensus 413 lYwtd~~~~~I~~~~~~ 429 (440)
||++|.++++|.+++++
T Consensus 413 lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 413 FFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEGGGTEEEEEEEC
T ss_pred EEEEECCCCeEEEEccC
Confidence 99999999999999886
No 22
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.89 E-value=1.5e-21 Score=194.10 Aligned_cols=250 Identities=13% Similarity=0.139 Sum_probs=183.4
Q ss_pred EEEEEeee-cccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe-c-------e
Q psy14258 83 AIYFCTHY-MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP-E-------A 152 (440)
Q Consensus 83 ~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~-~-------~ 152 (440)
|.+|++|+ .++.||++|.. ++|+++++++..+.. +......|.+ |+|+.++.|||+ . .
T Consensus 139 P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~-----------~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~ 206 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVST-----------VYSGLSKVRTICWTHEADSMIITNDQNNNDRPN 206 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEE-----------EECCCSCEEEEEECTTSSEEEEEECCSCTTSEE
T ss_pred CCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEE-----------EecCCCCcceEEEeCCCCEEEEEeCCCCcccce
Confidence 99999998 58999999998 888888877644322 2346778999 999988889999 2 5
Q ss_pred EEEEecCCceE--EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec-CccCceEEEEeCCCC
Q psy14258 153 IYFCTHYMEHC--MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH-KIVYPYGVTVDFPTK 229 (440)
Q Consensus 153 I~~~~~dg~~~--~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~-~~~~P~gl~vD~~~~ 229 (440)
+.+.+.+|... ..+. .+..|.+|++||..|+|||+|++. ++|++.++++.....+... ...+|++|++|+.++
T Consensus 207 v~~~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~--~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 207 NYILTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWNA--GQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp EEEEEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTT--TEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSS
T ss_pred EEEEeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCC--CEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCC
Confidence 67778787654 3332 468899999999889999999987 5999999998766444443 346899999998888
Q ss_pred EEEEEeCCCCcEEEEEccCCC-----cEEEecC-------------CccCcee-eeeEec---------CEEEEEecCCC
Q psy14258 230 HVYWVDTYLDFIDRINYDGTD-----RKTIRKG-------------FPVQNLY-DITVFE---------NNLFVTSWRNQ 281 (440)
Q Consensus 230 ~ly~~d~~~~~i~~~~~dG~~-----~~~i~~~-------------~~~~~p~-gl~~~~---------~~ly~td~~~~ 281 (440)
+|||+|...++|.+++++|.. +.++... ..+.+|. |+++.+ +.||++|+.++
T Consensus 283 ~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~ 362 (430)
T 3tc9_A 283 YAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENH 362 (430)
T ss_dssp EEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGT
T ss_pred EEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCc
Confidence 899999999999999999752 2233211 1367899 899863 49999999999
Q ss_pred eEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEE
Q psy14258 282 SIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVI 361 (440)
Q Consensus 282 ~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l 361 (440)
+|.+++. +|....+...... . ..+ ...........+..|.+|
T Consensus 363 ~I~~i~~-~G~v~~~~g~g~~--------------------------~---------~~G--~~dG~~~~~~~~~~P~gi 404 (430)
T 3tc9_A 363 CIRILTP-QGRVTTFAGRGSN--------------------------G---------TSG--YNDGDLRQEARFNHPEGI 404 (430)
T ss_dssp EEEEECT-TSEEEEEEECCTT--------------------------S---------SSS--CBCEETTTTCBCSSEEEE
T ss_pred EEEEECC-CCcEEEEEeCCCC--------------------------C---------CCc--ccCCCchhhcEeCCCcEE
Confidence 9999885 3422211111000 0 000 000000011236689999
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
++|+.++.||++|...++|+++.++
T Consensus 405 avd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 405 VYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEECCCCEEEEEECCCCeEEEEccC
Confidence 9999889999999999999999875
No 23
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.89 E-value=1.7e-21 Score=183.89 Aligned_cols=198 Identities=8% Similarity=0.062 Sum_probs=156.3
Q ss_pred eeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEE---cCCCCceeEEeCCCCCcceeeccccccceeeccccccc
Q psy14258 61 CFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAID---LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT 137 (440)
Q Consensus 61 ~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d---~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~ 137 (440)
.|++++++|...+..... .+.++.+.+++|||++ .....|+++.++|+..+.+ . .. .
T Consensus 89 ~Iy~i~~dg~~~~~l~~~-----~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~l----------t-~~----~ 148 (302)
T 3s25_A 89 SLCRIKRNGHGSTVLDPD-----PCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKI----------K-NH----Y 148 (302)
T ss_dssp EEEEEETTSCCCEEEECS-----CEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEE----------E-SS----C
T ss_pred eEEEEeCCCCcceEeecC-----CccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEE----------e-CC----C
Confidence 499999999976632221 1224556789999999 5667899999998764432 1 11 2
Q ss_pred e-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE
Q psy14258 138 E-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV 212 (440)
Q Consensus 138 ~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~ 212 (440)
. ++||.+++|||+ .+|.+++++|..++.|.. .+..++++|..++|||+++... .+|+|+++||+.++.|.
T Consensus 149 ~~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~----~~~~~~~~P~g~~iy~t~~~~~-~~I~~~~ldG~~~~~Lt 223 (302)
T 3s25_A 149 LFTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD----CNCYKPVVLDDTNVYYMDVNRD-NAIVHVNINNPNPVVLT 223 (302)
T ss_dssp CCCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC----SCEEEEEEEETTEEEEEEGGGT-TEEEEECSSSCCCEECS
T ss_pred ceEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC----CCccceeeecCCEEEEEEcCCC-cEEEEEECCCCCeEEEe
Confidence 2 689999999999 689999999999887754 2445667788999999999865 79999999999998887
Q ss_pred ecCccCceEEEEeCCCCEEEEE-eCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCC
Q psy14258 213 THKIVYPYGVTVDFPTKHVYWV-DTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 213 ~~~~~~P~gl~vD~~~~~ly~~-d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g 291 (440)
...+ |. +|+.+++|||+ +...+.|+++++||++++.+..+ ...++++++++|||+||..+.|++++. .|
T Consensus 224 ~~~~--~~---~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~----~~~~i~i~~d~Iy~td~~~~~i~~~~~-dG 293 (302)
T 3s25_A 224 EANI--EH---YNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG----EFCNINVTSQYVYFTDFVSNKEYCTST-QN 293 (302)
T ss_dssp CSCE--EE---EEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES----CEEEEEECSSEEEEEETTTCCEEEEES-SS
T ss_pred CCCc--ce---EEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC----ccceEEEeCCEEEEEECCCCeEEEEEC-CC
Confidence 6554 33 66679999997 56678999999999999988765 245899999999999999999999875 44
Q ss_pred Cc
Q psy14258 292 DD 293 (440)
Q Consensus 292 ~~ 293 (440)
..
T Consensus 294 s~ 295 (302)
T 3s25_A 294 PD 295 (302)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 24
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.88 E-value=4.3e-21 Score=190.76 Aligned_cols=250 Identities=10% Similarity=0.106 Sum_probs=177.2
Q ss_pred EEEEEeeec--ccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEec--------
Q psy14258 83 AIYFCTHYM--EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYPE-------- 151 (440)
Q Consensus 83 ~~~i~~d~~--~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~~-------- 151 (440)
|.+|++|+. ++.|||+|.. ++|+++++....+.. +...+..|.+ |+|+.++ |||++
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~-----------~~~~~~~P~giavd~dG~-lyVad~~~~~~~~ 207 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDI-----------KTTNIGQCADVNFTLNGD-MVVVDDQSSDTNT 207 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEE-----------ECCCCSCEEEEEECTTCC-EEEEECCSCTTSE
T ss_pred CceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEE-----------eecCCCCccEEEECCCCC-EEEEcCCCCcccc
Confidence 999999984 7999999998 889988875433222 2346778999 9999888 99991
Q ss_pred eEEEEecCCceE-EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC-CCCceeEEec-CccCceEEEEeCCC
Q psy14258 152 AIYFCTHYMEHC-MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTERFPMVTH-KIVYPYGVTVDFPT 228 (440)
Q Consensus 152 ~I~~~~~dg~~~-~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d-G~~~~~l~~~-~~~~P~gl~vD~~~ 228 (440)
.+.....++... ...+. .+..|.+|++||..|.|||+|... ++|.+.+++ |...+.+... ...+|.+|++|+.+
T Consensus 208 gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~--~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 208 GIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHH--AMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG 284 (433)
T ss_dssp EEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTC--SEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS
T ss_pred eEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCC--CEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC
Confidence 255555554432 12222 578999999999889999999886 599999998 5542444432 34567899999888
Q ss_pred CEEEEEeCCCCcEEEEEccCCC-----cEEEecC-------------CccCceeeeeE---------ec-CEEEEEecCC
Q psy14258 229 KHVYWVDTYLDFIDRINYDGTD-----RKTIRKG-------------FPVQNLYDITV---------FE-NNLFVTSWRN 280 (440)
Q Consensus 229 ~~ly~~d~~~~~i~~~~~dG~~-----~~~i~~~-------------~~~~~p~gl~~---------~~-~~ly~td~~~ 280 (440)
++||++|...++|.++++++.. +.++... ..+.+|.|+++ +. +.||++|+.+
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n 364 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS 364 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC
Confidence 8899999999999999988532 2233221 13678999999 44 4999999999
Q ss_pred CeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceE
Q psy14258 281 QSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSV 360 (440)
Q Consensus 281 ~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~ 360 (440)
++|.++++ +|. ..++.+... ..++ +. .++. ......+..|.+
T Consensus 365 ~~I~~~~~-~G~-v~t~~G~g~---------~~~~----------------G~-----~dG~------~~~~~~~~~P~g 406 (433)
T 4hw6_A 365 HTVRVLTP-EGR-VTTYAGRGN---------SREW----------------GY-----VDGE------LRSQALFNHPTS 406 (433)
T ss_dssp TEEEEECT-TSE-EEEEECCCT---------TCSS----------------CC-----BCEE------TTTTCBCSSEEE
T ss_pred CEEEEECC-CCC-EEEEEeCCC---------CCcc----------------cc-----CCCc------cccccEeCCCcE
Confidence 99999986 442 222222110 0000 00 0110 001124678999
Q ss_pred EEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 361 IDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 361 l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
|++|+.++.||++|...++|+++.++
T Consensus 407 iavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 407 IAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEECCCCEEEEEeCCCCEEEEEecC
Confidence 99997789999999999999999875
No 25
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.88 E-value=1.9e-20 Score=186.10 Aligned_cols=256 Identities=10% Similarity=-0.005 Sum_probs=181.0
Q ss_pred cccccce-eeeec--CCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC--CCcEEEEeC
Q psy14258 132 SLLDGTE-RFPMV--THKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT--RPMLERSLL 203 (440)
Q Consensus 132 ~~~~p~~-avD~~--~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~--~~~I~r~~~ 203 (440)
.+..|.+ |+|+. .++|||+ ++|.+.++++.....+. ..+..|.+|++|+. |.||++|.... ...+.+...
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~d-G~lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTLN-GDMVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECTT-CCEEEEECCSCTTSEEEEEECG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECCC-CCEEEEcCCCCcccceEEEEEC
Confidence 6789999 99984 7889999 68999999665655554 37788999999995 55999997531 124666666
Q ss_pred CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc-EEEecCCccCceeeeeEecC--EEEEEecCC
Q psy14258 204 DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR-KTIRKGFPVQNLYDITVFEN--NLFVTSWRN 280 (440)
Q Consensus 204 dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~-~~i~~~~~~~~p~gl~~~~~--~ly~td~~~ 280 (440)
++..........+..|+++++|+.+++|||+|...++|++++.++... ..+........+++|++..+ .||++|..+
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 554432111224788999999987999999999999999999984333 44443212455778998754 799999999
Q ss_pred CeEEEEeccC--CCc--eEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCC
Q psy14258 281 QSIIRVNKFN--SDD--YETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLK 356 (440)
Q Consensus 281 ~~i~~~~~~~--g~~--~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~ 356 (440)
++|++++... +.. ..++.+.. . ..+.. +.......+.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~---------------------------g-----------~~g~~-dg~~~~a~~~ 335 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQH---------------------------S-----------SPGWV-DGMGTGARLW 335 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECT---------------------------T-----------CCCCB-CEEGGGSBCS
T ss_pred CEEEEEeCCCCCcccCcEEEEEecC---------------------------C-----------CCccC-CCcccceEEc
Confidence 9999987542 211 01111000 0 00000 1111123466
Q ss_pred CceEEEE--------EcCCCEEEEEECCCCeEEEEecCCCCeEEEEEC-----------------CCCCeeeEEEecCCC
Q psy14258 357 RPSVIDY--------HEKEEYIYYAELTSYVIERRKMFGRGKEVVIDT-----------------GIYNVEGMAVDWMAN 411 (440)
Q Consensus 357 ~p~~l~~--------d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~-----------------~~~~~~glAvD~~~~ 411 (440)
.|.++++ |..++.|||+|...++|.+++++| ...++... .+..|.|||+|...+
T Consensus 336 ~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g 414 (433)
T 4hw6_A 336 GPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRK 414 (433)
T ss_dssp SEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTT
T ss_pred CCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCC
Confidence 8999999 234678999999999999999988 34444321 146799999997789
Q ss_pred cEEEEeCCCCeEEEEEeC
Q psy14258 412 NLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 412 ~lYwtd~~~~~I~~~~~~ 429 (440)
+||++|.++++|.+++++
T Consensus 415 ~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 415 CFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEecC
Confidence 999999999999999875
No 26
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.87 E-value=1.6e-19 Score=178.53 Aligned_cols=236 Identities=11% Similarity=0.032 Sum_probs=180.2
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCC-cEEEEEccC
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLD-FIDRINYDG 248 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~-~i~~~~~dG 248 (440)
.+..|.+|++|+ .|.|||+|... .+|.+.++++.....+... ...|. +++++.++.|||++...+ .|..++.++
T Consensus 129 ~~~~P~~la~d~-~g~lyv~d~~~--~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 129 KFKYMWGIAAVG-NNTVLAYQRDD--PRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCCCEEEEEECS-TTEEEEEETTT--TEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred ccCCceEEEEeC-CCCEEEEecCC--CcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 578999999998 68899999875 5999999997666655543 45677 999999999999998665 899999887
Q ss_pred CCc-EEEec--CCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEe-----c--CCCCe-EEEEeccCCCC
Q psy14258 249 TDR-KTIRK--GFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIA-----N--FSRPF-AIHIYHRQKQP 315 (440)
Q Consensus 249 ~~~-~~i~~--~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~-----~--~~~p~-~~~v~~~~~qp 315 (440)
... ..+.. ......|.+++++. +.||+++. ++.|++++..++. ..++. . ...|. ++++.
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~-~~~~~~~~~~g~~~~~P~~~ia~~------ 275 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQE-VTLIKQLELSGSLGTNPGPYLIYY------ 275 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCC-EEEEEECCCCSCCCCSSCCEEEEE------
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCC-EEEEecccccCCCCCCccccEEEe------
Confidence 654 33311 11367899999986 59999886 7899999987654 33331 1 11356 77766
Q ss_pred CCCCC-ceeEEeecCCccEEEEEEcCCCCCCceeeeee--------------cCCCCceEEEEEcCCCEEEEEEC-CCCe
Q psy14258 316 DALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI--------------TDLKRPSVIDYHEKEEYIYYAEL-TSYV 379 (440)
Q Consensus 316 ~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~--------------~~~~~p~~l~~d~~~~~vy~~d~-~~~~ 379 (440)
| ++.||+++...++|++++.++. ...+.- ..+..|.+|++|+.+. ||++|. ..++
T Consensus 276 ----p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~ 346 (409)
T 3hrp_A 276 ----FVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYC 346 (409)
T ss_dssp ----TTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCE
T ss_pred ----CCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCE
Confidence 4 4889999998899999998875 111111 1256799999999766 999999 9999
Q ss_pred EEEEe-cCCCCeEEEEEC--------------CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 380 IERRK-MFGRGKEVVIDT--------------GIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 380 I~r~~-~~g~~~~~~~~~--------------~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
|++++ .+| ...++... .+..|.|||+|.. ++||++|..+++|.+++++
T Consensus 347 I~~~~~~~G-~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 347 LRKLDILDG-YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EEEEETTTT-EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred EEEEECCCC-EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 99999 455 34455442 1678999999976 8999999999999999874
No 27
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.87 E-value=2.2e-19 Score=169.48 Aligned_cols=258 Identities=11% Similarity=0.129 Sum_probs=189.5
Q ss_pred ecCCcEEEe-----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC-----------CCCcEEEEeCCC
Q psy14258 142 MVTHKIVYP-----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA-----------TRPMLERSLLDG 205 (440)
Q Consensus 142 ~~~~~lY~~-----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~-----------~~~~I~r~~~dG 205 (440)
..++.||+. .+|.+++.||+..+.|.. ..+.-|.++ .++||+++... +...|.++++||
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~---~~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSN---DTAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEE---EEEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccC---CceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 468899999 689999999998877754 346777665 59999998653 125899999999
Q ss_pred CCceeEEecCccCceEEEEeCCCCEEEEEe---CCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCe
Q psy14258 206 TERFPMVTHKIVYPYGVTVDFPTKHVYWVD---TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQS 282 (440)
Q Consensus 206 ~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d---~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~ 282 (440)
+.++.|.... . ..+++ .+++|||++ .....|+++++||++++.+.... . . .+...++.|||++.....
T Consensus 98 ~~~~~l~~~~-~--~~~s~--~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~-~-~--~~~~~g~~iy~t~~g~~~ 168 (302)
T 3s25_A 98 HGSTVLDPDP-C--IYASL--IGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHY-L-F--TCNTSDRYFYYNNPKNGQ 168 (302)
T ss_dssp CCCEEEECSC-E--EEEEE--ETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSC-C-C--CSEEETTEEEEECTTTCC
T ss_pred CcceEeecCC-c--cEEEE--eCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCC-c-e--EeeEECCEEEEEeCCCce
Confidence 9987665432 1 23455 599999999 56779999999999999887753 2 2 347789999999988889
Q ss_pred EEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCC-ccEEEEEEcCCCCCCceeeeeecCCCCceEE
Q psy14258 283 IIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGK-PAIIKGLTFKRDGTTEQAIMPITDLKRPSVI 361 (440)
Q Consensus 283 i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l 361 (440)
|++++..++ ..+.+.. .+....+. | ..++|+|++.. ...|.++.+++. .. .+.... .. .
T Consensus 169 Iy~~~l~g~-~~~~l~~--~~~~~~~~-----P----~g~~iy~t~~~~~~~I~~~~ldG~-~~---~~Lt~~-~~---~ 228 (302)
T 3s25_A 169 LYRYDTASQ-SEALFYD--CNCYKPVV-----L----DDTNVYYMDVNRDNAIVHVNINNP-NP---VVLTEA-NI---E 228 (302)
T ss_dssp EEEEETTTT-EEEEEEC--SCEEEEEE-----E----ETTEEEEEEGGGTTEEEEECSSSC-CC---EECSCS-CE---E
T ss_pred EEEEECCCC-CEEEEeC--CCccceee-----e----cCCEEEEEEcCCCcEEEEEECCCC-Ce---EEEeCC-Cc---c
Confidence 999997544 4444432 22222221 1 14789998754 258999999998 22 111111 11 2
Q ss_pred EEEcCCCEEEEE-ECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCeeeEEeee
Q psy14258 362 DYHEKEEYIYYA-ELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDFSIRKVLYK 439 (440)
Q Consensus 362 ~~d~~~~~vy~~-d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~~l~~ 439 (440)
.+++.+++|||+ +.....|+++++||+.++++... ...+| ...++.|||+|...+.|.+++++| +.+..|++
T Consensus 229 ~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~---~~~~i--~i~~d~Iy~td~~~~~i~~~~~dG-s~~~~l~~ 301 (302)
T 3s25_A 229 HYNVYGSLIFYQRGGDNPALCVVKNDGTGFKELAKG---EFCNI--NVTSQYVYFTDFVSNKEYCTSTQN-PDTIKALQ 301 (302)
T ss_dssp EEEEETTEEEEEECSSSCEEEEEETTSCCCEEEEES---CEEEE--EECSSEEEEEETTTCCEEEEESSS-CCSCEECC
T ss_pred eEEECCCEEEEEECCCCcEEEEEECCCCccEEeeCC---ccceE--EEeCCEEEEEECCCCeEEEEECCC-CCceEecC
Confidence 377889999998 55578999999999999888763 23444 456999999999888999999999 66666653
No 28
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=2.2e-19 Score=178.67 Aligned_cols=259 Identities=12% Similarity=0.087 Sum_probs=187.6
Q ss_pred ccccccce-eeee-cCCcEEEe----ceEEEEecCCceEEEEEcCC---CCCceEEEE-------cCCCCeEEEEEcCCC
Q psy14258 131 RSLLDGTE-RFPM-VTHKIVYP----EAIYFCTHYMEHCMIAIDLN---LSKPRGIAL-------DPTSGYMFFTKWGAT 194 (440)
Q Consensus 131 ~~~~~p~~-avD~-~~~~lY~~----~~I~~~~~dg~~~~~~~~~~---~~~P~~iav-------d~~~g~lywtd~~~~ 194 (440)
..+..|.+ |+|+ ..++||++ ++|.+.++.+....+++... +..|++|++ |+..++||++++...
T Consensus 136 ~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~ 215 (496)
T 3kya_A 136 CGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDG 215 (496)
T ss_dssp BCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCT
T ss_pred cccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCC
Confidence 45778999 9998 58889999 68999999998888887642 467999999 997667999998752
Q ss_pred ----CCcEEEEeCC--CCCce----eEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-------CCCc------
Q psy14258 195 ----RPMLERSLLD--GTERF----PMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-------GTDR------ 251 (440)
Q Consensus 195 ----~~~I~r~~~d--G~~~~----~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-------G~~~------ 251 (440)
...|.+.+.+ |.-.. ..+. ...+|+|+++|+.+++||++|...+.|.+++++ +...
T Consensus 216 ~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 216 KGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp TGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred CcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 1347777443 34321 2333 467899999999899999999999999999987 3332
Q ss_pred ------EEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCce----EEEecCCCCeEEEEeccCCCCCCCC
Q psy14258 252 ------KTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDY----ETIANFSRPFAIHIYHRQKQPDALK 319 (440)
Q Consensus 252 ------~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~----~~~~~~~~p~~~~v~~~~~qp~~~~ 319 (440)
+.+........|++|++..+ .||++|..+++|++++....... .++.+..
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~------------------ 356 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGY------------------ 356 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBT------------------
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCC------------------
Confidence 23332112457999999854 69999999999999876421110 1111100
Q ss_pred CceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCce-EEEEEc------CCCEEEEEECCCCeEEEEecCCCCeEE
Q psy14258 320 PSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPS-VIDYHE------KEEYIYYAELTSYVIERRKMFGRGKEV 392 (440)
Q Consensus 320 ~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~-~l~~d~------~~~~vy~~d~~~~~I~r~~~~g~~~~~ 392 (440)
+..+. .|+ ......+..|. ++++|. .++.||+||...++|++++.+| ...+
T Consensus 357 ---------g~~G~-----~DG-------~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~G-~v~T 414 (496)
T 3kya_A 357 ---------KQSGY-----RDD-------VGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPEG-IVST 414 (496)
T ss_dssp ---------TBCCC-----BCC-------BGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTTC-BEEE
T ss_pred ---------CCCcc-----cCC-------cccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeCCC-CEEE
Confidence 00000 011 11123567899 777773 4678999999999999999988 4555
Q ss_pred EEEC-----------------------CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 393 VIDT-----------------------GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 393 ~~~~-----------------------~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++.. .+..|.|||+|..+++||++|.++++|+++++++
T Consensus 415 iaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~ 475 (496)
T 3kya_A 415 YAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQ 475 (496)
T ss_dssp EEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECC
T ss_pred EecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCC
Confidence 5542 1567999999987689999999999999999998
No 29
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=5.4e-20 Score=176.45 Aligned_cols=249 Identities=12% Similarity=0.033 Sum_probs=180.0
Q ss_pred ccccccce-eeeecCCcEEEe---c-------------------------eEEEEecC-CceEEEEEcCCCCCceEEEEc
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP---E-------------------------AIYFCTHY-MEHCMIAIDLNLSKPRGIALD 180 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~---~-------------------------~I~~~~~d-g~~~~~~~~~~~~~P~~iavd 180 (440)
..+..|.+ |+|+.+ +||++ + +|.+.+.+ |+.........+..|.+|++|
T Consensus 21 ~~l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d 99 (329)
T 3fvz_A 21 LLPGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSID 99 (329)
T ss_dssp CCCSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEEC
T ss_pred eecCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEEC
Confidence 46788999 999875 69998 3 48888886 665544444557899999999
Q ss_pred CCCCeEEEEEcCCCCCcEEEEeCCCCC--ceeEE--------ecCccCceEEEEeCCCCEEEEEeC-CCCcEEEEEccCC
Q psy14258 181 PTSGYMFFTKWGATRPMLERSLLDGTE--RFPMV--------THKIVYPYGVTVDFPTKHVYWVDT-YLDFIDRINYDGT 249 (440)
Q Consensus 181 ~~~g~lywtd~~~~~~~I~r~~~dG~~--~~~l~--------~~~~~~P~gl~vD~~~~~ly~~d~-~~~~i~~~~~dG~ 249 (440)
+ .|.||+++... .+|.+.+++|.. ...+. ...+..|.+|++|+.+++||++|. ..++|.+++.+|.
T Consensus 100 ~-~g~l~v~d~~~--~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~ 176 (329)
T 3fvz_A 100 T-DGNYWVTDVAL--HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGK 176 (329)
T ss_dssp T-TSCEEEEETTT--TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSC
T ss_pred C-CCCEEEEECCC--CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCC
Confidence 8 68899999876 599999999973 33332 233568999999977999999997 7899999999988
Q ss_pred CcEEEec-C-------CccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCC
Q psy14258 250 DRKTIRK-G-------FPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALK 319 (440)
Q Consensus 250 ~~~~i~~-~-------~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~ 319 (440)
....+.. + ..+..|.+|+++. +.||++|+.+++|.+++..+|+....+.....
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~----------------- 239 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF----------------- 239 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT-----------------
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc-----------------
Confidence 7766642 1 1366799999985 59999999999999998865654332211000
Q ss_pred CceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE---EC
Q psy14258 320 PSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI---DT 396 (440)
Q Consensus 320 ~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~---~~ 396 (440)
. ..++ .+.. .| ++.++..+ .+|+++...++|+..++........+ ..
T Consensus 240 ---------~--~~~~-------------~~~~----~p-g~~~~~~g-~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~ 289 (329)
T 3fvz_A 240 ---------G--RNVF-------------AISY----IP-GFLFAVNG-KPYFGDQEPVQGFVMNFSSGEIIDVFKPVRK 289 (329)
T ss_dssp ---------T--TCEE-------------EEEE----ET-TEEEEEEC-CCCTTCSCCCCEEEEETTTCCEEEEECCSSS
T ss_pred ---------C--CCcc-------------eeee----cC-CEEEEeCC-CEEeccCCCcEEEEEEcCCCeEEEEEcCCCC
Confidence 0 0000 0000 12 44555443 37777777788888886543333333 24
Q ss_pred CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCC
Q psy14258 397 GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDF 431 (440)
Q Consensus 397 ~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~ 431 (440)
.+..|.+||+|..+ +||++|.++++|.+++++|+
T Consensus 290 ~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 290 HFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEEC
T ss_pred ccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCcc
Confidence 67789999999865 99999999999999999984
No 30
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=2e-18 Score=161.85 Aligned_cols=274 Identities=17% Similarity=0.089 Sum_probs=201.0
Q ss_pred ccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 205 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG 205 (440)
.....|.+ ++|.. ++||++ +.|.+.+.+|......+......|.+|++|+ .|.||+++... .+|.+.+.+|
T Consensus 17 ~~~~~p~~i~~d~~-g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~v~~~d~~g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSED-GKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGA--NKIGKLSKKG 92 (300)
T ss_dssp STTCCEEEEEECTT-SCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSCEEEEETTT--TEEEEECTTS
T ss_pred CCCCCcceeeECCC-CCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECC-CCCEEEEecCC--CeEEEECCCC
Confidence 35678999 99976 559988 6899999886655433334457899999997 68999999765 5899999986
Q ss_pred CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEE
Q psy14258 206 TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSII 284 (440)
Q Consensus 206 ~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~ 284 (440)
.............|.+|++| ..++||+++...+.|.+++.+|........ .....|.+++++.+ .||+++...+.|.
T Consensus 93 ~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~ 170 (300)
T 2qc5_A 93 GFTEYPLPQPDSGPYGITEG-LNGDIWFTQLNGDRIGKLTADGTIYEYDLP-NKGSYPAFITLGSDNALWFTENQNNSIG 170 (300)
T ss_dssp CEEEEECSSTTCCEEEEEEC-STTCEEEEETTTTEEEEECTTSCEEEEECS-STTCCEEEEEECTTSSEEEEETTTTEEE
T ss_pred CeEEecCCCCCCCCccceEC-CCCCEEEEccCCCeEEEECCCCCEEEccCC-CCCCCceeEEECCCCCEEEEecCCCeEE
Confidence 54322222234679999999 577899999888899999988544322222 23578999999764 8999998889999
Q ss_pred EEeccCCCceEEEe--cCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee-cCCCCceEE
Q psy14258 285 RVNKFNSDDYETIA--NFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI-TDLKRPSVI 361 (440)
Q Consensus 285 ~~~~~~g~~~~~~~--~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-~~~~~p~~l 361 (440)
+++. +++...... ....|.++.+. +++.|++++...+.|.+++.++. .....+ .....|.+|
T Consensus 171 ~~~~-~g~~~~~~~~~~~~~~~~i~~d----------~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i 235 (300)
T 2qc5_A 171 RITN-TGKLEEYPLPTNAAAPVGITSG----------NDGALWFVEIMGNKIGRITTTGE----ISEYDIPTPNARPHAI 235 (300)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEEC----------TTSSEEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEE
T ss_pred EECC-CCcEEEeeCCCCCCCcceEEEC----------CCCCEEEEccCCCEEEEEcCCCc----EEEEECCCCCCCceEE
Confidence 9998 555444322 23467777665 35678998876688999988544 122222 245689999
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
++|+.+ .||+++...+.|.+++++|.-.+..+..+...|.+|++|.. ++||+++. . .|.+++++
T Consensus 236 ~~d~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 236 TAGKNS-EIWFTEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EECSTT-CEEEEETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEEC
T ss_pred EECCCC-CEEEeccCCCeEEEECCCCcEEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCCC
Confidence 999875 59999988899999999764332223335678999999974 67999987 5 88888764
No 31
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=2.5e-19 Score=178.31 Aligned_cols=263 Identities=12% Similarity=0.094 Sum_probs=183.4
Q ss_pred EEEEEeee-cccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-ee-------eecCCcEEEe---
Q psy14258 83 AIYFCTHY-MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF-------PMVTHKIVYP--- 150 (440)
Q Consensus 83 ~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-av-------D~~~~~lY~~--- 150 (440)
+.+|++|+ ..+.||+++...++|++++++...+..+.... ...+..|.+ |+ |..++.||++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~-------~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNIN-------TIPTNRIRSIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCT-------TSSCSBEEEEEECCCBTTTBCTTCEEEEEECC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccC-------ccccCCCcEEEEeecccccCCCCCEEEEEeCC
Confidence 99999998 58999999998788988887765544331100 124567999 99 9888889999
Q ss_pred c-e------EEEEecC--CceE-----EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC--------CCC-
Q psy14258 151 E-A------IYFCTHY--MEHC-----MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD--------GTE- 207 (440)
Q Consensus 151 ~-~------I~~~~~d--g~~~-----~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d--------G~~- 207 (440)
+ + |.+.+.+ |... ..+ . ...+|.++++||..|+||++++.. .+|++.+++ |..
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v-~-~~~~p~giavdp~~g~LYvtd~~~--g~V~r~d~~~~~~~~~tg~~~ 289 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLI-A-AYKQCNGATIHPINGELYFNSYEK--GQVFRLDLVDYFKTIKNGGSW 289 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEE-E-EESCCCCEEECTTTCCEEEEETTT--TEEEEECHHHHHHHHHTTCCC
T ss_pred CCCcccCceEEEEecCCCCceeecccceee-c-cCCCceEEEEcCCCCeEEEEECCC--CEEEEEecccccccccCceee
Confidence 2 2 6666433 3442 233 2 457999999999999999999986 589999997 332
Q ss_pred ----------ceeEEec-CccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc-----EEEec--C-----------C
Q psy14258 208 ----------RFPMVTH-KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR-----KTIRK--G-----------F 258 (440)
Q Consensus 208 ----------~~~l~~~-~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~-----~~i~~--~-----------~ 258 (440)
.+.+... ...+|.+|++|+.++.||++|...++|+++++++... .++.- + .
T Consensus 290 tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a 369 (496)
T 3kya_A 290 DPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEA 369 (496)
T ss_dssp CCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGC
T ss_pred cccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCccccc
Confidence 1233332 3468999999988888999999999999999998642 33322 1 1
Q ss_pred ccCcee-eeeEe--------cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecC
Q psy14258 259 PVQNLY-DITVF--------ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKG 329 (440)
Q Consensus 259 ~~~~p~-gl~~~--------~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~ 329 (440)
.+.+|. ++++. ++.||++|+.+++|+++++ +| ...++.+......+ . + ..+
T Consensus 370 ~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~--~-~-~~~-------------- 429 (496)
T 3kya_A 370 RMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSL--A-D-GNQ-------------- 429 (496)
T ss_dssp BCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHH--H-H-SCS--------------
T ss_pred ccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccc--c-C-ccc--------------
Confidence 367899 88886 4599999999999999985 45 33333322110000 0 0 000
Q ss_pred CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 330 KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 330 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
.+...........|..|.+|++|+.++.||++|...++|+++.+++.
T Consensus 430 ------------~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 430 ------------WGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ------------CCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred ------------cccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 00000001112357789999999987899999999999999999984
No 32
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.85 E-value=8e-19 Score=173.41 Aligned_cols=235 Identities=11% Similarity=0.042 Sum_probs=177.6
Q ss_pred ccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 205 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG 205 (440)
..+..|.+ |+|.. ++|||+ ++|.+.++++.....+... ...|. +++++..+.|||++.... .+|.+.+.++
T Consensus 128 a~~~~P~~la~d~~-g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~-~~I~~~d~~~ 203 (409)
T 3hrp_A 128 AKFKYMWGIAAVGN-NTVLAYQRDDPRVRLISVDDNKVTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGT-HTVYVYMKAS 203 (409)
T ss_dssp CCCCCEEEEEECST-TEEEEEETTTTEEEEEETTTTEEEEEEET-CCBCB-CEECTTSSEEEEEBSSTT-CEEEEEEGGG
T ss_pred cccCCceEEEEeCC-CCEEEEecCCCcEEEEECCCCEEEEeecc-CCCCc-eeEecCCCcEEEEecCCC-ceEEEEEcCC
Confidence 35789999 99965 559999 6899999998777766553 56688 999998889999998653 4899999987
Q ss_pred CCceeEE----ecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEE----ecCCccCcee-eeeEec--CEEE
Q psy14258 206 TERFPMV----THKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTI----RKGFPVQNLY-DITVFE--NNLF 274 (440)
Q Consensus 206 ~~~~~l~----~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i----~~~~~~~~p~-gl~~~~--~~ly 274 (440)
......+ ......|+++++|+.+++||+++. .++|.+++.++.....+ ..+.....|+ +|+++. +.||
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~ly 282 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFY 282 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEE
Confidence 6653333 224678999999988999999875 67999999987766555 2222223477 999985 5999
Q ss_pred EEecCCCeEEEEeccCCCceEEEec---------------CCCCeEEEEeccCCCCCCCCCceeEEeecC-CccEEEEEE
Q psy14258 275 VTSWRNQSIIRVNKFNSDDYETIAN---------------FSRPFAIHIYHRQKQPDALKPSTFLLYAKG-KPAIIKGLT 338 (440)
Q Consensus 275 ~td~~~~~i~~~~~~~g~~~~~~~~---------------~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~-~~~~I~~i~ 338 (440)
++|..+++|++++.. ++...+... +..|.++++. +++.||+++. .+++|++++
T Consensus 283 v~d~~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d----------~dG~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 283 MSDQNLSSVYKITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMTVD----------EDGNFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp EEETTTTEEEEECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC----------TTCCEEEEETTTTCEEEEEE
T ss_pred EEeCCCCEEEEEecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEe----------CCCCEEEEeCCCCCEEEEEE
Confidence 999999999999874 432222222 3457777766 4677999999 899999999
Q ss_pred cCCCCCCceeeeee---------------cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 339 FKRDGTTEQAIMPI---------------TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 339 ~~~~~~~~~~~~~~---------------~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+... .+.... ..+..|.+|++|+. +.||++|...++|+|+.++
T Consensus 352 ~~~G----~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~-g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 352 ILDG----YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGE-GGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTTT----EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSS-SEEEEEESTTCEEEEEEEC
T ss_pred CCCC----EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCC-CCEEEEECCCCeEEEEEeC
Confidence 5332 111111 12568999999997 8899999999999998763
No 33
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.84 E-value=3.2e-19 Score=165.20 Aligned_cols=237 Identities=16% Similarity=0.184 Sum_probs=176.3
Q ss_pred CceEEEEcCCCCeEEE-EEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc
Q psy14258 173 KPRGIALDPTSGYMFF-TKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR 251 (440)
Q Consensus 173 ~P~~iavd~~~g~lyw-td~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~ 251 (440)
.|.+|++|+ .|.||+ ++... .+|.+.+.++.....+.......|.+|++|+ .++||+++. .+.|.+++.+|...
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMY--GRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSS--CEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCC
T ss_pred CccceEECC-CCCEEEEccCCC--CcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceE
Confidence 999999999 578999 87654 5899998876554433333456899999995 567999998 78999999988766
Q ss_pred EEEecCCccCceeeeeEec-CEEEEEecCCCeEEEEeccCCCceEEE-ecCCCCeEEEEeccCCCCCCCCCceeEEeecC
Q psy14258 252 KTIRKGFPVQNLYDITVFE-NNLFVTSWRNQSIIRVNKFNSDDYETI-ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKG 329 (440)
Q Consensus 252 ~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~~-~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~ 329 (440)
..+... .+..|.+|+++. +.||+++..++.|.+++..+....... .....|.++.+. +++.|++++.
T Consensus 100 ~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~----------~~g~l~v~~~ 168 (270)
T 1rwi_B 100 TVLPFD-GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVD----------NSGNVYVTDT 168 (270)
T ss_dssp EECCCC-SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEEC----------TTCCEEEEEG
T ss_pred eeeecC-CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEe----------CCCCEEEEEC
Confidence 554332 257899999985 489999998899999965333222211 233467777766 4566899887
Q ss_pred CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecC
Q psy14258 330 KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWM 409 (440)
Q Consensus 330 ~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~ 409 (440)
..+.|.+++.++. . ........+..|.+|++|+.+ .+|+++...+.|+++++++.........++..|.+|++|..
T Consensus 169 ~~~~i~~~~~~~~-~--~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 169 DNNRVVKLEAESN-N--QVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp GGTEEEEECTTTC-C--EEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTT
T ss_pred CCCEEEEEecCCC-c--eEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCC
Confidence 6689999998766 1 112233445789999999875 79999999999999999986554443345678999999975
Q ss_pred CCcEEEEeCCCCeEEEEEeCC
Q psy14258 410 ANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 410 ~~~lYwtd~~~~~I~~~~~~g 430 (440)
+ +||+++.+.++|.+++++.
T Consensus 245 g-~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 245 R-TVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp C-CEEEEEGGGTEEEEECCCG
T ss_pred C-CEEEEECCCCEEEEEcCCC
Confidence 5 7999999999999999886
No 34
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=2.4e-17 Score=154.38 Aligned_cols=274 Identities=17% Similarity=0.126 Sum_probs=198.4
Q ss_pred ccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 205 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG 205 (440)
.....|.+ ++|..+ +||++ +.|.+.+.+|.............|.+|++|+ +|.||+++... ++|.+.+.+|
T Consensus 12 ~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~i~~~~~~g 87 (299)
T 2z2n_A 12 NQDTGPYGITVSDKG-KVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISS-DGEVWFTENAA--NKIGRITKKG 87 (299)
T ss_dssp SSSCCEEEEEECTTS-CEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECT-TSCEEEEETTT--TEEEEECTTS
T ss_pred CcCCCccceEECCCC-CEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECC-CCCEEEeCCCC--CeEEEECCCC
Confidence 34568999 999765 58888 5799999986554433333457899999998 68999998764 5899999986
Q ss_pred CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEE
Q psy14258 206 TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSII 284 (440)
Q Consensus 206 ~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~ 284 (440)
.............|.+|++| ..++||+++...+.|.+++.+|......... ....|.+++++.+ .+|+++...+.|+
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEG-PNGDIWFTEMNGNRIGRITDDGKIREYELPN-KGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECTTCCEEEEECSS-TTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cEEEEeCCCcCCCceeeEEC-CCCCEEEEecCCceEEEECCCCCEEEecCCC-CCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 53322222245689999999 4679999998888999999866543332222 2568999999854 9999998889999
Q ss_pred EEeccCCCceEEE-e-cCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEE
Q psy14258 285 RVNKFNSDDYETI-A-NFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVI 361 (440)
Q Consensus 285 ~~~~~~g~~~~~~-~-~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l 361 (440)
+++. +++..... . ....|.++.+. +++.|++++...+.|.+++.++. . ...... ....|.++
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~----------~~g~l~v~~~~~~~i~~~~~~g~--~--~~~~~~~~~~~~~~i 230 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKG----------NDDALWFVEIIGNKIGRITTSGE--I--TEFKIPTPNARPHAI 230 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEEC----------TTSSEEEEETTTTEEEEECTTCC--E--EEEECSSTTCCEEEE
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEEC----------CCCCEEEEccCCceEEEECCCCc--E--EEEECCCCCCCceeE
Confidence 9998 66544432 2 23457777665 35668888866689999988433 1 122222 35679999
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecCCCCeEEE-EECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMFGRGKEVV-IDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~-~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++|+.+ .+|+++...+.|.+++++|. ...+ ...+...|.+|++ ..++||+++. .+.|.+++++.
T Consensus 231 ~~~~~g-~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~~~~~~~i~~--~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 231 TAGAGI-DLWFTEWGANKIGRLTSNNI-IEEYPIQIKSAEPHGICF--DGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp EECSTT-CEEEEETTTTEEEEEETTTE-EEEEECSSSSCCEEEEEE--CSSCEEEEET-TTEEEEEEEC-
T ss_pred EECCCC-CEEEeccCCceEEEECCCCc-eEEEeCCCCCCccceEEe--cCCCEEEEec-CCcEEEEEcCc
Confidence 999874 59999988899999999763 2232 2344578999999 4778999986 57899998875
No 35
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=2.3e-18 Score=165.08 Aligned_cols=247 Identities=10% Similarity=0.041 Sum_probs=169.1
Q ss_pred cccceEEEEEeeecccEEEEEEcCCCC------------------------ceeEEeCCCCCcceeeccccccceeeccc
Q psy14258 78 TFAQEAIYFCTHYMEHCMIAIDLNLSK------------------------PRGIALDPTSGYMFFTKWGATRPMLERSL 133 (440)
Q Consensus 78 ~~~~~~~~i~~d~~~~~ly~~d~~~~~------------------------I~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 133 (440)
+.. +.+|++|+. +++|+++...++ |++.+.+...+.. ..-...+
T Consensus 23 l~~--v~~va~d~~-G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~---------~~~~~~~ 90 (329)
T 3fvz_A 23 PGQ--VSGVALDSK-NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ---------SSGKNLF 90 (329)
T ss_dssp CSC--EEEEEECTT-CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE---------EECTTTC
T ss_pred cCC--ceEEEECCC-CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe---------ccCCCcc
Confidence 445 999999986 789999988743 4443332111100 0011345
Q ss_pred cccce-eeeecCCcEEEe----ceEEEEecCCc--eEEEEE--------cCCCCCceEEEEcCCCCeEEEEEc-CCCCCc
Q psy14258 134 LDGTE-RFPMVTHKIVYP----EAIYFCTHYME--HCMIAI--------DLNLSKPRGIALDPTSGYMFFTKW-GATRPM 197 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~----~~I~~~~~dg~--~~~~~~--------~~~~~~P~~iavd~~~g~lywtd~-~~~~~~ 197 (440)
..|.+ |+|+.++ ||++ ++|.+.+++|. ....+. ...+..|.+|++||.+|.||++|. .. .+
T Consensus 91 ~~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~--~~ 167 (329)
T 3fvz_A 91 YLPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN--SR 167 (329)
T ss_dssp SSEEEEEECTTSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC--CE
T ss_pred CCceEEEECCCCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC--Ce
Confidence 68999 9997655 9999 78999999997 344443 234668999999998899999996 54 69
Q ss_pred EEEEeCCCCCceeEEe---------cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEecCCccCceeeee
Q psy14258 198 LERSLLDGTERFPMVT---------HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRKGFPVQNLYDIT 267 (440)
Q Consensus 198 I~r~~~dG~~~~~l~~---------~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~~~~~~~p~gl~ 267 (440)
|.+.+.+|.....+.. ..+..|.||++|+.+++||++|...++|.+++.+ |.....+........|++++
T Consensus 168 I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 168 IVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 9999999987665542 1356799999998889999999999999999998 77666664332235677777
Q ss_pred EecCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCce
Q psy14258 268 VFENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQ 347 (440)
Q Consensus 268 ~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~ 347 (440)
+..+.+|.++.. +++++....+|+.+++... .
T Consensus 248 ~~pg~~~~~~g~--------------------------------------------~~v~~~~~~~v~~~~~~~g----~ 279 (329)
T 3fvz_A 248 YIPGFLFAVNGK--------------------------------------------PYFGDQEPVQGFVMNFSSG----E 279 (329)
T ss_dssp EETTEEEEEECC--------------------------------------------CCTTCSCCCCEEEEETTTC----C
T ss_pred ecCCEEEEeCCC--------------------------------------------EEeccCCCcEEEEEEcCCC----e
Confidence 766555555421 1111111223333332211 0
Q ss_pred eeee----ecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 348 AIMP----ITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 348 ~~~~----~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
.... ...+..|.+|++|+.+ .||++|...++|.+++++|.
T Consensus 280 ~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 280 IIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEEEEEEEC
T ss_pred EEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEEEeCCcc
Confidence 1111 1245679999999975 89999999999999998874
No 36
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.81 E-value=5.3e-17 Score=152.10 Aligned_cols=269 Identities=14% Similarity=0.079 Sum_probs=194.6
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEe
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCT 157 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~ 157 (440)
|.+|++|+. ++||+++...+.|.+++.+ .....+ .+......|.+ ++|.. ++||++ ++|.+.+
T Consensus 22 p~~i~~d~~-g~l~v~~~~~~~v~~~~~~-~~~~~~---------~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~v~~~d 89 (300)
T 2qc5_A 22 PYGITSSED-GKVWFTQHKANKISSLDQS-GRIKEF---------EVPTPDAKVMCLIVSSL-GDIWFTENGANKIGKLS 89 (300)
T ss_dssp EEEEEECTT-SCEEEEETTTTEEEEECTT-SCEEEE---------ECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEEC
T ss_pred cceeeECCC-CCEEEEcCCCCeEEEECCC-CceEEE---------ECCCCCCcceeEEECCC-CCEEEEecCCCeEEEEC
Confidence 999999976 7799999887888877655 222111 12234568999 99954 569988 6799999
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
.+|+............|.+|++|+ .|.||+++... ..|.+.+.+|.............|.+|++|+ .++||+++..
T Consensus 90 ~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~ 165 (300)
T 2qc5_A 90 KKGGFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNG--DRIGKLTADGTIYEYDLPNKGSYPAFITLGS-DNALWFTENQ 165 (300)
T ss_dssp TTSCEEEEECSSTTCCEEEEEECS-TTCEEEEETTT--TEEEEECTTSCEEEEECSSTTCCEEEEEECT-TSSEEEEETT
T ss_pred CCCCeEEecCCCCCCCCccceECC-CCCEEEEccCC--CeEEEECCCCCEEEccCCCCCCCceeEEECC-CCCEEEEecC
Confidence 997664433333457899999998 68999999765 5899999986544322233467899999995 5569999988
Q ss_pred CCcEEEEEccCCCcEEEecCCccCceeeeeEec-CEEEEEecCCCeEEEEeccCCCceEEEe--cCCCCeEEEEeccCCC
Q psy14258 238 LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE-NNLFVTSWRNQSIIRVNKFNSDDYETIA--NFSRPFAIHIYHRQKQ 314 (440)
Q Consensus 238 ~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~~~--~~~~p~~~~v~~~~~q 314 (440)
.+.|.+++.+|.... +........|.+++++. +.||+++...+.|.+++. +++...... ....|.++.+.
T Consensus 166 ~~~i~~~~~~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d----- 238 (300)
T 2qc5_A 166 NNSIGRITNTGKLEE-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAG----- 238 (300)
T ss_dssp TTEEEEECTTCCEEE-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC-----
T ss_pred CCeEEEECCCCcEEE-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEEC-----
Confidence 889999998765443 32222367899999985 499999998889999998 555444322 34467787766
Q ss_pred CCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 315 PDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 315 p~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+++.|++++...+.|.+++.++. -....+. ....|.++++|+. +.||+++. . .|.+++++
T Consensus 239 -----~~g~l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~-g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 239 -----KNSEIWFTEWGANQIGRITNDNT----IQEYQLQTENAEPHGITFGKD-GSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -----STTCEEEEETTTTEEEEECTTSC----EEEEECCSTTCCCCCEEECTT-SCEEEECS-S-EEEEEEEC
T ss_pred -----CCCCEEEeccCCCeEEEECCCCc----EEEEECCccCCccceeEeCCC-CCEEEEcc-C-ceEEeCCC
Confidence 35669999876689999988544 1222222 3567999999986 55999987 5 99998764
No 37
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.80 E-value=3.3e-17 Score=156.44 Aligned_cols=245 Identities=14% Similarity=0.168 Sum_probs=178.0
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec-------------------CccCceEEEEeCCC
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH-------------------KIVYPYGVTVDFPT 228 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~-------------------~~~~P~gl~vD~~~ 228 (440)
...+..|++|++|+ .|.++|++... ++|.+.+.++...+.+... ....|.||++|+.+
T Consensus 15 ~g~~~~p~~i~~d~-~g~~l~v~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~ 91 (322)
T 2fp8_A 15 EAPSYAPNSFTFDS-TNKGFYTSVQD--GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQN 91 (322)
T ss_dssp ECSSSCCCCEECCT-TCSSEEEECTT--SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTT
T ss_pred CCccCCceEEEEcC-CCCEEEEEcCC--CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCC
Confidence 34578999999999 48888888665 6999999887654444321 13479999999668
Q ss_pred CEEEEEeCCCCcEEEEEccCCCcEEEec---CCccCceeeeeEec--CEEEEEecC-----------------CCeEEEE
Q psy14258 229 KHVYWVDTYLDFIDRINYDGTDRKTIRK---GFPVQNLYDITVFE--NNLFVTSWR-----------------NQSIIRV 286 (440)
Q Consensus 229 ~~ly~~d~~~~~i~~~~~dG~~~~~i~~---~~~~~~p~gl~~~~--~~ly~td~~-----------------~~~i~~~ 286 (440)
++||++|... .|.+++.++...+.+.. +..+..|.+++++. +.||++|.. .+.|+++
T Consensus 92 g~l~v~d~~~-~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~ 170 (322)
T 2fp8_A 92 NQLYIVDCYY-HLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKY 170 (322)
T ss_dssp TEEEEEETTT-EEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEE
T ss_pred CcEEEEECCC-CEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEE
Confidence 8999999764 48888887655555543 22356799999986 499999975 2678998
Q ss_pred eccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCc-eeeeeecCCCCceEEEEE
Q psy14258 287 NKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTE-QAIMPITDLKRPSVIDYH 364 (440)
Q Consensus 287 ~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~-~~~~~~~~~~~p~~l~~d 364 (440)
+..+++...+...+..|.++++. ++ .+||+++...++|+++++++..... ....... .|.++++|
T Consensus 171 d~~~~~~~~~~~~~~~p~gia~~----------~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---gP~gi~~d 237 (322)
T 2fp8_A 171 DPSTKETTLLLKELHVPGGAEVS----------ADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---NPGNIKRN 237 (322)
T ss_dssp ETTTTEEEEEEEEESCCCEEEEC----------TTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---SEEEEEEC
T ss_pred eCCCCEEEEeccCCccCcceEEC----------CCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---CCCCeEEC
Confidence 87666544455566778888776 34 5799999877899999998641111 1111222 29999999
Q ss_pred cCCCEEEEEECC----------CCeEEEEecCCCCeEEEEECC---CCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCC
Q psy14258 365 EKEEYIYYAELT----------SYVIERRKMFGRGKEVVIDTG---IYNVEGMAVDWMANNLYWTDAGIGTINVAKISDF 431 (440)
Q Consensus 365 ~~~~~vy~~d~~----------~~~I~r~~~~g~~~~~~~~~~---~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~ 431 (440)
+.+ .||+++.. .+.|.+++.+|...+.+...+ +..|.+++.+ +++||+++...++|.+++++.+
T Consensus 238 ~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 238 ADG-HFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp TTS-CEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEEC---
T ss_pred CCC-CEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEecccc
Confidence 965 59999866 578999999986555544322 5678999886 7899999999999999999874
Q ss_pred e
Q psy14258 432 S 432 (440)
Q Consensus 432 ~ 432 (440)
.
T Consensus 315 ~ 315 (322)
T 2fp8_A 315 G 315 (322)
T ss_dssp -
T ss_pred c
Confidence 3
No 38
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.80 E-value=1.3e-16 Score=149.07 Aligned_cols=241 Identities=11% Similarity=0.029 Sum_probs=178.7
Q ss_pred ccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEc-----CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEE
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAID-----LNLSKPRGIALDPTSGYMFFTKWGATRPMLER 200 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~-----~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r 200 (440)
..+..|.+ |+|..+ +||++ ++|.+.+.+|.....+.. ..+..|.+|++++..|.||+++.... .+|.+
T Consensus 27 g~~~~p~~v~~~~~g-~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~-~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQN-DIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPT-HQIQI 104 (286)
T ss_dssp TCBSCEEEEEECTTC-CEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGG-CEEEE
T ss_pred CccCCCceEEECCCC-CEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCC-CEEEE
Confidence 35678999 999765 59998 689999999876655532 13468999999756899999996422 58999
Q ss_pred EeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecC
Q psy14258 201 SLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWR 279 (440)
Q Consensus 201 ~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~ 279 (440)
.+.+|.....+.......|.+|++|+ .++||+++...+.|..++.+|.....+.....+..|.+|+++.+ .+|+++..
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred ECCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 99888765544333456899999995 56799999988999999988876665543223678999999864 89999988
Q ss_pred CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCce
Q psy14258 280 NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPS 359 (440)
Q Consensus 280 ~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~ 359 (440)
++.|.+++.. ++. +..+...+ .+..|.
T Consensus 184 ~~~i~~~~~~-g~~----------------------------------------~~~~~~~g------------~~~~p~ 210 (286)
T 1q7f_A 184 AHCVKVFNYE-GQY----------------------------------------LRQIGGEG------------ITNYPI 210 (286)
T ss_dssp GTEEEEEETT-CCE----------------------------------------EEEESCTT------------TSCSEE
T ss_pred CCEEEEEcCC-CCE----------------------------------------EEEEccCC------------ccCCCc
Confidence 8888877752 211 11110000 134689
Q ss_pred EEEEEcCCCEEEEEECCCC-eEEEEecCCCCeEEEEE-CCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 360 VIDYHEKEEYIYYAELTSY-VIERRKMFGRGKEVVID-TGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 360 ~l~~d~~~~~vy~~d~~~~-~I~r~~~~g~~~~~~~~-~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+|++|+. +.+|+++...+ .|.+.+.+|.....+.. .....|.+||+|+ .++||+++. .++|.++++..
T Consensus 211 ~i~~d~~-G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~-~g~l~vs~~-~~~v~v~~~~~ 280 (286)
T 1q7f_A 211 GVGINSN-GEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMD-DGSVVLASK-DYRLYIYRYVQ 280 (286)
T ss_dssp EEEECTT-CCEEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEET-TTEEEEEET-TTEEEEEECSC
T ss_pred EEEECCC-CCEEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECC-CCcEEEECC-CCeEEEEEccc
Confidence 9999986 46999998886 99999998865555543 2234689999997 457999975 68999999864
No 39
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.79 E-value=8.1e-17 Score=154.24 Aligned_cols=243 Identities=9% Similarity=0.066 Sum_probs=177.8
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC-CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG-TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTD 250 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG-~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~ 250 (440)
..|++|+++. ++||++.... ..|.+.+... .....+ .....|.+|++++. ++||+++...+.|..++.....
T Consensus 44 ~~~~~i~~~~--~~lyv~~~~~--~~v~viD~~t~~~~~~i--~~~~~p~~i~~~~~-g~lyv~~~~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 44 DVAQSMVIRD--GIGWIVVNNS--HVIFAIDINTFKEVGRI--TGFTSPRYIHFLSD-EKAYVTQIWDYRIFIINPKTYE 116 (328)
T ss_dssp SCEEEEEEET--TEEEEEEGGG--TEEEEEETTTCCEEEEE--ECCSSEEEEEEEET-TEEEEEEBSCSEEEEEETTTTE
T ss_pred ccceEEEEEC--CEEEEEEcCC--CEEEEEECcccEEEEEc--CCCCCCcEEEEeCC-CeEEEEECCCCeEEEEECCCCe
Confidence 4689999975 8999999865 5899999873 332333 24578999999744 5999999778899999986544
Q ss_pred cE-EEecCC---ccCceeeeeEecCEEEEEecC-CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEE
Q psy14258 251 RK-TIRKGF---PVQNLYDITVFENNLFVTSWR-NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLL 325 (440)
Q Consensus 251 ~~-~i~~~~---~~~~p~gl~~~~~~ly~td~~-~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~ 325 (440)
.. .+..+. ....|.+|++.++.||++++. .+.|..++..+++....+.....|.++.+. +++.++
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~----------~dG~l~ 186 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMD----------KYNKMW 186 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEEC----------TTSEEE
T ss_pred EEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEc----------CCCCEE
Confidence 33 333221 123799999988899999994 889999999888766655544567777665 456677
Q ss_pred eecCCc----------cEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeE--EE
Q psy14258 326 YAKGKP----------AIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKE--VV 393 (440)
Q Consensus 326 ~~~~~~----------~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~--~~ 393 (440)
++.... +.|.+++.+.. .. ...+.+.....|.++++++.++.+|+++. .|+++++...... .+
T Consensus 187 v~~~~~~~~~~~~~~~~~v~~id~~t~-~v-~~~~~~~~g~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~~~ 261 (328)
T 3dsm_A 187 TITDGGYEGSPYGYEAPSLYRIDAETF-TV-EKQFKFKLGDWPSEVQLNGTRDTLYWINN---DIWRMPVEADRVPVRPF 261 (328)
T ss_dssp EEBCCBCTTCSSCBCCCEEEEEETTTT-EE-EEEEECCTTCCCEEEEECTTSCEEEEESS---SEEEEETTCSSCCSSCS
T ss_pred EEECCCccCCccccCCceEEEEECCCC-eE-EEEEecCCCCCceeEEEecCCCEEEEEcc---EEEEEECCCCceeeeee
Confidence 776643 68999997655 11 11233332347999999999999999975 8999998753321 12
Q ss_pred EECCCCCeeeEEEecCCCcEEEEe----CCCCeEEEEEeCCCeeeEEe
Q psy14258 394 IDTGIYNVEGMAVDWMANNLYWTD----AGIGTINVAKISDFSIRKVL 437 (440)
Q Consensus 394 ~~~~~~~~~glAvD~~~~~lYwtd----~~~~~I~~~~~~g~~~~~~l 437 (440)
+..+...|.|||+|+.+++||+++ ...++|.+++++| +..+.+
T Consensus 262 ~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g-~~~~~i 308 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQG-KLIDEF 308 (328)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTC-CEEEEE
T ss_pred ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCC-CEEEEE
Confidence 222246899999999899999999 7889999999999 444444
No 40
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.79 E-value=1.9e-17 Score=153.22 Aligned_cols=233 Identities=13% Similarity=0.193 Sum_probs=171.6
Q ss_pred ccce-eeeecCCcEEE-e----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 135 DGTE-RFPMVTHKIVY-P----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~-~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
.|.+ ++|..+ +||+ + ++|.+.+.++.....+....+..|.+|++|+ .|.||+++. . .+|.+.+.+|...
T Consensus 25 ~p~~i~~~~~g-~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~--~~i~~~d~~~~~~ 99 (270)
T 1rwi_B 25 SPSGVAVDSAG-NVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-N--NRVVTLAAGSNNQ 99 (270)
T ss_dssp CEEEEEECTTC-CEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-T--TEEEEECTTCSCC
T ss_pred CccceEECCCC-CEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-C--CEEEEEeCCCceE
Confidence 8999 999865 5999 6 6899988876654443334567899999999 588999997 3 6999999998766
Q ss_pred eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec-CEEEEEecCCCeEEEEe
Q psy14258 209 FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE-NNLFVTSWRNQSIIRVN 287 (440)
Q Consensus 209 ~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~~i~~~~ 287 (440)
..+.......|.+|++|+ .++||+++...+.|.+++... ..........+..|.+|+++. +.||+++..++.|.+++
T Consensus 100 ~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 177 (270)
T 1rwi_B 100 TVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGS-KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLE 177 (270)
T ss_dssp EECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTC-CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEEC
T ss_pred eeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCC-ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEe
Confidence 544334567899999995 667999998888999996433 333322222256899999985 48999999889999999
Q ss_pred ccCCCceEEE-ecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcC
Q psy14258 288 KFNSDDYETI-ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEK 366 (440)
Q Consensus 288 ~~~g~~~~~~-~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~ 366 (440)
..++...... ..+..|.++.+. +++.|++++...+.|.+++.++. .. ...+..++..|.++++|+.
T Consensus 178 ~~~~~~~~~~~~~~~~p~~i~~d----------~~g~l~v~~~~~~~v~~~~~~~~-~~--~~~~~~~~~~p~~i~~~~~ 244 (270)
T 1rwi_B 178 AESNNQVVLPFTDITAPWGIAVD----------EAGTVYVTEHNTNQVVKLLAGST-TS--TVLPFTGLNTPLAVAVDSD 244 (270)
T ss_dssp TTTCCEEECCCSSCCSEEEEEEC----------TTCCEEEEETTTSCEEEECTTCS-CC--EECCCCSCSCEEEEEECTT
T ss_pred cCCCceEeecccCCCCceEEEEC----------CCCCEEEEECCCCcEEEEcCCCC-cc--eeeccCCCCCceeEEECCC
Confidence 7654433322 234568888776 45689999877789999988765 21 1233345678999999987
Q ss_pred CCEEEEEECCCCeEEEEecCCC
Q psy14258 367 EEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 367 ~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
+ .+|+++...++|.+++++..
T Consensus 245 g-~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 245 R-TVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp C-CEEEEEGGGTEEEEECCCGG
T ss_pred C-CEEEEECCCCEEEEEcCCCc
Confidence 6 59999999999999988753
No 41
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.77 E-value=1.5e-15 Score=141.98 Aligned_cols=247 Identities=19% Similarity=0.192 Sum_probs=177.9
Q ss_pred EcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEc
Q psy14258 167 IDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINY 246 (440)
Q Consensus 167 ~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~ 246 (440)
+......|.+|++|+ .|.||+++... +.|.+.+.+|.............|.+|++| ..++||+++...+.|.+++.
T Consensus 10 ~~~~~~~~~~i~~d~-~g~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD-KGKVWITQHKA--NMISCINLDGKITEYPLPTPDAKVMCLTIS-SDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECT-TSCEEEEETTT--TEEEEECTTCCEEEEECSSTTCCEEEEEEC-TTSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCccceEECC-CCCEEEEecCC--CcEEEEcCCCCeEEecCCcccCceeeEEEC-CCCCEEEeCCCCCeEEEECC
Confidence 334567899999998 68999998754 589999998443222222235679999999 56789999988889999998
Q ss_pred cCCCcEEEecCCccCceeeeeEec-CEEEEEecCCCeEEEEeccCCCceEEEe--cCCCCeEEEEeccCCCCCCCCCcee
Q psy14258 247 DGTDRKTIRKGFPVQNLYDITVFE-NNLFVTSWRNQSIIRVNKFNSDDYETIA--NFSRPFAIHIYHRQKQPDALKPSTF 323 (440)
Q Consensus 247 dG~~~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~~~--~~~~p~~~~v~~~~~qp~~~~~~~~ 323 (440)
+|.. +.+........|.+++++. +.||+++...+.|.+++. +++...... ....|.++.+. +++.
T Consensus 86 ~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~----------~~g~ 153 (299)
T 2z2n_A 86 KGII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLG----------SDNA 153 (299)
T ss_dssp TSCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEEC----------TTSC
T ss_pred CCcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEc----------CCCC
Confidence 8653 3332221256899999985 599999988889999998 565444322 23357777665 4567
Q ss_pred EEeecCCccEEEEEEcCCCCCCceeeeee-cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCee
Q psy14258 324 LLYAKGKPAIIKGLTFKRDGTTEQAIMPI-TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVE 402 (440)
Q Consensus 324 l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~ 402 (440)
|++++...+.|.+++.++. -..... .....|.++++|+.+ .+|+++...+.|++++++|.............|.
T Consensus 154 l~v~~~~~~~i~~~~~~g~----~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~ 228 (299)
T 2z2n_A 154 LWFTENQNNAIGRITESGD----ITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITTSGEITEFKIPTPNARPH 228 (299)
T ss_dssp EEEEETTTTEEEEECTTCC----EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE
T ss_pred EEEEeCCCCEEEEEcCCCc----EEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECCCCcEEEEECCCCCCCce
Confidence 8888766688999988433 112222 235679999999874 5999998899999999965422221223457899
Q ss_pred eEEEecCCCcEEEEeCCCCeEEEEEeCCCeeeEE
Q psy14258 403 GMAVDWMANNLYWTDAGIGTINVAKISDFSIRKV 436 (440)
Q Consensus 403 glAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~~ 436 (440)
+|++|.. ++||+++...+.|.+++++| +.+..
T Consensus 229 ~i~~~~~-g~l~v~~~~~~~i~~~d~~g-~~~~~ 260 (299)
T 2z2n_A 229 AITAGAG-IDLWFTEWGANKIGRLTSNN-IIEEY 260 (299)
T ss_dssp EEEECST-TCEEEEETTTTEEEEEETTT-EEEEE
T ss_pred eEEECCC-CCEEEeccCCceEEEECCCC-ceEEE
Confidence 9999975 57999998889999999987 54443
No 42
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.75 E-value=5.3e-16 Score=147.02 Aligned_cols=229 Identities=11% Similarity=0.063 Sum_probs=161.6
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCC--cEEEEEccCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLD--FIDRINYDGT 249 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~--~i~~~~~dG~ 249 (440)
..|.++++|+ +|.|||+|... ++|.+.+.+|.... .... ...|.||++|+ .++||++|...+ .|.+++....
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~--~~I~~~d~~g~~~~-~~~~-~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEV--GEIVSITPDGNQQI-HATV-EGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTT--TEEEEECTTCCEEE-EEEC-SSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTS
T ss_pred CCcceEEECC-CCCEEEEeCCC--CeEEEECCCCceEE-EEeC-CCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCC
Confidence 5799999999 68899999775 59999999985432 3332 35799999995 466999996644 4888775444
Q ss_pred CcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEE-E----------ecCCCCeEEEEeccCCCCCC
Q psy14258 250 DRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYET-I----------ANFSRPFAIHIYHRQKQPDA 317 (440)
Q Consensus 250 ~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~-~----------~~~~~p~~~~v~~~~~qp~~ 317 (440)
..+.+........|.|+++..+ .+|++|..++.|++++..+++.... . ..+..|.++ .
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s-------- 175 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K-------- 175 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E--------
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C--------
Confidence 4555443222566888886544 8999999899999999765421111 1 122245555 1
Q ss_pred CCC-ceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEE-EE
Q psy14258 318 LKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVV-ID 395 (440)
Q Consensus 318 ~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~-~~ 395 (440)
+ +.+||+++...++|.++++++.+...... .+..+..|.+|++|+.+ .+|+++...++|.+++.+|....+. +.
T Consensus 176 --~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~-~~~~~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~~~~~~~~~ 251 (306)
T 2p4o_A 176 --RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPE-IFVEQTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRSTTIIAQAE 251 (306)
T ss_dssp --EETTEEEEEETTTTEEEEEEBCTTSCBCCCE-EEEESCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCCEEEEECGG
T ss_pred --cCCCEEEEEeCCCCEEEEEEeCCCCCCCccE-EEeccCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCCEEEEeecc
Confidence 2 36899999988999999998632221111 12224579999999865 6999999999999999987432221 22
Q ss_pred CCCCCeeeEEEe---cCCCcEEEEeCCC
Q psy14258 396 TGIYNVEGMAVD---WMANNLYWTDAGI 420 (440)
Q Consensus 396 ~~~~~~~glAvD---~~~~~lYwtd~~~ 420 (440)
.++..|.++|++ ..++.||+++...
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cccCCceEEEEecccCCCCEEEEECCCC
Confidence 356789999998 6789999998753
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=2.4e-15 Score=140.49 Aligned_cols=237 Identities=12% Similarity=0.136 Sum_probs=174.5
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe-----ceEEEE
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP-----EAIYFC 156 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~-----~~I~~~ 156 (440)
|.++++++. +.||+++...++|.+.+.++.....+..... ....+..|.+ |++...++||++ +.|.+.
T Consensus 32 p~~v~~~~~-g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~-----~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 32 PSGVAVNAQ-NDIIVADTNNHRIQIFDKEGRFKFQFGECGK-----RDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp EEEEEECTT-CCEEEEEGGGTEEEEECTTSCEEEEECCBSS-----STTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CceEEECCC-CCEEEEECCCCEEEEECCCCcEEEEecccCC-----CcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 999999976 6799999988888887766443222210000 0123567999 997677889998 479999
Q ss_pred ecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe-cCccCceEEEEeCCCCEEEEEe
Q psy14258 157 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT-HKIVYPYGVTVDFPTKHVYWVD 235 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~-~~~~~P~gl~vD~~~~~ly~~d 235 (440)
+.+|.....+.......|.+|++|+ .|.||+++... .+|.+.+.+|.....+.. ..+..|.+|++|+ .++||+++
T Consensus 106 d~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~--~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~ 181 (286)
T 1q7f_A 106 NQYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKV--MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVND-KQEIFISD 181 (286)
T ss_dssp CTTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTT--TEEEEECTTSCEEEEEECTTTCSSEEEEEECS-SSEEEEEE
T ss_pred CCCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCC--CEEEEEcCCCCEEEEeCCCCccCCcEEEEECC-CCCEEEEE
Confidence 9888877666444567899999999 68899999775 589999998875554432 2456899999995 57899999
Q ss_pred CCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCC-eEEEEeccCCCceEEEe-cC--CCCeEEEEec
Q psy14258 236 TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQ-SIIRVNKFNSDDYETIA-NF--SRPFAIHIYH 310 (440)
Q Consensus 236 ~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~-~i~~~~~~~g~~~~~~~-~~--~~p~~~~v~~ 310 (440)
...+.|..++.+|.....+.....+..|.+|+++.+ +||+++..++ .|.+++. +|+....+. .. ..|.++.+.
T Consensus 182 ~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~- 259 (286)
T 1q7f_A 182 NRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM- 259 (286)
T ss_dssp GGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE-
T ss_pred CCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC-
Confidence 988999999998876655543222578999999865 9999999886 9999986 455544433 22 247778776
Q ss_pred cCCCCCCCCCceeEEeecCCccEEEEEEcCC
Q psy14258 311 RQKQPDALKPSTFLLYAKGKPAIIKGLTFKR 341 (440)
Q Consensus 311 ~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~ 341 (440)
+++.|++++. .++|+.+.+..
T Consensus 260 ---------~~g~l~vs~~-~~~v~v~~~~~ 280 (286)
T 1q7f_A 260 ---------DDGSVVLASK-DYRLYIYRYVQ 280 (286)
T ss_dssp ---------TTTEEEEEET-TTEEEEEECSC
T ss_pred ---------CCCcEEEECC-CCeEEEEEccc
Confidence 4667888864 57888777644
No 44
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.73 E-value=7.9e-15 Score=138.89 Aligned_cols=224 Identities=13% Similarity=0.058 Sum_probs=162.5
Q ss_pred cccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 134 LDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
..|++ |+|.. ++|||+ ++|.+.+.+|.....+ . .-..|.+|++|+ .|.||+++.+.+..+|.+.+......
T Consensus 32 ~~pegia~~~~-g~lyv~d~~~~~I~~~d~~g~~~~~~-~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPD-GTIFVTNHEVGEIVSITPDGNQQIHA-T-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTT-SCEEEEETTTTEEEEECTTCCEEEEE-E-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCC-CCEEEEeCCCCeEEEECCCCceEEEE-e-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeE
Confidence 68999 99984 569999 7999999999754433 2 235799999999 57899999765313588877543333
Q ss_pred eeEEe-cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEe--------c-CCccCceeeeeEecCEEEEEec
Q psy14258 209 FPMVT-HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIR--------K-GFPVQNLYDITVFENNLFVTSW 278 (440)
Q Consensus 209 ~~l~~-~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~--------~-~~~~~~p~gl~~~~~~ly~td~ 278 (440)
+.+.. .....|+|++++ .++++|++|...+.|++++.++...++.. . ...+..|.||+.++++||+++.
T Consensus 108 ~~~~~~~~~~~~~g~~~~-~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~ 186 (306)
T 2p4o_A 108 ETLLTLPDAIFLNGITPL-SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT 186 (306)
T ss_dssp EEEEECTTCSCEEEEEES-SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET
T ss_pred EEEEeCCCccccCccccc-CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC
Confidence 33433 235678999986 67899999988899999998754322221 0 1135689999777889999999
Q ss_pred CCCeEEEEeccC-CC--ceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeee-ee-c
Q psy14258 279 RNQSIIRVNKFN-SD--DYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIM-PI-T 353 (440)
Q Consensus 279 ~~~~i~~~~~~~-g~--~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~-~~-~ 353 (440)
.+++|++++... |+ ...++..+..|.++++. +++.||+++...++|.+++.++. ...+ .+ .
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd----------~dG~l~va~~~~~~V~~~~~~G~----~~~~~~~~~ 252 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFD----------VEGNLYGATHIYNSVVRIAPDRS----TTIIAQAEQ 252 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEB----------TTCCEEEECBTTCCEEEECTTCC----EEEEECGGG
T ss_pred CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEEC----------CCCCEEEEeCCCCeEEEECCCCC----EEEEeeccc
Confidence 999999999754 32 23344445578888777 46789999987799999987755 1111 12 2
Q ss_pred CCCCceEEEEE---cCCCEEEEEECC
Q psy14258 354 DLKRPSVIDYH---EKEEYIYYAELT 376 (440)
Q Consensus 354 ~~~~p~~l~~d---~~~~~vy~~d~~ 376 (440)
.+..|.+++|+ +.++.||+++..
T Consensus 253 ~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 253 GVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp TCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ccCCceEEEEecccCCCCEEEEECCC
Confidence 35689999998 778999999864
No 45
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.71 E-value=4e-15 Score=141.92 Aligned_cols=243 Identities=12% Similarity=0.090 Sum_probs=167.4
Q ss_pred eeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcC-------------------CCCCceEEEEcCCCC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDL-------------------NLSKPRGIALDPTSG 184 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~-------------------~~~~P~~iavd~~~g 184 (440)
+...+..|++ |+|.. +++||+ ++|.+.+.++...+.+... ....|.+|++|+..|
T Consensus 14 ~~g~~~~p~~i~~d~~-g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g 92 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDST-NKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN 92 (322)
T ss_dssp EECSSSCCCCEECCTT-CSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT
T ss_pred cCCccCCceEEEEcCC-CCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC
Confidence 3345788999 99986 455555 7899999887655444321 124799999998679
Q ss_pred eEEEEEcCCCCCcEEEEeCCCCCceeEEec----CccCceEEEEeCCCCEEEEEeCCC-----------------CcEEE
Q psy14258 185 YMFFTKWGATRPMLERSLLDGTERFPMVTH----KIVYPYGVTVDFPTKHVYWVDTYL-----------------DFIDR 243 (440)
Q Consensus 185 ~lywtd~~~~~~~I~r~~~dG~~~~~l~~~----~~~~P~gl~vD~~~~~ly~~d~~~-----------------~~i~~ 243 (440)
.||+++.. ..|.+.+.++...+.+... .+..|+++++|+..++||++|... +.|.+
T Consensus 93 ~l~v~d~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 93 QLYIVDCY---YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp EEEEEETT---TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred cEEEEECC---CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 99999977 3699999886544444321 245799999995377999999652 57888
Q ss_pred EEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCC--ceEEEecCCCCeEEEEeccCCCCCCCC
Q psy14258 244 INYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSD--DYETIANFSRPFAIHIYHRQKQPDALK 319 (440)
Q Consensus 244 ~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~--~~~~~~~~~~p~~~~v~~~~~qp~~~~ 319 (440)
++.++...+.+..+ +..|.||++..+ .||++|..+++|++++..+.. ..+++.....|.++.+.
T Consensus 170 ~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~gP~gi~~d---------- 237 (322)
T 2fp8_A 170 YDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRN---------- 237 (322)
T ss_dssp EETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSSEEEEEEC----------
T ss_pred EeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCCCCCeEEC----------
Confidence 88776655555443 678999999854 799999999999999876432 22333222238888766
Q ss_pred CceeEEeecCC----------ccEEEEEEcCCCCCCceeeeeecC---CCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 320 PSTFLLYAKGK----------PAIIKGLTFKRDGTTEQAIMPITD---LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 320 ~~~~l~~~~~~----------~~~I~~i~~~~~~~~~~~~~~~~~---~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+++.|++++.. .+.|.+++.++. .. ..+.... +..|.+++++ ++.||+++...+.|.+++++
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~-~~--~~~~~~~g~~~~~~~~~~~~--~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGN-IL--EVIPLPPPFAGEHFEQIQEH--DGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECTTSC-EE--EEEECCTTTTTSCCCEEEEE--TTEEEEECSSCSEEEEEEC-
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECCCCC-EE--EEEECCCCCccccceEEEEe--CCEEEEeecCCCceEEEecc
Confidence 46678888754 467888887655 11 1122222 4567888774 68999999999999999988
Q ss_pred CCCeEE
Q psy14258 387 GRGKEV 392 (440)
Q Consensus 387 g~~~~~ 392 (440)
.....+
T Consensus 313 ~~~~~~ 318 (322)
T 2fp8_A 313 KKGNSF 318 (322)
T ss_dssp ------
T ss_pred cccCcc
Confidence 654433
No 46
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.71 E-value=3.8e-14 Score=135.61 Aligned_cols=245 Identities=9% Similarity=-0.020 Sum_probs=175.7
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecCC-ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHYM-EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~dg-~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
.|.+ ++| +++||++ +.|.+.+... +....+ . ....|++|++++ .|+||+++... .+|.+.++.....
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i-~-~~~~p~~i~~~~-~g~lyv~~~~~--~~v~~iD~~t~~~ 117 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRI-T-GFTSPRYIHFLS-DEKAYVTQIWD--YRIFIINPKTYEI 117 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEE-E-CCSSEEEEEEEE-TTEEEEEEBSC--SEEEEEETTTTEE
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEc-C-CCCCCcEEEEeC-CCeEEEEECCC--CeEEEEECCCCeE
Confidence 4777 775 6889999 6899999874 443444 3 457899999987 47999999543 5899999875433
Q ss_pred eeEEecC-----ccCceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCC-cEEEecCCccCceeeeeEec-CEEEEEecCC
Q psy14258 209 FPMVTHK-----IVYPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFE-NNLFVTSWRN 280 (440)
Q Consensus 209 ~~l~~~~-----~~~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~ 280 (440)
...+... ...|.+|+++ +++||+++.+ .+.|..++..... ...+.. ...|.++++.. +.+|++....
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~~--~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~---g~~p~~i~~~~dG~l~v~~~~~ 192 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQY--GKYVYVNCWSYQNRILKIDTETDKVVDELTI---GIQPTSLVMDKYNKMWTITDGG 192 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEEE--TTEEEEEECTTCCEEEEEETTTTEEEEEEEC---SSCBCCCEECTTSEEEEEBCCB
T ss_pred EEEEEcCCccccCCCcceEEEE--CCEEEEEcCCCCCEEEEEECCCCeEEEEEEc---CCCccceEEcCCCCEEEEECCC
Confidence 3222221 1279999995 8999999984 7899999986443 333333 34799999986 4999998865
Q ss_pred ----------CeEEEEeccCCCceEEEec--CCCCeEEEEeccCCCCCCCCC-ceeEEeecCCccEEEEEEcCCCCCCce
Q psy14258 281 ----------QSIIRVNKFNSDDYETIAN--FSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQ 347 (440)
Q Consensus 281 ----------~~i~~~~~~~g~~~~~~~~--~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~ 347 (440)
+.|++++..+++....+.- ...|.++.+. | +.+||+++. .|.+++++.......
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~----------~d~~~lyv~~~---~v~~~d~~t~~~~~~ 259 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLN----------GTRDTLYWINN---DIWRMPVEADRVPVR 259 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEEC----------TTSCEEEEESS---SEEEEETTCSSCCSS
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEe----------cCCCEEEEEcc---EEEEEECCCCceeee
Confidence 7899999887765544432 2368888877 3 367888875 788888865411110
Q ss_pred eeeeecCCCCceEEEEEcCCCEEEEEE----CCCCeEEEEecCCCCeEEEEECCCCCeeeEEEe
Q psy14258 348 AIMPITDLKRPSVIDYHEKEEYIYYAE----LTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVD 407 (440)
Q Consensus 348 ~~~~~~~~~~p~~l~~d~~~~~vy~~d----~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD 407 (440)
..++. +...|.++++|+.++.||+++ ...++|++++++|.....+ ..| ..|.++|+-
T Consensus 260 ~~~~~-~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i-~~G-~~P~~~~~~ 320 (328)
T 3dsm_A 260 PFLEF-RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEF-YVG-IIPGAFCWK 320 (328)
T ss_dssp CSBCC-CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEE-EEE-ESEEEEEEE
T ss_pred eeecC-CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEE-Eec-cCcceEEEe
Confidence 11111 146899999999899999999 7889999999997655444 333 579999874
No 47
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.69 E-value=9.8e-15 Score=137.56 Aligned_cols=194 Identities=12% Similarity=0.128 Sum_probs=144.0
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe--ceEEEEecC
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP--EAIYFCTHY 159 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~--~~I~~~~~d 159 (440)
+.+..+++.++.|||+|...++|++.+.++..... + ..-..|.+ ++|+.++ ||++ ..|.+.+.+
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-----------~-~~~~~~~~i~~~~dG~-l~v~~~~~l~~~d~~ 81 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQR-----------V-TMDAPVSSVALRQSGG-YVATIGTKFCALNWK 81 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEE-----------E-ECSSCEEEEEEBTTSS-EEEEETTEEEEEETT
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEE-----------E-eCCCceEEEEECCCCC-EEEEECCeEEEEECC
Confidence 88999999899999999999999998876543221 1 11246888 9998766 7777 789999998
Q ss_pred CceEEEEEcC----CCCCceEEEEcCCCCeEEEEEcCC---------CCCcEEEEeCCCCCceeEEecCccCceEEEEeC
Q psy14258 160 MEHCMIAIDL----NLSKPRGIALDPTSGYMFFTKWGA---------TRPMLERSLLDGTERFPMVTHKIVYPYGVTVDF 226 (440)
Q Consensus 160 g~~~~~~~~~----~~~~P~~iavd~~~g~lywtd~~~---------~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~ 226 (440)
+...+.+... ....|.++++|| .|.||+++... ...+|++.+.+|.... +...+..|+|+++++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~--~~~~~~~pngi~~sp 158 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK--YFDQVDISNGLDWSL 158 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--EEEEESBEEEEEECT
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEE--EeeccccccceEEcC
Confidence 7666555542 234589999999 68899987532 1247999998875433 334577899999999
Q ss_pred CCCEEEEEeCCCCcEEEEEcc---CC--CcEEEec-CCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCC
Q psy14258 227 PTKHVYWVDTYLDFIDRINYD---GT--DRKTIRK-GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSD 292 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~d---G~--~~~~i~~-~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~ 292 (440)
.++.|||+|...++|.+++++ |. +.+.+.. ......|.|++++.+ +||++.+..+.|.++++.+|+
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCC
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCce
Confidence 899999999999999999875 22 1233332 112357999999854 999999988888888876554
No 48
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=2.6e-13 Score=129.81 Aligned_cols=266 Identities=9% Similarity=0.055 Sum_probs=185.2
Q ss_pred EEEEEeeecccEEEEEEcC------CCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----c
Q psy14258 83 AIYFCTHYMEHCMIAIDLN------LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----E 151 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~------~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~ 151 (440)
+.++++++.+++||+++.. .+.|+.++....... .. + .....|.+ ++++.++.+|++ +
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~--------~~--~-~~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT--------QA--I-HNDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE--------EE--E-EESSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE--------EE--E-ecCCCcceEEECCCCCEEEEEecCCC
Confidence 8899999999999999975 456666555432211 11 1 22346899 999999989998 6
Q ss_pred eEEEEecCCceE-EEEEcCCCC--------CceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEE
Q psy14258 152 AIYFCTHYMEHC-MIAIDLNLS--------KPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGV 222 (440)
Q Consensus 152 ~I~~~~~dg~~~-~~~~~~~~~--------~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl 222 (440)
.|.+.+++.... ..+-..... .|.+++++|..++||+++.+.. .+|...+++.......+......|.++
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~-~~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKE-SVIWVVDGGNIKLKTAIQNTGKMSTGL 190 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSS-CEEEEEETTTTEEEEEECCCCTTCCCC
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCC-ceEEEEcCCCCceEEEecCCCCccceE
Confidence 899999875444 333222111 3899999998888999997544 689999987554433333233459999
Q ss_pred EEeCCCCEEEEEeCCCCcEEEEEccCCCcE-EEecCC--ccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 223 TVDFPTKHVYWVDTYLDFIDRINYDGTDRK-TIRKGF--PVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 223 ~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~-~i~~~~--~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
++++.+++||+++. .+.|..++....... .+..+. ....|.++++. ++.+|+++...+.|..++..+++....+
T Consensus 191 ~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 269 (353)
T 3vgz_A 191 ALDSEGKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV 269 (353)
T ss_dssp EEETTTTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred EECCCCCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 99999999999975 678888887544333 332211 13457788887 4489999988899999998777765544
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECC
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELT 376 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~ 376 (440)
. ...|.++.+. |+ .+|++++...+.|..+++... .....+.....|.++++++.++.+|++...
T Consensus 270 ~-~~~~~~~~~s----------~dg~~l~v~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 270 A-APESLAVLFN----------PARNEAYVTHRQAGKVSVIDAKSY----KVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp E-CSSCCCEEEE----------TTTTEEEEEETTTTEEEEEETTTT----EEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred E-cCCCceEEEC----------CCCCEEEEEECCCCeEEEEECCCC----eEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 3 2335555444 23 568888876789999988655 233233333478999999999999999754
No 49
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.67 E-value=1.8e-14 Score=139.20 Aligned_cols=247 Identities=13% Similarity=0.057 Sum_probs=172.7
Q ss_pred eeccccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEE-----cCCCCCceEEEEcCC---CCeEEEEEcC-CCC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAI-----DLNLSKPRGIALDPT---SGYMFFTKWG-ATR 195 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~-----~~~~~~P~~iavd~~---~g~lywtd~~-~~~ 195 (440)
+..++..|.+ |+++.++ ||++ ++|.+.+.+|. +.+. ......|.||+++|. +|+||+++.. ...
T Consensus 24 va~~l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 24 VASDLEVPWSIAPLGGGR-YLVTERPGRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp EECSCSCEEEEEEEETTE-EEEEETTTEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred EeCCCCCCeEEEEcCCCe-EEEEeCCCEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 4567899999 9998765 9999 79999988886 3332 234567999999997 7999999863 111
Q ss_pred ----CcEEEEeCCCC-----CceeEEe----cCccCceEEEEeCCCCEEEEEeCC-------------CCcEEEEEccCC
Q psy14258 196 ----PMLERSLLDGT-----ERFPMVT----HKIVYPYGVTVDFPTKHVYWVDTY-------------LDFIDRINYDGT 249 (440)
Q Consensus 196 ----~~I~r~~~dG~-----~~~~l~~----~~~~~P~gl~vD~~~~~ly~~d~~-------------~~~i~~~~~dG~ 249 (440)
.+|.|.+.++. ..++++. .....|++|++++ .++||++... .++|.+++.+|+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~ 179 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGR 179 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSC
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCC
Confidence 38999999876 2334433 1244689999996 5689999632 358999999997
Q ss_pred --------CcEEEecCCccCceeeeeEec--CEEEEEecCCCe---EEEEeccCCCc-----------------e-EEE-
Q psy14258 250 --------DRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQS---IIRVNKFNSDD-----------------Y-ETI- 297 (440)
Q Consensus 250 --------~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~---i~~~~~~~g~~-----------------~-~~~- 297 (440)
..++...+ +++|.||+++. +.||++|...+. |..+.+ |.. . ..+
T Consensus 180 ~p~~npf~~~~i~a~G--~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~--G~nyGwp~~~g~~~~~~~~~p~~~~~ 255 (354)
T 3a9g_A 180 PPADNPFPNSPIWSYG--HRNPQGIDWHRASGVMVATEHGPVGHDEVNIILK--GGNYGWPLATGKAGRGEFVDPVIDTG 255 (354)
T ss_dssp CCTTSSSTTCCEEEEC--CSCCCEEEECTTTCCEEEEECCSSSCCEEEEECT--TCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCCCCCcEEEEc--cCCcceEEEeCCCCCEEEEecCCCCCcEEEEecC--CCcCCCCcccCCCCCCCCcCCEeecC
Confidence 44555556 88999999996 599999987654 554443 210 1 111
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEEEEEcCCCEEEEEECC
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHEKEEYIYYAELT 376 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~ 376 (440)
.....|.++.++....-|. .++.|++++...++|.++.+++.+...+....+. ...+|.++++++++ .||+++..
T Consensus 256 ~~~~ap~G~~~y~g~~fp~---~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG-~lyv~~~~ 331 (354)
T 3a9g_A 256 SETWAPSGASFVHGDMFPG---LRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG-GILISTSN 331 (354)
T ss_dssp TCCCCEEEEEECCSSSCGG---GTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS-CEEEEECT
T ss_pred CCCcCCcceEEECCCCCcc---cCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC-cEEEEEeC
Confidence 1123588888886444442 3578999988888999999986522211111222 25689999999965 79999863
Q ss_pred -CC---------eEEEEecCC
Q psy14258 377 -SY---------VIERRKMFG 387 (440)
Q Consensus 377 -~~---------~I~r~~~~g 387 (440)
.+ +|+|+...|
T Consensus 332 ~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 332 RDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp TSSSSCCCTTCSCEEEEEETT
T ss_pred CCCCcCCCCCCCEEEEEecCC
Confidence 44 899998766
No 50
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.67 E-value=6.4e-13 Score=127.12 Aligned_cols=266 Identities=11% Similarity=0.045 Sum_probs=188.5
Q ss_pred ccccce-eeeecCCcEEEe--c--------eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEE
Q psy14258 133 LLDGTE-RFPMVTHKIVYP--E--------AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERS 201 (440)
Q Consensus 133 ~~~p~~-avD~~~~~lY~~--~--------~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~ 201 (440)
...|.+ ++++.++.||++ + .|.+.++++......+.. -..|.+++++|..++||+++... ..|...
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~--~~v~~~ 116 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVN--SAVTAI 116 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTT--TEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCC--CEEEEE
Confidence 346888 999999999998 2 688888876544333332 24699999999877899999875 589999
Q ss_pred eCCCCCceeEEecC-c--------cCceEEEEeCCCCEEEEEeC-CCCcEEEEEccCCCcEEEecCCccCceeeeeEec-
Q psy14258 202 LLDGTERFPMVTHK-I--------VYPYGVTVDFPTKHVYWVDT-YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE- 270 (440)
Q Consensus 202 ~~dG~~~~~l~~~~-~--------~~P~gl~vD~~~~~ly~~d~-~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~- 270 (440)
+++.......+... . ..|.++++++.+++||+++. ..+.|..++............ ....|.++++..
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~s~d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQN-TGKMSTGLALDSE 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECC-CCTTCCCCEEETT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecC-CCCccceEEECCC
Confidence 98654433333321 1 13899999999999999984 467899998865544333331 134588888864
Q ss_pred -CEEEEEecCCCeEEEEeccCCCceEEEec-C----CCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCC
Q psy14258 271 -NNLFVTSWRNQSIIRVNKFNSDDYETIAN-F----SRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDG 343 (440)
Q Consensus 271 -~~ly~td~~~~~i~~~~~~~g~~~~~~~~-~----~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~ 343 (440)
+.||+++. .+.|..++..+++....+.. . ..|.++.+. |+ .+|++++...+.|..+++...
T Consensus 196 g~~l~~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s----------~dg~~l~~~~~~~~~v~~~d~~~~- 263 (353)
T 3vgz_A 196 GKRLYTTNA-DGELITIDTADNKILSRKKLLDDGKEHFFINISLD----------TARQRAFITDSKAAEVLVVDTRNG- 263 (353)
T ss_dssp TTEEEEECT-TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEE----------TTTTEEEEEESSSSEEEEEETTTC-
T ss_pred CCEEEEEcC-CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEEC----------CCCCEEEEEeCCCCEEEEEECCCC-
Confidence 48999886 78898999877766554432 1 124445554 23 578888876789999988654
Q ss_pred CCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCC
Q psy14258 344 TTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 344 ~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
.....+. ...|.+++|++.++++|+++...+.|...++........+..+ ..|.++++++.++.||++...
T Consensus 264 ---~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 264 ---NILAKVA-APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---CEEEEEE-CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred ---cEEEEEE-cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 1111111 3457889999999999999998999999998754433334433 579999999989899999754
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=1.2e-13 Score=129.76 Aligned_cols=240 Identities=13% Similarity=0.068 Sum_probs=171.4
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEc-
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINY- 246 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~- 246 (440)
......|.+++.||..+.|||++... .+|.+.+.++. .+ .+......|.+|++|+ .++||+++...+.|.+++.
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~--~~i~~~~~~~~-~~-~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQ--NRTWAWSDDGQ-LS-PEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGG--TEEEEEETTSC-EE-EEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECST
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCC--CEEEEEECCCC-eE-EEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCC
Confidence 34678899999999655699999875 59999999987 43 3444556799999995 6679999988889999998
Q ss_pred cCCCcEEEec---CCccCceeeeeEecC-EEEEEec-----------------CCCeEEEEeccCCCceEEEecCCCCeE
Q psy14258 247 DGTDRKTIRK---GFPVQNLYDITVFEN-NLFVTSW-----------------RNQSIIRVNKFNSDDYETIANFSRPFA 305 (440)
Q Consensus 247 dG~~~~~i~~---~~~~~~p~gl~~~~~-~ly~td~-----------------~~~~i~~~~~~~g~~~~~~~~~~~p~~ 305 (440)
+|. .+.+.. +.....|.+++++.+ .+|++|. ..+.|++++.. ++...+......|.+
T Consensus 99 ~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGE-WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TCC-EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCc-EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 554 443332 222456888999865 8999875 24589999875 544444455667888
Q ss_pred EEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCC-ceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEe
Q psy14258 306 IHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTT-EQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRK 384 (440)
Q Consensus 306 ~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~-~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~ 384 (440)
+.+. |++.+++++...+.|++++++..+.. ............|.++++|+.+ .+|+++ .+.|.+.+
T Consensus 177 i~~s----------~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 177 LAFL----------PSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGVHVLT 243 (296)
T ss_dssp EEEC----------TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEEEEEC
T ss_pred EEEC----------CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeEEEEC
Confidence 8765 34333388887789999998743222 1111112234578899999875 599998 78999999
Q ss_pred cCCCCeEEEEECCCCCeeeEEEe-cCCCcEEEEeCCCCeEEEEEeCCC
Q psy14258 385 MFGRGKEVVIDTGIYNVEGMAVD-WMANNLYWTDAGIGTINVAKISDF 431 (440)
Q Consensus 385 ~~g~~~~~~~~~~~~~~~glAvD-~~~~~lYwtd~~~~~I~~~~~~g~ 431 (440)
++|.....+ ..... |..++++ ..++.||++.. +.+.++++..+
T Consensus 244 ~~g~~~~~~-~~~~~-~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~~ 287 (296)
T 3e5z_A 244 PDGDELGRV-LTPQT-TSNLCFGGPEGRTLYMTVS--TEFWSIETNVR 287 (296)
T ss_dssp TTSCEEEEE-ECSSC-CCEEEEESTTSCEEEEEET--TEEEEEECSCC
T ss_pred CCCCEEEEE-ECCCC-ceeEEEECCCCCEEEEEcC--CeEEEEEcccc
Confidence 997644444 33334 9999995 56778999975 57888888764
No 52
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.66 E-value=2.7e-14 Score=138.00 Aligned_cols=230 Identities=12% Similarity=0.037 Sum_probs=156.9
Q ss_pred eeccccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEE-----cCCCCCceEEEEcCC---CCeEEEEEcCCCC-
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAI-----DLNLSKPRGIALDPT---SGYMFFTKWGATR- 195 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~-----~~~~~~P~~iavd~~---~g~lywtd~~~~~- 195 (440)
+..++..|.+ |+++.++ ||++ ++|.+.+ +|+.. .+. ...+..|.||+++|. +++||+++.....
T Consensus 26 va~~l~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~g~~~-~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~ 102 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDGG-MLIAERPGRIRLFR-EGRLS-TYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGG 102 (352)
T ss_dssp EECCCSCEEEEEECTTSC-EEEEETTTEEEEEE-TTEEE-EEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTS
T ss_pred EECCCCCceEEEEcCCCe-EEEEeCCCeEEEEE-CCCcc-EeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCC
Confidence 4567889999 9998776 9999 7899998 77543 222 234678999999997 7899999874311
Q ss_pred --CcEEEEeCCCC---CceeEEe------cCccCceEEEEeCCCCEEEEEeC-------------CCCcEEEEEccC---
Q psy14258 196 --PMLERSLLDGT---ERFPMVT------HKIVYPYGVTVDFPTKHVYWVDT-------------YLDFIDRINYDG--- 248 (440)
Q Consensus 196 --~~I~r~~~dG~---~~~~l~~------~~~~~P~gl~vD~~~~~ly~~d~-------------~~~~i~~~~~dG--- 248 (440)
.+|.|.+.++. ..++++. .....|.+|++++ .++||+++. ..++|.+++.+|
T Consensus 103 ~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p 181 (352)
T 2ism_A 103 LRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPA 181 (352)
T ss_dssp SEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBC
T ss_pred CccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCC
Confidence 48999999864 2334433 1234689999996 559999973 236899999998
Q ss_pred ----------CCcEEEecCCccCceeeeeEec--CEEEEEecCCCe--------EEEEeccC--C--------------C
Q psy14258 249 ----------TDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQS--------IIRVNKFN--S--------------D 292 (440)
Q Consensus 249 ----------~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~--------i~~~~~~~--g--------------~ 292 (440)
...++...+ +++|.|++++. +.||++|...+. |.++.+-. | .
T Consensus 182 ~~npf~~~~~~~~~i~a~G--~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 259 (352)
T 2ism_A 182 PGNPFLGRRGARPEVYSLG--HRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRD 259 (352)
T ss_dssp TTCTTTTCTTSCTTEEEEC--CSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred CCCcccCCCCCCccEEEEc--CCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcC
Confidence 344555555 78999999995 599999987665 55554311 0 0
Q ss_pred ceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCC---ceeeeeecCCCCceEEEEEcCCCE
Q psy14258 293 DYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTT---EQAIMPITDLKRPSVIDYHEKEEY 369 (440)
Q Consensus 293 ~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~---~~~~~~~~~~~~p~~l~~d~~~~~ 369 (440)
....+.....|.++.++ ++.||+++...++|.++.+++.+.. .+....+....+|.+++++++ +.
T Consensus 260 p~~~~~~~~ap~G~~~~-----------~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pd-G~ 327 (352)
T 2ism_A 260 PLYFWPQGFPPGNLAFF-----------RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPD-GA 327 (352)
T ss_dssp CSEECTTCCCEEEEEEE-----------TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTT-SC
T ss_pred CeEecCCCCCCcceEEE-----------CCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCC-Cc
Confidence 00011112246666664 4678899887789999999866321 111112244678999999996 47
Q ss_pred EEEEECC
Q psy14258 370 IYYAELT 376 (440)
Q Consensus 370 vy~~d~~ 376 (440)
||+++..
T Consensus 328 lyv~~~~ 334 (352)
T 2ism_A 328 LYVTTSN 334 (352)
T ss_dssp EEEEECS
T ss_pred EEEEEeC
Confidence 9999864
No 53
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.66 E-value=9.1e-14 Score=134.28 Aligned_cols=247 Identities=15% Similarity=0.127 Sum_probs=170.9
Q ss_pred EEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe-----cCccCceEEEEeCC---CCEEEEEeC
Q psy14258 165 IAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT-----HKIVYPYGVTVDFP---TKHVYWVDT 236 (440)
Q Consensus 165 ~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~-----~~~~~P~gl~vD~~---~~~ly~~d~ 236 (440)
.++...+..|++|+++| .|.||+++.. ++|.+.+.+|. +.+.. .....|.||++++. +++||+++.
T Consensus 22 ~~va~~l~~P~~ia~~p-dG~l~V~e~~---g~I~~~d~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~ 95 (354)
T 3a9g_A 22 SEVASDLEVPWSIAPLG-GGRYLVTERP---GRLVLISPSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYAS 95 (354)
T ss_dssp EEEECSCSCEEEEEEEE-TTEEEEEETT---TEEEEECSSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred EEEeCCCCCCeEEEEcC-CCeEEEEeCC---CEEEEEeCCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEe
Confidence 34456899999999999 6899999987 59999987776 33322 23567999999987 799999986
Q ss_pred C---C----CcEEEEEccCC-----CcEEEec---CCccCceeeeeEecC-EEEEEecC-------------CCeEEEEe
Q psy14258 237 Y---L----DFIDRINYDGT-----DRKTIRK---GFPVQNLYDITVFEN-NLFVTSWR-------------NQSIIRVN 287 (440)
Q Consensus 237 ~---~----~~i~~~~~dG~-----~~~~i~~---~~~~~~p~gl~~~~~-~ly~td~~-------------~~~i~~~~ 287 (440)
. . ++|.+++.++. ..+++.. ....+.|.+|++..| .||++... .++|.|++
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~ 175 (354)
T 3a9g_A 96 YFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVD 175 (354)
T ss_dssp EECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEEC
T ss_pred ccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEc
Confidence 4 3 68999998875 2344433 122456888998765 99999632 36899999
Q ss_pred ccCCC--------ceEEE-ecCCCCeEEEEeccCCCCCCCCC-ceeEEeecCCcc---EEEEEEcCCC-C--------CC
Q psy14258 288 KFNSD--------DYETI-ANFSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPA---IIKGLTFKRD-G--------TT 345 (440)
Q Consensus 288 ~~~g~--------~~~~~-~~~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~---~I~~i~~~~~-~--------~~ 345 (440)
.. |+ ..+++ .++.+|.++.+. | .+.|++++.... .|.++...+. + ..
T Consensus 176 ~d-G~~p~~npf~~~~i~a~G~rnp~Gla~d----------~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~ 244 (354)
T 3a9g_A 176 EE-GRPPADNPFPNSPIWSYGHRNPQGIDWH----------RASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGR 244 (354)
T ss_dssp TT-SCCCTTSSSTTCCEEEECCSCCCEEEEC----------TTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred CC-CCCCCCCCCCCCcEEEEccCCcceEEEe----------CCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCC
Confidence 75 43 23333 456678898776 4 467999887643 4555543221 0 00
Q ss_pred ceeeeeec----CCCCceEEEE-------EcCCCEEEEEECCCCeEEEEecCCCC----eEEEEECCCCCeeeEEEecCC
Q psy14258 346 EQAIMPIT----DLKRPSVIDY-------HEKEEYIYYAELTSYVIERRKMFGRG----KEVVIDTGIYNVEGMAVDWMA 410 (440)
Q Consensus 346 ~~~~~~~~----~~~~p~~l~~-------d~~~~~vy~~d~~~~~I~r~~~~g~~----~~~~~~~~~~~~~glAvD~~~ 410 (440)
.....|+. ....|.+++| ++ .+.+|+++...++|.++.+++.+ .+.++......|.+|++++.+
T Consensus 245 ~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~-~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 245 GEFVDPVIDTGSETWAPSGASFVHGDMFPGL-RGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDG 323 (354)
T ss_dssp TTSCCCSEECTTCCCCEEEEEECCSSSCGGG-TTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTS
T ss_pred CCCcCCEeecCCCCcCCcceEEECCCCCccc-CCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCC
Confidence 01112221 2346889999 44 57899999999999999998642 123332225689999999865
Q ss_pred CcEEEEeCC-CC---------eEEEEEeCC
Q psy14258 411 NNLYWTDAG-IG---------TINVAKISD 430 (440)
Q Consensus 411 ~~lYwtd~~-~~---------~I~~~~~~g 430 (440)
.||+++.. .+ +|.++...|
T Consensus 324 -~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 324 -GILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp -CEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred -cEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 79999863 44 899988877
No 54
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.65 E-value=4.2e-14 Score=136.63 Aligned_cols=234 Identities=16% Similarity=0.145 Sum_probs=159.1
Q ss_pred EEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe-----cCccCceEEEEeCC---CCEEEEEeCC
Q psy14258 166 AIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT-----HKIVYPYGVTVDFP---TKHVYWVDTY 237 (440)
Q Consensus 166 ~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~-----~~~~~P~gl~vD~~---~~~ly~~d~~ 237 (440)
++...+..|++|+++| .|.||+++.. ++|.+.+ +|.. +.+.. .....|.||++++. +++||+++..
T Consensus 25 ~va~~l~~P~~ia~~p-dG~l~V~e~~---g~I~~i~-~g~~-~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 25 EVVGGLEVPWALAFLP-DGGMLIAERP---GRIRLFR-EGRL-STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp EEECCCSCEEEEEECT-TSCEEEEETT---TEEEEEE-TTEE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EEECCCCCceEEEEcC-CCeEEEEeCC---CeEEEEE-CCCc-cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 3455789999999999 6889999976 5999999 7753 22221 23568999999977 7899999975
Q ss_pred C-----CcEEEEEccCC---CcEEEec--C---CccCceeeeeEecC-EEEEEecC-------------CCeEEEEeccC
Q psy14258 238 L-----DFIDRINYDGT---DRKTIRK--G---FPVQNLYDITVFEN-NLFVTSWR-------------NQSIIRVNKFN 290 (440)
Q Consensus 238 ~-----~~i~~~~~dG~---~~~~i~~--~---~~~~~p~gl~~~~~-~ly~td~~-------------~~~i~~~~~~~ 290 (440)
. ++|.+++.++. ..+++.. . .....|.+|++..+ +||+++.. .++|.+++..+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 4 78999998864 2333333 1 12456889999765 99999742 36899998753
Q ss_pred C------------CceEEE-ecCCCCeEEEEeccCCCCCCCCC-ceeEEeecCCccE--------EEEEEcCCC-CC---
Q psy14258 291 S------------DDYETI-ANFSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPAI--------IKGLTFKRD-GT--- 344 (440)
Q Consensus 291 g------------~~~~~~-~~~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~--------I~~i~~~~~-~~--- 344 (440)
. ...+++ .++.+|.++.+. | .+.|++++...+. |.++...+. +.
T Consensus 179 ~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d----------~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~ 248 (352)
T 2ism_A 179 EPAPGNPFLGRRGARPEVYSLGHRNPQGLAWH----------PKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRV 248 (352)
T ss_dssp SBCTTCTTTTCTTSCTTEEEECCSEECCCEEC----------TTTCCEEEEEECC------CCCEEEEECTTCBCCTTTC
T ss_pred CCCCCCcccCCCCCCccEEEEcCCCcccEEEE----------CCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcc
Confidence 1 122233 345567777665 4 4679998876554 655543331 00
Q ss_pred -----Cceeeeee---cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCC-------eEEEEECCCCCeeeEEEecC
Q psy14258 345 -----TEQAIMPI---TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRG-------KEVVIDTGIYNVEGMAVDWM 409 (440)
Q Consensus 345 -----~~~~~~~~---~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~-------~~~~~~~~~~~~~glAvD~~ 409 (440)
......|+ .....|.|++| + ++.+|+++...++|.++.+++.. .+.++. ....|.+|++++.
T Consensus 249 ~g~~~~~~~~~p~~~~~~~~ap~G~~~-~-~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pd 325 (352)
T 2ism_A 249 VGRGNDPRYRDPLYFWPQGFPPGNLAF-F-RGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALS-GFGRLREVQVGPD 325 (352)
T ss_dssp CSCCCCTTSCCCSEECTTCCCEEEEEE-E-TTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEE-SSCCEEEEEECTT
T ss_pred cCCCCCCCCcCCeEecCCCCCCcceEE-E-CCEEEEEECCCCEEEEEEECCCCcceeecchheecc-cCCCeeEEEECCC
Confidence 00011122 22346889999 3 57899999999999999998543 234443 4578999999986
Q ss_pred CCcEEEEeCC
Q psy14258 410 ANNLYWTDAG 419 (440)
Q Consensus 410 ~~~lYwtd~~ 419 (440)
+ .||+++..
T Consensus 326 G-~lyv~~~~ 334 (352)
T 2ism_A 326 G-ALYVTTSN 334 (352)
T ss_dssp S-CEEEEECS
T ss_pred C-cEEEEEeC
Confidence 5 79999864
No 55
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.65 E-value=3.5e-13 Score=126.84 Aligned_cols=236 Identities=8% Similarity=-0.000 Sum_probs=170.5
Q ss_pred EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEE
Q psy14258 164 MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDR 243 (440)
Q Consensus 164 ~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~ 243 (440)
+.++......++|.+.|+..+.|||+|... .+|.+.++++...+.+.. ...|.++++++. ++||++. .+.|.+
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~--~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~d-G~l~v~~--~~~l~~ 77 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPA--KKVCRWDSFTKQVQRVTM--DAPVSSVALRQS-GGYVATI--GTKFCA 77 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEEC--SSCEEEEEEBTT-SSEEEEE--TTEEEE
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCC--CEEEEEECCCCcEEEEeC--CCceEEEEECCC-CCEEEEE--CCeEEE
Confidence 455666778899999999999999999876 599999998765543322 357999999955 4587776 468999
Q ss_pred EEccCCCcEEEecC---CccCceeeeeEecC-EEEEEecC-----------CCeEEEEeccCCCceEEEecCCCCeEEEE
Q psy14258 244 INYDGTDRKTIRKG---FPVQNLYDITVFEN-NLFVTSWR-----------NQSIIRVNKFNSDDYETIANFSRPFAIHI 308 (440)
Q Consensus 244 ~~~dG~~~~~i~~~---~~~~~p~gl~~~~~-~ly~td~~-----------~~~i~~~~~~~g~~~~~~~~~~~p~~~~v 308 (440)
++.++...+.+... .....|.+++++.+ .+|++++. .+.|++++.. ++...+......|.++.+
T Consensus 78 ~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 78 LNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDW 156 (297)
T ss_dssp EETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEE
T ss_pred EECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEE
Confidence 99876666555432 12456889999854 89998743 3578888873 444445556667888877
Q ss_pred eccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCC-CCCc--eeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEE
Q psy14258 309 YHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRD-GTTE--QAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERR 383 (440)
Q Consensus 309 ~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~-~~~~--~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~ 383 (440)
. |+ ..||++++..++|.+++++.. +... .....+. ....|.++++|+.+ .||+++...++|.++
T Consensus 157 s----------pdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~ 225 (297)
T 3g4e_A 157 S----------LDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRL 225 (297)
T ss_dssp C----------TTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEE
T ss_pred c----------CCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEE
Confidence 6 34 579999987789999998632 1211 1111111 22468999999875 699999888999999
Q ss_pred ecC-CCCeEEEEECCCCCeeeEEEe-cCCCcEEEEeCC
Q psy14258 384 KMF-GRGKEVVIDTGIYNVEGMAVD-WMANNLYWTDAG 419 (440)
Q Consensus 384 ~~~-g~~~~~~~~~~~~~~~glAvD-~~~~~lYwtd~~ 419 (440)
+++ |.-.. .+......|..+|+. +..+.||+|...
T Consensus 226 d~~tG~~~~-~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 226 DPVTGKRLQ-TVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CTTTCCEEE-EEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred cCCCceEEE-EEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 998 54333 334455689999998 677899999864
No 56
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=2.3e-13 Score=128.38 Aligned_cols=249 Identities=16% Similarity=0.127 Sum_probs=173.2
Q ss_pred cCCCCCceEEEEcCCCCeEEEE-------EcCCCCCcEEEEeCCCCCceeEEe----cCccCceEEEEeCCCCEEEEEeC
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFT-------KWGATRPMLERSLLDGTERFPMVT----HKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywt-------d~~~~~~~I~r~~~dG~~~~~l~~----~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
...+..|.++++|+ .|.||++ +... ++|.+.+++......+.. .....|.++++|+.+++||+++.
T Consensus 14 ~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~ 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPA--GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM 90 (314)
T ss_dssp ECCCTTCEEEEECT-TSCEEEEETTCEETTEEC--CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET
T ss_pred hccCCCccCceECC-CCCEEEEEeccccCCCCC--CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC
Confidence 45788999999996 7899999 5443 589999875444333322 02357999999965589999986
Q ss_pred CCCcEEEEEccCCCcEEE-ec---CCccCceeeeeEecC-EEEEEecCC---------------CeEEEEeccCCCceEE
Q psy14258 237 YLDFIDRINYDGTDRKTI-RK---GFPVQNLYDITVFEN-NLFVTSWRN---------------QSIIRVNKFNSDDYET 296 (440)
Q Consensus 237 ~~~~i~~~~~dG~~~~~i-~~---~~~~~~p~gl~~~~~-~ly~td~~~---------------~~i~~~~~~~g~~~~~ 296 (440)
.. .|.+++.+| ....+ .. +.....|.+++++.+ .+|+++... +.|++++.. ++...+
T Consensus 91 ~~-~l~~~d~~g-~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 91 RL-GLLVVQTDG-TFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp TT-EEEEEETTS-CEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CC-CEEEEeCCC-CEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 43 799999884 44433 22 112356899999865 899998765 689999875 544444
Q ss_pred EecCCCCeEEEEeccCCCCCCCCCce-eEEeecCCccEEEEEEcCCCCCCc--eeeeeecCC--CCceEEEEEcCCCEEE
Q psy14258 297 IANFSRPFAIHIYHRQKQPDALKPST-FLLYAKGKPAIIKGLTFKRDGTTE--QAIMPITDL--KRPSVIDYHEKEEYIY 371 (440)
Q Consensus 297 ~~~~~~p~~~~v~~~~~qp~~~~~~~-~l~~~~~~~~~I~~i~~~~~~~~~--~~~~~~~~~--~~p~~l~~d~~~~~vy 371 (440)
......|.++.+..- . .+++ .|++++...+.|.+++++..+... .....+... ..|.++++|+. +.+|
T Consensus 168 ~~~~~~~~~i~~~~~-~-----d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~-G~l~ 240 (314)
T 1pjx_A 168 DTAFQFPNGIAVRHM-N-----DGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED-NNLL 240 (314)
T ss_dssp EEEESSEEEEEEEEC-T-----TSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT-CCEE
T ss_pred ccCCCCcceEEEecc-c-----CCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC-CCEE
Confidence 445556777765411 0 1343 788988767899999876321111 111122221 46899999986 5699
Q ss_pred EEECCCCeEEEEecC-CCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 372 YAELTSYVIERRKMF-GRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 372 ~~d~~~~~I~r~~~~-g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+++...+.|.+++++ |.....+ ......|.+++++..++.||+++...+.|.+++++.
T Consensus 241 v~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 241 VANWGSSHIEVFGPDGGQPKMRI-RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEETTTEEEEECTTCBSCSEEE-ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCEEEEEcCCCCcEeEEE-eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 999888999999998 6544443 334478999999987767999998888999999874
No 57
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.64 E-value=9.5e-13 Score=125.05 Aligned_cols=277 Identities=13% Similarity=0.067 Sum_probs=188.4
Q ss_pred eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc-eeEEe
Q psy14258 139 RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER-FPMVT 213 (440)
Q Consensus 139 avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~-~~l~~ 213 (440)
.++...+.+|++ +.|.+.+++.......+......| +++++|...+||++.... .+|.+.+++.... ...+.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~ 80 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFC--QTLVQIETQLEPPKVVAIQ 80 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTT--CEEEEEECSSSSCEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCC--CeEEEEECCCCceeEEecc
Confidence 345567778888 789999988655544445556667 999999767799999865 5999999976554 22222
Q ss_pred cCccCceE-EEEeCCCCEEEEEeCCCC--cEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCe-EEEEe
Q psy14258 214 HKIVYPYG-VTVDFPTKHVYWVDTYLD--FIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQS-IIRVN 287 (440)
Q Consensus 214 ~~~~~P~g-l~vD~~~~~ly~~d~~~~--~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~-i~~~~ 287 (440)
....|.. +++++.+++||..+...+ .|..++++.......... -..|.++++..+ +||.++...+. |...+
T Consensus 81 -~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~ 157 (331)
T 3u4y_A 81 -EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFK 157 (331)
T ss_dssp -ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEE
T ss_pred -cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEE
Confidence 2346777 999999999994433324 899999875544333332 356899998765 79999987677 66555
Q ss_pred ccCCCce-----EEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEE
Q psy14258 288 KFNSDDY-----ETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVI 361 (440)
Q Consensus 288 ~~~g~~~-----~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l 361 (440)
....... ..+.....|.++.+. |+ .+|+++....+.|..+++... ........+.....|.++
T Consensus 158 ~~~~g~~~~~~~~~~~~~~~~~~~~~s----------pdg~~l~v~~~~~~~v~v~d~~~~-~~~~~~~~~~~~~~~~~~ 226 (331)
T 3u4y_A 158 IDADGVLFDTGQEFISGGTRPFNITFT----------PDGNFAFVANLIGNSIGILETQNP-ENITLLNAVGTNNLPGTI 226 (331)
T ss_dssp ECTTCCEEEEEEEEECSSSSEEEEEEC----------TTSSEEEEEETTTTEEEEEECSST-TSCEEEEEEECSSCCCCE
T ss_pred ECCCCcEeecCCccccCCCCccceEEC----------CCCCEEEEEeCCCCeEEEEECCCC-cccceeeeccCCCCCceE
Confidence 4332222 122223346666554 34 468888776789999998755 211112233334678999
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE--ECCC-------CCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCe
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI--DTGI-------YNVEGMAVDWMANNLYWTDAGIGTINVAKISDFS 432 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~--~~~~-------~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~ 432 (440)
++++.++++|+++...+.|...++.....+.+- ..++ ..+.++++.+.++.||.+....+.|.+.++.++.
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 999999999999988889999998754332221 1121 1234589999999999999999999999998843
No 58
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.64 E-value=1.6e-13 Score=129.78 Aligned_cols=244 Identities=11% Similarity=0.065 Sum_probs=173.5
Q ss_pred CCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCC
Q psy14258 159 YMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL 238 (440)
Q Consensus 159 dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~ 238 (440)
.+...+.+. .+...+.|.+.+|..+.|||++... .+|.+.+.+|.. ..+......|+++++|+ .++||+++...
T Consensus 33 ~~~~~~~l~-~~~~~~egp~~~~~g~~l~~~d~~~--~~i~~~~~~g~~--~~~~~~~~~~~gl~~d~-dG~l~v~~~~~ 106 (305)
T 3dr2_A 33 GDARLLTLY-DQATWSEGPAWWEAQRTLVWSDLVG--RRVLGWREDGTV--DVLLDATAFTNGNAVDA-QQRLVHCEHGR 106 (305)
T ss_dssp TTCCCEEEE-CCCSSEEEEEEEGGGTEEEEEETTT--TEEEEEETTSCE--EEEEESCSCEEEEEECT-TSCEEEEETTT
T ss_pred CCCceEEEe-cCCcCccCCeEeCCCCEEEEEECCC--CEEEEEeCCCCE--EEEeCCCCccceeeECC-CCCEEEEECCC
Confidence 344444443 4778899999999766799999876 599999997753 23334456799999995 56799999888
Q ss_pred CcEEEEEccCCCcEEEec---CCccCceeeeeEecC-EEEEEec-----------------CCCeEEEEeccCCCceEEE
Q psy14258 239 DFIDRINYDGTDRKTIRK---GFPVQNLYDITVFEN-NLFVTSW-----------------RNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 239 ~~i~~~~~dG~~~~~i~~---~~~~~~p~gl~~~~~-~ly~td~-----------------~~~~i~~~~~~~g~~~~~~ 297 (440)
+.|.+++.+|. .+.+.. +..+..|.+++++.+ .+|+||. ..+.|++++..+|+...+.
T Consensus 107 ~~v~~~~~~g~-~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 185 (305)
T 3dr2_A 107 RAITRSDADGQ-AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA 185 (305)
T ss_dssp TEEEEECTTSC-EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE
T ss_pred CEEEEECCCCC-EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe
Confidence 89999999865 343332 223457889999865 9999874 1367999998777666555
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCc-----cEEEEEEcCCCCCCceeeeee-cCCCCceEEEEEcCCCEE
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKP-----AIIKGLTFKRDGTTEQAIMPI-TDLKRPSVIDYHEKEEYI 370 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~-----~~I~~i~~~~~~~~~~~~~~~-~~~~~p~~l~~d~~~~~v 370 (440)
.+..|.++.+. |+ ..||+++... +.|+++++++.+ ........ .....|.++++|+.++ |
T Consensus 186 -~~~~p~gl~~s----------pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~-l 252 (305)
T 3dr2_A 186 -DLDHPNGLAFS----------PDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW-L 252 (305)
T ss_dssp -EESSEEEEEEC----------TTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC-E
T ss_pred -cCCCCcceEEc----------CCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC-E
Confidence 66678888765 34 4688988753 689999887652 11111111 1234688999998766 8
Q ss_pred EEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 371 YYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 371 y~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
|+++ .+.|++++++|.....+... ..|..++++..++.||++.. +.+.++++
T Consensus 253 wv~~--~~gv~~~~~~g~~~~~~~~~--~~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 253 WSSS--GTGVCVFDSDGQLLGHIPTP--GTASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp EECC--SSEEEEECTTSCEEEEEECS--SCCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred EEec--CCcEEEECCCCCEEEEEECC--CceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 7776 45699999988655554332 26999999877788999975 46766654
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.62 E-value=1.8e-12 Score=124.30 Aligned_cols=248 Identities=11% Similarity=0.069 Sum_probs=168.4
Q ss_pred CCCCceEEEEcCCCCeEEEEEcC-CCCCcEEEEeCCCCCceeEEe--cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEc
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWG-ATRPMLERSLLDGTERFPMVT--HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINY 246 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~-~~~~~I~r~~~dG~~~~~l~~--~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~ 246 (440)
....|.+++++| .|.||.++.. .+ ..|...++++...+.+.. .....|.++++++.+++||+++...+.|...++
T Consensus 38 ~~~~p~~~a~sp-dg~l~~~~~~~~~-~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 38 ATQNPTYLALSA-KDCLYSVDKEDDE-GGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp ECSCCCCEEECT-TCEEEEEEEETTE-EEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccCCcceEEEcc-CCeEEEEEecCCC-ceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 457899999999 5669999863 22 588888886654333322 235679999999999999999987788888887
Q ss_pred cC-CCcEEEec----CC------ccCceeeeeEecC-EEEEEecCCCeEEEEecc-CCCceEEE--e--cCCCCeEEEEe
Q psy14258 247 DG-TDRKTIRK----GF------PVQNLYDITVFEN-NLFVTSWRNQSIIRVNKF-NSDDYETI--A--NFSRPFAIHIY 309 (440)
Q Consensus 247 dG-~~~~~i~~----~~------~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~-~g~~~~~~--~--~~~~p~~~~v~ 309 (440)
+. .....+.. +. ...+|.++++..+ .+|+++...+.|..++.. +|+..... . ....|.++.+.
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~s 195 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFS 195 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEEC
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEEC
Confidence 42 22332221 10 1235778888754 699999988888887766 34322211 1 12246666544
Q ss_pred ccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCc-eeeeeecCC-------CCceEEEEEcCCCEEEEEECCCCeE
Q psy14258 310 HRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTE-QAIMPITDL-------KRPSVIDYHEKEEYIYYAELTSYVI 380 (440)
Q Consensus 310 ~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~-~~~~~~~~~-------~~p~~l~~d~~~~~vy~~d~~~~~I 380 (440)
|+ .+|++++...+.|..++++.. ... .....+... ..|.++++++.+++||+++...+.|
T Consensus 196 ----------pdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v 264 (347)
T 3hfq_A 196 ----------PDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTL 264 (347)
T ss_dssp ----------TTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEE
T ss_pred ----------CCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEE
Confidence 34 468888776688888887753 111 111111111 3478999999999999999888988
Q ss_pred EEEecCCC-CeEEE--EECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 381 ERRKMFGR-GKEVV--IDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 381 ~r~~~~g~-~~~~~--~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
...+++.. ..+.+ +..+-..|.+|++++.++.||.++...++|.+++++.
T Consensus 265 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 265 AVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeC
Confidence 88887632 22222 2233357999999999999999999989999997764
No 60
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.61 E-value=2.2e-12 Score=122.85 Aligned_cols=246 Identities=11% Similarity=0.010 Sum_probs=172.4
Q ss_pred CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCC----CcEEEE
Q psy14258 169 LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL----DFIDRI 244 (440)
Q Consensus 169 ~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~----~~i~~~ 244 (440)
.....|.++++|+ .|.|||++... +.|.+.++++...+.+.......|.+|++|+ .++||+++... +.|.++
T Consensus 42 ~~~~~~~~~~~~~-~g~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~ 117 (333)
T 2dg1_A 42 KKGLQLEGLNFDR-QGQLFLLDVFE--GNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAA 117 (333)
T ss_dssp SSCCCEEEEEECT-TSCEEEEETTT--CEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEE
T ss_pred ccCccccCcEECC-CCCEEEEECCC--CEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEE
Confidence 3556799999998 68899998765 5899999987665555433446799999994 56899998766 689999
Q ss_pred EccCCCcEEEec-CCccCceeeeeEecC-EEEEEecC------CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCC
Q psy14258 245 NYDGTDRKTIRK-GFPVQNLYDITVFEN-NLFVTSWR------NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPD 316 (440)
Q Consensus 245 ~~dG~~~~~i~~-~~~~~~p~gl~~~~~-~ly~td~~------~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~ 316 (440)
+.++.....+.. ......|.+++++.+ .+|+++.. .+.|++++..+++...+......|.++.+.
T Consensus 118 d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~------- 190 (333)
T 2dg1_A 118 TENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALS------- 190 (333)
T ss_dssp CTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEEC-------
T ss_pred eCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEEC-------
Confidence 998877664433 212457899999855 89999874 478999987655444444444457777655
Q ss_pred CCCCc-eeEEeecCCccEEEEEEcCCCCCC-ce----eeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCe
Q psy14258 317 ALKPS-TFLLYAKGKPAIIKGLTFKRDGTT-EQ----AIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGK 390 (440)
Q Consensus 317 ~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~-~~----~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~ 390 (440)
|+ .+|++++...+.|++++++..+.. .. ......+...|.++++|+.+ .+|+++...+.|++++++|...
T Consensus 191 ---~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~g~~~ 266 (333)
T 2dg1_A 191 ---TDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDD-NLYVAMYGQGRVLVFNKRGYPI 266 (333)
T ss_dssp ---TTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTC-CEEEEEETTTEEEEECTTSCEE
T ss_pred ---CCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCC-CEEEEEcCCCEEEEECCCCCEE
Confidence 34 468888776689999998543111 10 11112222468899999875 5999988889999999987544
Q ss_pred EEEEECCCC------CeeeEEEecCCCcEEEEeCC-----CCeEEEEEeCC
Q psy14258 391 EVVIDTGIY------NVEGMAVDWMANNLYWTDAG-----IGTINVAKISD 430 (440)
Q Consensus 391 ~~~~~~~~~------~~~glAvD~~~~~lYwtd~~-----~~~I~~~~~~g 430 (440)
..+.. ... .|.+++++..++.||++... .+.|..+++..
T Consensus 267 ~~~~~-~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 267 GQILI-PGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp EEEEC-TTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred EEEEc-CCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEeccc
Confidence 44432 222 68999998777899998764 24677777654
No 61
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.60 E-value=1.7e-11 Score=120.95 Aligned_cols=276 Identities=11% Similarity=0.019 Sum_probs=197.1
Q ss_pred cccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEc-----CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC
Q psy14258 134 LDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAID-----LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~-----~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~ 203 (440)
..|.+ ++++ ++.+|++ +.|.+.+++......... .....+.++++.+ .|.+|++.... +.|...++
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d--~~v~~~d~ 198 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQA--NAVHVFDL 198 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGG--TEEEEEET
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCC--CEEEEEEC
Confidence 45778 8888 7778888 569999988655443322 2234577899977 68888888665 58999998
Q ss_pred CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEec---
Q psy14258 204 DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSW--- 278 (440)
Q Consensus 204 dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~--- 278 (440)
+.......+......|.++++++.+.+||++....+.|...++........... ...|.++++..+ .||.+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~ 276 (433)
T 3bws_A 199 KTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSAS 276 (433)
T ss_dssp TTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESC
T ss_pred CCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCC
Confidence 765544444444567999999999999999998888999999865443332222 345888888643 7888775
Q ss_pred ----CCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeec
Q psy14258 279 ----RNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT 353 (440)
Q Consensus 279 ----~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~ 353 (440)
.++.|...+..+++....+.....|.++.+. |+ .+|+++....+.|..++++.. .....+.
T Consensus 277 ~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~g~~l~~~~~~~~~v~v~d~~~~----~~~~~~~ 342 (433)
T 3bws_A 277 NQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSG----------NTENKIYVSDMCCSKIEVYDLKEK----KVQKSIP 342 (433)
T ss_dssp TTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEEC----------SSTTEEEEEETTTTEEEEEETTTT----EEEEEEE
T ss_pred ccccCCCeEEEEECCCCcEEeeccCCCCcceEEEC----------CCCCEEEEEecCCCEEEEEECCCC----cEEEEec
Confidence 3567888887776555444322245555443 33 468887666789999998755 2333334
Q ss_pred CCCCceEEEEEcCCCEEEEEECCC--------------CeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCC
Q psy14258 354 DLKRPSVIDYHEKEEYIYYAELTS--------------YVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 354 ~~~~p~~l~~d~~~~~vy~~d~~~--------------~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
....|.++++++.++.+|++.... +.|+..++........+. .-..|.++++++.++.||.+...
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 421 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWE-AGNQPTGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSCEEEEEETT
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEec-CCCCCceEEEcCCCCEEEEEECC
Confidence 445788999999999999998653 489999987544333344 34679999999999999999887
Q ss_pred CCeEEEEEeCC
Q psy14258 420 IGTINVAKISD 430 (440)
Q Consensus 420 ~~~I~~~~~~g 430 (440)
.++|.+.++++
T Consensus 422 d~~i~v~~~~~ 432 (433)
T 3bws_A 422 DHQIRVYRRDG 432 (433)
T ss_dssp TTEEEEEEETT
T ss_pred CCeEEEEEecC
Confidence 89999999886
No 62
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.60 E-value=2e-11 Score=118.64 Aligned_cols=271 Identities=15% Similarity=0.116 Sum_probs=196.2
Q ss_pred cEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceE
Q psy14258 146 KIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYG 221 (440)
Q Consensus 146 ~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~g 221 (440)
.+|++ +.|.+.+++.......+.. -..|.+++++|...+||++.... +.|...++........+.. -..|.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d--~~i~v~d~~~~~~~~~~~~-~~~v~~ 78 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHS--NDVSIIDTATNNVIATVPA-GSSPQG 78 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEEGGG--TEEEEEETTTTEEEEEEEC-SSSEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeec-CCCcceEEECCCCCEEEEECCCC--CeEEEEECCCCeEEEEEEC-CCCccc
Confidence 46666 6788888876555444442 24699999999777899987554 5899999864433333332 237899
Q ss_pred EEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEec
Q psy14258 222 VTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIAN 299 (440)
Q Consensus 222 l~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~ 299 (440)
+++++.+.+||++....+.|...++........... -..|.++++..+ .||++....+.|...+..+++....+..
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 156 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSV 156 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEec
Confidence 999999999999988888999999876554433332 346788888754 7999998899999999877766655554
Q ss_pred CCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEEC--C
Q psy14258 300 FSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAEL--T 376 (440)
Q Consensus 300 ~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~--~ 376 (440)
...|..+.+. |+ .+|+++....+.|+.+++... .....+.....+.++++++.++++|+++. .
T Consensus 157 ~~~~~~~~~~----------~dg~~l~~~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 222 (391)
T 1l0q_A 157 GRSPKGIAVT----------PDGTKVYVANFDSMSISVIDTVTN----SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKY 222 (391)
T ss_dssp CSSEEEEEEC----------TTSSEEEEEETTTTEEEEEETTTT----EEEEEEECSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CCCcceEEEC----------CCCCEEEEEeCCCCEEEEEECCCC----eEEEEEecCCCccceEECCCCCEEEEEecCcC
Confidence 4456666544 23 467777666688999988665 22233333446789999999999999986 6
Q ss_pred CCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCeeeEEe
Q psy14258 377 SYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDFSIRKVL 437 (440)
Q Consensus 377 ~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~~l 437 (440)
.+.|+..++........+..+ ..|.++++++.++.||++....++|.+.++...+..+.+
T Consensus 223 ~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 223 FNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp CCEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCcEEEEECCCCeEEEEEecC-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 889999998765444444433 568999999989899999888899999998753444443
No 63
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.60 E-value=1.3e-13 Score=132.77 Aligned_cols=245 Identities=12% Similarity=0.117 Sum_probs=157.9
Q ss_pred CCceEEEEcCCCCeEEEEEcCC-C-CCcEEEEeCCCCCceeE------EecCccCceEEEEeCCCCEEEEEeCC-----C
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGA-T-RPMLERSLLDGTERFPM------VTHKIVYPYGVTVDFPTKHVYWVDTY-----L 238 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~-~-~~~I~r~~~dG~~~~~l------~~~~~~~P~gl~vD~~~~~ly~~d~~-----~ 238 (440)
..|.+|++++ .|++|.+.... . ..+|.+.+ +|... .+ ....+..|.|+++|+ .++|||+|.. .
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSC
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCC
Confidence 6899999998 68999996321 1 13788887 65321 00 012367899999994 4899999987 5
Q ss_pred CcEEEEEccCCC-cEEEecC----CccCceeeeeEe--cCEEEEEec---CCCeEEEEeccCCCceEEEec--CCCC--e
Q psy14258 239 DFIDRINYDGTD-RKTIRKG----FPVQNLYDITVF--ENNLFVTSW---RNQSIIRVNKFNSDDYETIAN--FSRP--F 304 (440)
Q Consensus 239 ~~i~~~~~dG~~-~~~i~~~----~~~~~p~gl~~~--~~~ly~td~---~~~~i~~~~~~~g~~~~~~~~--~~~p--~ 304 (440)
.+|..+++.... .+.+... ....+|.+++++ ++.+|++|. ..+.|..++..+++...++.. ...| .
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 799999987443 3444321 112467999998 469999998 788999999877765544422 1011 1
Q ss_pred EEE-----Ee--ccCC-------CCCCC--CCc-eeEEeecCCccEEEEEEcCCC--CC-Cc-ee---eeeecCCCCceE
Q psy14258 305 AIH-----IY--HRQK-------QPDAL--KPS-TFLLYAKGKPAIIKGLTFKRD--GT-TE-QA---IMPITDLKRPSV 360 (440)
Q Consensus 305 ~~~-----v~--~~~~-------qp~~~--~~~-~~l~~~~~~~~~I~~i~~~~~--~~-~~-~~---~~~~~~~~~p~~ 360 (440)
.+. +. .+.. -|.+. .|+ .+||+++...+++++++.+.. +. .+ +. .........|.|
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 110 00 0000 00000 244 578998876678999886421 01 10 00 011112346889
Q ss_pred EEEEcCCCEEEEEECCCCeEEEEec-CCCCeEEEEEC-CCCCeeeEEEecCCCcEEEEeCCCCeE
Q psy14258 361 IDYHEKEEYIYYAELTSYVIERRKM-FGRGKEVVIDT-GIYNVEGMAVDWMANNLYWTDAGIGTI 423 (440)
Q Consensus 361 l~~d~~~~~vy~~d~~~~~I~r~~~-~g~~~~~~~~~-~~~~~~glAvD~~~~~lYwtd~~~~~I 423 (440)
+++|+. +.||+++...++|.+.+. +|. .+++... .+..|.+||+|. .++||+++...+++
T Consensus 253 ia~d~~-G~l~va~~~~~~V~~~d~~~G~-~~~~~~~~~~~~p~~va~~~-~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 253 ISIDKD-HNIYVGDLAHSAIGVITSADRA-YKLLVTDEKLSWTDSFNFGS-DGYLYFDCNQLHHS 314 (343)
T ss_dssp EEECTT-CCEEEEEGGGTEEEEEETTTTE-EEEEEECGGGSCEEEEEECT-TSCEEEEECCGGGS
T ss_pred EEECCC-CCEEEEccCCCeEEEEECCCCC-EEEEEECCceecCCeeEECC-CCcEEEEeCccccc
Confidence 999986 679999999999999999 774 4445442 367899999997 47899998755544
No 64
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.59 E-value=2.2e-13 Score=131.58 Aligned_cols=247 Identities=12% Similarity=0.049 Sum_probs=167.5
Q ss_pred eeccccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEE------cCCCCCceEEEEcCC---CCeEEEEEcCCC-
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAI------DLNLSKPRGIALDPT---SGYMFFTKWGAT- 194 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~------~~~~~~P~~iavd~~---~g~lywtd~~~~- 194 (440)
+.+++..|.+ |+++.++.||++ ++|.+.+.+|...+.+. ......|.+|+++|. +|+||+++....
T Consensus 13 va~~l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 13 LQDKLDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp EEEEESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECS
T ss_pred EECCCCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCC
Confidence 3467899999 999876659999 79999988886543222 123456899999996 899999975410
Q ss_pred ----CCcEEEEeCCCC-----CceeEEec------CccCceEEEEeCCCCEEEEEeCC-------------CCcEEEEEc
Q psy14258 195 ----RPMLERSLLDGT-----ERFPMVTH------KIVYPYGVTVDFPTKHVYWVDTY-------------LDFIDRINY 246 (440)
Q Consensus 195 ----~~~I~r~~~dG~-----~~~~l~~~------~~~~P~gl~vD~~~~~ly~~d~~-------------~~~i~~~~~ 246 (440)
..+|.|.++++. ..++++.. ....|.+|++++ .++||++... .++|.+++.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEET
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECC
Confidence 148999988754 23344432 234588999996 5699999632 358999999
Q ss_pred cCC-------------CcEEEecCCccCceeeeeEec--CEEEEEecCCC---eEEEEeccCCCc---------------
Q psy14258 247 DGT-------------DRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQ---SIIRVNKFNSDD--------------- 293 (440)
Q Consensus 247 dG~-------------~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~---~i~~~~~~~g~~--------------- 293 (440)
||+ ..++...+ +++|.|++++. +.||++|...+ .|.++.+ |..
T Consensus 172 dG~~p~~npf~~~~~~~~~i~a~G--~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~--G~nyGwp~~~~~~~~~~~ 247 (353)
T 2g8s_A 172 QGEIPDDNPFIKESGVRAEIWSYG--IRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQK--GKNYGWPLATWGINYSGF 247 (353)
T ss_dssp TSCCCTTCTTTTSTTSCTTEEEEC--CSEEEEEEEETTTTEEEEEEECSBSCEEEECCCT--TCBCCTTTBCSSBCTTSS
T ss_pred CCCCCCCCCCcCCCCCCccEEEEc--CcCccceEEECCCCCEEEEecCCCCCcEEeEecc--CCcCCCCCccCCCCCCCC
Confidence 987 44555555 78999999996 59999997643 4444422 110
Q ss_pred -------------e---EEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CC
Q psy14258 294 -------------Y---ETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LK 356 (440)
Q Consensus 294 -------------~---~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~ 356 (440)
. ..+.....|.++.++....-| ..++.|++++...++|.++.+++. ........+.. ..
T Consensus 248 ~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp---~~~g~l~v~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~ 323 (353)
T 2g8s_A 248 KIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFP---QWQQKLFIGALKDKDVIVMSVNGD-KVTEDGRILTDRGQ 323 (353)
T ss_dssp CCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSG---GGTTEEEEEETTTTEEEEEEEETT-EEEEEEEESGGGCC
T ss_pred ccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCc---ccCCcEEEEEccCCEEEEEEeCCC-eEeeeEEcccCCCC
Confidence 0 011112246777777544333 124778999988899999999854 11111112222 35
Q ss_pred CceEEEEEcCCCEEEEE-ECCCCeEEEEec
Q psy14258 357 RPSVIDYHEKEEYIYYA-ELTSYVIERRKM 385 (440)
Q Consensus 357 ~p~~l~~d~~~~~vy~~-d~~~~~I~r~~~ 385 (440)
+|.++++++++ .||++ |...++|+|+..
T Consensus 324 rp~~v~~~pdG-~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 324 RIRDVRTGPDG-YLYVLTDESSGELLKVSP 352 (353)
T ss_dssp CEEEEEECTTS-CEEEEECSTTEEEEEEEC
T ss_pred ceeEEEECCCC-cEEEEEeCCCCEEEEEeC
Confidence 89999999965 59996 667899999864
No 65
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=1.1e-12 Score=123.02 Aligned_cols=198 Identities=11% Similarity=0.068 Sum_probs=148.5
Q ss_pred EEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEecc
Q psy14258 211 MVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKF 289 (440)
Q Consensus 211 l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~ 289 (440)
.+......|.|+++|+.++.|||++...+.|.+++.++. .+.+... ...|.++++..+ .||+++...+.|.+++..
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~--~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHP--SHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESS--CSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECC--CCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 444567889999999888889999999999999999887 5555433 467999999765 899999888899999987
Q ss_pred CCCceEEEec-----CCCCeEEEEeccCCCCCCCCCceeEEeecC-----------------CccEEEEEEcCCCCCCce
Q psy14258 290 NSDDYETIAN-----FSRPFAIHIYHRQKQPDALKPSTFLLYAKG-----------------KPAIIKGLTFKRDGTTEQ 347 (440)
Q Consensus 290 ~g~~~~~~~~-----~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~-----------------~~~~I~~i~~~~~~~~~~ 347 (440)
+|+...+... ...|.++.+. +++.|++++. ..+.|++++.++.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d----------~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~----- 163 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLA----------PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT----- 163 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEEC----------TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-----
T ss_pred CCcEEEEeeccCCCCCCCCCCEEEC----------CCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-----
Confidence 7765443321 2245566554 4667888643 1257888887643
Q ss_pred eeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC--CCC---eEEEEECCCCCeeeEEEecCCCcEEEEeCCCCe
Q psy14258 348 AIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF--GRG---KEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGT 422 (440)
Q Consensus 348 ~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~--g~~---~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~ 422 (440)
.......+..|.++++++.++.+ |++...+.|++.+++ |.- ..++ ......|.||++|.. ++||+++ .+.
T Consensus 164 ~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~-G~l~v~~--~~~ 238 (296)
T 3e5z_A 164 LSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAG-GLIWASA--GDG 238 (296)
T ss_dssp EEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTT-SCEEEEE--TTE
T ss_pred EEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCC-CCEEEEc--CCe
Confidence 23334566789999999988877 999999999999986 322 2344 445568999999974 5799998 678
Q ss_pred EEEEEeCCC
Q psy14258 423 INVAKISDF 431 (440)
Q Consensus 423 I~~~~~~g~ 431 (440)
|.+++++|+
T Consensus 239 v~~~~~~g~ 247 (296)
T 3e5z_A 239 VHVLTPDGD 247 (296)
T ss_dssp EEEECTTSC
T ss_pred EEEECCCCC
Confidence 999999984
No 66
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.58 E-value=9e-12 Score=118.25 Aligned_cols=275 Identities=10% Similarity=0.053 Sum_probs=185.9
Q ss_pred eeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCce
Q psy14258 88 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEH 162 (440)
Q Consensus 88 ~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~ 162 (440)
|+...+++|+++...+.|...++....... .+..+...| + ++++.++.||++ ++|.+.++++..
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~----------~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~ 73 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILN----------QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP 73 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEE----------EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceee----------eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 556678899999988888877765433211 122345567 9 999999989998 589999997655
Q ss_pred E-EEEEcCCCCCceE-EEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCc
Q psy14258 163 C-MIAIDLNLSKPRG-IALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDF 240 (440)
Q Consensus 163 ~-~~~~~~~~~~P~~-iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~ 240 (440)
. ...+. ....|.. ++++|...+||.+......+.|...+++.......+.. ...|.++++++.+++||+++...+.
T Consensus 74 ~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~ 151 (331)
T 3u4y_A 74 PKVVAIQ-EGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSAN 151 (331)
T ss_dssp CEEEEEE-ECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTT
T ss_pred eeEEecc-cCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecCCCc
Confidence 3 32222 2356888 99999777788333321112899999876544333332 3568999999988899999988777
Q ss_pred -EEEEEccCCCcE-----EEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCc---eEEEecCCCCeEEEEe
Q psy14258 241 -IDRINYDGTDRK-----TIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDD---YETIANFSRPFAIHIY 309 (440)
Q Consensus 241 -i~~~~~dG~~~~-----~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~---~~~~~~~~~p~~~~v~ 309 (440)
|...+++..... ..... ...|.++++..+ .+|++....+.|..++..+++. ...+.....|.++.+.
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~s 229 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISG--GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVS 229 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECS--SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEEC
T ss_pred eEEEEEECCCCcEeecCCccccC--CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEEC
Confidence 777776532221 11121 346899998755 7999999899999999888877 4444444566676654
Q ss_pred ccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceee-eeec--CCCC----ceEEEEEcCCCEEEEEECCCCeEE
Q psy14258 310 HRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAI-MPIT--DLKR----PSVIDYHEKEEYIYYAELTSYVIE 381 (440)
Q Consensus 310 ~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~-~~~~--~~~~----p~~l~~d~~~~~vy~~d~~~~~I~ 381 (440)
|+ .+|+++....+.|..+++... ...... .+.. .... ..++++++.+++||+++...+.|.
T Consensus 230 ----------pdg~~l~v~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~ 298 (331)
T 3u4y_A 230 ----------RDGSTVYVLTESTVDVFNFNQLSG-TLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELK 298 (331)
T ss_dssp ----------TTSSEEEEECSSEEEEEEEETTTT-EEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEE
T ss_pred ----------CCCCEEEEEEcCCCEEEEEECCCC-ceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEE
Confidence 34 568888776678888887654 110010 1111 0011 235899999999999999899999
Q ss_pred EEecCCC
Q psy14258 382 RRKMFGR 388 (440)
Q Consensus 382 r~~~~g~ 388 (440)
..++.+.
T Consensus 299 v~d~~~~ 305 (331)
T 3u4y_A 299 VFTISGK 305 (331)
T ss_dssp EEETTSC
T ss_pred EEEecCC
Confidence 9999864
No 67
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=2.1e-11 Score=115.72 Aligned_cols=272 Identities=10% Similarity=0.051 Sum_probs=180.9
Q ss_pred CcEEEe----ceEEEEecC--CceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC--CCCceeEEe-cC
Q psy14258 145 HKIVYP----EAIYFCTHY--MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD--GTERFPMVT-HK 215 (440)
Q Consensus 145 ~~lY~~----~~I~~~~~d--g~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d--G~~~~~l~~-~~ 215 (440)
+.+|++ +.|.+.+++ |.............|.+++++|...+||++.... +.|...+++ +...+.+.. ..
T Consensus 5 ~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 5 QTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTCCEEEEEEEEC
T ss_pred EEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCCceeecccccc
Confidence 456766 678888876 4333222122446899999999777899998764 478887776 333332221 11
Q ss_pred ccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccC-C
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFN-S 291 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~-g 291 (440)
...|.++++++.+..||++....+.|...+++ |...+.+..-.....|.++++..+ .||+++...+.|..++..+ +
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 162 (343)
T 1ri6_A 83 PGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG 162 (343)
T ss_dssp SSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTS
T ss_pred CCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCC
Confidence 23799999999999999999878888888874 322222222111456888888754 8999997788888888765 4
Q ss_pred CceEEE----e--cCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCC-CCCcee-eee-ec----CCCC
Q psy14258 292 DDYETI----A--NFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRD-GTTEQA-IMP-IT----DLKR 357 (440)
Q Consensus 292 ~~~~~~----~--~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~-~~~~~~-~~~-~~----~~~~ 357 (440)
+...+. . ....|.++.+. |+ .+|+++....+.|..++++.. +..... ... +. +...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~----------pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 232 (343)
T 1ri6_A 163 HLVAQDPAEVTTVEGAGPRHMVFH----------PNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRW 232 (343)
T ss_dssp CEEEEEEEEEECSTTCCEEEEEEC----------TTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCC
T ss_pred ceeeecccccccCCCCCcceEEEC----------CCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCC
Confidence 332211 1 12245565543 33 568888766688999998653 111101 111 11 1235
Q ss_pred ceEEEEEcCCCEEEEEECCCCeEEEEecC--CCCeEEE--EECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 358 PSVIDYHEKEEYIYYAELTSYVIERRKMF--GRGKEVV--IDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 358 p~~l~~d~~~~~vy~~d~~~~~I~r~~~~--g~~~~~~--~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
|.++++++.++.+|+++...+.|...+++ +...+.+ +..+ ..|.++++++.++.||.++...+.|.+.+++
T Consensus 233 ~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 233 AADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCC-CccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 66899999999999999888999999887 3333332 2223 4499999999999999999888999999776
No 68
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=4.3e-12 Score=119.83 Aligned_cols=228 Identities=11% Similarity=0.098 Sum_probs=161.4
Q ss_pred eeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~ 203 (440)
+..+...+++ +.++.++.|||+ ++|.+.+.+|... ++ ......|.++++|+ .|.||+++.+. .+|.+.+.
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~-~~-~~~~~~~~gl~~d~-dG~l~v~~~~~--~~v~~~~~ 114 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVD-VL-LDATAFTNGNAVDA-QQRLVHCEHGR--RAITRSDA 114 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEE-EE-EESCSCEEEEEECT-TSCEEEEETTT--TEEEEECT
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEE-EE-eCCCCccceeeECC-CCCEEEEECCC--CEEEEECC
Confidence 4567788999 999998889999 7899999987643 33 22446799999999 68899999775 48999999
Q ss_pred CCCCceeEEec----CccCceEEEEeCCCCEEEEEeCC-----------------CCcEEEEEccCCCcEEEecCCccCc
Q psy14258 204 DGTERFPMVTH----KIVYPYGVTVDFPTKHVYWVDTY-----------------LDFIDRINYDGTDRKTIRKGFPVQN 262 (440)
Q Consensus 204 dG~~~~~l~~~----~~~~P~gl~vD~~~~~ly~~d~~-----------------~~~i~~~~~dG~~~~~i~~~~~~~~ 262 (440)
+|+. +.+... .+..|+.+++| ..++||++|.. .+.|.+++.++...+.+. + +..
T Consensus 115 ~g~~-~~~~~~~~~~~~~~~~~i~~d-~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~--~~~ 189 (305)
T 3dr2_A 115 DGQA-HLLVGRYAGKRLNSPNDLIVA-RDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D--LDH 189 (305)
T ss_dssp TSCE-EEEECEETTEECSCCCCEEEC-TTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E--ESS
T ss_pred CCCE-EEEEeccCCCccCCCCCEEEC-CCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c--CCC
Confidence 9763 333321 24568999999 56789998741 357888888655555554 3 778
Q ss_pred eeeeeEecC--EEEEEecCC-----CeEEEEeccCCCc--eEEEec--CCCCeEEEEeccCCCCCCCCCceeEEeecCCc
Q psy14258 263 LYDITVFEN--NLFVTSWRN-----QSIIRVNKFNSDD--YETIAN--FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKP 331 (440)
Q Consensus 263 p~gl~~~~~--~ly~td~~~-----~~i~~~~~~~g~~--~~~~~~--~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~ 331 (440)
|.|+++..+ .||+++... +.|++++...+.. ..++.. ...|.++.+. +++.|+++..
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d----------~~G~lwv~~~-- 257 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD----------RGGWLWSSSG-- 257 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC----------TTSCEEECCS--
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC----------CCCCEEEecC--
Confidence 999999755 799999863 7898888754431 112221 2246666655 4667888875
Q ss_pred cEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 332 AIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 332 ~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
+.|.+++.++. .. ..+... ..|..++|++.++.||++.. +.++++++
T Consensus 258 ~gv~~~~~~g~-~~--~~~~~~--~~~~~~~f~~d~~~L~it~~--~~l~~~~~ 304 (305)
T 3dr2_A 258 TGVCVFDSDGQ-LL--GHIPTP--GTASNCTFDQAQQRLFITGG--PCLWMLPL 304 (305)
T ss_dssp SEEEEECTTSC-EE--EEEECS--SCCCEEEECTTSCEEEEEET--TEEEEEEC
T ss_pred CcEEEECCCCC-EE--EEEECC--CceeEEEEeCCCCEEEEEcC--CeEEEEEC
Confidence 67988888765 11 122222 25889999988889999864 68888764
No 69
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.55 E-value=6.3e-12 Score=118.39 Aligned_cols=237 Identities=11% Similarity=0.051 Sum_probs=164.1
Q ss_pred eeccccccce-eeeecCCcEEEe-----------ceEEEEecCCceEEEEEc----CCCCCceEEEEcCCCCeEEEEEcC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP-----------EAIYFCTHYMEHCMIAID----LNLSKPRGIALDPTSGYMFFTKWG 192 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~-----------~~I~~~~~dg~~~~~~~~----~~~~~P~~iavd~~~g~lywtd~~ 192 (440)
+..++..|++ ++|. .++|||+ +.|.+.++++...+.+.. .....|.+|++|+..|.||+++..
T Consensus 13 ~~~~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~ 91 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91 (314)
T ss_dssp EECCCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT
T ss_pred hhccCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC
Confidence 3567889999 9994 4568875 468888865444433322 123679999999955999999975
Q ss_pred CCCCcEEEEeCCCCCceeE-Eec----CccCceEEEEeCCCCEEEEEeCCC---------------CcEEEEEccCCCcE
Q psy14258 193 ATRPMLERSLLDGTERFPM-VTH----KIVYPYGVTVDFPTKHVYWVDTYL---------------DFIDRINYDGTDRK 252 (440)
Q Consensus 193 ~~~~~I~r~~~dG~~~~~l-~~~----~~~~P~gl~vD~~~~~ly~~d~~~---------------~~i~~~~~dG~~~~ 252 (440)
..|.+.+.+|.. ..+ ... ....|+++++|+ .++||+++... +.|.+++.+|. ..
T Consensus 92 ---~~l~~~d~~g~~-~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~ 165 (314)
T 1pjx_A 92 ---LGLLVVQTDGTF-EEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQ-MI 165 (314)
T ss_dssp ---TEEEEEETTSCE-EECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSC-EE
T ss_pred ---CCEEEEeCCCCE-EEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCCCC-EE
Confidence 389999998543 222 211 234699999995 67899998764 57888888754 33
Q ss_pred EEecCCccCceeeeeEe----cC--EEEEEecCCCeEEEEecc-CCCce--EEEecC-----CCCeEEEEeccCCCCCCC
Q psy14258 253 TIRKGFPVQNLYDITVF----EN--NLFVTSWRNQSIIRVNKF-NSDDY--ETIANF-----SRPFAIHIYHRQKQPDAL 318 (440)
Q Consensus 253 ~i~~~~~~~~p~gl~~~----~~--~ly~td~~~~~i~~~~~~-~g~~~--~~~~~~-----~~p~~~~v~~~~~qp~~~ 318 (440)
.+... +..|.++++. .+ .||+++..++.|++++.. +++.. ..+... ..|.++.+.
T Consensus 166 ~~~~~--~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d--------- 234 (314)
T 1pjx_A 166 QVDTA--FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD--------- 234 (314)
T ss_dssp EEEEE--ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB---------
T ss_pred EeccC--CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC---------
Confidence 33332 5679999988 55 799999888999998865 33321 122221 346666555
Q ss_pred CCceeEEeecCCccEEEEEEcC-CCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 319 KPSTFLLYAKGKPAIIKGLTFK-RDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 319 ~~~~~l~~~~~~~~~I~~i~~~-~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
+++.|++++...+.|.+++.+ +. ... .+.. ....|.++++++.++.||+++...+.|++++++..
T Consensus 235 -~~G~l~v~~~~~~~i~~~d~~~g~-~~~--~~~~-~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 235 -EDNNLLVANWGSSHIEVFGPDGGQ-PKM--RIRC-PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp -TTCCEEEEEETTTEEEEECTTCBS-CSE--EEEC-SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred -CCCCEEEEEcCCCEEEEEcCCCCc-EeE--EEeC-CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 457788887656899999887 43 211 1222 23578999999988889999988889999998753
No 70
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.54 E-value=1.8e-12 Score=125.21 Aligned_cols=253 Identities=13% Similarity=0.096 Sum_probs=165.9
Q ss_pred CceEEEEEcCCCCCceEEEEcCCCCe-EEEEEcCCCCCcEEEEeCCCCCceeEE------ecCccCceEEEEeCC---CC
Q psy14258 160 MEHCMIAIDLNLSKPRGIALDPTSGY-MFFTKWGATRPMLERSLLDGTERFPMV------THKIVYPYGVTVDFP---TK 229 (440)
Q Consensus 160 g~~~~~~~~~~~~~P~~iavd~~~g~-lywtd~~~~~~~I~r~~~dG~~~~~l~------~~~~~~P~gl~vD~~---~~ 229 (440)
|-..+++ ...+..|.+|+++| .|. ||+++.. ++|.+.+.+|...+.+. ......|.||++++. ++
T Consensus 7 g~~~~~v-a~~l~~P~~i~~~p-dG~~l~V~e~~---G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g 81 (353)
T 2g8s_A 7 TVNVEVL-QDKLDHPWALAFLP-DNHGMLITLRG---GELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSR 81 (353)
T ss_dssp CSEEEEE-EEEESSEEEEEECS-TTCCEEEEETT---TEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHC
T ss_pred CcEEEEE-ECCCCCcEEEEEcC-CCCEEEEEeCC---ceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCC
Confidence 3333444 34789999999999 577 9999975 69999998875432221 122446899999986 89
Q ss_pred EEEEEeCC-------CCcEEEEEccCC-----CcEEEecC-----CccCceeeeeEecC-EEEEEecC------------
Q psy14258 230 HVYWVDTY-------LDFIDRINYDGT-----DRKTIRKG-----FPVQNLYDITVFEN-NLFVTSWR------------ 279 (440)
Q Consensus 230 ~ly~~d~~-------~~~i~~~~~dG~-----~~~~i~~~-----~~~~~p~gl~~~~~-~ly~td~~------------ 279 (440)
+||+++.. ..+|.++.+++. ..+++... ...+.|.+|++..| .||++...
T Consensus 82 ~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~ 161 (353)
T 2g8s_A 82 RIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDK 161 (353)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTS
T ss_pred EEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCC
Confidence 99999864 457888888653 34444432 12345788998765 99999643
Q ss_pred -CCeEEEEeccCC------------CceEEE-ecCCCCeEEEEeccCCCCCCCCC-ceeEEeecCCcc---EEEEEEcCC
Q psy14258 280 -NQSIIRVNKFNS------------DDYETI-ANFSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPA---IIKGLTFKR 341 (440)
Q Consensus 280 -~~~i~~~~~~~g------------~~~~~~-~~~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~---~I~~i~~~~ 341 (440)
.++|.|++..+. ...+++ .++.+|.++.+. | .+.|++++.... .|.++...+
T Consensus 162 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d----------~~~g~l~~~d~g~~~~dei~~i~~G~ 231 (353)
T 2g8s_A 162 LQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMN----------PWSNALWLNEHGPRGGDEINIPQKGK 231 (353)
T ss_dssp CTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEE----------TTTTEEEEEEECSBSCEEEECCCTTC
T ss_pred CCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEE----------CCCCCEEEEecCCCCCcEEeEeccCC
Confidence 358999998543 123344 355578898877 3 467888876532 555443222
Q ss_pred C-CC---------------------Cceeeeee---cCCCCceEEEEEcC------CCEEEEEECCCCeEEEEecCCCCe
Q psy14258 342 D-GT---------------------TEQAIMPI---TDLKRPSVIDYHEK------EEYIYYAELTSYVIERRKMFGRGK 390 (440)
Q Consensus 342 ~-~~---------------------~~~~~~~~---~~~~~p~~l~~d~~------~~~vy~~d~~~~~I~r~~~~g~~~ 390 (440)
. +. ......|+ .....|.+++|... .+.+|+++...++|.++.+++...
T Consensus 232 nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~ 311 (353)
T 2g8s_A 232 NYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKV 311 (353)
T ss_dssp BCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEE
T ss_pred cCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeE
Confidence 1 00 00011122 11236889999742 478999999999999999986421
Q ss_pred ---EEEEECCCCCeeeEEEecCCCcEEEE-eCCCCeEEEEEe
Q psy14258 391 ---EVVIDTGIYNVEGMAVDWMANNLYWT-DAGIGTINVAKI 428 (440)
Q Consensus 391 ---~~~~~~~~~~~~glAvD~~~~~lYwt-d~~~~~I~~~~~ 428 (440)
+.++......|.+|++++.+ .||++ |...++|.++..
T Consensus 312 ~~~~~~~~~~~~rp~~v~~~pdG-~lyv~td~~~g~I~ri~~ 352 (353)
T 2g8s_A 312 TEDGRILTDRGQRIRDVRTGPDG-YLYVLTDESSGELLKVSP 352 (353)
T ss_dssp EEEEEESGGGCCCEEEEEECTTS-CEEEEECSTTEEEEEEEC
T ss_pred eeeEEcccCCCCceeEEEECCCC-cEEEEEeCCCCEEEEEeC
Confidence 22222223589999999855 69996 667788887754
No 71
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.53 E-value=6.9e-11 Score=112.14 Aligned_cols=301 Identities=10% Similarity=-0.039 Sum_probs=189.1
Q ss_pred ccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecC--CceEE
Q psy14258 92 EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHY--MEHCM 164 (440)
Q Consensus 92 ~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~d--g~~~~ 164 (440)
.+.+|+++...+.|+...++...... .+........|.+ ++++.++.||++ +.|.+.+++ +...+
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~ 75 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALT--------LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALT 75 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEE--------EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEE--------EeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCcee
Confidence 46788887777888877775321100 0111234457889 999999889998 578887776 43333
Q ss_pred EEEc-CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC-CCCCceeEEe-cCccCceEEEEeCCCCEEEEEeCCCCcE
Q psy14258 165 IAID-LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL-DGTERFPMVT-HKIVYPYGVTVDFPTKHVYWVDTYLDFI 241 (440)
Q Consensus 165 ~~~~-~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~-dG~~~~~l~~-~~~~~P~gl~vD~~~~~ly~~d~~~~~i 241 (440)
.+.. .....|.+++++|...+||++.... +.|...++ +|...+.+.. .....|.++++++.+..||+++...+.|
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v 153 (343)
T 1ri6_A 76 FAAESALPGSLTHISTDHQGQFVFVGSYNA--GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI 153 (343)
T ss_dssp EEEEEECSSCCSEEEECTTSSEEEEEETTT--TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE
T ss_pred eccccccCCCCcEEEEcCCCCEEEEEecCC--CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEE
Confidence 2211 1123899999999877899998754 47777777 3332222221 2345689999999899999999778889
Q ss_pred EEEEccC-CCcEEEe----cCCccCceeeeeEecC--EEEEEecCCCeEEEEecc--CCCceE--EEecCC-------CC
Q psy14258 242 DRINYDG-TDRKTIR----KGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKF--NSDDYE--TIANFS-------RP 303 (440)
Q Consensus 242 ~~~~~dG-~~~~~i~----~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~--~g~~~~--~~~~~~-------~p 303 (440)
...+++. .....+. .......|.++++..+ .+|+++...+.|..++.. +++... .+.... .|
T Consensus 154 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 154 CLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCE
T ss_pred EEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCc
Confidence 9988865 3333221 1111346888888754 799999888888888763 343321 222111 12
Q ss_pred eEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEE
Q psy14258 304 FAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIER 382 (440)
Q Consensus 304 ~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r 382 (440)
.++.+. |+ .+|+++....+.|..++++...........+.....|.++++++.++.||+++...+.|..
T Consensus 234 ~~i~~s----------~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 234 ADIHIT----------PDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp EEEEEC----------TTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred cceEEC----------CCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEE
Confidence 234433 34 4788787666889999887431111222222333358999999999999999877788777
Q ss_pred EecC--CCCeEEEEEC-CCCCeeeEEEecCCCc
Q psy14258 383 RKMF--GRGKEVVIDT-GIYNVEGMAVDWMANN 412 (440)
Q Consensus 383 ~~~~--g~~~~~~~~~-~~~~~~glAvD~~~~~ 412 (440)
.+++ +...+.+... .-..|.+|+++...+.
T Consensus 304 ~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 304 YEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred EEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 6554 3333333221 1267999999875543
No 72
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.53 E-value=1.6e-11 Score=116.90 Aligned_cols=241 Identities=12% Similarity=0.078 Sum_probs=166.0
Q ss_pred eccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC--CCCcEEEEe
Q psy14258 130 ERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA--TRPMLERSL 202 (440)
Q Consensus 130 ~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~--~~~~I~r~~ 202 (440)
......|++ ++|..+ +|||+ +.|.+.++++...+.+.......|.+|++|+ .|.||+++... ....|.+.+
T Consensus 41 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp ESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEEC
T ss_pred eccCccccCcEECCCC-CEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEe
Confidence 345567889 999655 59987 6899999987665555433446799999998 58899998653 013899999
Q ss_pred CCCCCceeEEec--CccCceEEEEeCCCCEEEEEeCC------CCcEEEEEccCCCcEEEecCCccCceeeeeEecC--E
Q psy14258 203 LDGTERFPMVTH--KIVYPYGVTVDFPTKHVYWVDTY------LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--N 272 (440)
Q Consensus 203 ~dG~~~~~l~~~--~~~~P~gl~vD~~~~~ly~~d~~------~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ 272 (440)
.++...+.++.. ....|+++++|+ .+++|+++.. ...|.+++.++.....+... ...|.++++..+ .
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~ 195 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKV 195 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSE
T ss_pred CCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCE
Confidence 988766544432 235799999995 5689998864 46799998877665555443 567999998755 7
Q ss_pred EEEEecCCCeEEEEeccC-CCceEE-----EecC---CCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCC
Q psy14258 273 LFVTSWRNQSIIRVNKFN-SDDYET-----IANF---SRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDG 343 (440)
Q Consensus 273 ly~td~~~~~i~~~~~~~-g~~~~~-----~~~~---~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~ 343 (440)
||+++...+.|++++..+ ++.... .... ..|.++.+. +++.|++++...+.|.+++.++.
T Consensus 196 l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d----------~~G~l~v~~~~~~~v~~~d~~g~- 264 (333)
T 2dg1_A 196 LWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID----------SDDNLYVAMYGQGRVLVFNKRGY- 264 (333)
T ss_dssp EEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB----------TTCCEEEEEETTTEEEEECTTSC-
T ss_pred EEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC----------CCCCEEEEEcCCCEEEEECCCCC-
Confidence 999998888999998753 333221 1111 245566555 45678888765578999987654
Q ss_pred CCceeeeeecC-----CCCceEEEEEcCCCEEEEEECC-----CCeEEEEecCCC
Q psy14258 344 TTEQAIMPITD-----LKRPSVIDYHEKEEYIYYAELT-----SYVIERRKMFGR 388 (440)
Q Consensus 344 ~~~~~~~~~~~-----~~~p~~l~~d~~~~~vy~~d~~-----~~~I~r~~~~g~ 388 (440)
.. ..+.... +..|.++++++.++.||++... .+.|+++++...
T Consensus 265 ~~--~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~~~ 317 (333)
T 2dg1_A 265 PI--GQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGFAK 317 (333)
T ss_dssp EE--EEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECSSC
T ss_pred EE--EEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecccC
Confidence 11 1122221 1258899999877899998764 357888877654
No 73
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.51 E-value=3.3e-11 Score=110.53 Aligned_cols=197 Identities=9% Similarity=0.026 Sum_probs=142.7
Q ss_pred cCceEEEEeCCCCEEEEEeC--CCCcEEEEEccC-CCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCc
Q psy14258 217 VYPYGVTVDFPTKHVYWVDT--YLDFIDRINYDG-TDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDD 293 (440)
Q Consensus 217 ~~P~gl~vD~~~~~ly~~d~--~~~~i~~~~~dG-~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~ 293 (440)
.+|.||++++. ++||.+.. ..+.|..+++.. .-...+..+. ..++.|+++.++.||++.|..+.+..++..+.+.
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~-~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDD-SYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCC-CcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 46899999855 79999975 367999999864 4344443332 4567789999999999999999999999987776
Q ss_pred eEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec----CCCCceEEEEEcCCCE
Q psy14258 294 YETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT----DLKRPSVIDYHEKEEY 369 (440)
Q Consensus 294 ~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~----~~~~p~~l~~d~~~~~ 369 (440)
...+.-. .|.+..+.+. ...||++++ .+.|..++.+.. .. ...+++. .+..|.++++. +++
T Consensus 99 ~~~i~~g-~~~g~glt~D---------g~~l~vs~g-s~~l~viD~~t~-~v-~~~I~Vg~~~~p~~~~nele~~--dg~ 163 (266)
T 2iwa_A 99 IKNFTHQ-MKDGWGLATD---------GKILYGSDG-TSILYEIDPHTF-KL-IKKHNVKYNGHRVIRLNELEYI--NGE 163 (266)
T ss_dssp EEEEECC-SSSCCEEEEC---------SSSEEEECS-SSEEEEECTTTC-CE-EEEEECEETTEECCCEEEEEEE--TTE
T ss_pred EEEEECC-CCCeEEEEEC---------CCEEEEECC-CCeEEEEECCCC-cE-EEEEEECCCCcccccceeEEEE--CCE
Confidence 6655322 2333333321 356888885 588988887664 11 1223332 12357788887 579
Q ss_pred EEEEECCCCeEEEEecCCCCeEEEEEC-CC------------CCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 370 IYYAELTSYVIERRKMFGRGKEVVIDT-GI------------YNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 370 vy~~d~~~~~I~r~~~~g~~~~~~~~~-~~------------~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+|.+...++.|.++++........+.. ++ ..|.|||+|..++.||+|....++|.++++..
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 999998899999999976444333332 22 46899999999999999999999999999864
No 74
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.49 E-value=1.1e-10 Score=111.59 Aligned_cols=241 Identities=10% Similarity=-0.009 Sum_probs=157.3
Q ss_pred ccccccce-eeeecCCcEEEe------ceEEEEecCCceEEEEEc--CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEE
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP------EAIYFCTHYMEHCMIAID--LNLSKPRGIALDPTSGYMFFTKWGATRPMLERS 201 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~------~~I~~~~~dg~~~~~~~~--~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~ 201 (440)
.....|.+ |+++.++ ||++ +.|.+.++++...+.+.. .....|.+|+++|...+||.++... +.|...
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~--~~v~v~ 113 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHK--GTAEVM 113 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTT--TEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCC--CEEEEE
Confidence 34578999 9999777 9988 368888887655443322 2356899999999777899998654 467776
Q ss_pred eCCCCCceeEEe---c---------CccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEec--CCccCceeee
Q psy14258 202 LLDGTERFPMVT---H---------KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRK--GFPVQNLYDI 266 (440)
Q Consensus 202 ~~dG~~~~~l~~---~---------~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~--~~~~~~p~gl 266 (440)
+++.......+. . ....|.++++++.+. ||+++...+.|...+++ ......+.. ......|.++
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 664322222211 1 113578899997776 99999988999998887 333332221 1113468889
Q ss_pred eEecC--EEEEEecCCCeEEEEeccC--CCceE--EEecCC-------CCeEEEEeccCCCCCCCCCc-eeEEeecCCcc
Q psy14258 267 TVFEN--NLFVTSWRNQSIIRVNKFN--SDDYE--TIANFS-------RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPA 332 (440)
Q Consensus 267 ~~~~~--~ly~td~~~~~i~~~~~~~--g~~~~--~~~~~~-------~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~ 332 (440)
++..+ .+|+++...+.|..++... ++... .+.... .|.++.+. |+ .+|+++....+
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s----------pdG~~l~v~~~~~~ 262 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS----------HDGHFLYVSNRGYN 262 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC----------TTSCEEEEEEETTT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC----------CCCCEEEEEeCCCC
Confidence 98755 7999988888777666543 43221 122211 24445444 44 57888877668
Q ss_pred EEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 333 IIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 333 ~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
.|..++++..+... ....+.. ...|.++++++.+++||+++...+.|....++
T Consensus 263 ~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 263 TLAVFAVTADGHLT-LIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECGGGCEE-EEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEECCCCcEE-EeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 88888886432111 1112222 34689999999999999999888887777555
No 75
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=3.8e-11 Score=114.51 Aligned_cols=189 Identities=10% Similarity=0.095 Sum_probs=132.2
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe--ceEEEEecC
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP--EAIYFCTHY 159 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~--~~I~~~~~d 159 (440)
+.+..+++.++.+||+|...+.|++++.++..... +. .-..|.+ +++..++ +|++ ..|.+.+.+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-----------~~-~~~~v~~i~~~~dg~-l~v~~~~gl~~~d~~ 117 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-----------HA-LPFMGSALAKISDSK-QLIASDDGLFLRDTA 117 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-----------EE-CSSCEEEEEEEETTE-EEEEETTEEEEEETT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-----------EE-CCCcceEEEEeCCCe-EEEEECCCEEEEECC
Confidence 78889999889999999988899888776543211 11 1235777 8887654 6666 679999987
Q ss_pred CceEEEEEcCC----CCCceEEEEcCCCCeEEEEEcCC----CCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEE
Q psy14258 160 MEHCMIAIDLN----LSKPRGIALDPTSGYMFFTKWGA----TRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHV 231 (440)
Q Consensus 160 g~~~~~~~~~~----~~~P~~iavd~~~g~lywtd~~~----~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~l 231 (440)
+...+.+.... ...|.++++|| .|.+|+++.+. ....|++.+ +|... .+......|+++++++.++.|
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~-~g~~~--~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA-KGKVT--KLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE-TTEEE--EEEEEESSEEEEEECTTSCEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe-CCcEE--EeeCCCcccCCeEEcCCCCEE
Confidence 65555554321 23588999999 68899987531 115799998 65432 223345679999999888899
Q ss_pred EEEeCCCCcEEEEEcc---C-C--CcEEEec-CCccCceeeeeEecC-EEEEEecCCCeEEEEec
Q psy14258 232 YWVDTYLDFIDRINYD---G-T--DRKTIRK-GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNK 288 (440)
Q Consensus 232 y~~d~~~~~i~~~~~d---G-~--~~~~i~~-~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~ 288 (440)
|+++...+.|..++++ | . ..+.+.. ......|.+++++.+ .||++.+..+.|.+++.
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~ 258 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT 258 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT
T ss_pred EEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC
Confidence 9999988999999985 4 2 2233322 111356889988754 88888877777777765
No 76
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=8.3e-12 Score=120.00 Aligned_cols=228 Identities=14% Similarity=0.115 Sum_probs=154.2
Q ss_pred cccce-eeeecCCcEEEe------c--eEEEEecCCceEEEE------EcCCCCCceEEEEcCCCCeEEEEEcCC----C
Q psy14258 134 LDGTE-RFPMVTHKIVYP------E--AIYFCTHYMEHCMIA------IDLNLSKPRGIALDPTSGYMFFTKWGA----T 194 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~------~--~I~~~~~dg~~~~~~------~~~~~~~P~~iavd~~~g~lywtd~~~----~ 194 (440)
..|.+ |+++.+ ++|++ + +|.+.+ +|+.. .. ....+..|.+|++|+. |.|||+|.+. .
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~-~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELT-QDGLI-PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSV 92 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEE-TTEEE-ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSC
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEEC-CCCee-cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCC
Confidence 58999 999765 58988 2 677777 66422 11 0124678999999994 8999999762 2
Q ss_pred CCcEEEEeCCCCC-ceeEEe-c----CccCceEEEEeCCCCEEEEEeC---CCCcEEEEEccCCCcEEEecC--------
Q psy14258 195 RPMLERSLLDGTE-RFPMVT-H----KIVYPYGVTVDFPTKHVYWVDT---YLDFIDRINYDGTDRKTIRKG-------- 257 (440)
Q Consensus 195 ~~~I~r~~~dG~~-~~~l~~-~----~~~~P~gl~vD~~~~~ly~~d~---~~~~i~~~~~dG~~~~~i~~~-------- 257 (440)
++|.+.+++... .+.+.. . ....|+++++|+.++++|++|. ..+.|..++++......+..+
T Consensus 93 -~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 93 -PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp -CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred -CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 599999987433 333321 1 1246899999988899999998 778899998864333222211
Q ss_pred -------Ccc-------------CceeeeeEecC--EEEEEecCCCeEEEEeccC---CC--------ceEEEecCCCCe
Q psy14258 258 -------FPV-------------QNLYDITVFEN--NLFVTSWRNQSIIRVNKFN---SD--------DYETIANFSRPF 304 (440)
Q Consensus 258 -------~~~-------------~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~---g~--------~~~~~~~~~~p~ 304 (440)
..+ ..|.||++..+ .||+++...+.|++++... +. ..........|.
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pd 251 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICD 251 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCS
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCc
Confidence 001 24789999754 8999999888999997431 11 012222233566
Q ss_pred EEEEeccCCCCCCCCCceeEEeecCCccEEEEEEc-CCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeE
Q psy14258 305 AIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTF-KRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVI 380 (440)
Q Consensus 305 ~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~-~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I 380 (440)
++++. +++.||+++...++|.+++. ++. . ........+..|.++++++. +.+|+++...+++
T Consensus 252 gia~d----------~~G~l~va~~~~~~V~~~d~~~G~-~--~~~~~~~~~~~p~~va~~~~-g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 252 GISID----------KDHNIYVGDLAHSAIGVITSADRA-Y--KLLVTDEKLSWTDSFNFGSD-GYLYFDCNQLHHS 314 (343)
T ss_dssp CEEEC----------TTCCEEEEEGGGTEEEEEETTTTE-E--EEEEECGGGSCEEEEEECTT-SCEEEEECCGGGS
T ss_pred eEEEC----------CCCCEEEEccCCCeEEEEECCCCC-E--EEEEECCceecCCeeEECCC-CcEEEEeCccccc
Confidence 77666 46789999988899999998 554 1 11222223678999999985 6799998755444
No 77
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.47 E-value=1.9e-10 Score=110.77 Aligned_cols=246 Identities=11% Similarity=0.076 Sum_probs=161.4
Q ss_pred CCCCceEEEEcCCCCeEEEEEcC--CCCCcEEEEeCCCC--CceeEEe--cCccCceEEEEeCCCCEEEEEeCCCCcEEE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWG--ATRPMLERSLLDGT--ERFPMVT--HKIVYPYGVTVDFPTKHVYWVDTYLDFIDR 243 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~--~~~~~I~r~~~dG~--~~~~l~~--~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~ 243 (440)
....|..++++|...+||.++.. .. +.|...+++.. ..+.+.. .....|..+++ .+++||.++...+.|..
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~-~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQ-AAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITV 124 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTT-CEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCC-CcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEE
Confidence 56789999999987789999874 22 46655555432 2222222 23457899999 58899999988888888
Q ss_pred EEccCC-Cc----EEEe-cC-------CccCceeeeeEecC--EEEEEecCCCeEEEEeccCCC-----c-e------EE
Q psy14258 244 INYDGT-DR----KTIR-KG-------FPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSD-----D-Y------ET 296 (440)
Q Consensus 244 ~~~dG~-~~----~~i~-~~-------~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~-----~-~------~~ 296 (440)
.+++.. .. ..+. .+ ....+|.++++..+ +||+++...+.|...+..... . . ..
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 887532 11 1111 11 11345688888754 799999888887766544322 1 1 11
Q ss_pred --EecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCcee-eeee--cCCCCceEEEEEcCCCEE
Q psy14258 297 --IANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQA-IMPI--TDLKRPSVIDYHEKEEYI 370 (440)
Q Consensus 297 --~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~-~~~~--~~~~~p~~l~~d~~~~~v 370 (440)
......|.++.+. |+ .+|+++....+.|..++++.. ..... .++. .+...|.++++++.+++|
T Consensus 205 ~~~~~~~~~~~~~~s----------pdg~~l~v~~~~~~~v~v~~~~~g-~~~~~~~~~~~~~~~~~~~~i~~spdg~~l 273 (361)
T 3scy_A 205 FKVAPGSGPRHLIFN----------SDGKFAYLINEIGGTVIAFRYADG-MLDEIQTVAADTVNAQGSGDIHLSPDGKYL 273 (361)
T ss_dssp EECCTTCCEEEEEEC----------TTSSEEEEEETTTCEEEEEEEETT-EEEEEEEEESCSSCCCCEEEEEECTTSSEE
T ss_pred eecCCCCCCeEEEEc----------CCCCEEEEEcCCCCeEEEEEecCC-ceEEeEEEecCCCCCCCcccEEECCCCCEE
Confidence 1223356666554 34 478888766688988888743 11111 1111 123457899999999999
Q ss_pred EEEECC-CCeEEEEecC--CCCeEEE--EECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 371 YYAELT-SYVIERRKMF--GRGKEVV--IDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 371 y~~d~~-~~~I~r~~~~--g~~~~~~--~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
|+++.. .++|...+++ ....+.+ +.. -..|.+|++++.++.||.++...+.|.+++++.
T Consensus 274 ~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 274 YASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp EEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEEC
Confidence 999987 7888887775 2222222 222 357999999999999999998889999987763
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.47 E-value=7.2e-10 Score=107.57 Aligned_cols=266 Identities=12% Similarity=0.072 Sum_probs=186.4
Q ss_pred cEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEE
Q psy14258 93 HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAI 167 (440)
Q Consensus 93 ~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~ 167 (440)
+.+|++....+.|+..++....... .+ ..-..|.+ ++.+.++.||++ +.|.+.++........+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~~----------~~-~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~ 70 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVTA----------TI-PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV 70 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEE----------EE-ECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCeEEE----------Ee-ecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE
Confidence 4577777777777666554322110 01 22345788 999888889888 78999998765544443
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD 247 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d 247 (440)
... ..|.+++++|...+||++.... +.|...++........+.. ...|.++++++.++.||++....+.|...++.
T Consensus 71 ~~~-~~v~~~~~spdg~~l~~~~~~~--~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 146 (391)
T 1l0q_A 71 PAG-SSPQGVAVSPDGKQVYVTNMAS--STLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTV 146 (391)
T ss_dssp ECS-SSEEEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECC-CCccceEECCCCCEEEEEECCC--CEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 322 3899999999888899988654 5899999986544333332 34689999998888999999888999999986
Q ss_pred CCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeE
Q psy14258 248 GTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFL 324 (440)
Q Consensus 248 G~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l 324 (440)
.......... -..|.++++..+ .||++....+.|...+..+++....+.....+.++.+. |+ .+|
T Consensus 147 ~~~~~~~~~~--~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~----------~~g~~l 214 (391)
T 1l0q_A 147 TKAVINTVSV--GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVN----------PEGTKA 214 (391)
T ss_dssp TTEEEEEEEC--CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEEC----------TTSSEE
T ss_pred CCcEEEEEec--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEEC----------CCCCEE
Confidence 5544333332 246788888644 88899888899999998777655555443345555443 23 467
Q ss_pred EeecC--CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCC
Q psy14258 325 LYAKG--KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRG 389 (440)
Q Consensus 325 ~~~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~ 389 (440)
+++.. ..+.|+.+++... .....+.....|.++++++.++.+|++....+.|+..++....
T Consensus 215 ~~~~~~~~~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 215 YVTNVDKYFNTVSMIDTGTN----KITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp EEEEECSSCCEEEEEETTTT----EEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred EEEecCcCCCcEEEEECCCC----eEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 77653 4578998888655 2333333345688999999999999998889999999987543
No 79
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.46 E-value=4.1e-11 Score=114.23 Aligned_cols=229 Identities=13% Similarity=0.058 Sum_probs=153.9
Q ss_pred eeccccccce-eeeecCCcEEEe----ceEEEEecCCceEEEEE------cCCCCCceEEEEcCC---CCeEEEEEcCCC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAI------DLNLSKPRGIALDPT---SGYMFFTKWGAT 194 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~------~~~~~~P~~iavd~~---~g~lywtd~~~~ 194 (440)
+.+++..|.+ |+++.++ ||++ ++|.+.+.++...+.+. ..+...|.|||++|. +|+||++.....
T Consensus 27 va~gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred eecCCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 5678999999 9998765 9998 67999887643333332 134567999999994 799998753222
Q ss_pred CCcEEEEeCCCC--------CceeEEec----CccCceEEEEeCCCCEEEEEeC-------------CCCcEEEEEccCC
Q psy14258 195 RPMLERSLLDGT--------ERFPMVTH----KIVYPYGVTVDFPTKHVYWVDT-------------YLDFIDRINYDGT 249 (440)
Q Consensus 195 ~~~I~r~~~dG~--------~~~~l~~~----~~~~P~gl~vD~~~~~ly~~d~-------------~~~~i~~~~~dG~ 249 (440)
..+|.|..+++. ..++++.. ....+..|++++ .++||++.. ..++|.+++.||+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 259999999872 23444431 234567799995 568999942 3579999999997
Q ss_pred --------CcEEEecCCccCceeeeeEec-CEEEEEecCCC---eEEEEeccCCCce------------------EEEec
Q psy14258 250 --------DRKTIRKGFPVQNLYDITVFE-NNLFVTSWRNQ---SIIRVNKFNSDDY------------------ETIAN 299 (440)
Q Consensus 250 --------~~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~---~i~~~~~~~g~~~------------------~~~~~ 299 (440)
..++...+ +++|+|++++. +.||++|.+.. .|.++.+ |... ..+..
T Consensus 185 ip~~nPf~~~~i~a~G--~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~--G~nyGwP~~~g~~~~~~~~~P~~~~~~ 260 (347)
T 3das_A 185 PAPGNPFPGSPVYSYG--HRNVQGLAWDDKQRLFASEFGQDTWDELNAIKP--GDNYGWPEAEGKGGGSGFHDPVAQWST 260 (347)
T ss_dssp BCTTCSSTTCCEEEBC--CSBCCEEEECTTCCEEEEECCSSSCEEEEEECT--TCBCCTTTCCSSCCCTTCCCCSEEECT
T ss_pred ccCCCCCCCCeEEeeC--CCCcceEEECCCCCEEEEecCCCCCceeeEEcC--CCEecCCcccCCCCCccccCCcEecCC
Confidence 55555556 88999999986 49999997653 4544432 1110 00111
Q ss_pred C-CCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEEC
Q psy14258 300 F-SRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAEL 375 (440)
Q Consensus 300 ~-~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~ 375 (440)
- ..|.++.++ ++.+|++..+..+|.++.+++.+...+....+.+ ..+|++|+.+++ +.||+++.
T Consensus 261 ~~~ap~G~~~~-----------~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pD-G~lyv~td 326 (347)
T 3das_A 261 DEASPSGIAYA-----------EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGG-DKLWLVTS 326 (347)
T ss_dssp TTCCEEEEEEE-----------TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEET-TEEEEEEC
T ss_pred CCCCCcceEEE-----------cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCC-CcEEEEEc
Confidence 1 145566666 3567888777789999999876211111223333 468999999995 67999964
No 80
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.46 E-value=6e-10 Score=113.82 Aligned_cols=323 Identities=9% Similarity=0.030 Sum_probs=214.5
Q ss_pred EeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEec--CC
Q psy14258 87 CTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTH--YM 160 (440)
Q Consensus 87 ~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~--dg 160 (440)
++++. +++|.+....+.|..++..... .+ . .+..+. .|.+ ++++.++.||++ +.|.+.++ ..
T Consensus 144 ~~~p~-~~~~vs~~~d~~V~v~D~~t~~--~~------~--~i~~g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t 211 (543)
T 1nir_A 144 DLDLP-NLFSVTLRDAGQIALVDGDSKK--IV------K--VIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKE 211 (543)
T ss_dssp CCCGG-GEEEEEEGGGTEEEEEETTTCC--EE------E--EEECST-TEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred ccCCC-CEEEEEEcCCCeEEEEECCCce--EE------E--EEecCc-ccceEEECCCCCEEEEECCCCeEEEEECcCCC
Confidence 36664 6899999888888766543222 11 1 122222 3889 999999999999 78999999 33
Q ss_pred ceEEEEEcCCCCCceEEEEcC----CCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC-----------ccCceEEEEe
Q psy14258 161 EHCMIAIDLNLSKPRGIALDP----TSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK-----------IVYPYGVTVD 225 (440)
Q Consensus 161 ~~~~~~~~~~~~~P~~iavd~----~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~-----------~~~P~gl~vD 225 (440)
..+..-+. .-..|++++++| ..++||.++... +.|...+.+.......+... -.+|.++++.
T Consensus 212 ~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~--~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s 288 (543)
T 1nir_A 212 PTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWP--PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIAS 288 (543)
T ss_dssp CEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEES--SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEEC
T ss_pred CcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccC--CeEEEEeccccccceeecccCcccCccccccCCceEEEEEC
Confidence 22222222 235799999999 888999998654 47877776533332233221 1257789999
Q ss_pred CCCCEEEEEeCCCCcEEEEEccC-CCcE--EEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEecC
Q psy14258 226 FPTKHVYWVDTYLDFIDRINYDG-TDRK--TIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIANF 300 (440)
Q Consensus 226 ~~~~~ly~~d~~~~~i~~~~~dG-~~~~--~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~~ 300 (440)
+.+.++|++....+.|..+++.. .... .+.. -..|.++++..+ ++|.+....+.|..++..+++....+...
T Consensus 289 ~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~---~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g 365 (543)
T 1nir_A 289 HEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA---APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVG 365 (543)
T ss_dssp SSSSEEEEEETTTTEEEEEECTTSSSCEEEEEEC---CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred CCCCEEEEEECCCCeEEEEEecCCCcceeEEecc---CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccC
Confidence 88999999999999999999854 3333 2322 356888888644 79999888899999999888766655433
Q ss_pred CCCe---EEEEeccCCCCCCCCCc-eeEEeecC-CccEEEEEEcCCCCCC---ceeeeeecCC-CCceEEEEEcCCCEEE
Q psy14258 301 SRPF---AIHIYHRQKQPDALKPS-TFLLYAKG-KPAIIKGLTFKRDGTT---EQAIMPITDL-KRPSVIDYHEKEEYIY 371 (440)
Q Consensus 301 ~~p~---~~~v~~~~~qp~~~~~~-~~l~~~~~-~~~~I~~i~~~~~~~~---~~~~~~~~~~-~~p~~l~~d~~~~~vy 371 (440)
..|. +..+++ |+ +.++++.. ..+.|..++.+..+.. ......+.+. ..+..++++|.+++||
T Consensus 366 ~~ph~g~g~~~~~---------p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~ 436 (543)
T 1nir_A 366 KTPHPGRGANFVH---------PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLY 436 (543)
T ss_dssp SSBCCTTCEEEEE---------TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEE
T ss_pred CCCCCCCCcccCC---------CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEE
Confidence 2332 444443 33 56777654 4578999998773211 1222233322 2457899999999888
Q ss_pred EEEC------CCCeEEEEecCCCC-e-EEE-------EECCCCCeeeEEEecCCCcEEEEeC----CCCeEEEEEeCCCe
Q psy14258 372 YAEL------TSYVIERRKMFGRG-K-EVV-------IDTGIYNVEGMAVDWMANNLYWTDA----GIGTINVAKISDFS 432 (440)
Q Consensus 372 ~~d~------~~~~I~r~~~~g~~-~-~~~-------~~~~~~~~~glAvD~~~~~lYwtd~----~~~~I~~~~~~g~~ 432 (440)
++.. ..++|..++.+... . +++ +..+-..+..++++..++.||++.. ..+.|.+.+....+
T Consensus 437 v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 437 VDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp ECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred EecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 7652 25699999987433 2 333 1233467889999999999998853 35899999876534
Q ss_pred eeEE
Q psy14258 433 IRKV 436 (440)
Q Consensus 433 ~~~~ 436 (440)
..++
T Consensus 517 ~~~~ 520 (543)
T 1nir_A 517 LKAV 520 (543)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 3443
No 81
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.45 E-value=1.6e-10 Score=110.09 Aligned_cols=238 Identities=15% Similarity=0.132 Sum_probs=160.6
Q ss_pred EEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe------cCccCceEEEEeCC---CCEEEEEeC
Q psy14258 166 AIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT------HKIVYPYGVTVDFP---TKHVYWVDT 236 (440)
Q Consensus 166 ~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~------~~~~~P~gl~vD~~---~~~ly~~d~ 236 (440)
++..++..|++|++.| .|.||+++... ++|.+.+.++...+.+.. ....-|.||++++. ++.||++..
T Consensus 26 ~va~gL~~P~~ia~~p-dG~llVter~~--G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 26 TVATGLNSPWGLAPLP-GGDLLVSSRDE--ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEECCCSSEEEEEECT-TSCEEEEETTT--CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred EeecCCCCceEEEEcC-CCcEEEEEecC--CEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 4567899999999999 68999999843 699999876544433321 23567999999974 789998753
Q ss_pred --CCCcEEEEEccCC--------CcEEEecC---CccCceeeeeEecC-EEEEEec-------------CCCeEEEEecc
Q psy14258 237 --YLDFIDRINYDGT--------DRKTIRKG---FPVQNLYDITVFEN-NLFVTSW-------------RNQSIIRVNKF 289 (440)
Q Consensus 237 --~~~~i~~~~~dG~--------~~~~i~~~---~~~~~p~gl~~~~~-~ly~td~-------------~~~~i~~~~~~ 289 (440)
..++|.++.+++. ..++++.+ ...+....|++..| .||++.- ..++|+|++..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 4568999988762 24555442 11334566888765 9999942 35899999985
Q ss_pred CCC-------ceEEEe-cCCCCeEEEEeccCCCCCCCCCceeEEeecCCc---cEEEEEEcCCC-CC--------Cceee
Q psy14258 290 NSD-------DYETIA-NFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKP---AIIKGLTFKRD-GT--------TEQAI 349 (440)
Q Consensus 290 ~g~-------~~~~~~-~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~---~~I~~i~~~~~-~~--------~~~~~ 349 (440)
+.- ..++++ ++-+|.++.+. |++.|++++... ..|.++...+. +. ..+..
T Consensus 183 G~ip~~nPf~~~~i~a~G~RNp~Gla~d----------p~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~ 252 (347)
T 3das_A 183 GEPAPGNPFPGSPVYSYGHRNVQGLAWD----------DKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFH 252 (347)
T ss_dssp SSBCTTCSSTTCCEEEBCCSBCCEEEEC----------TTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCC
T ss_pred CCccCCCCCCCCeEEeeCCCCcceEEEC----------CCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCcccc
Confidence 330 233443 55578888766 356688887643 35666543322 00 01122
Q ss_pred eeecC----CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCC----eEEEEECCCCCeeeEEEecCCCcEEEEeCC
Q psy14258 350 MPITD----LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRG----KEVVIDTGIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 350 ~~~~~----~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~----~~~~~~~~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
.|+.. ...|.|++|- ++.+|.+....++|.|+.+++.. .+.++......|.++++++ .+.||+++..
T Consensus 253 ~P~~~~~~~~~ap~G~~~~--~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~p-DG~lyv~td~ 327 (347)
T 3das_A 253 DPVAQWSTDEASPSGIAYA--EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAG-GDKLWLVTSN 327 (347)
T ss_dssp CCSEEECTTTCCEEEEEEE--TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEE-TTEEEEEECT
T ss_pred CCcEecCCCCCCCcceEEE--cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECC-CCcEEEEEcC
Confidence 23321 2368899997 57899999999999999998653 2444443357899999998 4579999653
No 82
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.43 E-value=2.6e-10 Score=108.64 Aligned_cols=236 Identities=14% Similarity=0.023 Sum_probs=162.2
Q ss_pred EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEE
Q psy14258 164 MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDR 243 (440)
Q Consensus 164 ~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~ 243 (440)
+.+.......+.+.+.||..+.|||++... .+|.+.+.++...+.+ .. -..|.+++++ ..+++|++. .+.|..
T Consensus 41 ~~~~~~~~~~~egp~~~~~~~~l~~~d~~~--~~i~~~d~~~~~~~~~-~~-~~~v~~i~~~-~dg~l~v~~--~~gl~~ 113 (326)
T 2ghs_A 41 RVLDETPMLLGEGPTFDPASGTAWWFNILE--RELHELHLASGRKTVH-AL-PFMGSALAKI-SDSKQLIAS--DDGLFL 113 (326)
T ss_dssp EEEECSCCSBEEEEEEETTTTEEEEEEGGG--TEEEEEETTTTEEEEE-EC-SSCEEEEEEE-ETTEEEEEE--TTEEEE
T ss_pred EEeeccCCCCCcCCeEeCCCCEEEEEECCC--CEEEEEECCCCcEEEE-EC-CCcceEEEEe-CCCeEEEEE--CCCEEE
Confidence 445554566799999999889999999875 5999999987654433 22 2468899998 457788776 345999
Q ss_pred EEccCCCcEEEecC---CccCceeeeeEecC-EEEEEecC------CCeEEEEeccCCCceEEEecCCCCeEEEEeccCC
Q psy14258 244 INYDGTDRKTIRKG---FPVQNLYDITVFEN-NLFVTSWR------NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQK 313 (440)
Q Consensus 244 ~~~dG~~~~~i~~~---~~~~~p~gl~~~~~-~ly~td~~------~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~ 313 (440)
++.++...+.+... .....|.+++++.+ .+|+++.. .+.|++++ +++...+......|.++.+.
T Consensus 114 ~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s---- 187 (326)
T 2ghs_A 114 RDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFS---- 187 (326)
T ss_dssp EETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEEC----
T ss_pred EECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEc----
Confidence 99876665555431 11346788888865 88888753 46899888 45433343444456777655
Q ss_pred CCCCCCCc-eeEEeecCCccEEEEEEcCC-CC-C-Cc-eeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 314 QPDALKPS-TFLLYAKGKPAIIKGLTFKR-DG-T-TE-QAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 314 qp~~~~~~-~~l~~~~~~~~~I~~i~~~~-~~-~-~~-~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
++ ..|++++...+.|.+++++. .+ . .. .....+. ....|.++++|+.+ .+|+++...+.|++++++|
T Consensus 188 ------~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g 260 (326)
T 2ghs_A 188 ------PDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDG 260 (326)
T ss_dssp ------TTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTC
T ss_pred ------CCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCC
Confidence 34 47888887778999999862 21 1 11 1122221 22468899999865 5999987788999999977
Q ss_pred CCeEEEEECCCCCeeeEEEe-cCCCcEEEEeCCC
Q psy14258 388 RGKEVVIDTGIYNVEGMAVD-WMANNLYWTDAGI 420 (440)
Q Consensus 388 ~~~~~~~~~~~~~~~glAvD-~~~~~lYwtd~~~ 420 (440)
.....+ ......|.+++++ ..++.||++....
T Consensus 261 ~~~~~i-~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 261 NHIARY-EVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CEEEEE-ECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CEEEEE-ECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 543333 3344579999998 7788999997654
No 83
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.42 E-value=2.5e-09 Score=109.22 Aligned_cols=333 Identities=8% Similarity=-0.013 Sum_probs=212.6
Q ss_pred ceeEEEEeecccceeeeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT 125 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 125 (440)
...+++++... ++|..++.......-.++.... +.++++++.+++||.++.. +.|..++++....+.+ .
T Consensus 148 ~~~~~vs~~~d---~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~------~ 216 (543)
T 1nir_A 148 PNLFSVTLRDA---GQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKV------A 216 (543)
T ss_dssp GGEEEEEEGGG---TEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEE------E
T ss_pred CCEEEEEEcCC---CeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEE------E
Confidence 34566666543 4588888775554433343332 8999999999999999987 7888777731121111 1
Q ss_pred cceeeccccccce-eeee----cCCcEEEe----ceEEEEecCCceEEEEEcC-C----------CCCceEEEEcCCCCe
Q psy14258 126 RPMLERSLLDGTE-RFPM----VTHKIVYP----EAIYFCTHYMEHCMIAIDL-N----------LSKPRGIALDPTSGY 185 (440)
Q Consensus 126 ~v~~~~~~~~p~~-avD~----~~~~lY~~----~~I~~~~~dg~~~~~~~~~-~----------~~~P~~iavd~~~g~ 185 (440)
. + .....|.+ |+++ .++.||++ +.|.+.+.....+...+.. + -..|.+|++.|..+.
T Consensus 217 ~--i-~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~ 293 (543)
T 1nir_A 217 E--I-KIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPE 293 (543)
T ss_dssp E--E-ECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSE
T ss_pred E--E-ecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCE
Confidence 1 2 23457999 9999 89999988 6788888765444333332 1 125789999998888
Q ss_pred EEEEEcCCCCCcEEEEeCCCCCceeEEe-cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCce-
Q psy14258 186 MFFTKWGATRPMLERSLLDGTERFPMVT-HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNL- 263 (440)
Q Consensus 186 lywtd~~~~~~~I~r~~~dG~~~~~l~~-~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p- 263 (440)
+|++.... ++|...+.+......+.. ..-.+|.++++|+.+++||.+....+.|..++...............+||
T Consensus 294 ~~vs~~~~--g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g 371 (543)
T 1nir_A 294 FIVNVKET--GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPG 371 (543)
T ss_dssp EEEEETTT--TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCT
T ss_pred EEEEECCC--CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCC
Confidence 88888665 699999986433222111 12357999999999999999998889999999865443332231124455
Q ss_pred eeeeEe---cCEEEEEec-CCCeEEEEeccC-------CCceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEEeecC-
Q psy14258 264 YDITVF---ENNLFVTSW-RNQSIIRVNKFN-------SDDYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLLYAKG- 329 (440)
Q Consensus 264 ~gl~~~---~~~ly~td~-~~~~i~~~~~~~-------g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~- 329 (440)
.++.+. ++.+|.+.. ..+.|..++..+ .+....+.... .+..++ +| |+ .+|+++..
T Consensus 372 ~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~-~~---------pdg~~l~v~~~~ 441 (543)
T 1nir_A 372 RGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIK-TH---------PKSSHLYVDTTF 441 (543)
T ss_dssp TCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE-CC---------TTCCEEEECCTT
T ss_pred CCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEE-cC---------CCCCcEEEecCC
Confidence 355543 257888875 567888888766 44444444322 234444 33 34 45666541
Q ss_pred C-----ccEEEEEEcCCCCCCceeeeeec-------CCCCceEEEEEcCCCEEEEEEC----CCCeEEEEecCCCCeEEE
Q psy14258 330 K-----PAIIKGLTFKRDGTTEQAIMPIT-------DLKRPSVIDYHEKEEYIYYAEL----TSYVIERRKMFGRGKEVV 393 (440)
Q Consensus 330 ~-----~~~I~~i~~~~~~~~~~~~~~~~-------~~~~p~~l~~d~~~~~vy~~d~----~~~~I~r~~~~g~~~~~~ 393 (440)
+ ...|..++++.. ...-..+++. +..++..++|++.++.||++.. ..+.|...+.........
T Consensus 442 ~~~~~~~~~v~v~d~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~ 520 (543)
T 1nir_A 442 NPDARISQSVAVFDLKNL-DAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAV 520 (543)
T ss_dssp CSSHHHHTCEEEEETTCT-TSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEE
T ss_pred CCCcccCceEEEEECCCC-CCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEe
Confidence 1 258899998765 2221233331 2356779999999999999864 368999988775433333
Q ss_pred EE-CCCCCeeeEE
Q psy14258 394 ID-TGIYNVEGMA 405 (440)
Q Consensus 394 ~~-~~~~~~~glA 405 (440)
+. ..+..|.|.-
T Consensus 521 i~~~~~~~p~g~~ 533 (543)
T 1nir_A 521 VKDPRLITPTGKF 533 (543)
T ss_dssp ECCTTCCSEEEEE
T ss_pred ecCCCccCCCeee
Confidence 32 4467788754
No 84
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.42 E-value=3e-10 Score=111.57 Aligned_cols=276 Identities=13% Similarity=0.092 Sum_probs=169.4
Q ss_pred cCCcEEEe--------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcC--------CCCCcEEEEeCCCC
Q psy14258 143 VTHKIVYP--------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWG--------ATRPMLERSLLDGT 206 (440)
Q Consensus 143 ~~~~lY~~--------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~--------~~~~~I~r~~~dG~ 206 (440)
..+.+|++ +.|.+.|++......-+..+ ..| +|+++|..++||.++.. .. ..|...+....
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-~~P-gia~SpDgk~lyVan~~~~~~~~G~~~-~~VsviD~~t~ 159 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-FLP-HPVAAEDGSFFAQASTVFERIARGKRT-DYVEVFDPVTF 159 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-SSC-EEEECTTSSCEEEEEEEEEETTEEEEE-EEEEEECTTTC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-CCC-ceEECCCCCEEEEEeccccccccCCCC-CEEEEEECCCC
Confidence 45668988 27888888765544333333 468 99999999999999852 11 36888877543
Q ss_pred Cce-eEEec------CccCceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCCc-EEEecCCccCceeeeeEecCEEEEEe
Q psy14258 207 ERF-PMVTH------KIVYPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTDR-KTIRKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 207 ~~~-~l~~~------~~~~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~~-~~i~~~~~~~~p~gl~~~~~~ly~td 277 (440)
... .+... ....|.++++++.+++||+++.. .+.|..+|...... ..+..+ ...++.-.+...|++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~----g~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP----DCYHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC----SEEEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC----CceeeccCCCcEEEEE
Confidence 322 22111 02469999999999999999875 67899998765332 233221 1122333345677777
Q ss_pred cCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCC------CCceeEEeecCCccEEEEEEcCCCCCCce-eee
Q psy14258 278 WRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDAL------KPSTFLLYAKGKPAIIKGLTFKRDGTTEQ-AIM 350 (440)
Q Consensus 278 ~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~------~~~~~l~~~~~~~~~I~~i~~~~~~~~~~-~~~ 350 (440)
..++++..++..+++...... .++....+|... .++..++.+.. +.+..+++.+. ...- ...
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~--------~~~~v~~~p~~~~~~~~~dg~~~~~~s~~--g~V~ViD~~~~-~~~v~~~~ 304 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNT--------EVFHTEDELLINHPAFSLRSGRLVWPTYT--GKIFQADLTAE-GATFRAPI 304 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEEC--------CCCSCTTSCBCSCCEECTTTCEEEEEBTT--SEEEEEEECSS-CEEECCCE
T ss_pred cCCCCEEEEECCCCcEEEEee--------eeeccCCCceeeEeeecCCCCEEEEEeCC--CcEEEEeccCC-ceEEeeee
Confidence 777777777764444332211 111111112110 12344555543 78888888654 1000 000
Q ss_pred ee------cCCCCceE---EEEEcCCCEEEEEEC---------CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCC-
Q psy14258 351 PI------TDLKRPSV---IDYHEKEEYIYYAEL---------TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMAN- 411 (440)
Q Consensus 351 ~~------~~~~~p~~---l~~d~~~~~vy~~d~---------~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~- 411 (440)
++ .....|.+ +++++.++++|+++. ..+.|..+++.......-+..+ ..|.||++++.++
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~ 383 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEP 383 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSC
T ss_pred eeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCE
Confidence 10 00012444 899999999999974 2468999998864432222222 3699999999999
Q ss_pred cEEEEeCCCCeEEEEEeCCCeeeEEe
Q psy14258 412 NLYWTDAGIGTINVAKISDFSIRKVL 437 (440)
Q Consensus 412 ~lYwtd~~~~~I~~~~~~g~~~~~~l 437 (440)
.||.++...+.|.++++...+..+.|
T Consensus 384 ~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 384 LLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 99999988999999998764544443
No 85
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.41 E-value=2.6e-09 Score=103.70 Aligned_cols=279 Identities=9% Similarity=0.027 Sum_probs=168.4
Q ss_pred ecCCcEEEe-c-------eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC-------CCCcEEEEeCCCC
Q psy14258 142 MVTHKIVYP-E-------AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA-------TRPMLERSLLDGT 206 (440)
Q Consensus 142 ~~~~~lY~~-~-------~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~-------~~~~I~r~~~dG~ 206 (440)
+..+.+|++ . .|.+++.+......-+..+ ..| +|++.|..++||.++... ....|.+.+....
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 345668887 3 7788887754433223333 458 999999989999998421 0146888887532
Q ss_pred CceeEEecC-------ccCceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCCcEEE-ecCCccCceeeeeEecCEEEEEe
Q psy14258 207 ERFPMVTHK-------IVYPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTDRKTI-RKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 207 ~~~~l~~~~-------~~~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~~~~i-~~~~~~~~p~gl~~~~~~ly~td 277 (440)
....-+... ...|.++++++.+++||+++.. .+.|..++ ........ .. +.....+.-.+...|++.
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~---~~~~~~~~~~~~~~~~~~ 183 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS---SPTCYHIHPGAPSTFYLL 183 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC---CCceEEEEeCCCceEEEE
Confidence 221111111 2468999999999999999865 67899998 65433211 11 212222222345788888
Q ss_pred cCCCeEEEEeccCCCceEEEe-----cCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee
Q psy14258 278 WRNQSIIRVNKFNSDDYETIA-----NFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI 352 (440)
Q Consensus 278 ~~~~~i~~~~~~~g~~~~~~~-----~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~ 352 (440)
+.++++..++. +++...... ....|... ++...+ ..+..++++.. +.+..+++.+....-...+.+
T Consensus 184 ~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~---~~~~~~---~~~~~~~~~~~--~~v~vid~~~~~~~v~~~~~~ 254 (373)
T 2mad_H 184 CAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLT---QPAQAN---KSGRIVWPVYS--GKILQADISAAGATNKAPIDA 254 (373)
T ss_pred cCCCCEEEEEC-CCcEEEEEeccccccCCcceee---cceeEe---cCCEEEEEcCC--ceEEEEeccCCcceEeeeeee
Confidence 88899888888 776553221 00111111 100000 11234455433 688888886541110001111
Q ss_pred ------cCCCCceE---EEEEcCCCEEEEEEC---------CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCC-cE
Q psy14258 353 ------TDLKRPSV---IDYHEKEEYIYYAEL---------TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMAN-NL 413 (440)
Q Consensus 353 ------~~~~~p~~---l~~d~~~~~vy~~d~---------~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~-~l 413 (440)
.....|.+ +++++.++++|++.. ..+.|..+++.......-+..+ ..|.+|++++.++ .|
T Consensus 255 ~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g-~~p~~i~~s~Dg~~~l 333 (373)
T 2mad_H 255 LSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLG-HDVDAISVAQDGGPDL 333 (373)
T ss_pred cCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECC-CCcCeEEECCCCCeEE
Confidence 01113444 889999999999864 2468999999864332223333 4699999999998 78
Q ss_pred EEEeCCCCeEEEEEeCCCeeeEE
Q psy14258 414 YWTDAGIGTINVAKISDFSIRKV 436 (440)
Q Consensus 414 Ywtd~~~~~I~~~~~~g~~~~~~ 436 (440)
|.++.+.+.|.++++...+..+.
T Consensus 334 ~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 334 YALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEcCCCCeEEEEECCCCCEEee
Confidence 88887889999999986444444
No 86
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.39 E-value=2.5e-10 Score=104.68 Aligned_cols=197 Identities=9% Similarity=0.034 Sum_probs=140.1
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC-ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC-C
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG-T 249 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~-~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG-~ 249 (440)
..|+||++++. |.||.+......++|.+.++.... ...+-......+.|++++ +++||+++...+.+..+|... .
T Consensus 21 ~f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 21 AFTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CCEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CCcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 46899999985 899999742111599999996433 322222233456688887 789999999999999999763 3
Q ss_pred CcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe-c-----CCCCeEEEEeccCCCCCCCCCcee
Q psy14258 250 DRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA-N-----FSRPFAIHIYHRQKQPDALKPSTF 323 (440)
Q Consensus 250 ~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~-~-----~~~p~~~~v~~~~~qp~~~~~~~~ 323 (440)
....+..+ ...+.|++.+++++|.++ .++.|..+|..+.+....+. + ...|.++... ++.
T Consensus 98 v~~~i~~g--~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-----------dg~ 163 (266)
T 2iwa_A 98 NIKNFTHQ--MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-----------NGE 163 (266)
T ss_dssp EEEEEECC--SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-----------TTE
T ss_pred EEEEEECC--CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-----------CCE
Confidence 33343323 246678888888999999 68999999998877665443 1 1135566544 356
Q ss_pred EEeecCCccEEEEEEcCCCCCCceeeeeecC------------CCCceEEEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 324 LLYAKGKPAIIKGLTFKRDGTTEQAIMPITD------------LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 324 l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~------------~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
||++....+.|.+|++... .. ...+++.+ ...|.||+||+.++++|++....++++.+++..
T Consensus 164 lyvn~~~~~~V~vID~~tg-~V-~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDG-TL-LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTC-CE-EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCC-cE-EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 8887766689999998765 21 12333332 246789999999999999999999999998864
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.38 E-value=1.7e-09 Score=106.49 Aligned_cols=279 Identities=12% Similarity=0.074 Sum_probs=187.7
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEe
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCT 157 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~ 157 (440)
+.++++++ ++++|++....+.|+..++........ . +...+......+.+ ++++ .+++|++ +.|.+.+
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~----~-~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d 197 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRL----S-PPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFD 197 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEE----C-CCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEE
T ss_pred ceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeee----c-CcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEE
Confidence 67889998 789999988878888777653322110 0 00001112223455 6543 4457777 6899999
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeC-
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDT- 236 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~- 236 (440)
++.......+......|.+++++|...+||.+.... +.|...+++.......+. ....|.++++++.++.||.+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 198 LKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWIS--EDISVIDRKTKLEIRKTD-KIGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp TTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTT--TEEEEEETTTTEEEEECC-CCSEEEEEEECTTSSEEEEEEEE
T ss_pred CCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCC--CcEEEEECCCCcEEEEec-CCCCceEEEEcCCCCEEEEEECC
Confidence 887554444444556899999999888899988654 589999986543322222 2345899999988889998875
Q ss_pred ------CCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEE
Q psy14258 237 ------YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHI 308 (440)
Q Consensus 237 ------~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v 308 (440)
..+.|...++........... ...|.++++..+ .+|++....+.|...+..+++....+.....|.++.+
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 352 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGP--PGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFDKPNTIAL 352 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEE--EECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEE
T ss_pred CCccccCCCeEEEEECCCCcEEeeccC--CCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCCCCCeEEE
Confidence 345788888765443332221 236778887644 7999988899999999877766555554445666655
Q ss_pred eccCCCCCCCCCc-eeEEeecCCc--------------cEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEE
Q psy14258 309 YHRQKQPDALKPS-TFLLYAKGKP--------------AIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 309 ~~~~~qp~~~~~~-~~l~~~~~~~--------------~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~ 373 (440)
. |+ .+|+++.... +.|+.+++... .....+.....|.++++++.++.||.+
T Consensus 353 s----------~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 353 S----------PDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTD----TVKEFWEAGNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp C----------TTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTT----EEEEEEECSSSEEEEEECTTSCEEEEE
T ss_pred c----------CCCCEEEEEecCCCccccccccccccceEEEEEECCCC----cEEEEecCCCCCceEEEcCCCCEEEEE
Confidence 5 23 4566665532 48888887654 333333444578999999999999999
Q ss_pred ECCCCeEEEEecCC
Q psy14258 374 ELTSYVIERRKMFG 387 (440)
Q Consensus 374 d~~~~~I~r~~~~g 387 (440)
+...++|+..++++
T Consensus 419 ~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 419 DFLDHQIRVYRRDG 432 (433)
T ss_dssp ETTTTEEEEEEETT
T ss_pred ECCCCeEEEEEecC
Confidence 87789998888765
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.37 E-value=2.6e-09 Score=102.71 Aligned_cols=281 Identities=11% Similarity=-0.030 Sum_probs=172.8
Q ss_pred EEEEEeeecccEEEEEEcC---CCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe-c------
Q psy14258 83 AIYFCTHYMEHCMIAIDLN---LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP-E------ 151 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~---~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~-~------ 151 (440)
|...+......++|+.... .+.|+...++....+. ..+... ....|.. |+++.++.||.+ .
T Consensus 4 p~~~~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~-------~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~ 75 (361)
T 3scy_A 4 PTDPSTTDSELTMLVGTYTSGNSKGIYTFRFNEETGES-------LPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQA 75 (361)
T ss_dssp --CCCGGGGEEEEEEEECCSSSCCEEEEEEEETTTCCE-------EEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTC
T ss_pred CCChhhCCCceEEEEEeccCCCCCCEEEEEEeCCCCCE-------EEeecc-cCCCCceEEECCCCCEEEEEEccCCCCC
Confidence 3334444444566666543 2456665555322111 011112 5678999 999999989998 2
Q ss_pred eEEEEecCC--ceEEEEE--cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc--ee--EEe-c--------
Q psy14258 152 AIYFCTHYM--EHCMIAI--DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER--FP--MVT-H-------- 214 (440)
Q Consensus 152 ~I~~~~~dg--~~~~~~~--~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~--~~--l~~-~-------- 214 (440)
.|.+.+++. ...+.+. ......|..+++ ..++||.++... +.|...+++.... .. ... .
T Consensus 76 ~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~--~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~ 151 (361)
T 3scy_A 76 AVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSG--GSITVFPIGQDGALLPASDVIEFKGSGPDKER 151 (361)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTT--TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT
T ss_pred cEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCC--CEEEEEEeCCCCcCcccceeEEccCCCCCccc
Confidence 676665543 2333222 223468999999 357899998765 5788887753221 11 111 1
Q ss_pred -CccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCC-------cEE-----EecCCccCceeeeeEecC--EEEEEecC
Q psy14258 215 -KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTD-------RKT-----IRKGFPVQNLYDITVFEN--NLFVTSWR 279 (440)
Q Consensus 215 -~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~-------~~~-----i~~~~~~~~p~gl~~~~~--~ly~td~~ 279 (440)
...+|.++++++.+++||+++...+.|...+++... ... .........|.++++..+ .+|+++..
T Consensus 152 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 152 QTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp CSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC
Confidence 123468899999888999999988988888876432 211 111112457889998755 79999988
Q ss_pred CCeEEEEeccCCCceEE--EecC----CCCeEEEEeccCCCCCCCCCc-eeEEeecCC-ccEEEEEEcCCC-CCCceeee
Q psy14258 280 NQSIIRVNKFNSDDYET--IANF----SRPFAIHIYHRQKQPDALKPS-TFLLYAKGK-PAIIKGLTFKRD-GTTEQAIM 350 (440)
Q Consensus 280 ~~~i~~~~~~~g~~~~~--~~~~----~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~-~~~I~~i~~~~~-~~~~~~~~ 350 (440)
.+.|..++..+++...+ +... ..|.++.+. |+ .+|++++.. .+.|..++++.. +... ...
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s----------pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~-~~~ 300 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS----------PDGKYLYASNRLKADGVAIFKVDETNGTLT-KVG 300 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC----------TTSSEEEEEECSSSCEEEEEEECTTTCCEE-EEE
T ss_pred CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC----------CCCCEEEEECCCCCCEEEEEEEcCCCCcEE-Eee
Confidence 88888888765543222 2211 234455544 34 578888776 678888887633 1111 111
Q ss_pred eecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 351 PITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 351 ~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
.+..-..|.++++++.+++||+++...+.|....++
T Consensus 301 ~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 301 YQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 222235789999999999999999888888776555
No 89
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.33 E-value=1.4e-08 Score=103.78 Aligned_cols=324 Identities=9% Similarity=-0.015 Sum_probs=208.3
Q ss_pred eeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEecC---C
Q psy14258 88 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHY---M 160 (440)
Q Consensus 88 ~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~d---g 160 (440)
.|+ .+.+|++....+.|..++.....+.. . + .....|.+ ++++.++.+|++ +.|.+.++. +
T Consensus 163 ~d~-~~~~~V~~~~~~~V~viD~~t~~v~~--------~--i-~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~ 230 (567)
T 1qks_A 163 WDL-ENLFSVTLRDAGQIALIDGSTYEIKT--------V--L-DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEP 230 (567)
T ss_dssp CCG-GGEEEEEETTTTEEEEEETTTCCEEE--------E--E-ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSC
T ss_pred cCC-CceEEEEeCCCCeEEEEECCCCeEEE--------E--E-eCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCC
Confidence 454 47899999988888776654332111 1 1 22346889 999999999998 689999994 3
Q ss_pred ceEEEEEcCCCCCceEEEEc----CCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC-----------ccCceEEEEe
Q psy14258 161 EHCMIAIDLNLSKPRGIALD----PTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK-----------IVYPYGVTVD 225 (440)
Q Consensus 161 ~~~~~~~~~~~~~P~~iavd----~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~-----------~~~P~gl~vD 225 (440)
+....+- .+ ..|++|+++ |..+++|.++... +.|...+.........+... ...+.++...
T Consensus 231 ~~v~~i~-~G-~~P~~ia~s~~~~pDGk~l~v~n~~~--~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 231 TTVAEIK-IG-SEARSIETSKMEGWEDKYAIAGAYWP--PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp CEEEEEE-CC-SEEEEEEECCSTTCTTTEEEEEEEET--TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred cEeEEEe-cC-CCCceeEEccccCCCCCEEEEEEccC--CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 3333332 22 469999999 5677999998776 47887765432222222211 1145677777
Q ss_pred CCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEec-CC-
Q psy14258 226 FPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIAN-FS- 301 (440)
Q Consensus 226 ~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~~-~~- 301 (440)
+....++++....+.|..+++.......+..-..-.+|.++.++. .++|.++..++.|..++..+++....+.- ..
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~ 386 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQT 386 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSS
T ss_pred CCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcC
Confidence 677788888888899999998654322222100134666666654 58999999999999999988876554433 22
Q ss_pred -CC-eEEEEeccCCCCCCCCCc-eeEEeec-CCccEEEEEEcCCCCCC---ceeeeeecCC-CCceEEEEEcCCCEEEEE
Q psy14258 302 -RP-FAIHIYHRQKQPDALKPS-TFLLYAK-GKPAIIKGLTFKRDGTT---EQAIMPITDL-KRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 302 -~p-~~~~v~~~~~qp~~~~~~-~~l~~~~-~~~~~I~~i~~~~~~~~---~~~~~~~~~~-~~p~~l~~d~~~~~vy~~ 373 (440)
+| .+..+++ |+ +.++++. ...+.|..|+.+..... -.+...+... ..+..|..++.+.++|++
T Consensus 387 Phpg~g~~~~~---------p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~ 457 (567)
T 1qks_A 387 PHPGRGANFVH---------PTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVD 457 (567)
T ss_dssp BCCTTCEEEEE---------TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEE
T ss_pred CCCccceeeEC---------CCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEe
Confidence 33 2555555 33 4566554 34478999988763211 1222222222 234678899999999887
Q ss_pred ECC------CCeEEEEecCCC-----Ce--EEEEE-------CCCCCeeeEEEecCCCcEEEEeC----CCCeEEEEEeC
Q psy14258 374 ELT------SYVIERRKMFGR-----GK--EVVID-------TGIYNVEGMAVDWMANNLYWTDA----GIGTINVAKIS 429 (440)
Q Consensus 374 d~~------~~~I~r~~~~g~-----~~--~~~~~-------~~~~~~~glAvD~~~~~lYwtd~----~~~~I~~~~~~ 429 (440)
... .++|..++.+.. .. +++.. .+-..|..++++..++.||++.. ..+.|.+++..
T Consensus 458 ~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~ 537 (567)
T 1qks_A 458 ATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDK 537 (567)
T ss_dssp CTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETT
T ss_pred cCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECC
Confidence 632 458999987643 21 33311 13357899999999999999964 36899998876
Q ss_pred CCeeeEE
Q psy14258 430 DFSIRKV 436 (440)
Q Consensus 430 g~~~~~~ 436 (440)
.....++
T Consensus 538 t~~~~~~ 544 (567)
T 1qks_A 538 TLELKHV 544 (567)
T ss_dssp TTEEEEE
T ss_pred CceEEEE
Confidence 5333333
No 90
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.33 E-value=3e-09 Score=102.76 Aligned_cols=277 Identities=11% Similarity=0.087 Sum_probs=163.2
Q ss_pred eeecCCcEEEe--------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC-------CCCcEEEEeCC
Q psy14258 140 FPMVTHKIVYP--------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA-------TRPMLERSLLD 204 (440)
Q Consensus 140 vD~~~~~lY~~--------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~-------~~~~I~r~~~d 204 (440)
.++.++.+|++ ++|.+.+.+......-+..+ ..|. |+++|...+||.++... ....|.+.+..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 34567788988 36888888765543333333 3475 99999988999998420 00357777776
Q ss_pred CCCceeEEecC-------ccCceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCC-cEEEecCCccCceeeeeEecCEEEE
Q psy14258 205 GTERFPMVTHK-------IVYPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFENNLFV 275 (440)
Q Consensus 205 G~~~~~l~~~~-------~~~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~~ly~ 275 (440)
......-+..+ ...|.++++++.+++||+++.. .+.|..+|..... ...+.. ....++.-.+.+.|+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v----~g~~~~~P~g~~~~~ 193 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV----PDCYHIFPTAPDTFF 193 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC----CSEEEEEEEETTEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC----CCcceeecCCCceeE
Confidence 43322222111 2379999999999999999874 6889999876443 333322 111222212223333
Q ss_pred EecCCCeEEEEeccC-CCceEEEecCCCCeEEEEeccCCCCCCCC-----Cce-eEEeecCCccEEEEEEcCCCCCCcee
Q psy14258 276 TSWRNQSIIRVNKFN-SDDYETIANFSRPFAIHIYHRQKQPDALK-----PST-FLLYAKGKPAIIKGLTFKRDGTTEQA 348 (440)
Q Consensus 276 td~~~~~i~~~~~~~-g~~~~~~~~~~~p~~~~v~~~~~qp~~~~-----~~~-~l~~~~~~~~~I~~i~~~~~~~~~~~ 348 (440)
+....+++..++..+ ++...... +++.+...|...+ +++ ++|++.. +.|+.+++.+. ... .
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~--------~~~~~~~~~~~~~~~~~~~dG~~~~vs~~--g~V~v~d~~~~-~~~-v 261 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHT--------EVFHPEDEFLINHPAYSQKAGRLVWPTYT--GKIHQIDLSSG-DAK-F 261 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEEC--------CCCSCTTSCBCSCCEEETTTTEEEEEBTT--SEEEEEECTTS-SCE-E
T ss_pred EECCCCCEEEEECCCCCeEEEeec--------ceeccccccccccceeEcCCCcEEEEeCC--CEEEEEECCCC-cce-e
Confidence 433444444444433 22211110 1122222222211 244 5666665 88999998765 111 1
Q ss_pred eeeec--------CCCCce---EEEEEcCCCEEEEEEC---------CCCeEEEEecCCCCeEEEEECCCCCeeeEEEec
Q psy14258 349 IMPIT--------DLKRPS---VIDYHEKEEYIYYAEL---------TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDW 408 (440)
Q Consensus 349 ~~~~~--------~~~~p~---~l~~d~~~~~vy~~d~---------~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~ 408 (440)
..++. .--.|. .+++++.++++|++.. ..++|..+++.......-+..+ ..|.+|+++.
T Consensus 262 ~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~ 340 (386)
T 3sjl_D 262 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQ 340 (386)
T ss_dssp CCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECS
T ss_pred ecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECC
Confidence 11111 001122 4788999999999963 2478999999865433322222 3689999999
Q ss_pred CCC-cEEEEeCCCCeEEEEEeCCCeeeE
Q psy14258 409 MAN-NLYWTDAGIGTINVAKISDFSIRK 435 (440)
Q Consensus 409 ~~~-~lYwtd~~~~~I~~~~~~g~~~~~ 435 (440)
.++ .||.++...+.|.+++.......+
T Consensus 341 D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 341 DEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 887 689999999999999986533333
No 91
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.33 E-value=1.3e-10 Score=111.14 Aligned_cols=209 Identities=11% Similarity=0.101 Sum_probs=133.6
Q ss_pred eEEEEEcCCCCCceEEEEcCCCCeEEEEEc--C--------CCCCcEEEEeCCCC--CceeEEecC------ccCceEEE
Q psy14258 162 HCMIAIDLNLSKPRGIALDPTSGYMFFTKW--G--------ATRPMLERSLLDGT--ERFPMVTHK------IVYPYGVT 223 (440)
Q Consensus 162 ~~~~~~~~~~~~P~~iavd~~~g~lywtd~--~--------~~~~~I~r~~~dG~--~~~~l~~~~------~~~P~gl~ 223 (440)
.|+.| ......|++|+++| +|.+|.+.. . ...++|.+.+++.. ..+.+...+ ..+|.||.
T Consensus 41 ~C~~i-~~~~~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~ 118 (355)
T 3sre_A 41 NCNLV-KGIDNGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIS 118 (355)
T ss_dssp CEEEC-TTCCSCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEE
T ss_pred CCEEe-CCCCCCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeE
Confidence 56554 32245799999998 799999961 1 01278999999843 222332222 25899999
Q ss_pred EeC---CCCEEEEEeCC--CCcEEEEEc--cCCCcEEEec--CCccCceeeeeEecC-EEEEEecC--CCeEEEEeccCC
Q psy14258 224 VDF---PTKHVYWVDTY--LDFIDRINY--DGTDRKTIRK--GFPVQNLYDITVFEN-NLFVTSWR--NQSIIRVNKFNS 291 (440)
Q Consensus 224 vD~---~~~~ly~~d~~--~~~i~~~~~--dG~~~~~i~~--~~~~~~p~gl~~~~~-~ly~td~~--~~~i~~~~~~~g 291 (440)
+.. .+.+||++++. .+.|+...+ ++.....+.. +..+..|..++++.+ .+|+++.. +...+
T Consensus 119 ~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~------- 191 (355)
T 3sre_A 119 TFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYL------- 191 (355)
T ss_dssp EEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHH-------
T ss_pred EEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccc-------
Confidence 964 24589999987 446555554 4443333322 445788999999865 88888641 11000
Q ss_pred CceEEEecCCCCeEEEEecc-CCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEE
Q psy14258 292 DDYETIANFSRPFAIHIYHR-QKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYI 370 (440)
Q Consensus 292 ~~~~~~~~~~~p~~~~v~~~-~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~v 370 (440)
+ .... ..+ ..+.|++++.. .......++..|.||+++++++.+
T Consensus 192 -------------~--~~e~~~~~---------------~~g~vyr~d~~------~~~~~~~~l~~pNGia~spDg~~l 235 (355)
T 3sre_A 192 -------------K--SWEMHLGL---------------AWSFVTYYSPN------DVRVVAEGFDFANGINISPDGKYV 235 (355)
T ss_dssp -------------H--HHHHHTTC---------------CCEEEEEECTT------CCEEEEEEESSEEEEEECTTSSEE
T ss_pred -------------c--cchhhccC---------------CccEEEEEECC------eEEEeecCCcccCcceECCCCCEE
Confidence 0 0000 001 11556665542 123345667789999999999999
Q ss_pred EEEECCCCeEEEEecCCCC----eEEEEECCCCCeeeEEEecCCCcEEEEe
Q psy14258 371 YYAELTSYVIERRKMFGRG----KEVVIDTGIYNVEGMAVDWMANNLYWTD 417 (440)
Q Consensus 371 y~~d~~~~~I~r~~~~g~~----~~~~~~~~~~~~~glAvD~~~~~lYwtd 417 (440)
|++|+..++|++.++++.+ ++++ .. -..|+||++|...|+||.+.
T Consensus 236 Yvadt~~~~I~~~~~~~~g~l~~~~~~-~~-~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 236 YIAELLAHKIHVYEKHANWTLTPLRVL-SF-DTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEE-EC-SSEEEEEEECTTTCCEEEEE
T ss_pred EEEeCCCCeEEEEEECCCCcEecCEEE-eC-CCCCceEEEeCCCCcEEEEe
Confidence 9999999999999987432 3344 33 36899999996447899964
No 92
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.32 E-value=2.3e-10 Score=113.88 Aligned_cols=288 Identities=13% Similarity=-0.012 Sum_probs=168.0
Q ss_pred cccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeecccccccee-eccccccce-eeeec---CCcEEEe--
Q psy14258 78 TFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPML-ERSLLDGTE-RFPMV---THKIVYP-- 150 (440)
Q Consensus 78 ~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~p~~-avD~~---~~~lY~~-- 150 (440)
+.. |.+|++++. ++||+++...++|+++.......+.+. ..+.+.. ..+...+.| |+++. ++.||++
T Consensus 26 l~~--P~~~a~~pd-G~l~V~e~~gg~I~~~~~~~g~~~~~~---~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s 99 (454)
T 1cru_A 26 LNK--PHALLWGPD-NQIWLTERATGKILRVNPESGSVKTVF---QVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGT 99 (454)
T ss_dssp CSS--EEEEEECTT-SCEEEEETTTCEEEEECTTTCCEEEEE---ECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CCC--ceEEEEcCC-CcEEEEEcCCCEEEEEECCCCcEeEEe---cCCccccccCCCCceeEEEECCCcCcCCEEEEEEe
Confidence 555 999999986 679999988777887764322222110 0011100 013345669 99987 8899998
Q ss_pred c--------------eEEEEecCC-----ceEEEEEc----CCCCCceEEEEcCCCCeEEEEEcCC--------------
Q psy14258 151 E--------------AIYFCTHYM-----EHCMIAID----LNLSKPRGIALDPTSGYMFFTKWGA-------------- 193 (440)
Q Consensus 151 ~--------------~I~~~~~dg-----~~~~~~~~----~~~~~P~~iavd~~~g~lywtd~~~-------------- 193 (440)
. +|.+..+++ ...++++. ...+.+.+|+++| .|+||++....
T Consensus 100 ~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~ 178 (454)
T 1cru_A 100 FKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQA 178 (454)
T ss_dssp EECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCT
T ss_pred ccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCcccccccccc
Confidence 2 588887654 23445553 2346799999999 68999995421
Q ss_pred ----------------CCCcEEEEeCCCCC----------ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc
Q psy14258 194 ----------------TRPMLERSLLDGTE----------RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD 247 (440)
Q Consensus 194 ----------------~~~~I~r~~~dG~~----------~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d 247 (440)
..++|.|++.||+. +.+++..++..|.||++|+ +++||.+|.+.+.-..++
T Consensus 179 ~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp-~G~L~~~d~g~~~~dein-- 255 (454)
T 1cru_A 179 QHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTP-NGKLLQSEQGPNSDDEIN-- 255 (454)
T ss_dssp TCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECT-TSCEEEEEECSSSCEEEE--
T ss_pred ccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECC-CCCEEEEecCCCCCeEEE--
Confidence 03689999999983 3457777889999999997 799999997655322222
Q ss_pred CCCcEEEecCCccCceeee--eEecCEEEE--E----------ecCCCeEE----EEe----ccCC--CceEEE------
Q psy14258 248 GTDRKTIRKGFPVQNLYDI--TVFENNLFV--T----------SWRNQSII----RVN----KFNS--DDYETI------ 297 (440)
Q Consensus 248 G~~~~~i~~~~~~~~p~gl--~~~~~~ly~--t----------d~~~~~i~----~~~----~~~g--~~~~~~------ 297 (440)
.+..+.....|..- .-...+.|+ + ++....|- ... ...+ .....+
T Consensus 256 -----~i~~G~nYGWP~~~G~~~~~~~~~~~~~~~~~~~~~~~~y~~~~i~~~~p~~~~~~~~~~~~~~P~~~~~~~~~~ 330 (454)
T 1cru_A 256 -----LIVKGGNYGWPNVAGYKDDSGYAYANYSAAANKSIKDLAQNGVKVAAGVPVTKESEWTGKNFVPPLKTLYTVQDT 330 (454)
T ss_dssp -----ECCTTCBCCTTTCSSSSSCSSCCEECGGGSSCTTCCCCCSTTSSCCTTCCEECGGGCCCSSBCCCSEEECCCCTT
T ss_pred -----EecCCCCCCCCceecCcccCccccccccccccccccccccCCcccCccccccccccccCCCcCCCceeccccccc
Confidence 11122222233211 000011121 0 00000000 000 0000 000010
Q ss_pred ---------------ecCCCCeEEEEeccC-CCCCCCCCceeEEeecCCccEEEEEEcCCCCCC--ceeeeeecCCCCce
Q psy14258 298 ---------------ANFSRPFAIHIYHRQ-KQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTT--EQAIMPITDLKRPS 359 (440)
Q Consensus 298 ---------------~~~~~p~~~~v~~~~-~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~--~~~~~~~~~~~~p~ 359 (440)
..-..|.++.++... ..|. .-++-||+++-..++|.++.++..+.. .+....+....+|+
T Consensus 331 ~~~~~~~~G~~~~~~~~~~ap~G~~fy~g~~~~~~--~~~g~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~ 408 (454)
T 1cru_A 331 YNYNDPTCGEMTYICWPTVAPSSAYVYKGGKKAIT--GWENTLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYR 408 (454)
T ss_dssp CCSCCGGGTTCGGGGSSCCCBCCCEECCCCTTCCT--TCTTEEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEE
T ss_pred ccccccccccccccccCccCcceeEEeCCCCccCc--ccCCcEEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCce
Confidence 011247788877544 2221 124678888877789999999865321 12122233456999
Q ss_pred EEEEEcCCCEEEEEECCCCeEEE
Q psy14258 360 VIDYHEKEEYIYYAELTSYVIER 382 (440)
Q Consensus 360 ~l~~d~~~~~vy~~d~~~~~I~r 382 (440)
.|++++++..||+++...+.|++
T Consensus 409 dv~~gpDG~~Lyv~~d~~G~i~~ 431 (454)
T 1cru_A 409 DVIASPDGNVLYVLTDTAGNVQK 431 (454)
T ss_dssp EEEECTTSSCEEEEECSSCCEEC
T ss_pred eEEECCCCCEEEEEECCCCCCcc
Confidence 99999965459999987888876
No 93
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.32 E-value=6.8e-09 Score=97.96 Aligned_cols=259 Identities=7% Similarity=-0.002 Sum_probs=164.2
Q ss_pred ceEEEEecCCceEEEEEcCCCC--CceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC-----ccCceEEE
Q psy14258 151 EAIYFCTHYMEHCMIAIDLNLS--KPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK-----IVYPYGVT 223 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~~~~~--~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~-----~~~P~gl~ 223 (440)
+.|.+.++........+..... .|.+++++|...+||++.... ..|...++........+... ...|.+++
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS--ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAA 88 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT--TEEEEEETTTCCEEEEEECCBTTEEEECTTCEE
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC--CeEEEEECCCCCeEeeEEcCCcccccccccceE
Confidence 6788888865444333332211 599999999766899998765 58999998654433223221 12688999
Q ss_pred EeCCCCEEEEEeC-----------CCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccC
Q psy14258 224 VDFPTKHVYWVDT-----------YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFN 290 (440)
Q Consensus 224 vD~~~~~ly~~d~-----------~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~ 290 (440)
+++.+++||+++. ..+.|..+++.+......... -..|.++++..+ .||++ ++.|..++..+
T Consensus 89 ~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~ 163 (337)
T 1pby_B 89 LSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA--PRQITMLAWARDGSKLYGL---GRDLHVMDPEA 163 (337)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC--CSSCCCEEECTTSSCEEEE---SSSEEEEETTT
T ss_pred ECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC--CCCcceeEECCCCCEEEEe---CCeEEEEECCC
Confidence 9988889999962 247899998865443322222 245788887643 78888 46788888877
Q ss_pred CCceEEEecCC--CCeEEEEeccCCCCCCCCCc-eeEEeecCCcc-----------------------EEEEEEcCCCCC
Q psy14258 291 SDDYETIANFS--RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPA-----------------------IIKGLTFKRDGT 344 (440)
Q Consensus 291 g~~~~~~~~~~--~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~-----------------------~I~~i~~~~~~~ 344 (440)
++....+.... .|.. + .|+ .+|+++....+ .|..+++... .
T Consensus 164 ~~~~~~~~~~~~~~~~~---~---------s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~ 230 (337)
T 1pby_B 164 GTLVEDKPIQSWEAETY---A---------QPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETG-E 230 (337)
T ss_dssp TEEEEEECSTTTTTTTB---C---------CCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTC-C
T ss_pred CcEeeeeeccccCCCce---e---------CCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCC-C
Confidence 65544333211 2221 1 122 22333222111 4566666554 1
Q ss_pred Cceeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeE
Q psy14258 345 TEQAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTI 423 (440)
Q Consensus 345 ~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I 423 (440)
.. .++.. ....|.++++++.++++|++ .+.|+..++........+..+ ..|.++++++.++.||.+ ...+.|
T Consensus 231 ~~--~~~~~~~~~~~~~~~~s~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~-~~~~~i 303 (337)
T 1pby_B 231 MA--MREVRIMDVFYFSTAVNPAKTRAFGA---YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLG-GALGDL 303 (337)
T ss_dssp EE--EEEEEECSSCEEEEEECTTSSEEEEE---ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEE-SBSSEE
T ss_pred ce--EeecCCCCCceeeEEECCCCCEEEEe---CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEE-cCCCcE
Confidence 11 22221 22468899999999999999 489999998764433333433 579999999988889988 457899
Q ss_pred EEEEeCCCeeeEE
Q psy14258 424 NVAKISDFSIRKV 436 (440)
Q Consensus 424 ~~~~~~g~~~~~~ 436 (440)
.+.++...+..+.
T Consensus 304 ~v~d~~~~~~~~~ 316 (337)
T 1pby_B 304 AAYDAETLEKKGQ 316 (337)
T ss_dssp EEEETTTCCEEEE
T ss_pred EEEECcCCcEEEE
Confidence 9999875343433
No 94
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.32 E-value=1.6e-09 Score=98.78 Aligned_cols=199 Identities=14% Similarity=0.139 Sum_probs=135.8
Q ss_pred cCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceE
Q psy14258 217 VYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 217 ~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
..+.|||+|+.+++||.+....+.|..++.+|.-...+..+ ....+.||++.++ .+++++-..++++.+.........
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~-g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLD-FVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECS-SCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecC-CCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 46899999999999998777788999999997766666442 2578999999876 766888778888877654433322
Q ss_pred E---Ee-cC-CCC-----eEEEEeccCCCCCCCCCc-eeEEeecCC-ccEEEEEEcCCCCCCceeeee-------ecCCC
Q psy14258 296 T---IA-NF-SRP-----FAIHIYHRQKQPDALKPS-TFLLYAKGK-PAIIKGLTFKRDGTTEQAIMP-------ITDLK 356 (440)
Q Consensus 296 ~---~~-~~-~~p-----~~~~v~~~~~qp~~~~~~-~~l~~~~~~-~~~I~~i~~~~~~~~~~~~~~-------~~~~~ 356 (440)
. .. .+ ..| .+++.. |+ ..|+++..+ +..|+.++ +.-......+. ...+.
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d----------~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~~~~~~ 173 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYS----------RQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQRQFTLD 173 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEE----------TTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHHTCCSS
T ss_pred eeeeeccccccccccCCcceEEEe----------CCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhccccccC
Confidence 1 11 11 122 455554 22 356666554 44777776 21011111211 01244
Q ss_pred CceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEEC-C-------CCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 357 RPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDT-G-------IYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 357 ~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~-~-------~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
.+.+|+||+..+++|+.+..++.+..++.+|.......-. + +..|+|||+|. .|+||++.- -|.+.+++.
T Consensus 174 d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~-~G~lyIvsE-~n~~y~f~~ 251 (255)
T 3qqz_A 174 DVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDA-SGNIYIVSE-PNRFYRFTP 251 (255)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECT-TCCEEEEET-TTEEEEEEC
T ss_pred CceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECC-CCCEEEEcC-CceEEEEEe
Confidence 7899999999999999999999999999998644433322 2 35899999997 558999965 468999987
Q ss_pred CC
Q psy14258 429 SD 430 (440)
Q Consensus 429 ~g 430 (440)
.+
T Consensus 252 ~~ 253 (255)
T 3qqz_A 252 QS 253 (255)
T ss_dssp --
T ss_pred cC
Confidence 64
No 95
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.31 E-value=4.3e-09 Score=101.64 Aligned_cols=247 Identities=11% Similarity=0.052 Sum_probs=157.4
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC--CCCCceeEEec-CccCceEEEEeCCCCEEE--EEe-------C-
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL--DGTERFPMVTH-KIVYPYGVTVDFPTKHVY--WVD-------T- 236 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~--dG~~~~~l~~~-~~~~P~gl~vD~~~~~ly--~~d-------~- 236 (440)
....|..++++|...+||.++.+ .|...++ +|.... +... ....|..+++++.+++|| .++ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~----~v~~~~~~~~g~~~~-~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK----KWSSFAVKSPTEIVH-EASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT----EEEEEEEEETTEEEE-EEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc----eEEEEEECCCCCEEE-eeEeecCCCCccEEECCCCCEEEEEEecCCcceeccc
Confidence 44689999999977779988875 5665555 453221 2221 113588899997777544 343 1
Q ss_pred ----CCCcEEEEEcc--CCCcEEEec--CCccCceeeeeEecC--EEEEEecCCCeEEEEecc-CCCceEE--Ee--c-C
Q psy14258 237 ----YLDFIDRINYD--GTDRKTIRK--GFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKF-NSDDYET--IA--N-F 300 (440)
Q Consensus 237 ----~~~~i~~~~~d--G~~~~~i~~--~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~-~g~~~~~--~~--~-~ 300 (440)
..+.+...+++ |.....+.. .....+|.++++..+ .||.++...+.|..++.. +|+...+ +. . .
T Consensus 113 ~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp EESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred eeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 35566666664 443322221 112467999998754 899999888899888876 5654322 22 1 2
Q ss_pred CCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCC-CCCce--eeee-ecC----CC-------CceEEE-E
Q psy14258 301 SRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRD-GTTEQ--AIMP-ITD----LK-------RPSVID-Y 363 (440)
Q Consensus 301 ~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~-~~~~~--~~~~-~~~----~~-------~p~~l~-~ 363 (440)
..|.++.+. |+ .+|+++....+.|..+.++.. +.... ..+. +.. .. .|.+++ +
T Consensus 193 ~~p~~~~~s----------pdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~ 262 (365)
T 1jof_A 193 DHPRWVAMH----------PTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCAL 262 (365)
T ss_dssp CCEEEEEEC----------TTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEE
T ss_pred CCCCEeEEC----------CCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEE
Confidence 357777654 34 478887765578887777642 11110 0111 111 11 478999 9
Q ss_pred EcCCCEEEEEECCCC-----eEEEEecCCCC-eEE---EEECCCCCeeeEEEec---CCCcEEEEeCCCCeEEEEEeCCC
Q psy14258 364 HEKEEYIYYAELTSY-----VIERRKMFGRG-KEV---VIDTGIYNVEGMAVDW---MANNLYWTDAGIGTINVAKISDF 431 (440)
Q Consensus 364 d~~~~~vy~~d~~~~-----~I~r~~~~g~~-~~~---~~~~~~~~~~glAvD~---~~~~lYwtd~~~~~I~~~~~~g~ 431 (440)
++++++||+++...+ +|...+++.++ .+. .+...-..|.++|+++ .++.||.++...++|.+++++++
T Consensus 263 spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 263 TFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp CTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 999999999987655 78877775222 222 2232335689999999 69999999988899999999884
No 96
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.31 E-value=6.9e-10 Score=101.17 Aligned_cols=195 Identities=10% Similarity=0.048 Sum_probs=133.9
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFC 156 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~ 156 (440)
++.|+++++..++||.+....++|+++++.+.-.+. +.+ .+...++| |++.. +.+|++ +++.+.
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~---------i~l-~g~~D~EGIa~~~~-g~~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRT---------IPL-DFVKDLETIEYIGD-NQFVISDERDYAIYVI 96 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEE---------EEC-SSCSSEEEEEECST-TEEEEEETTTTEEEEE
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEE---------Eec-CCCCChHHeEEeCC-CEEEEEECCCCcEEEE
Confidence 399999999999999876667889988877432221 112 45678999 99843 334455 577777
Q ss_pred ecCCceE-E--EEEcCCC-CCc-----eEEEEcCCCCeEEEEEcCCCCCcEEEEe--CCCCCceeEEec-------CccC
Q psy14258 157 THYMEHC-M--IAIDLNL-SKP-----RGIALDPTSGYMFFTKWGATRPMLERSL--LDGTERFPMVTH-------KIVY 218 (440)
Q Consensus 157 ~~dg~~~-~--~~~~~~~-~~P-----~~iavd~~~g~lywtd~~~~~~~I~r~~--~dG~~~~~l~~~-------~~~~ 218 (440)
.++.... . ......+ ..| .|||+||..+.||.+..... ..|++.+ +.+... .+... .+..
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l-~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNEL-HISKDKALQRQFTLDD 174 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCC-EEEECHHHHHTCCSSC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCce-eeecchhhccccccCC
Confidence 6654321 1 1111122 234 99999998889999886652 3788877 122222 23221 3557
Q ss_pred ceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-------CccCceeeeeEecC-EEEEEecCCCeEEEEeccC
Q psy14258 219 PYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG-------FPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFN 290 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~-------~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~ 290 (440)
+.+|++|+.+++||+.......+..++.+|.-+..+.-. ..+++|.||+++.+ +||++.-. +.++++.+..
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~-n~~y~f~~~~ 253 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP-NRFYRFTPQS 253 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT-TEEEEEEC--
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC-ceEEEEEecC
Confidence 899999999999999999999999999999844443322 12468999999976 99999754 6888888754
No 97
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.30 E-value=5.4e-10 Score=111.25 Aligned_cols=149 Identities=11% Similarity=0.118 Sum_probs=105.7
Q ss_pred eeccccccce-eeeecCCcEEEe----ceEEEEecC-CceEEEE-EcC------CCCCceEEEEcCC---CCeEEEEEcC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHY-MEHCMIA-IDL------NLSKPRGIALDPT---SGYMFFTKWG 192 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~d-g~~~~~~-~~~------~~~~P~~iavd~~---~g~lywtd~~ 192 (440)
+.+++..|.+ |+++.++ ||++ ++|.+.+.+ |....+. +.. ...-+.|||++|. +|+||++...
T Consensus 22 ~a~~l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 22 ILSNLNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp EECCCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred EECCCCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 4567999999 9998765 9999 379998764 5543322 122 2344669999997 8999999853
Q ss_pred C------C----CCcEEEEeCCCC-----CceeEEe----cCccCceEEEEeCCCCEEEEEeCC----------------
Q psy14258 193 A------T----RPMLERSLLDGT-----ERFPMVT----HKIVYPYGVTVDFPTKHVYWVDTY---------------- 237 (440)
Q Consensus 193 ~------~----~~~I~r~~~dG~-----~~~~l~~----~~~~~P~gl~vD~~~~~ly~~d~~---------------- 237 (440)
. . ..+|.|..+++. ..++++. .....+.+|++++ .++||++...
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~Gd~~~~~~~~~~~~~~~~ 179 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIGDQGRNQLAYLFLPNQAQ 179 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEECCTTTTSGGGTTSCCCTT
T ss_pred cccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEECCCCCCCccccccccccc
Confidence 0 0 148999988653 2344443 1245699999995 5689998431
Q ss_pred ----------------CCcEEEEEccCC-----------CcEEEecCCccCceeeeeEec-CEEEEEecCCC
Q psy14258 238 ----------------LDFIDRINYDGT-----------DRKTIRKGFPVQNLYDITVFE-NNLFVTSWRNQ 281 (440)
Q Consensus 238 ----------------~~~i~~~~~dG~-----------~~~~i~~~~~~~~p~gl~~~~-~~ly~td~~~~ 281 (440)
.++|.+++.||+ ..++...+ +++|+|++++. +.||.++...+
T Consensus 180 ~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G--~RNp~gla~dp~G~L~~~d~g~~ 249 (454)
T 1cru_A 180 HTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG--HRNPQGLAFTPNGKLLQSEQGPN 249 (454)
T ss_dssp CCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC--CSEEEEEEECTTSCEEEEEECSS
T ss_pred cccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC--CCCcceEEECCCCCEEEEecCCC
Confidence 368999999997 34555555 89999999985 58999996543
No 98
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.29 E-value=2e-09 Score=100.84 Aligned_cols=233 Identities=14% Similarity=0.094 Sum_probs=159.1
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC-------ccCceEEEE---eCCCCEEEE-EeC
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK-------IVYPYGVTV---DFPTKHVYW-VDT 236 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~-------~~~P~gl~v---D~~~~~ly~-~d~ 236 (440)
....-.|++++.|+.+|.+|+++... ++|.+.++++...+.+.... ...|.||.+ |+. ++|++ ++.
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~--g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~-grL~vv~~~ 85 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYK--GRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNS-KRLFAVMKN 85 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTT--TEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSC-CEEEEEEEE
T ss_pred cCcccCCcCccCcCCCCEEEEEeccC--CEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCC-CcEEEEEcc
Confidence 34556899999999999999999876 69999999866555442222 236899999 766 88988 552
Q ss_pred ------------CCCcEEEEEcc----CCCcEEEecC-----------CccCceeeeeEecC-EEEEEecCC-CeEEEEe
Q psy14258 237 ------------YLDFIDRINYD----GTDRKTIRKG-----------FPVQNLYDITVFEN-NLFVTSWRN-QSIIRVN 287 (440)
Q Consensus 237 ------------~~~~i~~~~~d----G~~~~~i~~~-----------~~~~~p~gl~~~~~-~ly~td~~~-~~i~~~~ 287 (440)
+...+.+++++ |.....+... .....|.+|+++.+ ++|+++... +.|++++
T Consensus 86 ~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 86 AKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp TTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred cccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 35679999988 5544444311 01235889999976 999999988 9999999
Q ss_pred ccCCCceEEEe-cCC------CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeec------
Q psy14258 288 KFNSDDYETIA-NFS------RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT------ 353 (440)
Q Consensus 288 ~~~g~~~~~~~-~~~------~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~------ 353 (440)
+. |+....+. ... .+.||++. |+ ..|+++++ .+++.+++++.. .. ..+++.
T Consensus 166 pd-G~~~~~~~~~~~~~~~~~G~nGIv~~----------pdg~~Liv~~~-~g~L~~fD~~~p-v~--~~v~~~~~G~~~ 230 (334)
T 2p9w_A 166 AD-GKTVSTFAWESGNGGQRPGYSGITFD----------PHSNKLIAFGG-PRALTAFDVSKP-YA--WPEPVKINGDFG 230 (334)
T ss_dssp TT-SCCEEEEEECCCCSSSCCSCSEEEEE----------TTTTEEEEESS-SSSEEEEECSSS-SC--CCEECEESSCCC
T ss_pred CC-CCEEeeeeecCCCcccccCcceEEEe----------CCCCEEEEEcC-CCeEEEEcCCCC-cc--eeecccccCCcc
Confidence 95 54444322 111 25577655 45 45777777 799999998843 11 124443
Q ss_pred CCCCceEE-EEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE---CCCCCeeeEEEe-----cCCCcEEEEeCC
Q psy14258 354 DLKRPSVI-DYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID---TGIYNVEGMAVD-----WMANNLYWTDAG 419 (440)
Q Consensus 354 ~~~~p~~l-~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~---~~~~~~~glAvD-----~~~~~lYwtd~~ 419 (440)
.+..|.+| +....+.-+++++...+.+...+.||=....+.. ..+. +.|++++ -.+++||..+..
T Consensus 231 ~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 231 TLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECC
T ss_pred cccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeee
Confidence 35567885 6666666669999888888888888832222222 1223 7899988 457899999854
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.29 E-value=3.6e-09 Score=95.97 Aligned_cols=192 Identities=15% Similarity=0.134 Sum_probs=133.8
Q ss_pred ceEEEEeCCCCEEEEEeCCC--CcEEEEEccCCC-cEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 219 PYGVTVDFPTKHVYWVDTYL--DFIDRINYDGTD-RKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~--~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
-.||+++ +++||.+.... +.|..+++.... ...+..+. -....|+++.++.||.+.|..+.++.+|..+.+...
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 3799998 57999998654 489999986443 33333221 223467899999999999999999999998888776
Q ss_pred EEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC----CCCceEEEEEcCCCEEE
Q psy14258 296 TIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD----LKRPSVIDYHEKEEYIY 371 (440)
Q Consensus 296 ~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~----~~~p~~l~~d~~~~~vy 371 (440)
.+.-...+.++.-. ...|+++++ .++|..++...- . ....+++.. +..+..+++. +++||
T Consensus 122 ti~~~~eG~glt~d-----------g~~L~~SdG-s~~i~~iDp~T~-~-v~~~I~V~~~g~~~~~lNELe~~--~G~ly 185 (262)
T 3nol_A 122 SFNYDGEGWGLTHN-----------DQYLIMSDG-TPVLRFLDPESL-T-PVRTITVTAHGEELPELNELEWV--DGEIF 185 (262)
T ss_dssp EEECSSCCCCEEEC-----------SSCEEECCS-SSEEEEECTTTC-S-EEEEEECEETTEECCCEEEEEEE--TTEEE
T ss_pred EEECCCCceEEecC-----------CCEEEEECC-CCeEEEEcCCCC-e-EEEEEEeccCCccccccceeEEE--CCEEE
Confidence 55533345555432 356888886 478888887654 1 112233321 2234456665 78999
Q ss_pred EEECCCCeEEEEecCCCCeEEEEEC-CC-----------CCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 372 YAELTSYVIERRKMFGRGKEVVIDT-GI-----------YNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 372 ~~d~~~~~I~r~~~~g~~~~~~~~~-~~-----------~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
.+...++.|.++++........+.. ++ +.|.|||+|+.+++||+|.-.=..+..+++.
T Consensus 186 an~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 186 ANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp EEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred EEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceEEEEEe
Confidence 9998999999999975544444442 22 4689999999999999998665666666654
No 100
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.27 E-value=1.3e-08 Score=91.60 Aligned_cols=196 Identities=13% Similarity=0.108 Sum_probs=136.9
Q ss_pred ccCceEEEEeCCCCEEEEEeCCC--CcEEEEEccCCCc-EEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCC
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYL--DFIDRINYDGTDR-KTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSD 292 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~--~~i~~~~~dG~~~-~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~ 292 (440)
-..-.||++| +++||.+.... +.|..+++....+ ..+.-.. -....|+++.+++||...|.++.++.++..+.+
T Consensus 20 ~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~-~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 20 TAFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPP-PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp TCCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred ccccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCC-CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 3456799998 48999997653 5999999865443 3332221 234578899999999999999999999998887
Q ss_pred ceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC----CCCceEEEEEcCCC
Q psy14258 293 DYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD----LKRPSVIDYHEKEE 368 (440)
Q Consensus 293 ~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~----~~~p~~l~~d~~~~ 368 (440)
....+.....+.++.-. ...|+++++ .+.|..++...- .. ...+++.. +..+..+++ .++
T Consensus 97 ~~~ti~~~~~Gwglt~d-----------g~~L~vSdg-s~~l~~iDp~t~-~~-~~~I~V~~~g~~~~~lNeLe~--~~G 160 (243)
T 3mbr_X 97 PRARFRYPGEGWALTSD-----------DSHLYMSDG-TAVIRKLDPDTL-QQ-VGSIKVTAGGRPLDNLNELEW--VNG 160 (243)
T ss_dssp EEEEEECSSCCCEEEEC-----------SSCEEEECS-SSEEEEECTTTC-CE-EEEEECEETTEECCCEEEEEE--ETT
T ss_pred EEEEEeCCCCceEEeeC-----------CCEEEEECC-CCeEEEEeCCCC-eE-EEEEEEccCCcccccceeeEE--eCC
Confidence 77665543456666532 356899986 578888887654 11 12233321 123445554 488
Q ss_pred EEEEEECCCCeEEEEecCCCCeEEEEE-C------------CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 369 YIYYAELTSYVIERRKMFGRGKEVVID-T------------GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 369 ~vy~~d~~~~~I~r~~~~g~~~~~~~~-~------------~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+||.+...++.|.++++........+. . ..+-++|||+|+.+++||+|.-.=..+..+++..
T Consensus 161 ~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 161 ELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp EEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEEEEEECC
T ss_pred EEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEEEEEEec
Confidence 999888889999999997544433333 1 1246899999999999999986666777777654
No 101
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.27 E-value=3.4e-09 Score=96.13 Aligned_cols=190 Identities=10% Similarity=0.063 Sum_probs=135.6
Q ss_pred ceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 219 PYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
-.||+++ +++||.+....+.|..+++. |.-...++.. -....|+++.++.||.+.|..+.++.++..+.+....+
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~--~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWMERLG--NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEEECT--TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEECCC--CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 3699997 68999999998899999985 4445555222 22446699999999999999999999999888777665
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC----CCCceEEEEEcCCCEEEEE
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD----LKRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~----~~~p~~l~~d~~~~~vy~~ 373 (440)
.-...+.++.-. ...|+++++ .++|..++...- .. ...+++.. +..+..+++. +++||.+
T Consensus 133 ~~~~eGwGLt~D-----------g~~L~vSdG-s~~l~~iDp~T~-~v-~~~I~V~~~g~~v~~lNeLe~~--dG~lyan 196 (268)
T 3nok_A 133 RYSGEGWGLCYW-----------NGKLVRSDG-GTMLTFHEPDGF-AL-VGAVQVKLRGQPVELINELECA--NGVIYAN 196 (268)
T ss_dssp ECSSCCCCEEEE-----------TTEEEEECS-SSEEEEECTTTC-CE-EEEEECEETTEECCCEEEEEEE--TTEEEEE
T ss_pred eCCCceeEEecC-----------CCEEEEECC-CCEEEEEcCCCC-eE-EEEEEeCCCCcccccccccEEe--CCEEEEE
Confidence 543345666533 357899985 588988887654 11 11233321 2234556655 7899999
Q ss_pred ECCCCeEEEEecCCCCeEEEEECC-------------CCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 374 ELTSYVIERRKMFGRGKEVVIDTG-------------IYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 374 d~~~~~I~r~~~~g~~~~~~~~~~-------------~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
...++.|.++++........+... .+-+.|||+|+.+++||+|.-.=..+..+++
T Consensus 197 vw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 197 IWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp ETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred ECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 888999999999754443333321 2478999999999999999765556666555
No 102
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.26 E-value=2e-08 Score=95.29 Aligned_cols=270 Identities=11% Similarity=0.037 Sum_probs=161.8
Q ss_pred eeeecCCcEEEe----ceEEEEecCCceEEEEEc-CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe
Q psy14258 139 RFPMVTHKIVYP----EAIYFCTHYMEHCMIAID-LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT 213 (440)
Q Consensus 139 avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~-~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~ 213 (440)
|+. .++.+|++ +.|.+.+++.......+. .....|.+++++|...++|.+.... +.|...+++.......+.
T Consensus 6 ~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~--~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 6 ALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY--GDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT--TEEEEEETTTTEEEEEEE
T ss_pred ccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC--CcEEEEeCCCCcEEEEEE
Confidence 454 34557777 789999987654433333 2223699999999766799998654 589999987544332332
Q ss_pred cC------ccCceEEEEeCCCCEEEEEeCC-----------CCcEEEEEccCCC----cEEEecCCccCceeeeeEecC-
Q psy14258 214 HK------IVYPYGVTVDFPTKHVYWVDTY-----------LDFIDRINYDGTD----RKTIRKGFPVQNLYDITVFEN- 271 (440)
Q Consensus 214 ~~------~~~P~gl~vD~~~~~ly~~d~~-----------~~~i~~~~~dG~~----~~~i~~~~~~~~p~gl~~~~~- 271 (440)
.. ...|.++++++.+++||++... .+.|..+++.... ...... -..+.++++..+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~---~~~~~~~~~s~dg 159 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM---PRQVYLMRAADDG 159 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC---CSSCCCEEECTTS
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC---CCcccceeECCCC
Confidence 21 2348999999999999998844 4789999876422 122211 224667777644
Q ss_pred EEEEEecCCCeEEEEeccCCCceEEEecCC--C-----------------------CeEEEEeccCCC-CCCCCCceeEE
Q psy14258 272 NLFVTSWRNQSIIRVNKFNSDDYETIANFS--R-----------------------PFAIHIYHRQKQ-PDALKPSTFLL 325 (440)
Q Consensus 272 ~ly~td~~~~~i~~~~~~~g~~~~~~~~~~--~-----------------------p~~~~v~~~~~q-p~~~~~~~~l~ 325 (440)
.+|.++ +.|..++..+++....+.... . |.++.+...... |.. ....+.+
T Consensus 160 ~l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~ 235 (349)
T 1jmx_B 160 SLYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT-ADLLYGY 235 (349)
T ss_dssp CEEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC-CEEEEEE
T ss_pred cEEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc-cccceeE
Confidence 577753 348888887776555443111 1 111111100000 000 0001111
Q ss_pred e-ecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc-CCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeee
Q psy14258 326 Y-AKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE-KEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEG 403 (440)
Q Consensus 326 ~-~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~-~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~g 403 (440)
+ .+...+.+..+.++. .-..|.++++++ .++.+|++ .+.|+..++........+..+ ..|.+
T Consensus 236 ~~~~~~~~~~~~~~~~~------------~~~~~~~~~~sp~dg~~l~~~---~~~v~~~d~~~~~~~~~~~~~-~~~~~ 299 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFAD------------LTELYFTGLRSPKDPNQIYGV---LNRLAKYDLKQRKLIKAANLD-HTYYC 299 (349)
T ss_dssp EEEETTTCCEEEEEEEE------------CSSCEEEEEECSSCTTEEEEE---ESEEEEEETTTTEEEEEEECS-SCCCE
T ss_pred EEEeccCCcEEeccccc------------CCCcceeeEecCCCCCEEEEE---cCeEEEEECccCeEEEEEcCC-CCccc
Confidence 1 122222333222211 123678999999 89999988 679999998764433333433 56899
Q ss_pred EEEecCCCcEEEEeCCCCeEEEEEeCCCeeeE
Q psy14258 404 MAVDWMANNLYWTDAGIGTINVAKISDFSIRK 435 (440)
Q Consensus 404 lAvD~~~~~lYwtd~~~~~I~~~~~~g~~~~~ 435 (440)
+++++.++.||.+. ..+.|.+.+++..+..+
T Consensus 300 ~~~s~dg~~l~~~~-~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 300 VAFDKKGDKLYLGG-TFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp EEECSSSSCEEEES-BSSEEEEEETTTTEEEE
T ss_pred eEECCCCCEEEEec-CCCeEEEEeccccceee
Confidence 99999888999864 45899999997534333
No 103
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.24 E-value=1.8e-07 Score=95.71 Aligned_cols=334 Identities=7% Similarity=-0.034 Sum_probs=205.4
Q ss_pred ceeEEEEeecccceeeeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT 125 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 125 (440)
...+++++... ++|..+++......-.++... .+.++.+++.++++|.++. .+.|..+++.....+.+ .
T Consensus 166 ~~~~~V~~~~~---~~V~viD~~t~~v~~~i~~g~-~p~~v~~SpDGr~lyv~~~-dg~V~viD~~~~t~~~v------~ 234 (567)
T 1qks_A 166 ENLFSVTLRDA---GQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGR-DGKVNMIDLWMKEPTTV------A 234 (567)
T ss_dssp GGEEEEEETTT---TEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEET-TSEEEEEETTSSSCCEE------E
T ss_pred CceEEEEeCCC---CeEEEEECCCCeEEEEEeCCC-CccceEECCCCCEEEEEcC-CCeEEEEECCCCCCcEe------E
Confidence 33566666543 449999988665553444433 2889999999999999875 46777777631111111 1
Q ss_pred cceeeccccccce-eee----ecCCcEEEe----ceEEEEecCCceEEEEEcC-C----------CCCceEEEEcCCCCe
Q psy14258 126 RPMLERSLLDGTE-RFP----MVTHKIVYP----EAIYFCTHYMEHCMIAIDL-N----------LSKPRGIALDPTSGY 185 (440)
Q Consensus 126 ~v~~~~~~~~p~~-avD----~~~~~lY~~----~~I~~~~~dg~~~~~~~~~-~----------~~~P~~iavd~~~g~ 185 (440)
. +. ....|++ +++ +.++.+|++ +.|.+++.........+.. . ...+.+|+..+.+..
T Consensus 235 ~--i~-~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~ 311 (567)
T 1qks_A 235 E--IK-IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPE 311 (567)
T ss_dssp E--EE-CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSE
T ss_pred E--Ee-cCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCE
Confidence 1 22 2346999 999 588899998 7888888665433322221 1 114567887775555
Q ss_pred EEEEEcCCCCCcEEEEeCCCCCceeEEe-cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc-EEEecCCccCce
Q psy14258 186 MFFTKWGATRPMLERSLLDGTERFPMVT-HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR-KTIRKGFPVQNL 263 (440)
Q Consensus 186 lywtd~~~~~~~I~r~~~dG~~~~~l~~-~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~-~~i~~~~~~~~p 263 (440)
.+++.... ++|...+........+.. ..-.+|.++.+|+.+.++|.++...++|..+|.....+ ..+..+....||
T Consensus 312 ~vv~~~~~--g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 312 FIVNVKET--GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EEEEETTT--TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred EEEEecCC--CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 55555433 689999886543222221 12346889999999999999999999999999864433 333331225666
Q ss_pred -eeeeE-ec--CEEEEEe-cCCCeEEEEeccCCC-------ceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEEeecC
Q psy14258 264 -YDITV-FE--NNLFVTS-WRNQSIIRVNKFNSD-------DYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLLYAKG 329 (440)
Q Consensus 264 -~gl~~-~~--~~ly~td-~~~~~i~~~~~~~g~-------~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~ 329 (440)
.|+.+ +. +.+|.+. ...+.|..++..+++ ....+.... .+..++. | |+ .+|+++..
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~-~---------p~~~~l~v~~~ 459 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKT-H---------PNSQYLYVDAT 459 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEEC-C---------TTCSEEEEECT
T ss_pred ccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEe-C---------CCCCeEEEecC
Confidence 47664 32 4677665 456888888876532 233333222 2233332 2 34 57777663
Q ss_pred -C-----ccEEEEEEcCCCC---CCce-eeeeec-------CCCCceEEEEEcCCCEEEEEEC----CCCeEEEEecCCC
Q psy14258 330 -K-----PAIIKGLTFKRDG---TTEQ-AIMPIT-------DLKRPSVIDYHEKEEYIYYAEL----TSYVIERRKMFGR 388 (440)
Q Consensus 330 -~-----~~~I~~i~~~~~~---~~~~-~~~~~~-------~~~~p~~l~~d~~~~~vy~~d~----~~~~I~r~~~~g~ 388 (440)
+ ...|..++++... .... ..+++. +..+|..++|++.+..||++.. ..+.|..++....
T Consensus 460 ~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 460 LNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp TCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred CCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 2 2478888876440 0111 234432 2357889999999999999965 3789999887653
Q ss_pred CeEEEEE-CCCCCeeeEE
Q psy14258 389 GKEVVID-TGIYNVEGMA 405 (440)
Q Consensus 389 ~~~~~~~-~~~~~~~glA 405 (440)
.....+. ..+..|.|.-
T Consensus 540 ~~~~~i~~~~~~~P~g~f 557 (567)
T 1qks_A 540 ELKHVIKDERLVTPTGKF 557 (567)
T ss_dssp EEEEEECCTTCCSEEEEE
T ss_pred eEEEEeCCCcccCCCeee
Confidence 3333332 3477888753
No 104
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.21 E-value=1.6e-08 Score=97.71 Aligned_cols=247 Identities=10% Similarity=-0.007 Sum_probs=152.0
Q ss_pred cccccce-eeeecCCcEEEe--ceEEEEecC--CceEEEEEcCCCCCceEEEEcCCCCeEE--EEE------cC-----C
Q psy14258 132 SLLDGTE-RFPMVTHKIVYP--EAIYFCTHY--MEHCMIAIDLNLSKPRGIALDPTSGYMF--FTK------WG-----A 193 (440)
Q Consensus 132 ~~~~p~~-avD~~~~~lY~~--~~I~~~~~d--g~~~~~~~~~~~~~P~~iavd~~~g~ly--wtd------~~-----~ 193 (440)
....|.. |+++.++.||.+ +.|.+.+++ |+.....-......|.+++++|...+|| .++ .+ .
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3457899 999999889988 577777764 5433222111113588999999655433 343 11 1
Q ss_pred CCCcEEEEeCC--CCCceeEEe---cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEec-C-C-ccCcee
Q psy14258 194 TRPMLERSLLD--GTERFPMVT---HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRK-G-F-PVQNLY 264 (440)
Q Consensus 194 ~~~~I~r~~~d--G~~~~~l~~---~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~-~-~-~~~~p~ 264 (440)
. +.+...+++ |.....+.. .....|.++++++.+++||.++...+.|...+++ ......+.. . . ....|.
T Consensus 118 ~-g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 A-GYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp C-CEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred C-ceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 2 456666654 543322221 1345799999999999999999888899999987 333332221 1 0 134699
Q ss_pred eeeEecC--EEEEEecCCCeEEEEe--ccCCCce---EEEecCC--------------CCeEEEEeccCCCCCCCCCc-e
Q psy14258 265 DITVFEN--NLFVTSWRNQSIIRVN--KFNSDDY---ETIANFS--------------RPFAIHIYHRQKQPDALKPS-T 322 (440)
Q Consensus 265 gl~~~~~--~ly~td~~~~~i~~~~--~~~g~~~---~~~~~~~--------------~p~~~~v~~~~~qp~~~~~~-~ 322 (440)
++++..+ .||.++...+.|..++ ..+|+.. ..+..+. .|.++.++. |+ .
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~s---------pdG~ 267 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALT---------FSGK 267 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEEC---------TTSS
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEEC---------CCCC
Confidence 9998754 8999987777766554 3345432 1222221 245565232 34 4
Q ss_pred eEEeecCCcc-----EEEEEEcCCCCCCceeeeeec-CCCCceEEEEEc---CCCEEEEEECCCCeEEEEecCCC
Q psy14258 323 FLLYAKGKPA-----IIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHE---KEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 323 ~l~~~~~~~~-----~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~---~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
+|++++...+ .|..++++..+........+. ....|.+++++| .+++||+++...++|...++++.
T Consensus 268 ~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 268 YMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 7887765433 788888763312111110122 234688999999 79999999887888888888765
No 105
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.19 E-value=3.2e-08 Score=93.30 Aligned_cols=256 Identities=7% Similarity=-0.080 Sum_probs=157.6
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecCCceEE-EEEcCCC----CCceEEEEcCCCCeEEEEEcC----------CC
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCM-IAIDLNL----SKPRGIALDPTSGYMFFTKWG----------AT 194 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~-~~~~~~~----~~P~~iavd~~~g~lywtd~~----------~~ 194 (440)
.|.+ ++++.++.+|++ +.|.+.++...... .+-.... ..|.+++++|...+||+++.+ ..
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 4888 999999889988 58999998754433 3322211 279999999977799999621 12
Q ss_pred CCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEE
Q psy14258 195 RPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLF 274 (440)
Q Consensus 195 ~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly 274 (440)
..|...++++......+.. -..|.++++++.+.+||++ .+.|..+++................|..++-++..||
T Consensus 115 -~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~ 189 (337)
T 1pby_B 115 -TRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVW 189 (337)
T ss_dssp -CEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCC
T ss_pred -ceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEe
Confidence 5899999876543333332 3468899999888889999 3679999887554433332111123444444444555
Q ss_pred EEecCCC-----------------------eEEEEeccCCCceEE-Eec-CCCCeEEEEeccCCCCCCCCCc-eeEEeec
Q psy14258 275 VTSWRNQ-----------------------SIIRVNKFNSDDYET-IAN-FSRPFAIHIYHRQKQPDALKPS-TFLLYAK 328 (440)
Q Consensus 275 ~td~~~~-----------------------~i~~~~~~~g~~~~~-~~~-~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~ 328 (440)
++....+ .|..++..+++.... +.. ...|.++.+. |+ .+|+++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s----------~dg~~l~~~- 258 (337)
T 1pby_B 190 NQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVN----------PAKTRAFGA- 258 (337)
T ss_dssp CCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC----------TTSSEEEEE-
T ss_pred eeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEEC----------CCCCEEEEe-
Confidence 5543333 356666665554321 111 1245555544 33 467776
Q ss_pred CCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEec
Q psy14258 329 GKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDW 408 (440)
Q Consensus 329 ~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~ 408 (440)
.+.|..++++.. .....+.....|.++++++.++++|++ ...+.|...++........+..+ ..|. +.+
T Consensus 259 --~~~v~~~d~~~~----~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~i~v~d~~~~~~~~~~~~~-~~~~-~~~-- 327 (337)
T 1pby_B 259 --YNVLESFDLEKN----ASIKRVPLPHSYYSVNVSTDGSTVWLG-GALGDLAAYDAETLEKKGQVDLP-GNAS-MSL-- 327 (337)
T ss_dssp --ESEEEEEETTTT----EEEEEEECSSCCCEEEECTTSCEEEEE-SBSSEEEEEETTTCCEEEEEECG-GGCC-CBT--
T ss_pred --CCeEEEEECCCC----cCcceecCCCceeeEEECCCCCEEEEE-cCCCcEEEEECcCCcEEEEEEcC-CCCc-eeE--
Confidence 278988888654 222222333578899999999999988 45789999998764433333322 2233 222
Q ss_pred CCCcEEEEe
Q psy14258 409 MANNLYWTD 417 (440)
Q Consensus 409 ~~~~lYwtd 417 (440)
.+..+|+.+
T Consensus 328 ~~~~~~~~~ 336 (337)
T 1pby_B 328 ASVRLFTRD 336 (337)
T ss_dssp CCCEEEECC
T ss_pred eeeEEEecC
Confidence 245677643
No 106
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.18 E-value=2.3e-09 Score=103.55 Aligned_cols=270 Identities=5% Similarity=-0.133 Sum_probs=164.6
Q ss_pred cCCcEEEe----c----eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcC-------CCCCcEEEEeCCCCC
Q psy14258 143 VTHKIVYP----E----AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWG-------ATRPMLERSLLDGTE 207 (440)
Q Consensus 143 ~~~~lY~~----~----~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~-------~~~~~I~r~~~dG~~ 207 (440)
....+|++ + +|.+.|.+.....--+..+ ..| +++++|..++||.++.. .....|...++....
T Consensus 30 ~~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred CCCeEEEECCccCCccceEEEEECCCCeEEEEEeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 34569998 3 7888888765543333323 358 99999999999999842 101478888886433
Q ss_pred ceeEEecC-------ccCceEEEEeCCCCEEEEEeCC-CCcEEE--EEccCCCcEEEecCCccCceeeeeEecCEEEEEe
Q psy14258 208 RFPMVTHK-------IVYPYGVTVDFPTKHVYWVDTY-LDFIDR--INYDGTDRKTIRKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 208 ~~~l~~~~-------~~~P~gl~vD~~~~~ly~~d~~-~~~i~~--~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td 277 (440)
...-+..+ ...|.++++++.+++||+++.. .+.+.. +|... ...+..+ ....+.-.++..|.+.
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t--v~~i~v~----~~~~~~p~g~~~~~~~ 181 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD--DQLTKSA----SCFHIHPGAAATHYLG 181 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE--EEEEECS----SCCCCEEEETTEEECC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh--ceEEECC----CceEEccCCCeEEEEE
Confidence 22222111 2469999999999999999875 456666 55543 4444322 1223344556788888
Q ss_pred cCCCeEEEEeccC-----CCceEE----EecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCcee
Q psy14258 278 WRNQSIIRVNKFN-----SDDYET----IANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQA 348 (440)
Q Consensus 278 ~~~~~i~~~~~~~-----g~~~~~----~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~ 348 (440)
..++++..++..+ ++.... +.-...|. . . ...+.++++.. +.+..+++.+. .. ..
T Consensus 182 ~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~---------~~~~~~~~vs~--~~V~viD~~~~-~~-~v 245 (368)
T 1mda_H 182 SCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-A---------NYPGMLVWAVA--SSILQGDIPAA-GA-TM 245 (368)
T ss_dssp CCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-E---------TTTTEEEECBS--SCCEEEECCSS-CC-EE
T ss_pred cCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-c---------ccCCEEEEEcC--CEEEEEECCCC-cc-eE
Confidence 7788877777654 221100 00011232 1 1 12244555544 78888887653 11 11
Q ss_pred e--eee------cCCCCceE---EEEEcCCCEEEEEEC---C-----CCeEEEEecCCCCeEEEEECCCCCeeeEEEecC
Q psy14258 349 I--MPI------TDLKRPSV---IDYHEKEEYIYYAEL---T-----SYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWM 409 (440)
Q Consensus 349 ~--~~~------~~~~~p~~---l~~d~~~~~vy~~d~---~-----~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~ 409 (440)
. +++ .....|.+ +++++.++++|++.. + .+.+..+++.......-+..+ ..|.||++.+.
T Consensus 246 ~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~D 324 (368)
T 1mda_H 246 KAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQD 324 (368)
T ss_dssp ECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCS
T ss_pred EEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCC
Confidence 1 111 11123555 889999999999865 3 345557777653322212222 36999999998
Q ss_pred CCcEEEEeC-CCCeEEEEEeCCCeeeEEe
Q psy14258 410 ANNLYWTDA-GIGTINVAKISDFSIRKVL 437 (440)
Q Consensus 410 ~~~lYwtd~-~~~~I~~~~~~g~~~~~~l 437 (440)
++.||+++. ..+.|.++++...+..+.|
T Consensus 325 g~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 325 GASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp SSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred CCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 989999998 6999999999864444443
No 107
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.16 E-value=8.2e-08 Score=92.68 Aligned_cols=271 Identities=10% Similarity=0.018 Sum_probs=154.1
Q ss_pred CCcEEEe---------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcC-------CCCCcEEEEeCCCCC
Q psy14258 144 THKIVYP---------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWG-------ATRPMLERSLLDGTE 207 (440)
Q Consensus 144 ~~~lY~~---------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~-------~~~~~I~r~~~dG~~ 207 (440)
.+.+|++ +.|.+.+.+.......+..+ ..| +|+++|..++||.++.. .....|...+.+...
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g-~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTA-FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECC-EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCeEEEEecCC-CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 3457776 37888886543332222323 468 99999988899999841 101358888875322
Q ss_pred c-eeEEec-----CccCceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCCcEEE-ecCCccCceeeeeEec--CEEEEEe
Q psy14258 208 R-FPMVTH-----KIVYPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTDRKTI-RKGFPVQNLYDITVFE--NNLFVTS 277 (440)
Q Consensus 208 ~-~~l~~~-----~~~~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~~~~i-~~~~~~~~p~gl~~~~--~~ly~td 277 (440)
. ..+-.. ....|.++++++.+++||.++.. .+.|..++.+....... .. .....++.++. ...|++.
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~---~~~~~~v~~~p~~~~~~~~~ 169 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA---AAGCWSVIPQPNRPRSFMTI 169 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG---GTTEEEEEECTTSSSEEEEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec---CCCcceeEEcCCCCeeEEEE
Confidence 2 222111 12479999999999999999875 67899998864422211 11 22222333332 2445554
Q ss_pred cCCCeEEEEeccC-CCceEEEecCCCCeEEEEeccCCCCCCC----CCceeEEeecCCccEEEEEEcCCCCCCceeeeee
Q psy14258 278 WRNQSIIRVNKFN-SDDYETIANFSRPFAIHIYHRQKQPDAL----KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI 352 (440)
Q Consensus 278 ~~~~~i~~~~~~~-g~~~~~~~~~~~p~~~~v~~~~~qp~~~----~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~ 352 (440)
...+++..+.... ++....... ..+++....|... ..+..++++.. +.|..+++......-....++
T Consensus 170 ~~dg~~~~v~~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~v~v~d~~~~~~~~~~~~~~ 241 (361)
T 2oiz_A 170 CGDGGLLTINLGEDGKVASQSRS------KQMFSVKDDPIFIAPALDKDKAHFVSYY--GNVYSADFSGDEVKVDGPWSL 241 (361)
T ss_dssp ETTSSEEEEEECTTSSEEEEEEC------CCCSCTTTSCBCSCCEECSSEEEEEBTT--SEEEEEECSSSSCEEEEEEES
T ss_pred CCCCcEEEEEECCCCcEeeeccc------cceEcCCCCceEEEecccCCEEEEEeCC--CeEEEEEecCCCceecccccc
Confidence 4555555444322 322211110 0112211112111 11234444433 678888876541110000111
Q ss_pred ------cCCCCceE---EEEEcCCCEEEEEEC----------CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcE
Q psy14258 353 ------TDLKRPSV---IDYHEKEEYIYYAEL----------TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNL 413 (440)
Q Consensus 353 ------~~~~~p~~---l~~d~~~~~vy~~d~----------~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~l 413 (440)
.....|.+ +++++.++++|++.. ..++|+.+++.......-+..+ . |.+||+++.++.|
T Consensus 242 ~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~-~-p~~ia~spdg~~l 319 (361)
T 2oiz_A 242 LNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR-D-ALSMTIDQQRNLM 319 (361)
T ss_dssp CCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT-T-CCEEEEETTTTEE
T ss_pred cCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC-C-eeEEEECCCCCEE
Confidence 00112343 899999999999864 2458999998764333333444 3 9999999999999
Q ss_pred EEEeCCCCeEEEEEeCCC
Q psy14258 414 YWTDAGIGTINVAKISDF 431 (440)
Q Consensus 414 Ywtd~~~~~I~~~~~~g~ 431 (440)
|.++. ++|.++++...
T Consensus 320 ~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 320 LTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEECS--SCEEEEECSSS
T ss_pred EEeCC--CeEEEEECCCC
Confidence 99985 89999998763
No 108
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.14 E-value=4.7e-08 Score=88.65 Aligned_cols=198 Identities=10% Similarity=0.038 Sum_probs=131.6
Q ss_pred ce-eeeecCCcEEEe------ceEEEEecCCce-EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 137 TE-RFPMVTHKIVYP------EAIYFCTHYMEH-CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 137 ~~-avD~~~~~lY~~------~~I~~~~~dg~~-~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
.| +++ ++.||.+ .+|.+.+++... ...+-...-....||+++ .+.||.++|.. ..+.+.+.+--..
T Consensus 46 qGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~--~~v~v~D~~t~~~ 119 (262)
T 3nol_A 46 EGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKN--GLGFVWNIRNLRQ 119 (262)
T ss_dssp EEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSS--SEEEEEETTTCCE
T ss_pred ceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeC--CEEEEEECccCcE
Confidence 67 777 5789999 279999987544 333322222234677876 48999999987 5999999864332
Q ss_pred eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC-CCcEEEec---CCccCceeeeeEecCEEEEEecCCCeEE
Q psy14258 209 FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG-TDRKTIRK---GFPVQNLYDITVFENNLFVTSWRNQSII 284 (440)
Q Consensus 209 ~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG-~~~~~i~~---~~~~~~p~gl~~~~~~ly~td~~~~~i~ 284 (440)
..-+.-. ..+.||+-| +++||.+|. .++|..+|... .....+.. +..+..+..+...++.||...|.++.|.
T Consensus 120 ~~ti~~~-~eG~glt~d--g~~L~~SdG-s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 120 VRSFNYD-GEGWGLTHN--DQYLIMSDG-TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEEECS-SCCCCEEEC--SSCEEECCS-SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEE
T ss_pred EEEEECC-CCceEEecC--CCEEEEECC-CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEE
Confidence 2222221 245677765 789999984 78999998764 33334332 2234556678888889999999999999
Q ss_pred EEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEE
Q psy14258 285 RVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYH 364 (440)
Q Consensus 285 ~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d 364 (440)
++|..+|+....+. +.+- ... .........-|.|||||
T Consensus 196 vIDp~tG~V~~~Id----------------------------------------~~~L-~~~-~~~~~~~~~vlNGIA~d 233 (262)
T 3nol_A 196 RIDPETGKVTGIID----------------------------------------LNGI-LAE-AGPLPSPIDVLNGIAWD 233 (262)
T ss_dssp EECTTTCBEEEEEE----------------------------------------CTTG-GGG-SCSCCSSCCCEEEEEEE
T ss_pred EEECCCCcEEEEEE----------------------------------------CCcC-ccc-cccccCcCCceEEEEEc
Confidence 99998886554332 1111 000 00000122358999999
Q ss_pred cCCCEEEEEECCCCeEEEEecC
Q psy14258 365 EKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 365 ~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+.++++|++...=..+|++.+.
T Consensus 234 p~~~~lfVTGK~Wp~~~ev~~~ 255 (262)
T 3nol_A 234 KEHHRLFVTGKLWPKVFEITLT 255 (262)
T ss_dssp TTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCEEEEECCCCCceEEEEEe
Confidence 9999999998877788888764
No 109
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.14 E-value=1.1e-08 Score=95.78 Aligned_cols=205 Identities=11% Similarity=-0.037 Sum_probs=144.0
Q ss_pred cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec-C-----CccCceeeeeE---ec-CEEEE-Eec----
Q psy14258 214 HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK-G-----FPVQNLYDITV---FE-NNLFV-TSW---- 278 (440)
Q Consensus 214 ~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~-----~~~~~p~gl~~---~~-~~ly~-td~---- 278 (440)
....+|.+++.|...+++|+++...+.|.+++.++.....+.- + ....+|.||.+ +. ++|++ ++.
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3456899999998899999999999999999998665554422 1 11347899999 44 47877 442
Q ss_pred --------CCCeEEEEecc---CCCceEEEe--c-----------C-CCCeEEEEeccCCCCCCCCCceeEEeecCCc-c
Q psy14258 279 --------RNQSIIRVNKF---NSDDYETIA--N-----------F-SRPFAIHIYHRQKQPDALKPSTFLLYAKGKP-A 332 (440)
Q Consensus 279 --------~~~~i~~~~~~---~g~~~~~~~--~-----------~-~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~-~ 332 (440)
....|.+++.. +++....+. . . ..+.++++. +++-.|++++.. +
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD----------~~GnaYVt~s~~~~ 159 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQD----------RDGNSYVAFALGMP 159 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEEC----------TTSCEEEEEEESSC
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEEC----------CCCCEEEeCCCCCC
Confidence 25678899987 566654321 1 1 125566666 467899988888 8
Q ss_pred EEEEEEcCCCCCCceeeee---ecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEE-EE-----CCCCCeee
Q psy14258 333 IIKGLTFKRDGTTEQAIMP---ITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVV-ID-----TGIYNVEG 403 (440)
Q Consensus 333 ~I~~i~~~~~~~~~~~~~~---~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~-~~-----~~~~~~~g 403 (440)
.|.+++.++. ........ ......+.||+|++.++.|++++. .++|+++++....+..+ .. ..+..|+|
T Consensus 160 ~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dg 237 (334)
T 2p9w_A 160 AIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEK 237 (334)
T ss_dssp EEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCCTTEEE
T ss_pred eEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccccCccc
Confidence 9999999987 22110000 111224679999999999999998 99999999984322112 11 13578999
Q ss_pred E-EEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 404 M-AVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 404 l-AvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
| +++..++-|++++...+++.+.+.||
T Consensus 238 ilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 238 IVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred ccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 5 88876766699998888888888877
No 110
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=2.7e-07 Score=89.41 Aligned_cols=284 Identities=9% Similarity=-0.023 Sum_probs=165.4
Q ss_pred ecccEEEEEEc-CCC---CceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEec-------------
Q psy14258 90 YMEHCMIAIDL-NLS---KPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYPE------------- 151 (440)
Q Consensus 90 ~~~~~ly~~d~-~~~---~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~~------------- 151 (440)
+..+++|.+|. ... .|..++.+... .+ .. +..+ ..| + ++.+.++.||+++
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~--~~------~~--i~~g-~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGS--IL------GH--VNGG-FLP-NPVAAHSGSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCe--EE------EE--ecCC-CCC-CeEECCCCCEEEEEeccccccccCCCCC
Confidence 44577888886 444 44555543221 11 11 2222 357 9 9999999999982
Q ss_pred eEEEEecCCceE-EEEEcC-C-----CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEE
Q psy14258 152 AIYFCTHYMEHC-MIAIDL-N-----LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTV 224 (440)
Q Consensus 152 ~I~~~~~dg~~~-~~~~~~-~-----~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~v 224 (440)
.|.+.+...... ..+-.. . ...|++++++|..++||.++.... ..|...+ +.. +.+.. .+..|.++.+
T Consensus 98 ~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~-~~v~viD-~t~--~~~~~-~i~~~~~~~~ 172 (373)
T 2mad_H 98 YVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAG-PAVGLVV-QGG--SSDDQ-LLSSPTCYHI 172 (373)
T ss_pred eEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCC-CeEEEEE-CCC--CEEeE-EcCCCceEEE
Confidence 377888764322 222111 0 257999999999999999986532 4788887 533 22222 0233445666
Q ss_pred eCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCC--ccCceeee----eEecCEEEEEecCCCeEEEEeccCCCceEEEe
Q psy14258 225 DFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGF--PVQNLYDI----TVFENNLFVTSWRNQSIIRVNKFNSDDYETIA 298 (440)
Q Consensus 225 D~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~--~~~~p~gl----~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~ 298 (440)
.+.+.+.|++....+++..++..|.....+.... .-..|... .-+++.+||.. ..+.|+.++..++.. .++.
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~-~v~~ 250 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGA-TNKA 250 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcc-eEee
Confidence 6677888998888888888888333221221000 01122111 12245666665 456788888754422 1111
Q ss_pred cCC-----------CCeEEE--EeccCCCCCCCCCc-eeEEeecCC---------ccEEEEEEcCCCCCCceeeeeecCC
Q psy14258 299 NFS-----------RPFAIH--IYHRQKQPDALKPS-TFLLYAKGK---------PAIIKGLTFKRDGTTEQAIMPITDL 355 (440)
Q Consensus 299 ~~~-----------~p~~~~--v~~~~~qp~~~~~~-~~l~~~~~~---------~~~I~~i~~~~~~~~~~~~~~~~~~ 355 (440)
... .|.+.. .+ .++ ..||++... .+.|..|++... +....+..-
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~---------s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~----~vv~~i~~g 317 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAY---------LKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG----QTSSQISLG 317 (373)
T ss_pred eeeecCCcccccceecCceEeEEE---------CCCCCEEEEEeccCCcccccCCCCeEEEEECCCC----EEEEEEECC
Confidence 110 233311 12 123 567775431 257888988665 333333333
Q ss_pred CCceEEEEEcCCC-EEEEEECCCCeEEEEecCCCCeEEE-EECCCCCeeeEEE
Q psy14258 356 KRPSVIDYHEKEE-YIYYAELTSYVIERRKMFGRGKEVV-IDTGIYNVEGMAV 406 (440)
Q Consensus 356 ~~p~~l~~d~~~~-~vy~~d~~~~~I~r~~~~g~~~~~~-~~~~~~~~~glAv 406 (440)
..|.+++++++++ .+|.++...+.|..+++........ +..| ..|.+|.+
T Consensus 318 ~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG-~~P~~~~~ 369 (373)
T 2mad_H 318 HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELG-SGPQVLSV 369 (373)
T ss_pred CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCC-CCCcEEEE
Confidence 4799999999998 7888877799999999986443322 3333 56888875
No 111
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=5.4e-08 Score=87.46 Aligned_cols=201 Identities=11% Similarity=0.075 Sum_probs=132.9
Q ss_pred cce-eeeecCCcEEEe------ceEEEEecCCceE-EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy14258 136 GTE-RFPMVTHKIVYP------EAIYFCTHYMEHC-MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE 207 (440)
Q Consensus 136 p~~-avD~~~~~lY~~------~~I~~~~~dg~~~-~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~ 207 (440)
-.| ++|. +.||.+ .+|.+.++..... ..+--..-....||+++ .++||..+|.. .++.+.+.+.-.
T Consensus 23 tqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~--~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRN--HEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSS--SEEEEEETTTTE
T ss_pred cccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeC--CEEEEEECCcCc
Confidence 456 7774 789999 3799999975443 33321222334677776 58999999987 599999985433
Q ss_pred ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCC-cEEEec---CCccCceeeeeEecCEEEEEecCCCeE
Q psy14258 208 RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTD-RKTIRK---GFPVQNLYDITVFENNLFVTSWRNQSI 283 (440)
Q Consensus 208 ~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~-~~~i~~---~~~~~~p~gl~~~~~~ly~td~~~~~i 283 (440)
...-+.-. ..+.||+-| +++||.+| +.++|..+|..... ...+.. +..+..+..|...++.||...|.++.|
T Consensus 97 ~~~ti~~~-~~Gwglt~d--g~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I 172 (243)
T 3mbr_X 97 PRARFRYP-GEGWALTSD--DSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRI 172 (243)
T ss_dssp EEEEEECS-SCCCEEEEC--SSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEE
T ss_pred EEEEEeCC-CCceEEeeC--CCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeE
Confidence 22222222 345677764 88999999 48899999875433 333322 223456677888889999999999999
Q ss_pred EEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEE
Q psy14258 284 IRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDY 363 (440)
Q Consensus 284 ~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~ 363 (440)
.++|..+|+....+. +.+- .............-|.||||
T Consensus 173 ~vIDp~tG~V~~~id----------------------------------------l~~l-~~~~~~~~~~~~~vlNGIA~ 211 (243)
T 3mbr_X 173 ARIDPASGKVVAWID----------------------------------------LQAL-VPDADALTDSTNDVLNGIAF 211 (243)
T ss_dssp EEECTTTCBEEEEEE----------------------------------------CGGG-STTTTSCCCTTSSCEEEEEE
T ss_pred EEEECCCCCEEEEEE----------------------------------------CCcC-ccccccccCCcCCceEEEEE
Confidence 999998886554332 1110 00000000012235899999
Q ss_pred EcCCCEEEEEECCCCeEEEEecCC
Q psy14258 364 HEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 364 d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
|+.++++|+|...=..+|++.+..
T Consensus 212 d~~~~~lfVTGK~wp~~~~v~~~~ 235 (243)
T 3mbr_X 212 DAEHDRLFVTGKRWPMLYEIRLTP 235 (243)
T ss_dssp ETTTTEEEEEETTCSEEEEEEECC
T ss_pred cCCCCEEEEECCCCCcEEEEEEec
Confidence 999999999998778899988764
No 112
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.09 E-value=4.2e-07 Score=87.64 Aligned_cols=256 Identities=7% Similarity=-0.070 Sum_probs=148.0
Q ss_pred cccce-eeeecCCcEEEec-------------eEEEEecCCce-EEEEEcC-----CCCCceEEEEcCCCCeEEEEEcCC
Q psy14258 134 LDGTE-RFPMVTHKIVYPE-------------AIYFCTHYMEH-CMIAIDL-----NLSKPRGIALDPTSGYMFFTKWGA 193 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~~-------------~I~~~~~dg~~-~~~~~~~-----~~~~P~~iavd~~~g~lywtd~~~ 193 (440)
..| + ++++.++.||+++ .|.+.+..... ...+-.. ....|.+|+++|..++||.++...
T Consensus 51 ~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~ 129 (361)
T 2oiz_A 51 FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASP 129 (361)
T ss_dssp EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESS
T ss_pred CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCC
Confidence 468 9 9999999999982 38888876433 2333211 135799999999888999998752
Q ss_pred CCCcEEEEeCCCCCceeEEe-cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEE--Eec-C--CccCceeeee
Q psy14258 194 TRPMLERSLLDGTERFPMVT-HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKT--IRK-G--FPVQNLYDIT 267 (440)
Q Consensus 194 ~~~~I~r~~~dG~~~~~l~~-~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~--i~~-~--~~~~~p~gl~ 267 (440)
. ..|...+++.. +.+.. .......++.+.+.+.+.|++....+++..++.+...... ... . ..-..|..+.
T Consensus 130 ~-~~v~v~d~~~~--~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (361)
T 2oiz_A 130 A-TSIGIVDVAKG--DYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIA 206 (361)
T ss_dssp S-EEEEEEETTTT--EEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSC
T ss_pred C-CeEEEEECCCC--cEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEE
Confidence 2 48888888643 33322 2222223344554454556555555666666554322111 110 0 0012333332
Q ss_pred E--ecCEEEEEecCCCeEEEEeccCCCceEE--EecCC--------CCeE---EEEeccCCCCCCCCCc-eeEEeecC--
Q psy14258 268 V--FENNLFVTSWRNQSIIRVNKFNSDDYET--IANFS--------RPFA---IHIYHRQKQPDALKPS-TFLLYAKG-- 329 (440)
Q Consensus 268 ~--~~~~ly~td~~~~~i~~~~~~~g~~~~~--~~~~~--------~p~~---~~v~~~~~qp~~~~~~-~~l~~~~~-- 329 (440)
. .++.+++... .+.|+.++...++...+ +.... .|.+ +. ++ |+ ..+|++..
T Consensus 207 ~~~~g~~~~~~~~-~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a-~~---------~dg~~lyv~~~~~ 275 (361)
T 2oiz_A 207 PALDKDKAHFVSY-YGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVG-LH---------RASGRMYVFMHPD 275 (361)
T ss_dssp CEECSSEEEEEBT-TSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEE-EE---------TTTTEEEEEEESS
T ss_pred ecccCCEEEEEeC-CCeEEEEEecCCCceecccccccCccccccccccCCeeEEE-Ee---------cCCCeEEEEEccC
Confidence 2 2346666553 56777777644332211 10000 1222 22 22 23 56777643
Q ss_pred --------CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE--CCCC
Q psy14258 330 --------KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID--TGIY 399 (440)
Q Consensus 330 --------~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~--~~~~ 399 (440)
....|..+++... .....+..-. |.+|++++.+++||.++. ++|..+++.....+.+-. ..-.
T Consensus 276 ~~~~~~~~~~~~v~viD~~t~----~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~ 348 (361)
T 2oiz_A 276 GKEGTHKFPAAEIWVMDTKTK----QRVARIPGRD-ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAE 348 (361)
T ss_dssp CCTTCTTCCCSEEEEEETTTT----EEEEEEECTT-CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCS
T ss_pred CCcccccCCCceEEEEECCCC----cEEEEEecCC-eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCC
Confidence 1247888887665 3333333333 999999999999999884 999999987642233322 2236
Q ss_pred CeeeEEEecCCC
Q psy14258 400 NVEGMAVDWMAN 411 (440)
Q Consensus 400 ~~~glAvD~~~~ 411 (440)
.|.+|++++.++
T Consensus 349 ~P~~~~~~p~G~ 360 (361)
T 2oiz_A 349 ASLQVQFHPVGG 360 (361)
T ss_dssp SEEEEEECCCSC
T ss_pred CcEEEEecCCCC
Confidence 899999998775
No 113
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.06 E-value=6.7e-08 Score=87.66 Aligned_cols=188 Identities=8% Similarity=0.014 Sum_probs=130.9
Q ss_pred ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC-CCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC-CCc
Q psy14258 174 PRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG-TDR 251 (440)
Q Consensus 174 P~~iavd~~~g~lywtd~~~~~~~I~r~~~d-G~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG-~~~ 251 (440)
-+||.++. +.||.+.... ++|.+.++. |.....+ ...-....|++++ +++||.++...+.+..+|... ...
T Consensus 57 tqGL~~~~--~~Ly~stG~~--g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQ--GTLRQLSLESAQPVWME-RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEET--TEEEEEETTT--TEEEECCSSCSSCSEEE-ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEEC--CEEEEEcCCC--CEEEEEECCCCcEEeEE-CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 47999984 8999999765 578888886 4444444 3332234567775 889999999999999998753 333
Q ss_pred EEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCCC------CeEEEEeccCCCCCCCCCceeEE
Q psy14258 252 KTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFSR------PFAIHIYHRQKQPDALKPSTFLL 325 (440)
Q Consensus 252 ~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~------p~~~~v~~~~~qp~~~~~~~~l~ 325 (440)
..+.. -..+.|++.+++.||.+| +++.|..+|..+.+....+.-..+ +..+... ++.||
T Consensus 130 ~ti~~---~~eGwGLt~Dg~~L~vSd-Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-----------dG~ly 194 (268)
T 3nok_A 130 RTTRY---SGEGWGLCYWNGKLVRSD-GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-----------NGVIY 194 (268)
T ss_dssp EEEEC---SSCCCCEEEETTEEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-----------TTEEE
T ss_pred EEEeC---CCceeEEecCCCEEEEEC-CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-----------CCEEE
Confidence 44433 245789999999999999 589999999988877664432112 2233322 45677
Q ss_pred eecCCccEEEEEEcCCCCCCceeeeeec------------CCCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 326 YAKGKPAIIKGLTFKRDGTTEQAIMPIT------------DLKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 326 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~------------~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
+..-..+.|.+|++... .- ...+.+. ...-|.|||||+.++++|+|...=..+|++.+
T Consensus 195 anvw~s~~I~vIDp~TG-~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~~ev~~ 264 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATG-TV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRLFEVRL 264 (268)
T ss_dssp EEETTCSEEEEECTTTC-BE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEEEEEEE
T ss_pred EEECCCCeEEEEeCCCC-cE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCceEEEEE
Confidence 77655688999988655 11 1122222 12367899999999999999877778888876
No 114
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.06 E-value=3.7e-08 Score=97.95 Aligned_cols=248 Identities=7% Similarity=-0.021 Sum_probs=154.7
Q ss_pred eeccccccce-eeeecCC-cEEEe---ceEEEEecCCceE-EEEE------cCC-----CCCceEEEEcCC---CCeEEE
Q psy14258 129 LERSLLDGTE-RFPMVTH-KIVYP---EAIYFCTHYMEHC-MIAI------DLN-----LSKPRGIALDPT---SGYMFF 188 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~-~lY~~---~~I~~~~~dg~~~-~~~~------~~~-----~~~P~~iavd~~---~g~lyw 188 (440)
+.+++..|.+ |+++.+. .||++ ++|.+.+.+|... ..+. ... ..-+.+||++|. +++||+
T Consensus 9 va~gL~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv 88 (463)
T 2wg3_C 9 VVSGLRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYV 88 (463)
T ss_dssp EEEEESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEE
T ss_pred eccCCCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEE
Confidence 4578999999 9999874 69999 7899988877531 1111 111 345789999995 688888
Q ss_pred EEcCCC----------CCcEEEEeCCCC--------CceeEEec----CccCceEEEEeCCCCEEEEEeC--C-------
Q psy14258 189 TKWGAT----------RPMLERSLLDGT--------ERFPMVTH----KIVYPYGVTVDFPTKHVYWVDT--Y------- 237 (440)
Q Consensus 189 td~~~~----------~~~I~r~~~dG~--------~~~~l~~~----~~~~P~gl~vD~~~~~ly~~d~--~------- 237 (440)
+-.... ..+|.|+.++.. ..++|+.. ...+...|++++ .++||++-. .
T Consensus 89 ~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~ 167 (463)
T 2wg3_C 89 SYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDME 167 (463)
T ss_dssp EEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHH
T ss_pred EEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccc
Confidence 753211 027888888632 23344432 233466799995 569999842 1
Q ss_pred --------CCcEEEEEccCC--------------------CcEEEecCCccCceeeeeEecC--------EEEEEec-C-
Q psy14258 238 --------LDFIDRINYDGT--------------------DRKTIRKGFPVQNLYDITVFEN--------NLFVTSW-R- 279 (440)
Q Consensus 238 --------~~~i~~~~~dG~--------------------~~~~i~~~~~~~~p~gl~~~~~--------~ly~td~-~- 279 (440)
.++|.+++.||+ ..++...+ +++|+|++++.. ++|.+|. +
T Consensus 168 ~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G--~RNp~gla~dp~tg~~~G~l~~~~~D~~G~ 245 (463)
T 2wg3_C 168 EMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHG--LHDPGRCAVDRHPTDININLTILCSDSNGK 245 (463)
T ss_dssp HCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEEC--CSSCCBEEEESSCSSTTCSEEEEEECC---
T ss_pred cccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEEC--CCCcceEEECCCCCCcccceEEEecccCCC
Confidence 358999999994 23445556 899999999864 7888885 2
Q ss_pred ---CCeEEEEecc--CCC--ceEEEecC--CCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCC-ceee
Q psy14258 280 ---NQSIIRVNKF--NSD--DYETIANF--SRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTT-EQAI 349 (440)
Q Consensus 280 ---~~~i~~~~~~--~g~--~~~~~~~~--~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~-~~~~ 349 (440)
...|..+.+- -|- ....+..- ..|.++.+|....-|. -.+-+++++.. ++|.++.++..+.. .+..
T Consensus 246 ~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~---~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~ 321 (463)
T 2wg3_C 246 NRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSER---LYGSYVFGDRN-GNFLTLQQSPVTKQWQEKP 321 (463)
T ss_dssp ---CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTT---TTTCEEEEETT-SCEEEEEC-----CCEEEE
T ss_pred CCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChh---hcceEEEecCC-CcEEEEEeCCCCceeeEEE
Confidence 2345444221 111 11112111 3578888886555442 23557777765 78999988765222 1111
Q ss_pred eee--------cCCCCceEEEEEcCCCEEEEEEC-------CCCeEEEEe
Q psy14258 350 MPI--------TDLKRPSVIDYHEKEEYIYYAEL-------TSYVIERRK 384 (440)
Q Consensus 350 ~~~--------~~~~~p~~l~~d~~~~~vy~~d~-------~~~~I~r~~ 384 (440)
+.. ....+|.+++.+++ +.||++|. ..++|+|+.
T Consensus 322 ~~~g~~~~~~~~~~~r~~~v~~~pd-G~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 322 LCLGTSGSCRGYFSGHILGFGEDEL-GEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp ECEEETTSSCSCCCSEEEEEEECTT-CCEEEEEESSCGGGCSSEEEEEEE
T ss_pred eecCCcccccccccCcceEEEECCC-CCEEEEeccCCcccCCCCcEEEec
Confidence 110 11347899999986 56999986 578999997
No 115
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.05 E-value=5.3e-09 Score=100.94 Aligned_cols=277 Identities=7% Similarity=-0.079 Sum_probs=164.8
Q ss_pred ccEEEEEEcCCC----CceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEec-------------eE
Q psy14258 92 EHCMIAIDLNLS----KPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYPE-------------AI 153 (440)
Q Consensus 92 ~~~ly~~d~~~~----~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~~-------------~I 153 (440)
..++|.++...+ +|..++.+ ..+.+ .. +..+ ..| + ++++.++.||+++ .|
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~--t~~v~------~~--i~vG-~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~V 98 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAG--CGVTL------GH--SLGA-FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYV 98 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETT--TTEEE------EE--EEEC-TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEE
T ss_pred CCeEEEECCccCCccceEEEEECC--CCeEE------EE--EeCC-CCC-ceEECCCCCEEEEEcccccccccCCCCCEE
Confidence 367999998766 44344433 22221 11 2222 358 9 9999999999982 48
Q ss_pred EEEecCCceE-EEEEcC------CCCCceEEEEcCCCCeEEEEEcCCCCCcEEE--EeCCCCCceeEEecCccCceEEEE
Q psy14258 154 YFCTHYMEHC-MIAIDL------NLSKPRGIALDPTSGYMFFTKWGATRPMLER--SLLDGTERFPMVTHKIVYPYGVTV 224 (440)
Q Consensus 154 ~~~~~dg~~~-~~~~~~------~~~~P~~iavd~~~g~lywtd~~~~~~~I~r--~~~dG~~~~~l~~~~~~~P~gl~v 224 (440)
.+.|+..... ..+-.. ....|++|+++|..++||.++.... ..+.. .++.. ...+ . + |.++.+
T Consensus 99 sviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~-~~v~V~~iD~~t--v~~i-~--v--~~~~~~ 170 (368)
T 1mda_H 99 EVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSS-AAAGLSVPGASD--DQLT-K--S--ASCFHI 170 (368)
T ss_dssp EEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSS-CEEEEEETTTEE--EEEE-E--C--SSCCCC
T ss_pred EEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCC-CeEEEEEEchhh--ceEE-E--C--CCceEE
Confidence 8888876443 333211 1257999999999889999997632 36666 44433 2222 1 1 112233
Q ss_pred eCCCCEEEEEeCCCCcEEEEEccCCCc---EEEe----cCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 225 DFPTKHVYWVDTYLDFIDRINYDGTDR---KTIR----KGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 225 D~~~~~ly~~d~~~~~i~~~~~dG~~~---~~i~----~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
.+.++++|.+....+++..++++..++ +.+. .-..-..|.. .-.++.+||+.. +.|..++..+++. +++
T Consensus 171 ~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~-~~~~~~~~~vs~--~~V~viD~~~~~~-~v~ 246 (368)
T 1mda_H 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQ-ANYPGMLVWAVA--SSILQGDIPAAGA-TMK 246 (368)
T ss_dssp EEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEE-ETTTTEEEECBS--SCCEEEECCSSCC-EEE
T ss_pred ccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccc-cccCCEEEEEcC--CEEEEEECCCCcc-eEE
Confidence 445778888888888888888765111 1110 0000134652 333557888876 8888888754322 222
Q ss_pred ecCC-----------CCeE---EEEeccCCCCCCCCCc-eeEEeecC---C-----ccEEEEEEcCCCCCCceeeeeecC
Q psy14258 298 ANFS-----------RPFA---IHIYHRQKQPDALKPS-TFLLYAKG---K-----PAIIKGLTFKRDGTTEQAIMPITD 354 (440)
Q Consensus 298 ~~~~-----------~p~~---~~v~~~~~qp~~~~~~-~~l~~~~~---~-----~~~I~~i~~~~~~~~~~~~~~~~~ 354 (440)
.... .|.+ +.+. ++ ..||++.. + ...+..|++... .....+..
T Consensus 247 ~~~~~~~~~~~~~~~~p~g~~~v~~s----------~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~----~vv~~i~v 312 (368)
T 1mda_H 247 AAIDGNESGRKADNFRSAGFQMVAKL----------KNTDGIMILTVEHSRSCLAAAENTSSVTASVG----QTSGPISN 312 (368)
T ss_dssp CCCCSSCTHHHHTTEEECSSSCEEEE----------TTTTEEEEEEEECSSCTTSCEEEEEEEESSSC----CEEECCEE
T ss_pred EEEEeccccccccccccCcceeeEEc----------CCCCEEEEEeccccCcccccCCCEEEEECCCC----eEEEEEEC
Confidence 2111 2222 2222 23 56777643 2 245557787665 22222222
Q ss_pred CCCceEEEEEcCCCEEEEEEC-CCCeEEEEecCCCCeEEEEECCCCCeeeEEEe
Q psy14258 355 LKRPSVIDYHEKEEYIYYAEL-TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVD 407 (440)
Q Consensus 355 ~~~p~~l~~d~~~~~vy~~d~-~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD 407 (440)
-..|.+|+++++++++|++.. ..++|..+++.......-+. -...|.||+++
T Consensus 313 g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~-vg~~P~~i~~~ 365 (368)
T 1mda_H 313 GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE-LDKGPESLSVQ 365 (368)
T ss_dssp EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC-CCSCCCEEECC
T ss_pred CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE-CCCCCCEEEee
Confidence 236999999999989999998 69999999998643222233 23689999986
No 116
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.03 E-value=1e-07 Score=93.64 Aligned_cols=278 Identities=6% Similarity=-0.093 Sum_probs=150.1
Q ss_pred eeEEEEeecccce-eeeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcC---------CCCceeEEeCCCCCc
Q psy14258 47 KTHLYETIEAFWE-ECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLN---------LSKPRGIALDPTSGY 116 (440)
Q Consensus 47 ~~ll~s~~~~~~~-~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~---------~~~I~~~~~~~~~~~ 116 (440)
..+++++...... +.|..+++......-.++.... + ++++++.+++||.++.. .+.|..++.. ..+
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~--t~~ 160 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV--TFL 160 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT--TCC
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC--CCc
Confidence 3477777621111 4499999987776644444332 8 99999999999999852 3445554433 222
Q ss_pred ceeeccccccceee--c---cccccce-eeeecCCcEEEe-----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCe
Q psy14258 117 MFFTKWGATRPMLE--R---SLLDGTE-RFPMVTHKIVYP-----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGY 185 (440)
Q Consensus 117 ~~~~~~~~~~v~~~--~---~~~~p~~-avD~~~~~lY~~-----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~ 185 (440)
.. ..+.+. . ....|.+ ++++.++.||++ +.|.+.|+.......-+.. |....+.|....
T Consensus 161 vv------~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v----~g~~~~~p~g~~ 230 (426)
T 3c75_H 161 PI------ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV----PDCYHIFPASPT 230 (426)
T ss_dssp EE------EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC----CSEEEEEEEETT
T ss_pred EE------EEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc----CCceeeccCCCc
Confidence 11 111110 0 1357999 999999999998 4799998886554322221 112223332234
Q ss_pred EEEEEcCCCCCcEEEEeCCCCCcee-----EEecCccCce--EEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-
Q psy14258 186 MFFTKWGATRPMLERSLLDGTERFP-----MVTHKIVYPY--GVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG- 257 (440)
Q Consensus 186 lywtd~~~~~~~I~r~~~dG~~~~~-----l~~~~~~~P~--gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~- 257 (440)
.|.+.... +++...++. .+... .+. .-..|. .+++++..+++|++.. .+.+..++..+.....+..-
T Consensus 231 ~~v~~~~d--G~~~~V~~~-~~~v~~~~~~~~~-v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~ 305 (426)
T 3c75_H 231 VFYMNCRD--GSLARVDFA-DGETKVTNTEVFH-TEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIE 305 (426)
T ss_dssp EEEEEETT--SSEEEEECC-TTCCEEEECCCCS-CTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEE
T ss_pred EEEEEcCC--CCEEEEECC-CCcEEEEeeeeec-cCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeee
Confidence 44444333 244444441 11111 011 011232 2355767788888764 57888888876554433210
Q ss_pred ----Cc---cCceee---eeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEE
Q psy14258 258 ----FP---VQNLYD---ITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLL 325 (440)
Q Consensus 258 ----~~---~~~p~g---l~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~ 325 (440)
.. ...|.| +++. ++++|+++.... .+. .++
T Consensus 306 ~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~--------~gt-------------------hk~----------- 347 (426)
T 3c75_H 306 ALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRD--------EWK-------------------HKA----------- 347 (426)
T ss_dssp SSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECC--------TTC-------------------TTS-----------
T ss_pred eccccccccccccCCceeeEEcCCCCEEEEEecccc--------ccc-------------------ccC-----------
Confidence 00 012433 4554 457887753100 000 000
Q ss_pred eecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCC-EEEEEECCCCeEEEEecCCCC
Q psy14258 326 YAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEE-YIYYAELTSYVIERRKMFGRG 389 (440)
Q Consensus 326 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~-~vy~~d~~~~~I~r~~~~g~~ 389 (440)
..+.|..|++... .. -..+++. ..|.+|+|+++++ .+|+++...+.|..+++....
T Consensus 348 ----~s~~VsVID~~T~-kv-v~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 348 ----ASRFVVVLNAETG-ER-INKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp ----CEEEEEEEETTTC-CE-EEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ----CCCEEEEEECCCC-eE-EEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 0023333333322 00 0122222 2589999999999 999999889999999997543
No 117
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.02 E-value=3.4e-07 Score=89.34 Aligned_cols=224 Identities=9% Similarity=0.006 Sum_probs=140.1
Q ss_pred CCCCeEEEEEcCCCCCcEEEEeCCCCCc-eeEEe----------cCccCceEEEEeCCCCEEEEEeCCC------CcEEE
Q psy14258 181 PTSGYMFFTKWGATRPMLERSLLDGTER-FPMVT----------HKIVYPYGVTVDFPTKHVYWVDTYL------DFIDR 243 (440)
Q Consensus 181 ~~~g~lywtd~~~~~~~I~r~~~dG~~~-~~l~~----------~~~~~P~gl~vD~~~~~ly~~d~~~------~~i~~ 243 (440)
+.+.+||.+...+ .+|...+..-..+ -.+.. .+...|.++.+-+.+ ||++..+. +.|..
T Consensus 93 ~~r~~l~v~~l~s--~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRS--SRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTT--CCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCC--CeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEE
Confidence 5578999999887 5999999853311 12221 134578889987554 99877655 57888
Q ss_pred EEccCCCc-EEEecCC-ccCceeeeeE--ecCEEEEEecC------------------CCeEEEEeccCCCceEEEecC-
Q psy14258 244 INYDGTDR-KTIRKGF-PVQNLYDITV--FENNLFVTSWR------------------NQSIIRVNKFNSDDYETIANF- 300 (440)
Q Consensus 244 ~~~dG~~~-~~i~~~~-~~~~p~gl~~--~~~~ly~td~~------------------~~~i~~~~~~~g~~~~~~~~~- 300 (440)
+|.....+ ..+..+. ....++.+.+ ..+.+|.++|. .++|..++..+++....+.-.
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 87664333 2222221 1122333444 35688888875 788998888776555444322
Q ss_pred --CCCeEEEEeccCCCCCCCCCc-eeEEeecC-----CccEEEEEEcCCCCCCce-eeeeecC-----------------
Q psy14258 301 --SRPFAIHIYHRQKQPDALKPS-TFLLYAKG-----KPAIIKGLTFKRDGTTEQ-AIMPITD----------------- 354 (440)
Q Consensus 301 --~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~-----~~~~I~~i~~~~~~~~~~-~~~~~~~----------------- 354 (440)
..|.++++.+ .|+ .++|++.. ..+.|..+..+.. .... ..+.+..
T Consensus 249 ~g~~P~~i~f~~--------~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~~~~~f~~~ 319 (462)
T 2ece_A 249 ENRMALELRPLH--------DPTKLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPEILKPFKAV 319 (462)
T ss_dssp TEEEEEEEEECS--------STTCCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCGGGGGGTEE
T ss_pred CCCccceeEeeE--------CCCCCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCccccccccccccccccC
Confidence 2466776532 122 46666655 4577766555432 1110 0110000
Q ss_pred CCCceEEEEEcCCCEEEEEECCCCeEEEEecC-CCCeEEEE--ECC-C-------------CCeeeEEEecCCCcEEEEe
Q psy14258 355 LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF-GRGKEVVI--DTG-I-------------YNVEGMAVDWMANNLYWTD 417 (440)
Q Consensus 355 ~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~-g~~~~~~~--~~~-~-------------~~~~glAvD~~~~~lYwtd 417 (440)
-..|.+|.+.+++++||+++...+.|..++.. ....+.+- ..| . ..|.+|++++.+++||+|+
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 14588999999999999999999999999974 33333332 222 1 2599999999999999999
No 118
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.99 E-value=9.6e-07 Score=83.53 Aligned_cols=261 Identities=10% Similarity=-0.031 Sum_probs=153.4
Q ss_pred EEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEecC
Q psy14258 85 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCTHY 159 (440)
Q Consensus 85 ~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~~d 159 (440)
|+++.. ++++|.+....+.|+..++....... .+.. .....|.+ ++++.++.+|++ +.|.+.+++
T Consensus 4 g~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~--------~~~~-~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~ 73 (349)
T 1jmx_B 4 GPALKA-GHEYMIVTNYPNNLHVVDVASDTVYK--------SCVM-PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLD 73 (349)
T ss_dssp CCCCCT-TCEEEEEEETTTEEEEEETTTTEEEE--------EEEC-SSCCSSCEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred cccccC-CCEEEEEeCCCCeEEEEECCCCcEEE--------EEec-CCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCC
Confidence 344443 47788888887888777664322110 1111 11125888 999988888988 689999988
Q ss_pred CceEEEEEcCC------CCCceEEEEcCCCCeEEEEEcC-----------CCCCcEEEEeCCCCCc-e--eEEecCccCc
Q psy14258 160 MEHCMIAIDLN------LSKPRGIALDPTSGYMFFTKWG-----------ATRPMLERSLLDGTER-F--PMVTHKIVYP 219 (440)
Q Consensus 160 g~~~~~~~~~~------~~~P~~iavd~~~g~lywtd~~-----------~~~~~I~r~~~dG~~~-~--~l~~~~~~~P 219 (440)
+......+... ...|.+++++|...+||.+... . ..|...++..... + .... ....+
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~--~~i~~~d~~~~~~~~~~~~~~-~~~~~ 150 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP--PRLEVFSTADGLEAKPVRTFP-MPRQV 150 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECC--CEEEEEEGGGGGGBCCSEEEE-CCSSC
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCC--CeEEEEECCCccccceeeecc-CCCcc
Confidence 65544333211 2348999999987789998843 2 4899988864221 1 1222 22357
Q ss_pred eEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc-EEEecCC----------------------ccCceeeeeEec------
Q psy14258 220 YGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR-KTIRKGF----------------------PVQNLYDITVFE------ 270 (440)
Q Consensus 220 ~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~-~~i~~~~----------------------~~~~p~gl~~~~------ 270 (440)
.++++++.+. ||+++ +.|..++...... ..+..+. .+..|.++++..
T Consensus 151 ~~~~~s~dg~-l~~~~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 226 (349)
T 1jmx_B 151 YLMRAADDGS-LYVAG---PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP 226 (349)
T ss_dssp CCEEECTTSC-EEEES---SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred cceeECCCCc-EEEcc---CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCc
Confidence 8888997666 88863 3488888754433 3332221 001455565542
Q ss_pred -----CEEEE-EecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCC-c-eeEEeecCCccEEEEEEcCCC
Q psy14258 271 -----NNLFV-TSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKP-S-TFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 271 -----~~ly~-td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~-~-~~l~~~~~~~~~I~~i~~~~~ 342 (440)
...|+ .+..++.+..++.. .....|.++.+. | + .+|+++ .+.|..+++...
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~s----------p~dg~~l~~~---~~~v~~~d~~~~ 285 (349)
T 1jmx_B 227 ATADLLYGYLSVDLKTGKTHTQEFA--------DLTELYFTGLRS----------PKDPNQIYGV---LNRLAKYDLKQR 285 (349)
T ss_dssp CCCEEEEEEEEEETTTCCEEEEEEE--------ECSSCEEEEEEC----------SSCTTEEEEE---ESEEEEEETTTT
T ss_pred cccccceeEEEEeccCCcEEecccc--------cCCCcceeeEec----------CCCCCEEEEE---cCeEEEEECccC
Confidence 22333 33333333332221 011234455443 3 3 466666 378999988655
Q ss_pred CCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 343 GTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 343 ~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
.....+..-..|.++++++.+++||++ ...+.|...++...
T Consensus 286 ----~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~~~v~v~d~~~~ 326 (349)
T 1jmx_B 286 ----KLIKAANLDHTYYCVAFDKKGDKLYLG-GTFNDLAVFNPDTL 326 (349)
T ss_dssp ----EEEEEEECSSCCCEEEECSSSSCEEEE-SBSSEEEEEETTTT
T ss_pred ----eEEEEEcCCCCccceEECCCCCEEEEe-cCCCeEEEEecccc
Confidence 222222233468899999999999986 45689999998754
No 119
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=2.3e-08 Score=100.71 Aligned_cols=266 Identities=11% Similarity=0.024 Sum_probs=173.5
Q ss_pred cCCcEEEe----ceEEEEecCCceEEEEEcCC-CCCceEEEEc--CCCCeEEEEEcCC---------------CCCcEEE
Q psy14258 143 VTHKIVYP----EAIYFCTHYMEHCMIAIDLN-LSKPRGIALD--PTSGYMFFTKWGA---------------TRPMLER 200 (440)
Q Consensus 143 ~~~~lY~~----~~I~~~~~dg~~~~~~~~~~-~~~P~~iavd--~~~g~lywtd~~~---------------~~~~I~r 200 (440)
.++.||++ .+|.|.+++...+..++... ...|+|+++. |..+++|.+.... ....+..
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 57789999 78999999998877666543 3679999984 8889999995210 0125555
Q ss_pred EeCCCCCceeEEecCc-cCceEEEEeCCCCEEEEEeCCCCcEEEEEc-cCCCcEEEecCCccCceeeee-E-ecCEEEEE
Q psy14258 201 SLLDGTERFPMVTHKI-VYPYGVTVDFPTKHVYWVDTYLDFIDRINY-DGTDRKTIRKGFPVQNLYDIT-V-FENNLFVT 276 (440)
Q Consensus 201 ~~~dG~~~~~l~~~~~-~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~-dG~~~~~i~~~~~~~~p~gl~-~-~~~~ly~t 276 (440)
.+.+ ..+++.+-.+ +.|.++++++.++++|++...++....++- ....+..+.- +..|...+ + .++..|.
T Consensus 180 ID~~--t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V---~~~~~~~~~v~~Gk~~~i- 253 (595)
T 1fwx_A 180 VDAD--KWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVV---FNIAEIEKAIAAGDYQEL- 253 (595)
T ss_dssp EETT--TTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEE---EEHHHHHHHHHHTCSEEE-
T ss_pred EECC--CCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEE---eeccceeEeccCCCeeEE-
Confidence 5555 4444443322 479999999999999999976654322221 1122222221 11122111 1 2345554
Q ss_pred ecCCCeEEEEeccC--CCc-eEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCC-------CC
Q psy14258 277 SWRNQSIIRVNKFN--SDD-YETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDG-------TT 345 (440)
Q Consensus 277 d~~~~~i~~~~~~~--g~~-~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~-------~~ 345 (440)
+.|..++..+ ++. ...+.....|.++.+. |+ .++++++.....|..++++... ..
T Consensus 254 ----~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~s----------PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~ 319 (595)
T 1fwx_A 254 ----NGVKVVDGRKEASSLFTRYIPIANNPHGCNMA----------PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADP 319 (595)
T ss_dssp ----TTEEEEECSGGGCCSSEEEEEEESSCCCEEEC----------TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCG
T ss_pred ----CcEEEEeCcccCCceeEEEEecCCCceEEEEc----------CCCCEEEEeCCCCCeEEEEECcccccccccccCc
Confidence 4577788766 444 3344444468888776 44 7899999888999999987430 00
Q ss_pred -ceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC--------CeEEEE--ECCCCCe------eeEEEec
Q psy14258 346 -EQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR--------GKEVVI--DTGIYNV------EGMAVDW 408 (440)
Q Consensus 346 -~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~--------~~~~~~--~~~~~~~------~glAvD~ 408 (440)
..+...+.--..|..++||+.+ .+|.+..-++.|.+.+.+.. ..+++- ..+ ..| .|+++.+
T Consensus 320 ~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~-yqpGh~~~~~g~t~~~ 397 (595)
T 1fwx_A 320 RSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVH-YQPGHLKTVMGETLDA 397 (595)
T ss_dssp GGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECS-SCEEEEEETTTTSTTC
T ss_pred ccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecc-cccccceeccceEeCC
Confidence 1122233333479999999987 89999999999999998751 122222 222 233 6788899
Q ss_pred CCCcEEEEeCCC-CeE-----------EEEEeCC
Q psy14258 409 MANNLYWTDAGI-GTI-----------NVAKISD 430 (440)
Q Consensus 409 ~~~~lYwtd~~~-~~I-----------~~~~~~g 430 (440)
.++.||.++..+ +++ ..+++.|
T Consensus 398 DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 398 TNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp CSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred CCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 999999999887 787 8888887
No 120
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.93 E-value=5.7e-08 Score=92.92 Aligned_cols=191 Identities=9% Similarity=-0.017 Sum_probs=123.1
Q ss_pred EEEEEeeecccEEEEEE------------cCCCCceeEEeCCCCCcceeeccccccceeec-----cccccce-eeeec-
Q psy14258 83 AIYFCTHYMEHCMIAID------------LNLSKPRGIALDPTSGYMFFTKWGATRPMLER-----SLLDGTE-RFPMV- 143 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d------------~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~-----~~~~p~~-avD~~- 143 (440)
+..|++++ ++.+|.+. ...++|++++++...... ..+.+.. .--+|.| .+...
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-------~~l~~~g~~~~~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-------SELEIIGNTLDISSFNPHGISTFIDD 123 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCE-------EECEEECSSCCGGGCCEEEEEEEECT
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-------EEEEccCCCCCcCceeeeeeEEEECC
Confidence 56666665 46777775 245677777765322111 1111211 2348999 88663
Q ss_pred --CCcEEEe------ceE--EEEecCCceEEEEEc---CCCCCceEEEEcCCCCeEEEEEcC---------------CCC
Q psy14258 144 --THKIVYP------EAI--YFCTHYMEHCMIAID---LNLSKPRGIALDPTSGYMFFTKWG---------------ATR 195 (440)
Q Consensus 144 --~~~lY~~------~~I--~~~~~dg~~~~~~~~---~~~~~P~~iavd~~~g~lywtd~~---------------~~~ 195 (440)
...||++ .+| ++.+.++...+.+.. ..+..|.++++|+ .|.+|+++.. ...
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~ 202 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAW 202 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCC
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCc
Confidence 2258888 344 445555554433322 3568899999999 6888888641 112
Q ss_pred CcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCC----cEEEecCCccCceeeeeEec-
Q psy14258 196 PMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTD----RKTIRKGFPVQNLYDITVFE- 270 (440)
Q Consensus 196 ~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~----~~~i~~~~~~~~p~gl~~~~- 270 (440)
++|+|.+.+ . ..++..++..||||++++.+++||++|...++|++.++++.. ++.+ .- -..|-|++++.
T Consensus 203 g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~--~g~PDGi~vD~e 276 (355)
T 3sre_A 203 SFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SF--DTLVDNISVDPV 276 (355)
T ss_dssp EEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-EC--SSEEEEEEECTT
T ss_pred cEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eC--CCCCceEEEeCC
Confidence 578888873 2 334456788999999999999999999999999999986422 2233 21 35799999995
Q ss_pred -CEEEEEe-cCCCeEEEEec
Q psy14258 271 -NNLFVTS-WRNQSIIRVNK 288 (440)
Q Consensus 271 -~~ly~td-~~~~~i~~~~~ 288 (440)
+.||++. |...+|.+.++
T Consensus 277 ~G~lwva~~~~g~~v~~~~P 296 (355)
T 3sre_A 277 TGDLWVGCHPNGMRIFFYDA 296 (355)
T ss_dssp TCCEEEEEESCHHHHHSCCT
T ss_pred CCcEEEEecCCceEEEEECC
Confidence 5898865 55566665554
No 121
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.91 E-value=3.3e-07 Score=91.07 Aligned_cols=243 Identities=7% Similarity=-0.017 Sum_probs=146.2
Q ss_pred ecccceEEEEEeeeccc-EEEEEEcCCCCceeEEeCCCCC-cceeeccccccceee----ccccccce-eeeec---CCc
Q psy14258 77 LTFAQEAIYFCTHYMEH-CMIAIDLNLSKPRGIALDPTSG-YMFFTKWGATRPMLE----RSLLDGTE-RFPMV---THK 146 (440)
Q Consensus 77 ~~~~~~~~~i~~d~~~~-~ly~~d~~~~~I~~~~~~~~~~-~~~~~~~~~~~v~~~----~~~~~p~~-avD~~---~~~ 146 (440)
.+.. |++|++.+... +||+++.. ++|+.+..++... +.+. ..+.+... .+...+-+ |+++. ++.
T Consensus 12 gL~~--P~~~a~~pdG~~rl~V~er~-G~i~~~~~~g~~~~~~~~---~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~ 85 (463)
T 2wg3_C 12 GLRQ--PVGALHSGDGSQRLFILEKE-GYVKILTPEGEIFKEPYL---DIHKLVQSGIKGGDERGLLSLAFHPNYKKNGK 85 (463)
T ss_dssp EESS--EEEEECCSSSSCCEEEEETT-TEEEEECTTSCBCSSCSE---ECTTTBCCCCSSSCCCSEEEEEECTTHHHHCE
T ss_pred CCCC--ceEEEECCCCCeEEEEEeCC-ceEEEEeCCCCeeeeeec---CCcceeccCccccCCCcceeeEeCCCCcCCCE
Confidence 3566 99999999874 79999975 7787765444321 1110 11111111 11356778 99875 678
Q ss_pred EEEe-c---------------eEEEEecCC--------ceEEEEEc----CCCCCceEEEEcCCCCeEEEEEcCC-----
Q psy14258 147 IVYP-E---------------AIYFCTHYM--------EHCMIAID----LNLSKPRGIALDPTSGYMFFTKWGA----- 193 (440)
Q Consensus 147 lY~~-~---------------~I~~~~~dg--------~~~~~~~~----~~~~~P~~iavd~~~g~lywtd~~~----- 193 (440)
||++ . +|.+..++. ...++|+. ........|+++| .|+||++--..
T Consensus 86 lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~ 164 (463)
T 2wg3_C 86 LYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLD 164 (463)
T ss_dssp EEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHH
T ss_pred EEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCC
Confidence 9988 1 677777642 12344443 2346678999999 69999994321
Q ss_pred ----------CCCcEEEEeCCCCC-------------------ceeEEecCccCceEEEEeCCCC------EEEEEeC-C
Q psy14258 194 ----------TRPMLERSLLDGTE-------------------RFPMVTHKIVYPYGVTVDFPTK------HVYWVDT-Y 237 (440)
Q Consensus 194 ----------~~~~I~r~~~dG~~-------------------~~~l~~~~~~~P~gl~vD~~~~------~ly~~d~-~ 237 (440)
..++|.|++.||+. +.++....+..|.||++|+.++ ++|.+|. +
T Consensus 165 ~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G 244 (463)
T 2wg3_C 165 DMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNG 244 (463)
T ss_dssp HHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC--
T ss_pred ccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCC
Confidence 13689999999951 3468888899999999998754 6787885 2
Q ss_pred C----CcEEEEEccCCCc---EEEec-CC-ccCceeeeeEecC--------EEEEEecCCCeEEEEeccCCC-c-e-EEE
Q psy14258 238 L----DFIDRINYDGTDR---KTIRK-GF-PVQNLYDITVFEN--------NLFVTSWRNQSIIRVNKFNSD-D-Y-ETI 297 (440)
Q Consensus 238 ~----~~i~~~~~dG~~~---~~i~~-~~-~~~~p~gl~~~~~--------~ly~td~~~~~i~~~~~~~g~-~-~-~~~ 297 (440)
. ..|..+. .|.+. .-+.. .. .-..|.|++++.+ .++++++. ++|+++....+. . . +.+
T Consensus 245 ~~~~~~ei~~i~-~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~-g~i~~~~~~~~~~~~~~~~~ 322 (463)
T 2wg3_C 245 KNRSSARILQII-KGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRN-GNFLTLQQSPVTKQWQEKPL 322 (463)
T ss_dssp ----CEEEEEEC-----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETT-SCEEEEEC-----CCEEEEE
T ss_pred CCCCCCeEeeec-cCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCC-CcEEEEEeCCCCceeeEEEe
Confidence 1 2344432 23211 11111 10 0136788888654 37889986 778888654332 1 1 122
Q ss_pred -ec---------CCCCeEEEEeccCCCCCCCCCceeEEeecC-------CccEEEEEE
Q psy14258 298 -AN---------FSRPFAIHIYHRQKQPDALKPSTFLLYAKG-------KPAIIKGLT 338 (440)
Q Consensus 298 -~~---------~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~-------~~~~I~~i~ 338 (440)
.. ..+|.++.+. |++.||+++. ..++|+||.
T Consensus 323 ~~g~~~~~~~~~~~r~~~v~~~----------pdG~Lyv~~~~~~~~~~~~G~I~Ri~ 370 (463)
T 2wg3_C 323 CLGTSGSCRGYFSGHILGFGED----------ELGEVYILSSSKSMTQTHNGKLYKIV 370 (463)
T ss_dssp CEEETTSSCSCCCSEEEEEEEC----------TTCCEEEEEESSCGGGCSSEEEEEEE
T ss_pred ecCCcccccccccCcceEEEEC----------CCCCEEEEeccCCcccCCCCcEEEec
Confidence 11 1245555444 6788888875 358999997
No 122
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.85 E-value=3.3e-06 Score=78.17 Aligned_cols=206 Identities=12% Similarity=0.029 Sum_probs=130.9
Q ss_pred ceEEEEec-CCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCC
Q psy14258 151 EAIYFCTH-YMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTK 229 (440)
Q Consensus 151 ~~I~~~~~-dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~ 229 (440)
++|...+. +|+..-.+-......|.+++++| +|.+|++. . ..|...+.+|.....+-...-..+.+..+. .++
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilvs~-~---~~V~~~d~~G~~~W~~~~~~~~~~~~~~~~-~dG 88 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILFSY-S---KGAKMITRDGRELWNIAAPAGCEMQTARIL-PDG 88 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEEEC-B---SEEEEECTTSCEEEEEECCTTCEEEEEEEC-TTS
T ss_pred CEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEEeC-C---CCEEEECCCCCEEEEEcCCCCccccccEEC-CCC
Confidence 56677777 66554444332224689999999 68888853 2 489999998865544432111234566665 567
Q ss_pred EEEEEeCC-CCcEEEEEccCCCcEEEecCC----ccCceeeeeEec-CEEEEEecCCCeEEEEeccCCCceEEEecCCCC
Q psy14258 230 HVYWVDTY-LDFIDRINYDGTDRKTIRKGF----PVQNLYDITVFE-NNLFVTSWRNQSIIRVNKFNSDDYETIANFSRP 303 (440)
Q Consensus 230 ~ly~~d~~-~~~i~~~~~dG~~~~~i~~~~----~~~~p~gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p 303 (440)
++++++.. .+++..++.+|..+..+.... ....|.++++.. +.+++++..++.|..+++. |+..-.+.....|
T Consensus 89 ~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~ 167 (276)
T 3no2_A 89 NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTP 167 (276)
T ss_dssp CEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCC
T ss_pred CEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCc
Confidence 77888876 778999998888765554211 123466677654 4788899889999999986 7765555444456
Q ss_pred eEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcC-CCCCCceee---eeecCCCCceEEEEEcCCCEEEEEEC
Q psy14258 304 FAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFK-RDGTTEQAI---MPITDLKRPSVIDYHEKEEYIYYAEL 375 (440)
Q Consensus 304 ~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~-~~~~~~~~~---~~~~~~~~p~~l~~d~~~~~vy~~d~ 375 (440)
.++.+. +++.+++++...++|..++.+ +. ..-... ++-..+..|.+++..+. +.+|+++.
T Consensus 168 ~~~~~~----------~~g~~~v~~~~~~~v~~~d~~tG~-~~w~~~~~~~~~~~l~~~~~~~~~~~-G~i~v~~~ 231 (276)
T 3no2_A 168 FSSAFL----------DNGDCLVACGDAHCFVQLNLESNR-IVRRVNANDIEGVQLFFVAQLFPLQN-GGLYICNW 231 (276)
T ss_dssp CEEEEC----------TTSCEEEECBTTSEEEEECTTTCC-EEEEEEGGGSBSCCCSEEEEEEECTT-SCEEEEEE
T ss_pred cceeEc----------CCCCEEEEeCCCCeEEEEeCcCCc-EEEEecCCCCCCccccccccceEcCC-CCEEEEec
Confidence 665544 355566666656788888877 44 100000 00012345788888875 55889984
No 123
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.83 E-value=3.2e-06 Score=81.63 Aligned_cols=287 Identities=6% Similarity=-0.118 Sum_probs=160.7
Q ss_pred eeEEEEeecccc-eeeeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcC---------CCCceeEEeCCCCCc
Q psy14258 47 KTHLYETIEAFW-EECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLN---------LSKPRGIALDPTSGY 116 (440)
Q Consensus 47 ~~ll~s~~~~~~-~~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~---------~~~I~~~~~~~~~~~ 116 (440)
..+++++...+. .+.|..++.......-.++.... +. +++++.+++||.++.. .+.|..++.. ..+
T Consensus 45 ~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~--t~~ 120 (386)
T 3sjl_D 45 RRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-PN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV--TLL 120 (386)
T ss_dssp TEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-CE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT--TCC
T ss_pred CEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-Cc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC--CCe
Confidence 356677654211 25699999887766534443332 64 9999999999999852 2344444333 222
Q ss_pred ceeeccccccceeec-----cccccce-eeeecCCcEEEe-----ceEEEEecCCceEEEEEcCC---CCCceE----EE
Q psy14258 117 MFFTKWGATRPMLER-----SLLDGTE-RFPMVTHKIVYP-----EAIYFCTHYMEHCMIAIDLN---LSKPRG----IA 178 (440)
Q Consensus 117 ~~~~~~~~~~v~~~~-----~~~~p~~-avD~~~~~lY~~-----~~I~~~~~dg~~~~~~~~~~---~~~P~~----ia 178 (440)
.+ ..+.+.. ....|.+ ++++.++.||++ +.|.+.++.......-+... ...|.+ ++
T Consensus 121 v~------~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 121 PT------ADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM 194 (386)
T ss_dssp EE------EEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred EE------EEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEE
Confidence 11 1111111 1347999 999999999998 46889888765543222211 112333 24
Q ss_pred EcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCce--EEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec
Q psy14258 179 LDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPY--GVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK 256 (440)
Q Consensus 179 vd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~--gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~ 256 (440)
+.+ .|.+.+.+.+.. +++.... ..++. ....|. ..+++...++++|+.. .+.+..++..+..++.+..
T Consensus 195 ~~~-DG~~~~v~~~~~-g~v~~~~------~~~~~-~~~~~~~~~~~~~~~dG~~~~vs~-~g~V~v~d~~~~~~~v~~~ 264 (386)
T 3sjl_D 195 HCR-DGSLAKVAFGTE-GTPEITH------TEVFH-PEDEFLINHPAYSQKAGRLVWPTY-TGKIHQIDLSSGDAKFLPA 264 (386)
T ss_dssp EET-TSCEEEEECCSS-SCCEEEE------CCCCS-CTTSCBCSCCEEETTTTEEEEEBT-TSEEEEEECTTSSCEECCC
T ss_pred ECC-CCCEEEEECCCC-CeEEEee------cceec-cccccccccceeEcCCCcEEEEeC-CCEEEEEECCCCcceeecc
Confidence 444 344444443321 2321111 01111 011122 1356666788877654 5789999988776554322
Q ss_pred CC-------------ccCceeeeeEecCEEEEEec---------CCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCC
Q psy14258 257 GF-------------PVQNLYDITVFENNLFVTSW---------RNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQ 314 (440)
Q Consensus 257 ~~-------------~~~~p~gl~~~~~~ly~td~---------~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~q 314 (440)
-. .-..+.++.-.++++|++.. ..+.|+.+|..+++....+.-...|.++.+..
T Consensus 265 ~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~---- 340 (386)
T 3sjl_D 265 VEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQ---- 340 (386)
T ss_dssp EESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECS----
T ss_pred eeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECC----
Confidence 00 01123334334569999863 23679999998887776554334577777762
Q ss_pred CCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc
Q psy14258 315 PDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE 365 (440)
Q Consensus 315 p~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~ 365 (440)
+.+..||.++...+.|..++.... .....+.....|..|.+.+
T Consensus 341 ----D~~~~ly~tn~~~~~VsViD~~t~----k~~~~i~~~~~p~~l~~s~ 383 (386)
T 3sjl_D 341 ----DEKPLLYALSTGDKTLYIHDAESG----EELRSVNQLGHGPQVITTA 383 (386)
T ss_dssp ----SSSCEEEEEETTTTEEEEEETTTC----CEEEEECCCCSSCCEEEEC
T ss_pred ----CCCeEEEEEcCCCCeEEEEECCCC----cEEEEecCCCCCceeEECC
Confidence 112467777766678888887554 3444555555666665554
No 124
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.83 E-value=5.6e-06 Score=87.26 Aligned_cols=325 Identities=9% Similarity=0.006 Sum_probs=190.5
Q ss_pred EEEEEeeecccEEEEEEcCCC-----CceeEEeCCCCCcceeeccccc----cceee----------ccccccce-eeee
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLS-----KPRGIALDPTSGYMFFTKWGAT----RPMLE----------RSLLDGTE-RFPM 142 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~-----~I~~~~~~~~~~~~~~~~~~~~----~v~~~----------~~~~~p~~-avD~ 142 (440)
+..+++.+.+++|+++....+ .|+..++++.....+....... .+... .+...+.. ++.+
T Consensus 39 ~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~Sp 118 (741)
T 2ecf_A 39 LMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSP 118 (741)
T ss_dssp CEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECT
T ss_pred CCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECC
Confidence 788999999899988876333 6777776654322210000000 00000 00012567 8888
Q ss_pred cCCcEEEe--ceEEEEecCCc---eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCc-
Q psy14258 143 VTHKIVYP--EAIYFCTHYME---HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKI- 216 (440)
Q Consensus 143 ~~~~lY~~--~~I~~~~~dg~---~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~- 216 (440)
.++.|+++ +.|.+.++++. ..+.+.. ....+..+++.|...+|.++.. ..|+..++++.....+.....
T Consensus 119 Dg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~----~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 119 DAQRLLFPLGGELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG----RNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp TSSEEEEEETTEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET----TEEEEEETTTTEEEECCCCCCS
T ss_pred CCCEEEEEeCCcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC----CcEEEEecCCCCEEEeccCCcc
Confidence 88888888 78999999876 5444332 3356889999997777887763 379999998754443332211
Q ss_pred ---------------cCceEEEEeCCCCEEEEEeCCCC--------------------------------cEEEEEccC-
Q psy14258 217 ---------------VYPYGVTVDFPTKHVYWVDTYLD--------------------------------FIDRINYDG- 248 (440)
Q Consensus 217 ---------------~~P~gl~vD~~~~~ly~~d~~~~--------------------------------~i~~~~~dG- 248 (440)
..+.++++.+.+.+|+++..... .|..+++++
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 11477999999999988743221 677777776
Q ss_pred CCcEEEecC-CccCceeeeeE-ecCEEEEEec----CCCeEEEEeccCCCceEEEecCCC-----CeEEEEeccCCCCCC
Q psy14258 249 TDRKTIRKG-FPVQNLYDITV-FENNLFVTSW----RNQSIIRVNKFNSDDYETIANFSR-----PFAIHIYHRQKQPDA 317 (440)
Q Consensus 249 ~~~~~i~~~-~~~~~p~gl~~-~~~~ly~td~----~~~~i~~~~~~~g~~~~~~~~~~~-----p~~~~v~~~~~qp~~ 317 (440)
.....+... .....+..+++ ++..|+++.. ....|+.++..+++...++..... ...+.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s-------- 345 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL-------- 345 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEEEETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC--------
T ss_pred CceEEecCCCCcceEEEEEEeCCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC--------
Confidence 655554322 11123344554 3347776643 245688888877765554432111 0122211
Q ss_pred CCCceeEEeecCCc--cEEEEEEcCCCCCCceeeeeecCC-CCceEE-EEEcCCCEEEEEECC----CCeEEEEecCCCC
Q psy14258 318 LKPSTFLLYAKGKP--AIIKGLTFKRDGTTEQAIMPITDL-KRPSVI-DYHEKEEYIYYAELT----SYVIERRKMFGRG 389 (440)
Q Consensus 318 ~~~~~~l~~~~~~~--~~I~~i~~~~~~~~~~~~~~~~~~-~~p~~l-~~d~~~~~vy~~d~~----~~~I~r~~~~g~~ 389 (440)
|++-++++.... ..|+.+++++. ...+... .....+ ++++.++.||++... ...|++++.+|..
T Consensus 346 --pdg~~~~~~~~~g~~~l~~~~~~~~------~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~ 417 (741)
T 2ecf_A 346 --DDGSILWSSERTGFQHLYRIDSKGK------AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQ 417 (741)
T ss_dssp --TTSCEEEEECTTSSCEEEEECSSSC------EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCC
T ss_pred --CCCeEEEEecCCCccEEEEEcCCCC------eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCC
Confidence 333244443332 35666665433 2222221 223355 599999999888654 3468999888765
Q ss_pred eEEEEECCCCCeeeEEEecCCCcEEEEeCCC---CeEEEEEeCC
Q psy14258 390 KEVVIDTGIYNVEGMAVDWMANNLYWTDAGI---GTINVAKISD 430 (440)
Q Consensus 390 ~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~---~~I~~~~~~g 430 (440)
.+.+.. ......+++.+.++.|.++-... ..+.+.+++|
T Consensus 418 ~~~l~~--~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~ 459 (741)
T 2ecf_A 418 PQRLSK--APGMHSASFARNASVYVDSWSNNSTPPQIELFRANG 459 (741)
T ss_dssp CEECCC--SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTS
T ss_pred eeeccc--CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCC
Confidence 554432 35567889998888887764332 4577777777
No 125
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.78 E-value=0.00025 Score=71.97 Aligned_cols=310 Identities=9% Similarity=0.007 Sum_probs=185.7
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.++++.+..+.|.-... .+.|...+.++..+.. +......+.+ ++.+.+..|..+ +.|.+.+
T Consensus 223 ~v~~~~~s~dg~~l~~~~~-d~~i~~w~~~~~~~~~-----------~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~ 290 (577)
T 2ymu_A 223 SVRGVAFSPDGQTIASASD-DKTVKLWNRNGQLLQT-----------LTGHSSSVNGVAFRPDGQTIASASDDKTVKLWN 290 (577)
T ss_dssp CEEEEEECTTSSCEEEEET-TSCEEEECTTSCEEEE-----------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEECCCCCEEEEEeC-CCEEEEEeCCCCEEEE-----------EecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEe
Confidence 3889999988776665544 3555444333221111 2222334556 777666655544 6788888
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
.++.....+. .......++++.|....|.-.. .. +.|...++++.....+. ..-..+.++++.+.+..|.... .
T Consensus 291 ~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~-~d--~~i~~w~~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~-~ 364 (577)
T 2ymu_A 291 RNGQLLQTLT-GHSSSVWGVAFSPDGQTIASAS-DD--KTVKLWNRNGQHLQTLT-GHSSSVWGVAFSPDGQTIASAS-D 364 (577)
T ss_dssp TTSCEEEEEC-CCSSCEEEEEECTTSSEEEEEE-TT--SCEEEEETTSCEEEEEC-CCSSCEEEEEECTTSSEEEEEE-T
T ss_pred CCCcEEEEEe-cCCCCeEEEEECCCCCEEEEEe-CC--CeEEEEeCCCCeeEEEe-CCCCCEEEEEECCCCCEEEEEe-C
Confidence 8887666553 3446788999999544444433 32 57888888876554432 2234567899987777776654 4
Q ss_pred CCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCC
Q psy14258 238 LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQP 315 (440)
Q Consensus 238 ~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp 315 (440)
.+.|...+.++.....+... -....++++..+ ....+-...+.|...+. +++....+..-. ...++.+.
T Consensus 365 dg~v~~~~~~~~~~~~~~~~--~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s------ 435 (577)
T 2ymu_A 365 DKTVKLWNRNGQLLQTLTGH--SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFS------ 435 (577)
T ss_dssp TSEEEEEETTCCEEEEEECC--SSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEEC------
T ss_pred CCEEEEEcCCCCEEEEecCC--CCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEEC------
Confidence 56777777777655554432 234667777654 33333334566666664 454444443322 33444433
Q ss_pred CCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE
Q psy14258 316 DALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI 394 (440)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~ 394 (440)
|++.++++-+..+.|+..++++. . ...+.+ -....+++|.+.+..|..+ ...+.|+.-+.+|.....+
T Consensus 436 ----~d~~~l~~~~~d~~v~~w~~~~~----~-~~~~~~~~~~v~~~~~spd~~~las~-~~d~~i~iw~~~~~~~~~~- 504 (577)
T 2ymu_A 436 ----PDDQTIASASDDKTVKLWNRNGQ----L-LQTLTGHSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQTL- 504 (577)
T ss_dssp ----TTSSEEEEEETTSEEEEEETTSC----E-EEEEECCSSCEEEEEECTTSCEEEEE-ETTSEEEEEETTSCEEEEE-
T ss_pred ----CCCCEEEEEcCCCEEEEEECCCC----E-EEEEcCCCCCEEEEEEcCCCCEEEEE-eCCCEEEEEcCCCCEEEEE-
Confidence 33223333333477877776554 2 222222 2356789999987765444 4678888888877544444
Q ss_pred ECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 395 DTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 395 ~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
...-..+..|++.+.++.|.-+. ..+.|.+.+.+|
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~-~dg~v~lwd~~~ 539 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNG 539 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTS
T ss_pred eCCCCCEEEEEEcCCCCEEEEEE-CcCEEEEEeCCC
Confidence 33446789999998777666554 457899998888
No 126
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.77 E-value=2e-07 Score=93.94 Aligned_cols=290 Identities=7% Similarity=-0.069 Sum_probs=176.4
Q ss_pred cccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-ee-e-ecCCcEEEe-----------------
Q psy14258 91 MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF-P-MVTHKIVYP----------------- 150 (440)
Q Consensus 91 ~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-av-D-~~~~~lY~~----------------- 150 (440)
.+++||++|..+++|.+++++.-....+ + -......|+| ++ . +.++.+|++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~i--------i-~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~ 170 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAI--------L-EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDV 170 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEE--------E-ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCG
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeE--------E-eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccc
Confidence 6789999999999999988764332211 1 1134467999 97 4 788889888
Q ss_pred ----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeC
Q psy14258 151 ----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDF 226 (440)
Q Consensus 151 ----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~ 226 (440)
+.+.+.+.+.....--+..+ .+|.+++++|..+++|+|...++.... ...+.-..+..+.- +.+|...+...
T Consensus 171 ~~~~~~vtvID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~-i~~~~~~~~d~v~V--~~~~~~~~~v~ 246 (595)
T 1fwx_A 171 ANYVNVFTAVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMT-LPEMTAAEMDHIVV--FNIAEIEKAIA 246 (595)
T ss_dssp GGEEEEEEEEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSS-HHHHTCCSEEEEEE--EEHHHHHHHHH
T ss_pred cccCceEEEEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcc-hhhccccccceEEE--eeccceeEecc
Confidence 15777777754432222212 379999999999999999977641100 01111112121211 11222222222
Q ss_pred CCCEEEEEeCCCCcEEEEEccC---CC-cEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCc-------
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDG---TD-RKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDD------- 293 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG---~~-~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~------- 293 (440)
.++++|+ +.+..+|... .. ...+..+ ..|.|+.+..| ++|+++...+.|..++..+.+.
T Consensus 247 ~Gk~~~i-----~~V~VID~~~~~~~~~~~~Ipvg---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~ 318 (595)
T 1fwx_A 247 AGDYQEL-----NGVKVVDGRKEASSLFTRYIPIA---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD 318 (595)
T ss_dssp HTCSEEE-----TTEEEEECSGGGCCSSEEEEEEE---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC
T ss_pred CCCeeEE-----CcEEEEeCcccCCceeEEEEecC---CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC
Confidence 3455664 4477777643 33 3444433 47999998754 9999999999999998764321
Q ss_pred ----e-EEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC-----C-CCceeeeeecCCCCc----
Q psy14258 294 ----Y-ETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD-----G-TTEQAIMPITDLKRP---- 358 (440)
Q Consensus 294 ----~-~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~-----~-~~~~~~~~~~~~~~p---- 358 (440)
. ..+.....|.++++. +++++|++....+.|..++++.. + ....+.-.+...-+|
T Consensus 319 ~~~~v~~~v~vG~gP~h~aF~----------~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 319 PRSAVVAEPELGLGPLHTAFD----------GRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp GGGGEEECCBCCSCEEEEEEC----------TTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred cccceEEEcCCCCCcceEEEC----------CCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 1 112223368888766 56788888777789999998761 0 111122122211234
Q ss_pred --eEEEEEcCCCEEEEEECCC-CeE-----------EEEecCCCCeEEEEE-CCCCCeeeEEEecCCC
Q psy14258 359 --SVIDYHEKEEYIYYAELTS-YVI-----------ERRKMFGRGKEVVID-TGIYNVEGMAVDWMAN 411 (440)
Q Consensus 359 --~~l~~d~~~~~vy~~d~~~-~~I-----------~r~~~~g~~~~~~~~-~~~~~~~glAvD~~~~ 411 (440)
.|+...+++++||.++..+ .++ ..++..|...+.+.. .-...|...+++..+.
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~~ 456 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPSI 456 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTTT
T ss_pred eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHHH
Confidence 4566789999999999876 565 566666655544432 1247899999987553
No 127
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.74 E-value=0.00016 Score=67.43 Aligned_cols=312 Identities=8% Similarity=-0.087 Sum_probs=180.4
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe--ceEEEEecC
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP--EAIYFCTHY 159 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~--~~I~~~~~d 159 (440)
+.++++.+.++.+.++.... .+... ..... ...+.....-..+.. ++.+.++.|+.+ +.|.+.+++
T Consensus 12 v~~~~~s~dg~~~~~~~~~~-~~~~~----~~~~~------~~~~~~~~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~ 80 (337)
T 1gxr_A 12 AYSFHVTADGQMQPVPFPPD-ALIGP----GIPRH------ARQINTLNHGEVVCAVTISNPTRHVYTGGKGCVKVWDIS 80 (337)
T ss_dssp CCEEEECSSSCEEECCCCTT-SSSST----TCCSE------EEEEEEECCSSCCCEEEECSSSSEEEEECBSEEEEEETT
T ss_pred eeEEEECCCCCEEEeecCCC-cEecc----ccCCc------cccceeccCCCceEEEEEecCCcEEEEcCCCeEEEEECC
Confidence 67788988877666555432 22110 00000 011111223334555 676666655554 788888876
Q ss_pred CceE----EEEEc-CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeE--EecCccCceEEEEeCCCCEEE
Q psy14258 160 MEHC----MIAID-LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPM--VTHKIVYPYGVTVDFPTKHVY 232 (440)
Q Consensus 160 g~~~----~~~~~-~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l--~~~~~~~P~gl~vD~~~~~ly 232 (440)
.... ..+-. ........+++.|...+|+..... +.|...+++....... ..........+++.+.+..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 157 (337)
T 1gxr_A 81 HPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCF 157 (337)
T ss_dssp STTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEE
T ss_pred CCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEE
Confidence 5321 11111 234568899999965556655544 5888888876653222 222334567899987777777
Q ss_pred EEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEecc
Q psy14258 233 WVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHR 311 (440)
Q Consensus 233 ~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~ 311 (440)
.+. ..+.|...++........... .......+++..+ ..+++-...+.|...+..+++....+.....+..+.+.
T Consensus 158 ~~~-~dg~v~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s-- 233 (337)
T 1gxr_A 158 SCC-SDGNIAVWDLHNQTLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYC-- 233 (337)
T ss_dssp EEE-TTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEC--
T ss_pred EEe-CCCcEEEEeCCCCceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEEC--
Confidence 665 456788888765543333332 1345677777644 34444445788888887766554444332234444433
Q ss_pred CCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCe
Q psy14258 312 QKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGK 390 (440)
Q Consensus 312 ~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~ 390 (440)
|+ .+|+++. ..+.|+.+++... ...........+..+++.+.++.++.+. ..+.|...++.....
T Consensus 234 --------~~~~~l~~~~-~~~~i~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 234 --------PTGEWLAVGM-ESSNVEVLHVNKP----DKYQLHLHESCVLSLKFAYCGKWFVSTG-KDNLLNAWRTPYGAS 299 (337)
T ss_dssp --------TTSSEEEEEE-TTSCEEEEETTSS----CEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCE
T ss_pred --------CCCCEEEEEc-CCCcEEEEECCCC----CeEEEcCCccceeEEEECCCCCEEEEec-CCCcEEEEECCCCeE
Confidence 23 3444443 3478888888765 2222222234567999999887665444 678899999876544
Q ss_pred EEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 391 EVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 391 ~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
.... ..-..+..+++.+.++.|+.+. ..+.|.+.++
T Consensus 300 ~~~~-~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~~ 335 (337)
T 1gxr_A 300 IFQS-KESSSVLSCDISVDDKYIVTGS-GDKKATVYEV 335 (337)
T ss_dssp EEEE-ECSSCEEEEEECTTSCEEEEEE-TTSCEEEEEE
T ss_pred EEEe-cCCCcEEEEEECCCCCEEEEec-CCCeEEEEEE
Confidence 3332 2446788999988776665554 4667877765
No 128
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.70 E-value=3e-05 Score=74.39 Aligned_cols=245 Identities=12% Similarity=0.107 Sum_probs=146.6
Q ss_pred CceEEEEcCCCCeEEEEEcCCC---CCcEEEEeCCC------CCcee--EE-----ecCccCceEEEEeCCCCEEEEEeC
Q psy14258 173 KPRGIALDPTSGYMFFTKWGAT---RPMLERSLLDG------TERFP--MV-----THKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 173 ~P~~iavd~~~g~lywtd~~~~---~~~I~r~~~dG------~~~~~--l~-----~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
-|.||++|..+|+||.|-..-. ..++-....+. .+... -. ...+..+.++.+| ..++|++.|.
T Consensus 27 ~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~~v~iD-~~~rLWVLDt 105 (381)
T 3q6k_A 27 ISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIYQPVID-DCRRLWVVDI 105 (381)
T ss_dssp CCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEEEEEEC-TTCEEEEEEC
T ss_pred ceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEeeEEEEc-CCCcEEEEeC
Confidence 4667777634677777653210 13444444321 11111 11 1246678899999 6899999997
Q ss_pred CC---------------CcEEEEEccCC--Cc-EEEecC-C---ccCceeeeeEe---------cCEEEEEecCCCeEEE
Q psy14258 237 YL---------------DFIDRINYDGT--DR-KTIRKG-F---PVQNLYDITVF---------ENNLFVTSWRNQSIIR 285 (440)
Q Consensus 237 ~~---------------~~i~~~~~dG~--~~-~~i~~~-~---~~~~p~gl~~~---------~~~ly~td~~~~~i~~ 285 (440)
+. -+|..+|+... .+ +.+.-. . .-.....|+++ +.++|+||.....|..
T Consensus 106 G~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIV 185 (381)
T 3q6k_A 106 GSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFI 185 (381)
T ss_dssp SSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEE
T ss_pred CCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEE
Confidence 62 16777887654 22 222211 1 12345678888 4599999998899999
Q ss_pred EeccCCCceEEEecCCCCe--EEEEecc-C-----------CCCCCCCCceeEEeecCCccEEEEEEc---CCCCCCcee
Q psy14258 286 VNKFNSDDYETIANFSRPF--AIHIYHR-Q-----------KQPDALKPSTFLLYAKGKPAIIKGLTF---KRDGTTEQA 348 (440)
Q Consensus 286 ~~~~~g~~~~~~~~~~~p~--~~~v~~~-~-----------~qp~~~~~~~~l~~~~~~~~~I~~i~~---~~~~~~~~~ 348 (440)
++..+++...+....-.|. +....+. . .-|...+....|||.......+++++. ........+
T Consensus 186 ydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v 265 (381)
T 3q6k_A 186 YDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNP 265 (381)
T ss_dssp EETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCC
T ss_pred EECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhce
Confidence 9998888877664322221 1111110 0 011111124688888765567888873 222111111
Q ss_pred eeeec-C-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCC-----CCeEEEEE-CCCCCeeeEEEecCCCcEEEEeCC
Q psy14258 349 IMPIT-D-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG-----RGKEVVID-TGIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 349 ~~~~~-~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g-----~~~~~~~~-~~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
..... + .....++++|+.+|.||+++...+.|.+.+.++ .+.++++. ..+..|.+|++|. .++||++...
T Consensus 266 ~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~-~g~Lwv~sn~ 343 (381)
T 3q6k_A 266 ELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDS-KGGLWFMSNG 343 (381)
T ss_dssp EEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECT-TSCEEEEECS
T ss_pred EEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECC-CCeEEEEECc
Confidence 11111 1 123457889977899999999999999999987 34456554 5678899999995 5689998643
No 129
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.70 E-value=8.4e-06 Score=75.35 Aligned_cols=227 Identities=10% Similarity=-0.007 Sum_probs=135.9
Q ss_pred CeEEEEEcCCCCCcEEEEeC-CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCc
Q psy14258 184 GYMFFTKWGATRPMLERSLL-DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQN 262 (440)
Q Consensus 184 g~lywtd~~~~~~~I~r~~~-dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~ 262 (440)
+.+++++... .+|...+. +|.....+-......|+.+++++ ++++|++ ..+.|..++.+|..+..+..+. -.+
T Consensus 5 ~~~lv~~~~~--~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilvs--~~~~V~~~d~~G~~~W~~~~~~-~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGW--NKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILFS--YSKGAKMITRDGRELWNIAAPA-GCE 78 (276)
T ss_dssp CEEEEECTTC--SEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEEE--CBSEEEEECTTSCEEEEEECCT-TCE
T ss_pred CcEEEeeCCC--CEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEEe--CCCCEEEECCCCCEEEEEcCCC-Ccc
Confidence 3444444433 35555555 44433333222123578888885 4566664 3567999998887665554321 124
Q ss_pred eeeeeEec-CEEEEEecC-CCeEEEEeccCCCceEEEe-cCCCCeEEEEeccCCCCCCC--CCceeEEeecCCccEEEEE
Q psy14258 263 LYDITVFE-NNLFVTSWR-NQSIIRVNKFNSDDYETIA-NFSRPFAIHIYHRQKQPDAL--KPSTFLLYAKGKPAIIKGL 337 (440)
Q Consensus 263 p~gl~~~~-~~ly~td~~-~~~i~~~~~~~g~~~~~~~-~~~~p~~~~v~~~~~qp~~~--~~~~~l~~~~~~~~~I~~i 337 (440)
+.++++.. +.+++++.. +++|+.+++ +|+....+. .... ..+..+|... .+++-+++++...++|..+
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI------ERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC------SSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC------CcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 45566554 488888877 888988887 566544221 1000 0000111111 2455677777777899999
Q ss_pred EcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC-CCCeEEEEEC-----CCCCeeeEEEecCCC
Q psy14258 338 TFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF-GRGKEVVIDT-----GIYNVEGMAVDWMAN 411 (440)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~-g~~~~~~~~~-----~~~~~~glAvD~~~~ 411 (440)
+.+|. .......-..|.++...+. +.+++++...++|+.++++ |.....+... .+..|.+++++. ++
T Consensus 152 d~~G~-----~~w~~~~~~~~~~~~~~~~-g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~-~G 224 (276)
T 3no2_A 152 APNGQ-----LLNSVKLSGTPFSSAFLDN-GDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ-NG 224 (276)
T ss_dssp CTTSC-----EEEEEECSSCCCEEEECTT-SCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT-TS
T ss_pred CCCCC-----EEEEEECCCCccceeEcCC-CCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC-CC
Confidence 98866 2222222246788888775 4588888888899999998 7655555432 244589999996 77
Q ss_pred cEEEEeC-C---------CCeEEEEEeCC
Q psy14258 412 NLYWTDA-G---------IGTINVAKISD 430 (440)
Q Consensus 412 ~lYwtd~-~---------~~~I~~~~~~g 430 (440)
++|+++. + ..++..++.+|
T Consensus 225 ~i~v~~~~g~~~~~~~~~~~~~~~~~~~g 253 (276)
T 3no2_A 225 GLYICNWQGHDREAGKGKHPQLVEIDSEG 253 (276)
T ss_dssp CEEEEEECTTCTTGGGSCCCSEEEECTTS
T ss_pred CEEEEeccCccccccccCCceEEEECCCC
Confidence 8999984 2 23455556677
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.68 E-value=1.9e-05 Score=72.09 Aligned_cols=246 Identities=11% Similarity=0.030 Sum_probs=150.8
Q ss_pred ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC-CCceeEEecC-ccCceEEEEeCCC
Q psy14258 151 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG-TERFPMVTHK-IVYPYGVTVDFPT 228 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG-~~~~~l~~~~-~~~P~gl~vD~~~ 228 (440)
..|.+.++++...+.+.. ....+.++++.|...+|+++. . ..|...++++ .....+.... ...+..+++.+.+
T Consensus 22 ~~i~~~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~-~---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 96 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQ-TPELFEAPNWSPDGKYLLLNS-E---GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDG 96 (297)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSCCEEEEECTTSSEEEEEE-T---TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTS
T ss_pred eeEEEEeCCCCceeeecc-CCcceEeeEECCCCCEEEEEc-C---CeEEEEeCCCCCCceEeccccccccccceEECCCC
Confidence 467777877766655544 345688999999766677765 2 5899999987 5554443322 2456779999889
Q ss_pred CEEEEEeCC---CCcEEEEEccCCCcEEEecCCccCceeeeeEec--CEEEEEecCCC--eEEEEeccCCCceEEEecCC
Q psy14258 229 KHVYWVDTY---LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQ--SIIRVNKFNSDDYETIANFS 301 (440)
Q Consensus 229 ~~ly~~d~~---~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~--~i~~~~~~~g~~~~~~~~~~ 301 (440)
..|+++... ...|+.++.++.....+... ..+..+++.. ..|+++....+ .|+.++..++....+.....
T Consensus 97 ~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 97 ALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN---LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SEEEEEECTTTSSCEEEEEETTCCCCEECCSS---SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CEEEEEEeCCCCcceEEEEECCCCceEEeecC---CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 999888743 46888888877766555432 2356666653 46776654444 56666665443322222222
Q ss_pred CCeEEEEeccCCCCCCCCCc-eeEEeec--CCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECC-
Q psy14258 302 RPFAIHIYHRQKQPDALKPS-TFLLYAK--GKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELT- 376 (440)
Q Consensus 302 ~p~~~~v~~~~~qp~~~~~~-~~l~~~~--~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~- 376 (440)
.+..+.+. |+ .+|+++. .....|+.+++++. .. ..+.. ......+++++.+++|+++...
T Consensus 174 ~~~~~~~s----------~dg~~l~~~~~~~~~~~i~~~~~~~~----~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 174 RNDGPDYS----------PDGRWIYFNSSRTGQMQIWRVRVDGS----SV-ERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp CEEEEEEC----------TTSSEEEEEECTTSSCEEEEEETTSS----CE-EECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred ccccceEC----------CCCCEEEEEecCCCCccEEEECCCCC----Cc-EEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 33344332 23 4455543 22356666665544 11 11211 1234578899999988887643
Q ss_pred ---------CCeEEEEecCCCCeEEEEE--CCCCCeeeEEEecCCCcEEEEeCC
Q psy14258 377 ---------SYVIERRKMFGRGKEVVID--TGIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 377 ---------~~~I~r~~~~g~~~~~~~~--~~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
...|+..++++.....+.. ..-..+..+++.+.++.|+++...
T Consensus 239 ~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 239 DVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp TCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred CCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 3679999998765544432 233467778888888888887543
No 131
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.67 E-value=0.00054 Score=69.45 Aligned_cols=305 Identities=9% Similarity=0.005 Sum_probs=180.8
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|.+.++.|.-.. ..+.|+..+.++..... +......+.+ ++.+.+..|.-+ +.|.+.+
T Consensus 264 ~v~~v~~~~d~~~l~~~~-~d~~i~~w~~~~~~~~~-----------~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 264 SVNGVAFRPDGQTIASAS-DDKTVKLWNRNGQLLQT-----------LTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEETTSCEEEE-----------ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEe-CCCEEEEEeCCCcEEEE-----------EecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 388999998766665444 34556554443322111 1222334566 777766655444 6788889
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
+++.....+. .....+.++++.|....|...... +.|...+.+|.....+. ..-..+.++++.+.+..|..+. .
T Consensus 332 ~~~~~~~~~~-~~~~~v~~~~~s~~g~~l~~~~~d---g~v~~~~~~~~~~~~~~-~~~~~v~~~~~s~dg~~l~~~~-~ 405 (577)
T 2ymu_A 332 RNGQHLQTLT-GHSSSVWGVAFSPDGQTIASASDD---KTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASAS-D 405 (577)
T ss_dssp TTSCEEEEEC-CCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTCCEEEEEE-CCSSCEEEEEECTTSSCEEEEE-T
T ss_pred CCCCeeEEEe-CCCCCEEEEEECCCCCEEEEEeCC---CEEEEEcCCCCEEEEec-CCCCCeEEEEECCCCCEEEEEe-C
Confidence 9887766553 344668899999965555444433 57888888776544432 2234578899987777776654 4
Q ss_pred CCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCC
Q psy14258 238 LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQP 315 (440)
Q Consensus 238 ~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp 315 (440)
.+.|...+.++.....+... -....++++..+ ....+-..++.|...+. +++....+..-. ....+.+.
T Consensus 406 d~~v~~~~~~~~~~~~~~~~--~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~s------ 476 (577)
T 2ymu_A 406 DKTVKLWNRNGQLLQTLTGH--SSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFS------ 476 (577)
T ss_dssp TSEEEEECTTCCEEEEEECC--SSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEEC------
T ss_pred CCEEEEEeCCCCEEEEecCC--CCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEc------
Confidence 56777777777655554432 234567777654 44444445667766664 454444443322 33444433
Q ss_pred CCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE
Q psy14258 316 DALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI 394 (440)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~ 394 (440)
|++.++++-+..+.|+..+.++. ....+.+ -....+++|.+.+..|.-++ ..+.|+-.+.+|....++
T Consensus 477 ----pd~~~las~~~d~~i~iw~~~~~-----~~~~~~~h~~~v~~l~~s~dg~~l~s~~-~dg~v~lwd~~~~~~~~~- 545 (577)
T 2ymu_A 477 ----PDGQTIASASDDKTVKLWNRNGQ-----LLQTLTGHSSSVRGVAFSPDGQTIASAS-DDKTVKLWNRNGQLLQTL- 545 (577)
T ss_dssp ----TTSCEEEEEETTSEEEEEETTSC-----EEEEEECCSSCEEEEEECTTSSCEEEEE-TTSEEEEECTTSCEEEEE-
T ss_pred ----CCCCEEEEEeCCCEEEEEcCCCC-----EEEEEeCCCCCEEEEEEcCCCCEEEEEE-CcCEEEEEeCCCCEEEEE-
Confidence 34334444344478888886654 2222222 33567999999877665444 678888888877544443
Q ss_pred ECCCCCeeeEEEecCCCcEEEEeCCCCeEEE
Q psy14258 395 DTGIYNVEGMAVDWMANNLYWTDAGIGTINV 425 (440)
Q Consensus 395 ~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~ 425 (440)
...-..+.+|++.+.++.|.-+. ..++|.+
T Consensus 546 ~~h~~~v~~~~fs~dg~~l~s~~-~D~~i~~ 575 (577)
T 2ymu_A 546 TGHSSSVWGVAFSPDGQTIASAS-SDKTVKL 575 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEE-TTSCEEE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEe-CCCEEEE
Confidence 33456788999988777665433 3344543
No 132
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.66 E-value=0.00022 Score=66.53 Aligned_cols=273 Identities=6% Similarity=-0.055 Sum_probs=157.3
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEec
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTH 158 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~ 158 (440)
+.++++++.++.|+.+. .+.|...++........ .........-..+.. ++.+.++.|+.+ +.|.+.++
T Consensus 54 v~~~~~~~~~~~l~~~~--dg~i~iw~~~~~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 126 (337)
T 1gxr_A 54 VCAVTISNPTRHVYTGG--KGCVKVWDISHPGNKSP-----VSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDL 126 (337)
T ss_dssp CCEEEECSSSSEEEEEC--BSEEEEEETTSTTCCSC-----SEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEEC
T ss_pred eEEEEEecCCcEEEEcC--CCeEEEEECCCCCceee-----eecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEEC
Confidence 78888988877766665 46676666543221110 000000022334556 777666656655 68999888
Q ss_pred CCceE--EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeC
Q psy14258 159 YMEHC--MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 159 dg~~~--~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
+.... .............+++.|....|+..... +.|...++........+...-..+..+++++.+..|+.+.
T Consensus 127 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~- 202 (337)
T 1gxr_A 127 AAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD---GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGG- 202 (337)
T ss_dssp CCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-
T ss_pred CCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC---CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEe-
Confidence 87652 22333344567899999965566665544 5788888875543333333345678899987777777665
Q ss_pred CCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCC
Q psy14258 237 YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQ 314 (440)
Q Consensus 237 ~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~q 314 (440)
..+.|...++........... ...+..+++..+ .|+.. ...+.|...+..+++..........+..+.+.
T Consensus 203 ~dg~i~~~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~----- 274 (337)
T 1gxr_A 203 LDNTVRSWDLREGRQLQQHDF--TSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKPDKYQLHLHESCVLSLKFA----- 274 (337)
T ss_dssp TTSEEEEEETTTTEEEEEEEC--SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSSCEEEECCCSSCEEEEEEC-----
T ss_pred cCCcEEEEECCCCceEeeecC--CCceEEEEECCCCCEEEEE-cCCCcEEEEECCCCCeEEEcCCccceeEEEEC-----
Confidence 567888888765443333322 234567777543 45444 45677887787655433222222233444443
Q ss_pred CCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEe
Q psy14258 315 PDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRK 384 (440)
Q Consensus 315 p~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~ 384 (440)
|++.++++-+..+.|+..++... ........-..+.++++.+.++.++.+. ..+.|...+
T Consensus 275 -----~~~~~l~~~~~dg~i~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~iw~ 334 (337)
T 1gxr_A 275 -----YCGKWFVSTGKDNLLNAWRTPYG----ASIFQSKESSSVLSCDISVDDKYIVTGS-GDKKATVYE 334 (337)
T ss_dssp -----TTSSEEEEEETTSEEEEEETTTC----CEEEEEECSSCEEEEEECTTSCEEEEEE-TTSCEEEEE
T ss_pred -----CCCCEEEEecCCCcEEEEECCCC----eEEEEecCCCcEEEEEECCCCCEEEEec-CCCeEEEEE
Confidence 23223333334578888887665 2222333344677899999887776555 456665443
No 133
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.66 E-value=1.8e-05 Score=77.15 Aligned_cols=196 Identities=11% Similarity=0.012 Sum_probs=120.3
Q ss_pred ecccEEEEEEcCCCCceeEEeCCCC--Ccceeeccccc-cceeeccccccce-eeeecCCcEEEe----------ceEEE
Q psy14258 90 YMEHCMIAIDLNLSKPRGIALDPTS--GYMFFTKWGAT-RPMLERSLLDGTE-RFPMVTHKIVYP----------EAIYF 155 (440)
Q Consensus 90 ~~~~~ly~~d~~~~~I~~~~~~~~~--~~~~~~~~~~~-~v~~~~~~~~p~~-avD~~~~~lY~~----------~~I~~ 155 (440)
..+++||.+...+++|+.++..... .... +..++ ++.-..+...|.+ +.-+.+ ||++ +.|.+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~--k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~v 168 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKII--KVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILM 168 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEE--EEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceee--eeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEE
Confidence 6688999999999999988764221 1111 00000 0000124557888 777665 9998 25888
Q ss_pred EecCCceEEEEEcCC---CCCceEEEEcCCCCeEEEEEcC----------------CCCCcEEEEeCCCCCceeEEec--
Q psy14258 156 CTHYMEHCMIAIDLN---LSKPRGIALDPTSGYMFFTKWG----------------ATRPMLERSLLDGTERFPMVTH-- 214 (440)
Q Consensus 156 ~~~dg~~~~~~~~~~---~~~P~~iavd~~~g~lywtd~~----------------~~~~~I~r~~~dG~~~~~l~~~-- 214 (440)
.+.++.....-...+ ...+.++.+.|....||.++|+ ....+|...+++......-+..
T Consensus 169 lD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~ 248 (462)
T 2ece_A 169 LDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE 248 (462)
T ss_dssp ECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT
T ss_pred EECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC
Confidence 887754433222211 1235557778988899999875 0115899999985321111221
Q ss_pred CccCceEEEE--eCCCCEEEEEeC-----CCCcEEEEEccCCCcE---EEecCC-----c-----------cCceeeeeE
Q psy14258 215 KIVYPYGVTV--DFPTKHVYWVDT-----YLDFIDRINYDGTDRK---TIRKGF-----P-----------VQNLYDITV 268 (440)
Q Consensus 215 ~~~~P~gl~v--D~~~~~ly~~d~-----~~~~i~~~~~dG~~~~---~i~~~~-----~-----------~~~p~gl~~ 268 (440)
.-..|..|.+ ++.+..+|++.. ..+.|..+.+++...+ ++.... . -..|.+|.+
T Consensus 249 ~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 249 ENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp TEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 1235888877 989999999988 8888988777653221 110000 0 134667776
Q ss_pred ecC--EEEEEecCCCeEEEEecc
Q psy14258 269 FEN--NLFVTSWRNQSIIRVNKF 289 (440)
Q Consensus 269 ~~~--~ly~td~~~~~i~~~~~~ 289 (440)
..| +||+++|..+.|..++..
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECS
T ss_pred CCCCCEEEEEeCCCCEEEEEEec
Confidence 544 899999888888776653
No 134
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.64 E-value=8.7e-06 Score=76.86 Aligned_cols=191 Identities=12% Similarity=0.163 Sum_probs=120.9
Q ss_pred CCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC---------EEEEEecC--CCeEEEE--eccCCCc
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN---------NLFVTSWR--NQSIIRV--NKFNSDD 293 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~---------~ly~td~~--~~~i~~~--~~~~g~~ 293 (440)
...+ +++-.+.+.+..++++|..+..+.. ..++++.+..+ .+|.++.. +++|..+ +..++.
T Consensus 39 ~~s~-ii~t~k~~gL~Vydl~G~~l~~~~~----g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~- 112 (355)
T 3amr_A 39 QNSK-LITTNKKSGLVVYSLDGKMLHSYNT----GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT- 112 (355)
T ss_dssp GGCE-EEEEETTTEEEEEETTSCEEEEECC----SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-
T ss_pred CccE-EEEEcCCCCEEEEcCCCcEEEEccC----CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-
Confidence 3344 4433345677888888877766532 24555554332 46899988 7877555 554443
Q ss_pred eEEE--------ecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcC--CCC-CCceeeeeecCCCCceEEE
Q psy14258 294 YETI--------ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFK--RDG-TTEQAIMPITDLKRPSVID 362 (440)
Q Consensus 294 ~~~~--------~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~--~~~-~~~~~~~~~~~~~~p~~l~ 362 (440)
...+ ..+..|+|+.+|+.... .+.|+|+.+.. +.+..+.+. +.+ ........+.--..|.+++
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~-----g~~yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Egcv 186 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKT-----GKYYAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMNSQTEGMA 186 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTT-----CCEEEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEE
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCC-----CcEEEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCCCCcceEE
Confidence 3323 22357899999863221 12467777664 777775553 221 1122223333335799999
Q ss_pred EEcCCCEEEEEECCCCeEEEEecC--CCC-eEEEEEC---CCC-CeeeEEEecCC---CcEEEEeCCCCeEEEEEeCC
Q psy14258 363 YHEKEEYIYYAELTSYVIERRKMF--GRG-KEVVIDT---GIY-NVEGMAVDWMA---NNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 363 ~d~~~~~vy~~d~~~~~I~r~~~~--g~~-~~~~~~~---~~~-~~~glAvD~~~---~~lYwtd~~~~~I~~~~~~g 430 (440)
+|+..++||+++...+ |++++.+ ++. .+.+... ++. .++|||+.... +.|+.++.+.++..+++..+
T Consensus 187 vDd~~g~Lyv~eEd~G-Iw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~ 263 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEA-IWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG 263 (355)
T ss_dssp EETTTTEEEEEETTTE-EEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST
T ss_pred EcCCCCeEEEecccce-EEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC
Confidence 9999999999998755 9999955 322 3444332 232 79999996433 47999999999999999975
No 135
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.64 E-value=5e-05 Score=74.42 Aligned_cols=222 Identities=8% Similarity=0.003 Sum_probs=142.9
Q ss_pred CcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCC--CcEEEEEccCCCcEEEecCCccCceeeeeEec--C
Q psy14258 196 PMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL--DFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--N 271 (440)
Q Consensus 196 ~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~--~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~ 271 (440)
..|...+++|...+.+... -.....+++.+.+.+|+++.... ..|...++.+.....+... -.....+++.. .
T Consensus 159 ~~i~i~d~~g~~~~~l~~~-~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~--~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS-PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF--PRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE-SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC--SSCEEEEEECTTSS
T ss_pred ceEEEEcCCCCCCEEEeCC-CCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC--CCcccCEEEcCCCC
Confidence 4899999999877666543 34567899999999999887543 5899999877666555432 23456777764 3
Q ss_pred EEEEEecC--CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCC--ccEEEEEEcCCCCCCc
Q psy14258 272 NLFVTSWR--NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGK--PAIIKGLTFKRDGTTE 346 (440)
Q Consensus 272 ~ly~td~~--~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~--~~~I~~i~~~~~~~~~ 346 (440)
.|+++... ...|+..+..+++...+.........+... |+ .+|+++... ...|+.+++++. ..
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~s----------pdg~~l~~~s~~~g~~~i~~~d~~~~-~~- 303 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF----------PDSQNLAFTSDQAGRPQVYKVNINGG-AP- 303 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEEC----------TTSSEEEEEECTTSSCEEEEEETTSS-CC-
T ss_pred EEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEEC----------CCCCEEEEEECCCCCcEEEEEECCCC-CE-
Confidence 68876543 345888887666543222111122233222 33 445555432 237888888765 11
Q ss_pred eeeeeecCCCCceEEEEEcCCCEEEEEECC--CCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCC--e
Q psy14258 347 QAIMPITDLKRPSVIDYHEKEEYIYYAELT--SYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIG--T 422 (440)
Q Consensus 347 ~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~--~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~--~ 422 (440)
............+++.+.+++|+++... ...|+..++++.....+.. . ..+..+++.+.++.|+++....+ .
T Consensus 304 --~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~-~-~~~~~~~~spdg~~l~~~s~~~~~~~ 379 (415)
T 2hqs_A 304 --QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSS-T-FLDETPSLAPNGTMVIYSSSQGMGSV 379 (415)
T ss_dssp --EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCC-S-SSCEEEEECTTSSEEEEEEEETTEEE
T ss_pred --EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecC-C-CCcCCeEEcCCCCEEEEEEcCCCccE
Confidence 1111122345578999999999988754 4689999998765544332 3 37889999998988888865444 7
Q ss_pred EEEEEeCCCeeeEEe
Q psy14258 423 INVAKISDFSIRKVL 437 (440)
Q Consensus 423 I~~~~~~g~~~~~~l 437 (440)
|.+.+++| ...+.|
T Consensus 380 l~~~d~~g-~~~~~l 393 (415)
T 2hqs_A 380 LNLVSTDG-RFKARL 393 (415)
T ss_dssp EEEEETTS-CCEEEC
T ss_pred EEEEECCC-CcEEEe
Confidence 99999998 434433
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.61 E-value=7.1e-05 Score=73.33 Aligned_cols=238 Identities=11% Similarity=-0.003 Sum_probs=150.9
Q ss_pred eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEE
Q psy14258 152 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHV 231 (440)
Q Consensus 152 ~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~l 231 (440)
.|.+.+++|...+.+.. ......++++.|...+|+++........|...++++.....+.. .-.....+++.+.+.+|
T Consensus 160 ~i~i~d~~g~~~~~l~~-~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~-~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 160 ELRVSDYDGYNQFVVHR-SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVAS-FPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEETTSCSCEEEEE-ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEEC-CSSCEEEEEECTTSSEE
T ss_pred eEEEEcCCCCCCEEEeC-CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeec-CCCcccCEEEcCCCCEE
Confidence 68888999877766654 33568899999977778888765322589999998766554432 23456789999888889
Q ss_pred EEEeCCC--CcEEEEEccCCCcEEEecCCccCceeeeeEec--CEEEEEecCC--CeEEEEeccCCCceEEEecCCCCeE
Q psy14258 232 YWVDTYL--DFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRN--QSIIRVNKFNSDDYETIANFSRPFA 305 (440)
Q Consensus 232 y~~d~~~--~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~--~~i~~~~~~~g~~~~~~~~~~~p~~ 305 (440)
+++.... ..|+..++.+.....+... -.....+++.. ..|+++.... ..|+.++..+++...+.........
T Consensus 238 a~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~ 315 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASGQIRQVTDG--RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQD 315 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEEECCCC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEE
T ss_pred EEEEecCCCceEEEEECCCCCEEeCcCC--CCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccC
Confidence 9776443 4699999877665544332 22345666653 4677765433 3788888876654332221111222
Q ss_pred EEEeccCCCCCCCCCc-eeEEeecCC--ccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCC--eE
Q psy14258 306 IHIYHRQKQPDALKPS-TFLLYAKGK--PAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSY--VI 380 (440)
Q Consensus 306 ~~v~~~~~qp~~~~~~-~~l~~~~~~--~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~--~I 380 (440)
+.+. |+ .+|+++... ...|+.+++++. .. ..+........+++.+.++.|+++....+ .|
T Consensus 316 ~~~s----------pdG~~l~~~~~~~g~~~i~~~d~~~~----~~-~~l~~~~~~~~~~~spdg~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 316 ADVS----------SDGKFMVMVSSNGGQQHIAKQDLATG----GV-QVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVL 380 (415)
T ss_dssp EEEC----------TTSSEEEEEEECSSCEEEEEEETTTC----CE-EECCCSSSCEEEEECTTSSEEEEEEEETTEEEE
T ss_pred eEEC----------CCCCEEEEEECcCCceEEEEEECCCC----CE-EEecCCCCcCCeEEcCCCCEEEEEEcCCCccEE
Confidence 3222 23 456665432 357888888765 11 22222235778999999999988865444 89
Q ss_pred EEEecCCCCeEEEEECCCCCeeeEEEecC
Q psy14258 381 ERRKMFGRGKEVVIDTGIYNVEGMAVDWM 409 (440)
Q Consensus 381 ~r~~~~g~~~~~~~~~~~~~~~glAvD~~ 409 (440)
+..+++|...+.+.. .-+.+..+|..+.
T Consensus 381 ~~~d~~g~~~~~l~~-~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 381 NLVSTDGRFKARLPA-TDGQVKFPAWSPY 408 (415)
T ss_dssp EEEETTSCCEEECCC-SSSEEEEEEECCC
T ss_pred EEEECCCCcEEEeeC-CCCCCcCCccccc
Confidence 999999866555432 3345555665443
No 137
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.61 E-value=0.00017 Score=69.51 Aligned_cols=318 Identities=6% Similarity=-0.101 Sum_probs=181.1
Q ss_pred EEEEEeeeccc-EEEEEEcCCCCceeEEe----CCCCC-cceeeccccccceeec----------cccccce-eeeecCC
Q psy14258 83 AIYFCTHYMEH-CMIAIDLNLSKPRGIAL----DPTSG-YMFFTKWGATRPMLER----------SLLDGTE-RFPMVTH 145 (440)
Q Consensus 83 ~~~i~~d~~~~-~ly~~d~~~~~I~~~~~----~~~~~-~~~~~~~~~~~v~~~~----------~~~~p~~-avD~~~~ 145 (440)
+.++++++.++ .|..... .+.|...++ ..... -.+ . ....+.. .-..+.. ++.+.++
T Consensus 48 v~~~~~s~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEK-NSVARLARIVETDQEGKKYWKL---T--IIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp CSEEEECSSCTTEEEEEET-BTEEEEEEEEEC------CEEE---E--EEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eEEEEECCCCCcEEEEecC-CceEEEEEEecccCCccccccc---c--ccccccccccccccccCCCCceEEEEEcCCCC
Confidence 88889998877 5555544 466666655 32220 000 0 0000111 1224555 6666565
Q ss_pred cEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccC----
Q psy14258 146 KIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVY---- 218 (440)
Q Consensus 146 ~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~---- 218 (440)
.|+.+ +.|.+.+.++.....+ ........++++.|...+|+.+... +.|...++........+......
T Consensus 122 ~l~~~~~dg~i~i~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKTGALLNVL-NFHRAPIVSVKWNKDGTHIISMDVE---NVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEE-CCCCSCEEEEEECTTSSEEEEEETT---CCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEEeCCCeEEEEeCCCCeeeec-cCCCccEEEEEECCCCCEEEEEecC---CeEEEEECCCCcEEEEeeccccCccce
Confidence 55554 6788888777766555 3345678999999966666666544 57888888544332222211111
Q ss_pred -----------ceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEE
Q psy14258 219 -----------PYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRV 286 (440)
Q Consensus 219 -----------P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~ 286 (440)
...+++.+ .+.++ +-...+.|...++........... .......+++..+ .++++-...+.|...
T Consensus 198 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~g~i~~~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~ 274 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVD-DDKFV-IPGPKGAIFVYQITEKTPTGKLIG-HHGPISVLEFNDTNKLLLSASDDGTLRIW 274 (425)
T ss_dssp --------CCCBSCCEEEE-TTEEE-EECGGGCEEEEETTCSSCSEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eeccccCCcceeeEEEEcC-CCEEE-EEcCCCeEEEEEcCCCceeeeecc-CCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 45666663 34444 444567888888765443322222 1234567777644 344444457788888
Q ss_pred eccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEE
Q psy14258 287 NKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYH 364 (440)
Q Consensus 287 ~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d 364 (440)
+..+++....+.... ....+.+. |++ ++++-+..+.|+.+++... .....+.. -..+..+++.
T Consensus 275 d~~~~~~~~~~~~~~~~i~~~~~~----------~~~-~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~i~~~~~s 339 (425)
T 1r5m_A 275 HGGNGNSQNCFYGHSQSIVSASWV----------GDD-KVISCSMDGSVRLWSLKQN----TLLALSIVDGVPIFAGRIS 339 (425)
T ss_dssp CSSSBSCSEEECCCSSCEEEEEEE----------TTT-EEEEEETTSEEEEEETTTT----EEEEEEECTTCCEEEEEEC
T ss_pred ECCCCccceEecCCCccEEEEEEC----------CCC-EEEEEeCCCcEEEEECCCC----cEeEecccCCccEEEEEEc
Confidence 877666665554322 33444443 344 4444344578888888655 22222222 3356789999
Q ss_pred cCCCEEEEEECCCCeEEEEecCCCC--------------------eEEEEECCCC--CeeeEEEecCCCcEEEEeCCCCe
Q psy14258 365 EKEEYIYYAELTSYVIERRKMFGRG--------------------KEVVIDTGIY--NVEGMAVDWMANNLYWTDAGIGT 422 (440)
Q Consensus 365 ~~~~~vy~~d~~~~~I~r~~~~g~~--------------------~~~~~~~~~~--~~~glAvD~~~~~lYwtd~~~~~ 422 (440)
+.++.|+.+. ..+.|...++.... ....+..... .+..+++.+.++.|+.+. ..+.
T Consensus 340 ~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~ 417 (425)
T 1r5m_A 340 QDGQKYAVAF-MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAY-SLQE 417 (425)
T ss_dssp TTSSEEEEEE-TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEE-SSSC
T ss_pred CCCCEEEEEE-CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEe-cCce
Confidence 9888666554 57788888876433 2222222222 788999998777666554 4678
Q ss_pred EEEEEeCC
Q psy14258 423 INVAKISD 430 (440)
Q Consensus 423 I~~~~~~g 430 (440)
|.+.+++|
T Consensus 418 i~iw~~~g 425 (425)
T 1r5m_A 418 GSVVAIPG 425 (425)
T ss_dssp CEEEECCC
T ss_pred EEEEeecC
Confidence 99988876
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.53 E-value=0.00025 Score=77.91 Aligned_cols=348 Identities=6% Similarity=-0.063 Sum_probs=191.4
Q ss_pred eEEEEeecccceeeeEEEecCCCcee-eeeecccceEEEEEeeecccEEEEEEcC-----CCCceeEEeCCCCCcceeec
Q psy14258 48 THLYETIEAFWEECFGPMDIEEWDEG-LSFLTFAQEAIYFCTHYMEHCMIAIDLN-----LSKPRGIALDPTSGYMFFTK 121 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~~~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~-----~~~I~~~~~~~~~~~~~~~~ 121 (440)
.|.|+.... |+..++.+.... +.-... .+..+++.+.+++|.|+... ...|+...+.+.....+
T Consensus 26 ~iaf~~~~~-----l~~~~~~gg~~~~lt~~~~--~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~~l--- 95 (1045)
T 1k32_A 26 RIIFVCCDD-----LWEHDLKSGSTRKIVSNLG--VINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRI--- 95 (1045)
T ss_dssp EEEEEETTE-----EEEEETTTCCEEEEECSSS--EEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEEEC---
T ss_pred EEEEEECCc-----EEEEECCCCcEEEeeeCCC--cccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeEEc---
Confidence 566766677 888999876554 332222 38899999999999888543 23577666655432221
Q ss_pred cccccceeeccccccce-eeeecCCcEEEe-c---------eEEEEecCCceEEEEEcCC--------------------
Q psy14258 122 WGATRPMLERSLLDGTE-RFPMVTHKIVYP-E---------AIYFCTHYMEHCMIAIDLN-------------------- 170 (440)
Q Consensus 122 ~~~~~v~~~~~~~~p~~-avD~~~~~lY~~-~---------~I~~~~~dg~~~~~~~~~~-------------------- 170 (440)
+.... ..........+ ++.+.++ ++++ . +|.+.++++...+.+....
T Consensus 96 t~~~~-~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~ 173 (1045)
T 1k32_A 96 TYFSG-KSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFEL 173 (1045)
T ss_dssp CCCCE-EEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCC
T ss_pred ccCCC-cccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCc
Confidence 00000 00000111255 7777776 5555 1 3777777765544332210
Q ss_pred -----------------------------CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceE
Q psy14258 171 -----------------------------LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYG 221 (440)
Q Consensus 171 -----------------------------~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~g 221 (440)
......++..+ ..+|++.......+|+..+.+|...+.+.... ....
T Consensus 174 ~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~--d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~--~~~~ 249 (1045)
T 1k32_A 174 PHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVG--HRIYFITDIDGFGQIYSTDLDGKDLRKHTSFT--DYYP 249 (1045)
T ss_dssp TTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEET--TEEEEEECTTSSCEEEEEETTSCSCEECCCCC--SSCE
T ss_pred cccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeC--CEEEEEEeccCceEEEEEeCCCCcceEecCCC--Ccce
Confidence 01112223333 24555432221257888888776655443322 2234
Q ss_pred EEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCC---------ccCceeeeeEe-cC--EEEEEecCCCeEEEEecc
Q psy14258 222 VTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGF---------PVQNLYDITVF-EN--NLFVTSWRNQSIIRVNKF 289 (440)
Q Consensus 222 l~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~---------~~~~p~gl~~~-~~--~ly~td~~~~~i~~~~~~ 289 (440)
+++.+.+.+|.++. .+.|...+..+.....+.... ....+.++++. .+ .|.+.. .+.|+.++..
T Consensus 250 ~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~~~~ 325 (1045)
T 1k32_A 250 RHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQDVS 325 (1045)
T ss_dssp EEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEECTT
T ss_pred eeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEEcCC
Confidence 56776777777763 467877777544333221110 01134566666 43 565554 5667777765
Q ss_pred CCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEE-EEEcCCCCCCceeeeeecCCCCceEEEEEcCCC
Q psy14258 290 NSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIK-GLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEE 368 (440)
Q Consensus 290 ~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~-~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~ 368 (440)
++.... +.. .+. ..+.+.. -. ....|+++.. ...++ .+++++. .. ..+. .....+..+++.+.++
T Consensus 326 ~~~~~~-~~~--~~~-~~~~~~~----~s-dg~~l~~~s~-~~~l~~~~d~~~~-~~--~~l~-~~~~~~~~~~~SpDG~ 391 (1045)
T 1k32_A 326 GTYVLK-VPE--PLR-IRYVRRG----GD-TKVAFIHGTR-EGDFLGIYDYRTG-KA--EKFE-ENLGNVFAMGVDRNGK 391 (1045)
T ss_dssp SSBEEE-CSC--CSC-EEEEEEC----SS-SEEEEEEEET-TEEEEEEEETTTC-CE--EECC-CCCCSEEEEEECTTSS
T ss_pred CCceEE-ccC--CCc-ceEEeee----Ec-CCCeEEEEEC-CCceEEEEECCCC-Cc--eEec-CCccceeeeEECCCCC
Confidence 544322 111 111 0111100 01 1233444433 36777 7777655 11 1122 2234577899999999
Q ss_pred EEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCC---------CCeEEEEEeCC
Q psy14258 369 YIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAG---------IGTINVAKISD 430 (440)
Q Consensus 369 ~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~---------~~~I~~~~~~g 430 (440)
.|+++. ..+.|+..++.+.....+.......+..+++.+.++.|.++... .+.|.+.++++
T Consensus 392 ~la~~~-~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 392 FAVVAN-DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEEEEE-TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred EEEEEC-CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 888776 45799999998765555554444556889999999988887542 25899999887
No 139
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.50 E-value=0.00083 Score=71.17 Aligned_cols=275 Identities=9% Similarity=0.006 Sum_probs=157.1
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.++++++.+..|..+.. .+.|...++.... .+ ..+...-..+.. ++.+.++.|..+ +.|.+.+
T Consensus 15 ~v~~i~~sp~~~~la~~~~-~g~v~iwd~~~~~--~~--------~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~ 83 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY-SGRVEIWNYETQV--EV--------RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (814)
T ss_dssp CEEEEEECSSSSEEEEEET-TSEEEEEETTTTE--EE--------EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeC-CCEEEEEECCCCc--eE--------EEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 3899999998887777664 3566555543221 11 012222334566 787777766666 7899999
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCC-CceeEEecCccCceEEEEeCCCCEEEEEeC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT-ERFPMVTHKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~-~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
++.......+.........+++.|...+|..+... +.|...+++.. .....+...-.....+++.+.++.++.+-.
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC---CEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 87655444444455678999999976667665544 57888888765 222333333445778899874555555555
Q ss_pred CCCcEEEEEccCCCc-EEEecCCccCceeeeeEe---cCEEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEecc
Q psy14258 237 YLDFIDRINYDGTDR-KTIRKGFPVQNLYDITVF---ENNLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHR 311 (440)
Q Consensus 237 ~~~~i~~~~~dG~~~-~~i~~~~~~~~p~gl~~~---~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~ 311 (440)
..+.|...++..... ..+... .......+++. .+.++++-...+.|...+..+++....+.... ....+.+.
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~-- 237 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH-- 237 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECC-CTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEEC--
T ss_pred CCCeEEEEECCCCcceeEEecC-CCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc--
Confidence 677888888765443 333322 12344556664 33455555567788888876666555544322 23333332
Q ss_pred CCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee-cCCCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 312 QKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI-TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 312 ~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
|++-++++-+..+.|+..++... .....+ .....+.++++.+.+..++++....+.+...++
T Consensus 238 --------~~~~~l~~~~~dg~v~vwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 238 --------PTLPIIISGSEDGTLKIWNSSTY----KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp --------SSSSEEEEEETTSCEEEEETTTC----SEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred --------CCCCEEEEEeCCCeEEEEECCCC----cEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 23223333333477888877654 111111 122345577777766654444434444444443
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.48 E-value=0.00026 Score=74.05 Aligned_cols=276 Identities=7% Similarity=-0.022 Sum_probs=167.7
Q ss_pred cccce-eeeecCCcEEEe--ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC-----
Q psy14258 134 LDGTE-RFPMVTHKIVYP--EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG----- 205 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG----- 205 (440)
..+.. ++.+. +.+.++ +.|.+.++++.....+.. .-..+..+++.|...+|.++.. ..|...++++
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~-~~~~~~~~~~SpdG~~la~~~~----~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFD-TNEETASLDFSPVGDRVAYVRN----HNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEEC-CTTCCTTCEECTTSSEEEEEET----TEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccC-CcccccCCcCCCCCCEEEEEEC----CeEEEEecCcccccC
Confidence 34667 88877 666666 889999998876665544 3345778899997667877642 4899999876
Q ss_pred CCceeEEecCc--------------cCceEEEEeCCCCEEEEEeC--------------------------------CCC
Q psy14258 206 TERFPMVTHKI--------------VYPYGVTVDFPTKHVYWVDT--------------------------------YLD 239 (440)
Q Consensus 206 ~~~~~l~~~~~--------------~~P~gl~vD~~~~~ly~~d~--------------------------------~~~ 239 (440)
.....+..... ..+.++++.+.+.+|+++.. ...
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 44333322211 12578999999999988751 234
Q ss_pred cEEEEEccCCCcEEEecC-CccCceeeeeEec--CEEEEEecCC----CeEEEEeccCCCceE-EEecCC-C----CeEE
Q psy14258 240 FIDRINYDGTDRKTIRKG-FPVQNLYDITVFE--NNLFVTSWRN----QSIIRVNKFNSDDYE-TIANFS-R----PFAI 306 (440)
Q Consensus 240 ~i~~~~~dG~~~~~i~~~-~~~~~p~gl~~~~--~~ly~td~~~----~~i~~~~~~~g~~~~-~~~~~~-~----p~~~ 306 (440)
.|...++++.....+... ..-..+..+++.. ..|+++.... ..|+.++..+|+... +..... . ...+
T Consensus 236 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~ 315 (706)
T 2z3z_A 236 TVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPL 315 (706)
T ss_dssp EEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCC
T ss_pred EEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCc
Confidence 677888776654444322 1123355677654 3677754322 378888887773333 322111 0 0111
Q ss_pred EEeccCCCCCCCCC--c-eeEEeecCC-ccEEEEEEcCCCCCCceeeeeecCCCC-ceE-EEEEcCCCEEEEEECCCC--
Q psy14258 307 HIYHRQKQPDALKP--S-TFLLYAKGK-PAIIKGLTFKRDGTTEQAIMPITDLKR-PSV-IDYHEKEEYIYYAELTSY-- 378 (440)
Q Consensus 307 ~v~~~~~qp~~~~~--~-~~l~~~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~~~-p~~-l~~d~~~~~vy~~d~~~~-- 378 (440)
.+ .| + .+|+.+... ...|+.++.++. . ...+..... ... +++++.++.||++....+
T Consensus 316 ~~----------sp~~dg~~l~~~~~~g~~~l~~~~~~~~----~-~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~ 380 (706)
T 2z3z_A 316 TF----------LPGSNNQFIWQSRRDGWNHLYLYDTTGR----L-IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380 (706)
T ss_dssp EE----------CTTCSSEEEEEECTTSSCEEEEEETTSC----E-EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTT
T ss_pred ee----------ecCCCCEEEEEEccCCccEEEEEECCCC----E-EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCc
Confidence 11 13 3 355544332 246666665444 1 222222222 234 789999999999976654
Q ss_pred --eEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCC---CCeEEEEEeCCCe
Q psy14258 379 --VIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAG---IGTINVAKISDFS 432 (440)
Q Consensus 379 --~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~---~~~I~~~~~~g~~ 432 (440)
.|++.++++...+.+. ....+..+++.+.++.|..+... -..|.+.++++.+
T Consensus 381 ~~~l~~~d~~~~~~~~l~--~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 381 ERHFYCIDIKGGKTKDLT--PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp CBEEEEEETTCCCCEESC--CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred eEEEEEEEcCCCCceecc--CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 8999999875544443 23457788998888877766332 2569999988733
No 141
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.47 E-value=7.2e-05 Score=71.84 Aligned_cols=276 Identities=10% Similarity=-0.013 Sum_probs=155.6
Q ss_pred eeeecCCcEEEe------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE
Q psy14258 139 RFPMVTHKIVYP------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV 212 (440)
Q Consensus 139 avD~~~~~lY~~------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~ 212 (440)
++.+.++.|+++ ..|.+.++++...+.+.........+.++.|...+|+++... ..|.+.++++...+.+.
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~~g~~~~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG---RNLMRVDLATLEENVVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT---TEEEEEETTTCCEEEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC---CeEEEEECCCCcceeee
Confidence 456667767776 258999999877766654332223367899987889998865 48999999987766555
Q ss_pred ecCccCc--eEEEEeCCCCEEEEEe---------------------CCCCcEEEEEccCCCcEEEecCCccCceeeeeEe
Q psy14258 213 THKIVYP--YGVTVDFPTKHVYWVD---------------------TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF 269 (440)
Q Consensus 213 ~~~~~~P--~gl~vD~~~~~ly~~d---------------------~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~ 269 (440)
.....+. ....+++.+..|.... .....|..+++.+...+.+... -.....+++.
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~--~~~~~~~~~s 196 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE--NQWLGHPIYR 196 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE--SSCEEEEEEE
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC--CccccccEEC
Confidence 4332221 1233465555554321 1235788888877776666543 1234555554
Q ss_pred c---CEEEEEecC-----CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeE-EeecCCc---cEEEE
Q psy14258 270 E---NNLFVTSWR-----NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFL-LYAKGKP---AIIKG 336 (440)
Q Consensus 270 ~---~~ly~td~~-----~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l-~~~~~~~---~~I~~ 336 (440)
. ..|.++... ...|+.++..++.... +....... .+.++.-. |+ ..| +.+.... ..|+.
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~--~~~~~~~s-----pdg~~l~~~~~~~~~~~~~l~~ 268 (388)
T 3pe7_A 197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGE--SCTHEFWV-----PDGSALVYVSYLKGSPDRFIYS 268 (388)
T ss_dssp TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTE--EEEEEEEC-----TTSSCEEEEEEETTCCCEEEEE
T ss_pred CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCc--ccccceEC-----CCCCEEEEEecCCCCCcceEEE
Confidence 4 356554432 3478888875443332 22211111 11111122 23 234 3333211 24888
Q ss_pred EEcCCCCCCceeeeeecCC----CCceEEEEEcCCCEEEEEE--------CCCCeEEEEecCCCCeEEEEECCCC-----
Q psy14258 337 LTFKRDGTTEQAIMPITDL----KRPSVIDYHEKEEYIYYAE--------LTSYVIERRKMFGRGKEVVIDTGIY----- 399 (440)
Q Consensus 337 i~~~~~~~~~~~~~~~~~~----~~p~~l~~d~~~~~vy~~d--------~~~~~I~r~~~~g~~~~~~~~~~~~----- 399 (440)
+++++. ... ......+. ..+.++++.++++.|+++- .....|++.++++...+.+.... .
T Consensus 269 ~d~~~g-~~~-~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~-~~~~~~ 345 (388)
T 3pe7_A 269 ADPETL-ENR-QLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHD-TSWKVF 345 (388)
T ss_dssp ECTTTC-CEE-EEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECC-CCCCCB
T ss_pred EecCCC-ceE-EEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEecccc-Cccccc
Confidence 887765 211 11111110 1244457888888888753 45678999999986655555422 2
Q ss_pred ------CeeeEEEecCCCcEEEEeC--CCCeEEEEEeCC
Q psy14258 400 ------NVEGMAVDWMANNLYWTDA--GIGTINVAKISD 430 (440)
Q Consensus 400 ------~~~glAvD~~~~~lYwtd~--~~~~I~~~~~~g 430 (440)
.+..+++.+.++.||++.. +...|.++++..
T Consensus 346 ~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~ 384 (388)
T 3pe7_A 346 EGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLPE 384 (388)
T ss_dssp TTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCG
T ss_pred ccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECCh
Confidence 3567789888999999864 345566666654
No 142
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.47 E-value=0.0008 Score=64.77 Aligned_cols=275 Identities=6% Similarity=-0.124 Sum_probs=158.9
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.++++++.++.|+....+ +.|...+..+.... .+......+.. ++.+.++.|+.+ +.|.+.+
T Consensus 110 ~v~~~~~s~~~~~l~~~~~d-g~i~i~~~~~~~~~-----------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVEN-GELRLWNKTGALLN-----------VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWN 177 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-SCEEEEETTSCEEE-----------EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCC-CeEEEEeCCCCeee-----------eccCCCccEEEEEECCCCCEEEEEecCCeEEEEE
Confidence 49999999987777666544 56665553322111 12222334555 666666656655 6788888
Q ss_pred cCCceEEEEEcCCCCC---------------ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEE
Q psy14258 158 HYMEHCMIAIDLNLSK---------------PRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGV 222 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~---------------P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl 222 (440)
+........+...... ...++..+ .+.++..... +.|...++........+.........+
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---g~i~~~d~~~~~~~~~~~~~~~~i~~~ 253 (425)
T 1r5m_A 178 VISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-DDKFVIPGPK---GAIFVYQITEKTPTGKLIGHHGPISVL 253 (425)
T ss_dssp TTTTEEEEEECCC---------------CCCBSCCEEEE-TTEEEEECGG---GCEEEEETTCSSCSEEECCCSSCEEEE
T ss_pred CCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC-CCEEEEEcCC---CeEEEEEcCCCceeeeeccCCCceEEE
Confidence 8765544333322222 67788877 4665555443 578888887654443443334456789
Q ss_pred EEeCCCCEEEEEeCCCCcEEEEEccCCC-cEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCC
Q psy14258 223 TVDFPTKHVYWVDTYLDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFS 301 (440)
Q Consensus 223 ~vD~~~~~ly~~d~~~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~ 301 (440)
++.+.+..|+.+. ..+.|...++.... ...+... ......+++..+.++++-...+.|...+..+++....+....
T Consensus 254 ~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 330 (425)
T 1r5m_A 254 EFNDTNKLLLSAS-DDGTLRIWHGGNGNSQNCFYGH--SQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDG 330 (425)
T ss_dssp EEETTTTEEEEEE-TTSCEEEECSSSBSCSEEECCC--SSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTT
T ss_pred EECCCCCEEEEEc-CCCEEEEEECCCCccceEecCC--CccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCC
Confidence 9997777666654 56678888875433 3333222 335677887765455555667888888877666555444322
Q ss_pred -CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCC----------------ceeeeeecCC--C-CceE
Q psy14258 302 -RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTT----------------EQAIMPITDL--K-RPSV 360 (440)
Q Consensus 302 -~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~----------------~~~~~~~~~~--~-~p~~ 360 (440)
.+..+.+. |+ .+|+.+ +..+.|+..++...... ......+... . .+..
T Consensus 331 ~~i~~~~~s----------~~~~~l~~~-~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 399 (425)
T 1r5m_A 331 VPIFAGRIS----------QDGQKYAVA-FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFD 399 (425)
T ss_dssp CCEEEEEEC----------TTSSEEEEE-ETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEE
T ss_pred ccEEEEEEc----------CCCCEEEEE-ECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEE
Confidence 33444433 23 344444 33477887777644100 0012222222 2 5678
Q ss_pred EEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 361 IDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 361 l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
++|.+.+..|+.+. ..+.|+..++.|
T Consensus 400 ~~~s~~~~~l~~~~-~dg~i~iw~~~g 425 (425)
T 1r5m_A 400 LSWNCAGNKISVAY-SLQEGSVVAIPG 425 (425)
T ss_dssp EEECTTSSEEEEEE-SSSCCEEEECCC
T ss_pred EEccCCCceEEEEe-cCceEEEEeecC
Confidence 99998888776554 567777776654
No 143
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.47 E-value=0.00023 Score=78.24 Aligned_cols=340 Identities=10% Similarity=-0.097 Sum_probs=184.3
Q ss_pred eEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-ee
Q psy14258 62 FGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF 140 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-av 140 (440)
|..+++++........... ...+++++.++.|.++. .+.|+..++....+..+.................+.. ++
T Consensus 228 l~~~~~~g~~~~~l~~~~~--~~~~~~SpDG~~la~~~--~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~ 303 (1045)
T 1k32_A 228 IYSTDLDGKDLRKHTSFTD--YYPRHLNTDGRRILFSK--GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDF 303 (1045)
T ss_dssp EEEEETTSCSCEECCCCCS--SCEEEEEESSSCEEEEE--TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEE
T ss_pred EEEEeCCCCcceEecCCCC--cceeeEcCCCCEEEEEe--CCEEEEecCCceEeeeeccCcccccccccccccccceeee
Confidence 5556665543331111112 33456777777777663 3556655542222111100000000000011224667 88
Q ss_pred e-ecCCcEEEe--ceEEEEecCCceEEEEEcCCCC-CceEEEEcCCCCeEEEEEcCCCCCcEE-EEeCCCCCceeEEecC
Q psy14258 141 P-MVTHKIVYP--EAIYFCTHYMEHCMIAIDLNLS-KPRGIALDPTSGYMFFTKWGATRPMLE-RSLLDGTERFPMVTHK 215 (440)
Q Consensus 141 D-~~~~~lY~~--~~I~~~~~dg~~~~~~~~~~~~-~P~~iavd~~~g~lywtd~~~~~~~I~-r~~~dG~~~~~l~~~~ 215 (440)
. +.++.|.++ +.|.+.+.++.....+ ..... .+.+++.. ....|++.... .+|+ ..++++...+.+. ..
T Consensus 304 S~pdG~~la~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~s-dg~~l~~~s~~---~~l~~~~d~~~~~~~~l~-~~ 377 (1045)
T 1k32_A 304 SPLDGDLIAFVSRGQAFIQDVSGTYVLKV-PEPLRIRYVRRGGD-TKVAFIHGTRE---GDFLGIYDYRTGKAEKFE-EN 377 (1045)
T ss_dssp EECGGGCEEEEETTEEEEECTTSSBEEEC-SCCSCEEEEEECSS-SEEEEEEEETT---EEEEEEEETTTCCEEECC-CC
T ss_pred cCCCCCEEEEEEcCEEEEEcCCCCceEEc-cCCCcceEEeeeEc-CCCeEEEEECC---CceEEEEECCCCCceEec-CC
Confidence 8 888877777 7888888877654443 22223 55667776 44456666542 5888 8888876655444 33
Q ss_pred ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEecC---------CCeEE
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTSWR---------NQSII 284 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~---------~~~i~ 284 (440)
...+..+++.+.+.+|+++.. .+.|...++.+.....+..+. .....++++..| .|.++... ...|+
T Consensus 378 ~~~~~~~~~SpDG~~la~~~~-~~~v~~~d~~tg~~~~~~~~~-~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 378 LGNVFAMGVDRNGKFAVVAND-RFEIMTVDLETGKPTVIERSR-EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CCSEEEEEECTTSSEEEEEET-TSEEEEEETTTCCEEEEEECS-SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred ccceeeeEECCCCCEEEEECC-CCeEEEEECCCCceEEeccCC-CCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 456788999988888988764 468999998776666665321 223356666543 67666542 25787
Q ss_pred EEeccCCCceEEEe-cCCCCeEEEEeccCCCCCCCCCc-eeEEeecCC-----------------ccEEEEEEcCCCCCC
Q psy14258 285 RVNKFNSDDYETIA-NFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGK-----------------PAIIKGLTFKRDGTT 345 (440)
Q Consensus 285 ~~~~~~g~~~~~~~-~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~-----------------~~~I~~i~~~~~~~~ 345 (440)
..+..+++ ...+. ....+..+.+. |+ .+|+++... ...++.+.+......
T Consensus 456 l~d~~~g~-~~~l~~~~~~~~~~~~s----------pdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1045)
T 1k32_A 456 VYDMEGRK-IFAATTENSHDYAPAFD----------ADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 524 (1045)
T ss_dssp EEETTTTE-EEECSCSSSBEEEEEEC----------TTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred EEECCCCc-EEEeeCCCcccCCceEc----------CCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCC
Confidence 77876654 22222 11122222221 11 223322211 012233333211000
Q ss_pred ---------------------ceeeeeecCC-CCceEEEEEcCCCEEEE------------EECCCCeEEEEecCCCCeE
Q psy14258 346 ---------------------EQAIMPITDL-KRPSVIDYHEKEEYIYY------------AELTSYVIERRKMFGRGKE 391 (440)
Q Consensus 346 ---------------------~~~~~~~~~~-~~p~~l~~d~~~~~vy~------------~d~~~~~I~r~~~~g~~~~ 391 (440)
.....++... ....++++.+.+..+|. +......|++.++.+...+
T Consensus 525 ~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~ 604 (1045)
T 1k32_A 525 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT 604 (1045)
T ss_dssp GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE
T ss_pred ccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcEE
Confidence 0011222111 23457888875543432 1234568999998876655
Q ss_pred EEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 392 VVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 392 ~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.+. ..+..+++.+.++.|+++..+ .|.+.++..
T Consensus 605 ~l~----~~v~~~~~S~DG~~l~~~~~~--~i~~~d~~~ 637 (1045)
T 1k32_A 605 EVK----NNLTDLRLSADRKTVMVRKDD--GKIYTFPLE 637 (1045)
T ss_dssp EEE----EEEEEEEECTTSCEEEEEETT--SCEEEEESS
T ss_pred Eee----cCcceEEECCCCCEEEEEcCC--cEEEEeCcc
Confidence 554 357889999999999999765 688888854
No 144
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.46 E-value=0.0011 Score=62.47 Aligned_cols=281 Identities=8% Similarity=-0.059 Sum_probs=167.6
Q ss_pred eeccccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC
Q psy14258 129 LERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD 204 (440)
Q Consensus 129 ~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d 204 (440)
+...-..+.. ++.+.++.|+.+ +.|.+.++........+........++++.|...+|+.+... +.|...+++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~i~iwd~~ 104 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD---YSIKLWDVS 104 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---TEEEEEETT
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC---CeEEEEECC
Confidence 3344445666 777766655555 678888877655444444455678899999965555555443 588888887
Q ss_pred CCCceeEEecCccCceEEEEeCCCCEEEEEeCC----CCcEEEEEccCCC------------cEEEecCCccCceeeeeE
Q psy14258 205 GTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY----LDFIDRINYDGTD------------RKTIRKGFPVQNLYDITV 268 (440)
Q Consensus 205 G~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~----~~~i~~~~~dG~~------------~~~i~~~~~~~~p~gl~~ 268 (440)
.......+. .-..+..+++.+.+..|+.+... .+.|...++.... ...+...........+++
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 554444433 33467889999877777776543 1567776654321 111111111114556666
Q ss_pred ecC--EEEEEecCCCeEEEEeccC-CCceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCC
Q psy14258 269 FEN--NLFVTSWRNQSIIRVNKFN-SDDYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDG 343 (440)
Q Consensus 269 ~~~--~ly~td~~~~~i~~~~~~~-g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~ 343 (440)
..+ .|+.. ...+.|...+..+ ++....+.... ....+.+. |+ .+|+.+ +..+.|+.+++...
T Consensus 184 ~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~l~~~-~~d~~i~v~d~~~~- 250 (369)
T 3zwl_B 184 STKGKYIIAG-HKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFS----------PDLTYFITS-SRDTNSFLVDVSTL- 250 (369)
T ss_dssp CGGGCEEEEE-ETTSEEEEEETTTTTEEEEEEECCSSCEEEEEEC----------TTSSEEEEE-ETTSEEEEEETTTC-
T ss_pred cCCCCEEEEE-cCCCEEEEEECCCCcEeEEEEecCCCceeEEEEC----------CCCCEEEEe-cCCceEEEEECCCC-
Confidence 544 44444 4567888888766 33333443322 33444443 23 344444 33478888888655
Q ss_pred CCceeeeeecCCCCceEEEEEcCCCEEEEEECCCC-------------eEEEEecCCCCeEEEEECCCCCeeeEEEecCC
Q psy14258 344 TTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSY-------------VIERRKMFGRGKEVVIDTGIYNVEGMAVDWMA 410 (440)
Q Consensus 344 ~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~-------------~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~ 410 (440)
.....+..-.....+++++.+..++.+....+ .|...+.........+...-..+..+++.+.+
T Consensus 251 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 251 ---QVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp ---CEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred ---ceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 22223333345678999999998887764332 56666665544444444455778999998766
Q ss_pred CcEEEEeCCCCeEEEEEeCC
Q psy14258 411 NNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 411 ~~lYwtd~~~~~I~~~~~~g 430 (440)
+ +..+-...+.|.+.+++.
T Consensus 328 ~-~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 328 T-SYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp S-EEEEEETTSEEEEEEECH
T ss_pred C-EEEEEcCCCeEEEEECcc
Confidence 5 444545578899998875
No 145
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.43 E-value=0.00037 Score=66.73 Aligned_cols=278 Identities=7% Similarity=-0.078 Sum_probs=151.2
Q ss_pred EEeeecccEEEEEEcCCC--CceeEEeCCCCCcceeeccccccceeecccccc-ce-eeeecCCcEEEe---ceEEEEec
Q psy14258 86 FCTHYMEHCMIAIDLNLS--KPRGIALDPTSGYMFFTKWGATRPMLERSLLDG-TE-RFPMVTHKIVYP---EAIYFCTH 158 (440)
Q Consensus 86 i~~d~~~~~ly~~d~~~~--~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p-~~-avD~~~~~lY~~---~~I~~~~~ 158 (440)
.++.+.+++|+++....+ .|+.+++++..... +...-..+ .+ ++.+.++.|+++ ..|.+.++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-----------lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-----------LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDL 109 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-----------CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEET
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-----------eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEEC
Confidence 457777787777765333 46666665443221 11111222 35 788888889988 47999999
Q ss_pred CCceEEEEEcCCCCCc--eEEEEcCCCCeEEEEE--------------------cCCCCCcEEEEeCCCCCceeEEecCc
Q psy14258 159 YMEHCMIAIDLNLSKP--RGIALDPTSGYMFFTK--------------------WGATRPMLERSLLDGTERFPMVTHKI 216 (440)
Q Consensus 159 dg~~~~~~~~~~~~~P--~~iavd~~~g~lywtd--------------------~~~~~~~I~r~~~dG~~~~~l~~~~~ 216 (440)
++...+.+........ ...+++|....+.... .... ..|.+.++++...+.+... .
T Consensus 110 ~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~d~~~g~~~~l~~~-~ 187 (388)
T 3pe7_A 110 ATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPC-CRLMRVDLKTGESTVILQE-N 187 (388)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCC-EEEEEEETTTCCEEEEEEE-S
T ss_pred CCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCc-ceEEEEECCCCceEEeecC-C
Confidence 8877665554322211 1233466434443221 1111 5799999987766655543 3
Q ss_pred cCceEEEEeC-CCCEEEEEeCC-----CCcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEE-EecCCC---eEE
Q psy14258 217 VYPYGVTVDF-PTKHVYWVDTY-----LDFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFV-TSWRNQ---SII 284 (440)
Q Consensus 217 ~~P~gl~vD~-~~~~ly~~d~~-----~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~-td~~~~---~i~ 284 (440)
.....+++.+ .+.+|.++... ...|+.++.+|...+.+...........+++. +..|++ ++.... .|+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIY 267 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEE
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEE
Confidence 4567889998 77888776643 34899999998877766543100123344554 345654 443222 388
Q ss_pred EEeccCCCceEEEecCCCCeEEEEeccCCCCCCC--CCc-eeEEeec--------CCccEEEEEEcCCCCCCceeeeeec
Q psy14258 285 RVNKFNSDDYETIANFSRPFAIHIYHRQKQPDAL--KPS-TFLLYAK--------GKPAIIKGLTFKRDGTTEQAIMPIT 353 (440)
Q Consensus 285 ~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~--~~~-~~l~~~~--------~~~~~I~~i~~~~~~~~~~~~~~~~ 353 (440)
.++..+|+...+.. .......... +... .|+ ..|+++. .....|+.+++++. .......
T Consensus 268 ~~d~~~g~~~~l~~-~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~l~~ 337 (388)
T 3pe7_A 268 SADPETLENRQLTS-MPACSHLMSN-----YDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNG----TQHRVAR 337 (388)
T ss_dssp EECTTTCCEEEEEE-ECCEEEEEEC-----TTSSEEEEEECCC------------CCCCEEEEEETTTT----EEEEEEE
T ss_pred EEecCCCceEEEEc-CCCceeeeec-----CCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCC----ceEEecc
Confidence 88887776543322 1110000000 0000 122 2333321 23467888887765 1111111
Q ss_pred CCC-----------CceEEEEEcCCCEEEEEECC--CCeEEEEecC
Q psy14258 354 DLK-----------RPSVIDYHEKEEYIYYAELT--SYVIERRKMF 386 (440)
Q Consensus 354 ~~~-----------~p~~l~~d~~~~~vy~~d~~--~~~I~r~~~~ 386 (440)
... ....+++.+++++|+++... ...|+++++.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 338 HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 383 (388)
T ss_dssp CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECC
T ss_pred ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEECC
Confidence 111 24567899999999988743 3457777665
No 146
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.39 E-value=0.00013 Score=68.94 Aligned_cols=193 Identities=10% Similarity=-0.023 Sum_probs=120.0
Q ss_pred ceeEEEEeecccceeeeEEEecCCCceeeeeecccceEEEEEeeeccc-------EEEEEEcC--CCCceeEEeCCCCCc
Q psy14258 46 VKTHLYETIEAFWEECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEH-------CMIAIDLN--LSKPRGIALDPTSGY 116 (440)
Q Consensus 46 ~~~ll~s~~~~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~-------~ly~~d~~--~~~I~~~~~~~~~~~ 116 (440)
.+.+++++.+. +.+...+++|..... ++... +.++|+-+.-. .+|.++.. .++|..+.++....
T Consensus 39 ~~s~ii~t~k~---~gL~Vydl~G~~l~~-~~~g~--~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~- 111 (355)
T 3amr_A 39 QNSKLITTNKK---SGLVVYSLDGKMLHS-YNTGK--LNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG- 111 (355)
T ss_dssp GGCEEEEEETT---TEEEEEETTSCEEEE-ECCSC--EEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-
T ss_pred CccEEEEEcCC---CCEEEEcCCCcEEEE-ccCCC--cccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-
Confidence 44566666443 348889998887762 22222 66666665322 57889988 88887777764321
Q ss_pred ceeeccccccceeeccccccce-ee--eecCCcE--EEe---ceEEEEec----CCceEEEEEcC--CCCCceEEEEcCC
Q psy14258 117 MFFTKWGATRPMLERSLLDGTE-RF--PMVTHKI--VYP---EAIYFCTH----YMEHCMIAIDL--NLSKPRGIALDPT 182 (440)
Q Consensus 117 ~~~~~~~~~~v~~~~~~~~p~~-av--D~~~~~l--Y~~---~~I~~~~~----dg~~~~~~~~~--~~~~P~~iavd~~ 182 (440)
.+...+.. ...+...+..|.| ++ ++.++.+ |++ +++....+ +|.....++.. --.+|.++++|+.
T Consensus 112 ~l~~i~~~-~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~ 190 (355)
T 3amr_A 112 TLQSMTDP-DHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDE 190 (355)
T ss_dssp CEEECSCT-TSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETT
T ss_pred ceeecccc-ccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCC
Confidence 12111110 0012345689999 99 8877764 444 55555433 33222222221 1258999999999
Q ss_pred CCeEEEEEcCCCCCcEEEEeCC--CCC-ceeEEe---cCcc-CceEEEEeCCC---CEEEEEeCCCCcEEEEEccCC
Q psy14258 183 SGYMFFTKWGATRPMLERSLLD--GTE-RFPMVT---HKIV-YPYGVTVDFPT---KHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 183 ~g~lywtd~~~~~~~I~r~~~d--G~~-~~~l~~---~~~~-~P~gl~vD~~~---~~ly~~d~~~~~i~~~~~dG~ 249 (440)
.|+||++++.. .|++.+.+ +.. ++.+.. ..+. .|.||+|.+.. ++|+.++.+.+....++..++
T Consensus 191 ~g~Lyv~eEd~---GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 191 YGRLYIAEEDE---AIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp TTEEEEEETTT---EEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred CCeEEEecccc---eEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 99999999883 69999965 322 333322 1233 79999996443 589999988888888887654
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.36 E-value=0.00026 Score=64.41 Aligned_cols=218 Identities=10% Similarity=0.026 Sum_probs=132.4
Q ss_pred CcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC-CCcEEEecCCccCceeeeeEecC--E
Q psy14258 196 PMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG-TDRKTIRKGFPVQNLYDITVFEN--N 272 (440)
Q Consensus 196 ~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG-~~~~~i~~~~~~~~p~gl~~~~~--~ 272 (440)
..|...++++.....+... -..+..+++.+.+.+|+++. .+.|...++++ .....+........+..+++..+ .
T Consensus 22 ~~i~~~d~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQT-PELFEAPNWSPDGKYLLLNS--EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp EEEEEEETTTTEEEEEEEE-SSCCEEEEECTTSSEEEEEE--TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred eeEEEEeCCCCceeeeccC-CcceEeeEECCCCCEEEEEc--CCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 5777777776555444432 34578899998888888875 56899999887 66665544321234556777543 7
Q ss_pred EEEEecC---CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCcc--EEEEEEcCCCCCCc
Q psy14258 273 LFVTSWR---NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPA--IIKGLTFKRDGTTE 346 (440)
Q Consensus 273 ly~td~~---~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~--~I~~i~~~~~~~~~ 346 (440)
|+++... ...|+.++..+++. ..+.....+..+.+. |+ .+|+++....+ .|+.+++++.
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~s----------pdg~~l~~~~~~~~~~~l~~~~~~~~---- 163 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGTP-RLMTKNLPSYWHGWS----------PDGKSFTYCGIRDQVFDIYSMDIDSG---- 163 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCCC-EECCSSSSEEEEEEC----------TTSSEEEEEEEETTEEEEEEEETTTC----
T ss_pred EEEEEeCCCCcceEEEEECCCCce-EEeecCCCccceEEC----------CCCCEEEEEECCCCceEEEEEECCCC----
Confidence 7777632 56788888765543 323222223333222 23 45554443224 4555555443
Q ss_pred eeeeeecCCCCceEEEEEcCCCEEEEEEC--CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCC-----
Q psy14258 347 QAIMPITDLKRPSVIDYHEKEEYIYYAEL--TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAG----- 419 (440)
Q Consensus 347 ~~~~~~~~~~~p~~l~~d~~~~~vy~~d~--~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~----- 419 (440)
...........+..+++++.++.++++.. ....|+.+++++.....+. ..-..+..+++.+.++.|+++...
T Consensus 164 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 242 (297)
T 2ojh_A 164 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT-DSAYGDWFPHPSPSGDKVVFVSYDADVFD 242 (297)
T ss_dssp CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC-CCSEEEEEEEECTTSSEEEEEEEETTCCS
T ss_pred cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe-cCCcccCCeEECCCCCEEEEEEcCCCCCc
Confidence 11111122235678999999998888763 4556777777765444432 233456778898888888887542
Q ss_pred -----CCeEEEEEeCCCe
Q psy14258 420 -----IGTINVAKISDFS 432 (440)
Q Consensus 420 -----~~~I~~~~~~g~~ 432 (440)
...|.+.++++.+
T Consensus 243 ~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 243 HPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CCSSEEEEEEEEETTSCS
T ss_pred ccccCceEEEEEecCCCC
Confidence 2568999988744
No 148
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.34 E-value=0.0042 Score=65.73 Aligned_cols=281 Identities=9% Similarity=0.010 Sum_probs=174.0
Q ss_pred cccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy14258 132 SLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE 207 (440)
Q Consensus 132 ~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~ 207 (440)
.-..+.+ ++.+.+..|..+ +.|.+.+.........+...-....+++..|...+|...... +.|...+++...
T Consensus 12 h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~i~vw~~~~~~ 88 (814)
T 3mkq_A 12 RSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGE 88 (814)
T ss_dssp ECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCC
T ss_pred CCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCc
Confidence 3345667 787777766665 688888876554443444445678999999966666666543 588888887554
Q ss_pred ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC-CcEEEecCCccCceeeeeEec--CEEEEEecCCCeEE
Q psy14258 208 RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT-DRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSII 284 (440)
Q Consensus 208 ~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~-~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~ 284 (440)
....+.........+++.+.+..|+.+. ..+.|...+++.. .......+. -.....+++.. +.++++-...+.|.
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~i~vw~~~~~~~~~~~~~~~-~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGS-DDLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEE-TTSEEEEEEGGGTSEEEEEEECC-SSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEc-CCCEEEEEECCCCceEEEEEcCC-CCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4333443445678899998777777665 4567888887654 333333321 23457778765 35666666678888
Q ss_pred EEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEE
Q psy14258 285 RVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVI 361 (440)
Q Consensus 285 ~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l 361 (440)
..+..+++....+.... .+.....+++. ++ .+|+.+ +..+.|...++... .....+. .......+
T Consensus 167 vwd~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~l~~~-~~dg~i~~~d~~~~----~~~~~~~~~~~~v~~~ 234 (814)
T 3mkq_A 167 VWSLGQSTPNFTLTTGQERGVNYVDYYPL-------PDKPYMITA-SDDLTIKIWDYQTK----SCVATLEGHMSNVSFA 234 (814)
T ss_dssp EEETTCSSCSEEEECCCTTCCCEEEECCS-------TTCCEEEEE-CTTSEEEEEETTTT----EEEEEEECCSSCEEEE
T ss_pred EEECCCCcceeEEecCCCCCEEEEEEEEC-------CCCCEEEEE-eCCCEEEEEECCCC----cEEEEEcCCCCCEEEE
Confidence 88876666555443222 22222223221 13 344444 34478888887655 2222222 23356789
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++.+.+..++.. ...+.|+..++...............+..+++.+.+.+++.+-...+.+.+.++..
T Consensus 235 ~~~~~~~~l~~~-~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (814)
T 3mkq_A 235 VFHPTLPIIISG-SEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (814)
T ss_dssp EECSSSSEEEEE-ETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSC
T ss_pred EEcCCCCEEEEE-eCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCC
Confidence 999987755444 46788988888764444444445567888888887777666655566677776543
No 149
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.31 E-value=0.003 Score=60.95 Aligned_cols=270 Identities=8% Similarity=-0.018 Sum_probs=168.8
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceEEEEEcC-CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDL-NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH 214 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~-~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~ 214 (440)
+++|..++++.+ +.|.+.+++......+... .......+++.|...+|+..... +.|...++........+..
T Consensus 98 ~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d---g~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 98 LLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN---GLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp CEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT---SCEEEEETTTCCEEEEECC
T ss_pred EEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC---CeEEEEECcCCeEEEEecC
Confidence 688888877655 7899999886665544443 34668899999965566655544 5788888865544333333
Q ss_pred CccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC-CCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCC
Q psy14258 215 KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG-TDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSD 292 (440)
Q Consensus 215 ~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG-~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~ 292 (440)
.-.....++.+ ...|+.+ ...+.|...++.. ........+ ......++++..+ .++.+-...+.|...+..+++
T Consensus 175 ~~~~v~~~~~~--~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 175 HQARVGCLSWN--RHVLSSG-SRSGAIHHHDVRIANHQIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI 250 (401)
T ss_dssp CSSCEEEEEEE--TTEEEEE-ETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS
T ss_pred CCCceEEEEEC--CCEEEEE-cCCCCEEEEecccCcceeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC
Confidence 33455667775 4455444 4567888888763 322222222 1345677777644 445554557788888877665
Q ss_pred ceEEEecCC-CCeEEEEeccCCCCCCCCC-ceeEEeecC--CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCC
Q psy14258 293 DYETIANFS-RPFAIHIYHRQKQPDALKP-STFLLYAKG--KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEE 368 (440)
Q Consensus 293 ~~~~~~~~~-~p~~~~v~~~~~qp~~~~~-~~~l~~~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~ 368 (440)
....+.... ....+.+. | ...++++-+ ..+.|+..++... .....+..-....++++.+.+.
T Consensus 251 ~~~~~~~~~~~v~~~~~~----------p~~~~ll~~~~gs~d~~i~i~d~~~~----~~~~~~~~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 251 PKFTKTNHNAAVKAVAWC----------PWQSNLLATGGGTMDKQIHFWNAATG----ARVNTVDAGSQVTSLIWSPHSK 316 (401)
T ss_dssp EEEEECCCSSCCCEEEEC----------TTSTTEEEEECCTTTCEEEEEETTTC----CEEEEEECSSCEEEEEECSSSS
T ss_pred ccEEecCCcceEEEEEEC----------CCCCCEEEEecCCCCCEEEEEECCCC----CEEEEEeCCCcEEEEEECCCCC
Confidence 555443322 33445443 2 234555432 3578888888655 2223333344678999999988
Q ss_pred EEEEEE-CCCCeEEEEecCCCCeEEE--EECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 369 YIYYAE-LTSYVIERRKMFGRGKEVV--IDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 369 ~vy~~d-~~~~~I~r~~~~g~~~~~~--~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.++.+. ...+.|...++........ +...-..+..+++.+.+..|+ +-...+.|.+.++..
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~-s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILS-TAASDENLKFWRVYD 380 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEE-EECTTSEEEEEECCC
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEE-EEeCCCcEEEEECCC
Confidence 887764 3578888888876433332 334456788999998666554 445578999999875
No 150
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.30 E-value=0.0013 Score=63.53 Aligned_cols=264 Identities=8% Similarity=-0.063 Sum_probs=155.9
Q ss_pred ceEEEEecCCceEE----EEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC-------ceeEEecCccCc
Q psy14258 151 EAIYFCTHYMEHCM----IAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-------RFPMVTHKIVYP 219 (440)
Q Consensus 151 ~~I~~~~~dg~~~~----~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~-------~~~l~~~~~~~P 219 (440)
+.|.+.+++..... ..+........++++.|..+.++.+-... +.|...+++... ....+...-...
T Consensus 57 g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~d--g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v 134 (402)
T 2aq5_A 57 GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSED--CTVMVWEIPDGGLVLPLREPVITLEGHTKRV 134 (402)
T ss_dssp CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETT--SEEEEEECCTTCCSSCBCSCSEEEECCSSCE
T ss_pred CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCC--CeEEEEEccCCCCccccCCceEEecCCCCeE
Confidence 56777777553221 11122345678999999445555544333 578888876542 222233334567
Q ss_pred eEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec-CCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 220 YGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK-GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 220 ~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
..+++.+.+.+++++-...+.|...++.......... .........+++..+ .++++-...+.|...+..+++....+
T Consensus 135 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 135 GIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp EEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 8899987765555555566788888876544333331 111334577777643 44444445788888887776655544
Q ss_pred -ecCC--CCeEEEEeccCCCCCCCCCceeEEeec---CCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEE
Q psy14258 298 -ANFS--RPFAIHIYHRQKQPDALKPSTFLLYAK---GKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIY 371 (440)
Q Consensus 298 -~~~~--~p~~~~v~~~~~qp~~~~~~~~l~~~~---~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy 371 (440)
..-. .+..+... |++.++++- +..+.|...++... ........+........++|++.++.+|
T Consensus 215 ~~~~~~~~~~~~~~~----------~~~~~l~~g~~~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 283 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFV----------SEGKILTTGFSRMSERQVALWDTKHL-EEPLSLQELDTSSGVLLPFFDPDTNIVY 283 (402)
T ss_dssp ECSSCSSSCCEEEEC----------STTEEEEEEECTTCCEEEEEEETTBC-SSCSEEEECCCCSSCEEEEEETTTTEEE
T ss_pred ccCCCCCcceEEEEc----------CCCcEEEEeccCCCCceEEEEcCccc-cCCceEEeccCCCceeEEEEcCCCCEEE
Confidence 2222 23444433 343344432 34588988888765 2111122333344577999999999999
Q ss_pred EEECCCCeEEEEecCCCC--eEEEEE-CCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 372 YAELTSYVIERRKMFGRG--KEVVID-TGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 372 ~~d~~~~~I~r~~~~g~~--~~~~~~-~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++....+.|+..++.... ...+.. ..-..+.++++.+.+..+.. +.+.+.+.++..
T Consensus 284 ~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s---~~~~~~~~~l~~ 342 (402)
T 2aq5_A 284 LCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN---KCEIARFYKLHE 342 (402)
T ss_dssp EEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG---GTEEEEEEEEET
T ss_pred EEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee---cceeEEEEEcCC
Confidence 998888999999987654 333322 23356889999876654432 234677777665
No 151
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.29 E-value=0.00052 Score=72.07 Aligned_cols=274 Identities=8% Similarity=0.036 Sum_probs=158.8
Q ss_pred ccce-eeeecCCcEEEe----c-----eEEEEecCCceEEEEEcCCCC------------------------CceEEEEc
Q psy14258 135 DGTE-RFPMVTHKIVYP----E-----AIYFCTHYMEHCMIAIDLNLS------------------------KPRGIALD 180 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~-----~I~~~~~dg~~~~~~~~~~~~------------------------~P~~iavd 180 (440)
.+.. ++.+.++.|+++ + .|.+.++++...+.+...... ...++++.
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~S 117 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWS 117 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEEC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEEC
Confidence 4667 888888888877 3 689999987766655542211 25789999
Q ss_pred CCCCeEEEEEcCCCCCcEEEEeCCCC---CceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC
Q psy14258 181 PTSGYMFFTKWGATRPMLERSLLDGT---ERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG 257 (440)
Q Consensus 181 ~~~g~lywtd~~~~~~~I~r~~~dG~---~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~ 257 (440)
|...+|+++.. ..|+..++++. ..+.+.. .-..+..+++.+.+++|+++.. +.|...++++.....+...
T Consensus 118 pDg~~l~~~~~----~~i~~~d~~~~~~~~~~~l~~-~~~~~~~~~~SPDG~~la~~~~--~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 118 PDAQRLLFPLG----GELYLYDLKQEGKAAVRQLTH-GEGFATDAKLSPKGGFVSFIRG--RNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp TTSSEEEEEET----TEEEEEESSSCSTTSCCBCCC-SSSCEEEEEECTTSSEEEEEET--TEEEEEETTTTEEEECCCC
T ss_pred CCCCEEEEEeC----CcEEEEECCCCCcceEEEccc-CCcccccccCCCCCCEEEEEeC--CcEEEEecCCCCEEEeccC
Confidence 97777888775 48999999887 4444432 2345788999999998988864 4799999887655444332
Q ss_pred Ccc---------------CceeeeeEec--CEEEEEecCCC--------------------------------eEEEEec
Q psy14258 258 FPV---------------QNLYDITVFE--NNLFVTSWRNQ--------------------------------SIIRVNK 288 (440)
Q Consensus 258 ~~~---------------~~p~gl~~~~--~~ly~td~~~~--------------------------------~i~~~~~ 288 (440)
... ..+.++++.. ..|+++..... .|+.++.
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~ 270 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISP 270 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECS
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEEC
Confidence 100 0135566653 46777643221 4555555
Q ss_pred cC-CCceEEEecCC---CCeEEEEeccCCCCCCCCCceeEEeecC----CccEEEEEEcCCCCCCceeeeeecCC---CC
Q psy14258 289 FN-SDDYETIANFS---RPFAIHIYHRQKQPDALKPSTFLLYAKG----KPAIIKGLTFKRDGTTEQAIMPITDL---KR 357 (440)
Q Consensus 289 ~~-g~~~~~~~~~~---~p~~~~v~~~~~qp~~~~~~~~l~~~~~----~~~~I~~i~~~~~~~~~~~~~~~~~~---~~ 357 (440)
.+ ++...+..... .+..+.+ |. ..+|+++.. ....|+.+++++. ... .......- ..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~------pD----g~~l~~~~~~~~~~~~~i~~~d~~~g-~~~-~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 271 AEQAQTQWIDLGKEQDIYLARVNW------RD----PQHLSFQRQSRDQKKLDLVEVTLASN-QQR-VLAHETSPTWVPL 338 (741)
T ss_dssp STTCCCEEECCCSCSSEEEEEEEE------EE----TTEEEEEEEETTSSEEEEEEEETTTC-CEE-EEEEEECSSCCCC
T ss_pred CCCCceEEecCCCCcceEEEEEEe------CC----CCEEEEEEecccCCeEEEEEEECCCC-ceE-EEEEcCCCCcCCc
Confidence 54 44332221101 1112222 11 133444321 2356777777654 111 11111110 02
Q ss_pred ceEEEEEcCCCEEEEEECCC--CeEEEEecCCCCeEEEEECCCCCeeeE-EEecCCCcEEEEeCCC----CeEEEEEeCC
Q psy14258 358 PSVIDYHEKEEYIYYAELTS--YVIERRKMFGRGKEVVIDTGIYNVEGM-AVDWMANNLYWTDAGI----GTINVAKISD 430 (440)
Q Consensus 358 p~~l~~d~~~~~vy~~d~~~--~~I~r~~~~g~~~~~~~~~~~~~~~gl-AvD~~~~~lYwtd~~~----~~I~~~~~~g 430 (440)
...++|.++++ ++++.... ..|++++++|. ...+ ..+-..+..+ +++..++.||++-... ..|..++++|
T Consensus 339 ~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~~-~~~l-~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g 415 (741)
T 2ecf_A 339 HNSLRFLDDGS-ILWSSERTGFQHLYRIDSKGK-AAAL-THGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQG 415 (741)
T ss_dssp CSCCEECTTSC-EEEEECTTSSCEEEEECSSSC-EEES-CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTC
T ss_pred CCceEECCCCe-EEEEecCCCccEEEEEcCCCC-eeee-eecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCC
Confidence 24688988877 55554444 47888888776 4333 2233445566 5898888898875543 3455555666
No 152
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.26 E-value=0.00048 Score=71.35 Aligned_cols=231 Identities=9% Similarity=0.014 Sum_probs=129.1
Q ss_pred CCCCe-EEEEEcCCCCCcEEEEeCC--C-CCceeEEec----CccCceEEEEeCCCCEEEEEeCC---------CCcEEE
Q psy14258 181 PTSGY-MFFTKWGATRPMLERSLLD--G-TERFPMVTH----KIVYPYGVTVDFPTKHVYWVDTY---------LDFIDR 243 (440)
Q Consensus 181 ~~~g~-lywtd~~~~~~~I~r~~~d--G-~~~~~l~~~----~~~~P~gl~vD~~~~~ly~~d~~---------~~~i~~ 243 (440)
|..++ |+++.... .+|+..+++ | ...+.+... ....+..+++.+.+++|+++... ...|..
T Consensus 88 PDg~~~la~~~~~~--~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 88 PAGGPLLVFTHFGD--QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp SSSSCEEEEEBTTT--CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEE
T ss_pred cCCCeEEEEEECCC--CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEE
Confidence 76677 88887653 689999998 5 444444331 23456789999999999887643 147999
Q ss_pred EEccC------CCcEEEe-cCCccCceeeeeEe--cCEEEEEecCC-------CeEEEEecc-CCC--ceE-EEecC-CC
Q psy14258 244 INYDG------TDRKTIR-KGFPVQNLYDITVF--ENNLFVTSWRN-------QSIIRVNKF-NSD--DYE-TIANF-SR 302 (440)
Q Consensus 244 ~~~dG------~~~~~i~-~~~~~~~p~gl~~~--~~~ly~td~~~-------~~i~~~~~~-~g~--~~~-~~~~~-~~ 302 (440)
+++++ ...+.+. .+ -....++++. +..|+++.+.. ..|+.++.. +|+ ... +.... ..
T Consensus 166 ~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSAVRELSDDA--HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp EETTSTTTTCGGGSEESSCSC--SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred EECCCCccccCCceeEEEecC--CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 99988 5666554 32 2234455554 44888877543 578888876 352 222 33221 22
Q ss_pred CeEEEEeccCCCCCCCCCceeEEeecCCcc--EEEEEEcCCCCCCceeeeeec-CCCC------ceEEEEEcCCCEEEEE
Q psy14258 303 PFAIHIYHRQKQPDALKPSTFLLYAKGKPA--IIKGLTFKRDGTTEQAIMPIT-DLKR------PSVIDYHEKEEYIYYA 373 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~--~I~~i~~~~~~~~~~~~~~~~-~~~~------p~~l~~d~~~~~vy~~ 373 (440)
+..+... |++-++++....+ .|+++++++. ... ...+.. .... ...+++.+.+..+|.+
T Consensus 244 ~~~~~~s----------pdg~l~~~~~~~~~~~l~~~~~~~~-~~~-~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~ 311 (662)
T 3azo_A 244 IAQAEWA----------PDGSLIVATDRTGWWNLHRVDPATG-AAT-QLCRREEEFAGPLWTPGMRWFAPLANGLIAVVH 311 (662)
T ss_dssp EEEEEEC----------TTSCEEEEECTTSSCEEEEECTTTC-CEE-ESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEE
T ss_pred EcceEEC----------CCCeEEEEECCCCCeEEEEEECCCC-cee-ecccccccccCccccccCceEeEeCCCEEEEEE
Confidence 3333322 3332444433334 7888877544 110 000100 0101 2457776665544444
Q ss_pred ECCCCeEEEEecCCCCeEEEEECCCCCeeeE-EEecCCCcEEEEeCC-C--CeEEEEEeCC
Q psy14258 374 ELTSYVIERRKMFGRGKEVVIDTGIYNVEGM-AVDWMANNLYWTDAG-I--GTINVAKISD 430 (440)
Q Consensus 374 d~~~~~I~r~~~~g~~~~~~~~~~~~~~~gl-AvD~~~~~lYwtd~~-~--~~I~~~~~~g 430 (440)
..+...|+++++++...+.+ ........++ +.| ++.++++-.. . ..|..+++++
T Consensus 312 ~~~~~~l~~~d~~~~~~~~l-~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 312 GKGAAVLGILDPESGELVDA-AGPWTEWAATLTVS--GTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp BSSSCEEEEEETTTTEEEEC-CSSCCEEEEEEEEE--TTEEEEEEEETTEEEEEEEEETTT
T ss_pred EcCccEEEEEECCCCcEEEe-cCCCCeEEEEEecC--CCEEEEEEcCCCCCCEEEEEECCC
Confidence 33455688888876554443 2233445666 666 6666665432 2 2566666655
No 153
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.23 E-value=0.00019 Score=68.85 Aligned_cols=274 Identities=9% Similarity=0.004 Sum_probs=148.8
Q ss_pred cce-eeeecCCcEEEe------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 136 GTE-RFPMVTHKIVYP------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 136 p~~-avD~~~~~lY~~------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
+.. ++.+.++.|+++ ..|.+.++++...+.+.........+++..|...+|+++... ..|++.++++...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~---~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNE---LNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETT---TEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcC---CcEEEEECCCCCc
Confidence 455 677778877766 268888988876655533222112236778877788888755 3799999988766
Q ss_pred eeEEecCcc-CceEEEE------------------eCCCCEEEEEe----CCCCcEEEEEccCCCcEEEecCCccCceee
Q psy14258 209 FPMVTHKIV-YPYGVTV------------------DFPTKHVYWVD----TYLDFIDRINYDGTDRKTIRKGFPVQNLYD 265 (440)
Q Consensus 209 ~~l~~~~~~-~P~gl~v------------------D~~~~~ly~~d----~~~~~i~~~~~dG~~~~~i~~~~~~~~p~g 265 (440)
+.+...... .|.|-.+ .+.+..+++.. .....|..+++++.....+... ......
T Consensus 115 ~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~ 192 (396)
T 3c5m_A 115 QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD--TAWLGH 192 (396)
T ss_dssp EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE--SSCEEE
T ss_pred EEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC--Cccccc
Confidence 655542221 2332111 22233333322 2344677788776665555432 223445
Q ss_pred eeEec---CEEEEEecC-C----CeEEEEeccCCCceEEEecC-C-CCeEEEEeccCCCCCCCCCc-eeEEeecC--Cc-
Q psy14258 266 ITVFE---NNLFVTSWR-N----QSIIRVNKFNSDDYETIANF-S-RPFAIHIYHRQKQPDALKPS-TFLLYAKG--KP- 331 (440)
Q Consensus 266 l~~~~---~~ly~td~~-~----~~i~~~~~~~g~~~~~~~~~-~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~--~~- 331 (440)
+++.. ..|++.... . ..|+.++..+++...+.... . .+..+. +. |+ .+|+++.. ..
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~-~s---------pdg~~l~~~~~~~~~~ 262 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF-WI---------PDGSAMAYVSYFKGQT 262 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE-EC---------TTSSCEEEEEEETTTC
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE-EC---------CCCCEEEEEecCCCCc
Confidence 55543 356655422 2 46888887544433322211 0 111122 21 23 33444421 12
Q ss_pred -cEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc-CCCEEEEEEC---------------CCCeEEEEecCCCCeEEEE
Q psy14258 332 -AIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE-KEEYIYYAEL---------------TSYVIERRKMFGRGKEVVI 394 (440)
Q Consensus 332 -~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~-~~~~vy~~d~---------------~~~~I~r~~~~g~~~~~~~ 394 (440)
..|+.+++++. .. ..+..+.... +++.+ .+..++.+.. ....|+..++++...+.+.
T Consensus 263 ~~~l~~~d~~~g-~~----~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 263 DRVIYKANPETL-EN----EEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp CEEEEEECTTTC-CE----EEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred cceEEEEECCCC-Ce----EEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 34888887654 11 1111111122 77888 7775555431 3478999999876555554
Q ss_pred ECCCC----------CeeeEEEecCCCcEEEEeCC--CCeEEEEEeCC
Q psy14258 395 DTGIY----------NVEGMAVDWMANNLYWTDAG--IGTINVAKISD 430 (440)
Q Consensus 395 ~~~~~----------~~~glAvD~~~~~lYwtd~~--~~~I~~~~~~g 430 (440)
..... .+..+++.+.++.|+++... ...|..+++++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~ 384 (396)
T 3c5m_A 337 KHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPE 384 (396)
T ss_dssp ECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCT
T ss_pred CCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcc
Confidence 42211 14557888888899988653 44677777777
No 154
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.21 E-value=0.00016 Score=69.91 Aligned_cols=281 Identities=7% Similarity=-0.031 Sum_probs=156.9
Q ss_pred EEEEEeeecccEEEEEE----------cCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe-
Q psy14258 83 AIYFCTHYMEHCMIAID----------LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP- 150 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d----------~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~- 150 (440)
+.+++|++.++.+..+- ...+.|+..++....... .+.....-..+.. ++.+.++.|+.+
T Consensus 15 v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~--------~~~~~~~~~~v~~~~~s~~~~~l~~~~ 86 (416)
T 2pm9_A 15 TATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK--------PIASLQVDSKFNDLDWSHNNKIIAGAL 86 (416)
T ss_dssp SCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCS--------CSCCCCCSSCEEEEEECSSSSCEEEEE
T ss_pred cceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCc--------EEEEEecCCceEEEEECCCCCeEEEEc
Confidence 56677887766455554 344566665554322100 0101112233455 666666656555
Q ss_pred --ceEEEEecCC----ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC------ceeEE---ecC
Q psy14258 151 --EAIYFCTHYM----EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE------RFPMV---THK 215 (440)
Q Consensus 151 --~~I~~~~~dg----~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~------~~~l~---~~~ 215 (440)
+.|.+.+++. ......+.........+++.|..+.++.+-... +.|...++.... ..... ...
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN--GEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS--SCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC--CeEEEEECCCCccccccccccccccccCC
Confidence 6888888876 223333333446788999999745555554332 578888887654 21111 112
Q ss_pred ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCc-----cCceeeeeEecC--EEEEEecCCC---eEEE
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFP-----VQNLYDITVFEN--NLFVTSWRNQ---SIIR 285 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~-----~~~p~gl~~~~~--~ly~td~~~~---~i~~ 285 (440)
......+++.+.++.++.+-...+.|...++............. ......+++..+ .++++-...+ .|..
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEE
Confidence 34567899987756666666677889998887654433332210 234567777654 4555555555 7777
Q ss_pred EeccCCCc-eEEEe-cCC-CCeEEEEeccCCCCCCCCC-ceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceE
Q psy14258 286 VNKFNSDD-YETIA-NFS-RPFAIHIYHRQKQPDALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSV 360 (440)
Q Consensus 286 ~~~~~g~~-~~~~~-~~~-~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~ 360 (440)
.+..+++. ...+. .-. .+..+.+. | ++.++++-+..+.|+..++... .....+.. -....+
T Consensus 245 ~d~~~~~~~~~~~~~~~~~~v~~~~~s----------~~~~~~l~s~~~dg~v~~wd~~~~----~~~~~~~~~~~~v~~ 310 (416)
T 2pm9_A 245 WDLRNANTPLQTLNQGHQKGILSLDWC----------HQDEHLLLSSGRDNTVLLWNPESA----EQLSQFPARGNWCFK 310 (416)
T ss_dssp EETTSTTSCSBCCCSCCSSCEEEEEEC----------SSCSSCEEEEESSSEEEEECSSSC----CEEEEEECSSSCCCC
T ss_pred EeCCCCCCCcEEeecCccCceeEEEeC----------CCCCCeEEEEeCCCCEEEeeCCCC----ccceeecCCCCceEE
Confidence 77766532 22332 211 23344333 2 2233333334478888887654 22222222 234568
Q ss_pred EEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 361 IDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 361 l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
++|.+.+..++++-...+.|...++..
T Consensus 311 ~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 311 TKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred EEECCCCCCEEEEEecCCcEEEEEccC
Confidence 999998745667766788888888765
No 155
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.16 E-value=0.0047 Score=57.15 Aligned_cols=276 Identities=9% Similarity=0.030 Sum_probs=152.2
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|++.+..|.-+. ..+.|...++.... .+ ..+...-..... ++.+.++.|+.+ +.|.+.+
T Consensus 15 ~V~~~~fsp~~~~l~s~~-~dg~v~lWd~~~~~--~~--------~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL-YSGRVELWNYETQV--EV--------RSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEETTTTE--EE--------EEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred ceEEEEECCCCCEEEEEc-CCCcEEEEECCCCc--ee--------EEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 399999999877666554 44666655543221 11 011112223445 676666655544 6898889
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc-eeEEecCccCceEEEEeCCCCEEEEEeC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER-FPMVTHKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~-~~l~~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
+....+...+........+|++.|...+|.-.... +.|...++..... ...+...-.....+++++.++.++.+-.
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D---~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD---LTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCC---CeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEe
Confidence 87655444444455678899999965555544433 5788878764422 2222223345678899876655555555
Q ss_pred CCCcEEEEEccCCC-cEEEecCCccCceeeeeEe---cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccC
Q psy14258 237 YLDFIDRINYDGTD-RKTIRKGFPVQNLYDITVF---ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQ 312 (440)
Q Consensus 237 ~~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~---~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~ 312 (440)
..+.|..-++.... ...+..+. ......+++. ++.+..+-...+.|...+..+++....+..-..+.....++
T Consensus 161 ~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~-- 237 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFH-- 237 (304)
T ss_dssp TTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEC--
T ss_pred CCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEEC--
Confidence 66788888875433 33332221 1222334443 23455555567788777876665555554333333223343
Q ss_pred CCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 313 KQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 313 ~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
|+..++++-+..+.|+..++... .....+. .......+++.+.++..|++....+.+..+++
T Consensus 238 -------p~~~~l~s~s~Dg~i~iWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~ 300 (304)
T 2ynn_A 238 -------PTLPIIISGSEDGTLKIWNSSTY----KVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (304)
T ss_dssp -------SSSSEEEEEETTSCEEEEETTTC----CEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEEC
T ss_pred -------CCCCEEEEEcCCCeEEEEECCCC----ceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEe
Confidence 33334444444578888887654 2222222 23355688888877666555544444444443
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.15 E-value=0.00033 Score=71.54 Aligned_cols=264 Identities=8% Similarity=-0.105 Sum_probs=148.6
Q ss_pred cce-eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEc--CCCCCcEEEEeC--CCC
Q psy14258 136 GTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKW--GATRPMLERSLL--DGT 206 (440)
Q Consensus 136 p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~--~~~~~~I~r~~~--dG~ 206 (440)
... ++.+.++.|.++ +.+.+..++|...+.+.........+++..|. ..+|+++. +....+|++.+. +|.
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCc
Confidence 445 778888888877 45666667887766654433345677888885 78888886 222247888999 777
Q ss_pred CceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeE--ecCEEEEEecC---CC
Q psy14258 207 ERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITV--FENNLFVTSWR---NQ 281 (440)
Q Consensus 207 ~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~--~~~~ly~td~~---~~ 281 (440)
.. .+.. ......+++.+.++.++++....+.+...++++...+.+..... ..+++ ++..|+++... ..
T Consensus 103 ~~-~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 103 EQ-RLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp CE-ECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS----CEEEEEEETTEEEEEEEEETTEE
T ss_pred cc-cccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCCCCe
Confidence 65 2221 12233445655676766665555656677887776666654321 34443 56677765432 25
Q ss_pred eEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCcc--EEEEEEcCCCCCCceeeeeecCCC-C
Q psy14258 282 SIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPA--IIKGLTFKRDGTTEQAIMPITDLK-R 357 (440)
Q Consensus 282 ~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~--~I~~i~~~~~~~~~~~~~~~~~~~-~ 357 (440)
.|+.++..+|+...+.........+.+. |+ ..|+.++ ..+ .|+.+++++. ... .+.+.. .
T Consensus 176 ~i~~~d~~~g~~~~l~~~~~~~~~~~~S----------pDG~~l~~~~-~~~~~~i~~~d~~~~----~~~-~~~~~~~~ 239 (582)
T 3o4h_A 176 SLFTSNLSSGGLRVFDSGEGSFSSASIS----------PGMKVTAGLE-TAREARLVTVDPRDG----SVE-DLELPSKD 239 (582)
T ss_dssp EEEEEETTTCCCEEECCSSCEEEEEEEC----------TTSCEEEEEE-CSSCEEEEEECTTTC----CEE-ECCCSCSH
T ss_pred EEEEEcCCCCCceEeecCCCccccceEC----------CCCCEEEEcc-CCCeeEEEEEcCCCC----cEE-EccCCCcC
Confidence 6888887766654332221112222222 34 3444333 334 7888888765 222 222221 2
Q ss_pred ceEEE--------EEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCC--CeEEEEE
Q psy14258 358 PSVID--------YHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGI--GTINVAK 427 (440)
Q Consensus 358 p~~l~--------~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~--~~I~~~~ 427 (440)
+.+++ +++++ ++|++-...+++....+ |...+ .....+..+++. .++.++...... ..|..++
T Consensus 240 ~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~~~~----~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-GERVE----APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp HHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-TEEEC----CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred hhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-CCeec----cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 23444 88887 78777666777766666 53211 112456778888 454444333222 3455555
Q ss_pred eCC
Q psy14258 428 ISD 430 (440)
Q Consensus 428 ~~g 430 (440)
+++
T Consensus 313 ~~~ 315 (582)
T 3o4h_A 313 SGE 315 (582)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.15 E-value=5.8e-05 Score=77.20 Aligned_cols=231 Identities=8% Similarity=-0.099 Sum_probs=132.8
Q ss_pred ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeC--CC--CcEEEEEc--c
Q psy14258 174 PRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDT--YL--DFIDRINY--D 247 (440)
Q Consensus 174 P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~--~~--~~i~~~~~--d 247 (440)
..++++.|...+|.++.... +.+....++|...+.+..........++..+. ..||+++. +. ..|+.++. +
T Consensus 24 ~~~~~~~~DG~~la~~s~~~--g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~ 100 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSE--GSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRP 100 (582)
T ss_dssp EEEEEEEETTTEEEEEEEET--TEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTST
T ss_pred hheeecCCCCCeEEEEEccC--CceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCC
Confidence 56777777656777765422 24444445766555443322234456667655 67888875 22 27788888 7
Q ss_pred CCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEe
Q psy14258 248 GTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLY 326 (440)
Q Consensus 248 G~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~ 326 (440)
|... .+.... -.....++.+++.++++....+.+...+..+|+...+..... ..+.+. |+ .+|++
T Consensus 101 g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~s----------pDG~~la~ 166 (582)
T 3o4h_A 101 GEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSD----------IRGDLIAG 166 (582)
T ss_dssp TCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEE----------EETTEEEE
T ss_pred Cccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEEC----------CCCCEEEE
Confidence 7665 332221 112345666677655554444444455666665444432211 333332 33 34443
Q ss_pred ecC---CccEEEEEEcCCCCCCceeeeeec-CCCCceEEEEEcCCCEEEEEECCCC--eEEEEecCCCCeEEEEECCCCC
Q psy14258 327 AKG---KPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSY--VIERRKMFGRGKEVVIDTGIYN 400 (440)
Q Consensus 327 ~~~---~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~--~I~r~~~~g~~~~~~~~~~~~~ 400 (440)
+.. ....|+.+++++. .. . .+. .......++|.|+++.|+.++ ..+ .|++.++++...+ ++...-..
T Consensus 167 ~~~~~~~~~~i~~~d~~~g-~~---~-~l~~~~~~~~~~~~SpDG~~l~~~~-~~~~~~i~~~d~~~~~~~-~~~~~~~~ 239 (582)
T 3o4h_A 167 LGFFGGGRVSLFTSNLSSG-GL---R-VFDSGEGSFSSASISPGMKVTAGLE-TAREARLVTVDPRDGSVE-DLELPSKD 239 (582)
T ss_dssp EEEEETTEEEEEEEETTTC-CC---E-EECCSSCEEEEEEECTTSCEEEEEE-CSSCEEEEEECTTTCCEE-ECCCSCSH
T ss_pred EEEcCCCCeEEEEEcCCCC-Cc---e-EeecCCCccccceECCCCCEEEEcc-CCCeeEEEEEcCCCCcEE-EccCCCcC
Confidence 322 1256888887765 11 1 222 223356899999999998555 344 8999999986655 43322234
Q ss_pred eeeEE--------EecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 401 VEGMA--------VDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 401 ~~glA--------vD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+.+++ +.+.+ .||++-...+++.+.++ |
T Consensus 240 ~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~-g 275 (582)
T 3o4h_A 240 FSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID-G 275 (582)
T ss_dssp HHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET-T
T ss_pred hhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE-C
Confidence 55566 88877 78888766778888888 7
No 158
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.11 E-value=0.00086 Score=62.59 Aligned_cols=276 Identities=11% Similarity=0.013 Sum_probs=148.2
Q ss_pred eEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-ee
Q psy14258 62 FGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF 140 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-av 140 (440)
|..++.++.. ..........+.++.++. ++.||+.... |++++.++...... .. ....... ++
T Consensus 42 l~~~d~~g~~-~~~~~~~~~~~~~~~~~~-~g~l~v~t~~---l~~~d~~g~~~~~~---------~~--~~~~~~~~~~ 105 (330)
T 3hxj_A 42 LYAINTDGSV-KWFFKSGEIIECRPSIGK-DGTIYFGSDK---VYAINPDGTEKWRF---------DT--KKAIVSDFTI 105 (330)
T ss_dssp TEEECTTSCE-EESSCGGGEEEECCEETT-TTEECCSSCE---EEEECCCGGGGGGS---------CC-------CCEEE
T ss_pred EEEECCCCcE-EEEEecCCCcccceEEec-CCcEEEecCc---EEEECCCCcEEEEE---------EC--CCCcccCceE
Confidence 7777733332 211122222245666664 4677776543 66655433221111 01 1111233 55
Q ss_pred eecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCcc
Q psy14258 141 PMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIV 217 (440)
Q Consensus 141 D~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~ 217 (440)
+ .++||+. +.+.+.+.+|....... ........+++|+ .|.||+.... ..|.+.+.+|....... ....
T Consensus 106 ~--~~~l~v~t~~~~l~~~d~~g~~~~~~~-~~~~~~~~~~~~~-~g~l~vgt~~---~~l~~~d~~g~~~~~~~-~~~~ 177 (330)
T 3hxj_A 106 F--EDILYVTSMDGHLYAINTDGTEKWRFK-TKKAIYATPIVSE-DGTIYVGSND---NYLYAINPDGTEKWRFK-TNDA 177 (330)
T ss_dssp E--TTEEEEECTTSEEEEECTTSCEEEEEE-CSSCCCSCCEECT-TSCEEEECTT---SEEEEECTTSCEEEEEE-CSSC
T ss_pred E--CCEEEEEecCCEEEEEcCCCCEEEEEc-CCCceeeeeEEcC-CCEEEEEcCC---CEEEEECCCCCEeEEEe-cCCC
Confidence 5 7778877 67999998865543332 2223456678887 6888887754 58999998854433222 2223
Q ss_pred CceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEE
Q psy14258 218 YPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYET 296 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~ 296 (440)
....+.+| .+++||++. +.+..++.+|......... .....+++++.+ .||++.. .+.|.++++ +|+....
T Consensus 178 ~~~~~~~d-~~g~l~v~t---~~l~~~d~~g~~~~~~~~~--~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~-~g~~~~~ 249 (330)
T 3hxj_A 178 ITSAASIG-KDGTIYFGS---DKVYAINPDGTEKWNFYAG--YWTVTRPAISEDGTIYVTSL-DGHLYAINP-DGTEKWR 249 (330)
T ss_dssp CCSCCEEC-TTCCEEEES---SSEEEECTTSCEEEEECCS--SCCCSCCEECTTSCEEEEET-TTEEEEECT-TSCEEEE
T ss_pred ceeeeEEc-CCCEEEEEe---CEEEEECCCCcEEEEEccC--CcceeceEECCCCeEEEEcC-CCeEEEECC-CCCEeEE
Confidence 34567787 577888876 7898888655544333222 234667777766 8888764 567888875 4544332
Q ss_pred EecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEEC
Q psy14258 297 IANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAEL 375 (440)
Q Consensus 297 ~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~ 375 (440)
..... .+..+.+ ..++.|+++... +.+..++.++. .. ....+. -....++..|.. +.||+..
T Consensus 250 ~~~~~~~~~~~~~----------~~~g~l~v~t~~-ggl~~~d~~g~-~~--~~~~~~-~~~~~~~~~d~~-g~l~~gt- 312 (330)
T 3hxj_A 250 FKTGKRIESSPVI----------GNTDTIYFGSYD-GHLYAINPDGT-EK--WNFETG-SWIIATPVIDEN-GTIYFGT- 312 (330)
T ss_dssp EECSSCCCSCCEE----------CTTSCEEEECTT-CEEEEECTTSC-EE--EEEECS-SCCCSCCEECTT-CCEEEEC-
T ss_pred eeCCCCccccceE----------cCCCeEEEecCC-CCEEEECCCCc-EE--EEEEcC-CccccceEEcCC-CEEEEEc-
Confidence 22111 1111211 235677777652 57888876443 11 111111 123445666654 5577764
Q ss_pred CCCeEEEEecC
Q psy14258 376 TSYVIERRKMF 386 (440)
Q Consensus 376 ~~~~I~r~~~~ 386 (440)
..+.++.....
T Consensus 313 ~~G~~~~~~~~ 323 (330)
T 3hxj_A 313 RNGKFYALFNL 323 (330)
T ss_dssp TTSCEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 45566555443
No 159
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.11 E-value=0.00021 Score=68.54 Aligned_cols=281 Identities=9% Similarity=0.021 Sum_probs=146.6
Q ss_pred EEeeecccEEEEEEcC--CCCceeEEeCCCCCcceeeccccccceeeccccc-cce-eeeecCCcEEEe---ceEEEEec
Q psy14258 86 FCTHYMEHCMIAIDLN--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTE-RFPMVTHKIVYP---EAIYFCTH 158 (440)
Q Consensus 86 i~~d~~~~~ly~~d~~--~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-p~~-avD~~~~~lY~~---~~I~~~~~ 158 (440)
+++.+.+++|.++... ...|+.+++++..... +...... ..+ ++.+.++.|+++ ..|.+.++
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-----------l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~ 109 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-----------LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDL 109 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-----------CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEET
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-----------eecCCCCccccceECCCCCEEEEEEcCCcEEEEEC
Confidence 4566777777666443 2345555554432211 1111111 223 456677778776 57999999
Q ss_pred CCceEEEEEcCCCC-CceE--E----------------EEcCCCCeEEEEEc---CCCCCcEEEEeCCCCCceeEEecCc
Q psy14258 159 YMEHCMIAIDLNLS-KPRG--I----------------ALDPTSGYMFFTKW---GATRPMLERSLLDGTERFPMVTHKI 216 (440)
Q Consensus 159 dg~~~~~~~~~~~~-~P~~--i----------------avd~~~g~lywtd~---~~~~~~I~r~~~dG~~~~~l~~~~~ 216 (440)
++...+.+...... .|.| | ++.|....+.+... ... ..|++.++++...+.+.. ..
T Consensus 110 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~-~~l~~~d~~~g~~~~~~~-~~ 187 (396)
T 3c5m_A 110 ETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPT-CRLIKVDIETGELEVIHQ-DT 187 (396)
T ss_dssp TTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCC-EEEEEEETTTCCEEEEEE-ES
T ss_pred CCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCc-ceEEEEECCCCcEEeecc-CC
Confidence 88766555442211 1221 1 11232233333321 111 578888888765555543 23
Q ss_pred cCceEEEEeC-CCCEEEEEeCCC-----CcEEEEEccCCCcEEEecCCccCceeeeeEe--cCEEEEEecC--C--CeEE
Q psy14258 217 VYPYGVTVDF-PTKHVYWVDTYL-----DFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENNLFVTSWR--N--QSII 284 (440)
Q Consensus 217 ~~P~gl~vD~-~~~~ly~~d~~~-----~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ly~td~~--~--~~i~ 284 (440)
.....+++.+ .+++|+++.... ..|..+++++.....+........+..+++. +..|+++... . ..|+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 4556788887 566677765332 4799999988776655442111234555665 3466665432 2 3388
Q ss_pred EEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCc-eeEEeec---------------CCccEEEEEEcCCCCCCcee
Q psy14258 285 RVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPS-TFLLYAK---------------GKPAIIKGLTFKRDGTTEQA 348 (440)
Q Consensus 285 ~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~---------------~~~~~I~~i~~~~~~~~~~~ 348 (440)
.++..+++...+.. ... .. ..+.+ ++ ..++++. .....|+.+++++. ...
T Consensus 268 ~~d~~~g~~~~l~~-~~~-~~-~~~s~--------~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~-~~~-- 333 (396)
T 3c5m_A 268 KANPETLENEEVMV-MPP-CS-HLMSN--------FDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAK-SAQ-- 333 (396)
T ss_dssp EECTTTCCEEEEEE-CCS-EE-EEEEC--------SSSSEEEEEECCC----------CCCCCCEEEEEETTTT-BCC--
T ss_pred EEECCCCCeEEeee-CCC-CC-CCccC--------CCCceEEEecCCcceeeccccccccCCCCcEEEEecccC-ceE--
Confidence 88876665443322 211 11 22221 02 2343321 12367888888765 211
Q ss_pred eeeecCCC----------CceEEEEEcCCCEEEEEECC--CCeEEEEecCCCCeEEE
Q psy14258 349 IMPITDLK----------RPSVIDYHEKEEYIYYAELT--SYVIERRKMFGRGKEVV 393 (440)
Q Consensus 349 ~~~~~~~~----------~p~~l~~d~~~~~vy~~d~~--~~~I~r~~~~g~~~~~~ 393 (440)
.+...... ....+++.+.+++|+++... ...|+++++++...+++
T Consensus 334 ~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~~~~~ 390 (396)
T 3c5m_A 334 KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESYKHLE 390 (396)
T ss_dssp EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTCC---
T ss_pred EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccccccc
Confidence 11111110 13456788988899988753 34689999887655443
No 160
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.10 E-value=0.0044 Score=64.56 Aligned_cols=278 Identities=9% Similarity=0.015 Sum_probs=160.4
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe--ceEEEEecC
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP--EAIYFCTHY 159 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~--~~I~~~~~d 159 (440)
+.++++++. +++.++.. +.|+..++.+..... +...-..+.. ++.+.++.|+++ +.|.+.+++
T Consensus 84 v~~~~~spd-~~~~~~~~--~~i~~~d~~~~~~~~-----------l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~ 149 (706)
T 2z3z_A 84 SFRTLDAGR-GLVVLFTQ--GGLVGFDMLARKVTY-----------LFDTNEETASLDFSPVGDRVAYVRNHNLYIARGG 149 (706)
T ss_dssp CEEEEETTT-TEEEEEET--TEEEEEETTTTEEEE-----------EECCTTCCTTCEECTTSSEEEEEETTEEEEEECB
T ss_pred ceeEEECCC-CeEEEEEC--CEEEEEECCCCceEE-----------ccCCcccccCCcCCCCCCEEEEEECCeEEEEecC
Confidence 888999998 77776643 677776665432211 1222334566 888888888777 789999988
Q ss_pred C-----ceEEEEEcCCCC--------------CceEEEEcCCCCeEEEEEcCC---------------------------
Q psy14258 160 M-----EHCMIAIDLNLS--------------KPRGIALDPTSGYMFFTKWGA--------------------------- 193 (440)
Q Consensus 160 g-----~~~~~~~~~~~~--------------~P~~iavd~~~g~lywtd~~~--------------------------- 193 (440)
+ .....+...... .+.+++..|...+|+++....
T Consensus 150 ~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g 229 (706)
T 2z3z_A 150 KLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAG 229 (706)
T ss_dssp CTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTT
T ss_pred cccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCC
Confidence 6 544443332211 258999999777788775210
Q ss_pred ---CCCcEEEEeCCCCCceeEEec--CccCceEEEEeCCCCEEEEEeCCC----CcEEEEEccCC-CcEEEecC--Cc-c
Q psy14258 194 ---TRPMLERSLLDGTERFPMVTH--KIVYPYGVTVDFPTKHVYWVDTYL----DFIDRINYDGT-DRKTIRKG--FP-V 260 (440)
Q Consensus 194 ---~~~~I~r~~~dG~~~~~l~~~--~~~~P~gl~vD~~~~~ly~~d~~~----~~i~~~~~dG~-~~~~i~~~--~~-~ 260 (440)
...+|...++++.....+... .-..+..+++.+.+.+|+++.... ..|..++..+. ....+... .. .
T Consensus 230 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~ 309 (706)
T 2z3z_A 230 TPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYV 309 (706)
T ss_dssp SCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCC
T ss_pred CCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeE
Confidence 114688888876554333221 123467889998888898864322 37888888765 44444431 10 1
Q ss_pred CceeeeeEec--C--EEEEEecC-CCeEEEEeccCCCceEEEecCCC-CeEEEEeccCCCCCCCCCc-eeEEeecCCc--
Q psy14258 261 QNLYDITVFE--N--NLFVTSWR-NQSIIRVNKFNSDDYETIANFSR-PFAIHIYHRQKQPDALKPS-TFLLYAKGKP-- 331 (440)
Q Consensus 261 ~~p~gl~~~~--~--~ly~td~~-~~~i~~~~~~~g~~~~~~~~~~~-p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~-- 331 (440)
....++++.. + .+|.++.. ...|+.++. +++....+..... ...+..+. |+ ..|+++....
T Consensus 310 ~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~-~~~~~~~l~~~~~~v~~~~~~s---------pdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 310 EPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT-TGRLIRQVTKGEWEVTNFAGFD---------PKGTRLYFESTEASP 379 (706)
T ss_dssp CCCSCCEECTTCSSEEEEEECTTSSCEEEEEET-TSCEEEECCCSSSCEEEEEEEC---------TTSSEEEEEESSSCT
T ss_pred CccCCceeecCCCCEEEEEEccCCccEEEEEEC-CCCEEEecCCCCeEEEeeeEEc---------CCCCEEEEEecCCCC
Confidence 1124456643 3 44444432 346777774 3444333332221 22222232 23 4566654433
Q ss_pred --cEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECC---CCeEEEEecCCCC
Q psy14258 332 --AIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELT---SYVIERRKMFGRG 389 (440)
Q Consensus 332 --~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~---~~~I~r~~~~g~~ 389 (440)
..|+.+++++. . ...+........+++.+.++++.++-.. ...|+..++++..
T Consensus 380 ~~~~l~~~d~~~~-~----~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGG-K----TKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCC-C----CEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCC-C----ceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 37888887665 2 1122223346688999998887766322 2569999888754
No 161
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.08 E-value=0.0084 Score=57.18 Aligned_cols=271 Identities=8% Similarity=-0.042 Sum_probs=157.6
Q ss_pred eeeecCCcEEEe----ceEEEEecCCce-------EEEEEcCCCCCceEEEEcCC----C---CeEEEEEcCCCCCcEEE
Q psy14258 139 RFPMVTHKIVYP----EAIYFCTHYMEH-------CMIAIDLNLSKPRGIALDPT----S---GYMFFTKWGATRPMLER 200 (440)
Q Consensus 139 avD~~~~~lY~~----~~I~~~~~dg~~-------~~~~~~~~~~~P~~iavd~~----~---g~lywtd~~~~~~~I~r 200 (440)
++.|..+ ++++ +.|.+.+++... ...+ .........+++.|. . .+|+..... +.|..
T Consensus 21 ~~~~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~d---g~i~i 95 (397)
T 1sq9_A 21 SVSACNS-FTVSCSGDGYLKVWDNKLLDNENPKDKSYSH-FVHKSGLHHVDVLQAIERDAFELCLVATTSFS---GDLLF 95 (397)
T ss_dssp EEEECSS-EEEEEETTSEEEEEESBCCTTCCGGGGEEEE-ECCTTCEEEEEEEEEEETTTEEEEEEEEEETT---SCEEE
T ss_pred EEEecCC-eEEEEcCCCEEEEEECCCcccccCCCcceEE-ecCCCcEEEEEEecccccCCccccEEEEEcCC---CCEEE
Confidence 4444443 4444 688888887655 3333 334456789999985 3 345444443 47777
Q ss_pred EeCCCCCc-----eeEEecC-----ccCceEEEEe----CCCCE-EEEEeCCCCcEEEEEccC-------CCcE-----E
Q psy14258 201 SLLDGTER-----FPMVTHK-----IVYPYGVTVD----FPTKH-VYWVDTYLDFIDRINYDG-------TDRK-----T 253 (440)
Q Consensus 201 ~~~dG~~~-----~~l~~~~-----~~~P~gl~vD----~~~~~-ly~~d~~~~~i~~~~~dG-------~~~~-----~ 253 (440)
.+++.... ...+... -.....+++. +.+.. |+.+. ..+.|...++.. .... .
T Consensus 96 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 96 YRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATD-VKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEE-TTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEe-CCCcEEEEeCCccccccccceeeccCcce
Confidence 77765543 2222222 2567889998 77777 66654 456777777654 3333 3
Q ss_pred Eec-----CCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEec-------CCCCeEEEEeccCCCCCCCCCc
Q psy14258 254 IRK-----GFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIAN-------FSRPFAIHIYHRQKQPDALKPS 321 (440)
Q Consensus 254 i~~-----~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~-------~~~p~~~~v~~~~~qp~~~~~~ 321 (440)
+.. ......+..+++..+.++++-..++.|...+..+++....+.. ......+.+. |+
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~----------~~ 244 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFS----------PQ 244 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEEC----------SS
T ss_pred eeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEEC----------CC
Confidence 321 1112345677776543555555678888888776655554444 2233444433 23
Q ss_pred eeEEeecCCc---cEEEEEEcCCCCCCceeeeeec--------------CCCCceEEEEEcCCCEEEEEECCCCeEEEEe
Q psy14258 322 TFLLYAKGKP---AIIKGLTFKRDGTTEQAIMPIT--------------DLKRPSVIDYHEKEEYIYYAELTSYVIERRK 384 (440)
Q Consensus 322 ~~l~~~~~~~---~~I~~i~~~~~~~~~~~~~~~~--------------~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~ 384 (440)
+.++++-+.. +.|+.+++... .....+. .-.....+++.+.++.|+.+. ..+.|+..+
T Consensus 245 ~~~l~~~~~d~~~g~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd 319 (397)
T 1sq9_A 245 GSLLAIAHDSNSFGCITLYETEFG----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWD 319 (397)
T ss_dssp TTEEEEEEEETTEEEEEEEETTTC----CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEE
T ss_pred CCEEEEEecCCCCceEEEEECCCC----cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEE
Confidence 2233333334 67888887654 1222222 223567899999877665544 678899999
Q ss_pred cCCCCeEEEEE------CC---------------CCCeeeEEEecCCC---------cEEEEeCCCCeEEEEEeCC
Q psy14258 385 MFGRGKEVVID------TG---------------IYNVEGMAVDWMAN---------NLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 385 ~~g~~~~~~~~------~~---------------~~~~~glAvD~~~~---------~lYwtd~~~~~I~~~~~~g 430 (440)
+........+. .. -..+..|++.+.++ +++.+-...+.|.+.++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 87544333333 22 46688999997663 5666666678999998865
No 162
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.08 E-value=0.0016 Score=62.67 Aligned_cols=265 Identities=7% Similarity=-0.074 Sum_probs=154.8
Q ss_pred eEEEEecCCceEE-EEE-cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC----CCceeEEecCccCceEEEEe
Q psy14258 152 AIYFCTHYMEHCM-IAI-DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG----TERFPMVTHKIVYPYGVTVD 225 (440)
Q Consensus 152 ~I~~~~~dg~~~~-~~~-~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG----~~~~~l~~~~~~~P~gl~vD 225 (440)
.|.+.+++..... .+. .........+++.|...+|+..... +.|...+++. ......+...-.....+++.
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 122 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN---GSLELYSTNEANNAINSMARFSNHSSSVKTVKFN 122 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS---SCEEEECCSSTTSCCCEEEECCCSSSCCCEEEEC
T ss_pred eEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC---CeEEEeecccccccccchhhccCCccceEEEEEc
Confidence 5777777654321 111 1123567899999965566555543 5788888875 21222222223456789998
Q ss_pred CCCCEEEEEeCCCCcEEEEEccCCC------cEEEe-c-CCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceE
Q psy14258 226 FPTKHVYWVDTYLDFIDRINYDGTD------RKTIR-K-GFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 226 ~~~~~ly~~d~~~~~i~~~~~dG~~------~~~i~-~-~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+.+++++.+-...+.|...++.... ..... . .........+++..+ .++.+-...+.|...+..+++...
T Consensus 123 ~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 123 AKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVI 202 (416)
T ss_dssp SSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcce
Confidence 7745555555566788888876543 11111 1 111234567777653 666776677888888887766555
Q ss_pred EEecC------C-CCeEEEEeccCCCCCCCCCc-eeEEeecCCcc---EEEEEEcCCCCCCceeeeeecCCCCceEEEEE
Q psy14258 296 TIANF------S-RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPA---IIKGLTFKRDGTTEQAIMPITDLKRPSVIDYH 364 (440)
Q Consensus 296 ~~~~~------~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~---~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d 364 (440)
.+... . ....+.+. |+ ..++++-+..+ .|+..++....... .......-....++++.
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~----------~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~-~~~~~~~~~~v~~~~~s 271 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWH----------PKNSTRVATATGSDNDPSILIWDLRNANTPL-QTLNQGHQKGILSLDWC 271 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEEC----------SSCTTEEEEEECCSSSCCCCEEETTSTTSCS-BCCCSCCSSCEEEEEEC
T ss_pred EEeccccccccCCceEEEEEC----------CCCCCEEEEEECCCCCceEEEEeCCCCCCCc-EEeecCccCceeEEEeC
Confidence 44322 2 23344333 23 22333333334 78888876541110 11110122356789999
Q ss_pred cCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 365 EKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 365 ~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+.++.++++-...++|+..++........+...-..+..+++.+.++.++.+-...++|.+.++..
T Consensus 272 ~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 272 HQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQN 337 (416)
T ss_dssp SSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCC
T ss_pred CCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccC
Confidence 844445566557889999888754443334444467889999987767888877789999999876
No 163
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.05 E-value=0.0042 Score=59.11 Aligned_cols=222 Identities=8% Similarity=-0.079 Sum_probs=122.6
Q ss_pred ceEEEEecCCceEEEE----EcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeC
Q psy14258 151 EAIYFCTHYMEHCMIA----IDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDF 226 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~----~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~ 226 (440)
+.|.+-++.......+ .........++++.|...+|.-.... +.|...++........+...-.....+++.+
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---g~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~ 191 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---FSVKVWDLSQKAVLKSYNAHSSEVNCVAACP 191 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCCCCCEEEEEEcc
Confidence 5666666543322111 11123457899999954445444433 5788888765433333333344567888887
Q ss_pred CCCEEEEEeCCCCcEEEEEccCCCcE-EEecCCccCceeeeeEe--cCEEEEEecCCCeEEEEeccCCCceEEEecCCC-
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDGTDRK-TIRKGFPVQNLYDITVF--ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSR- 302 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG~~~~-~i~~~~~~~~p~gl~~~--~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~- 302 (440)
.++.++.+-...+.|...++...... .+.....-..+..+++. ++.++.+-..++.|...+..+++....+.....
T Consensus 192 ~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~ 271 (357)
T 4g56_B 192 GKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQN 271 (357)
T ss_dssp TCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSC
T ss_pred CCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecccee
Confidence 77667666666677877776543322 22111112345677775 345666655678888888877777666554333
Q ss_pred CeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEE
Q psy14258 303 PFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIER 382 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r 382 (440)
...+++. |. +..++++-+..+.|+..+++.. +....+..-....+|+|.|.++.++.+-...++|+.
T Consensus 272 v~~l~~s-p~--------~~~~lasgs~D~~i~iwd~~~~----~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 272 ITGLAYS-YH--------SSPFLASISEDCTVAVLDADFS----EVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp EEEEEEC-SS--------SSCCEEEEETTSCEEEECTTSC----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred EEEEEEc-CC--------CCCEEEEEeCCCEEEEEECCCC----cEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence 3445433 11 1223333333477888877654 333333333456799999865556666667888888
Q ss_pred EecCCC
Q psy14258 383 RKMFGR 388 (440)
Q Consensus 383 ~~~~g~ 388 (440)
-++...
T Consensus 339 W~~~~~ 344 (357)
T 4g56_B 339 HHLPSE 344 (357)
T ss_dssp EECC--
T ss_pred EECCCC
Confidence 777543
No 164
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.04 E-value=0.031 Score=62.24 Aligned_cols=341 Identities=7% Similarity=-0.072 Sum_probs=184.4
Q ss_pred eEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-ee
Q psy14258 62 FGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF 140 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-av 140 (440)
|...++........+..+...+.+++|++.++.|..+.. .+.|...++..... + ..+......... ++
T Consensus 639 i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-d~~v~vwd~~~~~~--~--------~~~~~~~~~v~~~~~ 707 (1249)
T 3sfz_A 639 LQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-DKKVKIWDSATGKL--V--------HTYDEHSEQVNCCHF 707 (1249)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-TSEEEEEETTTCCE--E--------EEEECCSSCEEEEEE
T ss_pred EEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-CCeEEEEECCCCce--E--------EEEcCCCCcEEEEEE
Confidence 777777655443333333334999999998776665554 46666655542211 1 012222223444 55
Q ss_pred eecCCcEE-Ee----ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec-
Q psy14258 141 PMVTHKIV-YP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH- 214 (440)
Q Consensus 141 D~~~~~lY-~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~- 214 (440)
.+.++..+ .+ +.|.+.+++...+...+........++++.|....|...... +.|...++........+..
T Consensus 708 ~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d---g~v~vwd~~~~~~~~~~~~~ 784 (1249)
T 3sfz_A 708 TNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD---GTLRLWDVRSANERKSINVK 784 (1249)
T ss_dssp CSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS---SEEEEEEGGGTEEEEEEECC
T ss_pred ecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC---CeEEEEeCCCCcccceeccc
Confidence 44334333 33 678888988766655555555678899999955555444433 4777777754332222111
Q ss_pred C------------ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCC
Q psy14258 215 K------------IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQ 281 (440)
Q Consensus 215 ~------------~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~ 281 (440)
. ...+..+++.+.+..+..+. .+.+...+....................+++..+ .+..+-...+
T Consensus 785 ~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 862 (1249)
T 3sfz_A 785 RFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA--KNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY 862 (1249)
T ss_dssp CCC--------CCCCCBCCCCBCTTSSEEEEEE--TTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS
T ss_pred ccccccCCccccccceEEEEEECCCCCEEEEEc--CCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC
Confidence 0 11345677777777777765 4677777775444332222111334456666543 4444445567
Q ss_pred eEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCC----------------
Q psy14258 282 SIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGT---------------- 344 (440)
Q Consensus 282 ~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~---------------- 344 (440)
.|...+..++.....+..-. ....+.+. |++..+++-+..+.|+..++.....
T Consensus 863 ~v~vwd~~~~~~~~~~~~h~~~v~~v~~s----------pdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~ 932 (1249)
T 3sfz_A 863 CVELWNIDSRLKVADCRGHLSWVHGVMFS----------PDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQE 932 (1249)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEET
T ss_pred eEEEEEcCCCceeeecCCCccceEEEEEC----------CCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcC
Confidence 77777776655444443322 23344333 2222222222235555554332100
Q ss_pred -----------Cc-------eeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEE
Q psy14258 345 -----------TE-------QAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAV 406 (440)
Q Consensus 345 -----------~~-------~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAv 406 (440)
.. ........-.....+++.+.++.+...+ ..+.|+..++............-..+..+++
T Consensus 933 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~-~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~ 1011 (1249)
T 3sfz_A 933 NETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGD-EDGAIKIIELPNNRVFSSGVGHKKAVRHIQF 1011 (1249)
T ss_dssp TEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEE-TTSCCEEEETTTTSCEEECCCCSSCCCCEEE
T ss_pred CCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEc-CCCCEEEEEcCCCceeeecccCCCceEEEEE
Confidence 00 0000001112456888999888776665 5778888888754433333334456788999
Q ss_pred ecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 407 DWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 407 D~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.+.++.|..+ ...+.|.+.++..
T Consensus 1012 s~dg~~l~s~-~~dg~i~vwd~~~ 1034 (1249)
T 3sfz_A 1012 TADGKTLISS-SEDSVIQVWNWQT 1034 (1249)
T ss_dssp CSSSSCEEEE-CSSSBEEEEETTT
T ss_pred CCCCCEEEEE-cCCCEEEEEECCC
Confidence 8877666554 4467888888765
No 165
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=97.96 E-value=0.0021 Score=61.54 Aligned_cols=165 Identities=9% Similarity=-0.029 Sum_probs=105.5
Q ss_pred eEEEEEee-e------cccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccceeeeecCCcEEEeceEE
Q psy14258 82 EAIYFCTH-Y------MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPEAIY 154 (440)
Q Consensus 82 ~~~~i~~d-~------~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~avD~~~~~lY~~~~I~ 154 (440)
....+.+| . .+..+|++|.....|..+++.....-.+ + ...-.|+. .. .|
T Consensus 153 ~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv----------~-~~~~~pd~-----~~-~~------ 209 (381)
T 3q6k_A 153 YFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNV----------T-HPTFKAER-----PT-KF------ 209 (381)
T ss_dssp GEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEE----------E-CGGGSCCS-----CE-EE------
T ss_pred ccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEE----------c-cCCCcccc-----Cc-ce------
Confidence 36777777 2 2688999999888887777754331111 1 11113321 00 11
Q ss_pred EEecCCceEEEEEcCCCCCceEEEEcCC----CCeEEEEEcCCCCCcEEEEeC----CCC--CceeEEecC--ccCceEE
Q psy14258 155 FCTHYMEHCMIAIDLNLSKPRGIALDPT----SGYMFFTKWGATRPMLERSLL----DGT--ERFPMVTHK--IVYPYGV 222 (440)
Q Consensus 155 ~~~~dg~~~~~~~~~~~~~P~~iavd~~----~g~lywtd~~~~~~~I~r~~~----dG~--~~~~l~~~~--~~~P~gl 222 (440)
..+|.... + ....-|||+.|. .+.|||.-..+ .++++... +.+ ...+.+... .....++
T Consensus 210 --~i~G~~~~-~----~~Gi~gIaLsp~~~~~~~~LYf~plss--~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~ 280 (381)
T 3q6k_A 210 --DYGGKEYE-F----KAGIFGITLGDRDSEGNRPAYYLAGSA--IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIAL 280 (381)
T ss_dssp --EETTEEEE-E----CCCEEEEEECCCCTTSCCEEEEEESSC--SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEE
T ss_pred --EECCEEeE-e----ccCceEEEecCCcCCCCeEEEEEECCC--CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceE
Confidence 12222211 1 134669999997 68999999876 47888763 222 112222222 2345578
Q ss_pred EEeCCCCEEEEEeCCCCcEEEEEccC-----CCcEEEecCCccCceeeeeEec-CEEEEEec
Q psy14258 223 TVDFPTKHVYWVDTYLDFIDRINYDG-----TDRKTIRKGFPVQNLYDITVFE-NNLFVTSW 278 (440)
Q Consensus 223 ~vD~~~~~ly~~d~~~~~i~~~~~dG-----~~~~~i~~~~~~~~p~gl~~~~-~~ly~td~ 278 (440)
++|..++.||+++...+.|.+.+.++ .+..++.....+..|-++++.. ++||++..
T Consensus 281 ~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 281 AYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 89878999999999999999999887 4567777755688999999974 48888763
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=97.95 E-value=0.0013 Score=68.04 Aligned_cols=229 Identities=6% Similarity=-0.116 Sum_probs=132.7
Q ss_pred EEEEeecccceeeeEEEecC--C-Cce-eeeeec---ccceEEEEEeeecccEEEEEEcCC---------CCceeEEeCC
Q psy14258 49 HLYETIEAFWEECFGPMDIE--E-WDE-GLSFLT---FAQEAIYFCTHYMEHCMIAIDLNL---------SKPRGIALDP 112 (440)
Q Consensus 49 ll~s~~~~~~~~~I~~~~l~--~-~~~-~~~~~~---~~~~~~~i~~d~~~~~ly~~d~~~---------~~I~~~~~~~ 112 (440)
|+++.... ..|..++++ + ... .+.... ....+.++++++.+++|+++.... ..|+..++++
T Consensus 94 la~~~~~~---~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 94 LVFTHFGD---QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp EEEEBTTT---CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred EEEEECCC---CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 56665422 228888887 3 333 232210 122378899999999998886541 3677777765
Q ss_pred ------CCCcceeeccccccceee-ccccccce-eeeecCCcEEEe---c--------eEEEEecCC-c---eEEEEEcC
Q psy14258 113 ------TSGYMFFTKWGATRPMLE-RSLLDGTE-RFPMVTHKIVYP---E--------AIYFCTHYM-E---HCMIAIDL 169 (440)
Q Consensus 113 ------~~~~~~~~~~~~~~v~~~-~~~~~p~~-avD~~~~~lY~~---~--------~I~~~~~dg-~---~~~~~~~~ 169 (440)
..... +. .+-....+ ++.+.++.|+++ . .|.+.++++ . ..+.+...
T Consensus 171 ~~~~~~~~~~~-----------l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 171 SAAADRSAVRE-----------LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp TTTTCGGGSEE-----------SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CccccCCceeE-----------EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 22211 22 22234556 788888888887 2 588899984 3 44445443
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC--ccC------ceEEEEeCCCCEEEEEeCCCCcE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK--IVY------PYGVTVDFPTKHVYWVDTYLDFI 241 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~--~~~------P~gl~vD~~~~~ly~~d~~~~~i 241 (440)
....+..++..|. |.||++.......+|++.++++...+.+.... ... ...+++.+.+..+|.+.....+|
T Consensus 240 ~~~~~~~~~~spd-g~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~l 318 (662)
T 3azo_A 240 PEEAIAQAEWAPD-GSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAVL 318 (662)
T ss_dssp TTBCEEEEEECTT-SCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCEE
T ss_pred CCceEcceEECCC-CeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEcCccEE
Confidence 3467888999885 55666653322248999998665544443321 111 24566654444444443334477
Q ss_pred EEEEccCCCcEEEecCCccCceeee-eEecCEEEEEecCC---CeEEEEeccCCCce
Q psy14258 242 DRINYDGTDRKTIRKGFPVQNLYDI-TVFENNLFVTSWRN---QSIIRVNKFNSDDY 294 (440)
Q Consensus 242 ~~~~~dG~~~~~i~~~~~~~~p~gl-~~~~~~ly~td~~~---~~i~~~~~~~g~~~ 294 (440)
+.++.++...+.+... .....++ +.+++.++++-... ..|+.++..+++..
T Consensus 319 ~~~d~~~~~~~~l~~~--~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 373 (662)
T 3azo_A 319 GILDPESGELVDAAGP--WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRAR 373 (662)
T ss_dssp EEEETTTTEEEECCSS--CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEE
T ss_pred EEEECCCCcEEEecCC--CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceE
Confidence 8888887665555332 2234456 67777666654332 36888877655433
No 167
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.93 E-value=0.013 Score=54.15 Aligned_cols=281 Identities=9% Similarity=0.002 Sum_probs=169.3
Q ss_pred ccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 133 LLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 133 ~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
-..+.+ ++.+.+..|.-+ +.|.+-++........+.........+++.|...+|+-.... +.|...++.....
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD---FRIRVFNYNTGEK 89 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT---SEEEEEETTTCCE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC---CEEEEEECCCCcE
Confidence 345666 777776655544 688888887655443334344556788888865555555443 5888888865443
Q ss_pred eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC-CcEEEecCCccCceeeeeEec--CEEEEEecCCCeEEE
Q psy14258 209 FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT-DRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIR 285 (440)
Q Consensus 209 ~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~-~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~ 285 (440)
...+...-.....+++.+.+..|+-+ ...+.|..-++... .......+. ......+++.. +.++.+-...+.|..
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~~l~sg-s~D~~v~lWd~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKPYVLSG-SDDLTVKLWNWENNWALEQTFEGH-EHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEE-ETTSCEEEEEGGGTTEEEEEECCC-CSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred EEEEeCCCCcEEEEEEcCCCCEEEEE-CCCCeEEEEECCCCcchhhhhccc-CCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 33333333456789998776666544 45677888887644 233333321 23456777763 356666666788877
Q ss_pred EeccCCCceEEEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEE
Q psy14258 286 VNKFNSDDYETIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDY 363 (440)
Q Consensus 286 ~~~~~g~~~~~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~ 363 (440)
.+..++.....+.. ...+.....+.+. +++.++++-+..+.|+..++... .....+.+ ......++|
T Consensus 168 wd~~~~~~~~~~~~~~~~~v~~~~~~~~-------~~~~~l~s~s~D~~i~iWd~~~~----~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 168 WSLGQSTPNFTLTTGQERGVNYVDYYPL-------PDKPYMITASDDLTIKIWDYQTK----SCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp EETTCSSCSEEEECCCTTCEEEEEECCS-------TTCCEEEEEETTSEEEEEETTTT----EEEEEEECCSSCEEEEEE
T ss_pred EECCCCCccceeccCCcCcEEEEEEEEc-------CCCCEEEEEcCCCeEEEEeCCCC----ccceeeCCCCCCEEEEEE
Confidence 77765554443322 2222222222211 23323444344578888888655 22333333 234568999
Q ss_pred EcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 364 HEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 364 d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.+.+..| .+-...++|..-++........+..+...+..+|+.+.++.+|.+-...+.+.++++..
T Consensus 237 ~p~~~~l-~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~ 302 (304)
T 2ynn_A 237 HPTLPII-ISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGN 302 (304)
T ss_dssp CSSSSEE-EEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEEECC-
T ss_pred CCCCCEE-EEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEEEecc
Confidence 9987744 55557889988888765544444556677888999888877766666667788877764
No 168
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.93 E-value=0.0037 Score=69.65 Aligned_cols=343 Identities=8% Similarity=-0.047 Sum_probs=187.5
Q ss_pred eEEEEeecccceeeeEEEecCCCceeeeee-cccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeecccccc
Q psy14258 48 THLYETIEAFWEECFGPMDIEEWDEGLSFL-TFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATR 126 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~~~~~~~~~-~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~ 126 (440)
.++.+.... |...++........+. .....+..+++++.++.+..+.. .+.|...++.... .+
T Consensus 812 ~l~~~~~~~-----v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-dg~v~vwd~~~~~--~~-------- 875 (1249)
T 3sfz_A 812 KIIVAAKNK-----VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS-QYCVELWNIDSRL--KV-------- 875 (1249)
T ss_dssp EEEEEETTE-----EEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS-SSCEEEEETTTTE--EE--------
T ss_pred EEEEEcCCc-----EEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC-CCeEEEEEcCCCc--ee--------
Confidence 344444455 7777766444331111 12223788899988776665554 4566555544221 10
Q ss_pred ceeeccccccce-eeeecCCcEEEe---ceEEEEecCCc------------------------------eEEEEE-----
Q psy14258 127 PMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYME------------------------------HCMIAI----- 167 (440)
Q Consensus 127 v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~------------------------------~~~~~~----- 167 (440)
..+......+.+ ++.+.+..|+.+ +.|.+.++... ......
T Consensus 876 ~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 876 ADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred eecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 112222334555 666655544433 45555443210 000000
Q ss_pred --cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEE
Q psy14258 168 --DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRIN 245 (440)
Q Consensus 168 --~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~ 245 (440)
.........+++.|...++...... +.|...++............-.....+++.+.+..|..+ ...+.|...+
T Consensus 956 ~~~~~~~~i~~~~~sp~g~~l~~g~~~---g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~-~~dg~i~vwd 1031 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCLSPHLEYVAFGDED---GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISS-SEDSVIQVWN 1031 (1249)
T ss_dssp EEEECCSCEEEEEECTTSSEEEEEETT---SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEE-CSSSBEEEEE
T ss_pred EEEcccCcEEEEEEcCCCCEEEEEcCC---CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEE-cCCCEEEEEE
Confidence 0012356788899866666666544 578888876544333333333456788998776666655 4567888888
Q ss_pred ccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeE
Q psy14258 246 YDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFL 324 (440)
Q Consensus 246 ~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l 324 (440)
+.......+... ......+++..+..+++-...+.|...+..+++....+..-. ....+.+. |++.+
T Consensus 1032 ~~~~~~~~~~~~--~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s----------~d~~~ 1099 (1249)
T 3sfz_A 1032 WQTGDYVFLQAH--QETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAIS----------SDATK 1099 (1249)
T ss_dssp TTTTEEECCBCC--SSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEEC----------SSSSS
T ss_pred CCCCceEEEecC--CCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEEC----------CCCCE
Confidence 765443322211 234566777666445555567888888887777666554322 34444443 23223
Q ss_pred EeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCe-EEE--------E
Q psy14258 325 LYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGK-EVV--------I 394 (440)
Q Consensus 325 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~-~~~--------~ 394 (440)
+++-+..+.|+..+++.. . ....+.+ -....+++|.+.+..+..++ ..+.|+..++..... ..+ .
T Consensus 1100 l~s~s~d~~v~iwd~~~~-~---~~~~l~~h~~~v~~~~~s~dg~~lat~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 1174 (1249)
T 3sfz_A 1100 FSSTSADKTAKIWSFDLL-S---PLHELKGHNGCVRCSAFSLDGILLATGD-DNGEIRIWNVSDGQLLHSCAPISVEEGT 1174 (1249)
T ss_dssp CEEECCSSCCCEECSSSS-S---CSBCCCCCSSCEEEEEECSSSSEEEEEE-TTSCCCEEESSSSCCCCCCCCCC-----
T ss_pred EEEEcCCCcEEEEECCCc-c---eeeeeccCCCcEEEEEECCCCCEEEEEe-CCCEEEEEECCCCceEEEeccccccccc
Confidence 333333467777776554 1 1111222 22456899999887666554 567787777764221 111 1
Q ss_pred ECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 395 DTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 395 ~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
...-..+.++++.+.++.|..++ +.|.+.++..
T Consensus 1175 ~~~~~~v~~l~fs~dg~~l~s~~---g~v~vwd~~~ 1207 (1249)
T 3sfz_A 1175 ATHGGWVTDVCFSPDSKTLVSAG---GYLKWWNVAT 1207 (1249)
T ss_dssp --CCSCCCEEEECTTSSCEEEES---SSEEEBCSSS
T ss_pred cccCceEEEEEECCCCCEEEECC---CeEEEEECCC
Confidence 12335688999999888887765 6888888654
No 169
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.91 E-value=0.019 Score=58.09 Aligned_cols=274 Identities=10% Similarity=-0.040 Sum_probs=155.9
Q ss_pred ccccce-eeeecCCcEEEe--ceEEEEecCCc----eEEEEEcCCCCC-ceEEEEcC--CCCeEEEEEcCCCCCcEEEEe
Q psy14258 133 LLDGTE-RFPMVTHKIVYP--EAIYFCTHYME----HCMIAIDLNLSK-PRGIALDP--TSGYMFFTKWGATRPMLERSL 202 (440)
Q Consensus 133 ~~~p~~-avD~~~~~lY~~--~~I~~~~~dg~----~~~~~~~~~~~~-P~~iavd~--~~g~lywtd~~~~~~~I~r~~ 202 (440)
-..+.. ++.+.++.|.++ +.|.+.+++.. .....+...... ...+++.| ...+|...... +.|...+
T Consensus 18 ~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~d---g~v~vw~ 94 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDES---GKVIVWG 94 (615)
T ss_dssp TTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETT---SEEEEEE
T ss_pred cCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCC---CEEEEEe
Confidence 345677 888888877766 78888888754 333334444456 89999999 66666665544 5777777
Q ss_pred CCCC--------CceeEEecCccCceEEEEeCCCCEEEEEeCCC---CcEEEEEccCCCcEEEecCCccCceeeeeEecC
Q psy14258 203 LDGT--------ERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL---DFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN 271 (440)
Q Consensus 203 ~dG~--------~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~---~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~ 271 (440)
++.. .....+...-.....+++.+.+..|+.+.... ..|...+ .........+ .......+++..+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~-~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSG-HSQRINACHLKQS 171 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCS-CSSCEEEEEECSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeec-CCccEEEEEECCC
Confidence 7321 11111222234578899998888888776543 2444333 2222222222 1334567777655
Q ss_pred --EEEEEecCCCeEEEEeccCCCceEEEecCCC----CeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCC
Q psy14258 272 --NLFVTSWRNQSIIRVNKFNSDDYETIANFSR----PFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGT 344 (440)
Q Consensus 272 --~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~----p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~ 344 (440)
.++.+-...+.|...+..+++....+..-.. ...+.+. |+ +.++++-+..+.|+..++...
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~~l~~~~~dg~i~vwd~~~~-- 239 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS----------PDSGEFVITVGSDRKISCFDGKSG-- 239 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC----------STTCCEEEEEETTCCEEEEETTTC--
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC----------CCCCCEEEEEeCCCeEEEEECCCC--
Confidence 3666666678888777665555444433222 2334333 33 333443333478888887654
Q ss_pred Cceeeeee-----cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECC----CCCeeeEEEecCCCcEEE
Q psy14258 345 TEQAIMPI-----TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTG----IYNVEGMAVDWMANNLYW 415 (440)
Q Consensus 345 ~~~~~~~~-----~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~----~~~~~glAvD~~~~~lYw 415 (440)
.....+ ..-....++++. .+..+ ++-...+.|...++............ -..+..+++. .++...
T Consensus 240 --~~~~~~~~~~~~~~~~v~~~~~~-~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~ 313 (615)
T 1pgu_A 240 --EFLKYIEDDQEPVQGGIFALSWL-DSQKF-ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT--GNGRII 313 (615)
T ss_dssp --CEEEECCBTTBCCCSCEEEEEES-SSSEE-EEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE--ETTEEE
T ss_pred --CEeEEecccccccCCceEEEEEc-CCCEE-EEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC--CCCeEE
Confidence 222223 223355689998 55555 45446788988888743332222322 1344556664 334444
Q ss_pred EeCCCCeEEEEEeCC
Q psy14258 416 TDAGIGTINVAKISD 430 (440)
Q Consensus 416 td~~~~~I~~~~~~g 430 (440)
+-...+.|.+.++..
T Consensus 314 ~~~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 314 SLSLDGTLNFYELGH 328 (615)
T ss_dssp EEETTSCEEEEETTE
T ss_pred EEECCCCEEEEECCC
Confidence 545567888888764
No 170
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.022 Score=55.69 Aligned_cols=237 Identities=14% Similarity=0.051 Sum_probs=137.0
Q ss_pred CceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC--CCCceeEEe--cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC
Q psy14258 173 KPRGIALDPTSGYMFFTKWGATRPMLERSLLD--GTERFPMVT--HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG 248 (440)
Q Consensus 173 ~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d--G~~~~~l~~--~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG 248 (440)
...++++.|...+|+.+-... +.|...+++ +......+. ..-..+..+++++.+..|+.++. .+.|..+++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSD--KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-FGDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGG--TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET-TSEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCC--CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC-CCcEEEEecCC
Confidence 478999999766666665333 467777766 433333332 22346789999988888888864 67788888644
Q ss_pred CCcE-----EEecCCccCceeeeeEecC----EEEEEecCCCeEEEEeccCCCceEEEe-cC-CCCeEEEEeccCCCCCC
Q psy14258 249 TDRK-----TIRKGFPVQNLYDITVFEN----NLFVTSWRNQSIIRVNKFNSDDYETIA-NF-SRPFAIHIYHRQKQPDA 317 (440)
Q Consensus 249 ~~~~-----~i~~~~~~~~p~gl~~~~~----~ly~td~~~~~i~~~~~~~g~~~~~~~-~~-~~p~~~~v~~~~~qp~~ 317 (440)
.... .+... ......+++..+ .++++-...+.|...+..+++....+. .- ..+..+.+. .
T Consensus 181 ~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s--d----- 251 (450)
T 2vdu_B 181 IPEEKFTQEPILGH--VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG--K----- 251 (450)
T ss_dssp CCCSSCCCCCSEEC--SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC--S-----
T ss_pred cccccccceeeecc--cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC--C-----
Confidence 3221 11111 234567777653 344444456778777776666555432 22 233444433 1
Q ss_pred CCCceeEEeecCCccEEEEEEcCCCCCCceeeeee------------------------cCCCCceEEEEEcCCCEEEEE
Q psy14258 318 LKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI------------------------TDLKRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 318 ~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~------------------------~~~~~p~~l~~d~~~~~vy~~ 373 (440)
..+|+.+ +..+.|+..++... ... ..+.. ..-....++++.+.++.+|.+
T Consensus 252 ---~~~l~s~-~~d~~v~vwd~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~ 325 (450)
T 2vdu_B 252 ---DYLLLSA-GGDDKIFAWDWKTG-KNL-STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF 325 (450)
T ss_dssp ---TTEEEEE-ESSSEEEEEETTTC-CEE-EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEE
T ss_pred ---CCEEEEE-eCCCeEEEEECCCC-cEe-eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE
Confidence 1234433 33477887777654 110 01111 001234588999989999988
Q ss_pred ECCCCeEEEEec--CCC-CeEE--EEECCCCCeeeEEEecCCCcEEEEeCC-------CCeEEEEEeCC
Q psy14258 374 ELTSYVIERRKM--FGR-GKEV--VIDTGIYNVEGMAVDWMANNLYWTDAG-------IGTINVAKISD 430 (440)
Q Consensus 374 d~~~~~I~r~~~--~g~-~~~~--~~~~~~~~~~glAvD~~~~~lYwtd~~-------~~~I~~~~~~g 430 (440)
....+.|+..++ ... ..+. .+... ..+..+++++ +.++.+-.. .+.|+++.++.
T Consensus 326 ~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp ETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEc
Confidence 867888888888 322 1121 22333 6789999986 446666322 34467776553
No 171
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.87 E-value=0.024 Score=55.22 Aligned_cols=245 Identities=10% Similarity=0.033 Sum_probs=150.7
Q ss_pred CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC----------CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCc
Q psy14258 171 LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG----------TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDF 240 (440)
Q Consensus 171 ~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG----------~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~ 240 (440)
...+..|++.|.++.++.+-... +.|...+++. ......+...-..+.+|++++.+..++.+-...+.
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~d--g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~ 205 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPS--SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHT 205 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSS--SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSC
T ss_pred CCcEEEEEECCCCCcEEEEECCC--CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCe
Confidence 35688999999656666665433 5787777753 11111222223456889998777635555556778
Q ss_pred EEEEEccCCCc--EE-----EecCCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCC---ceEEEecCC-CCeEEE
Q psy14258 241 IDRINYDGTDR--KT-----IRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSD---DYETIANFS-RPFAIH 307 (440)
Q Consensus 241 i~~~~~dG~~~--~~-----i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~---~~~~~~~~~-~p~~~~ 307 (440)
|...++..... .. ...+ .......+++.. +.++.+....+.|...+..++. ....+..-. .+..+.
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred EEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 88888764211 11 1111 123466777764 4788887778888888877653 333333222 344444
Q ss_pred EeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 308 IYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 308 v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+. |+ .+++++-+..+.|...++...... -..+. ..-.....+++.+.++.++.+....++|...++.
T Consensus 285 ~~----------p~~~~~l~tg~~dg~v~vwd~~~~~~~-~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 285 FN----------PYSEFILATGSADKTVALWDLRNLKLK-LHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EC----------SSCTTEEEEEETTSEEEEEETTCTTSC-SEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGG
T ss_pred eC----------CCCCCEEEEEeCCCeEEEEeCCCCCCC-eEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCC
Confidence 33 22 345555455588999998764111 11111 1233567899999888888888788888888876
Q ss_pred CCC-------------eEEEEEC-CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 387 GRG-------------KEVVIDT-GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 387 g~~-------------~~~~~~~-~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
... ....... .-..+..+++.+.+..++.+....+.|.+.+++.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 411 1222222 2346899999987776888888889999999875
No 172
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.86 E-value=0.017 Score=53.24 Aligned_cols=274 Identities=7% Similarity=-0.019 Sum_probs=151.2
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.++++++.++.|.-... .+.|+...+...... ..+......... ++.+.++.|+.+ +.|.+.+
T Consensus 25 ~v~~~~~s~~~~~l~s~~~-dg~i~iw~~~~~~~~----------~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSA-DKLIKIWGAYDGKFE----------KTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp CEEEEEECTTSSEEEEEET-TSCEEEEETTTCCEE----------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEECCCCCEEEEeeC-CCeEEEEeCCCcccc----------hhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 4899999988766655543 456655444322111 012222334555 666666555544 6888888
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
+....+...+.........+++.|...+|+..... +.|...++........+...-.....+++.+.+..|+.+. .
T Consensus 94 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~ 169 (312)
T 4ery_A 94 VSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD---ESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSS-Y 169 (312)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT---SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-T
T ss_pred CCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEe-C
Confidence 87655544444455667899999965555555544 5788888865443333332233467889987666666554 5
Q ss_pred CCcEEEEEccCCC-cEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCC-CeEEE-EeccCC
Q psy14258 238 LDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSR-PFAIH-IYHRQK 313 (440)
Q Consensus 238 ~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~-p~~~~-v~~~~~ 313 (440)
.+.|...++.... ...+... .......+++..+ ...++-...+.|...+..+++....+..... ...+. .+.
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--- 245 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS--- 245 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE---
T ss_pred CCcEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE---
Confidence 6678888875433 3333222 1222345666543 3344444567787777766654444332211 11110 110
Q ss_pred CCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEEC-CCCeEEEE
Q psy14258 314 QPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAEL-TSYVIERR 383 (440)
Q Consensus 314 qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~-~~~~I~r~ 383 (440)
.+++.++++-+..+.|+..++... .....+.+ -.....+++++.+..+.-+.. ..++|..-
T Consensus 246 -----~~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W 308 (312)
T 4ery_A 246 -----VTGGKWIVSGSEDNLVYIWNLQTK----EIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLW 308 (312)
T ss_dssp -----CSSSCEEEECCTTSCEEEEETTTC----CEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEE
T ss_pred -----eCCCcEEEEECCCCEEEEEECCCc----hhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEe
Confidence 123334444444578888887655 22333332 234568999998887766543 34555443
No 173
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.85 E-value=0.024 Score=54.81 Aligned_cols=271 Identities=6% Similarity=-0.018 Sum_probs=149.5
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|++... +..+-...+.|...++....... .+...-..+.. ++.+.++.|.-+ +.|.+.+
T Consensus 110 ~V~~~~~~p~~~-~l~s~s~Dg~i~vwd~~~~~~~~----------~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd 178 (410)
T 1vyh_C 110 PVTRVIFHPVFS-VMVSASEDATIKVWDYETGDFER----------TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWD 178 (410)
T ss_dssp CEEEEEECSSSS-EEEEEESSSCEEEEETTTCCCCE----------EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEE
T ss_pred cEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEE----------EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEe
Confidence 489999998755 44555555777766654332111 12222334556 776655533333 6788888
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
+.+..+...+........++++.|...+|+-.... +.|...++........+...-.....+.+.+.+..|. +-..
T Consensus 179 ~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D---~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~-s~s~ 254 (410)
T 1vyh_C 179 FQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRD---KTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA-SCSN 254 (410)
T ss_dssp TTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE-EEET
T ss_pred CCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCC---CeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE-EEcC
Confidence 87765543333344568899999954455444433 5788888864443333333334566788875554444 4445
Q ss_pred CCcEEEEEccCCCcEEEecCCccCceeeeeEec---------------------CEEEEEecCCCeEEEEeccCCCceEE
Q psy14258 238 LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE---------------------NNLFVTSWRNQSIIRVNKFNSDDYET 296 (440)
Q Consensus 238 ~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~---------------------~~ly~td~~~~~i~~~~~~~g~~~~~ 296 (440)
.+.|...++..........+. ......+++.. +.+.++-...+.|...+..+++....
T Consensus 255 D~~v~vwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 255 DQTVRVWVVATKECKAELREH-RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 333 (410)
T ss_dssp TSCEEEEETTTCCEEEEECCC-SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCceeeEecCC-CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEE
Confidence 667777776544433322211 12234444432 33555656677888888777765554
Q ss_pred EecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEEEEEcCCCEEEEEE
Q psy14258 297 IANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHEKEEYIYYAE 374 (440)
Q Consensus 297 ~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d 374 (440)
+.+-. ...++.+. |++.++++-+..+.|+..++... . ....+. .-....+++|.+.+..| ++-
T Consensus 334 ~~~h~~~v~~v~~~----------~~g~~l~s~s~D~~i~vwd~~~~-~---~~~~~~~h~~~v~~l~~~~~~~~l-~sg 398 (410)
T 1vyh_C 334 LVGHDNWVRGVLFH----------SGGKFILSCADDKTLRVWDYKNK-R---CMKTLNAHEHFVTSLDFHKTAPYV-VTG 398 (410)
T ss_dssp EECCSSCEEEEEEC----------SSSSCEEEEETTTEEEEECCTTS-C---CCEEEECCSSCEEEEEECSSSSCE-EEE
T ss_pred EECCCCcEEEEEEc----------CCCCEEEEEeCCCeEEEEECCCC-c---eEEEEcCCCCcEEEEEEcCCCCEE-EEE
Confidence 44322 23445433 23333444444578888887554 1 111222 22346689998877654 444
Q ss_pred CCCCeEEEE
Q psy14258 375 LTSYVIERR 383 (440)
Q Consensus 375 ~~~~~I~r~ 383 (440)
...++|..-
T Consensus 399 s~D~~i~vW 407 (410)
T 1vyh_C 399 SVDQTVKVW 407 (410)
T ss_dssp ETTSEEEEE
T ss_pred eCCCcEEEE
Confidence 456666543
No 174
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.84 E-value=0.0096 Score=62.08 Aligned_cols=309 Identities=7% Similarity=-0.063 Sum_probs=163.0
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeecc-c--cccce-eeeecCCcEEEe--------
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERS-L--LDGTE-RFPMVTHKIVYP-------- 150 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~-~--~~p~~-avD~~~~~lY~~-------- 150 (440)
+..+++.+.++.+| + ...+.|+..++.......+ +... . ..+.. ++.+.++.|.++
T Consensus 19 ~~~~~~spdg~~~~-~-~~dg~i~~~d~~~g~~~~~----------~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~ 86 (723)
T 1xfd_A 19 DPEAKWISDTEFIY-R-EQKGTVRLWNVETNTSTVL----------IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQ 86 (723)
T ss_dssp CCCCCBSSSSCBCC-C-CSSSCEEEBCGGGCCCEEE----------ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSS
T ss_pred ccccEEcCCCcEEE-E-eCCCCEEEEECCCCcEEEE----------eccccccccccceEEECCCCCEEEEEecCcccee
Confidence 45566776655333 3 3345666555543322111 1111 1 13677 888888877776
Q ss_pred ----ceEEEEecCCceEEEEEcCC--CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCc--------
Q psy14258 151 ----EAIYFCTHYMEHCMIAIDLN--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKI-------- 216 (440)
Q Consensus 151 ----~~I~~~~~dg~~~~~~~~~~--~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~-------- 216 (440)
..|.+.++++...+.+.... ...+..+++.|...+|.++.. ..|+..++++.....+.....
T Consensus 87 ~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~g~~~~~~~~~~~~~~~~g~ 162 (723)
T 1xfd_A 87 HSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE----NNIYYCAHVGKQAIRVVSTGKEGVIYNGL 162 (723)
T ss_dssp SCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET----TEEEEESSSSSCCEEEECCCBTTTEEEEE
T ss_pred ecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC----CeEEEEECCCCceEEEecCCCCCceECcc
Confidence 25778888876654443211 123678899997667777764 379999998766655544321
Q ss_pred ----------cCceEEEEeCCCCEEEEEeCCC---------------------------------CcEEEEEccCCCc-E
Q psy14258 217 ----------VYPYGVTVDFPTKHVYWVDTYL---------------------------------DFIDRINYDGTDR-K 252 (440)
Q Consensus 217 ----------~~P~gl~vD~~~~~ly~~d~~~---------------------------------~~i~~~~~dG~~~-~ 252 (440)
..+.++++.+.+.+|+++.... ..|...++.+... .
T Consensus 163 ~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 163 SDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp CCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred cceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 1236899998898888765321 1455666655442 3
Q ss_pred EEecCCc----cCceeeeeEecC--EE-EEEec--CCCeEEEEeccCCCceEEEecCC-CC-----eEEEEeccCCCCCC
Q psy14258 253 TIRKGFP----VQNLYDITVFEN--NL-FVTSW--RNQSIIRVNKFNSDDYETIANFS-RP-----FAIHIYHRQKQPDA 317 (440)
Q Consensus 253 ~i~~~~~----~~~p~gl~~~~~--~l-y~td~--~~~~i~~~~~~~g~~~~~~~~~~-~p-----~~~~v~~~~~qp~~ 317 (440)
.+..... ......+++..| .| ++++. ....|+.++..+|+...++.... .. ..+.+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~--------- 313 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVF--------- 313 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEE---------
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceE---------
Confidence 2221100 112234555444 44 33333 22457777776665544432111 00 11211
Q ss_pred CCCc-eeEEee-cCCcc------EEEEEE-cCCCCCCceeeeeec-CCCCce-EEEEEcCCCEEEEEECC----CCeEEE
Q psy14258 318 LKPS-TFLLYA-KGKPA------IIKGLT-FKRDGTTEQAIMPIT-DLKRPS-VIDYHEKEEYIYYAELT----SYVIER 382 (440)
Q Consensus 318 ~~~~-~~l~~~-~~~~~------~I~~i~-~~~~~~~~~~~~~~~-~~~~p~-~l~~d~~~~~vy~~d~~----~~~I~r 382 (440)
.|+ ..|+++ ....+ .|+.++ .++. ... ....+. +-.... .++++++++.||++... ...|++
T Consensus 314 -spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~-~~~-~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 314 -SKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNS-SND-NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp -CTTSCSEEEEEEECCSSSSCEEEEEEECSSCCS-SSC-CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred -cCCCCeEEEEEecccCCCcceeEEEEEeccCCC-Ccc-ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 133 345543 32223 577776 3433 100 011111 111222 36899999999988653 356888
Q ss_pred EecCCCCeEEEEEC---CCCCeeeEEEecCCCcEEEEeCC
Q psy14258 383 RKMFGRGKEVVIDT---GIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 383 ~~~~g~~~~~~~~~---~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
++.+|......+.. .-..+..+++.+.++.|..+-.+
T Consensus 391 ~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~ 430 (723)
T 1xfd_A 391 ANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEG 430 (723)
T ss_dssp ECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCS
T ss_pred EeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccC
Confidence 88877532222221 12346678888888877766443
No 175
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=97.84 E-value=0.0026 Score=66.41 Aligned_cols=285 Identities=9% Similarity=-0.008 Sum_probs=147.7
Q ss_pred cce-eeeecCCcEEEe--ceEEEEecCCceEEEEEcCCCC---CceEEEEcCCCCeEEEEEcCCC------CCcEEEEeC
Q psy14258 136 GTE-RFPMVTHKIVYP--EAIYFCTHYMEHCMIAIDLNLS---KPRGIALDPTSGYMFFTKWGAT------RPMLERSLL 203 (440)
Q Consensus 136 p~~-avD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~~~~---~P~~iavd~~~g~lywtd~~~~------~~~I~r~~~ 203 (440)
+.. ++.+.+..+|-. +.|.+.++++.....++..... .+.++++.|...+|.++..... ...|+..++
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 344 455445533322 6788888876665555543222 4889999997677777754221 157888898
Q ss_pred CCCCceeEEecC--ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCc-----------------cCcee
Q psy14258 204 DGTERFPMVTHK--IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFP-----------------VQNLY 264 (440)
Q Consensus 204 dG~~~~~l~~~~--~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~-----------------~~~p~ 264 (440)
++...+.+.... -..+..+++.+.+.+|.++.. +.|...+.++.....+..... +....
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEEC--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 876554333221 112566788888888888765 578888887766655544210 01224
Q ss_pred eeeEec--CEEEEEecCC--C-------------------------------eEEEEeccCCCceEEEecCCCC--eEEE
Q psy14258 265 DITVFE--NNLFVTSWRN--Q-------------------------------SIIRVNKFNSDDYETIANFSRP--FAIH 307 (440)
Q Consensus 265 gl~~~~--~~ly~td~~~--~-------------------------------~i~~~~~~~g~~~~~~~~~~~p--~~~~ 307 (440)
++++.. ..|+++.... - .|+..+..+++....+.....+ ..-.
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~ 256 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYY 256 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEE
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccce
Confidence 566653 3666554321 1 2333333333221111110000 0000
Q ss_pred EeccCCCCCCCCCce-eEEeecC---CccEEEEEEcCCCCCCceeeeeec--CCCC--ceEEEEEcCCCEEEEE-ECCCC
Q psy14258 308 IYHRQKQPDALKPST-FLLYAKG---KPAIIKGLTFKRDGTTEQAIMPIT--DLKR--PSVIDYHEKEEYIYYA-ELTSY 378 (440)
Q Consensus 308 v~~~~~qp~~~~~~~-~l~~~~~---~~~~I~~i~~~~~~~~~~~~~~~~--~~~~--p~~l~~d~~~~~vy~~-d~~~~ 378 (440)
+....- .|++ +|++... ....|+.+++++. .... ..... +... +..++|.++++.|+++ ....+
T Consensus 257 ~~~~~~-----SpDg~~l~~~~~~~~~~~~i~~~d~~~g-~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 329 (723)
T 1xfd_A 257 ITMVKW-----ATSTKVAVTWLNRAQNVSILTLCDATTG-VCTK-KHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQG 329 (723)
T ss_dssp EEEEEE-----SSSSEEEEEEEETTSCEEEEEEEETTTC-CEEE-EEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCS
T ss_pred eEEEEE-----eCCCeEEEEEEcCCCCeEEEEEEeCCCC-cceE-EEEeccCCEEeccCCCceEcCCCCeEEEEEecccC
Confidence 000000 2343 3433311 2246777777654 1111 11111 1111 2467899998888886 44444
Q ss_pred ------eEEEEe-cCCCC---eEEEEECCCCCeee-EEEecCCCcEEEEeCC----CCeEEEEEeCC
Q psy14258 379 ------VIERRK-MFGRG---KEVVIDTGIYNVEG-MAVDWMANNLYWTDAG----IGTINVAKISD 430 (440)
Q Consensus 379 ------~I~r~~-~~g~~---~~~~~~~~~~~~~g-lAvD~~~~~lYwtd~~----~~~I~~~~~~g 430 (440)
.|+..+ .++.. ...+.. +-..... +++++.++.||++... ...|..++++|
T Consensus 330 ~~~~~~~l~~~d~~~~~~~~~~~~l~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 330 GRGKFYHITVSSSQPNSSNDNIQSITS-GDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp SSSCEEEEEEECSSCCSSSCCCCBSCC-SSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSST
T ss_pred CCcceeEEEEEeccCCCCccceeEeec-CCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCC
Confidence 788888 45544 333322 2222333 6899999999987543 33455555555
No 176
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.82 E-value=0.017 Score=55.44 Aligned_cols=240 Identities=10% Similarity=0.006 Sum_probs=140.3
Q ss_pred ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce----eEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 174 PRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF----PMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 174 P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~----~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
+..++.+|....+.++-... +.|...+++...+. ..+...-.....+++.+.++.++.+-...+.|...++...
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~--g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGG--GAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSS--CCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCcEEECCCeEEEEEEEcCC--CEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 44566666333333332222 56777776543221 1111223356789998734444444445677888887543
Q ss_pred --------CcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEE--ecCC-CCeEEEEeccCCCCC
Q psy14258 250 --------DRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETI--ANFS-RPFAIHIYHRQKQPD 316 (440)
Q Consensus 250 --------~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~--~~~~-~p~~~~v~~~~~qp~ 316 (440)
....+... ......+++..+ .++++-..++.|...+..+++....+ .... ....+.+.
T Consensus 115 ~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~------- 185 (402)
T 2aq5_A 115 GLVLPLREPVITLEGH--TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWS------- 185 (402)
T ss_dssp CCSSCBCSCSEEEECC--SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEEC-------
T ss_pred CCccccCCceEEecCC--CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEEC-------
Confidence 22333222 345667777654 46666666788888888777655555 2222 23444433
Q ss_pred CCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee-cCCC--CceEEEEEcCCCEEEEEE---CCCCeEEEEecCCCCe
Q psy14258 317 ALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI-TDLK--RPSVIDYHEKEEYIYYAE---LTSYVIERRKMFGRGK 390 (440)
Q Consensus 317 ~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-~~~~--~p~~l~~d~~~~~vy~~d---~~~~~I~r~~~~g~~~ 390 (440)
|++.++++-+..+.|+.+++... .....+ .... .+..+++.+.+. ++.+- ...+.|...++.....
T Consensus 186 ---~~~~~l~~~~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 186 ---RDGALICTSCRDKRVRVIEPRKG----TVVAEKDRPHEGTRPVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ---TTSSCEEEEETTSEEEEEETTTT----EEEEEEECSSCSSSCCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSS
T ss_pred ---CCCCEEEEEecCCcEEEEeCCCC----ceeeeeccCCCCCcceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccC
Confidence 23323333334478888888655 222222 2222 367899998655 44444 5678899888875332
Q ss_pred --EEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCCCe
Q psy14258 391 --EVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISDFS 432 (440)
Q Consensus 391 --~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g~~ 432 (440)
.......-..+..+++++.++.||.+....+.|.+.++...+
T Consensus 258 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 258 PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 222223445688999999999999998778899999998633
No 177
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=97.81 E-value=0.033 Score=56.38 Aligned_cols=277 Identities=8% Similarity=-0.073 Sum_probs=146.2
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccc-cce-eeee--cCCcEEEe---ceEEE
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTE-RFPM--VTHKIVYP---EAIYF 155 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-p~~-avD~--~~~~lY~~---~~I~~ 155 (440)
+.++++++.++.|.... .+.|...++...... . .....+...-.. +.. ++.+ .++.|+.+ +.|.+
T Consensus 21 v~~~~~spdg~~l~~~~--~~~v~v~~~~~~~~~-~-----~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~v 92 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPC--GKSAFVRCLDDGDSK-V-----PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIV 92 (615)
T ss_dssp CCCCEEETTTTEEEEEE--TTEEEEEECCSSCCS-S-----CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEE
T ss_pred eeEEEECCCCCEEEEec--CCeEEEEECCCCCCc-c-----ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEE
Confidence 78899999888888777 355665555422000 0 011112233334 567 8877 66655554 67888
Q ss_pred EecCCc--------eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC-CCcEEEEeCCCCCceeEEecCccCceEEEEeC
Q psy14258 156 CTHYME--------HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT-RPMLERSLLDGTERFPMVTHKIVYPYGVTVDF 226 (440)
Q Consensus 156 ~~~dg~--------~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~-~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~ 226 (440)
.++... .....+........++++.|...+|+....... ...|...+ .+ .....+...-.....+++.+
T Consensus 93 w~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d-~~-~~~~~~~~~~~~v~~~~~~~ 170 (615)
T 1pgu_A 93 WGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD-SG-NSLGEVSGHSQRINACHLKQ 170 (615)
T ss_dssp EEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT-TC-CEEEECCSCSSCEEEEEECS
T ss_pred EeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE-CC-CcceeeecCCccEEEEEECC
Confidence 887422 222222334467889999997666666654321 02444443 12 22222222334577899987
Q ss_pred CCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccC---ceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEE-e--
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQ---NLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETI-A-- 298 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~---~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~-~-- 298 (440)
.+..++.+-...+.|...+...........+. .. ....+++..+ ..+++-...+.|...+..+++....+ .
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 249 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTH-HKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQ 249 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTBEEEEEECSS-SCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTT
T ss_pred CCCcEEEEEeCCCcEEEEeCCCcceeeeeccc-CCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccc
Confidence 77645555556678888776543332222221 22 4567777643 44444445778888887777665554 2
Q ss_pred -cCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCC-----CCceEEEEEcCCCEEE
Q psy14258 299 -NFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDL-----KRPSVIDYHEKEEYIY 371 (440)
Q Consensus 299 -~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~-----~~p~~l~~d~~~~~vy 371 (440)
... ....+.+. . ..+|+.+ +..+.|+..++... .....+... ..+.++.+. .++.++
T Consensus 250 ~~~~~~v~~~~~~-~---------~~~l~~~-~~d~~i~~wd~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 313 (615)
T 1pgu_A 250 EPVQGGIFALSWL-D---------SQKFATV-GADATIRVWDVTTS----KCVQKWTLDKQQLGNQQVGVVAT-GNGRII 313 (615)
T ss_dssp BCCCSCEEEEEES-S---------SSEEEEE-ETTSEEEEEETTTT----EEEEEEECCTTCGGGCEEEEEEE-ETTEEE
T ss_pred cccCCceEEEEEc-C---------CCEEEEE-cCCCcEEEEECCCC----cEEEEEcCCCCcccCceeEEEeC-CCCeEE
Confidence 212 23344333 1 1234333 33477887877644 112121111 234456664 455444
Q ss_pred EEECCCCeEEEEecCC
Q psy14258 372 YAELTSYVIERRKMFG 387 (440)
Q Consensus 372 ~~d~~~~~I~r~~~~g 387 (440)
.. ...+.|+..++..
T Consensus 314 ~~-~~~g~i~~~d~~~ 328 (615)
T 1pgu_A 314 SL-SLDGTLNFYELGH 328 (615)
T ss_dssp EE-ETTSCEEEEETTE
T ss_pred EE-ECCCCEEEEECCC
Confidence 43 3566777776654
No 178
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.031 Score=54.62 Aligned_cols=236 Identities=8% Similarity=-0.043 Sum_probs=134.7
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecC--Cc-eEEEEEc-CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHY--ME-HCMIAID-LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 205 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~d--g~-~~~~~~~-~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG 205 (440)
.+.+ ++.+.++.|+.+ +.|.+.++. +. ....+.. ..-..+.+++++|...+|+.++.. +.|...++..
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~---g~v~~~~~~~ 180 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKF---GDVYSIDINS 180 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETTS
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCC---CcEEEEecCC
Confidence 3566 788777777666 678888877 43 3333321 223568899999976777777654 5888888754
Q ss_pred CCcee----EEecCccCceEEEEeCC---CCEEEEEeCCCCcEEEEEccCCC-cEEEecCCccCceeeeeEecCEEEEEe
Q psy14258 206 TERFP----MVTHKIVYPYGVTVDFP---TKHVYWVDTYLDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFENNLFVTS 277 (440)
Q Consensus 206 ~~~~~----l~~~~~~~P~gl~vD~~---~~~ly~~d~~~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~~ly~td 277 (440)
..... .+......+..+++.+. +..|+.++ ..+.|...++.... ...+..+. ...+..+++..+.++++-
T Consensus 181 ~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~h-~~~v~~~~~sd~~~l~s~ 258 (450)
T 2vdu_B 181 IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-RDEHIKISHYPQCFIVDKWLFGH-KHFVSSICCGKDYLLLSA 258 (450)
T ss_dssp CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-TTSCEEEEEESCTTCEEEECCCC-SSCEEEEEECSTTEEEEE
T ss_pred cccccccceeeecccCceEEEEEcCCCCCCcEEEEEc-CCCcEEEEECCCCceeeeeecCC-CCceEEEEECCCCEEEEE
Confidence 43321 12222345778899876 44555554 56788888876443 33333221 334567777533344444
Q ss_pred cCCCeEEEEeccCCCceEEEecCC--------------------------CCeEEEEeccCCCCCCCCC-ceeEEeecCC
Q psy14258 278 WRNQSIIRVNKFNSDDYETIANFS--------------------------RPFAIHIYHRQKQPDALKP-STFLLYAKGK 330 (440)
Q Consensus 278 ~~~~~i~~~~~~~g~~~~~~~~~~--------------------------~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~ 330 (440)
...+.|...+..+++....+.... ...++... | ..+|+++...
T Consensus 259 ~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~----------~~~~~l~~~~~~ 328 (450)
T 2vdu_B 259 GGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS----------KNLPFVAFFVEA 328 (450)
T ss_dssp ESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC----------SSSSEEEEEETT
T ss_pred eCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe----------CCCCEEEEEECC
Confidence 467888888887777655443100 01112111 2 3567766534
Q ss_pred ccEEEEEEc-CCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECC-------CC--eEEEEecCC
Q psy14258 331 PAIIKGLTF-KRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELT-------SY--VIERRKMFG 387 (440)
Q Consensus 331 ~~~I~~i~~-~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~-------~~--~I~r~~~~g 387 (440)
.+.|..+++ +..+..-.....+..-..+.++++++ + .++++-.. .+ .|++++..+
T Consensus 329 d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~-~-~~~v~~~~~~~~~~~~~~i~v~~~~~~~ 393 (450)
T 2vdu_B 329 TKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHN-D-EFQVTLDNKESSGVQKNFAKFIEYNLNE 393 (450)
T ss_dssp CSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEET-T-EEEEEECCTTCCSSCCCSEEEEEEETTT
T ss_pred CCeEEEEEeccCCCCceeeccEeccCCceEEEEecC-C-cEEEEEecccCCCCCCcceEEEEEEcCC
Confidence 578888888 22211111222222235788999998 3 45555322 22 666666654
No 179
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.80 E-value=0.023 Score=52.98 Aligned_cols=280 Identities=5% Similarity=-0.086 Sum_probs=147.4
Q ss_pred eEEEEEeeecccEEEEEEcC---CCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeec---CCcEEEe---c
Q psy14258 82 EAIYFCTHYMEHCMIAIDLN---LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMV---THKIVYP---E 151 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~---~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~---~~~lY~~---~ 151 (440)
.+.+++|.+.+..+..+-.. .+.|+..++........ .....-..... ++.+. ++.|+.+ +
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLL---------REIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEE---------EEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccce---------eeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 38999999987777766644 56676666654332111 01112223344 55554 2434444 6
Q ss_pred eEEEEecCCce-EEEEEcCCCCCceEEE------EcCCCCeEEEEEcCCCCCcEEEEeCCCCC-ceeEEecC----ccCc
Q psy14258 152 AIYFCTHYMEH-CMIAIDLNLSKPRGIA------LDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHK----IVYP 219 (440)
Q Consensus 152 ~I~~~~~dg~~-~~~~~~~~~~~P~~ia------vd~~~g~lywtd~~~~~~~I~r~~~dG~~-~~~l~~~~----~~~P 219 (440)
.|.+.++.... ....+........+++ +.|....|+..... +.|...++.... ....+... ....
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d---~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD---GTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT---SCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred eEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC---CeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 78888887654 3333333445566664 45544455554443 578888887554 22222211 1134
Q ss_pred eEEE----EeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec----CEEEEEecCCCeEEEEeccCC
Q psy14258 220 YGVT----VDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE----NNLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 220 ~gl~----vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~----~~ly~td~~~~~i~~~~~~~g 291 (440)
..++ +.+.+..|+.+ ...+.|...++........... -.....+++.. +..+++-...+.|...+..++
T Consensus 168 ~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNMALRWETNI--KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTTEEEEEEEC--SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEEEE-ccCCeEEEEECccCceeeecCC--CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 4555 44445555444 4567888888876554333222 23456777763 344444455777777776554
Q ss_pred CceEEEe-----cCC-CCeEEEEeccCCCCCCCCCcee-EEeecCCccEEEEEEcCCCCCCc---------------eee
Q psy14258 292 DDYETIA-----NFS-RPFAIHIYHRQKQPDALKPSTF-LLYAKGKPAIIKGLTFKRDGTTE---------------QAI 349 (440)
Q Consensus 292 ~~~~~~~-----~~~-~p~~~~v~~~~~qp~~~~~~~~-l~~~~~~~~~I~~i~~~~~~~~~---------------~~~ 349 (440)
+....+. .-. ....+.+. |++. ++++-+..+.|+..++....... ...
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHL----------PQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEE----------TTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred CcccceeeeccCCCcCCEEEEEEC----------CCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 4332211 111 23344333 3432 45544445788777776431110 111
Q ss_pred eeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 350 MPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 350 ~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
..+. .-....+++|.+.+..+.++-...+.|+..++.
T Consensus 315 ~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred eccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 1122 223456899999888777666667787777665
No 180
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.79 E-value=0.025 Score=53.10 Aligned_cols=273 Identities=8% Similarity=-0.032 Sum_probs=154.0
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCce--EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEH--CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~--~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
.... ++.+.++.|+.+ +.|.+.++++.. ....+........++++.|...+|+.+... +.|...++.....
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d---g~i~vwd~~~~~~ 86 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD---RNAYVWTLKGRTW 86 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEEEETTEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC---CeEEEEECCCCee
Confidence 3455 666666655555 688888888764 333333445678999999965555555543 4777777754432
Q ss_pred eeEE--ecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc----EEEecCCccCceeeeeEecC-EEEEEecCCC
Q psy14258 209 FPMV--THKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR----KTIRKGFPVQNLYDITVFEN-NLFVTSWRNQ 281 (440)
Q Consensus 209 ~~l~--~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~----~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~ 281 (440)
.... ...-..+..+++.+.+..|+.+. ..+.|...+++.... ..+..+ .......+++..+ ..+++-...+
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKP-IRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTT-CCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecc-cCCCeeEEEEcCCCCEEEEEcCCC
Confidence 2222 12234577899987777777765 456787777765542 222111 1334677777644 4444444567
Q ss_pred eEEEEecc------------------CCCceEEEecCC-CCeEEEEeccCCCCCCCCCce-eEEeecCCccEEEEEEcCC
Q psy14258 282 SIIRVNKF------------------NSDDYETIANFS-RPFAIHIYHRQKQPDALKPST-FLLYAKGKPAIIKGLTFKR 341 (440)
Q Consensus 282 ~i~~~~~~------------------~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~-~l~~~~~~~~~I~~i~~~~ 341 (440)
.|...+.. .++....+.... ....+.+. |++ +|+.+ +..+.|+..++..
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~l~~~-~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS----------ANGSRVAWV-SHDSTVCLADADK 233 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC----------SSSSEEEEE-ETTTEEEEEEGGG
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC----------CCCCEEEEE-eCCCEEEEEECCC
Confidence 77766632 222222222111 22333332 333 44444 3447888888865
Q ss_pred CCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCC--CC-----------------------------
Q psy14258 342 DGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG--RG----------------------------- 389 (440)
Q Consensus 342 ~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g--~~----------------------------- 389 (440)
. .....+.. ......+++++.+..+. +. ..+.|...++.. ..
T Consensus 234 ~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1k8k_C 234 K----MAVATLASETLPLLAVTFITESSLVA-AG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDK 307 (372)
T ss_dssp T----TEEEEEECSSCCEEEEEEEETTEEEE-EE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCC
T ss_pred C----ceeEEEccCCCCeEEEEEecCCCEEE-EE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccc
Confidence 5 12222222 22457899998765444 43 667776666654 10
Q ss_pred --e--------EEEEECCCCCeeeEEEecCCC---cEEEEeCCCCeEEEEEeC
Q psy14258 390 --K--------EVVIDTGIYNVEGMAVDWMAN---NLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 390 --~--------~~~~~~~~~~~~glAvD~~~~---~lYwtd~~~~~I~~~~~~ 429 (440)
. ..+....-..+..+++....+ ++..+-...+.|.+.+++
T Consensus 308 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 308 KASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp CC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred ccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 0 001012334678888665565 677777778889888875
No 181
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.78 E-value=0.054 Score=56.56 Aligned_cols=270 Identities=11% Similarity=0.056 Sum_probs=154.1
Q ss_pred cce-eeeecCCcEEEe---c-----eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC------------
Q psy14258 136 GTE-RFPMVTHKIVYP---E-----AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT------------ 194 (440)
Q Consensus 136 p~~-avD~~~~~lY~~---~-----~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~------------ 194 (440)
..+ ++.+.++.|.++ + .|.+.++++.....+.... ....+++..|....||++.....
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 445 788888888777 1 7999999876654332211 12567899887778888864421
Q ss_pred -CCcEEEEeCCCCCce-eEEecC---ccCceEEEEeCCCCEEEEEeC-C---CCcEEEEEccC------C--CcEEEecC
Q psy14258 195 -RPMLERSLLDGTERF-PMVTHK---IVYPYGVTVDFPTKHVYWVDT-Y---LDFIDRINYDG------T--DRKTIRKG 257 (440)
Q Consensus 195 -~~~I~r~~~dG~~~~-~l~~~~---~~~P~gl~vD~~~~~ly~~d~-~---~~~i~~~~~dG------~--~~~~i~~~ 257 (440)
..+|++.++++...+ .++... -.+..++++.+.++.|+++.. . ...|+.+++++ . ..+.+...
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 135999999765432 233222 224568899988998888753 2 46899999875 3 34555443
Q ss_pred CccCceeeeeEecCEEEEEecC---CCeEEEEeccCCCc---eEEEecCC--CCeEEEEeccCCCCCCCCCceeEEeecC
Q psy14258 258 FPVQNLYDITVFENNLFVTSWR---NQSIIRVNKFNSDD---YETIANFS--RPFAIHIYHRQKQPDALKPSTFLLYAKG 329 (440)
Q Consensus 258 ~~~~~p~gl~~~~~~ly~td~~---~~~i~~~~~~~g~~---~~~~~~~~--~p~~~~v~~~~~qp~~~~~~~~l~~~~~ 329 (440)
. -.....+.-+++.||+.... +..|+.++..+++. ..++.... ...++.+. +++.|+++..
T Consensus 286 ~-~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~----------~~~~lv~~~~ 354 (710)
T 2xdw_A 286 F-EGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACV----------RSNFLVLCYL 354 (710)
T ss_dssp S-SSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEE----------TTTEEEEEEE
T ss_pred C-CcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEE----------cCCEEEEEEE
Confidence 1 11222355567888877542 35788888766642 33433322 12233333 2344555433
Q ss_pred C--ccEEEEEEc-CCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEE---CCCCeEEEEecCCCC--eEEEEECCCC--
Q psy14258 330 K--PAIIKGLTF-KRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAE---LTSYVIERRKMFGRG--KEVVIDTGIY-- 399 (440)
Q Consensus 330 ~--~~~I~~i~~-~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d---~~~~~I~r~~~~g~~--~~~~~~~~~~-- 399 (440)
. ..+|+.+++ ++. . ...++.. .....++++++.++.++++- ..-.+|++.++.+.. .+++-...+.
T Consensus 355 ~~g~~~l~~~~~~~g~-~--~~~l~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~~~l~~~~~~~~ 430 (710)
T 2xdw_A 355 HDVKNTLQLHDLATGA-L--LKIFPLE-VGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEELEPRVFREVTVKGI 430 (710)
T ss_dssp ETTEEEEEEEETTTCC-E--EEEECCC-SSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSCCCEEEEECCCTTC
T ss_pred ECCEEEEEEEECCCCC-E--EEecCCC-CceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCccceEEeeecccCCc
Confidence 2 346777777 333 1 1122222 22345677788777887763 235689999997654 4555443322
Q ss_pred CeeeEEEecCCCcEEEEeCCCCeEEE
Q psy14258 400 NVEGMAVDWMANNLYWTDAGIGTINV 425 (440)
Q Consensus 400 ~~~glAvD~~~~~lYwtd~~~~~I~~ 425 (440)
.+..+.. ..++++......|..
T Consensus 431 ~~~~~~~----~~~~~~~~dg~~i~~ 452 (710)
T 2xdw_A 431 DASDYQT----VQIFYPSKDGTKIPM 452 (710)
T ss_dssp CGGGEEE----EEEEEECTTSCEEEE
T ss_pred CccccEE----EEEEEEcCCCCEEEE
Confidence 2334433 345565433334443
No 182
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.78 E-value=0.0045 Score=57.60 Aligned_cols=255 Identities=12% Similarity=0.061 Sum_probs=138.9
Q ss_pred eeeecCCcEEEe--ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCc
Q psy14258 139 RFPMVTHKIVYP--EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKI 216 (440)
Q Consensus 139 avD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~ 216 (440)
++|. .+.||++ + +.+.+.+|......- .........+++ .|.||+.... +.|.+.+.+|....... ...
T Consensus 66 ~~~~-~g~l~v~t~~-l~~~d~~g~~~~~~~-~~~~~~~~~~~~--~~~l~v~t~~---~~l~~~d~~g~~~~~~~-~~~ 136 (330)
T 3hxj_A 66 SIGK-DGTIYFGSDK-VYAINPDGTEKWRFD-TKKAIVSDFTIF--EDILYVTSMD---GHLYAINTDGTEKWRFK-TKK 136 (330)
T ss_dssp EETT-TTEECCSSCE-EEEECCCGGGGGGSC-C-----CCEEEE--TTEEEEECTT---SEEEEECTTSCEEEEEE-CSS
T ss_pred EEec-CCcEEEecCc-EEEECCCCcEEEEEE-CCCCcccCceEE--CCEEEEEecC---CEEEEEcCCCCEEEEEc-CCC
Confidence 5553 5557776 6 777777665421110 011112234454 6889887754 58999998855332222 222
Q ss_pred cCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEe-cCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 217 VYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF-ENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 217 ~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~-~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
.....+.+| ..++||++. ..+.|..++.+|......... ......+.++ ++.||++. +.|++++ .+|+...
T Consensus 137 ~~~~~~~~~-~~g~l~vgt-~~~~l~~~d~~g~~~~~~~~~--~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~ 208 (330)
T 3hxj_A 137 AIYATPIVS-EDGTIYVGS-NDNYLYAINPDGTEKWRFKTN--DAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKW 208 (330)
T ss_dssp CCCSCCEEC-TTSCEEEEC-TTSEEEEECTTSCEEEEEECS--SCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEE
T ss_pred ceeeeeEEc-CCCEEEEEc-CCCEEEEECCCCCEeEEEecC--CCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEE
Confidence 223456776 466777764 457899998885443333222 2234456665 55888876 7888888 4554432
Q ss_pred EEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEE
Q psy14258 296 TIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAE 374 (440)
Q Consensus 296 ~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d 374 (440)
.... ......+.+. +++.|+++.. .+.+..++.++. ...........+..+.+|. ++.||++.
T Consensus 209 ~~~~~~~~~~~~~~~----------~~g~l~v~t~-~~gl~~~~~~g~----~~~~~~~~~~~~~~~~~~~-~g~l~v~t 272 (330)
T 3hxj_A 209 NFYAGYWTVTRPAIS----------EDGTIYVTSL-DGHLYAINPDGT----EKWRFKTGKRIESSPVIGN-TDTIYFGS 272 (330)
T ss_dssp EECCSSCCCSCCEEC----------TTSCEEEEET-TTEEEEECTTSC----EEEEEECSSCCCSCCEECT-TSCEEEEC
T ss_pred EEccCCcceeceEEC----------CCCeEEEEcC-CCeEEEECCCCC----EeEEeeCCCCccccceEcC-CCeEEEec
Confidence 2221 1112222222 3456777654 267777765444 1111111111233455664 46687775
Q ss_pred CCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 375 LTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 375 ~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
..+.|++++.+|...... ...-.....+++|. .++||+... .+.+......-
T Consensus 273 -~~ggl~~~d~~g~~~~~~-~~~~~~~~~~~~d~-~g~l~~gt~-~G~~~~~~~~~ 324 (330)
T 3hxj_A 273 -YDGHLYAINPDGTEKWNF-ETGSWIIATPVIDE-NGTIYFGTR-NGKFYALFNLE 324 (330)
T ss_dssp -TTCEEEEECTTSCEEEEE-ECSSCCCSCCEECT-TCCEEEECT-TSCEEEEEC--
T ss_pred -CCCCEEEECCCCcEEEEE-EcCCccccceEEcC-CCEEEEEcC-CCeEEEEeccc
Confidence 456899999876433332 22334567788884 667888754 56677766554
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.75 E-value=0.028 Score=52.54 Aligned_cols=140 Identities=9% Similarity=0.015 Sum_probs=88.6
Q ss_pred ccce-eeeecCCcEEEe------------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC--CCCcEE
Q psy14258 135 DGTE-RFPMVTHKIVYP------------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA--TRPMLE 199 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~------------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~--~~~~I~ 199 (440)
.+.+ ++ .++.|+|+ ..|.+.++++...+.+ .....+++.|...+|+++.... ....|+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 3445 56 56666664 3577888887765555 4577889999777888876432 114699
Q ss_pred EEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC--------------------------CCcEEEEEccCCCc-E
Q psy14258 200 RSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY--------------------------LDFIDRINYDGTDR-K 252 (440)
Q Consensus 200 r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~--------------------------~~~i~~~~~dG~~~-~ 252 (440)
..++++...+.+..... ...+++.+.+.+|+++... ...|..+++++... +
T Consensus 89 ~~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 89 VADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 99998866655554332 7788998888888887522 34688888877655 4
Q ss_pred EEecCCccCceeeeeEecCEEEE-EecC--------CCeEEEEe
Q psy14258 253 TIRKGFPVQNLYDITVFENNLFV-TSWR--------NQSIIRVN 287 (440)
Q Consensus 253 ~i~~~~~~~~p~gl~~~~~~ly~-td~~--------~~~i~~~~ 287 (440)
.+.. . ....+++..+.+++ +... ...|+.++
T Consensus 167 ~l~~--~--~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 167 EFEK--P--RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp EEEE--E--TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE
T ss_pred eecC--C--CcccccCCCCeEEEEEecccccccccccccEEEeC
Confidence 4432 1 34455555543443 3321 33677777
No 184
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.75 E-value=0.028 Score=52.50 Aligned_cols=279 Identities=8% Similarity=-0.049 Sum_probs=151.7
Q ss_pred ceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEE
Q psy14258 81 QEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFC 156 (440)
Q Consensus 81 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~ 156 (440)
..+.++++++.++.|+.... .+.|...++.... .+ ..+...-..+.. ++.+.++.|+.+ +.|.+.
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~-dg~i~vwd~~~~~--~~--------~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK-DSSASVWYSLNGE--RL--------GTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES-SSCEEEEETTTCC--EE--------EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ceEEEEEEcCCCCEEEEEeC-CCEEEEEeCCCch--hh--------hhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 34899999987666665554 4566655544221 11 112222334455 666655555544 689999
Q ss_pred ecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcC--CCCCcEEEEeCCCCCce-eEE----------ec--CccCceE
Q psy14258 157 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWG--ATRPMLERSLLDGTERF-PMV----------TH--KIVYPYG 221 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~--~~~~~I~r~~~dG~~~~-~l~----------~~--~~~~P~g 221 (440)
++....+...+. .-..+..+++.|...+|+.+... ...+.|...+++..... .+. .. .......
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 987665544444 44678999999966666655433 00135666665433211 111 11 1126778
Q ss_pred EEEeCCCCEEEEEeCCCCcEEEEEccC-CCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEec
Q psy14258 222 VTVDFPTKHVYWVDTYLDFIDRINYDG-TDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIAN 299 (440)
Q Consensus 222 l~vD~~~~~ly~~d~~~~~i~~~~~dG-~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~ 299 (440)
+++++.+..|+.+. ..+.|...++.. ......... ......++++..+ ..+++-...+.|...+..+++....+..
T Consensus 181 ~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 258 (369)
T 3zwl_B 181 AGWSTKGKYIIAGH-KDGKISKYDVSNNYEYVDSIDL-HEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET 258 (369)
T ss_dssp EEECGGGCEEEEEE-TTSEEEEEETTTTTEEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCCEEEEEc-CCCEEEEEECCCCcEeEEEEec-CCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC
Confidence 88887777776665 457888888765 222222222 1334667777644 3444444577888888877766555543
Q ss_pred CCCCeEEEEeccCCCCCCCCCceeEEeecCCcc-------------EEEEEEcCCCCCCceeeeeec-CCCCceEEEEEc
Q psy14258 300 FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPA-------------IIKGLTFKRDGTTEQAIMPIT-DLKRPSVIDYHE 365 (440)
Q Consensus 300 ~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~-------------~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~~d~ 365 (440)
......+.+. +. ..+++++..... .++..++... .....+. .......+++.+
T Consensus 259 ~~~~~~~~~~-~~--------~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~----~~~~~~~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 259 DCPLNTAVIT-PL--------KEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFE----EEIGRVQGHFGPLNTVAISP 325 (369)
T ss_dssp SSCEEEEEEC-SS--------SSEEEEEECCC-------------CEEEEEETTTC----CEEEEEECCSSCEEEEEECT
T ss_pred CCCceeEEec-CC--------CceEEEeecCCCceEEEEecCCCcceeEEEecCCC----cchhheecccCcEEEEEECC
Confidence 2233334332 11 234444433211 4555554433 1122222 233566899998
Q ss_pred CCCEEEEEECCCCeEEEEecCC
Q psy14258 366 KEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 366 ~~~~vy~~d~~~~~I~r~~~~g 387 (440)
.++.|.-+ ...+.|...+++.
T Consensus 326 ~~~~l~s~-~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 326 QGTSYASG-GEDGFIRLHHFEK 346 (369)
T ss_dssp TSSEEEEE-ETTSEEEEEEECH
T ss_pred CCCEEEEE-cCCCeEEEEECcc
Confidence 77755444 4567777776653
No 185
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.72 E-value=0.034 Score=52.54 Aligned_cols=220 Identities=7% Similarity=-0.090 Sum_probs=127.7
Q ss_pred ceEEEEecCCceEE-EE---EcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeC
Q psy14258 151 EAIYFCTHYMEHCM-IA---IDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDF 226 (440)
Q Consensus 151 ~~I~~~~~dg~~~~-~~---~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~ 226 (440)
+.|.+-+++..... +. .........++++.|...+|.-.... +.|...++........+...-.....+++.+
T Consensus 103 g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d---~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~ 179 (344)
T 4gqb_B 103 GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD---ICIKVWDLAQQVVLSSYRAHAAQVTCVAASP 179 (344)
T ss_dssp SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECS
T ss_pred CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC---CeEEEEECCCCcEEEEEcCcCCceEEEEecC
Confidence 67888887654321 11 11234567899999954444444433 5788888764433222222234567888887
Q ss_pred CCCEEEEEeCCCCcEEEEEccCCCc-EEEecCCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEecCCC-
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDGTDR-KTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIANFSR- 302 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG~~~-~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~- 302 (440)
.+..++.+-...+.|..-++..... ..+........+..+++.. +.++.+-..++.|...+..+++....+..-..
T Consensus 180 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~ 259 (344)
T 4gqb_B 180 HKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQC 259 (344)
T ss_dssp SCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSC
T ss_pred CCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCC
Confidence 7777777666677888888754433 3332211123456777763 36777766678888888877777665554332
Q ss_pred CeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEE
Q psy14258 303 PFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIE 381 (440)
Q Consensus 303 p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~ 381 (440)
...+.+. |+ ..++++-+..+.|+..++... +.......-....+++|.|.++.++.+-...++|.
T Consensus 260 v~~v~fs----------p~g~~~lasgs~D~~i~vwd~~~~----~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~ 325 (344)
T 4gqb_B 260 VTGLVFS----------PHSVPFLASLSEDCSLAVLDSSLS----ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVV 325 (344)
T ss_dssp EEEEEEC----------SSSSCCEEEEETTSCEEEECTTCC----EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred EEEEEEc----------cCCCeEEEEEeCCCeEEEEECCCC----cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEE
Confidence 3444332 22 223443333477877776544 22222222335678999998887777766678887
Q ss_pred EEecCC
Q psy14258 382 RRKMFG 387 (440)
Q Consensus 382 r~~~~g 387 (440)
.-++..
T Consensus 326 ~w~v~~ 331 (344)
T 4gqb_B 326 HHVVPT 331 (344)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 777654
No 186
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.72 E-value=0.035 Score=52.69 Aligned_cols=279 Identities=11% Similarity=-0.047 Sum_probs=157.3
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEc--CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAID--LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE 207 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~--~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~ 207 (440)
.... ++.+.+.+++++ +.|.+.++++......+. .......++++.|.++.++.+-... +.|...++.+..
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d--~~i~iwd~~~~~ 152 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR--GATTLRDFSGSV 152 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT--TEEEEEETTSCE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC--CEEEEEECCCCc
Confidence 3445 666655345555 689999998665554443 2446788999999555555544333 589999998754
Q ss_pred ceeEEecC--ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-E-EEEEecCCCeE
Q psy14258 208 RFPMVTHK--IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-N-LFVTSWRNQSI 283 (440)
Q Consensus 208 ~~~l~~~~--~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~-ly~td~~~~~i 283 (440)
...+.... ......+++.+.+..|+.+. ..+.|...++++.....+... ......+++..+ . ++++-...+.|
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~h--~~~v~~~~~~~~~~~~l~s~~~d~~i 229 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGD-STGRLLLLGLDGHEIFKEKLH--KAKVTHAEFNPRCDWLMATSSVDATV 229 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEE-TTSEEEEEETTSCEEEEEECS--SSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEEC-CCCCEEEEECCCCEEEEeccC--CCcEEEEEECCCCCCEEEEEeCCCEE
Confidence 44333221 24478899998777776665 567898888877655555432 345677887765 3 66666667888
Q ss_pred EEEeccCCC----ceEEEecCCCCeEEEEeccCCCCCCCCC-ceeEEeecCCccEEEEEEcCCCCCCceeeee---ecCC
Q psy14258 284 IRVNKFNSD----DYETIANFSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMP---ITDL 355 (440)
Q Consensus 284 ~~~~~~~g~----~~~~~~~~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~---~~~~ 355 (440)
...+..+++ ....+........+.+. | ++.++++-+..+.|+..++............ ....
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s----------~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 230 KLWDLRNIKDKNSYIAEMPHEKPVNAAYFN----------PTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEEEGGGCCSTTCEEEEEECSSCEEEEEEC----------TTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEEeCCCCCcccceEEEecCCCceEEEEEc----------CCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 888876632 22233222233444433 3 3333334344578888888654111111100 0000
Q ss_pred CCceEEEEEcCCCEEEE--------EECCCCeEEEEecCCCCeEEEEE-CC-CCCeeeEEEecCCCcEEEEeCCCCeEEE
Q psy14258 356 KRPSVIDYHEKEEYIYY--------AELTSYVIERRKMFGRGKEVVID-TG-IYNVEGMAVDWMANNLYWTDAGIGTINV 425 (440)
Q Consensus 356 ~~p~~l~~d~~~~~vy~--------~d~~~~~I~r~~~~g~~~~~~~~-~~-~~~~~glAvD~~~~~lYwtd~~~~~I~~ 425 (440)
..+....+.+.+..+.. +-...+.|+..++........+. .+ -..+..+++.+.++.|.-.. .+.|.+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s--d~~i~i 377 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM--GFNILI 377 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE--TTEEEE
T ss_pred ccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec--CCcEEE
Confidence 11222233333333322 22356778888876433322222 11 23455569988777665553 588999
Q ss_pred EEeCC
Q psy14258 426 AKISD 430 (440)
Q Consensus 426 ~~~~g 430 (440)
.+++.
T Consensus 378 w~~~~ 382 (383)
T 3ei3_B 378 WNRED 382 (383)
T ss_dssp EECC-
T ss_pred EecCC
Confidence 88864
No 187
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.71 E-value=0.032 Score=52.12 Aligned_cols=293 Identities=4% Similarity=-0.057 Sum_probs=148.5
Q ss_pred eEEEEEeeec---ccEEEEEEcCCCCceeEEeCCCC-Ccceeeccccccceeeccccccce-eeeecCC---cEEEe---
Q psy14258 82 EAIYFCTHYM---EHCMIAIDLNLSKPRGIALDPTS-GYMFFTKWGATRPMLERSLLDGTE-RFPMVTH---KIVYP--- 150 (440)
Q Consensus 82 ~~~~i~~d~~---~~~ly~~d~~~~~I~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~---~lY~~--- 150 (440)
.+.+++|++. ...++++-...+.|...++.... +..+.... .......... ++.+... .++++
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~l~~~~~ 93 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYV------DADADENFYTCAWTYDSNTSHPLLAVAGS 93 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEE------CSCTTCCEEEEEEEECTTTCCEEEEEEET
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecc------ccCCCCcEEEEEeccCCCCCCCEEEEecC
Confidence 3889999873 33334444344566666654221 11110000 0001123455 6665532 34444
Q ss_pred -ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE---ecCccCceEEEEeC
Q psy14258 151 -EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV---THKIVYPYGVTVDF 226 (440)
Q Consensus 151 -~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~---~~~~~~P~gl~vD~ 226 (440)
+.|.+.++........+........++++.|..+.++.+-... +.|...++........+ ...-..+..+++++
T Consensus 94 dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 94 RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD--HALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT--SCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC--CeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 6899998875554444444557789999999555555554333 58888888754443333 12344678899987
Q ss_pred CCCEEEEEeCCCCcEEEEEccCCCcE-EEe--------------------------cCCccCceeeeeEecCEEEEEecC
Q psy14258 227 PTKHVYWVDTYLDFIDRINYDGTDRK-TIR--------------------------KGFPVQNLYDITVFENNLFVTSWR 279 (440)
Q Consensus 227 ~~~~ly~~d~~~~~i~~~~~dG~~~~-~i~--------------------------~~~~~~~p~gl~~~~~~ly~td~~ 279 (440)
.+..|+.+. ..+.|...++...... .+. ..........+++.++.| .+-..
T Consensus 172 ~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-~~~~~ 249 (366)
T 3k26_A 172 LGEKIMSCG-MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLI-LSKSC 249 (366)
T ss_dssp TSSEEEEEE-TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEE-EEECS
T ss_pred CCCEEEEec-CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEE-EEEec
Confidence 777766664 4567877776532111 000 000122345666665544 44445
Q ss_pred CCeEEEEeccCCCceE-EEecCC-CCeEEEEeccCCCCCCC---CCc--eeEEeecCCccEEEEEEcCCCCCCceeeeee
Q psy14258 280 NQSIIRVNKFNSDDYE-TIANFS-RPFAIHIYHRQKQPDAL---KPS--TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI 352 (440)
Q Consensus 280 ~~~i~~~~~~~g~~~~-~~~~~~-~p~~~~v~~~~~qp~~~---~~~--~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~ 352 (440)
.+.|...+..++.... .+.... ...-+..+.....+... .|+ +.++++-+..+.|+..++............+
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 329 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL 329 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE
Confidence 6777777765543311 000000 01111111111111000 122 3344444445889888887651111122233
Q ss_pred cC---CCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 353 TD---LKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 353 ~~---~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
.. ......++|.+.++.|..+. ..+.|+.-++
T Consensus 330 ~~~~~~~~v~~~~~s~~~~~l~s~~-~dg~i~iwd~ 364 (366)
T 3k26_A 330 THHKCGAAIRQTSFSRDSSILIAVC-DDASIWRWDR 364 (366)
T ss_dssp CCTTCCSCEEEEEECTTSSEEEEEE-TTSEEEEEEC
T ss_pred cccccCCceEEEEeCCCCCeEEEEe-CCCEEEEEEe
Confidence 33 24567899999877665544 5667766554
No 188
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.71 E-value=0.036 Score=52.64 Aligned_cols=283 Identities=8% Similarity=-0.063 Sum_probs=152.9
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFC 156 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~ 156 (440)
.+.++++++.+..++.+-...+.|...++........ ......-..+.+ ++.+.+++++++ +.|.+.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~--------~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF--------IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE--------ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee--------eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 3899999988634555555557777666653332111 000012233444 554423344444 789999
Q ss_pred ecCCceEEEEEcCC--CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEE
Q psy14258 157 THYMEHCMIAIDLN--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWV 234 (440)
Q Consensus 157 ~~dg~~~~~~~~~~--~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~ 234 (440)
++.+.....+.... ......+++.|....|+..... +.|...++++.....+. ........+++.+.+..++.+
T Consensus 147 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 147 DFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST---GRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp ETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT---SEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEE
T ss_pred ECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC---CCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEE
Confidence 99986665554422 2458899999966555555544 58999999765444332 234567889999777745555
Q ss_pred eCCCCcEEEEEccC----CCcEEEecCCccCceeeeeEec-C-EEEEEecCCCeEEEEeccCCCceEEEecCC-------
Q psy14258 235 DTYLDFIDRINYDG----TDRKTIRKGFPVQNLYDITVFE-N-NLFVTSWRNQSIIRVNKFNSDDYETIANFS------- 301 (440)
Q Consensus 235 d~~~~~i~~~~~dG----~~~~~i~~~~~~~~p~gl~~~~-~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~------- 301 (440)
-...+.|...++.. ......... ......+++.. + .++++-...+.|...+..+++....+....
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 300 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEMPH--EKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHL 300 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEEEC--SSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTS
T ss_pred EeCCCEEEEEeCCCCCcccceEEEecC--CCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccc
Confidence 55677888888763 222222221 34567788765 3 444444557888888877766544322110
Q ss_pred CCeEEEEeccCCCCC--CCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC--C-CCceEEEEEcCCCEEEEEECC
Q psy14258 302 RPFAIHIYHRQKQPD--ALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD--L-KRPSVIDYHEKEEYIYYAELT 376 (440)
Q Consensus 302 ~p~~~~v~~~~~qp~--~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~--~-~~p~~l~~d~~~~~vy~~d~~ 376 (440)
.+... .+++..... ...|++.+ +-+..+.|+..++... .....+.+ . .....++|.+.+..|.-+.
T Consensus 301 ~~~~~-~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~----~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-- 371 (383)
T 3ei3_B 301 TPIKA-TWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSG----GLVHQLRDPNAAGIISLNKFSPTGDVLASGM-- 371 (383)
T ss_dssp CCCCC-EECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTC----CEEEEECBTTBCSCCCEEEECTTSSEEEEEE--
T ss_pred cceEE-eccCCCCceEEEecCCccc--ccCCCCeEEEEecCCC----ceeeeecCCCCCceEEEEEEecCccEEEEec--
Confidence 11111 111100000 00011111 2223467777777544 22222221 1 2234568999888665553
Q ss_pred CCeEEEEecCC
Q psy14258 377 SYVIERRKMFG 387 (440)
Q Consensus 377 ~~~I~r~~~~g 387 (440)
.+.|..-+++.
T Consensus 372 d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 GFNILIWNRED 382 (383)
T ss_dssp TTEEEEEECC-
T ss_pred CCcEEEEecCC
Confidence 67777776653
No 189
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.71 E-value=0.041 Score=53.18 Aligned_cols=283 Identities=10% Similarity=-0.012 Sum_probs=156.5
Q ss_pred ccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc
Q psy14258 133 LLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER 208 (440)
Q Consensus 133 ~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~ 208 (440)
...+.. ++.+.+..|.-+ +.|.+.++........+........+++++|. |.++.+-... +.|...++.+...
T Consensus 108 ~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~-~~~l~sgs~D--~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 108 RSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS-GKLLASCSAD--MTIKLWDFQGFEC 184 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT-SSEEEEEETT--SCCCEEETTSSCE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC-CCEEEEEeCC--CeEEEEeCCCCce
Confidence 334555 676655533333 68888888755444334444567889999985 5444443332 4677777765433
Q ss_pred eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEe
Q psy14258 209 FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVN 287 (440)
Q Consensus 209 ~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~ 287 (440)
...+...-.....+++.+.+..|+-+. ..+.|...++..........+. ......+++..+ .++.+-...+.|...+
T Consensus 185 ~~~~~~h~~~V~~v~~~p~~~~l~s~s-~D~~i~~wd~~~~~~~~~~~~h-~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 185 IRTMHGHDHNVSSVSIMPNGDHIVSAS-RDKTIKMWEVQTGYCVKTFTGH-REWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp EECCCCCSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEECC-SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eEEEcCCCCCEEEEEEeCCCCEEEEEe-CCCeEEEEECCCCcEEEEEeCC-CccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 222222233567888987666665554 5677888877543332222221 233455666544 5666666677787777
Q ss_pred ccCCCceEEEecCCC-CeEEEEeccCCCC------CC-----CCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-
Q psy14258 288 KFNSDDYETIANFSR-PFAIHIYHRQKQP------DA-----LKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD- 354 (440)
Q Consensus 288 ~~~g~~~~~~~~~~~-p~~~~v~~~~~qp------~~-----~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~- 354 (440)
..+++....+..-.. ...+.+ +|.... .. ....+.++++-+..+.|+..++... .....+.+
T Consensus 263 ~~~~~~~~~~~~h~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~~~h 337 (410)
T 1vyh_C 263 VATKECKAELREHRHVVECISW-APESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTLVGH 337 (410)
T ss_dssp TTTCCEEEEECCCSSCEEEEEE-CCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT----EEEEEEECC
T ss_pred CCCCceeeEecCCCceEEEEEE-cCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEEECC
Confidence 766655444433222 223332 221100 00 0011233444444578888887655 22223332
Q ss_pred CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEE
Q psy14258 355 LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAK 427 (440)
Q Consensus 355 ~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~ 427 (440)
-....+++|++.+..|+ +-...++|+.-++........+...-..+..|++.+.+..| .+-...++|.+.+
T Consensus 338 ~~~v~~v~~~~~g~~l~-s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l-~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 338 DNWVRGVLFHSGGKFIL-SCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYV-VTGSVDQTVKVWE 408 (410)
T ss_dssp SSCEEEEEECSSSSCEE-EEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCE-EEEETTSEEEEEC
T ss_pred CCcEEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEe
Confidence 23456899999877665 44467889888886543333334445678899998755544 4444456666654
No 190
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.66 E-value=0.034 Score=51.10 Aligned_cols=276 Identities=9% Similarity=0.008 Sum_probs=157.8
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCcee
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFP 210 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~ 210 (440)
.+.. ++.+.++.|+.+ +.|.+.+.........+........+++..|...+|+..... +.|...+++......
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD---KTLKIWDVSSGKCLK 101 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC---CEEEEEECCCCcEEE
Confidence 4555 666655544444 678887776544444444445668899999965555555444 578888886544333
Q ss_pred EEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEecc
Q psy14258 211 MVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKF 289 (440)
Q Consensus 211 l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~ 289 (440)
.+.........+++.+.+..|+.+. ..+.|...++........... .......+++..+ .++.+-...+.|...+..
T Consensus 102 ~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 102 TLKGHSNYVFCCNFNPQSNLIVSGS-FDESVRIWDVKTGKCLKTLPA-HSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEE-TTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCEEEEEecC-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 3333334567888887776666554 456788888764443322222 1223456776544 444555557788888877
Q ss_pred CCCceEEEec-CCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCC---CceEEEEE
Q psy14258 290 NSDDYETIAN-FSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLK---RPSVIDYH 364 (440)
Q Consensus 290 ~g~~~~~~~~-~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~---~p~~l~~d 364 (440)
+++....+.. ...+.....++ |+ .+|+.+ +..+.|+..++... .....+.+.. ......+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~-~~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSFVKFS---------PNGKYILAA-TLDNTLKLWDYSKG----KCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp TCCEEEEECCSSCCCEEEEEEC---------TTSSEEEEE-ETTTEEEEEETTTT----EEEEEECSSCCSSSCCCEEEE
T ss_pred CCceeeEEeccCCCceEEEEEC---------CCCCEEEEE-cCCCeEEEEECCCC----cEEEEEEecCCceEEEEEEEE
Confidence 6665544322 22233333332 23 344444 33478888887654 2222222211 11233445
Q ss_pred cCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeC-CCCeEEEEEeC
Q psy14258 365 EKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDA-GIGTINVAKIS 429 (440)
Q Consensus 365 ~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~-~~~~I~~~~~~ 429 (440)
..++.++++-...+.|+..++........+...-..+..+++.+.+..|.-+.. ..++|.+-+.+
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 455666677667888988888765443333434466788999987766655532 45677766543
No 191
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=97.65 E-value=0.072 Score=54.47 Aligned_cols=317 Identities=10% Similarity=-0.014 Sum_probs=168.4
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEec
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTH 158 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~ 158 (440)
+..++|++.++.|..... +.|...++...... ..+...-..... |+.+.++.|--. +.|.+-++
T Consensus 21 ~~~~~~spdg~~l~~~~~--~~v~l~~~~~~~~~----------~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~ 88 (611)
T 1nr0_A 21 AVVLGNTPAGDKIQYCNG--TSVYTVPVGSLTDT----------EIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDT 88 (611)
T ss_dssp CCCCEECTTSSEEEEEET--TEEEEEETTCSSCC----------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEES
T ss_pred eeEEeeCCCCCEEEeCCC--CEEEEecCCCcccC----------eEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeEC
Confidence 777888888877776653 35544444311111 112233344566 787766544333 67888887
Q ss_pred C-Cce-EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC-CCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEe
Q psy14258 159 Y-MEH-CMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT-RPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVD 235 (440)
Q Consensus 159 d-g~~-~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~-~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d 235 (440)
. +.. ....+........+++.+|...+|.-+..+.. ...|...+. |.....+ ...-...+.+++.+.+..++.+-
T Consensus 89 ~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l-~gh~~~v~~v~f~p~~~~~l~s~ 166 (611)
T 1nr0_A 89 TQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGNL-TGQARAMNSVDFKPSRPFRIISG 166 (611)
T ss_dssp SSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBCC-CCCSSCEEEEEECSSSSCEEEEE
T ss_pred CCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCccee-cCCCCCceEEEECCCCCeEEEEE
Confidence 4 222 12222333456889999996555555443321 023444332 2222222 22234567888887666545554
Q ss_pred CCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEec--------CCCCeEE
Q psy14258 236 TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIAN--------FSRPFAI 306 (440)
Q Consensus 236 ~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~--------~~~p~~~ 306 (440)
...+.|..-+...........+ .......+++..+ .++.+-...+.|...+..+++....+.. ......+
T Consensus 167 s~D~~v~lwd~~~~~~~~~l~~-H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v 245 (611)
T 1nr0_A 167 SDDNTVAIFEGPPFKFKSTFGE-HTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGL 245 (611)
T ss_dssp ETTSCEEEEETTTBEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEE
T ss_pred eCCCeEEEEECCCCeEeeeecc-ccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEE
Confidence 5566676666433222222222 1334677887755 5666666678888778766665544421 1122333
Q ss_pred EEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC--CCCceEEEEEcCCCEEEEEECCCCeEEEEe
Q psy14258 307 HIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD--LKRPSVIDYHEKEEYIYYAELTSYVIERRK 384 (440)
Q Consensus 307 ~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~--~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~ 384 (440)
.+. |++.++++-+..+.|+..++... .. ...++... .....++.+ .++ ..++-...+.|...+
T Consensus 246 ~~s----------pdg~~l~s~s~D~~v~lWd~~~~-~~-~~~~~~~~~~~~~~~~~~~--~~~-~l~s~s~d~~i~~~~ 310 (611)
T 1nr0_A 246 TWS----------PDGTKIASASADKTIKIWNVATL-KV-EKTIPVGTRIEDQQLGIIW--TKQ-ALVSISANGFINFVN 310 (611)
T ss_dssp EEC----------TTSSEEEEEETTSEEEEEETTTT-EE-EEEEECCSSGGGCEEEEEE--CSS-CEEEEETTCCEEEEE
T ss_pred EEC----------CCCCEEEEEeCCCeEEEEeCCCC-ce-eeeecCCCCccceeEEEEE--cCC-EEEEEeCCCcEEEEe
Confidence 332 34444454445578888887654 11 01111111 012234444 233 344545667777777
Q ss_pred cCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 385 MFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 385 ~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+............-..+..|++.+.++.|+-+. ..++|.+.++..
T Consensus 311 ~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 311 PELGSIDQVRYGHNKAITALSSSADGKTLFSAD-AEGHINSWDIST 355 (611)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTT
T ss_pred CCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCC
Confidence 665433333333445688999998777666554 456788888764
No 192
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.65 E-value=0.039 Score=51.36 Aligned_cols=273 Identities=10% Similarity=-0.019 Sum_probs=149.2
Q ss_pred EEEEEeeec---ccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEE
Q psy14258 83 AIYFCTHYM---EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIY 154 (440)
Q Consensus 83 ~~~i~~d~~---~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~ 154 (440)
+.++++.+. .+.+..+-...+.|+..++........ ..+...-..... ++.+... +..+ +.|.
T Consensus 35 V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~--------~~l~gh~~~v~~~~~~~~~~-~l~s~s~D~~i~ 105 (321)
T 3ow8_A 35 IWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQ--------WSLEGHQLGVVSVDISHTLP-IAASSSLDAHIR 105 (321)
T ss_dssp EEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEE--------EEECCCSSCEEEEEECSSSS-EEEEEETTSEEE
T ss_pred EEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeee--------eeeccCCCCEEEEEECCCCC-EEEEEeCCCcEE
Confidence 788888653 234566666666666555542221100 001111222333 4443333 3333 6788
Q ss_pred EEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEE
Q psy14258 155 FCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWV 234 (440)
Q Consensus 155 ~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~ 234 (440)
+-++....+...+.........+++.|...+|...... +.|...++........+...-.....+++.+.+..|..+
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~d---g~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg 182 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHV---GKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASG 182 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTT---SEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCC---CcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEE
Confidence 88887655544444444567789999965545444333 588888887655444444444456789999777776665
Q ss_pred eCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccC
Q psy14258 235 DTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQ 312 (440)
Q Consensus 235 d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~ 312 (440)
. ..+.|...++..........+. ......+++..+ .++.+-...+.|...+..+++....+..-. ....+.+.
T Consensus 183 ~-~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s--- 257 (321)
T 3ow8_A 183 A-IDGIINIFDIATGKLLHTLEGH-AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC--- 257 (321)
T ss_dssp E-TTSCEEEEETTTTEEEEEECCC-SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC---
T ss_pred c-CCCeEEEEECCCCcEEEEEccc-CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC---
Confidence 4 4567888887544332222221 223467777654 555665667788877876665544443322 23344433
Q ss_pred CCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEe
Q psy14258 313 KQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRK 384 (440)
Q Consensus 313 ~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~ 384 (440)
|++.++++-+..+.|+..++... .....+.+ -....+++|.+.+..|. +-...+.|..-+
T Consensus 258 -------p~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~h~~~v~~v~~s~~g~~l~-s~~~d~~i~vwd 318 (321)
T 3ow8_A 258 -------PDDTHFVSSSSDKSVKVWDVGTR----TCVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHIYD 318 (321)
T ss_dssp -------TTSSEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEECTTSSEEE-EEETTCCEEEEE
T ss_pred -------CCCCEEEEEeCCCcEEEEeCCCC----EEEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCeEEEEe
Confidence 34334444444578888887654 22222222 23456899998777654 433455665443
No 193
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.62 E-value=0.029 Score=54.61 Aligned_cols=240 Identities=8% Similarity=0.039 Sum_probs=145.2
Q ss_pred ccccce-eeeecCCcEEEe----ceEEEEecCC-----------ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCC
Q psy14258 133 LLDGTE-RFPMVTHKIVYP----EAIYFCTHYM-----------EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRP 196 (440)
Q Consensus 133 ~~~p~~-avD~~~~~lY~~----~~I~~~~~dg-----------~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~ 196 (440)
...+.. ++.+.+++++.+ +.|.+.++.. .....+ ......+.+|+.+|....++.+-... +
T Consensus 128 ~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~d--g 204 (430)
T 2xyi_A 128 EGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRL-RGHQKEGYGLSWNPNLNGYLLSASDD--H 204 (430)
T ss_dssp SSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEE-ECCSSCCCCEEECTTSTTEEEEECTT--S
T ss_pred CCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEe-cCCCCCeEEEEeCCCCCCeEEEEeCC--C
Confidence 345666 776654556655 6788888764 222222 23445689999999655244444333 5
Q ss_pred cEEEEeCCCCCc--e-----eEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC----CcEEEecCCccCceee
Q psy14258 197 MLERSLLDGTER--F-----PMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT----DRKTIRKGFPVQNLYD 265 (440)
Q Consensus 197 ~I~r~~~dG~~~--~-----~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~----~~~~i~~~~~~~~p~g 265 (440)
.|...++..... . ......-.....+++.+.++.++.+....+.|...++... ....+... -..+..
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~--~~~v~~ 282 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH--TAEVNC 282 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC--SSCEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC--CCCeEE
Confidence 888888875221 1 1111223457789998877888888778889999998643 23333222 345677
Q ss_pred eeEecC--EEEEEecCCCeEEEEeccCC-CceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcC
Q psy14258 266 ITVFEN--NLFVTSWRNQSIIRVNKFNS-DDYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFK 340 (440)
Q Consensus 266 l~~~~~--~ly~td~~~~~i~~~~~~~g-~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~ 340 (440)
+++..+ +++++-...+.|...+..+. .....+..-. ....+.+. |+ .+++++.+..+.|...++.
T Consensus 283 i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~s----------p~~~~~l~s~~~d~~i~iwd~~ 352 (430)
T 2xyi_A 283 LSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWS----------PHNETILASSGTDRRLHVWDLS 352 (430)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEEC----------SSCTTEEEEEETTSCCEEEEGG
T ss_pred EEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEEC----------CCCCCEEEEEeCCCcEEEEeCC
Confidence 887643 57877777888888887663 3334443222 33445443 33 3556655555788888887
Q ss_pred CCCCC----------ceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 341 RDGTT----------EQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 341 ~~~~~----------~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
..+.. ........+ -..+..+++++.+..++++-...+.|...+++.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 353 KIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 63110 012222222 235789999998775777777788887777653
No 194
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.58 E-value=0.048 Score=50.51 Aligned_cols=239 Identities=10% Similarity=0.061 Sum_probs=137.6
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC----ceeEEecCccCceEEEEeCCCC-EEEEEeCCCCcEEEEEc
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE----RFPMVTHKIVYPYGVTVDFPTK-HVYWVDTYLDFIDRINY 246 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~----~~~l~~~~~~~P~gl~vD~~~~-~ly~~d~~~~~i~~~~~ 246 (440)
....++++.|...+|+.+... +.|...+++... ...+. ..-.....+++.+.+. .|+.+. ..+.|...++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d---~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~~wd~ 86 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWD---GSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGT-VQGEILKVDL 86 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETT---SEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEE-TTSCEEEECS
T ss_pred CcEEEEEEcCCCCEEEEEcCC---CeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEc-CCCeEEEEEe
Confidence 457789999855555555544 577777776554 22222 2234577889987776 666665 5678988888
Q ss_pred -cCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccC---------CCceEEEecCCCCeEEEEeccCCCCC
Q psy14258 247 -DGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFN---------SDDYETIANFSRPFAIHIYHRQKQPD 316 (440)
Q Consensus 247 -dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~---------g~~~~~~~~~~~p~~~~v~~~~~qp~ 316 (440)
.+.....+.....-.....+++..+.++++-...+.|...+..+ ++....+.....+..+.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~------- 159 (342)
T 1yfq_A 87 IGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTN------- 159 (342)
T ss_dssp SSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEEC-------
T ss_pred ccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEec-------
Confidence 76655444320013345677776444444444567777777654 3222222211123334332
Q ss_pred CCCCceeEEeecCCccEEEEEEcCC-CCCCceeeeeecCCCCceEEEEEc-CCCEEEEEECCCCeEEEEecCCC------
Q psy14258 317 ALKPSTFLLYAKGKPAIIKGLTFKR-DGTTEQAIMPITDLKRPSVIDYHE-KEEYIYYAELTSYVIERRKMFGR------ 388 (440)
Q Consensus 317 ~~~~~~~l~~~~~~~~~I~~i~~~~-~~~~~~~~~~~~~~~~p~~l~~d~-~~~~vy~~d~~~~~I~r~~~~g~------ 388 (440)
++. ++.+. ..+.|..+++.. . ...........-..+..+++.+ .++.++.+. ..+.|...+++..
T Consensus 160 ---~~~-l~~~~-~d~~i~i~d~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 160 ---SSR-LIVGM-NNSQVQWFRLPLCE-DDNGTIEESGLKYQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNS 232 (342)
T ss_dssp ---SSE-EEEEE-STTEEEEEESSCCT-TCCCEEEECSCSSCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTC
T ss_pred ---CCc-EEEEe-CCCeEEEEECCccc-cccceeeecCCCCceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCccccc
Confidence 344 44443 337888888876 3 2111112222233567899998 777555544 5778877666543
Q ss_pred CeEEEEECCC---------CCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 389 GKEVVIDTGI---------YNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 389 ~~~~~~~~~~---------~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.....+.... ..+..+++.+.++.|+... ..+.|.+.++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~ 282 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQT 282 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTT
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCcc
Confidence 2222333222 2688899988777665554 467899999874
No 195
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.57 E-value=0.061 Score=51.57 Aligned_cols=316 Identities=6% Similarity=-0.037 Sum_probs=173.1
Q ss_pred EEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEecCC
Q psy14258 85 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYM 160 (440)
Q Consensus 85 ~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg 160 (440)
+++|++.++.|+....+ +.|+..++....... . + ..-..... ++.+.++.|..+ +.|.+.++..
T Consensus 61 ~~~~s~~g~~l~~~~~d-~~v~i~d~~~~~~~~--------~--~-~~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 61 GNTFEKVGSHLYKARLD-GHDFLFNTIIRDGSK--------M--L-KRADYTAVDTAKLQMRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp TCEEEEEETTEEEEEET-TEEEEEECCSEETTT--------T--S-CSCCEEEEEEECSSSCEEEEEETTSCEEEECTTS
T ss_pred ceeeeecCCeEEEEEcC-CcEEEEEecccceee--------E--E-ecCCceEEEEEecCCCEEEEEECCCCEEEEeCCC
Confidence 56788887777766654 556555543222110 0 1 11111122 333344433333 6798989887
Q ss_pred ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCc
Q psy14258 161 EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDF 240 (440)
Q Consensus 161 ~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~ 240 (440)
...............++++.|...+|+.+... +.|...+++.......+...-.....+++.+.+..|+.+. ..+.
T Consensus 129 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~d~~ 204 (420)
T 3vl1_A 129 NLQREIDQAHVSEITKLKFFPSGEALISSSQD---MQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS-LDGT 204 (420)
T ss_dssp CEEEEETTSSSSCEEEEEECTTSSEEEEEETT---SEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE-TTSC
T ss_pred cceeeecccccCccEEEEECCCCCEEEEEeCC---CeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc-CCCc
Confidence 76665554555778999999965555554443 5888888865444333343345678899998777777554 4567
Q ss_pred EEEEEccCCCcEEEecC-C-ccCceee---------------------eeEec-CEEEEEecCCCeEEEEeccCCCceEE
Q psy14258 241 IDRINYDGTDRKTIRKG-F-PVQNLYD---------------------ITVFE-NNLFVTSWRNQSIIRVNKFNSDDYET 296 (440)
Q Consensus 241 i~~~~~dG~~~~~i~~~-~-~~~~p~g---------------------l~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~ 296 (440)
|...++........... . ....... +++.. +.+.++-...+.|...+..+++....
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 284 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQ 284 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEE
Confidence 88777754333222221 0 0111122 22222 24444445577788888776665544
Q ss_pred Eec-CC-CCeEEEEeccCCCCCCCCCcee-EEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEE
Q psy14258 297 IAN-FS-RPFAIHIYHRQKQPDALKPSTF-LLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYA 373 (440)
Q Consensus 297 ~~~-~~-~p~~~~v~~~~~qp~~~~~~~~-l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~ 373 (440)
+.. .. ....+.+. |++. ++++-+..+.|+..++... ...-..+....-.....+.+. ++.++++
T Consensus 285 ~~~~~~~~v~~~~~~----------~~~~~~l~~g~~dg~i~vwd~~~~-~~~~~~~~~~~~~~v~~~~~~--~~~~l~s 351 (420)
T 3vl1_A 285 LPSKFTCSCNSLTVD----------GNNANYIYAGYENGMLAQWDLRSP-ECPVGEFLINEGTPINNVYFA--AGALFVS 351 (420)
T ss_dssp ECCTTSSCEEEEEEC----------SSCTTEEEEEETTSEEEEEETTCT-TSCSEEEEESTTSCEEEEEEE--TTEEEEE
T ss_pred cccccCCCceeEEEe----------CCCCCEEEEEeCCCeEEEEEcCCC-cCchhhhhccCCCCceEEEeC--CCCEEEE
Confidence 332 22 23344433 2322 4444344588998988665 111112222122233455554 3556677
Q ss_pred ECCCCeEEEEecCCC---------CeEEEEECCCCCeeeEEEecCCC---cEEEEeCCCCeEEEEEeCC
Q psy14258 374 ELTSYVIERRKMFGR---------GKEVVIDTGIYNVEGMAVDWMAN---NLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 374 d~~~~~I~r~~~~g~---------~~~~~~~~~~~~~~glAvD~~~~---~lYwtd~~~~~I~~~~~~g 430 (440)
-...++|+..++... .....+...-..+..+++.+.+. .|+.+.. .+.+.+.++..
T Consensus 352 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~-~g~~~~~~~~~ 419 (420)
T 3vl1_A 352 SGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK-NNFCALYNLSN 419 (420)
T ss_dssp ETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET-TTEEEEEESCC
T ss_pred ecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC-CceEEEEeccC
Confidence 777888888877642 11122233445778899988776 5666643 56787777653
No 196
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.54 E-value=1.9e-05 Score=55.87 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=31.1
Q ss_pred eeecccCCC-CCCCCCCcccCCC-ceEEc-cCCeeeec
Q psy14258 11 CVDADECLI-DGSCDQTCTNTHL-SYTYT-DEGFSFQG 45 (440)
Q Consensus 11 C~d~~~C~~-~~~Cs~~C~n~~~-~~~C~-~~g~~l~~ 45 (440)
++|++||.. ++.|+|.|.|+++ +|.|. +.||.|.+
T Consensus 2 ~~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~ 39 (69)
T 1kli_L 2 KDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA 39 (69)
T ss_dssp CSCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECT
T ss_pred CcccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECC
Confidence 468999984 6899999999999 89999 99999865
No 197
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.54 E-value=0.06 Score=50.92 Aligned_cols=267 Identities=6% Similarity=-0.062 Sum_probs=138.6
Q ss_pred ccceeeeEEEecCCCcee--e--eeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeec
Q psy14258 56 AFWEECFGPMDIEEWDEG--L--SFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLER 131 (440)
Q Consensus 56 ~~~~~~I~~~~l~~~~~~--~--~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~ 131 (440)
++|.++|+..+....... + ........+.+++|.+.+ ++..+. ..+.|+..++........ .......
T Consensus 66 ~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-~~l~~s-~dg~v~lWd~~~~~~~~~------~~~~~~~ 137 (357)
T 4g56_B 66 RTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-GILVAS-DSGAVELWEILEKESLLV------NKFAKYE 137 (357)
T ss_dssp SSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-EEEEEE-TTSCEEEC--------CC------CCEEECC
T ss_pred ccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-CEEEEE-CCCEEEEeeccccceeEE------EeeccCC
Confidence 356666776655332221 1 111111228999999874 444443 446665444432111000 0000111
Q ss_pred cccccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC
Q psy14258 132 SLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE 207 (440)
Q Consensus 132 ~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~ 207 (440)
.-..+.. ++.+.++.|.-+ +.|.+.++....+...+........++++.+....++.+-... +.|...++....
T Consensus 138 h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~d--g~v~~wd~~~~~ 215 (357)
T 4g56_B 138 HDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGED--GRILLWDTRKPK 215 (357)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETT--SCEEECCTTSSS
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccC--CceEEEECCCCc
Confidence 1233556 776666655444 6788888887665555554556788999988665666665443 577777765433
Q ss_pred ceeEEe--cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec--CEEEEEecCCCeE
Q psy14258 208 RFPMVT--HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSI 283 (440)
Q Consensus 208 ~~~l~~--~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i 283 (440)
...... ..-..+..+++.+.++.++.+-...+.|...++..........+. ......+++.. ..+..+-...+.|
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~-~~~v~~l~~sp~~~~~lasgs~D~~i 294 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH-SQNITGLAYSYHSSPFLASISEDCTV 294 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC-SSCEEEEEECSSSSCCEEEEETTSCE
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc-ceeEEEEEEcCCCCCEEEEEeCCCEE
Confidence 222211 122347788998777777766556678888887544332222321 23456777753 3455555556778
Q ss_pred EEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC
Q psy14258 284 IRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 284 ~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~ 342 (440)
...+..+++....+.......++++ +|. ++.++++-+..+.|+..++...
T Consensus 295 ~iwd~~~~~~~~~~~H~~~V~~vaf-sP~--------d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 295 AVLDADFSEVFRDLSHRDFVTGVAW-SPL--------DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp EEECTTSCEEEEECCCSSCEEEEEE-CSS--------STTEEEEEETTSCEEEEECC--
T ss_pred EEEECCCCcEeEECCCCCCEEEEEE-eCC--------CCCEEEEEcCCCeEEEEECCCC
Confidence 7777766644333322223344433 211 2334444444467777776544
No 198
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.50 E-value=1.8e-05 Score=61.72 Aligned_cols=43 Identities=33% Similarity=0.672 Sum_probs=8.4
Q ss_pred ceecCCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeee
Q psy14258 2 TFRGPNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~ 44 (440)
||.+.+++.|+|++||..+..|.+.|.|++++|.|. +.||.+.
T Consensus 57 Gy~g~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 57 GFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp TCEEETTTEEEC--------------------------------
T ss_pred CccccCCCccccccccCCCCCcCCeeecCCCCEEEECCCCceEC
Confidence 555556678998999986677888898888889998 8888764
No 199
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.49 E-value=0.064 Score=49.89 Aligned_cols=257 Identities=7% Similarity=-0.020 Sum_probs=149.1
Q ss_pred ceEEEEecCCceEEE--EEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCC
Q psy14258 151 EAIYFCTHYMEHCMI--AIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPT 228 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~--~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~ 228 (440)
+.|.+-+++...... .+........++++.+.. .+..+-... +.|...++........+...-.....+++.+.+
T Consensus 58 ~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s~D--~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg 134 (321)
T 3ow8_A 58 DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTL-PIAASSSLD--AHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS 134 (321)
T ss_dssp SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSS-SEEEEEETT--SEEEEEETTTTEEEEEEECCTTCCCCEEECTTS
T ss_pred CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCC-CEEEEEeCC--CcEEEEECCCCCEEEEEeCCCccEEEEEECCCC
Confidence 566666665543322 223344567788888854 444443332 578888876543333333333345678998776
Q ss_pred CEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEE
Q psy14258 229 KHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAI 306 (440)
Q Consensus 229 ~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~ 306 (440)
..|..+ ...+.|...++............ ......+++..+ ....+-...+.|...+..+++....+..-. ....+
T Consensus 135 ~~l~~g-~~dg~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 212 (321)
T 3ow8_A 135 QYLATG-THVGKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSL 212 (321)
T ss_dssp SEEEEE-CTTSEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEE
T ss_pred CEEEEE-cCCCcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEE
Confidence 666554 45678888887655443333321 234567777654 444444457788888877776555554322 23444
Q ss_pred EEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 307 HIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 307 ~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
.+. |++.++++-+..+.|+..++... .....+.+ ......++|.+.+..++ +-...++|..-++
T Consensus 213 ~~s----------pd~~~l~s~s~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~sp~~~~l~-s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 213 TFS----------PDSQLLVTASDDGYIKIYDVQHA----NLAGTLSGHASWVLNVAFCPDDTHFV-SSSSDKSVKVWDV 277 (321)
T ss_dssp EEC----------TTSCEEEEECTTSCEEEEETTTC----CEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEET
T ss_pred EEc----------CCCCEEEEEcCCCeEEEEECCCc----ceeEEEcCCCCceEEEEECCCCCEEE-EEeCCCcEEEEeC
Confidence 433 34334444444578888887655 22222332 23456899999877654 4456788888888
Q ss_pred CCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 386 FGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 386 ~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
........+...-..+.++++.+.+..|. +-...++|.+.+.
T Consensus 278 ~~~~~~~~~~~h~~~v~~v~~s~~g~~l~-s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 278 GTRTCVHTFFDHQDQVWGVKYNGNGSKIV-SVGDDQEIHIYDC 319 (321)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEE-EEETTCCEEEEEC
T ss_pred CCCEEEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCeEEEEeC
Confidence 75433222333446788999987666554 4444567777653
No 200
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.49 E-value=0.068 Score=50.06 Aligned_cols=241 Identities=6% Similarity=-0.100 Sum_probs=137.4
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC--ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE--RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~--~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
.....+++.|...+|+..... +.|...++++.. ....+...-.....+++.+.+..|+.+. ..+.|...++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d---~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNN---HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCG-TDRNAYVWTLKGR 84 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSS---SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEE-TTSCEEEEEEETT
T ss_pred CCeEEEEECCCCCEEEEEeCC---CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEc-CCCeEEEEECCCC
Confidence 457789999854445544333 588888887664 2222333344578899998777777665 4567888877655
Q ss_pred CcEEEec-CCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEe----cCC-CCeEEEEeccCCCCCCCCCc
Q psy14258 250 DRKTIRK-GFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIA----NFS-RPFAIHIYHRQKQPDALKPS 321 (440)
Q Consensus 250 ~~~~i~~-~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~----~~~-~p~~~~v~~~~~qp~~~~~~ 321 (440)
....... .........+++..+ .|+... .++.|...+...++...... ... ....+.+. |+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~ 153 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGS-GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH----------PN 153 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEE-TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC----------TT
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEe-CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc----------CC
Confidence 4322221 111334667777644 444444 46667666665555422221 111 23344333 23
Q ss_pred eeEEeecCCccEEEEEEcCCCC--------------CCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 322 TFLLYAKGKPAIIKGLTFKRDG--------------TTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 322 ~~l~~~~~~~~~I~~i~~~~~~--------------~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+.++++-+..+.|+.+++.... ........+.. -....++++++.++.++.+. ..+.|+..++.
T Consensus 154 ~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 232 (372)
T 1k8k_C 154 SVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADAD 232 (372)
T ss_dssp SSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGG
T ss_pred CCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECC
Confidence 2233333334778888764210 01112222222 23467899999887666554 67889999987
Q ss_pred CCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 387 GRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 387 g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.......+...-..+..+++.+.+..| .+- ..+.|.+.+++.
T Consensus 233 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 233 KKMAVATLASETLPLLAVTFITESSLV-AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp GTTEEEEEECSSCCEEEEEEEETTEEE-EEE-TTSSCEEEEEET
T ss_pred CCceeEEEccCCCCeEEEEEecCCCEE-EEE-eCCeEEEEEccC
Confidence 544444444444567899999766533 343 567888888764
No 201
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.46 E-value=0.079 Score=50.20 Aligned_cols=288 Identities=8% Similarity=-0.061 Sum_probs=153.8
Q ss_pred eEEEEEeee-cccEEEEEEcCCCCceeEEeCCCCCcceeeccccccc---eeeccccccce-eeeecCCcEEEe----ce
Q psy14258 82 EAIYFCTHY-MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRP---MLERSLLDGTE-RFPMVTHKIVYP----EA 152 (440)
Q Consensus 82 ~~~~i~~d~-~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~p~~-avD~~~~~lY~~----~~ 152 (440)
.+.++++++ .++.| ++-...+.|...++................. ........+.. ++.+.+++++++ +.
T Consensus 45 ~v~~~~~s~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~ 123 (408)
T 4a11_B 45 GINTLDIEPVEGRYM-LSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKT 123 (408)
T ss_dssp CEEEEEECTTTCCEE-EEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSE
T ss_pred cEEEEEEecCCCCEE-EEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCe
Confidence 389999998 54444 4444457777766654332211000000000 00012223444 555534545555 68
Q ss_pred EEEEecCCceEEEEEcCCCCCceEEEEcCCCC---eEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCC
Q psy14258 153 IYFCTHYMEHCMIAIDLNLSKPRGIALDPTSG---YMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTK 229 (440)
Q Consensus 153 I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g---~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~ 229 (440)
|.+.+++......... .......+++.+... .++..... +.|...++........+...-.....+++.+.+.
T Consensus 124 i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 124 LKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRG---PKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESS---SSEEEEESSSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred EEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCC---CeEEEEeCCCcceeeeecCCCCcEEEEEECCCCC
Confidence 9999988766655444 335577888877533 44444433 5888888875544434433344567899988777
Q ss_pred EEEEEeCCCCcEEEEEccCCC--cEEEec-------------CCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCc
Q psy14258 230 HVYWVDTYLDFIDRINYDGTD--RKTIRK-------------GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDD 293 (440)
Q Consensus 230 ~ly~~d~~~~~i~~~~~dG~~--~~~i~~-------------~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~ 293 (440)
.++++-...+.|...++.... ...+.. .........+++..+ ...++-..++.|...+..+++.
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 666665567788888875432 122110 001223466777654 3334444567777777766654
Q ss_pred eEEEecCC---CCeE--EEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCC
Q psy14258 294 YETIANFS---RPFA--IHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKE 367 (440)
Q Consensus 294 ~~~~~~~~---~p~~--~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~ 367 (440)
........ .... +.... .....+++.+.. +.|...++... .....+.+ .....+++|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~--~~i~v~d~~~~----~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 280 TLVNYGKVCNNSKKGLKFTVSC-------GCSSEFVFVPYG--STIAVYTVYSG----EQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp CCCCCCCCCCCCSSCCCCEECC-------SSSSCEEEEEET--TEEEEEETTTC----CEEEEECCCSSCEEEEEEETTT
T ss_pred ceeccccccccccccceeEEec-------CCCceEEEEecC--CEEEEEECcCC----cceeeeccCCCeEEEEEEcCCC
Confidence 33221100 0001 11110 001234444444 78888887654 22223332 2345689999988
Q ss_pred CEEEEEECCCCeEEEEecCCC
Q psy14258 368 EYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 368 ~~vy~~d~~~~~I~r~~~~g~ 388 (440)
..|+ +-...+.|..-++...
T Consensus 347 ~~l~-s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 347 QELY-SGSRDCNILAWVPSLY 366 (408)
T ss_dssp TEEE-EEETTSCEEEEEECC-
T ss_pred CEEE-EECCCCeEEEEeCCCC
Confidence 7665 4446788888888753
No 202
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.38 E-value=0.11 Score=49.84 Aligned_cols=296 Identities=7% Similarity=-0.061 Sum_probs=151.2
Q ss_pred eEEEecCCCceeeeeecccceEEEE-EeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-e
Q psy14258 62 FGPMDIEEWDEGLSFLTFAQEAIYF-CTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-R 139 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~~~~~~~~i-~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-a 139 (440)
|+..++........+.... +..+ .+.+..+. +.+-...+.|...++...... ..+......+.. +
T Consensus 80 v~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~-l~~~~~dg~i~iwd~~~~~~~----------~~~~~h~~~v~~~~ 146 (420)
T 3vl1_A 80 DFLFNTIIRDGSKMLKRAD--YTAVDTAKLQMRR-FILGTTEGDIKVLDSNFNLQR----------EIDQAHVSEITKLK 146 (420)
T ss_dssp EEEEECCSEETTTTSCSCC--EEEEEEECSSSCE-EEEEETTSCEEEECTTSCEEE----------EETTSSSSCEEEEE
T ss_pred EEEEEecccceeeEEecCC--ceEEEEEecCCCE-EEEEECCCCEEEEeCCCccee----------eecccccCccEEEE
Confidence 6666665443322222222 4444 34544444 444444566655544322110 011122334555 6
Q ss_pred eeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec--
Q psy14258 140 FPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH-- 214 (440)
Q Consensus 140 vD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~-- 214 (440)
+.+.++.|+.+ +.|.+.++........+........++++.|...+|+.+... +.|...++........+..
T Consensus 147 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~~ 223 (420)
T 3vl1_A 147 FFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLD---GTIRLWECGTGTTIHTFNRKE 223 (420)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETT---SCEEEEETTTTEEEEEECBTT
T ss_pred ECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCC---CcEEEeECCCCceeEEeecCC
Confidence 66666655544 689998987544333334455678899999965556655544 4788777764332222221
Q ss_pred -Cc---------------------cCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-
Q psy14258 215 -KI---------------------VYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN- 271 (440)
Q Consensus 215 -~~---------------------~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~- 271 (440)
.. .....+++++.+..|+ +-...+.|...++...................+++..+
T Consensus 224 ~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 302 (420)
T 3vl1_A 224 NPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVI-AGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNN 302 (420)
T ss_dssp BTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEE-EEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSC
T ss_pred CCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEE-EEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCC
Confidence 01 1122234454444444 44456778888876544333222211334677887755
Q ss_pred E-EEEEecCCCeEEEEeccCCCc-eEEEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCc--
Q psy14258 272 N-LFVTSWRNQSIIRVNKFNSDD-YETIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTE-- 346 (440)
Q Consensus 272 ~-ly~td~~~~~i~~~~~~~g~~-~~~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~-- 346 (440)
. ++++-...+.|...+..+++. ...+.. ...+.....+. +.. ++++-+..+.|+..++.......
T Consensus 303 ~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~---------~~~-~l~s~~~d~~v~iw~~~~~~~~~~~ 372 (420)
T 3vl1_A 303 ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYFA---------AGA-LFVSSGFDTSIKLDIISDPESERPA 372 (420)
T ss_dssp TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEEE---------TTE-EEEEETTTEEEEEEEECCTTCCSCE
T ss_pred CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEeC---------CCC-EEEEecCCccEEEEeccCCCCCccc
Confidence 2 555655678888888877654 333332 23333333332 123 44444445788888876541111
Q ss_pred ----eeeeeecCCCCceEEEEEcCCC---EEEEEECCCCeEEEEec
Q psy14258 347 ----QAIMPITDLKRPSVIDYHEKEE---YIYYAELTSYVIERRKM 385 (440)
Q Consensus 347 ----~~~~~~~~~~~p~~l~~d~~~~---~vy~~d~~~~~I~r~~~ 385 (440)
..............++|.+.+. .++.+. ..+.+...++
T Consensus 373 ~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g-~~g~~~~~~~ 417 (420)
T 3vl1_A 373 IEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG-KNNFCALYNL 417 (420)
T ss_dssp ECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE-TTTEEEEEES
T ss_pred eeccCccEEccCCcceEEEEEccCCCCcceEEEEc-CCceEEEEec
Confidence 1112222333556888888777 566554 3444544443
No 203
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=97.34 E-value=0.11 Score=49.21 Aligned_cols=243 Identities=6% Similarity=-0.116 Sum_probs=139.8
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC------ceeEEecCccCceEEEEeCC----C---CEEEEEeC
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE------RFPMVTHKIVYPYGVTVDFP----T---KHVYWVDT 236 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~------~~~l~~~~~~~P~gl~vD~~----~---~~ly~~d~ 236 (440)
......+|+++| .+|+-.... +.|...+++... ....+...-.....+++.+. + ..|+.+ .
T Consensus 15 h~~~i~~~~~~~--~~l~s~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~-~ 88 (397)
T 1sq9_A 15 HDADIFSVSACN--SFTVSCSGD---GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT-S 88 (397)
T ss_dssp SSSCEEEEEECS--SEEEEEETT---SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE-E
T ss_pred hhcCeEEEEecC--CeEEEEcCC---CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE-c
Confidence 345678899988 555554443 588888887765 22222223344677888765 4 445444 4
Q ss_pred CCCcEEEEEccCCC------cEEEecCCc---cCceeeeeEe----cC-EE-EEEecCCCeEEEEeccC------CCceE
Q psy14258 237 YLDFIDRINYDGTD------RKTIRKGFP---VQNLYDITVF----EN-NL-FVTSWRNQSIIRVNKFN------SDDYE 295 (440)
Q Consensus 237 ~~~~i~~~~~dG~~------~~~i~~~~~---~~~p~gl~~~----~~-~l-y~td~~~~~i~~~~~~~------g~~~~ 295 (440)
..+.|...++.... ...+..... -.....+++. .+ .. +++-..++.|...+..+ ++...
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 168 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN 168 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTC
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceee
Confidence 56778888876554 233322100 1456778877 33 33 44444567777666655 33332
Q ss_pred -----EEec--------CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-------C
Q psy14258 296 -----TIAN--------FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-------L 355 (440)
Q Consensus 296 -----~~~~--------~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-------~ 355 (440)
.+.. ...+..+.+. |++ ++++-...+.|+.+++... .....+.. -
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~i~~~~~~----------~~~-~l~~~~~dg~i~i~d~~~~----~~~~~~~~~~~h~~~~ 233 (397)
T 1sq9_A 169 WSPTLELQGTVESPMTPSQFATSVDIS----------ERG-LIATGFNNGTVQISELSTL----RPLYNFESQHSMINNS 233 (397)
T ss_dssp CCCEEEEEEEECCSSSSCCCCCEEEEC----------TTS-EEEEECTTSEEEEEETTTT----EEEEEEECCC---CCC
T ss_pred ccCcceeeeeeccccCCCCCceEEEEC----------CCc-eEEEEeCCCcEEEEECCCC----ceeEEEeccccccccC
Confidence 2211 1123333333 455 5555455588988888654 23333333 3
Q ss_pred CCceEEEEEcCCCEEEEEECCC---CeEEEEecCCCCeEEEEEC-------------CCCCeeeEEEecCCCcEEEEeCC
Q psy14258 356 KRPSVIDYHEKEEYIYYAELTS---YVIERRKMFGRGKEVVIDT-------------GIYNVEGMAVDWMANNLYWTDAG 419 (440)
Q Consensus 356 ~~p~~l~~d~~~~~vy~~d~~~---~~I~r~~~~g~~~~~~~~~-------------~~~~~~glAvD~~~~~lYwtd~~ 419 (440)
.....+++++.+..++.+. .. +.|+..++........+.. .-..+..+++.+.++.|+ +-..
T Consensus 234 ~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~ 311 (397)
T 1sq9_A 234 NSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAGW 311 (397)
T ss_dssp CCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE-EEET
T ss_pred CccceEEECCCCCEEEEEe-cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE-EEeC
Confidence 4567999999888666554 44 7898888875433333332 345678899987666554 4445
Q ss_pred CCeEEEEEeCCCeeeE
Q psy14258 420 IGTINVAKISDFSIRK 435 (440)
Q Consensus 420 ~~~I~~~~~~g~~~~~ 435 (440)
.+.|.+.++...+...
T Consensus 312 dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 312 DGKLRFWDVKTKERIT 327 (397)
T ss_dssp TSEEEEEETTTTEEEE
T ss_pred CCeEEEEEcCCCceeE
Confidence 7889999987534333
No 204
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=97.33 E-value=7.8e-05 Score=49.83 Aligned_cols=34 Identities=32% Similarity=0.630 Sum_probs=29.8
Q ss_pred eecccCCC---------CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLI---------DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~---------~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+|++||.. ++.|.+.|.|++|+|.|. +.||.+..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECC
Confidence 58899986 378999999999999999 99998754
No 205
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.31 E-value=0.23 Score=52.04 Aligned_cols=279 Identities=9% Similarity=-0.003 Sum_probs=151.9
Q ss_pred ecccEEEEEEcCC----CCceeEEeC---CCCCcceeeccccccceeeccc-cccce-eeeecCCcEEEe--------ce
Q psy14258 90 YMEHCMIAIDLNL----SKPRGIALD---PTSGYMFFTKWGATRPMLERSL-LDGTE-RFPMVTHKIVYP--------EA 152 (440)
Q Consensus 90 ~~~~~ly~~d~~~----~~I~~~~~~---~~~~~~~~~~~~~~~v~~~~~~-~~p~~-avD~~~~~lY~~--------~~ 152 (440)
+.++++|++-... ..|++.... +...+.+... .. +..+. ....+ ++.+.++.|.++ ..
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~---~~--l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~ 190 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDP---NT--WAKDGATALDAWAASDDGRLLAYSVQDGGSDWRT 190 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECG---GG--CC----EEEEEEEECTTSSEEEEEEEETTCSEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECH---HH--hccCCCEEEEeEEECCCCCEEEEEEcCCCCceEE
Confidence 6678888776543 345666554 3322211000 00 11111 13445 777788878777 25
Q ss_pred EEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCC-----------CCcEEEEeCCCCCc-eeEEecCcc---
Q psy14258 153 IYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT-----------RPMLERSLLDGTER-FPMVTHKIV--- 217 (440)
Q Consensus 153 I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~-----------~~~I~r~~~dG~~~-~~l~~~~~~--- 217 (440)
|.+.++++........... ...+++..|. ..||++..... ..+|++.++.+... ..++...-.
T Consensus 191 i~v~dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~ 268 (741)
T 1yr2_A 191 VKFVGVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPK 268 (741)
T ss_dssp EEEEETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTT
T ss_pred EEEEECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCe
Confidence 8889998765433211111 1246778887 88888864321 24688888865442 233332211
Q ss_pred CceEEEEeCCCCEEEEEeC----CCCcEEEEEccCC--C-cEEEecCC-ccCceeeeeEecCEEEEEec---CCCeEEEE
Q psy14258 218 YPYGVTVDFPTKHVYWVDT----YLDFIDRINYDGT--D-RKTIRKGF-PVQNLYDITVFENNLFVTSW---RNQSIIRV 286 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~----~~~~i~~~~~dG~--~-~~~i~~~~-~~~~p~gl~~~~~~ly~td~---~~~~i~~~ 286 (440)
+-.++++.+.+..|+++-. ....|+.+++++. . .+.+.... ....| +.-+++.||+... .+..|+.+
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~--~~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF--VDGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE--EEEETTEEEEEECTTCTTCEEEEE
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE--EeccCCEEEEEECCCCCCCEEEEE
Confidence 3467889888888877653 2458999998776 4 55554421 11222 3456778877653 24679888
Q ss_pred eccCCC-c-eEEEecCCC-CeEEEEeccCCCCCCCCCceeEEeecC--CccEEEEEEcCCCCCCceeeeeecCCCCceEE
Q psy14258 287 NKFNSD-D-YETIANFSR-PFAIHIYHRQKQPDALKPSTFLLYAKG--KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVI 361 (440)
Q Consensus 287 ~~~~g~-~-~~~~~~~~~-p~~~~v~~~~~qp~~~~~~~~l~~~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l 361 (440)
+..++. . ..++..... ..++... ++.|+++.. ...+|+.+++++. ....+++.......++
T Consensus 347 d~~~~~~~~~~l~~~~~~~l~~~~~~-----------~~~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~~~~~~v~~~ 412 (741)
T 1yr2_A 347 DLSGSTPRFDTVVPESKDNLESVGIA-----------GNRLFASYIHDAKSQVLAFDLDGK---PAGAVSLPGIGSASGL 412 (741)
T ss_dssp ECSSSSCEEEEEECCCSSEEEEEEEE-----------BTEEEEEEEETTEEEEEEEETTSC---EEEECBCSSSCEEEEE
T ss_pred eCCCCccccEEEecCCCCeEEEEEEE-----------CCEEEEEEEECCEEEEEEEeCCCC---ceeeccCCCCeEEEEe
Confidence 876542 2 233332221 1223222 234554432 2356777776554 1112222233345577
Q ss_pred EEEcCCCEEEEEEC---CCCeEEEEecCCCCeE
Q psy14258 362 DYHEKEEYIYYAEL---TSYVIERRKMFGRGKE 391 (440)
Q Consensus 362 ~~d~~~~~vy~~d~---~~~~I~r~~~~g~~~~ 391 (440)
++++.++.++++-. .-.+|++.++.+...+
T Consensus 413 ~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~ 445 (741)
T 1yr2_A 413 SGRPGDRHAYLSFSSFTQPATVLALDPATAKTT 445 (741)
T ss_dssp ECCBTCSCEEEEEEETTEEEEEEEEETTTTEEE
T ss_pred ecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEE
Confidence 78887777776532 3468999998765433
No 206
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.28 E-value=0.23 Score=51.45 Aligned_cols=205 Identities=6% Similarity=-0.064 Sum_probs=121.9
Q ss_pred ceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEE
Q psy14258 81 QEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFC 156 (440)
Q Consensus 81 ~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~ 156 (440)
..+.++++++.+..+..+-...+.|+..++....... ......+...-..... ++.+.++.|.-+ +.|.+.
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-----GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS-----CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc-----ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 3489999988777788887777777766664322110 0000112233344556 777666645444 688888
Q ss_pred ecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC---ccCceEEEEeCCCC-EEE
Q psy14258 157 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK---IVYPYGVTVDFPTK-HVY 232 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~---~~~P~gl~vD~~~~-~ly 232 (440)
++....+...+........++++.|...+|.-.... +.|...+..+.....+.... ......+++.+... .++
T Consensus 458 d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D---~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 534 (694)
T 3dm0_A 458 DLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD---RTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTI 534 (694)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEE
T ss_pred ECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceE
Confidence 887655544444455678899999965555544443 47777777665444333221 22356788876542 344
Q ss_pred EEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCce
Q psy14258 233 WVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDY 294 (440)
Q Consensus 233 ~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~ 294 (440)
.+-...+.|...++..........+. ......+++..+ .+..+-...+.|...+..+++..
T Consensus 535 ~s~s~d~~v~vwd~~~~~~~~~~~~h-~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 535 VSASWDKTVKVWNLSNCKLRSTLAGH-TGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCC-SSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCC-CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 44455677888887665544333321 334567787754 55666666778877787666543
No 207
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.27 E-value=0.24 Score=51.50 Aligned_cols=277 Identities=11% Similarity=0.038 Sum_probs=150.8
Q ss_pred eeeecCCcEEEe--------ceEEEEecCCceEEEEEcCC-C-----CCceEEEEcCCCCeEEEEEc-C-CCCCcEEEEe
Q psy14258 139 RFPMVTHKIVYP--------EAIYFCTHYMEHCMIAIDLN-L-----SKPRGIALDPTSGYMFFTKW-G-ATRPMLERSL 202 (440)
Q Consensus 139 avD~~~~~lY~~--------~~I~~~~~dg~~~~~~~~~~-~-----~~P~~iavd~~~g~lywtd~-~-~~~~~I~r~~ 202 (440)
+..+.++.+|++ ..|.+.+.+|...++++... + ....++++.|...+|-++.. . .....|...+
T Consensus 74 ~p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~d 153 (695)
T 2bkl_A 74 TPSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVID 153 (695)
T ss_dssp CCEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEE
T ss_pred CCEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEE
Confidence 444678888888 24788888777666666421 1 13668899997777766643 2 2135899999
Q ss_pred CCCCCceeEEecCccC--ceEEEEeCCCCEEEEEeCCC------------CcEEEEEccCCC--cEEEecCCc-cCceee
Q psy14258 203 LDGTERFPMVTHKIVY--PYGVTVDFPTKHVYWVDTYL------------DFIDRINYDGTD--RKTIRKGFP-VQNLYD 265 (440)
Q Consensus 203 ~dG~~~~~l~~~~~~~--P~gl~vD~~~~~ly~~d~~~------------~~i~~~~~dG~~--~~~i~~~~~-~~~p~g 265 (440)
+++..... ...+.. ..+++..+.+..||++.... ..|+..++.+.. ...+..... -..-.+
T Consensus 154 l~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~ 231 (695)
T 2bkl_A 154 VDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQ 231 (695)
T ss_dssp TTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEE
T ss_pred CCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEE
Confidence 98765430 111111 15788888888898886532 248888886554 234444211 112345
Q ss_pred eeEec--CEEEEEecC---CCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecC--CccEEEEEE
Q psy14258 266 ITVFE--NNLFVTSWR---NQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKG--KPAIIKGLT 338 (440)
Q Consensus 266 l~~~~--~~ly~td~~---~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~--~~~~I~~i~ 338 (440)
+++.. ..|+++... +..|+.++..+++...+........... .+ .+.+++.++. ...+|..++
T Consensus 232 ~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~-~~---------~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 232 SDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH-AW---------KDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp EEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE-EE---------TTEEEEEECTTCTTCEEEEEB
T ss_pred EEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE-ec---------CCcEEEEECCCCCCCEEEEEe
Confidence 55544 466665432 3467776654444443433322222211 11 1233344432 247898888
Q ss_pred cCCCCCCc--eeeeeecCCCCceEEEEEcCCCEEEEEECC--CCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEE
Q psy14258 339 FKRDGTTE--QAIMPITDLKRPSVIDYHEKEEYIYYAELT--SYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLY 414 (440)
Q Consensus 339 ~~~~~~~~--~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~--~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lY 414 (440)
+++. ... ...++-..-....++++. +++++++-.. ...|+.++++|.....+...+...+.++++++.++.|+
T Consensus 302 ~~~~-~~~~~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 302 PAKP-ARASWKEIVPEDSSASLLSVSIV--GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp TTBC-SGGGCEEEECCCSSCEEEEEEEE--TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEE
T ss_pred CCCC-CccCCeEEecCCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEE
Confidence 8665 211 111111101123456665 6778877543 45677778777533333222234456666666666666
Q ss_pred EEeCC---CCeEEEEEeCC
Q psy14258 415 WTDAG---IGTINVAKISD 430 (440)
Q Consensus 415 wtd~~---~~~I~~~~~~g 430 (440)
++-.. -.+|...++.+
T Consensus 379 ~~~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 379 YVFTSFTTPRQIYKTSVST 397 (695)
T ss_dssp EEEEETTEEEEEEEEETTT
T ss_pred EEEcCCCCCCEEEEEECCC
Confidence 55322 24677777765
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.27 E-value=0.24 Score=51.49 Aligned_cols=282 Identities=9% Similarity=-0.011 Sum_probs=151.8
Q ss_pred ecccEEEEEEcCC----CCceeEEeCCCCCcceeeccccccceee-ccccccce-eeeecCCcEEEe--------ceEEE
Q psy14258 90 YMEHCMIAIDLNL----SKPRGIALDPTSGYMFFTKWGATRPMLE-RSLLDGTE-RFPMVTHKIVYP--------EAIYF 155 (440)
Q Consensus 90 ~~~~~ly~~d~~~----~~I~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~p~~-avD~~~~~lY~~--------~~I~~ 155 (440)
+.++++|++-... ..|++....+...+.+... .. +. ..-....+ ++.+.++.|.++ ..|.+
T Consensus 77 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~---~~--~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v 151 (695)
T 2bkl_A 77 RRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDP---NG--WSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHV 151 (695)
T ss_dssp EETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECG---GG--SSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEch---HH--hccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEE
Confidence 4577888776543 3466666544432222000 00 00 00013445 777888877776 36889
Q ss_pred EecCCceEEEEEcCCCCC--ceEEEEcCCCCeEEEEEcCCC----------CCcEEEEeCCCCCce-eEEecC---ccCc
Q psy14258 156 CTHYMEHCMIAIDLNLSK--PRGIALDPTSGYMFFTKWGAT----------RPMLERSLLDGTERF-PMVTHK---IVYP 219 (440)
Q Consensus 156 ~~~dg~~~~~~~~~~~~~--P~~iavd~~~g~lywtd~~~~----------~~~I~r~~~dG~~~~-~l~~~~---~~~P 219 (440)
.++++..... ...+.. ..+++..|....||++..... ..+|++.++++...+ .++... -..-
T Consensus 152 ~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~ 229 (695)
T 2bkl_A 152 IDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTF 229 (695)
T ss_dssp EETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCE
T ss_pred EECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEE
Confidence 9998765320 111212 267888887777888875321 145999999866532 333322 1244
Q ss_pred eEEEEeCCCCEEEEEeCC---CCcEEEEEccCCCcEEEecCC-ccCceeeeeEecCEEEEEec---CCCeEEEEeccCCC
Q psy14258 220 YGVTVDFPTKHVYWVDTY---LDFIDRINYDGTDRKTIRKGF-PVQNLYDITVFENNLFVTSW---RNQSIIRVNKFNSD 292 (440)
Q Consensus 220 ~gl~vD~~~~~ly~~d~~---~~~i~~~~~dG~~~~~i~~~~-~~~~p~gl~~~~~~ly~td~---~~~~i~~~~~~~g~ 292 (440)
.++++.+.+.+|+++... ...|+.++..+...+.+.... ....| +.-.++ +|+... .+..|+.++..+++
T Consensus 230 ~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~--~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 230 LQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV--HAWKDR-FYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE--EEETTE-EEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE--EecCCc-EEEEECCCCCCCEEEEEeCCCCC
Confidence 688899888888876533 237777766555555555421 11122 223445 666543 35789999876665
Q ss_pred c---eEEEecC-C-CCeEEEEeccCCCCCCCCCceeEEeecC--CccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc
Q psy14258 293 D---YETIANF-S-RPFAIHIYHRQKQPDALKPSTFLLYAKG--KPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE 365 (440)
Q Consensus 293 ~---~~~~~~~-~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~--~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~ 365 (440)
. ..++... . ...++.+. ++.|+++.. ...+|+.+++++. . ...+++.......++++++
T Consensus 307 ~~~~~~l~~~~~~~~l~~~~~~-----------~~~lv~~~~~dg~~~l~~~~~~g~-~--~~~l~~~~~~~v~~~~~s~ 372 (695)
T 2bkl_A 307 RASWKEIVPEDSSASLLSVSIV-----------GGHLSLEYLKDATSEVRVATLKGK-P--VRTVQLPGVGAASNLMGLE 372 (695)
T ss_dssp GGGCEEEECCCSSCEEEEEEEE-----------TTEEEEEEEETTEEEEEEEETTCC-E--EEECCCSSSSEECCCBSCT
T ss_pred ccCCeEEecCCCCCeEEEEEEE-----------CCEEEEEEEECCEEEEEEEeCCCC-e--eEEecCCCCeEEEEeecCC
Confidence 3 3344322 1 12233333 234444432 2356677776544 1 1112222222334566677
Q ss_pred CCCEEEEEEC---CCCeEEEEecCCCCeEEEEE
Q psy14258 366 KEEYIYYAEL---TSYVIERRKMFGRGKEVVID 395 (440)
Q Consensus 366 ~~~~vy~~d~---~~~~I~r~~~~g~~~~~~~~ 395 (440)
.++.++++-. .-.+|+..++.+...+++-.
T Consensus 373 d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~~ 405 (695)
T 2bkl_A 373 DLDDAYYVFTSFTTPRQIYKTSVSTGKSELWAK 405 (695)
T ss_dssp TCSEEEEEEEETTEEEEEEEEETTTCCEEEEEE
T ss_pred CCCEEEEEEcCCCCCCEEEEEECCCCcEEEEec
Confidence 7777776532 23679999988655555543
No 209
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.26 E-value=0.27 Score=51.88 Aligned_cols=335 Identities=9% Similarity=-0.082 Sum_probs=170.6
Q ss_pred eEEEecCCCcee-eee----ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeecccccc
Q psy14258 62 FGPMDIEEWDEG-LSF----LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 136 (440)
Q Consensus 62 I~~~~l~~~~~~-~~~----~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p 136 (440)
|.+.+....... ... .+....+.++..|.. +.||+.... +.|++.+........+......+. .+ .-..+
T Consensus 139 l~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~-~l--~~~~i 213 (781)
T 3v9f_A 139 IEYLDIATGKFTHYNKSTVPALPSEQTWTATEAED-GKLYIGHVE-GGLSILSLNDKSVKHFVHDPQNPN-SL--PGNDV 213 (781)
T ss_dssp EEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEET-TEEEEEETT-TEEEEEETTTTEEEEECC-----------CCSSE
T ss_pred eeEEECCCCeEEeeccCcccCCCccceEEEEECCC-CCEEEEecC-CCeEEEcCCCCceEeeecCCCCcc-cC--CCCce
Confidence 777776544433 111 011223777877754 777776544 346665544322211100000000 00 11234
Q ss_pred ce-eeeecCCcEEEe--ceEEEEecCCceEEEEEcC-------CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy14258 137 TE-RFPMVTHKIVYP--EAIYFCTHYMEHCMIAIDL-------NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT 206 (440)
Q Consensus 137 ~~-avD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~-------~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~ 206 (440)
.. ..|. .++|++. +.+.+.+......+.+... .......|..|+ .|.|++.... ..|.+.+.+..
T Consensus 214 ~~i~~d~-~g~lwigt~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~ 288 (781)
T 3v9f_A 214 RCIYKDT-NGNIWIGTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLK-DNKLWIATEL---NGIMILDLQQN 288 (781)
T ss_dssp EEEEECT-TCCEEEEETTEEEEEETTTTEEEC-----------CCCCEEEEEECT-TSEEEEEESS---SCEEEEETTCC
T ss_pred eEEEEcC-CCCEEEEeCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECC-CCCEEEEeCC---CCeEEECCCCC
Confidence 55 6664 3446666 5677777765443322211 124578999998 6888887754 36888887765
Q ss_pred CceeEEe-------c-----Cc--cCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec------CCc--cCcee
Q psy14258 207 ERFPMVT-------H-----KI--VYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK------GFP--VQNLY 264 (440)
Q Consensus 207 ~~~~l~~-------~-----~~--~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~------~~~--~~~p~ 264 (440)
....+.. . .+ .....|..| ..+.|++.- ..+-|..++......+.+.. ... .....
T Consensus 289 ~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D-~~g~lWigt-~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~ 366 (781)
T 3v9f_A 289 QFLLPEQIRFEFIREGDNNYSLSNASARYIFQD-SFNNIWIGT-WGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS 366 (781)
T ss_dssp ---------CEEECBCSSTTSBSSSCEEEEEEC-SSCCEEEEE-BSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE
T ss_pred eeeeeeccccccccCCCCCCCCCCCeEEEEEEe-CCCCEEEEe-cCCeEEEeCCCCCcceeeccCccccccCCCCCcceE
Confidence 4332221 0 11 235678888 566666654 34567777766554444321 111 22356
Q ss_pred eeeEec-CEEEEEecCCCeEEEEeccCCCceEEEe--cCC--CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEc
Q psy14258 265 DITVFE-NNLFVTSWRNQSIIRVNKFNSDDYETIA--NFS--RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTF 339 (440)
Q Consensus 265 gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~~~--~~~--~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~ 339 (440)
++..+. +.||+... .+.|.++++.+++...... .+. ....+... +++.|+++... +.+.+++.
T Consensus 367 ~i~~d~~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d----------~~g~lWigt~~-~Gl~~~~~ 434 (781)
T 3v9f_A 367 SVCDDGQGKLWIGTD-GGGINVFENGKRVAIYNKENRELLSNSVLCSLKD----------SEGNLWFGTYL-GNISYYNT 434 (781)
T ss_dssp EEEECTTSCEEEEEB-SSCEEEEETTEEEEECC-----CCCSBEEEEEEC----------TTSCEEEEETT-EEEEEECS
T ss_pred EEEEcCCCCEEEEeC-CCcEEEEECCCCeEEEccCCCCCCCcceEEEEEC----------CCCCEEEEecc-CCEEEEcC
Confidence 676665 47777643 4568888765432211110 110 11122211 24556665432 56666665
Q ss_pred CCCCCCceeeeeec----CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECC-----CCCeeeEEEecCC
Q psy14258 340 KRDGTTEQAIMPIT----DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTG-----IYNVEGMAVDWMA 410 (440)
Q Consensus 340 ~~~~~~~~~~~~~~----~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~-----~~~~~glAvD~~~ 410 (440)
... . ..... ......++..|. ++.||++.. +-|++.+..+...+.+.... ...+..|+.|. .
T Consensus 435 ~~~----~-~~~~~~~~~~~~~v~~i~~d~-~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~-~ 505 (781)
T 3v9f_A 435 RLK----K-FQIIELEKNELLDVRVFYEDK-NKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS-E 505 (781)
T ss_dssp SSC----E-EEECCSTTTCCCCEEEEEECT-TSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT-T
T ss_pred CCC----c-EEEeccCCCCCCeEEEEEECC-CCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcC-C
Confidence 433 1 11111 123456787876 466877754 67999998764444433222 24678899995 5
Q ss_pred CcEEEEeCCCCeEEEEEeCC
Q psy14258 411 NNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 411 ~~lYwtd~~~~~I~~~~~~g 430 (440)
++||+...+.+ |.+++.++
T Consensus 506 g~lWigt~~~G-l~~~~~~~ 524 (781)
T 3v9f_A 506 GRFWIGTFGGG-VGIYTPDM 524 (781)
T ss_dssp CCEEEEESSSC-EEEECTTC
T ss_pred CCEEEEEcCCC-EEEEeCCC
Confidence 67887765443 66666654
No 210
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.25 E-value=0.25 Score=51.41 Aligned_cols=276 Identities=9% Similarity=0.102 Sum_probs=153.6
Q ss_pred ecCCcEEEe--------ceEEEEecCCceEEEEEcCC-C-----CCceEEEEcCCCCeEEEEEc-CCC-CCcEEEEeCCC
Q psy14258 142 MVTHKIVYP--------EAIYFCTHYMEHCMIAIDLN-L-----SKPRGIALDPTSGYMFFTKW-GAT-RPMLERSLLDG 205 (440)
Q Consensus 142 ~~~~~lY~~--------~~I~~~~~dg~~~~~~~~~~-~-----~~P~~iavd~~~g~lywtd~-~~~-~~~I~r~~~dG 205 (440)
+.++.+|++ ..+.+.+.++...++++... + ....++++.|...+|.++.. +.. ...|...++++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~t 160 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDG 160 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTT
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCC
Confidence 668888887 26788887766666665421 1 13568899997777766643 221 12799999987
Q ss_pred CCceeEEecCccCceEEEEeCCCCEEEEEeCCC---------------CcEEEEEccCCCc--EEEecCCc-cCceeeee
Q psy14258 206 TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL---------------DFIDRINYDGTDR--KTIRKGFP-VQNLYDIT 267 (440)
Q Consensus 206 ~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~---------------~~i~~~~~dG~~~--~~i~~~~~-~~~p~gl~ 267 (440)
.....+..... ...+++..+.++.||++.... ..|+..++.+... ..+..... -....+++
T Consensus 161 g~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~ 239 (710)
T 2xdw_A 161 AKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAE 239 (710)
T ss_dssp TEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEE
Confidence 66544322221 245788988888999876432 2488888765432 34444211 12245666
Q ss_pred Eec--CEEEEEec-C---CCeEEEEeccC------CC-ceEEEe-cCCCCeEEEEeccCCCCCCCCCceeEEeecCC--c
Q psy14258 268 VFE--NNLFVTSW-R---NQSIIRVNKFN------SD-DYETIA-NFSRPFAIHIYHRQKQPDALKPSTFLLYAKGK--P 331 (440)
Q Consensus 268 ~~~--~~ly~td~-~---~~~i~~~~~~~------g~-~~~~~~-~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~--~ 331 (440)
+.. .+|+++.. . ...|+.++..+ +. ....+. ....... .+.+ ..+.+++.++.. .
T Consensus 240 ~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~--------dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 240 LSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTN--------EGTVFTFKTNRHSPN 310 (710)
T ss_dssp ECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEE--------ETTEEEEEECTTCTT
T ss_pred EcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEec--------cCCEEEEEECCCCCC
Confidence 654 47776654 2 46788888765 42 233332 2211111 1211 012333444321 3
Q ss_pred cEEEEEEcCCCCCCceeeeeecCCC--CceEEEEEcCCCEEEEEECCC--CeEEEEec-CCCCeEEEEECCCCCeeeEEE
Q psy14258 332 AIIKGLTFKRDGTTEQAIMPITDLK--RPSVIDYHEKEEYIYYAELTS--YVIERRKM-FGRGKEVVIDTGIYNVEGMAV 406 (440)
Q Consensus 332 ~~I~~i~~~~~~~~~~~~~~~~~~~--~p~~l~~d~~~~~vy~~d~~~--~~I~r~~~-~g~~~~~~~~~~~~~~~glAv 406 (440)
.+|..+++++. ........+.... ...++++.+ +++++++-... ..|++.++ +|.....+ ......+.++++
T Consensus 311 ~~l~~~d~~~~-~~~~~~~l~~~~~~~~~~~~~~~~-~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l-~~~~~~v~~~~~ 387 (710)
T 2xdw_A 311 YRLINIDFTDP-EESKWKVLVPEHEKDVLEWVACVR-SNFLVLCYLHDVKNTLQLHDLATGALLKIF-PLEVGSVVGYSG 387 (710)
T ss_dssp CEEEEEETTSC-CGGGCEEEECCCSSCEEEEEEEET-TTEEEEEEEETTEEEEEEEETTTCCEEEEE-CCCSSEEEEEEC
T ss_pred CEEEEEeCCCC-CcccceeccCCCCCCeEEEEEEEc-CCEEEEEEEECCEEEEEEEECCCCCEEEec-CCCCceEEEEec
Confidence 57888888765 2111111112211 234566653 56777775433 46888888 55433333 333456677888
Q ss_pred ecCCCcEEEEeC---CCCeEEEEEeCC
Q psy14258 407 DWMANNLYWTDA---GIGTINVAKISD 430 (440)
Q Consensus 407 D~~~~~lYwtd~---~~~~I~~~~~~g 430 (440)
+..+..|+++-. .-.+|..+++..
T Consensus 388 s~d~~~l~~~~ss~~~P~~i~~~d~~t 414 (710)
T 2xdw_A 388 QKKDTEIFYQFTSFLSPGIIYHCDLTK 414 (710)
T ss_dssp CTTCSEEEEEEECSSCCCEEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCCEEEEEECCC
Confidence 776777776632 236788888765
No 211
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.25 E-value=0.15 Score=48.76 Aligned_cols=253 Identities=8% Similarity=-0.118 Sum_probs=143.4
Q ss_pred eEEEecCCCceeeeeec-ccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-e
Q psy14258 62 FGPMDIEEWDEGLSFLT-FAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-R 139 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~-~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-a 139 (440)
|...+++.......... ....+.++++.+.++.|+....+ +.|...++.... .+ ..+. .....- +
T Consensus 115 v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-g~i~iwd~~~~~--~~--------~~~~--~~~~~v~~ 181 (401)
T 4aez_A 115 VYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-GLVDIYDVESQT--KL--------RTMA--GHQARVGC 181 (401)
T ss_dssp EEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTCC--EE--------EEEC--CCSSCEEE
T ss_pred EEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-CeEEEEECcCCe--EE--------EEec--CCCCceEE
Confidence 77778775554422221 23348999999987776666544 666665554221 11 0111 111222 6
Q ss_pred eeecCCcEEEe---ceEEEEecC-CceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC
Q psy14258 140 FPMVTHKIVYP---EAIYFCTHY-MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK 215 (440)
Q Consensus 140 vD~~~~~lY~~---~~I~~~~~d-g~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~ 215 (440)
+.|.++.|+.. +.|.+.++. +......+........++++.|....|+..... +.|...++........+...
T Consensus 182 ~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~v~iwd~~~~~~~~~~~~~ 258 (401)
T 4aez_A 182 LSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGND---NVVQIWDARSSIPKFTKTNH 258 (401)
T ss_dssp EEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT---SCEEEEETTCSSEEEEECCC
T ss_pred EEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCC---CeEEEccCCCCCccEEecCC
Confidence 77755544443 788888887 333333334455678999999954445444433 58888888764443333333
Q ss_pred ccCceEEEEeCCCCEEEEEeC--CCCcEEEEEccCCCcEEEecCCccCceeeeeEecC--EEEEEe-cCCCeEEEEeccC
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDT--YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN--NLFVTS-WRNQSIIRVNKFN 290 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~--~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~--~ly~td-~~~~~i~~~~~~~ 290 (440)
......+++.+.+..++.+-. ..+.|...++........... -.....+++..+ .++.+. ...+.|...+..+
T Consensus 259 ~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 259 NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA--GSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 456788999987888888754 577898888865444333332 234667777543 555543 2467777777655
Q ss_pred CCceEEE--ec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC
Q psy14258 291 SDDYETI--AN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 291 g~~~~~~--~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~ 342 (440)
++..... .. ......+.+. |++.++++-+..+.|+..++...
T Consensus 337 ~~~~~~~~~~~h~~~v~~~~~s----------~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 337 SGLTKQVDIPAHDTRVLYSALS----------PDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp TEEEEEEEEECCSSCCCEEEEC----------TTSSEEEEECTTSEEEEEECCC-
T ss_pred ccceeEEEecCCCCCEEEEEEC----------CCCCEEEEEeCCCcEEEEECCCC
Confidence 5433322 12 1233444333 33333333344477777777554
No 212
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.24 E-value=0.12 Score=47.64 Aligned_cols=258 Identities=9% Similarity=0.037 Sum_probs=143.0
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCce----EEEEEcCCCCCceEEEEcCCCC-eEEEEEcCCCCCcEEEEeC-C
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEH----CMIAIDLNLSKPRGIALDPTSG-YMFFTKWGATRPMLERSLL-D 204 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~----~~~~~~~~~~~P~~iavd~~~g-~lywtd~~~~~~~I~r~~~-d 204 (440)
.+.+ ++.+.+..|+.+ +.|.+.+++... ...+. ........+++.|... +|+..... +.|...++ +
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~~wd~~~ 88 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQ---GEILKVDLIG 88 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETT---SCEEEECSSS
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeee-ecCCceEEEEECCCCCcEEEEEcCC---CeEEEEEecc
Confidence 3555 666666655555 678887776544 33333 2446788999999655 56665544 58999998 7
Q ss_pred CCCceeEEec--CccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC---------CC-cEEEecCCccCceeeeeEecCE
Q psy14258 205 GTERFPMVTH--KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG---------TD-RKTIRKGFPVQNLYDITVFENN 272 (440)
Q Consensus 205 G~~~~~l~~~--~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG---------~~-~~~i~~~~~~~~p~gl~~~~~~ 272 (440)
+.....+ .. .-.....+++.+ ++.|+.+ ...+.|...++.. .. ...+ . .-..+..+++..+.
T Consensus 89 ~~~~~~~-~~~~~~~~v~~l~~~~-~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~-~--~~~~v~~~~~~~~~ 162 (342)
T 1yfq_A 89 SPSFQAL-TNNEANLGICRICKYG-DDKLIAA-SWDGLIEVIDPRNYGDGVIAVKNLNSNNT-K--VKNKIFTMDTNSSR 162 (342)
T ss_dssp SSSEEEC-BSCCCCSCEEEEEEET-TTEEEEE-ETTSEEEEECHHHHTTBCEEEEESCSSSS-S--SCCCEEEEEECSSE
T ss_pred CCceEec-cccCCCCceEEEEeCC-CCEEEEE-cCCCeEEEEcccccccccccccCCeeeEE-e--eCCceEEEEecCCc
Confidence 6544333 22 334567899987 5555555 4567788877643 11 1111 1 12356788888887
Q ss_pred EEEEecCCCeEEEEeccC-CCce-E-EEecCC-CCeEEEEeccCCCCCCCCC-ceeEEeecCCccEEEEEEcCCCCC---
Q psy14258 273 LFVTSWRNQSIIRVNKFN-SDDY-E-TIANFS-RPFAIHIYHRQKQPDALKP-STFLLYAKGKPAIIKGLTFKRDGT--- 344 (440)
Q Consensus 273 ly~td~~~~~i~~~~~~~-g~~~-~-~~~~~~-~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~--- 344 (440)
++.. ...+.|...+..+ +... . ...... .+..+.+. | ++.++++-+..+.|...+++..+.
T Consensus 163 l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~----------~~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 231 (342)
T 1yfq_A 163 LIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALL----------PKEQEGYACSSIDGRVAVEFFDDQGDDYN 231 (342)
T ss_dssp EEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEEC----------SGGGCEEEEEETTSEEEEEECCTTCCSTT
T ss_pred EEEE-eCCCeEEEEECCccccccceeeecCCCCceeEEEEC----------CCCCCEEEEEecCCcEEEEEEcCCCcccc
Confidence 5554 4567788778765 4432 2 222222 23344333 3 322333333347787777655410
Q ss_pred -CceeeeeecC--------CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECC-CCCeeeEEEecCCCcEE
Q psy14258 345 -TEQAIMPITD--------LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTG-IYNVEGMAVDWMANNLY 414 (440)
Q Consensus 345 -~~~~~~~~~~--------~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~-~~~~~glAvD~~~~~lY 414 (440)
.....+.... .....+++|++.++.|+.+. ..+.|+..++........+... -..+..|+ ..++.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~ 308 (342)
T 1yfq_A 232 SSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG-SDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILC 308 (342)
T ss_dssp CTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEE
T ss_pred cccceeeecccccccccccceeEEEEEEcCCCCEEEEec-CCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEE
Confidence 1111111111 11566899999877665444 6788998888754332222222 34566777 4455444
Q ss_pred EE
Q psy14258 415 WT 416 (440)
Q Consensus 415 wt 416 (440)
.+
T Consensus 309 s~ 310 (342)
T 1yfq_A 309 LA 310 (342)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 213
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=97.22 E-value=0.12 Score=46.95 Aligned_cols=265 Identities=9% Similarity=0.024 Sum_probs=150.0
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc--
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER-- 208 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~-- 208 (440)
.... ++ +.++.|+.+ +.|.+.+++.......+.........+++.|....|+..... +.|...++.....
T Consensus 20 ~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---g~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 20 DVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD---TMINGVPLFATSGED 95 (313)
T ss_dssp CEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT---SCEEEEETTCCTTSC
T ss_pred CcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC---CeEEEEEeeecCCCC
Confidence 3444 55 445444444 678888887766555555456778999999966666665544 4677666654321
Q ss_pred -eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec--CEEEEEecCCCeEEE
Q psy14258 209 -FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIR 285 (440)
Q Consensus 209 -~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~ 285 (440)
...+.........++++ ++.|+.+. ..+.|...+ .+.....+... ......+++.. +..+++-...+.|..
T Consensus 96 ~~~~~~~~~~~i~~~~~~--~~~l~~~~-~d~~i~~~d-~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d~~i~i 169 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSFQ--DGVVISGS-WDKTAKVWK-EGSLVYNLQAH--NASVWDAKVVSFSENKFLTASADKTIKL 169 (313)
T ss_dssp C-CEECCCSSCEEEEEEE--TTEEEEEE-TTSEEEEEE-TTEEEEEEECC--SSCEEEEEEEETTTTEEEEEETTSCEEE
T ss_pred cccchhhcccCEEEEEec--CCEEEEEe-CCCCEEEEc-CCcEEEecccC--CCceeEEEEccCCCCEEEEEECCCCEEE
Confidence 11122223345667774 55555554 456677766 33222222222 23455666543 344444445677766
Q ss_pred EeccCCCceEEEec-CC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec-CCCCceEEE
Q psy14258 286 VNKFNSDDYETIAN-FS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSVID 362 (440)
Q Consensus 286 ~~~~~g~~~~~~~~-~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~l~ 362 (440)
.+ .++....+.. .. ....+.+. |++.++.+ +..+.|+..++... .....+. ......+++
T Consensus 170 ~d--~~~~~~~~~~~~~~~i~~~~~~----------~~~~~~~~-~~dg~i~i~d~~~~----~~~~~~~~~~~~i~~~~ 232 (313)
T 3odt_A 170 WQ--NDKVIKTFSGIHNDVVRHLAVV----------DDGHFISC-SNDGLIKLVDMHTG----DVLRTYEGHESFVYCIK 232 (313)
T ss_dssp EE--TTEEEEEECSSCSSCEEEEEEE----------ETTEEEEE-ETTSEEEEEETTTC----CEEEEEECCSSCEEEEE
T ss_pred Ee--cCceEEEEeccCcccEEEEEEc----------CCCeEEEc-cCCCeEEEEECCch----hhhhhhhcCCceEEEEE
Confidence 66 2222223322 22 23334333 23333333 33478888887654 2222222 233567899
Q ss_pred EEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 363 YHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 363 ~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+.+.+ ++ ++-...+.|+..++........+...-..+..+++.+.+. | .+-...+.|.+.+++.
T Consensus 233 ~~~~~-~l-~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~-~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 233 LLPNG-DI-VSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-I-IVGSSDNLVRIFSQEK 296 (313)
T ss_dssp ECTTS-CE-EEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-E-EEEETTSCEEEEESCG
T ss_pred EecCC-CE-EEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-E-EEEeCCCcEEEEeCCC
Confidence 99876 44 4555688999999876554444454556788999987665 4 4545578899999876
No 214
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.21 E-value=0.18 Score=48.92 Aligned_cols=262 Identities=9% Similarity=0.041 Sum_probs=147.1
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK 215 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~ 215 (440)
++.+.++.|+.+ +.|.+.+++.......+........+++.++ ..|+..... +.|...++........+...
T Consensus 164 ~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~~l~s~s~d---g~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 164 SSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE--KRVVSGSRD---ATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET--TEEEEEETT---SEEEEEESSSCCEEEEEECC
T ss_pred EEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecC--CEEEEEeCC---CEEEEEECCCCcEEEEEcCC
Confidence 444445534433 6899999876655444444445677888865 455555544 57888888654433333333
Q ss_pred ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
......+++| +..|+.+. ..+.|...++..........+ .......+++.+..++... .++.|...+..+++...
T Consensus 239 ~~~v~~~~~~--~~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 239 VAAVRCVQYD--GRRVVSGA-YDFMVKVWDPETETCLHTLQG-HTNRVYSLQFDGIHVVSGS-LDTSIRVWDVETGNCIH 313 (445)
T ss_dssp SSCEEEEEEC--SSCEEEEE-TTSCEEEEEGGGTEEEEEECC-CSSCEEEEEECSSEEEEEE-TTSCEEEEETTTCCEEE
T ss_pred cccEEEEEEC--CCEEEEEc-CCCEEEEEECCCCcEeEEecC-CCCceEEEEECCCEEEEEe-CCCeEEEEECCCCCEEE
Confidence 3455667763 55555554 567788888754433222222 1234567777555665554 47788888887776555
Q ss_pred EEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec----CCCCceEEEEEcCCCEE
Q psy14258 296 TIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT----DLKRPSVIDYHEKEEYI 370 (440)
Q Consensus 296 ~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~----~~~~p~~l~~d~~~~~v 370 (440)
.+.... ....+... +.+|+.+ +..+.|+..++... .....+. ......+++++ ++.
T Consensus 314 ~~~~~~~~v~~~~~~-----------~~~l~~~-~~dg~i~vwd~~~~----~~~~~~~~~~~~~~~v~~~~~~--~~~- 374 (445)
T 2ovr_B 314 TLTGHQSLTSGMELK-----------DNILVSG-NADSTVKIWDIKTG----QCLQTLQGPNKHQSAVTCLQFN--KNF- 374 (445)
T ss_dssp EECCCCSCEEEEEEE-----------TTEEEEE-ETTSCEEEEETTTC----CEEEEECSTTSCSSCEEEEEEC--SSE-
T ss_pred EEcCCcccEEEEEEe-----------CCEEEEE-eCCCeEEEEECCCC----cEEEEEccCCCCCCCEEEEEEC--CCE-
Confidence 443322 22233221 2234433 33478888887544 1222222 22235577776 344
Q ss_pred EEEECCCCeEEEEecCCCCe-EEEEE----CCCCCeeeEEEecCCCcEEEEeCCCC----eEEEEEeCC
Q psy14258 371 YYAELTSYVIERRKMFGRGK-EVVID----TGIYNVEGMAVDWMANNLYWTDAGIG----TINVAKISD 430 (440)
Q Consensus 371 y~~d~~~~~I~r~~~~g~~~-~~~~~----~~~~~~~glAvD~~~~~lYwtd~~~~----~I~~~~~~g 430 (440)
.++-...+.|...++..... ..+.. ..-..+..+++++.+. +..+-...+ .|.+.+++.
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCC
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCC
Confidence 44555688899888875432 33321 1224578889986544 334433344 499999886
No 215
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.20 E-value=0.15 Score=47.90 Aligned_cols=237 Identities=7% Similarity=-0.090 Sum_probs=137.8
Q ss_pred ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe----cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 174 PRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT----HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 174 P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~----~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
..+++..| .++|.-+... +.|...+++......... .--.....+++.+.+.+|.-+. ..+.|..-++...
T Consensus 85 v~~~~~s~-d~~l~~~s~d---g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-~d~~i~iwd~~~~ 159 (344)
T 4gqb_B 85 VADLTWVG-ERGILVASDS---GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-KDICIKVWDLAQQ 159 (344)
T ss_dssp EEEEEEET-TTEEEEEETT---SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTT
T ss_pred EEEEEEeC-CCeEEEEECC---CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-CCCeEEEEECCCC
Confidence 34666666 3555544333 466666665333222111 1123467888987776666554 4567888877644
Q ss_pred CcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEeccCCCceEEEecCC---CCeEEEEeccCCCCCCCCCceeE
Q psy14258 250 DRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVNKFNSDDYETIANFS---RPFAIHIYHRQKQPDALKPSTFL 324 (440)
Q Consensus 250 ~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~~~~g~~~~~~~~~~---~p~~~~v~~~~~qp~~~~~~~~l 324 (440)
.......+ .......+++..+ .++.+-...+.|...+..+++....+.... .+..+... +. +..+
T Consensus 160 ~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-p~--------~~~~ 229 (344)
T 4gqb_B 160 VVLSSYRA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWH-PQ--------QSEV 229 (344)
T ss_dssp EEEEEECC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEEC-SS--------CTTE
T ss_pred cEEEEEcC-cCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeec-CC--------CCcc
Confidence 33333332 1234566776543 677777777888888887777665443211 23334333 11 2334
Q ss_pred EeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeee
Q psy14258 325 LYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEG 403 (440)
Q Consensus 325 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~g 403 (440)
+++-+..+.|+..++... .....+.+ -....+++|.+.+..+..+-...++|+..++...... .....-+.+..
T Consensus 230 l~sg~~dg~v~~wd~~~~----~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~ 304 (344)
T 4gqb_B 230 FVFGDENGTVSLVDTKST----SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRD 304 (344)
T ss_dssp EEEEETTSEEEEEESCC------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEE
T ss_pred eEEeccCCcEEEEECCCC----cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEE
Confidence 444344478888887654 22222332 2345689999987666666667888988887654222 22233457899
Q ss_pred EEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 404 MAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 404 lAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
|++.+.++.|..+-...++|.+-++..
T Consensus 305 v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 305 ATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 999888888887766678888887765
No 216
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.17 E-value=0.14 Score=47.09 Aligned_cols=284 Identities=8% Similarity=-0.025 Sum_probs=150.4
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+|+|++..+.+..+-...+.|+.-++........ .+...+......+.. ++.+.+..|+.+ +.|...+
T Consensus 40 ~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~-----~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~ 114 (340)
T 4aow_A 40 WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYG-----IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWD 114 (340)
T ss_dssp CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSE-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc-----eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEe
Confidence 3999999988777777777777777666654321110 000112222334555 676666655544 6777777
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC-ccCceEEEEeCCCC-EEEEEe
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK-IVYPYGVTVDFPTK-HVYWVD 235 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~-~~~P~gl~vD~~~~-~ly~~d 235 (440)
...................+...+....|+..... +.+...++.+.......... ......+++.+... .++.+-
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d---~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 115 LTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD---KTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC 191 (340)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT---SCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE
T ss_pred ecccceeeeecCCCCceeEEEEeecCccceeecCC---CeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE
Confidence 77766655555455667777777755555544433 46666666655443332221 22345566654443 344444
Q ss_pred CCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCC
Q psy14258 236 TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQ 314 (440)
Q Consensus 236 ~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~q 314 (440)
...+.|...++..........+. -.....+++..+ .++++-..++.|...+..+++....+........+. ++
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~-~~---- 265 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGH-TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALC-FS---- 265 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEE-EC----
T ss_pred cCCCEEEEEECCCCceeeEecCC-CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeee-cC----
Confidence 45567777776554433333321 234567777654 455555567777777776655444443322222232 22
Q ss_pred CCCCCCceeEEeecCCccEEEEEEcCCCCCCc-----eeeeee-cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 315 PDALKPSTFLLYAKGKPAIIKGLTFKRDGTTE-----QAIMPI-TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 315 p~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~-----~~~~~~-~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
|+.+++.+.. .+.|+..++.+..... ...... .......+++|.+.++.|+-+ ...+.|+.-++.
T Consensus 266 -----~~~~~~~~~~-d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg-s~Dg~v~iW~~~ 336 (340)
T 4aow_A 266 -----PNRYWLCAAT-GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAG-YTDNLVRVWQVT 336 (340)
T ss_dssp -----SSSSEEEEEE-TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEE-ETTSCEEEEEEE
T ss_pred -----CCCceeeccC-CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEE-eCCCEEEEEeCC
Confidence 2333433322 3677777776541000 000000 111234689999987766544 356777666554
No 217
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.15 E-value=0.15 Score=53.46 Aligned_cols=117 Identities=7% Similarity=-0.088 Sum_probs=72.1
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCC-----CceEEEEcCCCCeEEEEEcCCC------CCcEE
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLS-----KPRGIALDPTSGYMFFTKWGAT------RPMLE 199 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~-----~P~~iavd~~~g~lywtd~~~~------~~~I~ 199 (440)
.|.. .+-|..+.-|++ +.|...++++..+++++..... ...++++.|...+|.++..... .+.++
T Consensus 16 ~~~~~~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCCCEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 4556 666765433433 7899999988777777664321 2244788997667777653210 13677
Q ss_pred EEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEE
Q psy14258 200 RSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTI 254 (440)
Q Consensus 200 r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i 254 (440)
..++.+...+.+.. ....-...++.|.+++|.++. .+.|+..+.+++....+
T Consensus 96 ~~d~~~~~~~~l~~-~~~~~~~~~~SPdG~~la~~~--~~~i~~~~~~~~~~~~l 147 (740)
T 4a5s_A 96 IYDLNKRQLITEER-IPNNTQWVTWSPVGHKLAYVW--NNDIYVKIEPNLPSYRI 147 (740)
T ss_dssp EEETTTTEECCSSC-CCTTEEEEEECSSTTCEEEEE--TTEEEEESSTTSCCEEC
T ss_pred EEECCCCcEEEccc-CCCcceeeEECCCCCEEEEEE--CCeEEEEECCCCceEEE
Confidence 88888765444322 122345677888888887774 35688777766555444
No 218
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.13 E-value=0.36 Score=50.87 Aligned_cols=315 Identities=8% Similarity=-0.090 Sum_probs=167.3
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceee-------ccccccceeeccccccce-eeeecCCcEEEe---
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFT-------KWGATRPMLERSLLDGTE-RFPMVTHKIVYP--- 150 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~-------~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~--- 150 (440)
.+.+|..|. ++.||+.... +.|.+++........+.. ...... .-.-..+.. ..|.. ++|++.
T Consensus 259 ~i~~i~~d~-~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~---~l~~~~v~~i~~D~~-g~lWigt~~ 332 (781)
T 3v9f_A 259 YIFSIKQLK-DNKLWIATEL-NGIMILDLQQNQFLLPEQIRFEFIREGDNNY---SLSNASARYIFQDSF-NNIWIGTWG 332 (781)
T ss_dssp CEEEEEECT-TSEEEEEESS-SCEEEEETTCC---------CEEECBCSSTT---SBSSSCEEEEEECSS-CCEEEEEBS
T ss_pred eEEEEEECC-CCCEEEEeCC-CCeEEECCCCCeeeeeeccccccccCCCCCC---CCCCCeEEEEEEeCC-CCEEEEecC
Confidence 378888875 4667776653 346665554332221100 000000 001123556 67754 446665
Q ss_pred ceEEEEecCCceEEEEEc-------CC--CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe---cCccC
Q psy14258 151 EAIYFCTHYMEHCMIAID-------LN--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT---HKIVY 218 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~-------~~--~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~---~~~~~ 218 (440)
+.|.+.+......+.... .. .....+|+.|+ .|.||+...+ ..|.+.+.+....+.+.. .....
T Consensus 333 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g~lWigt~~---~Gl~~~~~~~~~~~~~~~~~~~~~~~ 408 (781)
T 3v9f_A 333 GGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG-QGKLWIGTDG---GGINVFENGKRVAIYNKENRELLSNS 408 (781)
T ss_dssp SCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT-TSCEEEEEBS---SCEEEEETTEEEEECC-----CCCSB
T ss_pred CeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC-CCCEEEEeCC---CcEEEEECCCCeEEEccCCCCCCCcc
Confidence 567777776544333321 11 24578999998 6889887755 368888775432221111 01234
Q ss_pred ceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec-CCccCceeeeeEec-CEEEEEecCCCeEEEEeccCCCceEE
Q psy14258 219 PYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK-GFPVQNLYDITVFE-NNLFVTSWRNQSIIRVNKFNSDDYET 296 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~~~~~~p~gl~~~~-~~ly~td~~~~~i~~~~~~~g~~~~~ 296 (440)
...|..| ..++|++... .+.+.+++......+.+.. .........+..+. +.||+... +.|.++++.+++....
T Consensus 409 v~~i~~d-~~g~lWigt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~ 484 (781)
T 3v9f_A 409 VLCSLKD-SEGNLWFGTY-LGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHH 484 (781)
T ss_dssp EEEEEEC-TTSCEEEEET-TEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEE
T ss_pred eEEEEEC-CCCCEEEEec-cCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEec
Confidence 5678888 5677777643 3467777765443333221 11123456777664 47777754 6789998876655443
Q ss_pred EecC------CCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceee-ee-ecCC--CCceEEEEEcC
Q psy14258 297 IANF------SRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAI-MP-ITDL--KRPSVIDYHEK 366 (440)
Q Consensus 297 ~~~~------~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~-~~-~~~~--~~p~~l~~d~~ 366 (440)
.... ..+..+... +++.|.++... +.+.+++.++. ... .. ..++ ....+|..|..
T Consensus 485 ~~~~~~~~~~~~i~~i~~d----------~~g~lWigt~~-~Gl~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~ 549 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQD----------SEGRFWIGTFG-GGVGIYTPDMQ----LVRKFNQYEGFCSNTINQIYRSSK 549 (781)
T ss_dssp ECTTTSSCSCSCEEEEEEC----------TTCCEEEEESS-SCEEEECTTCC----EEEEECTTTTCSCSCEEEEEECTT
T ss_pred ccCcccccccceeEEEEEc----------CCCCEEEEEcC-CCEEEEeCCCC----eEEEccCCCCCCCCeeEEEEECCC
Confidence 3211 112233222 34566666542 34666665443 111 11 1122 23457877765
Q ss_pred CCEEEEEECCCCeEEEEecCCCCeEEEEE-CCC--CCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 367 EEYIYYAELTSYVIERRKMFGRGKEVVID-TGI--YNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 367 ~~~vy~~d~~~~~I~r~~~~g~~~~~~~~-~~~--~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+.|+++.. .+.|++.+......+.+.. .++ ..+.+|+.|. .++||++. .+.|.+++++.
T Consensus 550 -g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~-~g~lW~~t--~~Gl~~~~~~~ 611 (781)
T 3v9f_A 550 -GQMWLATG-EGLVCFPSARNFDYQVFQRKEGLPNTHIRAISEDK-NGNIWAST--NTGISCYITSK 611 (781)
T ss_dssp -SCEEEEET-TEEEEESCTTTCCCEEECGGGTCSCCCCCEEEECS-SSCEEEEC--SSCEEEEETTT
T ss_pred -CCEEEEEC-CCceEEECCCCCcEEEccccCCCCCceEEEEEECC-CCCEEEEc--CCceEEEECCC
Confidence 55777654 5555888887644433321 233 3467899995 66788875 34577777765
No 219
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.10 E-value=0.18 Score=46.85 Aligned_cols=268 Identities=7% Similarity=-0.055 Sum_probs=146.4
Q ss_pred cccce-eeeecC--CcEEEe----ceEEEEecCC--ceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC
Q psy14258 134 LDGTE-RFPMVT--HKIVYP----EAIYFCTHYM--EHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD 204 (440)
Q Consensus 134 ~~p~~-avD~~~--~~lY~~----~~I~~~~~dg--~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d 204 (440)
..... ++.+.. +++.++ +.|.+.+++. ......+.........+++.|...+|+..... +.|...+++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d---g~v~iwd~~ 116 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLS 116 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT---SEEEEEETT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC---CcEEEEEcC
Confidence 34555 666654 344544 6788888874 43323334445678999999955556655544 588888887
Q ss_pred CCCceeEEecCccCceEEEE--eCCCCEEEEEeCCCCcEEEEEccCCC-cEEEecCCccCceeeeeEecCEEEEEecCCC
Q psy14258 205 GTERFPMVTHKIVYPYGVTV--DFPTKHVYWVDTYLDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFENNLFVTSWRNQ 281 (440)
Q Consensus 205 G~~~~~l~~~~~~~P~gl~v--D~~~~~ly~~d~~~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~ 281 (440)
......+.. .-.....+++ ++. ++++++-...+.|...++.... ...+... .....+....+.++.... .+
T Consensus 117 ~~~~~~~~~-~~~~v~~~~~~~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~ 190 (368)
T 3mmy_A 117 SNQAIQIAQ-HDAPVKTIHWIKAPN-YSCVMTGSWDKTLKFWDTRSSNPMMVLQLP---ERCYCADVIYPMAVVATA-ER 190 (368)
T ss_dssp TTEEEEEEE-CSSCEEEEEEEECSS-CEEEEEEETTSEEEEECSSCSSCSEEEECS---SCEEEEEEETTEEEEEEG-GG
T ss_pred CCCceeecc-ccCceEEEEEEeCCC-CCEEEEccCCCcEEEEECCCCcEEEEEecC---CCceEEEecCCeeEEEeC-CC
Confidence 665444332 2345677887 544 4444444456788888875433 3333322 245566666666665553 45
Q ss_pred eEEEEeccCCCceEE-Eec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCC---
Q psy14258 282 SIIRVNKFNSDDYET-IAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLK--- 356 (440)
Q Consensus 282 ~i~~~~~~~g~~~~~-~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~--- 356 (440)
.+...+......... +.. ...........+..+. ....+++-+..+.|...+++.. ........+....
T Consensus 191 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dg~i~i~~~~~~-~~~~~~~~~~~~~~~~ 264 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN-----KPTGFALGSIEGRVAIHYINPP-NPAKDNFTFKCHRSNG 264 (368)
T ss_dssp CEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS-----CEEEEEEEETTSEEEEEESSCS-CHHHHSEEEECSEEC-
T ss_pred cEEEEEeccccchhhhccccccCCCceEEEcccCCC-----CCCeEEEecCCCcEEEEecCCC-Cccccceeeeeeeccc
Confidence 555555543322221 111 1122222211111110 1122333333478888887665 1100111111111
Q ss_pred ----------CceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEe
Q psy14258 357 ----------RPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTD 417 (440)
Q Consensus 357 ----------~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd 417 (440)
...++++++.++.|+.+ ...+.|+..++........+...-..+..|++.+.+..|..+.
T Consensus 265 ~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 265 TNTSAPQDIYAVNGIAFHPVHGTLATV-GSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp ---CCCEEECCEEEEEECTTTCCEEEE-ETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred ccccccccccceEEEEEecCCCEEEEE-ccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 36689999987766554 4678899999885433333333345688999998888777774
No 220
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.08 E-value=0.4 Score=50.59 Aligned_cols=332 Identities=9% Similarity=-0.064 Sum_probs=177.3
Q ss_pred eEEEecCCCcee-eee------ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeecccc
Q psy14258 62 FGPMDIEEWDEG-LSF------LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 134 (440)
Q Consensus 62 I~~~~l~~~~~~-~~~------~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 134 (440)
|.+++....... ... .+....+.++..|.. +.|++.... .|.+.+........+......+.. + ...
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~~~~-l--~~~ 310 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQ-NRLWIGTFN--DLNIYHEGTDSFASYSSNPVENGS-L--SQR 310 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTT-SCEEEEESS--CEEEEETTTTEEEEECCCTTSTTS-C--SSS
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCC-CCEEEEeCC--hhheEcCCCCeEEEEecCCCCCCC-C--CCC
Confidence 777776654333 111 112223888888854 667776643 455554432221111000000000 0 113
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEc----CC--CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAID----LN--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD 204 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~----~~--~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d 204 (440)
.... ..|.. ++|++. +.|.+.+......+.+.. .. -....+|+.|+ .|.|++...+ +.|.+.+..
T Consensus 311 ~i~~i~~D~~-g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~-~g~lWiGt~~---~Gl~~~~~~ 385 (795)
T 4a2l_A 311 SVRSIFMDSQ-GGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDK-DKNLWIGTND---GGLNLYNPI 385 (795)
T ss_dssp CEEEEEECTT-SCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECT-TSCEEEEESS---SCEEEECTT
T ss_pred cEEEEEEeCC-cCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECC-CCCEEEEECC---CCeEEEcCC
Confidence 4556 67754 446665 567777765543333321 11 23578999998 6888887655 378888776
Q ss_pred CCCceeEEec--------CccCceEEEEeCCCCE-EEEEeCCCCcEEEEEccCCCcEEEecC-C--ccCceeeeeEec-C
Q psy14258 205 GTERFPMVTH--------KIVYPYGVTVDFPTKH-VYWVDTYLDFIDRINYDGTDRKTIRKG-F--PVQNLYDITVFE-N 271 (440)
Q Consensus 205 G~~~~~l~~~--------~~~~P~gl~vD~~~~~-ly~~d~~~~~i~~~~~dG~~~~~i~~~-~--~~~~p~gl~~~~-~ 271 (440)
....+.+... .......|+.| ..++ |+++- ..+.|.+++......+.+... . .......+..+. +
T Consensus 386 ~~~~~~~~~~~~~~~~~l~~~~v~~i~~d-~~g~~lWigt-~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 386 TQRFTSYTLQEDESARGIGSNNIKAVYVD-EKKSLVYIGT-HAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp TCCEEEECCC------CCSCSCEEEEEEE-TTTTEEEEEE-TTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred CCcEEEEecCCCCcccCCCCccEEEEEEc-CCCCEEEEEe-CcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence 5433333211 12345678888 5566 66554 445688888776555444321 0 123456676664 4
Q ss_pred EEEEEecCCCeEEEEeccCCCceEEEec-----CC--CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCC
Q psy14258 272 NLFVTSWRNQSIIRVNKFNSDDYETIAN-----FS--RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGT 344 (440)
Q Consensus 272 ~ly~td~~~~~i~~~~~~~g~~~~~~~~-----~~--~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~ 344 (440)
.||++.. +.+.++++.+++....... +. ....+.. ++++.|+++.. +.+.+++.+..
T Consensus 464 ~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~----------d~~g~lWigt~--~Gl~~~~~~~~-- 527 (795)
T 4a2l_A 464 NLWLGTL--SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFR----------DSHKRLWIGGE--EGLSVFKQEGL-- 527 (795)
T ss_dssp CEEEEES--SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEE----------CTTCCEEEEES--SCEEEEEEETT--
T ss_pred CEEEEec--CceeEEeCCCCeEEEccccccccccCCceEEEEEE----------CCCCCEEEEeC--CceEEEeCCCC--
Confidence 7877764 5688888765533322111 10 1122221 13466777665 56777776544
Q ss_pred Cceeeee----ecCC--CCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE-CCC--CCeeeEEEecCCCcEEE
Q psy14258 345 TEQAIMP----ITDL--KRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID-TGI--YNVEGMAVDWMANNLYW 415 (440)
Q Consensus 345 ~~~~~~~----~~~~--~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~-~~~--~~~~glAvD~~~~~lYw 415 (440)
..... ..++ ....+|..|.. +.|+++.. +-|++.+......+.+.. .++ ..+.+|+.|. .++||+
T Consensus 528 --~~~~~~~~~~~~l~~~~i~~i~~d~~-g~lWigT~--~Gl~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~-~g~lWi 601 (795)
T 4a2l_A 528 --DIQKASILPVSNVTKLFTNCIYEASN-GIIWVGTR--EGFYCFNEKDKQIKRYNTTNGLPNNVVYGILEDS-FGRLWL 601 (795)
T ss_dssp --EEEECCCSCSCGGGGSCEEEEEECTT-SCEEEEES--SCEEEEETTTTEEEEECGGGTCSCSCEEEEEECT-TSCEEE
T ss_pred --eEEEecCCCCCCCCCCeeEEEEECCC-CCEEEEeC--CCceeECCCCCcEEEeCCCCCCchhheEEEEECC-CCCEEE
Confidence 11100 0111 24557888875 55777654 378999887643333221 233 3467899995 567888
Q ss_pred EeCCCCeEEEEEeCC
Q psy14258 416 TDAGIGTINVAKISD 430 (440)
Q Consensus 416 td~~~~~I~~~~~~g 430 (440)
+. .+.|.+++++.
T Consensus 602 ~t--~~Gl~~~~~~~ 614 (795)
T 4a2l_A 602 ST--NRGISCFNPET 614 (795)
T ss_dssp EE--TTEEEEEETTT
T ss_pred Ec--CCceEEEcCCC
Confidence 76 35677777765
No 221
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.06 E-value=0.00014 Score=48.98 Aligned_cols=31 Identities=26% Similarity=0.682 Sum_probs=27.5
Q ss_pred ccCCC-CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 15 DECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 15 ~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
|||.. ++.|+|.|.|++|+|.|. ++||.|..
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~ 34 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 34 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECT
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECC
Confidence 68874 678999999999999999 99999864
No 222
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.05 E-value=0.2 Score=46.67 Aligned_cols=270 Identities=11% Similarity=0.058 Sum_probs=150.3
Q ss_pred cccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce
Q psy14258 134 LDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF 209 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~ 209 (440)
....+ ++.+.++.|.-+ +.|.+-++........+.........+++.|...+|...... +.|...++......
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d---~~v~iw~~~~~~~~ 132 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD---NICSIYNLKTREGN 132 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT---CEEEEEETTTCSBS
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC---CeEEEEECccCCCc
Confidence 34455 555555434333 678888876544443334444567899999965555544443 57777777543211
Q ss_pred -eE---EecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEE
Q psy14258 210 -PM---VTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSII 284 (440)
Q Consensus 210 -~l---~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~ 284 (440)
.+ +.........+.+. ..++|+.+ ...+.|...++..........+ .......+++..+ .++.+-...+.|.
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~-~~~~l~s~-s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFL-DDNQIVTS-SGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEE-ETTEEEEE-ETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ceeEEEecCCCccEEEEEEC-CCCcEEEE-ECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 11 11122234455554 34455444 3556777777654333322322 1234567777654 5666666678888
Q ss_pred EEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec--C-CCCceE
Q psy14258 285 RVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT--D-LKRPSV 360 (440)
Q Consensus 285 ~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~--~-~~~p~~ 360 (440)
..+..+++....+..-. ....+.+. |++.++++-+..+.|+..++... ....... . ......
T Consensus 210 ~wd~~~~~~~~~~~~h~~~v~~v~~~----------p~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 210 LWDVREGMCRQTFTGHESDINAICFF----------PNGNAFATGSDDATCRLFDLRAD----QELMTYSHDNIICGITS 275 (340)
T ss_dssp EEETTTCSEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTSCEEEEETTTT----EEEEEECCTTCCSCEEE
T ss_pred EEECCCCeeEEEEcCCcCCEEEEEEc----------CCCCEEEEEcCCCcEEEEECCCC----cEEEEEccCCcccceEE
Confidence 88877766555554322 33444433 34334444444578888887654 1111111 1 123568
Q ss_pred EEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEE
Q psy14258 361 IDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINV 425 (440)
Q Consensus 361 l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~ 425 (440)
++|.+.+..+. +-...+.|...++........+...-..+..|++.+.+..|.-. ...++|.+
T Consensus 276 ~~~s~~g~~l~-~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~-s~D~~i~i 338 (340)
T 1got_B 276 VSFSKSGRLLL-AGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATG-SWDSFLKI 338 (340)
T ss_dssp EEECTTSSEEE-EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEE-ETTSCEEE
T ss_pred EEECCCCCEEE-EECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEE-cCCccEEe
Confidence 99999877554 44567889888876544444444445678889998766544433 33444543
No 223
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.96 E-value=0.23 Score=45.86 Aligned_cols=281 Identities=10% Similarity=0.023 Sum_probs=149.5
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.++++.+....+..+-...+.|+.-++...... . ..+...+...-..... ++.+.++.|+-+ +.|.+.+
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~-~----~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK-F----GVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE-E----EEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCcc-c----cccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 38888888766566677666677765555422111 0 0011112223334555 666666544444 6888888
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCC-----CEEE
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPT-----KHVY 232 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~-----~~ly 232 (440)
+....+...+........+++++|. +.++.+-... +.|...++.+.....+.. .......+.+.+.. +.++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D--~~i~vwd~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKK-ASMIISGSRD--KTIKVWTIKGQCLATLLG-HNDWVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTT-SCEEEEEETT--SCEEEEETTSCEEEEECC-CSSCEEEEEECCC------CCEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCC-CCEEEEEeCC--CeEEEEECCCCeEEEEec-cCCcEEEEEEccCCCCCCCccEE
Confidence 8765544334445567889999995 4444443333 578888887654433321 22344556665432 2244
Q ss_pred EEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEecc
Q psy14258 233 WVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHR 311 (440)
Q Consensus 233 ~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~ 311 (440)
.+-...+.|..-++..........+ .......+++..+ .+..+-...+.|...+..+++....+........+.+.
T Consensus 170 ~s~~~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s-- 246 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQFQIEADFIG-HNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFS-- 246 (319)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC-CCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEEC--
T ss_pred EEEeCCCEEEEEECCcchhheeecC-CCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEc--
Confidence 4444566777777654433322222 1234567777654 55555556778887787666555444433333444333
Q ss_pred CCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeec-----CCCCceEEEEEcCCCEEEEEECCCCeEEEEec
Q psy14258 312 QKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-----DLKRPSVIDYHEKEEYIYYAELTSYVIERRKM 385 (440)
Q Consensus 312 ~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-----~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~ 385 (440)
|+ .+|..+.. ..|...+++............. .-....+++|.+.++.|+-. ...+.|+.-++
T Consensus 247 --------p~~~~la~~~~--~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~Dg~i~vWd~ 315 (319)
T 3frx_A 247 --------PNRYWLAAATA--TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTDNVIRVWQV 315 (319)
T ss_dssp --------SSSSEEEEEET--TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETTSCEEEEEE
T ss_pred --------CCCCEEEEEcC--CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ecCceEEEEEE
Confidence 33 33444433 4566666554300000000000 11234589999988866544 45667665554
No 224
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.96 E-value=0.49 Score=49.52 Aligned_cols=275 Identities=7% Similarity=-0.017 Sum_probs=150.2
Q ss_pred eecCCcEEEe--------ceEEEEecC---CceEEEEEcCC-C-----CCceEEEEcCCCCeEEEEEcC--CCCCcEEEE
Q psy14258 141 PMVTHKIVYP--------EAIYFCTHY---MEHCMIAIDLN-L-----SKPRGIALDPTSGYMFFTKWG--ATRPMLERS 201 (440)
Q Consensus 141 D~~~~~lY~~--------~~I~~~~~d---g~~~~~~~~~~-~-----~~P~~iavd~~~g~lywtd~~--~~~~~I~r~ 201 (440)
-+.++.+|++ ..|.+.+.+ |...++++... + ....++++.|...+|.++... .....|...
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~ 194 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFV 194 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEE
Confidence 3678888887 357888876 65556664421 1 135678999976777665432 211369999
Q ss_pred eCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCC-------------CcEEEEEccCCC--cEEEecCCcc-Cceee
Q psy14258 202 LLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYL-------------DFIDRINYDGTD--RKTIRKGFPV-QNLYD 265 (440)
Q Consensus 202 ~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~-------------~~i~~~~~dG~~--~~~i~~~~~~-~~p~g 265 (440)
++++........... ...+++..+. +.||++.... ..|+..++.+.. ...+.....- ....+
T Consensus 195 dl~tg~~~~~~~~~~-~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 195 GVADGKPLADELKWV-KFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp ETTTCCEEEEEEEEE-ESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred ECCCCCCCCccCCCc-eeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 998876543321111 1246778777 8888875432 247777765433 2344442111 12345
Q ss_pred eeEecC--EEEEEec----CCCeEEEEeccCC--C-ceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecC--CccEE
Q psy14258 266 ITVFEN--NLFVTSW----RNQSIIRVNKFNS--D-DYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKG--KPAII 334 (440)
Q Consensus 266 l~~~~~--~ly~td~----~~~~i~~~~~~~g--~-~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~--~~~~I 334 (440)
+++..| +|+++.. .+..|+.++..++ + ...+.......... +.+ ..+.+++.++. .+.+|
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~--------dg~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF-VDG--------VGDQLWFVSGDGAPLKKI 343 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE-EEE--------ETTEEEEEECTTCTTCEE
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE-Eec--------cCCEEEEEECCCCCCCEE
Confidence 555543 6666553 2457888887665 3 33333222211111 111 11233444432 24679
Q ss_pred EEEEcCCCCCCceeeeeecCCCC-ceEEEEEcCCCEEEEEECC--CCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCC
Q psy14258 335 KGLTFKRDGTTEQAIMPITDLKR-PSVIDYHEKEEYIYYAELT--SYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMAN 411 (440)
Q Consensus 335 ~~i~~~~~~~~~~~~~~~~~~~~-p~~l~~d~~~~~vy~~d~~--~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~ 411 (440)
+.+++++.. ......+..... ..+++++ +++++++-.. ...|+.++++|.....+...+...+.+++++..++
T Consensus 344 ~~~d~~~~~--~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 344 VRVDLSGST--PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDR 419 (741)
T ss_dssp EEEECSSSS--CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCS
T ss_pred EEEeCCCCc--cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCC
Confidence 889887641 111112222211 2345554 6778887543 44688888877544333222345677888887777
Q ss_pred cEEEEeCC---CCeEEEEEeCC
Q psy14258 412 NLYWTDAG---IGTINVAKISD 430 (440)
Q Consensus 412 ~lYwtd~~---~~~I~~~~~~g 430 (440)
.|+++-.. -.+|..+++.+
T Consensus 420 ~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 420 HAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp CEEEEEEETTEEEEEEEEETTT
T ss_pred EEEEEEcCCCCCCEEEEEECCC
Confidence 78766322 25788888766
No 225
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.25 Score=46.05 Aligned_cols=254 Identities=8% Similarity=-0.055 Sum_probs=136.6
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE--ecCccCceEEEEeCC--CCEEEEEeCCCCcEEEEE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV--THKIVYPYGVTVDFP--TKHVYWVDTYLDFIDRIN 245 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~--~~~~~~P~gl~vD~~--~~~ly~~d~~~~~i~~~~ 245 (440)
.......+++.|...+|..+... +.|...++++.....+. ...-.....+++.+. +..|+.+. ..+.|...+
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iwd 85 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-YDGKVLIWK 85 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-TTSCEEEEE
T ss_pred CcccEEEEEEcCCCCEEEEEECC---CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-cCCEEEEEE
Confidence 34567889999865555555443 46777777643332222 122334567888655 55555554 456788777
Q ss_pred ccCCCcEEEec-CCccCceeeeeEec---CEEEEEecCCCeEEEEeccCCCceE--EEecCC-CCeEEEEeccCCC-CCC
Q psy14258 246 YDGTDRKTIRK-GFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNSDDYE--TIANFS-RPFAIHIYHRQKQ-PDA 317 (440)
Q Consensus 246 ~dG~~~~~i~~-~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g~~~~--~~~~~~-~p~~~~v~~~~~q-p~~ 317 (440)
+.......+.. .........+++.. +.++++-...+.|...+..++.... .+.... ....+.+. +... +..
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~~~ 164 (379)
T 3jrp_A 86 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA-PATIEEDG 164 (379)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC-CCC-----
T ss_pred cCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEc-Cccccccc
Confidence 76654222222 11133456777764 3344444457777777766553322 222222 22333332 2110 000
Q ss_pred C---CCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCC--CEEEEEECCCCeEEEEecCCCC--
Q psy14258 318 L---KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKE--EYIYYAELTSYVIERRKMFGRG-- 389 (440)
Q Consensus 318 ~---~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~--~~vy~~d~~~~~I~r~~~~g~~-- 389 (440)
. .+++.++++-+..+.|+..++............+.. -....+++|.+.+ +.++.+-...+.|...++....
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~ 244 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 244 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCcc
Confidence 0 112233333333477888887654111112222222 2346689999984 4455555577888888887542
Q ss_pred -eEEEEEC--CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 390 -KEVVIDT--GIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 390 -~~~~~~~--~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
...+... .-..+..+++.+.+..|+.+.. .+.|.+.+++
T Consensus 245 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 245 WKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred ceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 2222221 2345788999988887776654 6789888876
No 226
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.91 E-value=0.26 Score=45.70 Aligned_cols=142 Identities=10% Similarity=0.028 Sum_probs=85.3
Q ss_pred ccce-eeeecCCcEEEe--c------eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC------------
Q psy14258 135 DGTE-RFPMVTHKIVYP--E------AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA------------ 193 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~--~------~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~------------ 193 (440)
.+.. ++.+.++.|+++ . .|.+.++++...+.+.... . ..+++..|...+|+++....
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 4555 777778878877 1 3888898887666555433 2 78899998777788875320
Q ss_pred ------------CCCcEEEEeCCCCCc-eeEEecCccCceEEEEeCCCCEEEEEeCC--------CCcEEEEEccCCCcE
Q psy14258 194 ------------TRPMLERSLLDGTER-FPMVTHKIVYPYGVTVDFPTKHVYWVDTY--------LDFIDRINYDGTDRK 252 (440)
Q Consensus 194 ------------~~~~I~r~~~dG~~~-~~l~~~~~~~P~gl~vD~~~~~ly~~d~~--------~~~i~~~~~dG~~~~ 252 (440)
...+|++.++++... +.+.. . ....+++.+.+ .+|.+... ...|+.++ .| ..+
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~-~~~ 211 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DG-KEE 211 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TT-EEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC-CC-ceE
Confidence 014788899987655 44433 2 56778888666 55555432 23677777 33 333
Q ss_pred EEecCCccCceeeeeEecCEEEEEecC-------CCeEEEEe
Q psy14258 253 TIRKGFPVQNLYDITVFENNLFVTSWR-------NQSIIRVN 287 (440)
Q Consensus 253 ~i~~~~~~~~p~gl~~~~~~ly~td~~-------~~~i~~~~ 287 (440)
.+..+ .....++-++..|++.... ...|+.++
T Consensus 212 ~l~~~---~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 212 KMFEK---VSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEE---ESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EeccC---cceeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 33332 1112234455667665432 35677777
No 227
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.24 Score=44.87 Aligned_cols=236 Identities=8% Similarity=-0.054 Sum_probs=136.0
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD 247 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d 247 (440)
........++++ |..++|+..... +.|...+++...........-.....+++.+.+..|+.+. ..+.|...++.
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~d---g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~~~~~~ 89 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRD---GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGG-KDTMINGVPLF 89 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETT---SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEE-TTSCEEEEETT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcC---CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEec-CCCeEEEEEee
Confidence 334456788888 655566655544 5788888866554444444455678899998777777665 45677777764
Q ss_pred CCC----cEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCce
Q psy14258 248 GTD----RKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPST 322 (440)
Q Consensus 248 G~~----~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~ 322 (440)
... ...+ .+ .......+++.++.++... .++.|...+ .++....+.... ....+....+. ..
T Consensus 90 ~~~~~~~~~~~-~~-~~~~i~~~~~~~~~l~~~~-~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~--------~~ 156 (313)
T 3odt_A 90 ATSGEDPLYTL-IG-HQGNVCSLSFQDGVVISGS-WDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFS--------EN 156 (313)
T ss_dssp CCTTSCC-CEE-CC-CSSCEEEEEEETTEEEEEE-TTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETT--------TT
T ss_pred ecCCCCcccch-hh-cccCEEEEEecCCEEEEEe-CCCCEEEEc--CCcEEEecccCCCceeEEEEccCC--------CC
Confidence 321 2222 21 1334567777666655554 467777666 333333333322 33445444211 12
Q ss_pred eEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCee
Q psy14258 323 FLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVE 402 (440)
Q Consensus 323 ~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~ 402 (440)
+|+.+ +..+.|+..+.... ........-.....+++.+.+. +++-...+.|+..++............-..+.
T Consensus 157 ~l~~~-~~d~~i~i~d~~~~----~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~ 229 (313)
T 3odt_A 157 KFLTA-SADKTIKLWQNDKV----IKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTGDVLRTYEGHESFVY 229 (313)
T ss_dssp EEEEE-ETTSCEEEEETTEE----EEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred EEEEE-ECCCCEEEEecCce----EEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCchhhhhhhhcCCceEE
Confidence 33333 33467777762221 1111211233566899988655 45556788999999875444334444556788
Q ss_pred eEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 403 GMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 403 glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.|++.+.+ .|+ +-...+.|.+.++..
T Consensus 230 ~~~~~~~~-~l~-~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 230 CIKLLPNG-DIV-SCGEDRTVRIWSKEN 255 (313)
T ss_dssp EEEECTTS-CEE-EEETTSEEEEECTTT
T ss_pred EEEEecCC-CEE-EEecCCEEEEEECCC
Confidence 99998765 444 444567899888765
No 228
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.89 E-value=0.27 Score=45.48 Aligned_cols=284 Identities=8% Similarity=-0.033 Sum_probs=153.6
Q ss_pred cce-eeeecCCcEEEe-------ceEEEEecCCceEEEEEc-CCCCCceEEEEcCCC---CeEEEEEcCCCCCcEEEEeC
Q psy14258 136 GTE-RFPMVTHKIVYP-------EAIYFCTHYMEHCMIAID-LNLSKPRGIALDPTS---GYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 136 p~~-avD~~~~~lY~~-------~~I~~~~~dg~~~~~~~~-~~~~~P~~iavd~~~---g~lywtd~~~~~~~I~r~~~ 203 (440)
+.. ++.+.+..+..+ +.|.+.++++.....+.. ........+++.|.. .+|+..... +.|...++
T Consensus 21 v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d---g~i~iwd~ 97 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG---GNLHIWNL 97 (357)
T ss_dssp EEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT---SCEEEECT
T ss_pred eEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC---CeEEEEeC
Confidence 344 555444444444 257777777654432222 234567899999963 444444433 57888888
Q ss_pred CCCC-ceeEEecCccCceEEE------EeCCCCEEEEEeCCCCcEEEEEccCCC--cEEEecCC--ccCceeeee----E
Q psy14258 204 DGTE-RFPMVTHKIVYPYGVT------VDFPTKHVYWVDTYLDFIDRINYDGTD--RKTIRKGF--PVQNLYDIT----V 268 (440)
Q Consensus 204 dG~~-~~~l~~~~~~~P~gl~------vD~~~~~ly~~d~~~~~i~~~~~dG~~--~~~i~~~~--~~~~p~gl~----~ 268 (440)
+... ....+...-.....+. +.+.+..|+.+. ..+.|...++.... ...+.... .......++ +
T Consensus 98 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 98 EAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS-RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE-TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe-CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 7654 2223322223344553 344455555554 56678888876543 33332211 011334444 2
Q ss_pred e-cCEEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCce
Q psy14258 269 F-ENNLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQ 347 (440)
Q Consensus 269 ~-~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~ 347 (440)
. .+.++++-...+.|...+..+++.............+.+. |... ...+|+.+ +..+.|+..++........
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~-~~~~-----~~~~l~~~-~~dg~i~i~d~~~~~~~~~ 249 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFD-RKDI-----SMNKLVAT-SLEGKFHVFDMRTQHPTKG 249 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEES-CSSS-----SCCEEEEE-ESTTEEEEEEEEEEETTTE
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcC-CCCC-----CCCEEEEE-CCCCeEEEEeCcCCCcccc
Confidence 2 2344444455678888887666543332222233444333 1100 12344444 3347888777755411111
Q ss_pred ee-eee-cCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCe-----------------EE--EEECCCCCeeeEEE
Q psy14258 348 AI-MPI-TDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGK-----------------EV--VIDTGIYNVEGMAV 406 (440)
Q Consensus 348 ~~-~~~-~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~-----------------~~--~~~~~~~~~~glAv 406 (440)
.. ... ........+++.+.+..++++-...+.|+..++..... +. .....-..+..|++
T Consensus 250 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~ 329 (357)
T 3i2n_A 250 FASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDW 329 (357)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEE
T ss_pred eeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEE
Confidence 11 011 22335678999997765677766778888777653211 11 12234456889999
Q ss_pred ecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 407 DWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 407 D~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.+.++.|.++-...+.|.+.++..
T Consensus 330 s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 330 SPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CSSSTTEEEEEETTSEEEEEEECC
T ss_pred cCCCCeEEEEecCCCcEEEEECCC
Confidence 998888887766678999998864
No 229
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.89 E-value=0.27 Score=45.40 Aligned_cols=271 Identities=9% Similarity=0.003 Sum_probs=149.5
Q ss_pred cce-eeeecCCcEEEe----ceEEEEecCCce-----EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC
Q psy14258 136 GTE-RFPMVTHKIVYP----EAIYFCTHYMEH-----CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG 205 (440)
Q Consensus 136 p~~-avD~~~~~lY~~----~~I~~~~~dg~~-----~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG 205 (440)
+.. ++.+..+++..+ +.|.+-++.+.. ....+.........+++.|...+|+-.... +.|...++..
T Consensus 20 V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D---~~v~~wd~~~ 96 (319)
T 3frx_A 20 VTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWD---KTLRLWDVAT 96 (319)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEETTT
T ss_pred EEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCC---CEEEEEECCC
Confidence 344 555445456655 556665554321 111222344567889999865555554444 5788888764
Q ss_pred CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec-------CEEEEEec
Q psy14258 206 TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE-------NNLFVTSW 278 (440)
Q Consensus 206 ~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~-------~~ly~td~ 278 (440)
......+...-.....+++++.+..|+-+ ...+.|..-++.+.....+... ......+++.. +.++.+-.
T Consensus 97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-s~D~~i~vwd~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~~~~l~s~~ 173 (319)
T 3frx_A 97 GETYQRFVGHKSDVMSVDIDKKASMIISG-SRDKTIKVWTIKGQCLATLLGH--NDWVSQVRVVPNEKADDDSVTIISAG 173 (319)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSCEEEEE-ETTSCEEEEETTSCEEEEECCC--SSCEEEEEECCC------CCEEEEEE
T ss_pred CCeeEEEccCCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCeEEEEecc--CCcEEEEEEccCCCCCCCccEEEEEe
Confidence 43322333333456788898666655544 4566788888877655444322 22234444432 23455555
Q ss_pred CCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCC
Q psy14258 279 RNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKR 357 (440)
Q Consensus 279 ~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~ 357 (440)
..+.|...+..+++....+..-. ....+.+. |++.++++-+..+.|+..++... .....+..-..
T Consensus 174 ~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~s----------p~g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~ 239 (319)
T 3frx_A 174 NDKMVKAWNLNQFQIEADFIGHNSNINTLTAS----------PDGTLIASAGKDGEIMLWNLAAK----KAMYTLSAQDE 239 (319)
T ss_dssp TTSCEEEEETTTTEEEEEECCCCSCEEEEEEC----------TTSSEEEEEETTCEEEEEETTTT----EEEEEEECCSC
T ss_pred CCCEEEEEECCcchhheeecCCCCcEEEEEEc----------CCCCEEEEEeCCCeEEEEECCCC----cEEEEecCCCc
Confidence 66777777765544333332222 23334332 34444554444588988888665 33333333345
Q ss_pred ceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECC--------CCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 358 PSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTG--------IYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 358 p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~--------~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
...++|.+.+..+..+. .+.|...+++........... -..+..||+.+.++.|+-. ...+.|.+-++.
T Consensus 240 v~~~~~sp~~~~la~~~--~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg-~~Dg~i~vWd~~ 316 (319)
T 3frx_A 240 VFSLAFSPNRYWLAAAT--ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAG-YTDNVIRVWQVM 316 (319)
T ss_dssp EEEEEECSSSSEEEEEE--TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEE-ETTSCEEEEEEE
T ss_pred EEEEEEcCCCCEEEEEc--CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEe-ecCceEEEEEEe
Confidence 67999999888776664 345666666642211111111 1235678998877766654 446778887764
No 230
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.87 E-value=0.00056 Score=50.26 Aligned_cols=38 Identities=37% Similarity=0.766 Sum_probs=28.8
Q ss_pred CCCceeecccCCCCCCCC-CCcccCCCceEEc-cCCeeee
Q psy14258 7 NKTQCVDADECLIDGSCD-QTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 7 ~~~~C~d~~~C~~~~~Cs-~~C~n~~~~~~C~-~~g~~l~ 44 (440)
+++.|+|++||.....|. +.|.|++++|+|. +.||.+.
T Consensus 37 ~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 37 AGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp ETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred CCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeC
Confidence 466788888887555675 4788888888888 8888764
No 231
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.85 E-value=0.3 Score=45.30 Aligned_cols=263 Identities=4% Similarity=-0.167 Sum_probs=141.6
Q ss_pred ceEEEEecCC-ceEEEEEc----CCCCCceEEEEcCCC---CeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEE
Q psy14258 151 EAIYFCTHYM-EHCMIAID----LNLSKPRGIALDPTS---GYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGV 222 (440)
Q Consensus 151 ~~I~~~~~dg-~~~~~~~~----~~~~~P~~iavd~~~---g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl 222 (440)
+.|.+.++.. .....+-. .......+++..|.. |.++.+-... +.|...+++.......+...-.....+
T Consensus 44 ~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d--g~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 44 NRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR--GIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp TEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT--CEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred CEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC--CEEEEEEchhceEeeeecCCCCcEEEE
Confidence 6788888773 33333321 122457888888852 3444443333 588888887544433344344567889
Q ss_pred EEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec--CCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEec
Q psy14258 223 TVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK--GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIAN 299 (440)
Q Consensus 223 ~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~--~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~ 299 (440)
++.+.++.++.+-...+.|...++.......... .........+++..+ ..+++-..++.|...+..+++....+..
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccce
Confidence 9987344444444456788888886544433331 111345677777644 3444444567777777655433211110
Q ss_pred -----------------------------CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCC-----
Q psy14258 300 -----------------------------FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTT----- 345 (440)
Q Consensus 300 -----------------------------~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~----- 345 (440)
......+... ..+| ++-+..+.|+..++......
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-----------~~~l-~~~~~d~~i~~wd~~~~~~~~~~~~ 269 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL-----------GDLI-LSKSCENAIVCWKPGKMEDDIDKIK 269 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-----------TTEE-EEECSSSEEEEEEESSTTCCGGGCC
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-----------CCEE-EEEecCCEEEEEeCCCccccccccc
Confidence 0001111111 1233 33334578888887654110
Q ss_pred --c---eeeeeecC-CCCceEEEEEcC--CCEEEEEECCCCeEEEEecCCCCe---E-EEEECC--CCCeeeEEEecCCC
Q psy14258 346 --E---QAIMPITD-LKRPSVIDYHEK--EEYIYYAELTSYVIERRKMFGRGK---E-VVIDTG--IYNVEGMAVDWMAN 411 (440)
Q Consensus 346 --~---~~~~~~~~-~~~p~~l~~d~~--~~~vy~~d~~~~~I~r~~~~g~~~---~-~~~~~~--~~~~~glAvD~~~~ 411 (440)
. .....+.. -.....+++.+. +..|+. -...+.|+..++..... . ...... -..+..|++.+.++
T Consensus 270 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~-~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 348 (366)
T 3k26_A 270 PSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLAL-GNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS 348 (366)
T ss_dssp TTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEE-ECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS
T ss_pred cCCcchheeccccccCCcEEEEEEcCCCCCcEEEE-EecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC
Confidence 0 11111111 123457788887 665544 45678899998876421 1 122222 36789999998666
Q ss_pred cEEEEeCCCCeEEEEEeC
Q psy14258 412 NLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 412 ~lYwtd~~~~~I~~~~~~ 429 (440)
.|..+ ...+.|.+.++.
T Consensus 349 ~l~s~-~~dg~i~iwd~~ 365 (366)
T 3k26_A 349 ILIAV-CDDASIWRWDRL 365 (366)
T ss_dssp EEEEE-ETTSEEEEEEC-
T ss_pred eEEEE-eCCCEEEEEEec
Confidence 55544 446788887763
No 232
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.84 E-value=0.61 Score=48.77 Aligned_cols=277 Identities=8% Similarity=-0.024 Sum_probs=137.1
Q ss_pred eeeecCCcEEEe------------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCC
Q psy14258 139 RFPMVTHKIVYP------------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT 206 (440)
Q Consensus 139 avD~~~~~lY~~------------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~ 206 (440)
++.+.++.|.++ +.+.+.++.+...+.+. .........+..|...+|.++.. ..|+..++++.
T Consensus 68 ~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~-~~~~~~~~~~~SPdG~~la~~~~----~~i~~~~~~~~ 142 (740)
T 4a5s_A 68 SISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYVWN----NDIYVKIEPNL 142 (740)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCTTEEEEEECSSTTCEEEEET----TEEEEESSTTS
T ss_pred EECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc-cCCCcceeeEECCCCCEEEEEEC----CeEEEEECCCC
Confidence 566777777766 24567888877655432 22345678888887667777642 37888887765
Q ss_pred CceeEEecC------------------ccCceEEEEeCCCCEEEEEe--CCCC---------------------------
Q psy14258 207 ERFPMVTHK------------------IVYPYGVTVDFPTKHVYWVD--TYLD--------------------------- 239 (440)
Q Consensus 207 ~~~~l~~~~------------------~~~P~gl~vD~~~~~ly~~d--~~~~--------------------------- 239 (440)
..+.+...+ +....+++..|.+.+|.++. ...-
T Consensus 143 ~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G 222 (740)
T 4a5s_A 143 PSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAG 222 (740)
T ss_dssp CCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTT
T ss_pred ceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCc
Confidence 544332211 11223577888888777652 1100
Q ss_pred ------cEEEEEccC---C---CcEEEecCC----ccCceeeeeEecC---EEEEEecC--CCeEEEEeccCCCc-----
Q psy14258 240 ------FIDRINYDG---T---DRKTIRKGF----PVQNLYDITVFEN---NLFVTSWR--NQSIIRVNKFNSDD----- 293 (440)
Q Consensus 240 ------~i~~~~~dG---~---~~~~i~~~~----~~~~p~gl~~~~~---~ly~td~~--~~~i~~~~~~~g~~----- 293 (440)
.|...++++ + ....+.... .-.....++...| .+++.... ...|+.++..+|+.
T Consensus 223 ~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~ 302 (740)
T 4a5s_A 223 AVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCL 302 (740)
T ss_dssp SCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEEC
T ss_pred CcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccccee
Confidence 344455554 3 222222100 0111233344322 23344332 22566777666651
Q ss_pred --eEEEecCCCCeEEEEeccCCCCCCCCCc--eeEEeec--CCccEEEEEEcCCCCCCceeeeeec-CCCCceE-EEEEc
Q psy14258 294 --YETIANFSRPFAIHIYHRQKQPDALKPS--TFLLYAK--GKPAIIKGLTFKRDGTTEQAIMPIT-DLKRPSV-IDYHE 365 (440)
Q Consensus 294 --~~~~~~~~~p~~~~v~~~~~qp~~~~~~--~~l~~~~--~~~~~I~~i~~~~~~~~~~~~~~~~-~~~~p~~-l~~d~ 365 (440)
..++..... .-+.+. ....|.- .|+ .++++.. .+...|+.+++++. .. ..+. +--.... +.+|
T Consensus 303 ~~~~l~~~~~~-~~v~~~-~~~~p~f-spDG~~l~~~~s~~~G~~~l~~~~~~~~-~~----~~lT~g~~~v~~~~~~d- 373 (740)
T 4a5s_A 303 VARQHIEMSTT-GWVGRF-RPSEPHF-TLDGNSFYKIISNEEGYRHICYFQIDKK-DC----TFITKGTWEVIGIEALT- 373 (740)
T ss_dssp GGGCEEEECSS-SCSSSS-SCCCCEE-CTTSSEEEEEEECTTSCEEEEEEETTCS-SC----EESCCSSSCEEEEEEEC-
T ss_pred EEEEeeeccCC-ceEccC-cCCCceE-cCCCCEEEEEEEcCCCceEEEEEECCCC-ce----EecccCCEEEEEEEEEe-
Confidence 111111000 000000 0001100 133 3332442 22467888888766 21 1121 1112222 3355
Q ss_pred CCCEEEEEECC------CCeEEEEecCCCCeEEEEECCC----CCeeeEEEecCCCcEEEEeCC--CCeEEEEEeCC
Q psy14258 366 KEEYIYYAELT------SYVIERRKMFGRGKEVVIDTGI----YNVEGMAVDWMANNLYWTDAG--IGTINVAKISD 430 (440)
Q Consensus 366 ~~~~vy~~d~~------~~~I~r~~~~g~~~~~~~~~~~----~~~~glAvD~~~~~lYwtd~~--~~~I~~~~~~g 430 (440)
++.||++... ...|++++++|......+...+ ......++.+.++.+..+-.+ -..+.+.++++
T Consensus 374 -~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~~~~ 449 (740)
T 4a5s_A 374 -SDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVN 449 (740)
T ss_dssp -SSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBSSCEEEEEETTT
T ss_pred -CCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCCCCEEEEEECCC
Confidence 7899998764 3589999999865443343332 345667777766654444322 34677777664
No 233
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.72 E-value=0.42 Score=45.32 Aligned_cols=277 Identities=6% Similarity=-0.044 Sum_probs=149.5
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|.+.++.|.-+ ...+.|+..++.... .. ..+......... ++.+.++.|..+ +.|.+.+
T Consensus 68 ~V~~~~~sp~~~~l~s~-s~D~~v~iWd~~~~~--~~--------~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~ 136 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSA-SQDGRLIVWNALTSQ--KT--------HAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFN 136 (380)
T ss_dssp CEEEEEECTTSSCEEEE-ETTSEEEEEETTTTE--EE--------EEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEE
T ss_pred EEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCc--cc--------eEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEE
Confidence 48999999876655444 444666555443221 10 112223334566 777766655444 5666666
Q ss_pred cCCceE-------EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec-----CccCceEEEEe
Q psy14258 158 HYMEHC-------MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH-----KIVYPYGVTVD 225 (440)
Q Consensus 158 ~dg~~~-------~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~-----~~~~P~gl~vD 225 (440)
+..... ...+.........++..|..+..+.+-... +.|...++........+.. .......+++.
T Consensus 137 ~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D--~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 137 LSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGD--QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp CCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTT--SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred CCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCC--CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 543210 001111223345556666544444443332 4777777765444333311 12235567776
Q ss_pred CCCCEEEEEeCCCCcEEEEEcc-C-CCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCC
Q psy14258 226 FPTKHVYWVDTYLDFIDRINYD-G-TDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSR 302 (440)
Q Consensus 226 ~~~~~ly~~d~~~~~i~~~~~d-G-~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~ 302 (440)
+.++.++.+-...+.|..-++. + .....+... -.....+++..+ ..+.+-...+.|...+..+++...++.....
T Consensus 215 ~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 292 (380)
T 3iz6_a 215 SLNANMFISGSCDTTVRLWDLRITSRAVRTYHGH--EGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPD 292 (380)
T ss_dssp SSSCCEEEEEETTSCEEEEETTTTCCCCEEECCC--SSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCS
T ss_pred cCCCCEEEEEECCCeEEEEECCCCCcceEEECCc--CCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccc
Confidence 6566777766677788888875 2 333333221 234567787755 5666767788888888877766554432110
Q ss_pred --------CeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee-----cCCCCceEEEEEcCCCE
Q psy14258 303 --------PFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI-----TDLKRPSVIDYHEKEEY 369 (440)
Q Consensus 303 --------p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-----~~~~~p~~l~~d~~~~~ 369 (440)
...+.+. |++.++++-...+.|+..++... +....+ ..-.....++|.+.+..
T Consensus 293 ~~~~~~~~v~~~~~s----------~~g~~l~~g~~dg~i~vwd~~~~----~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 293 RNDNELPIVTSVAFS----------ISGRLLFAGYSNGDCYVWDTLLA----EMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp SSCCSSCSCSEEEEC----------SSSSEEEEECTTSCEEEEETTTC----CEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred ccccccCceEEEEEC----------CCCCEEEEEECCCCEEEEECCCC----ceEEEEecccCCCCCceEEEEECCCCCE
Confidence 1222222 34344444444578888886544 122222 12234568999997775
Q ss_pred EEEEECCCCeEEEEecCCC
Q psy14258 370 IYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 370 vy~~d~~~~~I~r~~~~g~ 388 (440)
| ++-...++|..-++.+.
T Consensus 359 l-~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 359 L-CTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp E-EEECTTSCEEEEECCSS
T ss_pred E-EEeeCCCCEEEEecCCC
Confidence 4 55556788877777653
No 234
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.69 E-value=0.014 Score=58.41 Aligned_cols=108 Identities=8% Similarity=0.008 Sum_probs=75.6
Q ss_pred ccccccce-eeeecCCcEEEe-------------------------ceEEEEecCCce-------EEE-EEc--------
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP-------------------------EAIYFCTHYMEH-------CMI-AID-------- 168 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~-------------------------~~I~~~~~dg~~-------~~~-~~~-------- 168 (440)
..+..|++ ++++.++.||++ +.|.+...++.. -.. ++.
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 44678999 999999999998 137777665421 122 221
Q ss_pred ------------CCCCCceEEEEcCCCCeEEE-EEcCCC---------CCcEEEEeCCCCCceeEEecC-ccCceEEEEe
Q psy14258 169 ------------LNLSKPRGIALDPTSGYMFF-TKWGAT---------RPMLERSLLDGTERFPMVTHK-IVYPYGVTVD 225 (440)
Q Consensus 169 ------------~~~~~P~~iavd~~~g~lyw-td~~~~---------~~~I~r~~~dG~~~~~l~~~~-~~~P~gl~vD 225 (440)
..+..|.+|++|+ .|.||+ ||.... ...+++.+.+....+.++... ...|+|+++.
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafS 539 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred ccccCccCccccCccCCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEEC
Confidence 1267899999999 699999 775310 137899988644444455433 4579999999
Q ss_pred CCCCEEEEEeCCCC
Q psy14258 226 FPTKHVYWVDTYLD 239 (440)
Q Consensus 226 ~~~~~ly~~d~~~~ 239 (440)
+.+..||++-.+-+
T Consensus 540 PD~ktLfV~vQHPG 553 (592)
T 4a9v_A 540 PDQKTLFVGIQHPG 553 (592)
T ss_dssp TTSSEEEEEEESTT
T ss_pred CCCCEEEEEEeCCC
Confidence 99999999865433
No 235
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=96.69 E-value=0.016 Score=58.10 Aligned_cols=108 Identities=16% Similarity=0.151 Sum_probs=75.7
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCC-------------------CCcEEEEeCCCCCc-------eeEEe----------
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGAT-------------------RPMLERSLLDGTER-------FPMVT---------- 213 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~-------------------~~~I~r~~~dG~~~-------~~l~~---------- 213 (440)
.+..|++|+++|.+|.||++-.+.. .+.|+|...++... ..++.
T Consensus 382 ~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~~ 461 (592)
T 4a9v_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred cccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCcccccc
Confidence 5678999999999999999954321 26799998866431 11221
Q ss_pred -----------cCccCceEEEEeCCCCEEEE-EeCC-----------CCcEEEEEccCCCcEEEecCCccCceeeeeEec
Q psy14258 214 -----------HKIVYPYGVTVDFPTKHVYW-VDTY-----------LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE 270 (440)
Q Consensus 214 -----------~~~~~P~gl~vD~~~~~ly~-~d~~-----------~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~ 270 (440)
..+..|++|++| ..+.||+ +|.. .+.+++++.+...++.++.......|.|+++..
T Consensus 462 ~~~g~~~~~~~~~fnsPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSP 540 (592)
T 4a9v_A 462 PKGGSSNITPQNMFNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSP 540 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECT
T ss_pred cccCccCccccCccCCCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECC
Confidence 026789999999 5689999 7753 237888887655666665533356789999876
Q ss_pred C--EEEEEec
Q psy14258 271 N--NLFVTSW 278 (440)
Q Consensus 271 ~--~ly~td~ 278 (440)
| .||++-.
T Consensus 541 D~ktLfV~vQ 550 (592)
T 4a9v_A 541 DQKTLFVGIQ 550 (592)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 5 8888754
No 236
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.68 E-value=0.46 Score=45.92 Aligned_cols=202 Identities=7% Similarity=0.024 Sum_probs=112.2
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec--CccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH--KIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~--~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
....+|+..|.++.+..+-... +.|...+++......+... .-....+|++.+.++.++++-...+.|..-++.+.
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~d--g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKG--GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETT--SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCEEEEEEeCCCCCEEEEEeCC--CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 3467899998766655543332 5788888876555444432 13346789998766555555566778888888877
Q ss_pred CcEEEecCCcc-CceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCc-eeEE
Q psy14258 250 DRKTIRKGFPV-QNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPS-TFLL 325 (440)
Q Consensus 250 ~~~~i~~~~~~-~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~-~~l~ 325 (440)
....+...... .....+++..+ .++++-...+.|...+.. ++....+..-. ....+.+. |. ..++
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~----------p~~~~~~ 266 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALN----------PCCDWFL 266 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEEC----------TTCSSEE
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeec----------CCCceEE
Confidence 66665543211 22345666654 455555557777777753 43332222211 22334332 22 3344
Q ss_pred eecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCC
Q psy14258 326 YAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 326 ~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g 387 (440)
++-+..+.|+..++...............-....+++|++.+.+|.-+ ...+.|+..++..
T Consensus 267 ~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~-~~D~~i~iwd~~~ 327 (435)
T 4e54_B 267 ATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT-DQKSEIRVYSASQ 327 (435)
T ss_dssp EEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE-ESSSCEEEEESSS
T ss_pred EEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE-cCCCEEEEEECCC
Confidence 443344677777775541111111111112234578888877766544 4577787777654
No 237
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.65 E-value=0.00039 Score=51.80 Aligned_cols=42 Identities=36% Similarity=0.646 Sum_probs=35.0
Q ss_pred ceec-CCCCceeecccCCCCCCCCCCcccCCCceEEc-c--CCeeee
Q psy14258 2 TFRG-PNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-D--EGFSFQ 44 (440)
Q Consensus 2 ~~~~-~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~--~g~~l~ 44 (440)
||.+ ++++.|+|++||.. +.|.+.|.|++++|.|. + +||.+.
T Consensus 32 G~~~~~~g~~C~dideC~~-~~C~~~C~n~~g~y~C~C~g~~G~~~~ 77 (87)
T 1z6c_A 32 GYRYNLKSKSCEDIDECSE-NMCAQLCVNYPGGYTCYCDGKKGFKLA 77 (87)
T ss_dssp TCEEETTTTEEECCCHHHH-SCCSSEECCCSSSCCEECCSSSCCBCC
T ss_pred CceECCCCCcCCCcCeeCC-CCCCCEEEccCCCEEEECCCCcCCccc
Confidence 5665 67889999999975 67999999999999999 7 577654
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.61 E-value=0.92 Score=47.80 Aligned_cols=334 Identities=7% Similarity=-0.076 Sum_probs=175.3
Q ss_pred eEEEecCCCcee-eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-e
Q psy14258 62 FGPMDIEEWDEG-LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-R 139 (440)
Q Consensus 62 I~~~~l~~~~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-a 139 (440)
|.+++....... .........+.++..|.. +.||+.... +.|++.+........+......+.. + .-..+.. +
T Consensus 195 l~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~-g~lwigt~~-~Gl~~~~~~~~~~~~~~~~~~~~~~-l--~~~~i~~i~ 269 (795)
T 4a2l_A 195 LYTYSITQKTFEKVIPILGTKQIQAILQQSP-TRIWVATEG-AGLFLINPKTKEIKNYLHSPSNPKS-I--SSNYIRSLA 269 (795)
T ss_dssp EEEEETTTCCEEECC----CCCEEEEEEEET-TEEEEEEBS-SCEEEEETTTTEEEEECCCTTCTTS-C--SCSBEEEEE
T ss_pred EEEEeCCCCeEEEecCCCCCCeeEEEEEcCC-CCEEEEECC-CCeEEEeCCCCeEEEeecCCCCccc-c--CCCeEEEEE
Confidence 777776544433 111111123778888764 667766544 3466665443222211000000000 0 1123555 6
Q ss_pred eeecCCcEEEe--ceEEEEecCCceEEEEEcC-----C--CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCcee
Q psy14258 140 FPMVTHKIVYP--EAIYFCTHYMEHCMIAIDL-----N--LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFP 210 (440)
Q Consensus 140 vD~~~~~lY~~--~~I~~~~~dg~~~~~~~~~-----~--~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~ 210 (440)
.|. .++|++. +.+.+.+........+... . .....+|..|+ .|.|++...+ ..|.+.+......+.
T Consensus 270 ~d~-~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~lWigt~~---~Gl~~~~~~~~~~~~ 344 (795)
T 4a2l_A 270 MDS-QNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDS-QGGMWLGTYF---GGLNYYHPIRNRFKN 344 (795)
T ss_dssp ECT-TSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECT-TSCEEEEESS---SCEEEECGGGGSSEE
T ss_pred EcC-CCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeC-CcCEEEEECC---CCeEEeCCCcccceE
Confidence 664 3446665 5677777776554444221 1 24578999998 6888887765 368887765443332
Q ss_pred EEec----C--ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCC-------ccCceeeeeEecC-E-EEE
Q psy14258 211 MVTH----K--IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGF-------PVQNLYDITVFEN-N-LFV 275 (440)
Q Consensus 211 l~~~----~--~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~-------~~~~p~gl~~~~~-~-ly~ 275 (440)
+... . -.....|..| ..++|++... .+-|.+++......+...... ......++..+.+ . ||+
T Consensus 345 ~~~~~~~~~l~~~~V~~i~~d-~~g~lWiGt~-~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi 422 (795)
T 4a2l_A 345 IRNIPYKNSLSDNVVSCIVED-KDKNLWIGTN-DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI 422 (795)
T ss_dssp ECCCTTSSSCSCSSEEEEEEC-TTSCEEEEES-SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE
T ss_pred EcCCCCCCCCCCCeeEEEEEC-CCCCEEEEEC-CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE
Confidence 2211 1 1235678888 5677777643 345777776654444332210 1134567777644 6 666
Q ss_pred EecCCCeEEEEeccCCCceEEEecC---C--CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeee
Q psy14258 276 TSWRNQSIIRVNKFNSDDYETIANF---S--RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIM 350 (440)
Q Consensus 276 td~~~~~i~~~~~~~g~~~~~~~~~---~--~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~ 350 (440)
... .+.|.++++.+++........ . ....+... +++.|+++.. ..+.+++.+.. ... ..
T Consensus 423 gt~-~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d----------~~g~lwigt~--~Gl~~~~~~~~-~~~--~~ 486 (795)
T 4a2l_A 423 GTH-AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPD----------GEGNLWLGTL--SALVRFNPEQR-SFT--TI 486 (795)
T ss_dssp EET-TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEEC----------SSSCEEEEES--SCEEEEETTTT-EEE--EC
T ss_pred EeC-cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEEC----------CCCCEEEEec--CceeEEeCCCC-eEE--Ec
Confidence 543 467889988766533322111 0 11222211 2456777665 56777776543 110 01
Q ss_pred eec----CC--CCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE----CCC--CCeeeEEEecCCCcEEEEeC
Q psy14258 351 PIT----DL--KRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID----TGI--YNVEGMAVDWMANNLYWTDA 418 (440)
Q Consensus 351 ~~~----~~--~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~----~~~--~~~~glAvD~~~~~lYwtd~ 418 (440)
... .+ ....++..|.. +.++++.. +-+++.+.++... .+.. .++ ..+..|+.|. .++||++..
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~-g~lWigt~--~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~-~g~lWigT~ 561 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSH-KRLWIGGE--EGLSVFKQEGLDI-QKASILPVSNVTKLFTNCIYEAS-NGIIWVGTR 561 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTT-CCEEEEES--SCEEEEEEETTEE-EECCCSCSCGGGGSCEEEEEECT-TSCEEEEES
T ss_pred cccccccccCCceEEEEEECCC-CCEEEEeC--CceEEEeCCCCeE-EEecCCCCCCCCCCeeEEEEECC-CCCEEEEeC
Confidence 100 11 24567888865 55877764 6688988875432 2211 111 3567889985 566887765
Q ss_pred CCCeEEEEEeCC
Q psy14258 419 GIGTINVAKISD 430 (440)
Q Consensus 419 ~~~~I~~~~~~g 430 (440)
+ .|.+++...
T Consensus 562 ~--Gl~~~d~~~ 571 (795)
T 4a2l_A 562 E--GFYCFNEKD 571 (795)
T ss_dssp S--CEEEEETTT
T ss_pred C--CceeECCCC
Confidence 3 577777655
No 239
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.58 E-value=0.00048 Score=54.60 Aligned_cols=43 Identities=21% Similarity=0.400 Sum_probs=36.7
Q ss_pred ceecCCCCceeecccCCCCCCCCCCcccCCCceEEc-cCCeeee
Q psy14258 2 TFRGPNKTQCVDADECLIDGSCDQTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~~~~Cs~~C~n~~~~~~C~-~~g~~l~ 44 (440)
||.+..++.|+|++||...+.|.+.|.|++++|.|. +.||.+.
T Consensus 68 Gy~~~~g~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 68 GYILDDGFICTDIDECENGGFCSGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp TEEEETTTEEEECCHHHHCSSCSSEEEECSSSEEEEECSSSSCE
T ss_pred CccCCCCCccccccccCCCCCCcCeEEeCCCCEEEECCCCCccC
Confidence 566533789999999997678989999999999999 9999864
No 240
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.54 E-value=0.93 Score=47.00 Aligned_cols=244 Identities=10% Similarity=0.065 Sum_probs=133.5
Q ss_pred ccce-eeeecCCcEEEe--------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCC----------CC
Q psy14258 135 DGTE-RFPMVTHKIVYP--------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGA----------TR 195 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~--------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~----------~~ 195 (440)
...+ ++.+.++.|-++ ..|.+.++++............ -.+++.. ....||++.... ..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k-~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~ 207 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVK-FSGISWL-GNEGFFYSSYDKPDGSELSARTDQ 207 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEE-SCCCEEE-TTTEEEEEESSCCC-------CCC
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCce-eccEEEe-CCCEEEEEEecCcccccccccCCC
Confidence 3455 777778777666 3588889887554322111110 1122332 235566664331 12
Q ss_pred CcEEEEeCCCCCc--eeEEecCc---cCceEEEEeCCCCEEEEEeCC---CCcEEEEEccCC--CcEEEecCCccCceee
Q psy14258 196 PMLERSLLDGTER--FPMVTHKI---VYPYGVTVDFPTKHVYWVDTY---LDFIDRINYDGT--DRKTIRKGFPVQNLYD 265 (440)
Q Consensus 196 ~~I~r~~~dG~~~--~~l~~~~~---~~P~gl~vD~~~~~ly~~d~~---~~~i~~~~~dG~--~~~~i~~~~~~~~p~g 265 (440)
.+|++.++..... +.+..... .+-.++.+.+.+..|+++... .+.|+.+++++. ..+.+.... -.....
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~-~~~~~~ 286 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL-DADVSL 286 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS-SSCEEE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC-CceEEE
Confidence 5699988865432 23333222 123577888888888776532 248888988655 345554421 112222
Q ss_pred eeEecCEEEEEecC---CCeEEEEeccCCCc---eEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCC--ccEEEEE
Q psy14258 266 ITVFENNLFVTSWR---NQSIIRVNKFNSDD---YETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGK--PAIIKGL 337 (440)
Q Consensus 266 l~~~~~~ly~td~~---~~~i~~~~~~~g~~---~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~--~~~I~~i 337 (440)
+.-+++.||+.... +.+|++++..++.. ..++.......++..+ +.+|++.... ..+|+.+
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~s~~-----------g~~lv~~~~~~g~~~l~~~ 355 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVLTVHSG-----------SGYLFAEYMVDATARVEQF 355 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEE-----------TTEEEEEEEETTEEEEEEE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEEEEEEE-----------CCEEEEEEEECCeeEEEEE
Confidence 55677888876543 46899998876654 3333322222222222 2455554332 2467888
Q ss_pred EcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEEC---CCCeEEEEecCCCCeEEEEE
Q psy14258 338 TFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAEL---TSYVIERRKMFGRGKEVVID 395 (440)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~---~~~~I~r~~~~g~~~~~~~~ 395 (440)
++++. . ...+++.......++++++.++.++++-. .-.+|++.++.+...+++..
T Consensus 356 d~~g~-~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 356 DYEGK-R--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CTTSC-E--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEEEEEC
T ss_pred ECCCC-e--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEEEEEe
Confidence 87755 1 12233333333345666677787877643 24789999998765555543
No 241
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.54 E-value=0.63 Score=44.97 Aligned_cols=285 Identities=7% Similarity=-0.044 Sum_probs=149.8
Q ss_pred eEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccceeee
Q psy14258 62 FGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFP 141 (440)
Q Consensus 62 I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~avD 141 (440)
|+..++........+..+...+.+++++ .+ +.++-...+.|+..++.... .+ ..+...-.... ++.
T Consensus 141 i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~--~~--------~~~~~h~~~v~-~~~ 206 (445)
T 2ovr_B 141 LKVWSAVTGKCLRTLVGHTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGE--CI--------HTLYGHTSTVR-CMH 206 (445)
T ss_dssp EEEEETTTCCEEEECCCCSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTE--EE--------EEECCCSSCEE-EEE
T ss_pred EEEEECCCCcEEEEEcCCCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCc--EE--------EEECCCCCcEE-EEE
Confidence 7777776444332222222238888887 34 44555555777666654321 11 01111111222 555
Q ss_pred ecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccC
Q psy14258 142 MVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVY 218 (440)
Q Consensus 142 ~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~ 218 (440)
+.++.|+.+ +.|.+.++........+.........++.|. ..|+..... +.|...++........+......
T Consensus 207 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~--~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~ 281 (445)
T 2ovr_B 207 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDG--RRVVSGAYD---FMVKVWDPETETCLHTLQGHTNR 281 (445)
T ss_dssp EETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECS--SCEEEEETT---SCEEEEEGGGTEEEEEECCCSSC
T ss_pred ecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECC--CEEEEEcCC---CEEEEEECCCCcEeEEecCCCCc
Confidence 556655544 7888888876554444444456677888743 445554443 57777777543322222222234
Q ss_pred ceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe
Q psy14258 219 PYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA 298 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~ 298 (440)
...+++ .+..|+.+. ..+.|...++..........+. ......++..++.++... .++.|...+..+++....+.
T Consensus 282 v~~~~~--~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~~~-~dg~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 282 VYSLQF--DGIHVVSGS-LDTSIRVWDVETGNCIHTLTGH-QSLTSGMELKDNILVSGN-ADSTVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp EEEEEE--CSSEEEEEE-TTSCEEEEETTTCCEEEEECCC-CSCEEEEEEETTEEEEEE-TTSCEEEEETTTCCEEEEEC
T ss_pred eEEEEE--CCCEEEEEe-CCCeEEEEECCCCCEEEEEcCC-cccEEEEEEeCCEEEEEe-CCCeEEEEECCCCcEEEEEc
Confidence 456666 355665554 5678888887544433323321 334567777776555544 57788888877776655554
Q ss_pred cCC----CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee------cCCCCceEEEEEcCCC
Q psy14258 299 NFS----RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI------TDLKRPSVIDYHEKEE 368 (440)
Q Consensus 299 ~~~----~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~------~~~~~p~~l~~d~~~~ 368 (440)
... ....+... ..+|+.+ +..+.|+..++... .....+ ..-....++++++.+.
T Consensus 357 ~~~~~~~~v~~~~~~-----------~~~l~s~-~~dg~v~iwd~~~~----~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFN-----------KNFVITS-SDDGTVKLWDLKTG----EFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp STTSCSSCEEEEEEC-----------SSEEEEE-ETTSEEEEEETTTC----CEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred cCCCCCCCEEEEEEC-----------CCEEEEE-eCCCeEEEEECCCC----ceeeeeeccccCCCCceEEEEEecCCEE
Confidence 311 12233221 1334443 33478888887655 122222 1122356888887644
Q ss_pred EEEEEECCCCe----EEEEecCC
Q psy14258 369 YIYYAELTSYV----IERRKMFG 387 (440)
Q Consensus 369 ~vy~~d~~~~~----I~r~~~~g 387 (440)
.+. +-...++ |+..+++.
T Consensus 421 ~la-~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 421 VCA-VGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEE-EECSSSSSCCEEEEEECCC
T ss_pred EEE-EcccCCCCccEEEEEECCC
Confidence 333 3334443 66666654
No 242
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.51 E-value=0.00069 Score=50.30 Aligned_cols=44 Identities=27% Similarity=0.487 Sum_probs=35.6
Q ss_pred ceec--CCCCceeecccCCC-CCCCC-CCcccCCCceEEc-cCCeeeec
Q psy14258 2 TFRG--PNKTQCVDADECLI-DGSCD-QTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 2 ~~~~--~~~~~C~d~~~C~~-~~~Cs-~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
||.+ .+++.|+|++||.. +..|. +.|.|++++|+|. +.||.+.+
T Consensus 32 Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 32 GYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp SEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCS
T ss_pred CcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCC
Confidence 5663 35789999999985 45676 5899999999999 99998754
No 243
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=96.51 E-value=0.001 Score=43.89 Aligned_cols=27 Identities=22% Similarity=0.550 Sum_probs=24.3
Q ss_pred CCCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 19 IDGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 19 ~~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
.++.|+|.|.|++++|.|. +.||.|.+
T Consensus 4 ~ng~C~~~C~n~~gs~~C~C~~Gy~L~~ 31 (51)
T 1kig_L 4 DNGGCDQFCREERSEVRCSCAHGYVLGD 31 (51)
T ss_dssp TTTSSSSCCCEETTEECCCCCTTEEECT
T ss_pred CCCCcCCEeEcCCCCeEEeCCCCcEECC
Confidence 3678999999999999999 99999865
No 244
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=96.50 E-value=0.22 Score=48.28 Aligned_cols=202 Identities=7% Similarity=-0.111 Sum_probs=116.1
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFC 156 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~ 156 (440)
++.+|+|+|....+..+-...+.|...++.......+ +.+...-....+ ++.+.+++++++ +.|.+-
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~--------~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF--------IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEE--------ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeE--------EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4999999987776666666667776655543321111 111122334555 666555656666 678888
Q ss_pred ecCCceEEEEEcCCC--CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEE
Q psy14258 157 THYMEHCMIAIDLNL--SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWV 234 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~--~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~ 234 (440)
++.+.....+..... .....++++|....|...... +.|...+++|.....+. ..-.....+++.+.+..++.+
T Consensus 193 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d---g~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 193 DFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV---GNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLAT 268 (435)
T ss_dssp ETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS---SBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEE
T ss_pred eccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC---CcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEE
Confidence 998877766654322 345689999854444443333 68999999876443322 122346788998777777766
Q ss_pred eCCCCcEEEEEccCC-CcEEEec-CCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceE
Q psy14258 235 DTYLDFIDRINYDGT-DRKTIRK-GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 235 d~~~~~i~~~~~dG~-~~~~i~~-~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
-...+.|...++... ....+.. .........+++..+ ....+-...+.|...+..++....
T Consensus 269 ~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~ 332 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPL 332 (435)
T ss_dssp EETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEE
T ss_pred ecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccce
Confidence 555666766665432 2211111 101122345666543 344444456777777766665544
No 245
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.50 E-value=0.54 Score=43.74 Aligned_cols=239 Identities=5% Similarity=-0.127 Sum_probs=130.0
Q ss_pred cccccce-eeeecCCcEEEe---ceEEEEecCCceEEE--EEcCCCCCceEEEEcCC--CCeEEEEEcCCCCCcEEEEeC
Q psy14258 132 SLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMI--AIDLNLSKPRGIALDPT--SGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 132 ~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~--~~~~~~~~P~~iavd~~--~g~lywtd~~~~~~~I~r~~~ 203 (440)
.-..+.. ++.+.++.|..+ +.|.+.++++...+. .+........++++.+. ..+|+.+... +.|...++
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d---g~v~iwd~ 86 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKE 86 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---SCEEEEEE
T ss_pred CcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC---CEEEEEEc
Confidence 3344556 777666655544 678888876433222 23334456788998765 4455555544 47777777
Q ss_pred CCCCceeE--EecCccCceEEEEeCC--CCEEEEEeCCCCcEEEEEccCCC--cEEEecCCccCceeeeeEec-------
Q psy14258 204 DGTERFPM--VTHKIVYPYGVTVDFP--TKHVYWVDTYLDFIDRINYDGTD--RKTIRKGFPVQNLYDITVFE------- 270 (440)
Q Consensus 204 dG~~~~~l--~~~~~~~P~gl~vD~~--~~~ly~~d~~~~~i~~~~~dG~~--~~~i~~~~~~~~p~gl~~~~------- 270 (440)
+......+ ..........+++.+. +..|+.+ ...+.|...++.... ....... .......+++..
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~d~~i~v~d~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCTTSCCCEEEEEC-CTTCEEEEEECCCC-----
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEe-cCCCcEEEEecCCCCceeeEEecC-CCCceEEEEEcCccccccc
Confidence 65432122 2223345778899876 5555555 456788888876542 2222222 123345666654
Q ss_pred -------CEEEEEecCCCeEEEEeccCCCceE-EEecC---C-CCeEEEEeccCCCCCCCCCc---eeEEeecCCccEEE
Q psy14258 271 -------NNLFVTSWRNQSIIRVNKFNSDDYE-TIANF---S-RPFAIHIYHRQKQPDALKPS---TFLLYAKGKPAIIK 335 (440)
Q Consensus 271 -------~~ly~td~~~~~i~~~~~~~g~~~~-~~~~~---~-~p~~~~v~~~~~qp~~~~~~---~~l~~~~~~~~~I~ 335 (440)
+.++.+-..++.|...+..+++... ....+ . ....+.+. |+ +.++++-+..+.|+
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~s----------p~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS----------PTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC----------CCCSSSEEEEEEETTSCEE
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEEC----------CCCCCCCeEEEEeCCCEEE
Confidence 4555555557777777766655432 22211 1 23334333 23 33444444457888
Q ss_pred EEEcCCCCCCceeee-eec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 336 GLTFKRDGTTEQAIM-PIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 336 ~i~~~~~~~~~~~~~-~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
..++........... ... .......++|++.+..|+.+.. .+.|+..+++
T Consensus 235 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-dg~i~iw~~~ 286 (379)
T 3jrp_A 235 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG-DNKVTLWKEN 286 (379)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES-SSSEEEEEEE
T ss_pred EEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC-CCcEEEEeCC
Confidence 888776511111111 111 2224568999998887776654 6667666665
No 246
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.48 E-value=0.67 Score=44.69 Aligned_cols=260 Identities=8% Similarity=-0.007 Sum_probs=143.0
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecC
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHK 215 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~ 215 (440)
++.+.++.|... +.|.+.++........+........+++.|. ..|+..... +.|...+++.......+...
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~sg~~d---g~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE--RVIITGSSD---STVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCS--SEEEEEETT---SCEEEEESSSCCEEEEECCC
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECC--CEEEEEcCC---CeEEEEECCCCcEEEEEcCC
Confidence 666655544444 6888888876555444444445667777643 444444433 57888887654333222222
Q ss_pred ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcE---EEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCC
Q psy14258 216 IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRK---TIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSD 292 (440)
Q Consensus 216 ~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~---~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~ 292 (440)
-.....++++ .+.|+.+ ...+.|...++...... ....+ .......+++.++.|+... .++.|...+..+++
T Consensus 213 ~~~v~~l~~~--~~~l~s~-s~dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~s~~-~dg~i~vwd~~~~~ 287 (435)
T 1p22_A 213 CEAVLHLRFN--NGMMVTC-SKDRSIAVWDMASPTDITLRRVLVG-HRAAVNVVDFDDKYIVSAS-GDRTIKVWNTSTCE 287 (435)
T ss_dssp CSCEEEEECC--TTEEEEE-ETTSCEEEEECSSSSCCEEEEEECC-CSSCEEEEEEETTEEEEEE-TTSEEEEEETTTCC
T ss_pred CCcEEEEEEc--CCEEEEe-eCCCcEEEEeCCCCCCceeeeEecC-CCCcEEEEEeCCCEEEEEe-CCCeEEEEECCcCc
Confidence 3334555553 5555554 45678888887654322 22222 1234567777666666655 47788888877776
Q ss_pred ceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEE
Q psy14258 293 DYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYI 370 (440)
Q Consensus 293 ~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~v 370 (440)
....+..-. ....+... +.+|+.+ +..+.|+..++... .....+.+ -....++++| ++.+
T Consensus 288 ~~~~~~~~~~~v~~~~~~-----------~~~l~~g-~~dg~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~--~~~l 349 (435)
T 1p22_A 288 FVRTLNGHKRGIACLQYR-----------DRLVVSG-SSDNTIRLWDIECG----ACLRVLEGHEELVRCIRFD--NKRI 349 (435)
T ss_dssp EEEEEECCSSCEEEEEEE-----------TTEEEEE-ETTSCEEEEETTTC----CEEEEECCCSSCEEEEECC--SSEE
T ss_pred EEEEEcCCCCcEEEEEeC-----------CCEEEEE-eCCCeEEEEECCCC----CEEEEEeCCcCcEEEEEec--CCEE
Confidence 655554322 22233221 1233333 33478888887654 22222222 2234577773 4544
Q ss_pred EEEECCCCeEEEEecCCCC---------eEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 371 YYAELTSYVIERRKMFGRG---------KEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 371 y~~d~~~~~I~r~~~~g~~---------~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++-...+.|...++.... ........-..+..+++| +. ...+-...++|.+.++..
T Consensus 350 -~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 350 -VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EF-QIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp -EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SS-CEEECCSSSEEEEEC---
T ss_pred -EEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC--CC-EEEEEeCCCEEEEEECCC
Confidence 455567888888875322 222233344567888885 44 455656678999999876
No 247
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.44 E-value=0.73 Score=47.70 Aligned_cols=131 Identities=6% Similarity=0.004 Sum_probs=77.8
Q ss_pred EEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeecc-c--cccce-eeeecCCcEEEe----------
Q psy14258 85 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERS-L--LDGTE-RFPMVTHKIVYP---------- 150 (440)
Q Consensus 85 ~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~-~--~~p~~-avD~~~~~lY~~---------- 150 (440)
.+.+.+.+ ++.++. ..+.|+..++.+.....+ +... . ..... ++.+.++.|.++
T Consensus 20 ~~~~s~dg-~~~~~~-~d~~i~~~~~~~g~~~~~----------~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s 87 (719)
T 1z68_A 20 FPNWISGQ-EYLHQS-ADNNIVLYNIETGQSYTI----------LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYS 87 (719)
T ss_dssp CCEESSSS-EEEEEC-TTSCEEEEESSSCCEEEE----------ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccEECCCC-eEEEEc-CCCCEEEEEcCCCcEEEE----------EccccccccceeeEEECCCCCeEEEEecCceeEEee
Confidence 44566554 333333 356777766655432221 1111 0 12566 788888877776
Q ss_pred --ceEEEEecCCceE---EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCc---------
Q psy14258 151 --EAIYFCTHYMEHC---MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKI--------- 216 (440)
Q Consensus 151 --~~I~~~~~dg~~~---~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~--------- 216 (440)
+.|.+.++++... +.+ ......++..|...+|.++.. ..|...++++.....+.....
T Consensus 88 ~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~SPDG~~la~~~~----~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 88 YTATYYIYDLSNGEFVRGNEL----PRPIQYLCWSPVGSKLAYVYQ----NNIYLKQRPGDPPFQITFNGRENKIFNGIP 159 (719)
T ss_dssp EEEEEEEEETTTTEECCSSCC----CSSBCCEEECSSTTCEEEEET----TEEEEESSTTSCCEECCCCCBTTTEEESSC
T ss_pred cceEEEEEECCCCccccceec----CcccccceECCCCCEEEEEEC----CeEEEEeCCCCCcEEEecCCCcCCeEcccc
Confidence 2577888887654 222 134678899997667777742 488888887655443332210
Q ss_pred ---------cCceEEEEeCCCCEEEEEe
Q psy14258 217 ---------VYPYGVTVDFPTKHVYWVD 235 (440)
Q Consensus 217 ---------~~P~gl~vD~~~~~ly~~d 235 (440)
....++++.+.+.+|+++.
T Consensus 160 ~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp CHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred cceeeeecccCcccEEECCCCCEEEEEE
Confidence 1224789998888888764
No 248
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.40 E-value=0.7 Score=43.98 Aligned_cols=239 Identities=7% Similarity=-0.027 Sum_probs=134.4
Q ss_pred ceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEE
Q psy14258 174 PRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKT 253 (440)
Q Consensus 174 P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~ 253 (440)
.+++++.|...+|...... +.|...+++.......+...-.....+++.+.+..|+.+. ..+.|..-++.......
T Consensus 126 v~~v~~s~dg~~l~s~~~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED---RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-GDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEcCC---CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec-CCCcEEEEECCCCeeEE
Confidence 5789999854455544433 5788888875543333333344567899987777776554 55678777775543332
Q ss_pred EecCCccCceeeeeEec--CEEEEEecCCCeEEEEeccCCCceEEEecC--------CCCeEEEEeccCCCCCCCCCcee
Q psy14258 254 IRKGFPVQNLYDITVFE--NNLFVTSWRNQSIIRVNKFNSDDYETIANF--------SRPFAIHIYHRQKQPDALKPSTF 323 (440)
Q Consensus 254 i~~~~~~~~p~gl~~~~--~~ly~td~~~~~i~~~~~~~g~~~~~~~~~--------~~p~~~~v~~~~~qp~~~~~~~~ 323 (440)
.... -.....+++.. +.++.+-...+.|...+..+++....+... .....+.+. |++.
T Consensus 202 ~~~~--~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~----------~~g~ 269 (393)
T 1erj_A 202 TLSI--EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFT----------RDGQ 269 (393)
T ss_dssp EEEC--SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEEC----------TTSS
T ss_pred EEEc--CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEEC----------CCCC
Confidence 2221 23455666653 355555556777877787666554433110 112233332 3433
Q ss_pred EEeecCCccEEEEEEcCCCCCC--------ceeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE
Q psy14258 324 LLYAKGKPAIIKGLTFKRDGTT--------EQAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI 394 (440)
Q Consensus 324 l~~~~~~~~~I~~i~~~~~~~~--------~~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~ 394 (440)
++++-+..+.|+..++...... ......+. .-.....+++.+.+..|. +-...+.|+.-++........+
T Consensus 270 ~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~l 348 (393)
T 1erj_A 270 SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKSGNPLLML 348 (393)
T ss_dssp EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCCCeEEEEE
Confidence 4444444578888877543110 01111121 222456888988777554 4456788888887654444444
Q ss_pred ECCCCCeeeEEEecC-----CCcEEEEeCCCCeEEEEEeC
Q psy14258 395 DTGIYNVEGMAVDWM-----ANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 395 ~~~~~~~~glAvD~~-----~~~lYwtd~~~~~I~~~~~~ 429 (440)
...-..+..+++... .+++..+-...++|.+-++.
T Consensus 349 ~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 349 QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 444456777777532 35677777777888887765
No 249
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.37 E-value=0.67 Score=43.43 Aligned_cols=271 Identities=10% Similarity=0.035 Sum_probs=149.1
Q ss_pred cccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC--
Q psy14258 134 LDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-- 207 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~-- 207 (440)
..... ++.+.++.|+-+ +.|.+-+.........+.........+++.|. |.++.+-... +.|...++....
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~-g~~lasg~~d--~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS-GCAIACGGLD--NKCSVYPLTFDKNE 141 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT-SSEEEEESTT--SEEEEEECCCCTTC
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC-CCEEEEeeCC--CCEEEEEEeccccc
Confidence 34455 555555433333 67777776554444333444456789999994 5555554333 466666654221
Q ss_pred ----ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec---CEEEEEecCC
Q psy14258 208 ----RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE---NNLFVTSWRN 280 (440)
Q Consensus 208 ----~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~---~~ly~td~~~ 280 (440)
....+...-.....+++.+.+..|+-+. ..+.|..-++..........+. ......+++.. +.++++-...
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s-~D~~v~lwd~~~~~~~~~~~~h-~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTAS-GDGTCALWDVESGQLLQSFHGH-GADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTCCEEEEEECC-SSCEEEEEECCCSSCCEEEEEETT
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEe-CCCcEEEEeCCCCeEEEEEcCC-CCCeEEEEEEeCCCCCEEEEEeCC
Confidence 1111111223456788876666666554 5667877777544333222221 22344555532 3555665667
Q ss_pred CeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec--C-CC
Q psy14258 281 QSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT--D-LK 356 (440)
Q Consensus 281 ~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~--~-~~ 356 (440)
+.|...+..+++....+..-. ....+.+. |++.++++-+..+.|+..++... ....... . ..
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~~~v~~v~~~----------p~~~~l~s~s~D~~v~lwd~~~~----~~~~~~~~~~~~~ 285 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHESDVNSVRYY----------PSGDAFASGSDDATCRLYDLRAD----REVAIYSKESIIF 285 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTSCEEEEETTTT----EEEEEECCTTCCS
T ss_pred CeEEEEECCCCcEEEEecCCCCCeEEEEEe----------CCCCEEEEEeCCCeEEEEECCCC----cEEEEEcCCCccc
Confidence 888888887776655554322 23344433 33334444444578888887654 1111111 1 12
Q ss_pred CceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEE
Q psy14258 357 RPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINV 425 (440)
Q Consensus 357 ~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~ 425 (440)
....++|.+.+..++.. ...+.|+..++........+...-+.+..|++.+.+..|.-.. ..++|.+
T Consensus 286 ~~~~~~~s~~g~~l~~g-~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs-~D~~v~v 352 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAG-YNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS-WDHTLRV 352 (354)
T ss_dssp CEEEEEECTTSSEEEEE-ETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE-TTSEEEE
T ss_pred ceeEEEEeCCCCEEEEE-ECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc-CCCCEEe
Confidence 45689999987765544 4678888888754333333333456788999988766554443 3455544
No 250
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.36 E-value=0.6 Score=42.75 Aligned_cols=275 Identities=9% Similarity=-0.005 Sum_probs=149.5
Q ss_pred cccce-eeeecCCcEEEe----ceEEEEecCCce-----EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC
Q psy14258 134 LDGTE-RFPMVTHKIVYP----EAIYFCTHYMEH-----CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~----~~I~~~~~dg~~-----~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~ 203 (440)
..+.+ |+.+.++++.++ +.|.+-++.... ....+.........+++.|...+|+..... +.|...+.
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d---~~i~~~~~ 115 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWD---GTLRLWDL 115 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETT---SEEEEEET
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccc---ccceEEee
Confidence 34556 776666667776 567776665422 122223334678899999965555554443 57777777
Q ss_pred CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec---CEEEEEecCC
Q psy14258 204 DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE---NNLFVTSWRN 280 (440)
Q Consensus 204 dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~---~~ly~td~~~ 280 (440)
..................+...+.+..|+.+. ..+.+...+..+.................+++.. +.++.+-...
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 116 TTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS-RDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred cccceeeeecCCCCceeEEEEeecCccceeec-CCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC
Confidence 66554444443444455666665555555443 4456666665554443333211122233444432 2455555556
Q ss_pred CeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCce
Q psy14258 281 QSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPS 359 (440)
Q Consensus 281 ~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~ 359 (440)
+.|...+..+++....+..-. ....+.+. |++.++++-+..+.|+..++... .....+..-....
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s----------~~~~~l~s~s~Dg~i~iwd~~~~----~~~~~~~~~~~v~ 260 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYLNTVTVS----------PDGSLCASGGKDGQAMLWDLNEG----KHLYTLDGGDIIN 260 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTCEEEEEETTTT----EEEEEEECSSCEE
T ss_pred CEEEEEECCCCceeeEecCCCCcEEEEEEC----------CCCCEEEEEeCCCeEEEEEeccC----ceeeeecCCceEE
Confidence 777777766665544443322 23344332 34334444444578888887655 2333333334556
Q ss_pred EEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE---------ECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 360 VIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI---------DTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 360 ~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~---------~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
.+.+.+.+..+ +-...+.|+..++++....... ...-..+..|++.+.++.|+ +-...+.|.+-++.
T Consensus 261 ~~~~~~~~~~~--~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 261 ALCFSPNRYWL--CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF-AGYTDNLVRVWQVT 336 (340)
T ss_dssp EEEECSSSSEE--EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE-EEETTSCEEEEEEE
T ss_pred eeecCCCCcee--eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE-EEeCCCEEEEEeCC
Confidence 77787754433 3334677777777653211111 12234578899987666554 43446788888865
No 251
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.35 E-value=1.2 Score=46.03 Aligned_cols=275 Identities=12% Similarity=0.048 Sum_probs=149.1
Q ss_pred cccce-eeeecCCcEEEe----ceEEEEecCCc-----eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC
Q psy14258 134 LDGTE-RFPMVTHKIVYP----EAIYFCTHYME-----HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 134 ~~p~~-avD~~~~~lY~~----~~I~~~~~dg~-----~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~ 203 (440)
....+ ++.+.+.+++++ +.|.+-++... .....+.........+++.|...+|.-.... +.|...++
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~D---g~v~vwd~ 459 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWD---GELRLWDL 459 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETT---SEEEEEET
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCC---CcEEEEEC
Confidence 33445 555556667777 67777776532 1122233344668899999955555544443 58888888
Q ss_pred CCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCC--ccCceeeeeEecC---EEEEEec
Q psy14258 204 DGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGF--PVQNLYDITVFEN---NLFVTSW 278 (440)
Q Consensus 204 dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~--~~~~p~gl~~~~~---~ly~td~ 278 (440)
........+...-.....+++.+.+..|.-+. ..+.|..-+..+.....+.... .......+++..+ .+..+-.
T Consensus 460 ~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 460 AAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS-RDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp TTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-TTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred CCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe-CCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 65433333333334567888987776666554 4567777776655444443311 1122355665543 3455555
Q ss_pred CCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCC
Q psy14258 279 RNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKR 357 (440)
Q Consensus 279 ~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~ 357 (440)
..+.|...+..+++....+..-. ....+.+. |++.++++-+..+.|+..++... .....+..-..
T Consensus 539 ~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~s----------pdg~~l~sg~~Dg~i~iwd~~~~----~~~~~~~~~~~ 604 (694)
T 3dm0_A 539 WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVS----------PDGSLCASGGKDGVVLLWDLAEG----KKLYSLEANSV 604 (694)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTSBCEEEETTTT----EEEECCBCSSC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEe----------CCCCEEEEEeCCCeEEEEECCCC----ceEEEecCCCc
Confidence 67777777776655544443322 23344433 34444555444578888887654 22222223334
Q ss_pred ceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE-------------------CCCCCeeeEEEecCCCcEEEEeC
Q psy14258 358 PSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID-------------------TGIYNVEGMAVDWMANNLYWTDA 418 (440)
Q Consensus 358 p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~-------------------~~~~~~~glAvD~~~~~lYwtd~ 418 (440)
..+++|.+.+..+..+. .+.|...++........+. .....+..|++.+.++.|+- -.
T Consensus 605 v~~~~~sp~~~~l~~~~--~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~s-gs 681 (694)
T 3dm0_A 605 IHALCFSPNRYWLCAAT--EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFS-GY 681 (694)
T ss_dssp EEEEEECSSSSEEEEEE--TTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEE-EE
T ss_pred EEEEEEcCCCcEEEEEc--CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEE-Ec
Confidence 56888888765444332 4456666665432111111 01112467788776665554 44
Q ss_pred CCCeEEEEEeC
Q psy14258 419 GIGTINVAKIS 429 (440)
Q Consensus 419 ~~~~I~~~~~~ 429 (440)
..++|.+-++.
T Consensus 682 ~Dg~i~iW~i~ 692 (694)
T 3dm0_A 682 TDGVIRVWGIG 692 (694)
T ss_dssp TTSEEEEEEC-
T ss_pred CCCeEEEEecc
Confidence 46778877664
No 252
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.26 E-value=0.92 Score=43.90 Aligned_cols=254 Identities=5% Similarity=-0.034 Sum_probs=142.2
Q ss_pred ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeC-CCC
Q psy14258 151 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDF-PTK 229 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~-~~~ 229 (440)
+.|.+.++........+.........++..+ .+.|.-.... +.|...+++.......+.........+++.+ .++
T Consensus 142 g~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~-~~~l~s~s~d---g~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~ 217 (464)
T 3v7d_B 142 KMIRVYDSINKKFLLQLSGHDGGVWALKYAH-GGILVSGSTD---RTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI 217 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECS-TTEEEEEETT---SCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC
T ss_pred CcEEEEECCCCcEEEEEeCCCcCEEEEEEcC-CCEEEEEeCC---CCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC
Confidence 6788888776655544444556788999987 4555554443 5788888865443333332334456677764 233
Q ss_pred EEEEEeCCCCcEEEEEccCCCcE-----------------------EEecCCccCceeeeeEecCEEEEEecCCCeEEEE
Q psy14258 230 HVYWVDTYLDFIDRINYDGTDRK-----------------------TIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRV 286 (440)
Q Consensus 230 ~ly~~d~~~~~i~~~~~dG~~~~-----------------------~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~ 286 (440)
.++++-...+.|...++...... ....+ .......+...++.++... .++.|...
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~-~d~~i~vw 295 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG-HMASVRTVSGHGNIVVSGS-YDNTLIVW 295 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC-CSSCEEEEEEETTEEEEEE-TTSCEEEE
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC-ccceEEEEcCCCCEEEEEe-CCCeEEEE
Confidence 44444455667777776543211 11111 1223344555555665554 46778777
Q ss_pred eccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEE
Q psy14258 287 NKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYH 364 (440)
Q Consensus 287 ~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d 364 (440)
+..+++....+..-. ....+.+. |++..+++-+..+.|+..++... .....+.+ -.....++++
T Consensus 296 d~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~l~sg~~dg~i~vwd~~~~----~~~~~~~~h~~~v~~~~~~ 361 (464)
T 3v7d_B 296 DVAQMKCLYILSGHTDRIYSTIYD----------HERKRCISASMDTTIRIWDLENG----ELMYTLQGHTALVGLLRLS 361 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEE----------TTTTEEEEEETTSCEEEEETTTT----EEEEEECCCSSCEEEEEEC
T ss_pred ECCCCcEEEEecCCCCCEEEEEEc----------CCCCEEEEEeCCCcEEEEECCCC----cEEEEEeCCCCcEEEEEEc
Confidence 876665555443322 33444443 23223333334478888887654 22223322 2244577776
Q ss_pred cCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 365 EKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 365 ~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
++.+ ++-...++|...++.......... .-.....+++...+..|.... .+.|.+.++..
T Consensus 362 --~~~l-~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~ 421 (464)
T 3v7d_B 362 --DKFL-VSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS--ENQFNIYNLRS 421 (464)
T ss_dssp --SSEE-EEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE--TTEEEEEETTT
T ss_pred --CCEE-EEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec--CCeEEEEECCC
Confidence 4544 454568889988888654433333 334456677776565444443 57899998765
No 253
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.26 E-value=0.00086 Score=55.36 Aligned_cols=44 Identities=32% Similarity=0.671 Sum_probs=36.6
Q ss_pred ceecCCCCceeecccCCC-CCCCCC-CcccCCCceEEc-cCCeeeec
Q psy14258 2 TFRGPNKTQCVDADECLI-DGSCDQ-TCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~-~~~Cs~-~C~n~~~~~~C~-~~g~~l~~ 45 (440)
||.+.+++.|+|++||.. ++.|.+ .|.|++++|+|. +.||.+..
T Consensus 95 Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 95 GYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp TEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCT
T ss_pred ccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCC
Confidence 455446789999999984 578986 899999999999 99998753
No 254
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.22 E-value=1.3 Score=45.11 Aligned_cols=346 Identities=8% Similarity=-0.042 Sum_probs=175.2
Q ss_pred eEEEEeecccceeeeEEEecCCCceeeeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccc
Q psy14258 48 THLYETIEAFWEECFGPMDIEEWDEGLSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRP 127 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~~~~~~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v 127 (440)
.|+++..+. |...++........+..+...+.+++|++.++.|--.. ..+.|+..++........ .
T Consensus 32 ~l~~~~~~~-----v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~-~d~~v~lWd~~~~~~~~~--------~ 97 (611)
T 1nr0_A 32 KIQYCNGTS-----VYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD-VHGNVRIWDTTQTTHILK--------T 97 (611)
T ss_dssp EEEEEETTE-----EEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEE-TTSEEEEEESSSTTCCEE--------E
T ss_pred EEEeCCCCE-----EEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEe-CCCCEEEeECCCCcceee--------E
Confidence 455666666 77777754333322222222389999999866554444 446665555432111000 0
Q ss_pred eeeccccccce-eeeecCCcEEEe--c-----eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEE
Q psy14258 128 MLERSLLDGTE-RFPMVTHKIVYP--E-----AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLE 199 (440)
Q Consensus 128 ~~~~~~~~p~~-avD~~~~~lY~~--~-----~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~ 199 (440)
.+...-..... |+++.++.|..+ + .|...+. |..... +.........+++.|....++.+-... ..|.
T Consensus 98 ~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~-l~gh~~~v~~v~f~p~~~~~l~s~s~D--~~v~ 173 (611)
T 1nr0_A 98 TIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDT-GTSNGN-LTGQARAMNSVDFKPSRPFRIISGSDD--NTVA 173 (611)
T ss_dssp EEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTT-CCBCBC-CCCCSSCEEEEEECSSSSCEEEEEETT--SCEE
T ss_pred eecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeC-CCCcce-ecCCCCCceEEEECCCCCeEEEEEeCC--CeEE
Confidence 11122234566 888777765544 1 2333331 222111 222345678999999655445544333 4666
Q ss_pred EEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEecC-----CccCceeeeeEecC-E
Q psy14258 200 RSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRKG-----FPVQNLYDITVFEN-N 272 (440)
Q Consensus 200 r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~~-----~~~~~p~gl~~~~~-~ 272 (440)
..+.........+...-.....+++.+.+..|.-+ ...+.|..-+.. |.....+... .......++++..+ .
T Consensus 174 lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~-s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~ 252 (611)
T 1nr0_A 174 IFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST-GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 252 (611)
T ss_dssp EEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSS
T ss_pred EEECCCCeEeeeeccccCceEEEEECCCCCEEEEE-ECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCC
Confidence 66654322222222223457789998766555444 456778877754 4333333111 11234577888754 4
Q ss_pred EEEEecCCCeEEEEeccCCCceEEEecCCCC--eEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeee
Q psy14258 273 LFVTSWRNQSIIRVNKFNSDDYETIANFSRP--FAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIM 350 (440)
Q Consensus 273 ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p--~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~ 350 (440)
...+-...+.|...+..+++....+...... ..+.+... ...|+.. +..+.|+..++... ....
T Consensus 253 ~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~l~s~-s~d~~i~~~~~~~~----~~~~ 318 (611)
T 1nr0_A 253 KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWT---------KQALVSI-SANGFINFVNPELG----SIDQ 318 (611)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEEC---------SSCEEEE-ETTCCEEEEETTTT----EEEE
T ss_pred EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEc---------CCEEEEE-eCCCcEEEEeCCCC----Ccce
Confidence 5556556778887787666655443321110 11111110 1122222 22366666665443 2222
Q ss_pred eecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE-ECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEe
Q psy14258 351 PITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI-DTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKI 428 (440)
Q Consensus 351 ~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~-~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~ 428 (440)
.+.+ .....+++|.+.++.|+-+. ..++|+.-++.......+. ...-..+.++++.. .+.|+-+ ...++|.+.++
T Consensus 319 ~~~gh~~~v~~l~~spdg~~l~s~s-~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~-~~~l~s~-s~d~~v~~w~~ 395 (611)
T 1nr0_A 319 VRYGHNKAITALSSSADGKTLFSAD-AEGHINSWDISTGISNRVFPDVHATMITGIKTTS-KGDLFTV-SWDDHLKVVPA 395 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTCCEEECSSCSCSSCEEEEEECT-TSCEEEE-ETTTEEEEECS
T ss_pred EEcCCCCCEEEEEEeCCCCEEEEEe-CCCcEEEEECCCCceeeecccCCcceEEEEEECC-CCcEEEE-EcCCceEEeec
Confidence 2222 23566899999888776554 6778888887754332221 12234566777763 3444433 33445555554
Q ss_pred C
Q psy14258 429 S 429 (440)
Q Consensus 429 ~ 429 (440)
.
T Consensus 396 ~ 396 (611)
T 1nr0_A 396 G 396 (611)
T ss_dssp S
T ss_pred C
Confidence 3
No 255
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=96.18 E-value=0.0016 Score=44.33 Aligned_cols=27 Identities=26% Similarity=0.623 Sum_probs=24.0
Q ss_pred CCCCCCCCcccCC-CceEEc-cCCeeeec
Q psy14258 19 IDGSCDQTCTNTH-LSYTYT-DEGFSFQG 45 (440)
Q Consensus 19 ~~~~Cs~~C~n~~-~~~~C~-~~g~~l~~ 45 (440)
.++.|+|.|.|++ ++|.|. ++||.|.+
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~ 33 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAE 33 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECT
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECC
Confidence 3678999999999 699999 99999865
No 256
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.17 E-value=0.97 Score=43.29 Aligned_cols=121 Identities=8% Similarity=0.021 Sum_probs=68.2
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC-CCCceeEE-------ecCccCceEEEEeCCCCEEEEEeCCCCcE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTERFPMV-------THKIVYPYGVTVDFPTKHVYWVDTYLDFI 241 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d-G~~~~~l~-------~~~~~~P~gl~vD~~~~~ly~~d~~~~~i 241 (440)
......++++.| .|.++.+- . + +.|...+++ +.....++ ...-.....+++++.+..++.+-...+.|
T Consensus 176 h~~~v~~~~~~~-~~~~l~s~-~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 176 HTYHINSISINS-DYETYLSA-D-D-LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSSCCCEEEECT-TSSEEEEE-C-S-SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred CCcceEEEEEcC-CCCEEEEe-C-C-CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 345678999999 46666664 3 3 688888887 32222221 11123467899987763444444456788
Q ss_pred EEEEccCCCc-----EEEecCCc----------cCceeeeeEecC-EEEEEecCCCeEEEEeccC-CCceE
Q psy14258 242 DRINYDGTDR-----KTIRKGFP----------VQNLYDITVFEN-NLFVTSWRNQSIIRVNKFN-SDDYE 295 (440)
Q Consensus 242 ~~~~~dG~~~-----~~i~~~~~----------~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~-g~~~~ 295 (440)
...++..... ..+..... ......+++..+ .+..+-.. +.|...+..+ ++...
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~ 321 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVE 321 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSC
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccc
Confidence 8888765443 33322210 014567777654 33333333 7777777665 44433
No 257
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.73 Score=48.32 Aligned_cols=254 Identities=8% Similarity=-0.046 Sum_probs=136.2
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE--ecCccCceEEEEeCC--CCEEEEEeCCCCcEEEEE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV--THKIVYPYGVTVDFP--TKHVYWVDTYLDFIDRIN 245 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~--~~~~~~P~gl~vD~~--~~~ly~~d~~~~~i~~~~ 245 (440)
......+++++|...+|+.+... +.|...++++.....+. ...-.....+++.+. +..|+.+ ...+.|...+
T Consensus 8 H~~~V~~l~~s~dg~~latg~~d---g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~-s~Dg~I~vwd 83 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASC-SYDGKVLIWK 83 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEETT---TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEE-ETTSCEEEEE
T ss_pred CcceeEEEEECCCCCeEEEEECC---CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEE-eCCCeEEEEE
Confidence 34567788888865555555443 57777777643333222 122334567888655 4555544 4567788888
Q ss_pred ccCCCcEEEec-CCccCceeeeeEec---CEEEEEecCCCeEEEEeccCCCceE--EEecCC-CCeEEEEeccCC-CCCC
Q psy14258 246 YDGTDRKTIRK-GFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNSDDYE--TIANFS-RPFAIHIYHRQK-QPDA 317 (440)
Q Consensus 246 ~dG~~~~~i~~-~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g~~~~--~~~~~~-~p~~~~v~~~~~-qp~~ 317 (440)
+++.....+.. .........+++.. +.++.+-..++.|...+..++.... .+.... ....+.. +|.. .+..
T Consensus 84 ~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~-~p~~~~~~~ 162 (753)
T 3jro_A 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW-APATIEEDG 162 (753)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEE-CCCC-----
T ss_pred CCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEe-cCccccccc
Confidence 77654322222 11133456777653 3444454567788777776653322 222222 2233333 2211 0000
Q ss_pred C---CCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCC--CEEEEEECCCCeEEEEecCCCCeE
Q psy14258 318 L---KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKE--EYIYYAELTSYVIERRKMFGRGKE 391 (440)
Q Consensus 318 ~---~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~--~~vy~~d~~~~~I~r~~~~g~~~~ 391 (440)
. .+++.++++-+..+.|+..++............+.+ -....++++.+.+ +.+.++-...+.|...++......
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~ 242 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGP 242 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSC
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCc
Confidence 0 113333444344578888887655111112222222 2346689999984 556666667888888888753211
Q ss_pred ---EEEE--CCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 392 ---VVID--TGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 392 ---~~~~--~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
.+.. ..-..+..+++.+.++.|... ...+.|.+.+++
T Consensus 243 ~~~~~~~~~~~~~~v~~l~~spdg~~l~s~-s~Dg~I~vwd~~ 284 (753)
T 3jro_A 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKEN 284 (753)
T ss_dssp CBCCBSSSSCCSSCCCCEEECTTTCCEEEE-CSSSCEECCBCC
T ss_pred ceeEEeccCCCCCceEEEEEcCCCCEEEEE-cCCCEEEEEecC
Confidence 1111 123457789999866655444 456789988877
No 258
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.15 E-value=1.5 Score=45.38 Aligned_cols=277 Identities=9% Similarity=0.061 Sum_probs=148.1
Q ss_pred eeeecCCcEEEe--------ceEEEEecCCceEEEEEcC------CCCCceEEEEcCCCCeEEEEE-cCC-CCCcEEEEe
Q psy14258 139 RFPMVTHKIVYP--------EAIYFCTHYMEHCMIAIDL------NLSKPRGIALDPTSGYMFFTK-WGA-TRPMLERSL 202 (440)
Q Consensus 139 avD~~~~~lY~~--------~~I~~~~~dg~~~~~~~~~------~~~~P~~iavd~~~g~lywtd-~~~-~~~~I~r~~ 202 (440)
+.-..++.+|+. ..+.|...++.. ++++.. ......++++.|...+|-|+. .+. ....|...+
T Consensus 83 ~p~~~g~~~y~~~~~~~~~~~~~~r~~~~~~~-~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~d 161 (693)
T 3iuj_A 83 APFREGRYHYFFKNDGLQNQNVLWRQQEGKPA-EVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMD 161 (693)
T ss_dssp CCEEETTEEEEEEECSSCSSCEEEEECTTSCC-EEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEE
T ss_pred CCEEECCEEEEEEEcCCCceeEEEEeCCCCCc-EEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEE
Confidence 334557778877 245565565554 455542 112466889999766665553 322 124789999
Q ss_pred CCCCCceeEEecCccCceEEEEeCCCCEEEEEeCC------------CCcEEEEEccCCC--cEEEecCCc--cCceeee
Q psy14258 203 LDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTY------------LDFIDRINYDGTD--RKTIRKGFP--VQNLYDI 266 (440)
Q Consensus 203 ~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~------------~~~i~~~~~dG~~--~~~i~~~~~--~~~p~gl 266 (440)
+++............ -.+++.. .++.||++... ...|+..++.... ...+..... -..-.++
T Consensus 162 l~tg~~~~~~~~~~k-~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~ 239 (693)
T 3iuj_A 162 VESKQPLETPLKDVK-FSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGA 239 (693)
T ss_dssp TTTCSEEEEEEEEEE-SCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEE
T ss_pred CCCCCCCccccCCce-eccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEE
Confidence 987664433221111 1244555 57778777543 2357777764332 244544321 0112345
Q ss_pred eEec--CEEEEEecC---CCeEEEEeccCCC-ceEEE-ecCCCCeEEEEeccCCCCCCCCCceeEEeecCC--ccEEEEE
Q psy14258 267 TVFE--NNLFVTSWR---NQSIIRVNKFNSD-DYETI-ANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGK--PAIIKGL 337 (440)
Q Consensus 267 ~~~~--~~ly~td~~---~~~i~~~~~~~g~-~~~~~-~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~--~~~I~~i 337 (440)
++.. .+|+++... .+.|+.++..++. ....+ .....-... +.+ ..+.+++.++.. +.+|..+
T Consensus 240 ~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~--------~g~~l~~~t~~~~~~~~l~~~ 310 (693)
T 3iuj_A 240 TVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN--------KGSTLYLLTNRDAPNRRLVTV 310 (693)
T ss_dssp EECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE--------ETTEEEEEECTTCTTCEEEEE
T ss_pred EEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec--------cCCEEEEEECCCCCCCEEEEE
Confidence 5543 367665432 2477777765543 22322 222211111 221 112444555432 4789999
Q ss_pred EcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCC--CeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEE
Q psy14258 338 TFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTS--YVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYW 415 (440)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~--~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYw 415 (440)
++++. ........+..-... +++.+.+++|+++.... ..|+..+++|.....+...+.....+++.++.++.|++
T Consensus 311 d~~~~-~~~~~~~l~~~~~~~--~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~ 387 (693)
T 3iuj_A 311 DAANP-GPAHWRDLIPERQQV--LTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYF 387 (693)
T ss_dssp ETTSC-CGGGCEEEECCCSSC--EEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEE
T ss_pred eCCCC-CccccEEEecCCCCE--EEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEE
Confidence 98875 221111111221122 27777788998885443 47899999876544443334445566777777788887
Q ss_pred EeCC---CCeEEEEEeCC
Q psy14258 416 TDAG---IGTINVAKISD 430 (440)
Q Consensus 416 td~~---~~~I~~~~~~g 430 (440)
+-.. -.+|..+++.+
T Consensus 388 ~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 388 GFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp EEECSSSCCEEEEECTTT
T ss_pred EecCCCCCCEEEEEECCC
Confidence 7432 26788888765
No 259
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.14 E-value=0.2 Score=52.10 Aligned_cols=97 Identities=10% Similarity=-0.031 Sum_probs=65.9
Q ss_pred ceEEEEecCCceEEEEEcCCC---CCceEEEEcCCCCeEEEEEcCC-------CCCcEEEEeCCCCCc---eeEEecCcc
Q psy14258 151 EAIYFCTHYMEHCMIAIDLNL---SKPRGIALDPTSGYMFFTKWGA-------TRPMLERSLLDGTER---FPMVTHKIV 217 (440)
Q Consensus 151 ~~I~~~~~dg~~~~~~~~~~~---~~P~~iavd~~~g~lywtd~~~-------~~~~I~r~~~dG~~~---~~l~~~~~~ 217 (440)
+.|.+.+.++...+.+..... .....+++.|...+|.++.... . ..|...++++... ..+. .
T Consensus 36 ~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~-~~i~~~d~~~g~~~~~~~l~----~ 110 (719)
T 1z68_A 36 NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYT-ATYYIYDLSNGEFVRGNELP----R 110 (719)
T ss_dssp SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEE-EEEEEEETTTTEECCSSCCC----S
T ss_pred CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecc-eEEEEEECCCCccccceecC----c
Confidence 678899998877776654211 1367899999777777765411 1 4899999987654 3331 2
Q ss_pred CceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEE
Q psy14258 218 YPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTI 254 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i 254 (440)
....+++.|.+.+|.++. .+.|...++++.....+
T Consensus 111 ~~~~~~~SPDG~~la~~~--~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVY--QNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp SBCCEEECSSTTCEEEEE--TTEEEEESSTTSCCEEC
T ss_pred ccccceECCCCCEEEEEE--CCeEEEEeCCCCCcEEE
Confidence 356788888888888875 45788888866555444
No 260
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.12 E-value=0.95 Score=42.78 Aligned_cols=277 Identities=8% Similarity=-0.010 Sum_probs=150.3
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc--
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER-- 208 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~-- 208 (440)
.... ++.+.++.|.-+ +.|.+-+.........+.........+++.|. |.+..+-... ..|...++.....
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~-g~~las~~~d--~~v~iw~~~~~~~~~ 144 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN-GQSVACGGLD--SACSIFNLSSQADRD 144 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT-SSEEEECCSS--SCCEEEECCCCSSCC
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC-CCEEEEeeCC--CcEEEEECCCCcccc
Confidence 3444 555555544433 67888887765554444445566788999995 4444443222 4566666542110
Q ss_pred -----eeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEec-C---CccCceeeeeEe--cCEEEEEe
Q psy14258 209 -----FPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRK-G---FPVQNLYDITVF--ENNLFVTS 277 (440)
Q Consensus 209 -----~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~---~~~~~p~gl~~~--~~~ly~td 277 (440)
...+...-.....+.+.+..+..+.+-...+.|..-++.......... . ........+++. ++.++.+-
T Consensus 145 ~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sg 224 (380)
T 3iz6_a 145 GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISG 224 (380)
T ss_dssp CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEE
T ss_pred CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEE
Confidence 001111112233344444444434444566677777765444333321 1 012234556654 34666776
Q ss_pred cCCCeEEEEeccC-CCceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeec--
Q psy14258 278 WRNQSIIRVNKFN-SDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-- 353 (440)
Q Consensus 278 ~~~~~i~~~~~~~-g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-- 353 (440)
...+.|...+... ++....+.+-. ....+.+. |++.++++-+..+.|+..++... .......
T Consensus 225 s~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~----------p~~~~l~s~s~D~~i~lwd~~~~----~~~~~~~~~ 290 (380)
T 3iz6_a 225 SCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFF----------PDGQRFGTGSDDGTCRLFDMRTG----HQLQVYNRE 290 (380)
T ss_dssp ETTSCEEEEETTTTCCCCEEECCCSSCCCEEEEC----------TTSSEEEEECSSSCEEEEETTTT----EEEEEECCC
T ss_pred ECCCeEEEEECCCCCcceEEECCcCCCeEEEEEe----------cCCCeEEEEcCCCeEEEEECCCC----cEEEEeccc
Confidence 6678887777653 33333443222 34445443 34445555555578888887654 1111111
Q ss_pred ------CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEE----ECCCCCeeeEEEecCCCcEEEEeCCCCeE
Q psy14258 354 ------DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVI----DTGIYNVEGMAVDWMANNLYWTDAGIGTI 423 (440)
Q Consensus 354 ------~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~----~~~~~~~~glAvD~~~~~lYwtd~~~~~I 423 (440)
......+++|.+.+..+ ++-...+.|+..+.........+ ...-+.+..|++.+.+. +..+-...++|
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~~l-~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i 368 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGRLL-FAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNL 368 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSSEE-EEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCE
T ss_pred ccccccccCceEEEEECCCCCEE-EEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCE
Confidence 01124689999987755 45556888988887644332222 12334678899998665 45565667899
Q ss_pred EEEEeCC
Q psy14258 424 NVAKISD 430 (440)
Q Consensus 424 ~~~~~~g 430 (440)
.+-++.|
T Consensus 369 ~iW~~~~ 375 (380)
T 3iz6_a 369 KIWAFSG 375 (380)
T ss_dssp EEEECCS
T ss_pred EEEecCC
Confidence 9999987
No 261
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=95.99 E-value=0.0018 Score=43.00 Aligned_cols=29 Identities=28% Similarity=0.723 Sum_probs=24.8
Q ss_pred CC-CCCCCCCCcccCCC-ceEEc-cCCeeeec
Q psy14258 17 CL-IDGSCDQTCTNTHL-SYTYT-DEGFSFQG 45 (440)
Q Consensus 17 C~-~~~~Cs~~C~n~~~-~~~C~-~~g~~l~~ 45 (440)
|. .++.|+|.|.|+++ +|.|. ++||.|.+
T Consensus 2 C~~~nggC~~~C~n~~ggs~~C~C~~Gy~L~~ 33 (53)
T 2bz6_L 2 CVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA 33 (53)
T ss_dssp TTSGGGGCSSEEEEETTTEEEEECCTTEEECT
T ss_pred CcCCCCCcCCEeEcCCCCCEEeeCCCCCEECC
Confidence 44 35789999999998 79999 99999865
No 262
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=95.98 E-value=1.1 Score=42.14 Aligned_cols=277 Identities=8% Similarity=-0.013 Sum_probs=142.5
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecCCceEEEEEc-------------CCCCCceEEEEcCCCCeEEEEEcCCCCC
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHYMEHCMIAID-------------LNLSKPRGIALDPTSGYMFFTKWGATRP 196 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~-------------~~~~~P~~iavd~~~g~lywtd~~~~~~ 196 (440)
.... ++.+..+++.++ +.|.+.+++......... .......++++.|..+.++.+-... +
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d--~ 122 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD--K 122 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT--S
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC--C
Confidence 3444 555523334444 678888877543211111 1335688999998656555554333 5
Q ss_pred cEEEEeCCCCCceeEEecCccCceEEEEeCCCC--EEEEEeCCCCcEEEEEccCCC-cEEEecCCccCceeeeeEecC--
Q psy14258 197 MLERSLLDGTERFPMVTHKIVYPYGVTVDFPTK--HVYWVDTYLDFIDRINYDGTD-RKTIRKGFPVQNLYDITVFEN-- 271 (440)
Q Consensus 197 ~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~--~ly~~d~~~~~i~~~~~dG~~-~~~i~~~~~~~~p~gl~~~~~-- 271 (440)
.|...+++......... .......+++.+... .++.+-...+.|...++.... ...+... ......+++..+
T Consensus 123 ~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGH--RQEILAVSWSPRYD 199 (408)
T ss_dssp EEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCC--CSCEEEEEECSSCT
T ss_pred eEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCC--CCcEEEEEECCCCC
Confidence 88888887655443333 223455667665432 244444566788888876443 3333222 234567777654
Q ss_pred EEEEEecCCCeEEEEeccCCCce-EEEecCC----------------CCeEEEEeccCCCCCCCCCce-eEEeecCCccE
Q psy14258 272 NLFVTSWRNQSIIRVNKFNSDDY-ETIANFS----------------RPFAIHIYHRQKQPDALKPST-FLLYAKGKPAI 333 (440)
Q Consensus 272 ~ly~td~~~~~i~~~~~~~g~~~-~~~~~~~----------------~p~~~~v~~~~~qp~~~~~~~-~l~~~~~~~~~ 333 (440)
.++++-...+.|...+..++... ..+.... ....+.+. |++ +|+.+ +..+.
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----------~~~~~l~~~-~~dg~ 268 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT----------SDGLHLLTV-GTDNR 268 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC----------TTSSEEEEE-ETTSC
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc----------CCCCEEEEe-cCCCe
Confidence 46666666777877777655422 2221100 11122221 333 34433 33477
Q ss_pred EEEEEcCCCCCCcee---eeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCC
Q psy14258 334 IKGLTFKRDGTTEQA---IMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMA 410 (440)
Q Consensus 334 I~~i~~~~~~~~~~~---~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~ 410 (440)
|+..++......... ...............+.....+ ++ ...+.|...++........+...-..+..+++.+.+
T Consensus 269 i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 269 MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFV-FV-PYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEE-EE-EETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred EEEEECCCCccceeccccccccccccceeEEecCCCceEE-EE-ecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 888887654110000 0000000011112222222222 22 234667777765443333333344678899999866
Q ss_pred CcEEEEeCCCCeEEEEEeCC
Q psy14258 411 NNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 411 ~~lYwtd~~~~~I~~~~~~g 430 (440)
+.|+ +-...+.|.+.+++.
T Consensus 347 ~~l~-s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 347 QELY-SGSRDCNILAWVPSL 365 (408)
T ss_dssp TEEE-EEETTSCEEEEEECC
T ss_pred CEEE-EECCCCeEEEEeCCC
Confidence 5554 545567899999876
No 263
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=95.95 E-value=0.0033 Score=46.07 Aligned_cols=34 Identities=35% Similarity=0.632 Sum_probs=30.4
Q ss_pred ceeecccCCCCCCCCC-CcccCCCceEEc-cCCeee
Q psy14258 10 QCVDADECLIDGSCDQ-TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 10 ~C~d~~~C~~~~~Cs~-~C~n~~~~~~C~-~~g~~l 43 (440)
+|+|++||..+..|.+ .|.|++++|+|. ++||.+
T Consensus 1 sC~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~ 36 (82)
T 1emn_A 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36 (82)
T ss_dssp CCCCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE
T ss_pred CCCccccCCCCCCcCCCEEEecCCCEEEECCCCeEC
Confidence 5899999997678876 899999999999 999986
No 264
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=95.94 E-value=1.1 Score=41.94 Aligned_cols=269 Identities=5% Similarity=-0.093 Sum_probs=140.2
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|++.+++|. +-...+.|...+...... . -.+......... ++.+.+..|... +.|.+.+
T Consensus 66 ~V~~~~~s~d~~~l~-s~s~Dg~v~vWd~~~~~~--~--------~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIV-SSSQDGKVIVWDSFTTNK--E--------HAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECTTSSEEE-EEETTSEEEEEETTTCCE--E--------EEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred eEEEEEECCCCCEEE-EEeCCCeEEEEECCCCCc--c--------eEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 489999998765554 444446655444322111 0 011122334556 777766544433 5666666
Q ss_pred cCCc-------eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCC-CC
Q psy14258 158 HYME-------HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFP-TK 229 (440)
Q Consensus 158 ~dg~-------~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~-~~ 229 (440)
+... ....+ ........++++.|....|+-+... +.|...++........+...-.....+++.+. .+
T Consensus 135 ~~~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~t~s~D---~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g 210 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSV-AMHTNYLSACSFTNSDMQILTASGD---GTCALWDVESGQLLQSFHGHGADVLCLDLAPSETG 210 (354)
T ss_dssp CCCCTTCCSGGGCEEE-EECSSCEEEEEECSSSSEEEEEETT---SEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSC
T ss_pred Eeccccccccccceee-eccCCcEEEEEEeCCCCEEEEEeCC---CcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCC
Confidence 5421 11122 1233456788888865555555443 57888887644333233322334556777654 23
Q ss_pred EEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEEecCCC---CeE
Q psy14258 230 HVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSR---PFA 305 (440)
Q Consensus 230 ~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~---p~~ 305 (440)
.++++-...+.|...++..........+ .-....++++..+ .++.+-...+.|...+..+++...++..... ...
T Consensus 211 ~~l~sgs~Dg~v~~wd~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 211 NTFVSGGCDKKAMVWDMRSGQCVQAFET-HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecC-CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeE
Confidence 4444445667888888764443333332 1234567777643 4555555677787777766554444432221 122
Q ss_pred EEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEE
Q psy14258 306 IHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIE 381 (440)
Q Consensus 306 ~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~ 381 (440)
+.+. |++.++++-+..+.|+..++... .....+.+ -....+++|.+.+..|.-++ ..++|+
T Consensus 290 ~~~s----------~~g~~l~~g~~d~~i~vwd~~~~----~~~~~l~~h~~~v~~l~~spdg~~l~sgs-~D~~v~ 351 (354)
T 2pbi_B 290 VDFS----------LSGRLLFAGYNDYTINVWDVLKG----SRVSILFGHENRVSTLRVSPDGTAFCSGS-WDHTLR 351 (354)
T ss_dssp EEEC----------TTSSEEEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTSSCEEEEE-TTSEEE
T ss_pred EEEe----------CCCCEEEEEECCCcEEEEECCCC----ceEEEEECCCCcEEEEEECCCCCEEEEEc-CCCCEE
Confidence 2222 34334444344478888887443 12222222 23556899998777554333 455554
No 265
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.91 E-value=1.2 Score=41.98 Aligned_cols=252 Identities=7% Similarity=-0.050 Sum_probs=124.0
Q ss_pred cCCcEEEe---ceEEEEecC-CceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC-CCCCceeEEecC-c
Q psy14258 143 VTHKIVYP---EAIYFCTHY-MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL-DGTERFPMVTHK-I 216 (440)
Q Consensus 143 ~~~~lY~~---~~I~~~~~d-g~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~-dG~~~~~l~~~~-~ 216 (440)
.++.||+. +.+...+.+ |+..-..-... ......+++ .+.||+.... +.|...+. +|..+...-... .
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~-~~~~~p~~~--~~~v~v~~~~---g~l~~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG-EALSRPVVS--DGLVLIHTSN---GQLQALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS-CCCSCCEEE--TTEEEEECTT---SEEEEEETTTCCEEEEEECCC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC-ceEcCCEEE--CCEEEEEcCC---CeEEEEECCCCcEEEEEeCCCCc
Confidence 46778887 578888875 65432221111 111112332 4677776543 46777775 454332221110 0
Q ss_pred ---cCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEecCCc--------cC-ceeeeeEecCEEEEEecCCCeE
Q psy14258 217 ---VYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIRKGFP--------VQ-NLYDITVFENNLFVTSWRNQSI 283 (440)
Q Consensus 217 ---~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~~~~~--------~~-~p~gl~~~~~~ly~td~~~~~i 283 (440)
......+++ ++++|+.. ..+.+..++.. |..+........ +. ......+.++.+|+... .+.+
T Consensus 176 ~~~~~~~~~~~~--~~~v~~g~-~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~-~g~l 251 (376)
T 3q7m_A 176 LSLRGESAPTTA--FGAAVVGG-DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY-NGNL 251 (376)
T ss_dssp ---CCCCCCEEE--TTEEEECC-TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT-TSCE
T ss_pred eeecCCCCcEEE--CCEEEEEc-CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec-CcEE
Confidence 001223443 56777653 35678888864 443322221100 00 01223456789998864 6788
Q ss_pred EEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCC--CCceEE
Q psy14258 284 IRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDL--KRPSVI 361 (440)
Q Consensus 284 ~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~--~~p~~l 361 (440)
..++..+|+..-... ...+..+.+. ++.|+++.. .+.+..++.... ........+ ......
T Consensus 252 ~~~d~~tG~~~w~~~-~~~~~~~~~~-----------~~~l~~~~~-~g~l~~~d~~tG----~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 252 TALDLRSGQIMWKRE-LGSVNDFIVD-----------GNRIYLVDQ-NDRVMALTIDGG----VTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp EEEETTTCCEEEEEC-CCCEEEEEEE-----------TTEEEEEET-TCCEEEEETTTC----CEEEEECTTTTSCCCCC
T ss_pred EEEECCCCcEEeecc-CCCCCCceEE-----------CCEEEEEcC-CCeEEEEECCCC----cEEEeecccCCCcccCC
Confidence 999988776543221 2222233222 455666654 267877776544 111111111 111122
Q ss_pred EEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEEC-CCCCeeeEEEecCCCcEEEEeCCCCeEEEEE
Q psy14258 362 DYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDT-GIYNVEGMAVDWMANNLYWTDAGIGTINVAK 427 (440)
Q Consensus 362 ~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~-~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~ 427 (440)
.+. ++.||+.+ ..+.++.++.......--... +-......++. +++||+... .+.|..++
T Consensus 315 ~~~--~~~l~v~~-~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 315 VLY--NGNLVVGD-SEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAK-DGTVYSIT 375 (376)
T ss_dssp EEE--TTEEEEEC-TTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBT-TSCEEEEE
T ss_pred EEE--CCEEEEEe-CCCeEEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeC-CCEEEEEe
Confidence 222 57888886 367888888754322211222 11122334444 778998865 45676654
No 266
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.83 E-value=0.33 Score=45.51 Aligned_cols=234 Identities=9% Similarity=-0.000 Sum_probs=113.7
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCce--EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC-
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEH--CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE- 207 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~--~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~- 207 (440)
.... ++.+.++.|..+ +.|.+.++++.. ....+........++++.|...+|...... +.|...+++...
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d---~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD---RNAYVYEKRPDGT 89 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT---SSEEEC------C
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC---CeEEEEEcCCCCc
Confidence 3445 666655533333 567777776552 222222334567899999965555555544 477777776544
Q ss_pred --ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCC----cEEEecCCccCceeeeeEecC-EEEEEecCC
Q psy14258 208 --RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTD----RKTIRKGFPVQNLYDITVFEN-NLFVTSWRN 280 (440)
Q Consensus 208 --~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~----~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~ 280 (440)
........-.....+++.+.+..|+.+. ..+.|...+++... ...+... .......+++..+ .+..+-...
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPNEDKFAVGS-GARVISVCYFEQENDWWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTTSSCCEEEE-SSSCEEECCC-----CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESS
T ss_pred eeeeeEecccCCceEEEEECCCCCEEEEEe-cCCeEEEEEECCcccceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCC
Confidence 1112222234567888887777776665 45677777766543 3333321 1345677777654 444444456
Q ss_pred CeEEEEeccCCCc---------------eEEEecCC---CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCC
Q psy14258 281 QSIIRVNKFNSDD---------------YETIANFS---RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKR 341 (440)
Q Consensus 281 ~~i~~~~~~~g~~---------------~~~~~~~~---~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~ 341 (440)
+.|...+...++. ...+..+. ....+.+. |+ .+|+.+ +..+.|+..++..
T Consensus 168 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----------p~~~~l~~~-~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 168 RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFS----------PSGNALAYA-GHDSSVTIAYPSA 236 (377)
T ss_dssp SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEEC----------TTSSCEEEE-ETTTEEC-CEECS
T ss_pred CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEEC----------CCCCEEEEE-eCCCcEEEEECCC
Confidence 6666666532211 11111111 11222222 33 334443 3347888888766
Q ss_pred CCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 342 DGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 342 ~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
..........+.. ......++|.+.+..| .+- ..+.+.....+
T Consensus 237 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~-~~~~~~~~~~~ 280 (377)
T 3dwl_C 237 PEQPPRALITVKLSQLPLRSLLWANESAIV-AAG-YNYSPILLQGN 280 (377)
T ss_dssp TTSCEEECCCEECSSSCEEEEEEEETTEEE-EEE-SSSSEEEECCC
T ss_pred CCCcceeeEeecCCCCceEEEEEcCCCCEE-EEE-cCCcEEEEEeC
Confidence 5121110112222 2245689999876644 333 34445566655
No 267
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.83 E-value=0.39 Score=45.03 Aligned_cols=240 Identities=8% Similarity=-0.069 Sum_probs=117.7
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC--ceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE--RFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~--~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
....++++.|. |.++.+-... +.|...++++.. ....+...-.....+++.+.+..|+.+. ..+.|...++...
T Consensus 12 ~~v~~~~~s~~-g~~l~~~~~d--~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 12 KPSYEHAFNSQ-RTEFVTTTAT--NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-QDRNAYVYEKRPD 87 (377)
T ss_dssp SCCSCCEECSS-SSEEECCCSS--SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-TTSSEEEC-----
T ss_pred CcEEEEEECCC-CCEEEEecCC--CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-CCCeEEEEEcCCC
Confidence 45678899985 4444433222 456666665431 1111222234567889987776666665 4567777776554
Q ss_pred C---cEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCc---eEEEec-CC-CCeEEEEeccCCCCCCCCC
Q psy14258 250 D---RKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDD---YETIAN-FS-RPFAIHIYHRQKQPDALKP 320 (440)
Q Consensus 250 ~---~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~---~~~~~~-~~-~p~~~~v~~~~~qp~~~~~ 320 (440)
. ......+ .......+++..+ .++.+-...+.|...+..+++. ...+.. -. ....+.+. |
T Consensus 88 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~----------~ 156 (377)
T 3dwl_C 88 GTWKQTLVLLR-LNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWH----------P 156 (377)
T ss_dssp -CCCCEEECCC-CSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEEC----------T
T ss_pred CceeeeeEecc-cCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEc----------C
Confidence 3 2222221 1234566776543 3333333466776666655543 233332 12 23344333 2
Q ss_pred ceeEEeecCCccEEEEEEcCCCCC-------------C-ceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 321 STFLLYAKGKPAIIKGLTFKRDGT-------------T-EQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 321 ~~~l~~~~~~~~~I~~i~~~~~~~-------------~-~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
++.++++-+..+.|+..++..... . ......+..-....+++|++.+..|+.+. ..+.|+..++.
T Consensus 157 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~iwd~~ 235 (377)
T 3dwl_C 157 NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAG-HDSSVTIAYPS 235 (377)
T ss_dssp TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEE-TTTEEC-CEEC
T ss_pred CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEe-CCCcEEEEECC
Confidence 332333333347787777753210 0 11111222223466899999887665554 67788888887
Q ss_pred CCCe----EEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 387 GRGK----EVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 387 g~~~----~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
.... ...+......+..+++.+.++.| .+-. .+.+.+...+
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~-~~~~~~~~~~ 280 (377)
T 3dwl_C 236 APEQPPRALITVKLSQLPLRSLLWANESAIV-AAGY-NYSPILLQGN 280 (377)
T ss_dssp STTSCEEECCCEECSSSCEEEEEEEETTEEE-EEES-SSSEEEECCC
T ss_pred CCCCcceeeEeecCCCCceEEEEEcCCCCEE-EEEc-CCcEEEEEeC
Confidence 5443 12223344567889998766544 3333 3344466554
No 268
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.82 E-value=2.1 Score=44.70 Aligned_cols=236 Identities=5% Similarity=-0.126 Sum_probs=126.4
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceEE--EEEcCCCCCceEEEEcCC--CCeEEEEEcCCCCCcEEEEeCCCC
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCM--IAIDLNLSKPRGIALDPT--SGYMFFTKWGATRPMLERSLLDGT 206 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~--~~~~~~~~~P~~iavd~~--~g~lywtd~~~~~~~I~r~~~dG~ 206 (440)
.+.. ++.+.++.|+.+ +.|.+.++.+.... ..+........++++.|. ..+|+.+... +.|...++++.
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D---g~I~vwd~~~~ 87 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD---GKVLIWKEENG 87 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT---SCEEEEEEETT
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC---CeEEEEECCCC
Confidence 4455 666666655544 67888887643322 223334456789999875 3444444433 57887777765
Q ss_pred CceeE--EecCccCceEEEEeCC--CCEEEEEeCCCCcEEEEEccCCC--cEEEecCCccCceeeeeEec----------
Q psy14258 207 ERFPM--VTHKIVYPYGVTVDFP--TKHVYWVDTYLDFIDRINYDGTD--RKTIRKGFPVQNLYDITVFE---------- 270 (440)
Q Consensus 207 ~~~~l--~~~~~~~P~gl~vD~~--~~~ly~~d~~~~~i~~~~~dG~~--~~~i~~~~~~~~p~gl~~~~---------- 270 (440)
....+ ..........+++.+. +..|+.+ ...+.|...++.... ......+ .......+++..
T Consensus 88 ~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg-s~dg~I~vwdl~~~~~~~~~~~~~-~~~~v~~l~~~p~~~~~~~~~~ 165 (753)
T 3jro_A 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA-SSDGKVSVVEFKENGTTSPIIIDA-HAIGVNSASWAPATIEEDGEHN 165 (753)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTSEEEEEECCSSSCCCCEEEEC-CSSCEEEEEECCCC--------
T ss_pred cccccccccCCCCCeEEEEECCCCCCCEEEEE-eCCCcEEEEEeecCCCcceeEeec-CCCceEEEEecCcccccccccc
Confidence 32222 2222345678888876 5555555 456788888876542 1111221 123345555543
Q ss_pred ----CEEEEEecCCCeEEEEeccCCCceE-EEecC---C-CCeEEEEeccCCCCCCCCCc---eeEEeecCCccEEEEEE
Q psy14258 271 ----NNLFVTSWRNQSIIRVNKFNSDDYE-TIANF---S-RPFAIHIYHRQKQPDALKPS---TFLLYAKGKPAIIKGLT 338 (440)
Q Consensus 271 ----~~ly~td~~~~~i~~~~~~~g~~~~-~~~~~---~-~p~~~~v~~~~~qp~~~~~~---~~l~~~~~~~~~I~~i~ 338 (440)
+.++.+-..++.|...+..++.... ....+ . ....+.+. |+ +.++++-+..+.|+..+
T Consensus 166 ~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s----------p~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS----------PTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp -CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC----------CCCSSSEEEEEEESSSCEEEEE
T ss_pred cCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec----------cCCCCCCEEEEEecCCEEEEec
Confidence 3445555557777777766654432 22211 1 23334333 23 34444444457888888
Q ss_pred cCCCCCCce-eeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 339 FKRDGTTEQ-AIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 339 ~~~~~~~~~-~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
+........ ...... .-....++++++.+..++ +-...+.|+..+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~-s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLA-LSGGDNKVTLWKEN 284 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEE-EECSSSCEECCBCC
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEE-EEcCCCEEEEEecC
Confidence 766411100 111111 122456899999777554 44457778777766
No 269
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.71 E-value=1.3 Score=40.87 Aligned_cols=242 Identities=8% Similarity=-0.020 Sum_probs=128.0
Q ss_pred CCCCceEEEEcCCC--CeEEEEEcCCCCCcEEEEeCCC--CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEE
Q psy14258 170 NLSKPRGIALDPTS--GYMFFTKWGATRPMLERSLLDG--TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRIN 245 (440)
Q Consensus 170 ~~~~P~~iavd~~~--g~lywtd~~~~~~~I~r~~~dG--~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~ 245 (440)
.......|++.|.. |.++.+-... +.|...+++. ......+...-.....+++.+.+..|+.+. ..+.|...+
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-~dg~v~iwd 114 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSWA--NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-CDKTAKMWD 114 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEETT--SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-TTSEEEEEE
T ss_pred CCCceEEEEEcCCCCCceEEEEECCC--CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-CCCcEEEEE
Confidence 34567899999965 5555554333 5777777764 222123333345678899987777777654 567888888
Q ss_pred ccCCCcEEEecCCccCceeeeeE--ecC-EEEEEecCCCeEEEEeccCCCceEEEecCCCCeEEEEeccCCCCCCCCCce
Q psy14258 246 YDGTDRKTIRKGFPVQNLYDITV--FEN-NLFVTSWRNQSIIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDALKPST 322 (440)
Q Consensus 246 ~dG~~~~~i~~~~~~~~p~gl~~--~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~ 322 (440)
+.......+... -.....+++ ..+ .++++-..++.|...+..+++....+........+.... .
T Consensus 115 ~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-----------~ 181 (368)
T 3mmy_A 115 LSSNQAIQIAQH--DAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY-----------P 181 (368)
T ss_dssp TTTTEEEEEEEC--SSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEET-----------T
T ss_pred cCCCCceeeccc--cCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecC-----------C
Confidence 876554444332 334567777 444 556666667888888877776665554333333333221 1
Q ss_pred eEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCC---EEEEEECCCCeEEEEecCCCC---eEEEEEC
Q psy14258 323 FLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEE---YIYYAELTSYVIERRKMFGRG---KEVVIDT 396 (440)
Q Consensus 323 ~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~---~vy~~d~~~~~I~r~~~~g~~---~~~~~~~ 396 (440)
.++++.. .+.+...++... .................+++.+... ..+++-...+.|...+++... .......
T Consensus 182 ~~~~~~~-~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 182 MAVVATA-ERGLIVYQLENQ-PSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp EEEEEEG-GGCEEEEECSSS-CEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred eeEEEeC-CCcEEEEEeccc-cchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 2333322 255666666544 1100000000011122222222111 113333345556555555431 1111111
Q ss_pred CC------------CCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 397 GI------------YNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 397 ~~------------~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.- ..+..+++.+.++.|+... ..+.|.+.++..
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~ 304 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDA 304 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTT
T ss_pred eecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCC
Confidence 11 1478899998777665554 467899999875
No 270
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.63 E-value=1.4 Score=40.84 Aligned_cols=240 Identities=10% Similarity=-0.002 Sum_probs=136.4
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCC
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~ 249 (440)
......++++.|...+|.-.... +.|...++........+...-.....+++.+.+..|..+. ..+.|...++...
T Consensus 54 H~~~v~~~~~s~d~~~l~s~s~D---g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~d~~v~iw~~~~~ 129 (340)
T 1got_B 54 HLAKIYAMHWGTDSRLLLSASQD---GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-LDNICSIYNLKTR 129 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETT---TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-TTCEEEEEETTTC
T ss_pred CCCceEEEEECCCCCEEEEEeCC---CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-CCCeEEEEECccC
Confidence 44567889998854444443333 5788777765444333333344567888987776666554 4567777776543
Q ss_pred C--cEEE--ecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCCCCCCCceeE
Q psy14258 250 D--RKTI--RKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQPDALKPSTFL 324 (440)
Q Consensus 250 ~--~~~i--~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l 324 (440)
. .... ..+ .......+.+..+..+.+-...+.|...+..+++....+..-. ....+.+. |++.+
T Consensus 130 ~~~~~~~~~~~~-h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~----------~~~~~ 198 (340)
T 1got_B 130 EGNVRVSRELAG-HTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLA----------PDTRL 198 (340)
T ss_dssp SBSCEEEEEEEC-CSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC----------TTSSE
T ss_pred CCcceeEEEecC-CCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEEC----------CCCCE
Confidence 2 1211 111 1223445555544334455557778777876665554443222 23344333 34345
Q ss_pred EeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE-C-CCCCe
Q psy14258 325 LYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID-T-GIYNV 401 (440)
Q Consensus 325 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~-~-~~~~~ 401 (440)
+++-+..+.|+..++... .....+.+ -....+++|.|.++.+. +-...++|...++.......... . ....+
T Consensus 199 l~sg~~d~~v~~wd~~~~----~~~~~~~~h~~~v~~v~~~p~~~~l~-s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v 273 (340)
T 1got_B 199 FVSGACDASAKLWDVREG----MCRQTFTGHESDINAICFFPNGNAFA-TGSDDATCRLFDLRADQELMTYSHDNIICGI 273 (340)
T ss_dssp EEEEETTSCEEEEETTTC----SEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTEEEEEECCTTCCSCE
T ss_pred EEEEeCCCcEEEEECCCC----eeEEEEcCCcCCEEEEEEcCCCCEEE-EEcCCCcEEEEECCCCcEEEEEccCCcccce
Confidence 555444578888887654 22222222 23467899999877554 44567889888887543222222 1 12357
Q ss_pred eeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 402 EGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 402 ~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
..+++.+.++ +..+-...+.|.+.++..
T Consensus 274 ~~~~~s~~g~-~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 274 TSVSFSKSGR-LLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEETTT
T ss_pred EEEEECCCCC-EEEEECCCCeEEEEEccc
Confidence 8889987665 444545567888888654
No 271
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=95.58 E-value=1.5 Score=40.70 Aligned_cols=282 Identities=9% Similarity=0.006 Sum_probs=140.6
Q ss_pred EEEEEe-----eecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceE
Q psy14258 83 AIYFCT-----HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAI 153 (440)
Q Consensus 83 ~~~i~~-----d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I 153 (440)
+.++++ .+..+.+..+-...+.|+..++........ ...+...+......... ++.+.+..|+-+ +.|
T Consensus 24 V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~---~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 24 VTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY---FGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp EEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB---SEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEE
T ss_pred hhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc---cccccchhccCCCceEEEEECCCCCEEEEEcCCCcE
Confidence 777777 443455666666667776666643221100 00011112222334455 666655544333 678
Q ss_pred EEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe--cCccCceEEEEeCCCC--
Q psy14258 154 YFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT--HKIVYPYGVTVDFPTK-- 229 (440)
Q Consensus 154 ~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~--~~~~~P~gl~vD~~~~-- 229 (440)
.+-++........+........++++.|...+|.-+... +.|...++.+........ ........+++.+...
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d---~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAE---REIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETT---SCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSC
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCC---CEEEEEeccCCceeeeecccCCCceeeeeeeccccccc
Confidence 888887544433333345678899999965555554433 578888877543222111 1122345566654431
Q ss_pred -------EEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCC-CceEEEecC
Q psy14258 230 -------HVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNS-DDYETIANF 300 (440)
Q Consensus 230 -------~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g-~~~~~~~~~ 300 (440)
.++.+-...+.|...+..+.....+... -.....+++..+ ....+-...+.|...+.... .....+...
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h--~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~ 255 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAH--ESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG 255 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECC--SSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS
T ss_pred cccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCc--cccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC
Confidence 3333434556677666444322222221 234567777654 44555556777777776332 222233222
Q ss_pred CCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeee----------cCCCCceEEEEEcCCCE
Q psy14258 301 SRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI----------TDLKRPSVIDYHEKEEY 369 (440)
Q Consensus 301 ~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~----------~~~~~p~~l~~d~~~~~ 369 (440)
.....+.+ + |+ .+|..+.. +.|+..++..........+.. ........++|++.+..
T Consensus 256 ~~v~~v~~-s---------p~~~~la~~~d--~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 323 (343)
T 2xzm_R 256 STINQIAF-N---------PKLQWVAVGTD--QGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK 323 (343)
T ss_dssp SCEEEEEE-C---------SSSCEEEEEES--SCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC
T ss_pred CcEEEEEE-C---------CCCCEEEEECC--CCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe
Confidence 22333433 2 23 33443333 567777765441111001110 01123458999998876
Q ss_pred EEEEECCCCeEEEEec
Q psy14258 370 IYYAELTSYVIERRKM 385 (440)
Q Consensus 370 vy~~d~~~~~I~r~~~ 385 (440)
|+... ..+.|+..++
T Consensus 324 l~sg~-~Dg~v~~w~~ 338 (343)
T 2xzm_R 324 LFAGF-TDGVIRTFSF 338 (343)
T ss_dssp EEEEE-TTSEEEEEEE
T ss_pred EEEec-CCceEEEEEE
Confidence 65543 5677766554
No 272
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.54 E-value=1.9 Score=41.68 Aligned_cols=257 Identities=10% Similarity=0.005 Sum_probs=139.5
Q ss_pred eeeecCCcEEEe----ceEEEEecCCceEEEEEcCCCCCceEEEEcCC-CCeEEEEEcCCCCCcEEEEeCCCCCceeE--
Q psy14258 139 RFPMVTHKIVYP----EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPT-SGYMFFTKWGATRPMLERSLLDGTERFPM-- 211 (440)
Q Consensus 139 avD~~~~~lY~~----~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~-~g~lywtd~~~~~~~I~r~~~dG~~~~~l-- 211 (440)
++.|..+.++++ +.|.+.+++...+...+.........+++.+. ++.++.+-... +.|...++........
T Consensus 167 ~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d--~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 167 ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD--NTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp EEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT--SCEEEEECCCCCCC----
T ss_pred EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC--CcEEEeeCCCCccccccc
Confidence 455544444445 68999998866655555545567788888752 34444444333 4777777764432211
Q ss_pred ---------------------EecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEec
Q psy14258 212 ---------------------VTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE 270 (440)
Q Consensus 212 ---------------------~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~ 270 (440)
..........+ .+.+..|+.+. ..+.|...++..........+ .......+++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~-~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~ 320 (464)
T 3v7d_B 245 EEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGS-YDNTLIVWDVAQMKCLYILSG-HTDRIYSTIYDH 320 (464)
T ss_dssp --CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEE-TTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET
T ss_pred ccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEe-CCCeEEEEECCCCcEEEEecC-CCCCEEEEEEcC
Confidence 11111122233 33455666554 456787777754333222222 133456777765
Q ss_pred C-EEEEEecCCCeEEEEeccCCCceEEEecCCC-CeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCcee
Q psy14258 271 N-NLFVTSWRNQSIIRVNKFNSDDYETIANFSR-PFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQA 348 (440)
Q Consensus 271 ~-~ly~td~~~~~i~~~~~~~g~~~~~~~~~~~-p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~ 348 (440)
+ ...++-..++.|...+..+++....+..-.. ...+... +.+|+.+ +..+.|+..++... ..
T Consensus 321 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-----------~~~l~s~-s~dg~v~vwd~~~~----~~ 384 (464)
T 3v7d_B 321 ERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS-----------DKFLVSA-AADGSIRGWDANDY----SR 384 (464)
T ss_dssp TTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC-----------SSEEEEE-ETTSEEEEEETTTC----CE
T ss_pred CCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc-----------CCEEEEE-eCCCcEEEEECCCC----ce
Confidence 4 4444555677888888877765555543222 2233322 1334443 33478888888665 22
Q ss_pred eeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEE-EEECCCCCeeeEEEecCCCcEEEEeCCCC
Q psy14258 349 IMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEV-VIDTGIYNVEGMAVDWMANNLYWTDAGIG 421 (440)
Q Consensus 349 ~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~-~~~~~~~~~~glAvD~~~~~lYwtd~~~~ 421 (440)
......-.....+++.+.+..+.... .+.|+..++....... .....-..+..++++ ++.|..+-...+
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~l~~~~--dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g 454 (464)
T 3v7d_B 385 KFSYHHTNLSAITTFYVSDNILVSGS--ENQFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVEKDG 454 (464)
T ss_dssp EEEEECTTCCCEEEEEECSSEEEEEE--TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEEETT
T ss_pred eeeecCCCCccEEEEEeCCCEEEEec--CCeEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEEeCC
Confidence 22222333445678888777665554 6888888887533211 112233456777776 777777644333
No 273
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.37 E-value=2 Score=40.99 Aligned_cols=157 Identities=8% Similarity=-0.040 Sum_probs=85.2
Q ss_pred cCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCCcEEEe-c-----CCccCceeeeeEecC--EEEEEecCCCeEEEEe
Q psy14258 217 VYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTDRKTIR-K-----GFPVQNLYDITVFEN--NLFVTSWRNQSIIRVN 287 (440)
Q Consensus 217 ~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~~~~i~-~-----~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~ 287 (440)
.....+++.+.+..|..+ ..+.|...++. +.....+. . ...-.....+++..+ .++.+-...+.|...+
T Consensus 178 ~~v~~~~~~~~~~~l~s~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 255 (447)
T 3dw8_B 178 YHINSISINSDYETYLSA--DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCD 255 (447)
T ss_dssp SCCCEEEECTTSSEEEEE--CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred cceEEEEEcCCCCEEEEe--CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEE
Confidence 346688898766666655 47788888876 22222211 0 001223567777654 4556655678888888
Q ss_pred ccCCCc----eEEEecCC-------------CCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceee
Q psy14258 288 KFNSDD----YETIANFS-------------RPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAI 349 (440)
Q Consensus 288 ~~~g~~----~~~~~~~~-------------~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~ 349 (440)
..+++. ...+..-. ....+.+. |+ .+|+.+ +. +.|+..++...+..-. .
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----------~~g~~l~~~-~~-~~v~iwd~~~~~~~~~-~ 322 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS----------HSGRYMMTR-DY-LSVKVWDLNMENRPVE-T 322 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC----------TTSSEEEEE-ES-SEEEEEETTCCSSCSC-C
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEEC----------CCCCEEEEe-eC-CeEEEEeCCCCccccc-e
Confidence 777664 34443222 12233332 34 344444 44 8898888865211110 1
Q ss_pred eeec-CCC-------------CceEEEEEcCCCEEEEEECCCCeEEEEecCCCC
Q psy14258 350 MPIT-DLK-------------RPSVIDYHEKEEYIYYAELTSYVIERRKMFGRG 389 (440)
Q Consensus 350 ~~~~-~~~-------------~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~ 389 (440)
.... .+. ....++|.+.+..| ++-...+.|+..++....
T Consensus 323 ~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 323 YQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTKR 375 (447)
T ss_dssp EESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTCC
T ss_pred eeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCCc
Confidence 1111 000 01238888887766 555567888888887643
No 274
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=94.64 E-value=0.014 Score=53.72 Aligned_cols=33 Identities=24% Similarity=0.578 Sum_probs=28.4
Q ss_pred ecccCCC--CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 13 DADECLI--DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 13 d~~~C~~--~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+.|||.. ++.|+|.|.|+.++|+|. ..||.|..
T Consensus 1 ~~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~ 36 (283)
T 3f1s_B 1 AKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGE 36 (283)
T ss_dssp --CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECT
T ss_pred CCCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCC
Confidence 4689985 589999999999999999 99999875
No 275
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=94.62 E-value=3.2 Score=39.53 Aligned_cols=260 Identities=11% Similarity=0.020 Sum_probs=137.6
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC---C--CceeEEecCccCceEEEEeCCCCEEE
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG---T--ERFPMVTHKIVYPYGVTVDFPTKHVY 232 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG---~--~~~~l~~~~~~~P~gl~vD~~~~~ly 232 (440)
.+|.....+.........+|++.|..|.++.+-... +.|...+++. . .+..+....-.....+++.+.+..|+
T Consensus 50 ~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d--g~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 50 LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ--GVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT--SEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEE
T ss_pred ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC--ceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEE
Confidence 344444444333446788999999445444544333 5777777654 1 11122212234577899987666666
Q ss_pred EEeCCCCcEEEEEc----cCCCcEEEecC--------C--ccCceeeeeEe--c-CEEEEEecCCCeEEEEeccCCCceE
Q psy14258 233 WVDTYLDFIDRINY----DGTDRKTIRKG--------F--PVQNLYDITVF--E-NNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 233 ~~d~~~~~i~~~~~----dG~~~~~i~~~--------~--~~~~p~gl~~~--~-~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
.+. ..+.|...++ .|......... . .-.....++.. . +.++++-...+.|...+..+++...
T Consensus 128 s~s-~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 206 (437)
T 3gre_A 128 VSS-KDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQ 206 (437)
T ss_dssp EEE-TTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEe-CCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeE
Confidence 554 4566666665 34322221110 0 01122333322 2 3555555567888888887776666
Q ss_pred EEec---CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeee--cCCCCceEEEEEcC---C
Q psy14258 296 TIAN---FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI--TDLKRPSVIDYHEK---E 367 (440)
Q Consensus 296 ~~~~---~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~--~~~~~p~~l~~d~~---~ 367 (440)
.+.. ......+.+. |++.++++-+..+.|+..++... .....+ ..-.....+++.+. +
T Consensus 207 ~~~~~~h~~~v~~~~~s----------~~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 207 IIENSPRHGAVSSICID----------EECCVLILGTTRGIIDIWDIRFN----VLIRSWSFGDHAPITHVEVCQFYGKN 272 (437)
T ss_dssp EEECCGGGCCEEEEEEC----------TTSCEEEEEETTSCEEEEETTTT----EEEEEEBCTTCEEEEEEEECTTTCTT
T ss_pred EEccCCCCCceEEEEEC----------CCCCEEEEEcCCCeEEEEEcCCc----cEEEEEecCCCCceEEEEeccccCCC
Confidence 5543 2234455443 33334444344477888887654 222111 22223346655542 3
Q ss_pred CEEEEEECCCCeEEEEecCCCCeEEEEEC--------------------------CCCCeeeEEEecCCCcEEEEeCCCC
Q psy14258 368 EYIYYAELTSYVIERRKMFGRGKEVVIDT--------------------------GIYNVEGMAVDWMANNLYWTDAGIG 421 (440)
Q Consensus 368 ~~vy~~d~~~~~I~r~~~~g~~~~~~~~~--------------------------~~~~~~glAvD~~~~~lYwtd~~~~ 421 (440)
+.+.++-...+.|+..++........+.. ....+..|+++ .+++..+-...+
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~ 350 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATS 350 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGT
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCC
Confidence 44556666677888888864332222221 11225668888 446667766678
Q ss_pred eEEEEEeCCCeeeEE
Q psy14258 422 TINVAKISDFSIRKV 436 (440)
Q Consensus 422 ~I~~~~~~g~~~~~~ 436 (440)
.|.+.++...+..++
T Consensus 351 ~i~~wd~~~~~~~~~ 365 (437)
T 3gre_A 351 SIVMFSLNELSSSKA 365 (437)
T ss_dssp EEEEEETTCGGGCEE
T ss_pred eEEEEECCCcccceE
Confidence 999999876443333
No 276
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=94.60 E-value=0.0098 Score=45.96 Aligned_cols=36 Identities=25% Similarity=0.703 Sum_probs=31.6
Q ss_pred CCceeecccCCC-CCCCCCCcccCCCceEEc-cCCeeee
Q psy14258 8 KTQCVDADECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 8 ~~~C~d~~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~ 44 (440)
+..| |++||.. ++.|++.|.+.+++|.|. ++||.+.
T Consensus 24 ~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~ 61 (107)
T 2w2n_E 24 QGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV 61 (107)
T ss_dssp SCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE
T ss_pred CCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc
Confidence 4678 7899996 579999999999999999 9999873
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.47 E-value=5.5 Score=41.59 Aligned_cols=193 Identities=8% Similarity=-0.076 Sum_probs=110.3
Q ss_pred EEEEEee-ecccEEEEEEcCCC----CceeEEeCCC-CCcceeeccccccceeeccccccce-eeeecCCcEEEe-----
Q psy14258 83 AIYFCTH-YMEHCMIAIDLNLS----KPRGIALDPT-SGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----- 150 (440)
Q Consensus 83 ~~~i~~d-~~~~~ly~~d~~~~----~I~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----- 150 (440)
..++.+. +.+++|.|+....+ .|+..++++. .. + ... +. .. ..+ +..+.++.||++
T Consensus 176 ~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l------~~~-~~-~~--~~~~~WspDg~~l~y~~~d~~ 243 (751)
T 2xe4_A 176 VMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--I------ADK-VS-GT--NGEIVWGPDHTSLFYVTKDET 243 (751)
T ss_dssp EEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--C------CCC-EE-EE--CSCCEECSSTTEEEEEEECTT
T ss_pred EeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--C------Ccc-cc-Cc--eeeEEEecCCCEEEEEEECCC
Confidence 6778899 88888877755433 3777777654 31 1 000 11 11 234 555566678877
Q ss_pred ---ceEEEEecCCceE--EEEEcC-CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC-ce--eEEecCccCceE
Q psy14258 151 ---EAIYFCTHYMEHC--MIAIDL-NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RF--PMVTHKIVYPYG 221 (440)
Q Consensus 151 ---~~I~~~~~dg~~~--~~~~~~-~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~-~~--~l~~~~~~~P~g 221 (440)
.+|.+.++.+... +.+... .-..-.++.+.|...+|+|+........|+..++++.. .. ..+......| -
T Consensus 244 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~ 322 (751)
T 2xe4_A 244 LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGV-R 322 (751)
T ss_dssp CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTC-C
T ss_pred CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCc-e
Confidence 2688888877532 233332 11234567888877789988755433689999998752 11 2222211111 1
Q ss_pred EEEe-CCCCEEEEEeCC----CCcEEEEEccC-CCcEE-EecCCccCceeeeeEecCEEEEEecCC--CeEEEEec
Q psy14258 222 VTVD-FPTKHVYWVDTY----LDFIDRINYDG-TDRKT-IRKGFPVQNLYDITVFENNLFVTSWRN--QSIIRVNK 288 (440)
Q Consensus 222 l~vD-~~~~~ly~~d~~----~~~i~~~~~dG-~~~~~-i~~~~~~~~p~gl~~~~~~ly~td~~~--~~i~~~~~ 288 (440)
..+| ..+++||+.... ..+|..+++++ ...+. +.....-....+++.+++.|+++-... ..|+.++.
T Consensus 323 ~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 323 YDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECSSEEEEEEEETTEEEEEEEEC
T ss_pred EEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEECCEEEEEEEeCCEEEEEEEec
Confidence 2343 358888886543 34899999874 33333 333211113456777888888776543 35666664
No 278
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=94.36 E-value=0.018 Score=47.29 Aligned_cols=37 Identities=24% Similarity=0.572 Sum_probs=27.9
Q ss_pred CCceeecccCCC-CCCCCCCc-ccCCCceEEc-cCCeeee
Q psy14258 8 KTQCVDADECLI-DGSCDQTC-TNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 8 ~~~C~d~~~C~~-~~~Cs~~C-~n~~~~~~C~-~~g~~l~ 44 (440)
++.|+++++|.. ++.|.+.| .+++++|.|. +.||.+.
T Consensus 79 G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 79 GKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLA 118 (146)
T ss_dssp STTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEEC
T ss_pred CCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeC
Confidence 456887788875 45788888 8888888888 8888764
No 279
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=94.31 E-value=3.8 Score=39.05 Aligned_cols=272 Identities=7% Similarity=-0.019 Sum_probs=149.5
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceEEEEEc--CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHCMIAID--LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT 213 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~--~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~ 213 (440)
.+||-.+++.-+ +.|.+-+.....+..++. .......+|+..|...+|...... +.|...++..........
T Consensus 110 ~l~wS~~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D---g~v~iWd~~~~~~~~~~~ 186 (420)
T 4gga_A 110 LVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQQQKRLRNMT 186 (420)
T ss_dssp CEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SCEEEEETTTTEEEEEEC
T ss_pred eEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC---CeEEEEEcCCCcEEEEEe
Confidence 588987775544 788888887655544443 223457899999954455444433 578888876443322222
Q ss_pred cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEE-ecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCC
Q psy14258 214 HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTI-RKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 214 ~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i-~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g 291 (440)
..-.....++.| ...|... ...+.+...+......... ..+ ......++....+ ....+-...+.|...+..++
T Consensus 187 ~h~~~v~~~s~~--~~~l~sg-s~d~~i~~~d~~~~~~~~~~~~~-h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 187 SHSARVGSLSWN--SYILSSG-SRSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp CCSSCEEEEEEE--TTEEEEE-ETTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred CCCCceEEEeeC--CCEEEEE-eCCCceeEeeecccceeeEEecc-cccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 222334455554 3444433 3455666666544333221 122 1234455555433 44444445666666665554
Q ss_pred CceE----EEecCCCC-eEEEEeccCCCCCCCCCceeEEeec-CCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc
Q psy14258 292 DDYE----TIANFSRP-FAIHIYHRQKQPDALKPSTFLLYAK-GKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE 365 (440)
Q Consensus 292 ~~~~----~~~~~~~p-~~~~v~~~~~qp~~~~~~~~l~~~~-~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~ 365 (440)
+... .......+ ..+. +.+.. ...|..+. +..+.|+..++... .....+.....+..+.+.+
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~-~~p~~-------~~~la~~~gs~D~~I~iwd~~t~----~~~~~~~~~~~v~~~~~~~ 330 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVA-WCPWQ-------SNVLATGGGTSDRHIRIWNVCSG----ACLSAVDAHSQVCSILWSP 330 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEE-ECTTC-------TTEEEEEECTTTCEEEEEETTTT----EEEEEEECSSCEEEEEEET
T ss_pred cccceeeeeecccCCceeeee-eCCCc-------ccEEEEEeecCCCEEEEEeCCcc----ccceeeccccceeeeeecC
Confidence 3321 11111111 2222 21111 12333322 23467888887655 3333344445677899999
Q ss_pred CCCEEEEEEC-CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 366 KEEYIYYAEL-TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 366 ~~~~vy~~d~-~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.++.++.+.. ..+.|+..++........+...-+.+..||+.+.+..|. |-...++|.+-++..
T Consensus 331 ~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 331 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAADETLRLWRCFE 395 (420)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETTTEEEEECCSC
T ss_pred CCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecCCeEEEEECCC
Confidence 9998887753 468898888865443333333456789999998776554 545567888877653
No 280
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=94.26 E-value=3.3 Score=38.18 Aligned_cols=258 Identities=12% Similarity=0.032 Sum_probs=133.2
Q ss_pred ceEEEEecCCc-------eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEE
Q psy14258 151 EAIYFCTHYME-------HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVT 223 (440)
Q Consensus 151 ~~I~~~~~dg~-------~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~ 223 (440)
+.|.+-++... .....+.........+++.|...+|.-+... +.|...++........+...-.....++
T Consensus 49 ~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D---~~v~lwd~~~~~~~~~~~~h~~~v~~v~ 125 (343)
T 2xzm_R 49 KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD---KTLRLWDLRTGTTYKRFVGHQSEVYSVA 125 (343)
T ss_dssp SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT---SEEEEEETTSSCEEEEEECCCSCEEEEE
T ss_pred CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC---CcEEEEECCCCcEEEEEcCCCCcEEEEE
Confidence 56666665432 1122233344567899999855555544433 5788888764333222232334567899
Q ss_pred EeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecC-CccCceeeeeEecC-----------EEEEEecCCCeEEEEeccCC
Q psy14258 224 VDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKG-FPVQNLYDITVFEN-----------NLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 224 vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~-~~~~~p~gl~~~~~-----------~ly~td~~~~~i~~~~~~~g 291 (440)
+.+.+..|+-+. ..+.|...++.+......... ........+++..+ .++.+-...+.|...+. .+
T Consensus 126 ~sp~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~ 203 (343)
T 2xzm_R 126 FSPDNRQILSAG-AEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NF 203 (343)
T ss_dssp ECSSTTEEEEEE-TTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TT
T ss_pred ECCCCCEEEEEc-CCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CC
Confidence 987777776554 456777777765433222211 00111233333322 23444444566666663 23
Q ss_pred CceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEE
Q psy14258 292 DDYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYI 370 (440)
Q Consensus 292 ~~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~v 370 (440)
+....+..-. ....+.+. |++.++++-+..+.|+..++....... .....-.....++|++.+..+
T Consensus 204 ~~~~~~~~h~~~v~~~~~s----------~~g~~l~sgs~dg~v~iwd~~~~~~~~---~~~~~~~~v~~v~~sp~~~~l 270 (343)
T 2xzm_R 204 QIRYTFKAHESNVNHLSIS----------PNGKYIATGGKDKKLLIWDILNLTYPQ---REFDAGSTINQIAFNPKLQWV 270 (343)
T ss_dssp EEEEEEECCSSCEEEEEEC----------TTSSEEEEEETTCEEEEEESSCCSSCS---EEEECSSCEEEEEECSSSCEE
T ss_pred ceeEEEcCccccceEEEEC----------CCCCEEEEEcCCCeEEEEECCCCcccc---eeecCCCcEEEEEECCCCCEE
Confidence 2222222222 23334332 343344444445788888874331111 111122346789999987655
Q ss_pred EEEECCCCeEEEEecCCCCeEE--EEE-----------CCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 371 YYAELTSYVIERRKMFGRGKEV--VID-----------TGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 371 y~~d~~~~~I~r~~~~g~~~~~--~~~-----------~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
..+ ..+.|+..++....... .+. .....+..||+.+.+..|+... ..++|.+.++.
T Consensus 271 a~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~-~Dg~v~~w~~~ 339 (343)
T 2xzm_R 271 AVG--TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF-TDGVIRTFSFE 339 (343)
T ss_dssp EEE--ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE-TTSEEEEEEEE
T ss_pred EEE--CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec-CCceEEEEEEE
Confidence 433 35567767765422211 111 0113467899988787776654 46788888765
No 281
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.23 E-value=3.6 Score=38.48 Aligned_cols=172 Identities=9% Similarity=0.019 Sum_probs=90.6
Q ss_pred CCcEEEe---ceEEEEec-CCceEEEEEcCC----CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCC-CCCceeEEec
Q psy14258 144 THKIVYP---EAIYFCTH-YMEHCMIAIDLN----LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLD-GTERFPMVTH 214 (440)
Q Consensus 144 ~~~lY~~---~~I~~~~~-dg~~~~~~~~~~----~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~d-G~~~~~l~~~ 214 (440)
++.||+. +.+...+. +|+..-..-... .......+++ .+.||+.... +.+...+.. |...-..-
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~---g~l~~~d~~tG~~~w~~~-- 215 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDN---GRVSAVLMEQGQMIWQQR-- 215 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTT---TEEEEEETTTCCEEEEEE--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCC---CEEEEEECCCCcEEEEEe--
Confidence 5667776 66777776 455433221110 0001233343 3667765433 467777663 43222111
Q ss_pred CccCc-------------eEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCC
Q psy14258 215 KIVYP-------------YGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQ 281 (440)
Q Consensus 215 ~~~~P-------------~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~ 281 (440)
...| ....++ +++||+.. ..+.+..++........-.. ...+.++.+.++.||+... .+
T Consensus 216 -~~~~~~~~~~~~~~~~~~~p~~~--~~~v~~~~-~~g~l~~~d~~tG~~~w~~~---~~~~~~~~~~~~~l~~~~~-~g 287 (376)
T 3q7m_A 216 -ISQATGSTEIDRLSDVDTTPVVV--NGVVFALA-YNGNLTALDLRSGQIMWKRE---LGSVNDFIVDGNRIYLVDQ-ND 287 (376)
T ss_dssp -CCC-----------CCCCCCEEE--TTEEEEEC-TTSCEEEEETTTCCEEEEEC---CCCEEEEEEETTEEEEEET-TC
T ss_pred -cccCCCCcccccccccCCCcEEE--CCEEEEEe-cCcEEEEEECCCCcEEeecc---CCCCCCceEECCEEEEEcC-CC
Confidence 1111 112333 68888875 45688888874333322222 3346678888999999985 67
Q ss_pred eEEEEeccCCCceEEEecCCC--CeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC
Q psy14258 282 SIIRVNKFNSDDYETIANFSR--PFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 282 ~i~~~~~~~g~~~~~~~~~~~--p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~ 342 (440)
.|..++..+|+..-....... .....+. ++.|++.+. .+.++.++....
T Consensus 288 ~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-----------~~~l~v~~~-~g~l~~~d~~tG 338 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSDLLHRLLTSPVLY-----------NGNLVVGDS-EGYLHWINVEDG 338 (376)
T ss_dssp CEEEEETTTCCEEEEECTTTTSCCCCCEEE-----------TTEEEEECT-TSEEEEEETTTC
T ss_pred eEEEEECCCCcEEEeecccCCCcccCCEEE-----------CCEEEEEeC-CCeEEEEECCCC
Confidence 899999888865432221111 1111111 356666654 267777776443
No 282
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=94.16 E-value=0.02 Score=47.53 Aligned_cols=36 Identities=19% Similarity=0.319 Sum_probs=31.2
Q ss_pred CceeecccCCCC--CCCCCCcccCCCceEEc-cCCeeee
Q psy14258 9 TQCVDADECLID--GSCDQTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 9 ~~C~d~~~C~~~--~~Cs~~C~n~~~~~~C~-~~g~~l~ 44 (440)
..|.|++||..+ +.|+|.|.|.+++|+|. .+||.|.
T Consensus 112 y~~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 112 YVATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EEEEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEEC
T ss_pred eecccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEEC
Confidence 358899999963 68999999999999999 9999975
No 283
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.11 E-value=3.6 Score=38.04 Aligned_cols=277 Identities=9% Similarity=-0.018 Sum_probs=145.5
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceE--EEEE-cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeE-
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHC--MIAI-DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPM- 211 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~--~~~~-~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l- 211 (440)
|+.+.+..|.-+ +.|.+-++++... .... ........++++.|...+|.-.... +.|...+.+....+.+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---~~v~iw~~~~~~~~~~~ 99 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---ATTCIWKKNQDDFECVT 99 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT---SCEEEEEECCC-EEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC---CcEEEEEccCCCeEEEE
Confidence 666655544444 6777777766542 2222 2334568899999965555555544 3555555554332222
Q ss_pred -EecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc-EEEec-CCccCceeeeeEecC-EEEEEecCCCeEEEEe
Q psy14258 212 -VTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR-KTIRK-GFPVQNLYDITVFEN-NLFVTSWRNQSIIRVN 287 (440)
Q Consensus 212 -~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~-~~i~~-~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~ 287 (440)
+...-.....+++.+.+..|.-+. ..+.|...+++.... ..+.. .........+++..+ .++.+-...+.|...+
T Consensus 100 ~~~~h~~~v~~v~~sp~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~ 178 (345)
T 3fm0_A 100 TLEGHENEVKSVAWAPSGNLLATCS-RDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYR 178 (345)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEE-TTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred EccCCCCCceEEEEeCCCCEEEEEE-CCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 222234567899987766666554 456777777754432 22211 111233456666543 4444444566666555
Q ss_pred ccCCCceE--EEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCc-----------eeeeeec
Q psy14258 288 KFNSDDYE--TIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTE-----------QAIMPIT 353 (440)
Q Consensus 288 ~~~g~~~~--~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~-----------~~~~~~~ 353 (440)
..+++... .+.+-. ....+.+. |++.++++-+..+.|+..+....+... .....+.
T Consensus 179 ~~~~~~~~~~~~~~h~~~v~~l~~s----------p~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
T 3fm0_A 179 EEEDDWVCCATLEGHESTVWSLAFD----------PSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLS 248 (345)
T ss_dssp EETTEEEEEEEECCCSSCEEEEEEC----------TTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEEC
T ss_pred ecCCCEEEEEEecCCCCceEEEEEC----------CCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEec
Confidence 54443221 222211 23344333 333333333334666655532110100 0111222
Q ss_pred C--CCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCC------eEEEEE---CCCCCeeeEEEecCCCcEEEEeCCCCe
Q psy14258 354 D--LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRG------KEVVID---TGIYNVEGMAVDWMANNLYWTDAGIGT 422 (440)
Q Consensus 354 ~--~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~------~~~~~~---~~~~~~~glAvD~~~~~lYwtd~~~~~ 422 (440)
+ -.....+++.+.++.+. +-...+.|+..+.+... ...... ..-..+..+|+.+.+..+..+-...++
T Consensus 249 ~~h~~~v~~v~~~~~~~~l~-s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~ 327 (345)
T 3fm0_A 249 GFHSRTIYDIAWCQLTGALA-TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGE 327 (345)
T ss_dssp SSCSSCEEEEEECTTTCCEE-EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSC
T ss_pred CCCCCcEEEEEEecCCCEEE-EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCc
Confidence 2 22456899998877554 44467777777765421 111111 233568889998877667777777788
Q ss_pred EEEEEeCC
Q psy14258 423 INVAKISD 430 (440)
Q Consensus 423 I~~~~~~g 430 (440)
|.+-++..
T Consensus 328 v~~W~~~~ 335 (345)
T 3fm0_A 328 VAFWKYQR 335 (345)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99988876
No 284
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.95 E-value=4.3 Score=38.33 Aligned_cols=194 Identities=8% Similarity=-0.012 Sum_probs=106.9
Q ss_pred ceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 219 PYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 219 P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
...+++.+.+..|..+. ..+.|...++..........+. ......+++..+ ...++-...+.|...+..+++....+
T Consensus 126 v~~v~~s~dg~~l~s~~-~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGA-EDRLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp EEEEEECTTSSEEEEEE-TTSCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEc-CCCeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 56788987776666554 5677888887655443333321 334567777644 34445556778877787666554444
Q ss_pred ecCCCCeEEEEeccCCCCCCCCC-ceeEEeecCCccEEEEEEcCCCCCCceeeeee--------cCCCCceEEEEEcCCC
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI--------TDLKRPSVIDYHEKEE 368 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~--------~~~~~p~~l~~d~~~~ 368 (440)
........+.+. | ++.++++-+..+.|+..++... . ....+ ..-....+++|++.++
T Consensus 204 ~~~~~v~~~~~~----------~~~~~~l~~~s~d~~v~iwd~~~~-~---~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 204 SIEDGVTTVAVS----------PGDGKYIAAGSLDRAVRVWDSETG-F---LVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp ECSSCEEEEEEC----------STTCCEEEEEETTSCEEEEETTTC-C---EEEEEC------CCCSSCEEEEEECTTSS
T ss_pred EcCCCcEEEEEE----------CCCCCEEEEEcCCCcEEEEECCCC-c---EEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 322233334333 2 3334444344477887776554 1 11111 1123456899999877
Q ss_pred EEEEEECCCCeEEEEecCCCC------------eEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 369 YIYYAELTSYVIERRKMFGRG------------KEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 369 ~vy~~d~~~~~I~r~~~~g~~------------~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
.|+ +-...++|...++.... ........-..+..+++...+..|. +-...++|.+.++..
T Consensus 270 ~l~-s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 270 SVV-SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL-SGSKDRGVLFWDKKS 341 (393)
T ss_dssp EEE-EEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEE-EEETTSEEEEEETTT
T ss_pred EEE-EEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEE-EEeCCCeEEEEECCC
Confidence 664 44467788777765321 1112222334567788876555443 434456777777654
No 285
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=93.86 E-value=0.013 Score=47.83 Aligned_cols=38 Identities=34% Similarity=0.650 Sum_probs=32.7
Q ss_pred CCceeecccCCC-CCCCC--CCcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCVDADECLI-DGSCD--QTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~d~~~C~~-~~~Cs--~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+..|+|++||.. ...|. +.|.|++++|+|. +.||.+..
T Consensus 90 ~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~ 131 (143)
T 2bou_A 90 ENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRH 131 (143)
T ss_dssp GCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCT
T ss_pred CCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCC
Confidence 468999999985 56887 5899999999999 99998754
No 286
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=93.86 E-value=4.6 Score=38.41 Aligned_cols=237 Identities=10% Similarity=-0.031 Sum_probs=119.8
Q ss_pred ccce-eeeecCCcEEEe----ceEEEEecCC---ce---EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeC
Q psy14258 135 DGTE-RFPMVTHKIVYP----EAIYFCTHYM---EH---CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLL 203 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~----~~I~~~~~dg---~~---~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~ 203 (440)
.+.. ++.+..+.++++ +.|.+-++.. .. ..... .......+|++.|....|+.+... +.|...++
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d---g~i~vwd~ 140 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKD---GQIIVLKV 140 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETT---SEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCC---CEEEEEEe
Confidence 4555 666623334445 6787777654 11 11111 134568899999855555554443 46666665
Q ss_pred ----CCCCceeEEec-----------CccCceEEE--EeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCC-ccCceee
Q psy14258 204 ----DGTERFPMVTH-----------KIVYPYGVT--VDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGF-PVQNLYD 265 (440)
Q Consensus 204 ----dG~~~~~l~~~-----------~~~~P~gl~--vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~-~~~~p~g 265 (440)
.|.....+... .......+. ..+ .+.++++-...+.|...++............ .......
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~ 219 (437)
T 3gre_A 141 NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSS 219 (437)
T ss_dssp EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEE
T ss_pred ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEE
Confidence 33322211100 001112222 222 2444444445678888887654443333321 1345677
Q ss_pred eeEecC-EEEEEecCCCeEEEEeccCCCceEEEe-cCCC-CeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC
Q psy14258 266 ITVFEN-NLFVTSWRNQSIIRVNKFNSDDYETIA-NFSR-PFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 266 l~~~~~-~ly~td~~~~~i~~~~~~~g~~~~~~~-~~~~-p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~ 342 (440)
+++..+ .+..+-...+.|...+..+++....+. .... ...+. +++... +++.++++-+..+.|+..++...
T Consensus 220 ~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~-~~~~~s-----~~~~~l~s~~~dg~i~iwd~~~~ 293 (437)
T 3gre_A 220 ICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVE-VCQFYG-----KNSVIVVGGSSKTFLTIWNFVKG 293 (437)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEE-ECTTTC-----TTEEEEEEESTTEEEEEEETTTT
T ss_pred EEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEE-eccccC-----CCccEEEEEcCCCcEEEEEcCCC
Confidence 887644 445555557778888876665544432 1111 12222 222222 34445555455577888887644
Q ss_pred CCCceeeeeec---------------------------CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 343 GTTEQAIMPIT---------------------------DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 343 ~~~~~~~~~~~---------------------------~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
.....+. .......++++ ++.++++-...+.|+.-++...
T Consensus 294 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~--~~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 294 ----HCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS--NDKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp ----EEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE--TTEEEEEEGGGTEEEEEETTCG
T ss_pred ----cEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC--CceEEEecCCCCeEEEEECCCc
Confidence 1110000 01124478888 3456677777888888887643
No 287
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=93.76 E-value=0.028 Score=52.53 Aligned_cols=38 Identities=24% Similarity=0.596 Sum_probs=33.8
Q ss_pred CCcee-ecccCCC--CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCV-DADECLI--DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~-d~~~C~~--~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
++.|+ |++||.. ++.|.+.|.|..++|.|. +.||.+..
T Consensus 36 g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 36 GSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp SSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCT
T ss_pred CCccccCcccCCCCCCCCCcCccccCCCeeEEeccccccccc
Confidence 56899 9999986 479999999999999999 99998754
No 288
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=93.59 E-value=4 Score=36.79 Aligned_cols=199 Identities=6% Similarity=-0.069 Sum_probs=102.6
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeec-CCcEEEe----ceEEE
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMV-THKIVYP----EAIYF 155 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~-~~~lY~~----~~I~~ 155 (440)
.+.+++|++.++.|.... ..+.|+..++........ ....+...-..+.. ++.+. .++++++ +.|.+
T Consensus 13 ~v~~~~~~~~~~~l~~~~-~dg~i~iw~~~~~~~~~~------~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCS-SDQHIKVFKLDKDTSNWE------LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp CEEEEEECSSSSEEEEEE-TTSEEEEEEECSSSCCEE------EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred ceeEEEEcCCCCEEEEee-CCCeEEEEECCCCCCcce------ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 389999998766665554 446676666653221100 00011122223343 44432 2445555 67888
Q ss_pred EecCCc---------eEEEEEcCCCCCceEEEEcCC--CCeEEEEEcCCCCCcEEEEeCCCCCce-eEEe----------
Q psy14258 156 CTHYME---------HCMIAIDLNLSKPRGIALDPT--SGYMFFTKWGATRPMLERSLLDGTERF-PMVT---------- 213 (440)
Q Consensus 156 ~~~dg~---------~~~~~~~~~~~~P~~iavd~~--~g~lywtd~~~~~~~I~r~~~dG~~~~-~l~~---------- 213 (440)
.+++.. .....+........++++.|. ..+|+.+... +.|...++...... .+..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d---g~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND---GILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT---CEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC---CcEEEecCCChHHhccccccccccccccc
Confidence 888764 222333334567889999996 4445554443 57888886543211 1110
Q ss_pred --cCccCceEEEEeCC---CCEEEEEeCCCCcEEEEEccCCCcEEEec-CCccCceeeeeEecC-----EEEEEecCCCe
Q psy14258 214 --HKIVYPYGVTVDFP---TKHVYWVDTYLDFIDRINYDGTDRKTIRK-GFPVQNLYDITVFEN-----NLFVTSWRNQS 282 (440)
Q Consensus 214 --~~~~~P~gl~vD~~---~~~ly~~d~~~~~i~~~~~dG~~~~~i~~-~~~~~~p~gl~~~~~-----~ly~td~~~~~ 282 (440)
........+++.+. ...|..+. ..+.+............+.. .........+++..+ .++.+-...+.
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred cCCcccceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 11234566777765 45555544 33444333333333322322 111234567777655 56666666777
Q ss_pred EEEEeccCC
Q psy14258 283 IIRVNKFNS 291 (440)
Q Consensus 283 i~~~~~~~g 291 (440)
|...+..++
T Consensus 242 i~iwd~~~~ 250 (351)
T 3f3f_A 242 IRIFKITEK 250 (351)
T ss_dssp EEEEEEEEC
T ss_pred EEEEeCCCC
Confidence 776666544
No 289
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=93.40 E-value=5.1 Score=37.46 Aligned_cols=198 Identities=13% Similarity=0.099 Sum_probs=106.4
Q ss_pred CceEEEEeCCCCEEEEEeCC-CCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceE
Q psy14258 218 YPYGVTVDFPTKHVYWVDTY-LDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~~-~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
++..+++.+.+..|..+-.. .+.|..-+............ -....++++..+ .+..+- ..+.+..++..+++...
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~--~~~V~~v~fspdg~~l~s~-s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIET--RGEVKDLHFSTDGKVVAYI-TGSSLEVISTVTGSCIA 211 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEEC--SSCCCEEEECTTSSEEEEE-CSSCEEEEETTTCCEEE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCC--CCceEEEEEccCCceEEec-cceeEEEEEeccCccee
Confidence 45678888878888776543 34666666654333222222 234567887655 333332 34566667766665443
Q ss_pred EEecCCC---CeEEEEeccCCCCCCCCCc-eeEEeecCCc---cEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCC
Q psy14258 296 TIANFSR---PFAIHIYHRQKQPDALKPS-TFLLYAKGKP---AIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKE 367 (440)
Q Consensus 296 ~~~~~~~---p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~---~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~ 367 (440)
....... ...+++. |+ .+|+.+.... ..++..++............+.+ .....+++|.|.+
T Consensus 212 ~~~~~~~~~~v~~v~fs----------pdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFI----------ADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp EECCCCTTEEEEEEEEE----------ETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred eeecCCCCCCEEEEEEc----------CCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 2222211 2233332 23 3333332211 13444554433000011122222 2345689999987
Q ss_pred CEEEEEECCCCeEEEEecCCCCe-EEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 368 EYIYYAELTSYVIERRKMFGRGK-EVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 368 ~~vy~~d~~~~~I~r~~~~g~~~-~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+.|..+ ...++|+-.++..... ..+....-..+..||+.+.++. ..+-+..++|.+.++..
T Consensus 282 ~~lasg-s~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~-laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 282 ELAVLA-SNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTY-VASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEE-ETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCE-EEEEETTSEEEEEECCT
T ss_pred CceEEE-cCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCE-EEEEeCCCeEEEEEcCC
Confidence 765544 4678898888864322 2222334567899999987764 45556678999999853
No 290
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.30 E-value=9 Score=39.97 Aligned_cols=232 Identities=12% Similarity=0.029 Sum_probs=120.9
Q ss_pred CCCeEEEEEcCCC--CCcEEEEeC---CCC--CceeEEecC-------ccCceEEEEe-CCCCEEEEEeCCCC----cEE
Q psy14258 182 TSGYMFFTKWGAT--RPMLERSLL---DGT--ERFPMVTHK-------IVYPYGVTVD-FPTKHVYWVDTYLD----FID 242 (440)
Q Consensus 182 ~~g~lywtd~~~~--~~~I~r~~~---dG~--~~~~l~~~~-------~~~P~gl~vD-~~~~~ly~~d~~~~----~i~ 242 (440)
..+++||+-.... .+.+.|... +|. ..++++..+ ...-.+.++. +.+.+|.|+....+ .|+
T Consensus 125 ~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~ 204 (751)
T 2xe4_A 125 YGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIE 204 (751)
T ss_dssp ETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEE
T ss_pred ECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEE
Confidence 4588999864332 245788877 665 556665432 1134567888 88888877655433 499
Q ss_pred EEEccCC-CcEEEecCCccCc-eeeeeEe--cCEEEEEecCC----CeEEEEeccCCCce--EEEecCCCCeEEEEeccC
Q psy14258 243 RINYDGT-DRKTIRKGFPVQN-LYDITVF--ENNLFVTSWRN----QSIIRVNKFNSDDY--ETIANFSRPFAIHIYHRQ 312 (440)
Q Consensus 243 ~~~~dG~-~~~~i~~~~~~~~-p~gl~~~--~~~ly~td~~~----~~i~~~~~~~g~~~--~~~~~~~~p~~~~v~~~~ 312 (440)
..++++. .. +... +.. ..+++.. +..||++.... ..|++.+..++... .+.......+.+.+.
T Consensus 205 v~dl~~g~~~--l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~--- 277 (751)
T 2xe4_A 205 FKRISDPSQT--IADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMY--- 277 (751)
T ss_dssp EEETTCTTCC--CCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEE---
T ss_pred EEECCCCCEe--CCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEE---
Confidence 9999876 42 1110 111 1245554 34777765421 36777776554422 232222122222111
Q ss_pred CCCCCCCCceeEEeecC--CccEEEEEEcCCCCCCce-eeeeecCCCCc-eEEEEEcCCCEEEEEECC----CCeEEEEe
Q psy14258 313 KQPDALKPSTFLLYAKG--KPAIIKGLTFKRDGTTEQ-AIMPITDLKRP-SVIDYHEKEEYIYYAELT----SYVIERRK 384 (440)
Q Consensus 313 ~qp~~~~~~~~l~~~~~--~~~~I~~i~~~~~~~~~~-~~~~~~~~~~p-~~l~~d~~~~~vy~~d~~----~~~I~r~~ 384 (440)
..| .+.+|++... ....|+.+++++. .... ..........+ ..+++ ..++.+|+.... ...|++++
T Consensus 278 ~Sp----Dg~~l~~~~~~~~~~~l~~~d~~~~-~~~~~~~~l~~~~~~~~~s~~~-~~g~~l~~~t~~~~a~~~~L~~~d 351 (751)
T 2xe4_A 278 KAA----DTNTLCIGSQSPETAEVHLLDLRKG-NAHNTLEIVRPREKGVRYDVQM-HGTSHLVILTNEGGAVNHKLLIAP 351 (751)
T ss_dssp ECT----TSSEEEEEEECSSCEEEEEEESSSC-TTCCCEEESSCCCTTCCEEEEE-ETTTEEEEEECTTTCTTCEEEEEE
T ss_pred ECC----CCCEEEEEecCCCCceEEEEECCCC-CCCceeEEeecCCCCceEEEee-eeCCEEEEEeCCCCCCCcEEEEEc
Confidence 111 1245655432 2467888888764 1111 01111111122 22332 237788877543 45899999
Q ss_pred cCC-CCeEE-EEECCCC-CeeeEEEecCCCcEEEEeC--CCCeEEEEEe
Q psy14258 385 MFG-RGKEV-VIDTGIY-NVEGMAVDWMANNLYWTDA--GIGTINVAKI 428 (440)
Q Consensus 385 ~~g-~~~~~-~~~~~~~-~~~glAvD~~~~~lYwtd~--~~~~I~~~~~ 428 (440)
+++ ...+. ++..+-+ ...+++ +.++.||++-. +...|.++++
T Consensus 352 ~~~~~~~~~~li~~~~~~~l~~~~--~~~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 352 RGQPSDWSHVLVDHSEDVFMESIA--VRSNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTSTTCCCCEEECCCSSEEEEEEE--ECSSEEEEEEEETTEEEEEEEEC
T ss_pred CCCcccceeeEECCCCCcEEEEEE--EECCEEEEEEEeCCEEEEEEEec
Confidence 874 23233 4443322 234444 45788888744 4456777775
No 291
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.25 E-value=5.1 Score=36.99 Aligned_cols=283 Identities=8% Similarity=0.025 Sum_probs=140.1
Q ss_pred eEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEe
Q psy14258 82 EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCT 157 (440)
Q Consensus 82 ~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~ 157 (440)
.+.+++|++.++.|. +-...+.|+..++....... ........-..... ++.+.++.|.-+ +.|.+-+
T Consensus 18 ~v~~l~~sp~g~~la-s~~~D~~i~iw~~~~~~~~~-------~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLA-SCGGDRRIRIWGTEGDSWIC-------KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp CEEEEEECTTSSCEE-EEETTSCEEEEEEETTEEEE-------EEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cEEEEEECCCCCEEE-EEcCCCeEEEEEcCCCccee-------eeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 388999998766554 44445666655554321100 00001112234555 666666555444 5677766
Q ss_pred cCCceE--EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE---ecCccCceEEEEeCCCCEEE
Q psy14258 158 HYMEHC--MIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV---THKIVYPYGVTVDFPTKHVY 232 (440)
Q Consensus 158 ~dg~~~--~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~---~~~~~~P~gl~vD~~~~~ly 232 (440)
.+.... ...+........++++.|. |.++.+-... +.|...+++.......+ .........+++.+.+..|.
T Consensus 90 ~~~~~~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 166 (345)
T 3fm0_A 90 KNQDDFECVTTLEGHENEVKSVAWAPS-GNLLATCSRD--KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLA 166 (345)
T ss_dssp ECCC-EEEEEEECCCSSCEEEEEECTT-SSEEEEEETT--SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEE
T ss_pred ccCCCeEEEEEccCCCCCceEEEEeCC-CCEEEEEECC--CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEE
Confidence 665432 2233334466889999995 5444443332 47777777654332222 22233467788887766666
Q ss_pred EEeCCCCcEEEEEccCCCcEEE--ecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCceE--------------
Q psy14258 233 WVDTYLDFIDRINYDGTDRKTI--RKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDYE-------------- 295 (440)
Q Consensus 233 ~~d~~~~~i~~~~~dG~~~~~i--~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~~-------------- 295 (440)
.+. ..+.|...+........+ ..+ ......++++..+ ..+.+-...+.|...+........
T Consensus 167 s~s-~d~~i~~w~~~~~~~~~~~~~~~-h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 167 SAS-YDDTVKLYREEEDDWVCCATLEG-HESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEE-TTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEe-CCCcEEEEEecCCCEEEEEEecC-CCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 554 455676666654432221 122 1334567777654 444444455665544432211100
Q ss_pred -EEecCC--CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCc--eeeee--e--cCCCCceEEEEEcC
Q psy14258 296 -TIANFS--RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTE--QAIMP--I--TDLKRPSVIDYHEK 366 (440)
Q Consensus 296 -~~~~~~--~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~--~~~~~--~--~~~~~p~~l~~d~~ 366 (440)
.+.... ....+... +.+.++++-+..+.|+..+.+...... ..... . ..-....+++|.|.
T Consensus 245 ~~~~~~h~~~v~~v~~~----------~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 314 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWC----------QLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK 314 (345)
T ss_dssp EEECSSCSSCEEEEEEC----------TTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSS
T ss_pred EEecCCCCCcEEEEEEe----------cCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCC
Confidence 011100 11122111 222223333334677777765441111 11111 1 11234568999987
Q ss_pred CCEEEEEECCCCeEEEEecCC
Q psy14258 367 EEYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 367 ~~~vy~~d~~~~~I~r~~~~g 387 (440)
+..++.+-...++|..-++..
T Consensus 315 ~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 315 EPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp STTEEEEEETTSCEEEEEECC
T ss_pred CceEEEEcCCCCcEEEEEecC
Confidence 755666666677777666654
No 292
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=93.16 E-value=0.053 Score=44.13 Aligned_cols=38 Identities=32% Similarity=0.516 Sum_probs=31.8
Q ss_pred CCCceeecccCCCC--CCCC--CCcccCCCceEEc-cCCeeee
Q psy14258 7 NKTQCVDADECLID--GSCD--QTCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 7 ~~~~C~d~~~C~~~--~~Cs--~~C~n~~~~~~C~-~~g~~l~ 44 (440)
+++.|+|++||... ..|. ..|.+++++|+|. .+||.+.
T Consensus 37 ~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 37 PMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPV 79 (143)
T ss_dssp TTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEET
T ss_pred CCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccC
Confidence 46889999999974 3687 4899999999999 9999875
No 293
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=92.97 E-value=5 Score=36.12 Aligned_cols=248 Identities=9% Similarity=-0.028 Sum_probs=125.6
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce-eEE---ecCccCceEEEEeCC--CCEEEEEeCCCCcEEE
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF-PMV---THKIVYPYGVTVDFP--TKHVYWVDTYLDFIDR 243 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~-~l~---~~~~~~P~gl~vD~~--~~~ly~~d~~~~~i~~ 243 (440)
.......|+++|...+|...... +.|...+++..... .+. ...-.....+++.+. +..|+.+ ...+.|..
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~-~~dg~v~v 85 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSSD---QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASA-SYDKTVKL 85 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEETT---SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEE-ETTSCEEE
T ss_pred cccceeEEEEcCCCCEEEEeeCC---CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEE-cCCCeEEE
Confidence 44567899999954455544433 57777777643221 221 222345678888764 4444444 45677877
Q ss_pred EEccCCCc-------EEEec-CCccCceeeeeEec---CEEEEEecCCCeEEEEeccCCCceEEEe------cC------
Q psy14258 244 INYDGTDR-------KTIRK-GFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNSDDYETIA------NF------ 300 (440)
Q Consensus 244 ~~~dG~~~-------~~i~~-~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g~~~~~~~------~~------ 300 (440)
.++..... ..+.. .........+++.. +.++++-..++.|...+..+++....+. ..
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPAN 165 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCC
Confidence 77765321 22211 11133456777764 3344444456777777766554322110 00
Q ss_pred --CCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCCC---EEEEEE
Q psy14258 301 --SRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKEE---YIYYAE 374 (440)
Q Consensus 301 --~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~~---~vy~~d 374 (440)
.....+... |... ....|+++.. .+.+........ .. .....+.+ -....++++.+.+. .++.+-
T Consensus 166 ~~~~~~~~~~~-p~~~-----~~~~l~~~~~-~~~~~~~~~~~~-~~-~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~ 236 (351)
T 3f3f_A 166 HLQSDFCLSWC-PSRF-----SPEKLAVSAL-EQAIIYQRGKDG-KL-HVAAKLPGHKSLIRSISWAPSIGRWYQLIATG 236 (351)
T ss_dssp CSCCCEEEEEC-CCSS-----SCCEEEEEET-TEEEEEEECTTS-CE-EEEEECCCCCSCEEEEEECCCSSCSSEEEEEE
T ss_pred cccceeEEEec-cCCC-----CCcEEEEecC-CCcEEEEccCCC-ce-eeeeecCCCCcceeEEEECCCCCCcceEEEEE
Confidence 011112111 1100 0234444433 244422222221 11 11222222 22456899998762 455665
Q ss_pred CCCCeEEEEecCCCC--------------------------------------------eEEE--EECCCCCeeeEEEec
Q psy14258 375 LTSYVIERRKMFGRG--------------------------------------------KEVV--IDTGIYNVEGMAVDW 408 (440)
Q Consensus 375 ~~~~~I~r~~~~g~~--------------------------------------------~~~~--~~~~~~~~~glAvD~ 408 (440)
...+.|+..++.... .+.+ ....-..+..|++.+
T Consensus 237 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~ 316 (351)
T 3f3f_A 237 CKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL 316 (351)
T ss_dssp ETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECS
T ss_pred cCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC
Confidence 567777777765421 0111 112335688999998
Q ss_pred CCCcEEEEeCCCCeEEEEEeCCC
Q psy14258 409 MANNLYWTDAGIGTINVAKISDF 431 (440)
Q Consensus 409 ~~~~lYwtd~~~~~I~~~~~~g~ 431 (440)
.++.|.-+. ..+.|.+.+++..
T Consensus 317 ~~~~l~s~~-~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 317 TGTILSSAG-DDGKVRLWKATYS 338 (351)
T ss_dssp SSCCEEEEE-TTSCEEEEEECTT
T ss_pred CCCEEEEec-CCCcEEEEecCcC
Confidence 776555554 4678999998753
No 294
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=92.92 E-value=11 Score=40.13 Aligned_cols=195 Identities=8% Similarity=0.000 Sum_probs=109.4
Q ss_pred CceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEE
Q psy14258 218 YPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETI 297 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~ 297 (440)
....+++++.+..|..+. ..+.|...+..+......... -.....+++..+.+..+-...+.|...+..+++....+
T Consensus 19 ~V~~lafspdg~~lAsgs-~Dg~I~lw~~~~~~~~~~~~~--~~~V~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIAT-VTGEVHIYGQQQVEVVIKLED--RSAIKEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp CEEEEEEETTTTEEEEEE-TTSEEEEECSTTCEEEEECSS--CCCEEEEEEETTTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CcEEEEECCCCCEEEEEe-CCCEEEEEeCCCcEEEEEcCC--CCCEEEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 467889998777766654 456777776655433222211 22346777765654444445777877787766655444
Q ss_pred ecCCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeee---------eecCCCCceEEEEEcCC
Q psy14258 298 ANFSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIM---------PITDLKRPSVIDYHEKE 367 (440)
Q Consensus 298 ~~~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~---------~~~~~~~p~~l~~d~~~ 367 (440)
........+.+. |+ .+|+.+.. .+.|+..+++.. ......+ +........+++|+|.+
T Consensus 96 ~~~~~V~~v~~s----------p~g~~l~sgs~-dg~V~lwd~~~~-~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 96 FVPGKITSIDTD----------ASLDWMLIGLQ-NGSMIVYDIDRD-QLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp ECSSCEEEEECC----------TTCSEEEEEET-TSCEEEEETTTT-EEEEEEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred cCCCCEEEEEEC----------CCCCEEEEEcC-CCcEEEEECCCC-ccccceeccccccccccccCCCCeEEEEEccCC
Confidence 321122233222 33 44555433 478888888765 1100000 01112345689999976
Q ss_pred CEEEEEECCCCeEEEEecCCCCeEEEEECC------------------CCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 368 EYIYYAELTSYVIERRKMFGRGKEVVIDTG------------------IYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 368 ~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~------------------~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
+.+..+-...+.| --++........+... -..+..+++.+.+. +..+-...++|.+.++.
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETT
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECC
Confidence 5555666677788 7777654322222211 13478899987655 55555556788888874
No 295
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=92.63 E-value=0.053 Score=42.25 Aligned_cols=38 Identities=16% Similarity=0.416 Sum_probs=31.2
Q ss_pred CCceeec---ccCCC-CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCVDA---DECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~d~---~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+..|++. ++|.. ++.|.+.|.|+.++|+|. +.||.+..
T Consensus 45 G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 45 GRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGD 87 (114)
T ss_dssp STTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECT
T ss_pred CCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECC
Confidence 3458865 46984 678999999999999999 99999754
No 296
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=92.61 E-value=0.061 Score=39.47 Aligned_cols=33 Identities=36% Similarity=0.704 Sum_probs=27.7
Q ss_pred eecccCCC-CCCCCC-CcccCCCceEEc-cCCeeee
Q psy14258 12 VDADECLI-DGSCDQ-TCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 12 ~d~~~C~~-~~~Cs~-~C~n~~~~~~C~-~~g~~l~ 44 (440)
+|+|||.. +..|.+ .|.|++++|+|. ++||.+.
T Consensus 1 ~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~ 36 (86)
T 1lmj_A 1 TDIDECRISPDLCGRGQCVNTPGDFECKCDEGYESG 36 (86)
T ss_dssp CCCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEEC
T ss_pred CccccccCCCCCCCCCEEECCCCCEEeeCCCCcCcc
Confidence 37899985 456876 899999999999 9999864
No 297
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=92.51 E-value=7.6 Score=37.05 Aligned_cols=267 Identities=7% Similarity=-0.059 Sum_probs=139.5
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccceeeeecCCcEEEe---ceEEEEecC
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYP---EAIYFCTHY 159 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~avD~~~~~lY~~---~~I~~~~~d 159 (440)
+.++++| ++. .++-...+.|+..++..... . ..+...-..+. ++.+.++.|+.+ +.|.+.++.
T Consensus 136 v~~~~~d--~~~-l~~g~~dg~i~iwd~~~~~~--~--------~~~~~h~~~v~-~l~~~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 136 VYCLQYD--DQK-IVSGLRDNTIKIWDKNTLEC--K--------RILTGHTGSVL-CLQYDERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp EEEEECC--SSE-EEEEESSSCEEEEESSSCCE--E--------EEECCCSSCEE-EEECCSSEEEEEETTSCEEEEESS
T ss_pred EEEEEEC--CCE-EEEEeCCCeEEEEeCCCCeE--E--------EEEcCCCCcEE-EEEECCCEEEEEcCCCeEEEEECC
Confidence 6677764 344 44444556776665542211 0 01111111122 666644434333 689998887
Q ss_pred CceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCcee---EEecCccCceEEEEeCCCCEEEEEeC
Q psy14258 160 MEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFP---MVTHKIVYPYGVTVDFPTKHVYWVDT 236 (440)
Q Consensus 160 g~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~---l~~~~~~~P~gl~vD~~~~~ly~~d~ 236 (440)
.......+........+++.++ +.|+..... +.|...++....... ...........+++| +..|+.+.
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~d---g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~- 273 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKD---RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSAS- 273 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECCT--TEEEEEETT---SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--TTEEEEEE-
T ss_pred CCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCC---CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--CCEEEEEe-
Confidence 6554444444445677777764 555555543 578888886554332 222223345566764 56666654
Q ss_pred CCCcEEEEEccCCCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEecCC-CCeEEEEeccCCCC
Q psy14258 237 YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIANFS-RPFAIHIYHRQKQP 315 (440)
Q Consensus 237 ~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~p~~~~v~~~~~qp 315 (440)
..+.|...++..........+. ......+++.++.++.. ..++.|...+..+++....+..-. ....+.+.
T Consensus 274 ~dg~i~vwd~~~~~~~~~~~~~-~~~v~~~~~~~~~l~~g-~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~------ 345 (435)
T 1p22_A 274 GDRTIKVWNTSTCEFVRTLNGH-KRGIACLQYRDRLVVSG-SSDNTIRLWDIECGACLRVLEGHEELVRCIRFD------ 345 (435)
T ss_dssp TTSEEEEEETTTCCEEEEEECC-SSCEEEEEEETTEEEEE-ETTSCEEEEETTTCCEEEEECCCSSCEEEEECC------
T ss_pred CCCeEEEEECCcCcEEEEEcCC-CCcEEEEEeCCCEEEEE-eCCCeEEEEECCCCCEEEEEeCCcCcEEEEEec------
Confidence 4678888887654433333321 23456677766555544 457788888887776665554322 22333331
Q ss_pred CCCCCceeEEeecCCccEEEEEEcCCCCCCc-----eeeeeec-CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCC
Q psy14258 316 DALKPSTFLLYAKGKPAIIKGLTFKRDGTTE-----QAIMPIT-DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGR 388 (440)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~-----~~~~~~~-~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~ 388 (440)
..+|+.+ +..+.|+..++....... .....+. .-....++++| +. .+++-...++|..-++...
T Consensus 346 -----~~~l~sg-~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--~~-~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 346 -----NKRIVSG-AYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFD--EF-QIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp -----SSEEEEE-ETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEEC--SS-CEEECCSSSEEEEEC----
T ss_pred -----CCEEEEE-eCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeC--CC-EEEEEeCCCEEEEEECCCC
Confidence 2334443 334788888875431110 0112222 22345578884 34 4456556888888888754
No 298
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=92.01 E-value=0.038 Score=47.50 Aligned_cols=38 Identities=24% Similarity=0.608 Sum_probs=27.2
Q ss_pred CCceee-c-ccCCC-CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCVD-A-DECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~d-~-~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
++.|++ + ++|.. ++.|.+.|.+..++|.|. +.||.+..
T Consensus 73 G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECT
T ss_pred eccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCC
Confidence 567986 6 89985 578999999999999999 99999754
No 299
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.99 E-value=1.8 Score=43.83 Aligned_cols=67 Identities=16% Similarity=0.233 Sum_probs=45.9
Q ss_pred CCCCceEEEEcCCCCeEEEEEcCCC-------------------CCcEEEEeCCCCCce-------eEEe----------
Q psy14258 170 NLSKPRGIALDPTSGYMFFTKWGAT-------------------RPMLERSLLDGTERF-------PMVT---------- 213 (440)
Q Consensus 170 ~~~~P~~iavd~~~g~lywtd~~~~-------------------~~~I~r~~~dG~~~~-------~l~~---------- 213 (440)
.+..|++|+++|.+|.+|++-.... .+.|+|...++.... .++.
T Consensus 382 ~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~ 461 (592)
T 3zwu_A 382 RMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGT 461 (592)
T ss_dssp CEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTS
T ss_pred EEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccc
Confidence 5678999999999999999964321 257999887643221 1110
Q ss_pred -----------cCccCceEEEEeCCCCEEEEEeCC
Q psy14258 214 -----------HKIVYPYGVTVDFPTKHVYWVDTY 237 (440)
Q Consensus 214 -----------~~~~~P~gl~vD~~~~~ly~~d~~ 237 (440)
..+..|-.|++|+ .++|+++...
T Consensus 462 ~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg 495 (592)
T 3zwu_A 462 PKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDG 495 (592)
T ss_dssp GGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECC
T ss_pred ccccccccCCCCCccCCcceEECC-CCCEEEEecC
Confidence 1256799999995 5668887643
No 300
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=91.97 E-value=0.076 Score=39.08 Aligned_cols=34 Identities=26% Similarity=0.608 Sum_probs=27.5
Q ss_pred eecccCCCCC-CC-CCCcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLIDG-SC-DQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~~~-~C-s~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+|++||.... .| .+.|.+++++|+|. ++||.+.+
T Consensus 1 ~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~ 37 (87)
T 1z6c_A 1 KDVDECSLKPSICGTAVCKNIPGDFECECPEGYRYNL 37 (87)
T ss_dssp CCSCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEET
T ss_pred CccccccCCCCCCCCCEeECCCCCEEEECCCCceECC
Confidence 3789998643 48 55899999999999 99998753
No 301
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=91.90 E-value=6.6 Score=35.05 Aligned_cols=271 Identities=7% Similarity=-0.032 Sum_probs=141.7
Q ss_pred eeeecCCcEEEe---ceEEEEecCCceEEEEEc--CCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEe
Q psy14258 139 RFPMVTHKIVYP---EAIYFCTHYMEHCMIAID--LNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVT 213 (440)
Q Consensus 139 avD~~~~~lY~~---~~I~~~~~dg~~~~~~~~--~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~ 213 (440)
.+||-.+++.-+ +.|.+-+++...+..++. .......++++.|...+|.-.... +.|...++..........
T Consensus 30 ~l~WS~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D---g~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 30 LVDWSSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS---AEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp CEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT---SEEEEEETTTTEEEEEEE
T ss_pred EEEECCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC---CcEEEeecCCceeEEEec
Confidence 688887775544 788888887555443333 223457899999954444433333 577777776543322222
Q ss_pred cCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEE-EecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCC
Q psy14258 214 HKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKT-IRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 214 ~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~-i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g 291 (440)
..-.....+..+ ...|..+. ..+.+............ ...+ .......+++..+ ....+-...+.|...+..++
T Consensus 107 ~h~~~~~~~~~~--~~~l~s~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 182 (318)
T 4ggc_A 107 SHSARVGSLSWN--SYILSSGS-RSGHIHHHDVRVAEHHVATLSG-HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 182 (318)
T ss_dssp CCSSCEEEEEEE--TTEEEEEE-TTSEEEEEETTSSSCEEEEEEC-CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCB
T ss_pred CccceEEEeecC--CCEEEEEe-cCCceEeeecCCCceeEEEEcC-ccCceEEEEEcCCCCEEEEEecCcceeEEECCCC
Confidence 222223333332 44444333 34444444443332222 1122 1233444554433 44455555677777776655
Q ss_pred CceE----EEecCCCC-eEEEEeccCCCCCCCCCceeEE-eecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEc
Q psy14258 292 DDYE----TIANFSRP-FAIHIYHRQKQPDALKPSTFLL-YAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHE 365 (440)
Q Consensus 292 ~~~~----~~~~~~~p-~~~~v~~~~~qp~~~~~~~~l~-~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~ 365 (440)
+... .......+ ..+... +.. ...+. .+....+.|+..+.... ..............+.+.+
T Consensus 183 ~~~~~~~~~~~~~~~~v~~~~~~-~~~-------~~~~~~~~~~~~~~i~lwd~~~~----~~~~~~~~~~~v~~~~~~~ 250 (318)
T 4ggc_A 183 EGGWVPLQTFTQHQGAVKAVAWC-PWQ-------SNVLATGGGTSDRHIRIWNVCSG----ACLSAVDAHSQVCSILWSP 250 (318)
T ss_dssp TTBSCCSEEECCCCSCEEEEEEC-TTS-------TTEEEEEECTTTCEEEEEETTTC----CEEEEEECSSCEEEEEEET
T ss_pred cccccceeeecccCCceEEEEec-CCC-------CcEEEEEecCCCCEEEEEecccc----cccccccceeeeeeeeecc
Confidence 4322 11111111 122211 111 12232 33333466766665544 2222223334567888999
Q ss_pred CCCEEEEEEC-CCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 366 KEEYIYYAEL-TSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 366 ~~~~vy~~d~-~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
.++.++.+.. ..+.|+..++........+...-+.+..|++.+.+..|. |-...++|.+-++.
T Consensus 251 ~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 251 HYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAAADETLRLWRCF 314 (318)
T ss_dssp TTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEETTTEEEEECCS
T ss_pred cccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEecCCeEEEEECC
Confidence 9998887753 578898888875444333343456789999988666554 44445677776653
No 302
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=91.58 E-value=0.046 Score=43.98 Aligned_cols=38 Identities=24% Similarity=0.608 Sum_probs=26.7
Q ss_pred CCceee-c-ccCCC-CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCVD-A-DECLI-DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~d-~-~~C~~-~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
++.|++ + ++|.. ++.|.+.|.+.+++|+|. +.||.+..
T Consensus 73 G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 73 GKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECT
T ss_pred CCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECC
Confidence 567987 6 88985 468999999999999999 99998753
No 303
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=91.23 E-value=3 Score=42.16 Aligned_cols=104 Identities=9% Similarity=0.019 Sum_probs=65.5
Q ss_pred ccccccce-eeeecCCcEEEe-------------------------ceEEEEecCCce------E-EEEE-c--------
Q psy14258 131 RSLLDGTE-RFPMVTHKIVYP-------------------------EAIYFCTHYMEH------C-MIAI-D-------- 168 (440)
Q Consensus 131 ~~~~~p~~-avD~~~~~lY~~-------------------------~~I~~~~~dg~~------~-~~~~-~-------- 168 (440)
..+..|++ ++++.++.+|++ ++|.+...++.. . ..++ .
T Consensus 381 T~f~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~ 460 (592)
T 3zwu_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred EEEeccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCcccccc
Confidence 45788999 999999999998 147777654321 0 1111 1
Q ss_pred ------------CCCCCceEEEEcCCCCeEEEEEcCCC----------CCcEEEEeCCCCCceeEEecC-ccCceEEEEe
Q psy14258 169 ------------LNLSKPRGIALDPTSGYMFFTKWGAT----------RPMLERSLLDGTERFPMVTHK-IVYPYGVTVD 225 (440)
Q Consensus 169 ------------~~~~~P~~iavd~~~g~lywtd~~~~----------~~~I~r~~~dG~~~~~l~~~~-~~~P~gl~vD 225 (440)
..+..|-.|++|| .|.||+.+-+.. +..++....+-.....++... -.-..|+++.
T Consensus 461 ~~~~~~~~~~~~~~f~~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fs 539 (592)
T 3zwu_A 461 TPKGGSSNITPQNMFNSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFS 539 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEEC
T ss_pred cccccccccCCCCCccCCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeEC
Confidence 1367899999999 688988875431 124555555433333333332 2346788888
Q ss_pred CCCCEEEEEe
Q psy14258 226 FPTKHVYWVD 235 (440)
Q Consensus 226 ~~~~~ly~~d 235 (440)
+....||+.-
T Consensus 540 pDg~tlfvni 549 (592)
T 3zwu_A 540 PDQKTLFVGI 549 (592)
T ss_dssp TTSSEEEEEE
T ss_pred CCCCEEEEEE
Confidence 7777777753
No 304
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=91.20 E-value=18 Score=38.62 Aligned_cols=192 Identities=8% Similarity=0.004 Sum_probs=104.8
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe---ceEEEEec
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTH 158 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~ 158 (440)
+.+++|++..+.|..... .+.|+....... +.. .....-..... ++.+ ++.|.-+ +.|.+-++
T Consensus 20 V~~lafspdg~~lAsgs~-Dg~I~lw~~~~~--~~~---------~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~ 86 (902)
T 2oaj_A 20 PIAAAFDFTQNLLAIATV-TGEVHIYGQQQV--EVV---------IKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSL 86 (902)
T ss_dssp EEEEEEETTTTEEEEEET-TSEEEEECSTTC--EEE---------EECSSCCCEEEEEEET-TTEEEEEETTCEEEEEET
T ss_pred cEEEEECCCCCEEEEEeC-CCEEEEEeCCCc--EEE---------EEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEEC
Confidence 899999998776655554 466654433221 110 01112223455 6666 4423333 68888888
Q ss_pred CCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEE-----------ecCccCceEEEEeCC
Q psy14258 159 YMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMV-----------THKIVYPYGVTVDFP 227 (440)
Q Consensus 159 dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~-----------~~~~~~P~gl~vD~~ 227 (440)
+...+...+. .-.....++++|...+|+..... +.|...++++....... .........+++++.
T Consensus 87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~d---g~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~ 162 (902)
T 2oaj_A 87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQN---GSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPR 162 (902)
T ss_dssp TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETT---SCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETT
T ss_pred CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCC---CcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccC
Confidence 7544332222 22568899999977777776654 58888888765432111 011234678888876
Q ss_pred CCEEEEEeCCCCcEEEEEccCCCcEEEecCC-----------------ccCceeeeeEecC-EEEEEecCCCeEEEEecc
Q psy14258 228 TKHVYWVDTYLDFIDRINYDGTDRKTIRKGF-----------------PVQNLYDITVFEN-NLFVTSWRNQSIIRVNKF 289 (440)
Q Consensus 228 ~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~-----------------~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~ 289 (440)
+..++.+-...+.| .-++............ .......+++..+ ..+.+-..++.|...+..
T Consensus 163 ~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 163 DIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp EEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 55555555556677 7776544332222210 0122456666544 444444455666666654
Q ss_pred CCC
Q psy14258 290 NSD 292 (440)
Q Consensus 290 ~g~ 292 (440)
+++
T Consensus 242 ~g~ 244 (902)
T 2oaj_A 242 SGH 244 (902)
T ss_dssp TCC
T ss_pred CCc
Confidence 443
No 305
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=90.85 E-value=0.082 Score=45.12 Aligned_cols=44 Identities=18% Similarity=0.474 Sum_probs=35.8
Q ss_pred ceecCCCCceeecccCCC---CCCCCC--CcccCC-----CceEEc-cCCeeeec
Q psy14258 2 TFRGPNKTQCVDADECLI---DGSCDQ--TCTNTH-----LSYTYT-DEGFSFQG 45 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~---~~~Cs~--~C~n~~-----~~~~C~-~~g~~l~~ 45 (440)
||.+.++.+|+++++|.. ...|.+ .|.+.. ++|+|. ..||.+..
T Consensus 32 G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~ 86 (186)
T 1z1y_A 32 GLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXE 86 (186)
T ss_dssp TEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEET
T ss_pred CCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCC
Confidence 566556678999999994 467875 799988 899999 99998753
No 306
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=90.46 E-value=11 Score=34.91 Aligned_cols=234 Identities=10% Similarity=-0.021 Sum_probs=122.2
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCc
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDR 251 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~ 251 (440)
.....+++.|. |.++.+-.. ..+...+++.. +.+..........+++.+..+.+.++-...+.|..-+......
T Consensus 20 ~~V~~v~fs~d-g~~la~g~~---~~~~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 20 NPVTDYEFNQD-QSCLILSTL---KSFEIYNVHPV--AHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp CCCCEEEECTT-SSEEEEECS---SEEEEEEETTE--EEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred CceEEEEECCC-CCEEEEEcC---CEEEEEecCCc--ceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 44667777774 444433322 13434443321 1111111112334555555666655555555676666543222
Q ss_pred EEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCC-CceEEEecCCCCeEEEEeccCCCCCCCCCceeEEee-cC
Q psy14258 252 KTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNS-DDYETIANFSRPFAIHIYHRQKQPDALKPSTFLLYA-KG 329 (440)
Q Consensus 252 ~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g-~~~~~~~~~~~p~~~~v~~~~~qp~~~~~~~~l~~~-~~ 329 (440)
...... -....++++..+.++.+. .+.|...+..++ +....+.. |.++..+.+ .+|.++ ..
T Consensus 94 ~~~~~~--~~~v~~v~~~~~~~~~~~--~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----------~~la~~sg~ 156 (355)
T 3vu4_A 94 VSRIKV--DAPVKDLFLSREFIVVSY--GDVISVFKFGNPWKRITDDIR---FGGVCEFSN----------GLLVYSNEF 156 (355)
T ss_dssp EEEEEC--SSCEEEEEECSSEEEEEE--TTEEEEEESSTTCCBSSCCEE---EEEEEEEET----------TEEEEEESS
T ss_pred EEEEEC--CCceEEEEEcCCEEEEEE--cCEEEEEECCCCceeeEEecc---CCceEEEEc----------cEEEEeCCC
Confidence 111121 224567777777666654 455666665544 32222222 455554432 345554 34
Q ss_pred CccEEEEEEcCCCCC-----Cce------e-eeeecC-CCCceEEEEEcCCCEEEEEECCCCe-EEEEecCCCCeEEEEE
Q psy14258 330 KPAIIKGLTFKRDGT-----TEQ------A-IMPITD-LKRPSVIDYHEKEEYIYYAELTSYV-IERRKMFGRGKEVVID 395 (440)
Q Consensus 330 ~~~~I~~i~~~~~~~-----~~~------~-~~~~~~-~~~p~~l~~d~~~~~vy~~d~~~~~-I~r~~~~g~~~~~~~~ 395 (440)
..+.|+..++..... ... . ...+.+ -....+++|++.+..+ .+-...++ |..-++........+.
T Consensus 157 ~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l-~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 157 NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMV-ATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp CTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEE-EEEETTCSEEEEEETTTCCEEEEEE
T ss_pred cCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEE-EEEeCCCCEEEEEECCCCcEEEEEE
Confidence 457888888765410 000 0 111222 2356799999976654 55556777 8888887543333333
Q ss_pred C--CCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 396 T--GIYNVEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 396 ~--~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
. .-..+..+++.+.+..|..+ ...++|.+.++..
T Consensus 236 ~g~h~~~v~~~~~s~~~~~l~s~-s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 236 RGLDRADVVDMKWSTDGSKLAVV-SDKWTLHVFEIFN 271 (355)
T ss_dssp CTTCCSCEEEEEECTTSCEEEEE-ETTCEEEEEESSC
T ss_pred cCCCCCcEEEEEECCCCCEEEEE-ECCCEEEEEEccC
Confidence 2 34678999999876655544 4568999999864
No 307
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=90.46 E-value=0.11 Score=36.67 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=25.7
Q ss_pred eecccCCC-CCCCCC--CcccCCCceEEc--cCCeeee
Q psy14258 12 VDADECLI-DGSCDQ--TCTNTHLSYTYT--DEGFSFQ 44 (440)
Q Consensus 12 ~d~~~C~~-~~~Cs~--~C~n~~~~~~C~--~~g~~l~ 44 (440)
+|+|||.. ...|.. .|.|++++|.|. ..||...
T Consensus 1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIND 38 (71)
T ss_dssp CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSC
T ss_pred CccccccCCCCCCCCCCEeECCCCCeEecccCCccccc
Confidence 47899985 457854 799999999998 5677653
No 308
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=90.39 E-value=0.12 Score=40.56 Aligned_cols=33 Identities=27% Similarity=0.575 Sum_probs=28.5
Q ss_pred eecccCCCCCCCCCCcccC-CCceEEc-cCCeeeec
Q psy14258 12 VDADECLIDGSCDQTCTNT-HLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~~~~Cs~~C~n~-~~~~~C~-~~g~~l~~ 45 (440)
+|+|||. ...|.+.|.+. +++|+|. ++||.+..
T Consensus 2 ~dideC~-~~pC~~~C~~~~~g~y~C~C~~Gy~g~~ 36 (118)
T 1dx5_I 2 EPVDPCF-RANCEYQCQPLDQTSYLCVCAEGFAPIP 36 (118)
T ss_dssp CCCCGGG-GCCCSSEEEECSSSCEEEECCTTEEEET
T ss_pred CccccCC-CCCCCCCCCCCCCCCEEeECCCCccccC
Confidence 4789996 47899999999 9999999 99998754
No 309
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=90.22 E-value=0.097 Score=43.53 Aligned_cols=34 Identities=32% Similarity=0.607 Sum_probs=28.3
Q ss_pred eecccCCCCCCC-CCCcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLIDGSC-DQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~~~~C-s~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+|+|||.....| .+.|.|++++|+|. ++||.+.+
T Consensus 1 ~dideC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~ 36 (162)
T 1uzk_A 1 TDVNECLDPTTCISGNCVNTPGSYICDCPPDFELNP 36 (162)
T ss_dssp CCCCGGGSTTSSBTSEEEEETTEEEEECCTTCEECT
T ss_pred CccccCCCCCCCCCCEeECCCCCEEEeCCCCCeECC
Confidence 478999865677 46899999999999 99999753
No 310
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=89.92 E-value=14 Score=35.45 Aligned_cols=138 Identities=9% Similarity=-0.085 Sum_probs=82.0
Q ss_pred ccce-eeeecCCcEEE---e----ceEEEEecCCc------eE-----EEEEcCCCCCceEEEEcCCCCeEEEEEcCCCC
Q psy14258 135 DGTE-RFPMVTHKIVY---P----EAIYFCTHYME------HC-----MIAIDLNLSKPRGIALDPTSGYMFFTKWGATR 195 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~---~----~~I~~~~~dg~------~~-----~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~ 195 (440)
.+.. ++.+.++.|++ + +.|.+.++... .. ..+.......+.+++..|..+.++.+-...
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D-- 171 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD-- 171 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT--
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC--
Confidence 3666 77777877876 4 57777776432 10 111111235688999999767777665443
Q ss_pred CcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccC-----ceeeeeEec
Q psy14258 196 PMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQ-----NLYDITVFE 270 (440)
Q Consensus 196 ~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~-----~p~gl~~~~ 270 (440)
+.|...++............-..+..+++.+.+..|+.+. ..+.|...+..+.....+....... ...+++..+
T Consensus 172 g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 172 GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGK-QNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEE-TTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEc-CCCcEEEEccCCcccccccCCcccCCCCceeEEEEEEec
Confidence 5788877765422111111134678999998877777765 5678888888865444443221111 345666666
Q ss_pred CEEEE
Q psy14258 271 NNLFV 275 (440)
Q Consensus 271 ~~ly~ 275 (440)
+..|.
T Consensus 251 ~~~~l 255 (434)
T 2oit_A 251 TYVFA 255 (434)
T ss_dssp TTEEE
T ss_pred CceEE
Confidence 64444
No 311
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=89.65 E-value=0.16 Score=40.74 Aligned_cols=34 Identities=29% Similarity=0.626 Sum_probs=28.3
Q ss_pred ceeecccCCC-CCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 10 QCVDADECLI-DGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 10 ~C~d~~~C~~-~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
+|+|++||.. ...|.+ .|.+..++|+|. ++||..
T Consensus 1 Sc~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G 38 (135)
T 2vj3_A 1 SAQDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTG 38 (135)
T ss_dssp --CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEES
T ss_pred CCcccccccCCCCCCCCCCEeECCCCCEEEECCCCCcC
Confidence 5899999985 468987 799999999999 999975
No 312
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=89.21 E-value=0.16 Score=41.22 Aligned_cols=38 Identities=24% Similarity=0.571 Sum_probs=31.0
Q ss_pred CCceee-cccC---C-CCCCCCCCcccCCC-ceEEc-cCCeeeec
Q psy14258 8 KTQCVD-ADEC---L-IDGSCDQTCTNTHL-SYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~d-~~~C---~-~~~~Cs~~C~n~~~-~~~C~-~~g~~l~~ 45 (440)
++.|++ +++| . .++.|+|.|.++.+ +|+|. +.||.+..
T Consensus 78 G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~ 122 (142)
T 2c4f_L 78 GRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLA 122 (142)
T ss_dssp STTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECT
T ss_pred CCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECC
Confidence 567986 6775 3 36789999999999 99999 99998753
No 313
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.19 E-value=20 Score=36.02 Aligned_cols=67 Identities=6% Similarity=-0.069 Sum_probs=43.6
Q ss_pred CCEEEEEeCCCCcEEEEEc--cCCCcEEEecCCc---c------CceeeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 228 TKHVYWVDTYLDFIDRINY--DGTDRKTIRKGFP---V------QNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 228 ~~~ly~~d~~~~~i~~~~~--dG~~~~~i~~~~~---~------~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+++||++....+.+..++. +|..+-....... . ....++++.++.||+... .+.|+.++..+|+..=
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-NGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC-CCEEEEEECCCCCEEE
Confidence 7788888653567888887 4544333221110 0 012467889999999864 6789999998887654
No 314
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=88.88 E-value=0.3 Score=32.32 Aligned_cols=36 Identities=17% Similarity=0.206 Sum_probs=24.6
Q ss_pred Ccee-ecccCCCCCCCCC--Cc-----ccCCCceEEc-cCCeeeec
Q psy14258 9 TQCV-DADECLIDGSCDQ--TC-----TNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 9 ~~C~-d~~~C~~~~~Cs~--~C-----~n~~~~~~C~-~~g~~l~~ 45 (440)
.+|+ ++|||.. ..|.+ .| .+..++|+|. +.||....
T Consensus 2 ~~c~~~~~eC~s-~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~ 46 (55)
T 3u7u_G 2 TSHLVKCAEKEK-TFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDR 46 (55)
T ss_dssp -CCEEECCSTTT-TTSCTTCEEEEECCC--CCCEEEEECTTEESTT
T ss_pred CCCcccCCCCcC-CCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCC
Confidence 4577 7899885 45555 56 3567899999 99998643
No 315
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=87.79 E-value=0.11 Score=47.12 Aligned_cols=34 Identities=12% Similarity=0.379 Sum_probs=25.0
Q ss_pred eecccCCC-CCCCCC--CcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLI-DGSCDQ--TCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~-~~~Cs~--~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+|+|||.. .+.|+. .|.|++|+|.|. ..||....
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG 40 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNG 40 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECS
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCC
Confidence 57899984 468975 599999999999 99998543
No 316
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=87.66 E-value=0.38 Score=48.93 Aligned_cols=42 Identities=29% Similarity=0.524 Sum_probs=33.7
Q ss_pred ceecCCCCceeecccCCC-CCCCCC-----CcccCCCceEEc--cCCeeee
Q psy14258 2 TFRGPNKTQCVDADECLI-DGSCDQ-----TCTNTHLSYTYT--DEGFSFQ 44 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~C~~-~~~Cs~-----~C~n~~~~~~C~--~~g~~l~ 44 (440)
||. .++++|++++||.. ++.|.+ .|.|+.++|+|. +.||...
T Consensus 33 Gyt-Gdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 33 GFL-GNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp TBC-SCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred ccC-CCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 454 35578999999985 456987 799999999996 8899864
No 317
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=87.58 E-value=0.22 Score=30.13 Aligned_cols=30 Identities=30% Similarity=0.529 Sum_probs=23.5
Q ss_pred ecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 13 DADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 13 d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
|+++|.. ..|.+ .|.+..++|+|. +.||..
T Consensus 2 d~d~C~~-~pC~ngg~C~~~~~~~~C~C~~G~~G 34 (39)
T 1edm_B 2 DGDQCES-NPCLNGGSCKDDINSYECWCPFGFEG 34 (39)
T ss_dssp CCCTTTT-CCCCTTCEEEEETTEEEEECCTTCCS
T ss_pred ccccCCC-CCCCCCCEeEcCCCceEeECCCCCcC
Confidence 5678874 45765 688899999999 999864
No 318
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=85.86 E-value=20 Score=32.59 Aligned_cols=156 Identities=8% Similarity=-0.017 Sum_probs=88.0
Q ss_pred CceEEEEeC--CCCEEEEEeCCCCcEEEEEccCCCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCce
Q psy14258 218 YPYGVTVDF--PTKHVYWVDTYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDY 294 (440)
Q Consensus 218 ~P~gl~vD~--~~~~ly~~d~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~ 294 (440)
....+++++ .+..|..+ ...+.|...++.......+.....-.....+++..+ .++.+-..++.|...+..+++..
T Consensus 127 ~v~~~~~~~~~~~~~l~s~-s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWA-DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CEEEEECCC---CCEEEEE-ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred CEEEEEcCCCCCCCEEEEE-eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 466788876 45554444 456788888887655543333211223567777765 55555566788888888777765
Q ss_pred -EEEec--CCCCeEEEEeccCCCCCCCCCc-eeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCc---eEEEEEcCC
Q psy14258 295 -ETIAN--FSRPFAIHIYHRQKQPDALKPS-TFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRP---SVIDYHEKE 367 (440)
Q Consensus 295 -~~~~~--~~~p~~~~v~~~~~qp~~~~~~-~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p---~~l~~d~~~ 367 (440)
..+.. ......+.+. |+ .+|+.+.. +.|+..++... .......+...-..+ ..++|++.+
T Consensus 206 ~~~~~~~h~~~v~~l~fs----------~~g~~l~s~~~--~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 206 SSRFPVDEEAKIKEVKFA----------DNGYWMVVECD--QTVVCFDLRKD-VGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp CEECCCCTTSCEEEEEEC----------TTSSEEEEEES--SBEEEEETTSS-TTCBSSCCCBC-----CCEEEEECTTS
T ss_pred ccEEeccCCCCEEEEEEe----------CCCCEEEEEeC--CeEEEEEcCCC-CcceeecccccccccccceEEEECCCC
Confidence 44433 2233444433 34 34555443 48888888665 111001110000011 469999998
Q ss_pred CEEEEEECCCCeEEEEecCC
Q psy14258 368 EYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 368 ~~vy~~d~~~~~I~r~~~~g 387 (440)
.++..+....+.|...+++.
T Consensus 273 ~~l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp SEEEEEETTTTEEEEEEECT
T ss_pred CEEEEecCCCCcEEEEEEcc
Confidence 87777655477777777654
No 319
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=85.74 E-value=0.36 Score=39.33 Aligned_cols=34 Identities=32% Similarity=0.522 Sum_probs=23.4
Q ss_pred CceeecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 9 TQCVDADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 9 ~~C~d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
..|.|+|+|.. ..|.+ .|.+.+++|.|. +.||..
T Consensus 43 ~~c~dideC~~-~pC~n~g~C~~~~~~y~C~C~~G~~G 79 (146)
T 1x7a_L 43 KQYVDGDQCEP-NPCLNGGLCKDDINSYECWCQVGFEG 79 (146)
T ss_dssp -------CCSS-CSSCTTCEEEECSSCEEEECCSSEES
T ss_pred ccCCCcCcCCC-CCCCCCCEeECCCCCEEEecCCCCcC
Confidence 47999999985 56876 899999999999 999974
No 320
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=84.73 E-value=1.7 Score=38.01 Aligned_cols=68 Identities=10% Similarity=-0.047 Sum_probs=51.4
Q ss_pred CCCceEEEEEcCCCEEEEEECCCCeEEEEecCC-------CCeEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEE
Q psy14258 355 LKRPSVIDYHEKEEYIYYAELTSYVIERRKMFG-------RGKEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAK 427 (440)
Q Consensus 355 ~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g-------~~~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~ 427 (440)
..+...++|+| ++.||-. ..+.+++.++.. ...+.+-..+......+.+|. .++||.+. .+.|.+.+
T Consensus 40 w~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~-~G~LYav~--dG~iyr~~ 113 (236)
T 1tl2_A 40 WSNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDP-NGYLYAVS--KDKLYKAS 113 (236)
T ss_dssp CTTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECT-TSCEEEEE--TTEEEEES
T ss_pred cccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECC-CCCEEEeC--CCEEEEeC
Confidence 56777999999 7779998 678899999843 123445455667789999995 77899993 38888776
Q ss_pred e
Q psy14258 428 I 428 (440)
Q Consensus 428 ~ 428 (440)
.
T Consensus 114 p 114 (236)
T 1tl2_A 114 P 114 (236)
T ss_dssp C
T ss_pred C
Confidence 5
No 321
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=84.68 E-value=0.64 Score=31.22 Aligned_cols=27 Identities=19% Similarity=0.300 Sum_probs=21.4
Q ss_pred ceec-CCCCceeecccCCCCCCCCCCcccCCC
Q psy14258 2 TFRG-PNKTQCVDADECLIDGSCDQTCTNTHL 32 (440)
Q Consensus 2 ~~~~-~~~~~C~d~~~C~~~~~Cs~~C~n~~~ 32 (440)
||++ .|+++|.|+++ ..|+|.|.|...
T Consensus 28 Gy~L~~D~~tC~d~~~----~pC~~~c~n~~~ 55 (59)
T 2wph_E 28 GYRLAENQKSCEPAVP----FPCGRVSVSQTS 55 (59)
T ss_dssp TEEECTTSSCEEESSS----SCTTCCCSCCCS
T ss_pred CcEECCCCCcccCCCC----CCCCCccccccc
Confidence 6775 89999999754 579999988643
No 322
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=84.02 E-value=0.21 Score=33.92 Aligned_cols=32 Identities=22% Similarity=0.577 Sum_probs=25.2
Q ss_pred ceeecccCCCCCCCCC----CcccCCCceEEc-cCCee
Q psy14258 10 QCVDADECLIDGSCDQ----TCTNTHLSYTYT-DEGFS 42 (440)
Q Consensus 10 ~C~d~~~C~~~~~Cs~----~C~n~~~~~~C~-~~g~~ 42 (440)
.|.++++|.. ..|.+ .|.+..++|.|. ++||.
T Consensus 7 ~~~~~d~C~s-nPC~nga~gtC~~~~g~y~C~C~~Gy~ 43 (61)
T 2k2s_B 7 LSETPAACSS-NPCGPEAAGTCKETNSGYICRCNQGYR 43 (61)
T ss_dssp CTTSCCHHHH-CSSCSSSCCEEEECSSEEEEECCTTEE
T ss_pred hcCCCCcCcC-CCCcCCCccccccCCCceEeECCCCCc
Confidence 3667778864 34654 589999999999 99998
No 323
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=82.91 E-value=0.41 Score=38.90 Aligned_cols=33 Identities=24% Similarity=0.464 Sum_probs=27.6
Q ss_pred eecccCCCCCCCCC-CcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLIDGSCDQ-TCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~~~~Cs~-~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+|+|||.. ..|.+ .|.|++++|+|. +.||.+..
T Consensus 2 ~dideC~~-~pC~ng~C~n~~g~y~C~C~~G~~g~~ 36 (147)
T 2w86_A 2 ADIDECES-SPCINGVCKNSPGSFICECSSESTLDP 36 (147)
T ss_dssp CCCCGGGG-CCSBTSEEEEETTEEEEECCTTEEECT
T ss_pred CcCccCcC-CCCCCCEeECCCCCEEeECCCCcccCC
Confidence 37889986 46875 899999999999 99998754
No 324
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=82.62 E-value=0.77 Score=29.98 Aligned_cols=32 Identities=28% Similarity=0.433 Sum_probs=24.3
Q ss_pred ecccCCCC--CCCCC--Ccc--cCCCceEEc-cCCeeee
Q psy14258 13 DADECLID--GSCDQ--TCT--NTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 13 d~~~C~~~--~~Cs~--~C~--n~~~~~~C~-~~g~~l~ 44 (440)
|+++|... ..|.+ .|. +..++|.|. ++||...
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~ 40 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD 40 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC
Confidence 56778753 46776 687 788999999 9999753
No 325
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=82.14 E-value=0.75 Score=46.79 Aligned_cols=37 Identities=19% Similarity=0.440 Sum_probs=31.9
Q ss_pred CCCceeecccCCC-CCCCC--CCcccCC----CceEEc-cCCeee
Q psy14258 7 NKTQCVDADECLI-DGSCD--QTCTNTH----LSYTYT-DEGFSF 43 (440)
Q Consensus 7 ~~~~C~d~~~C~~-~~~Cs--~~C~n~~----~~~~C~-~~g~~l 43 (440)
++++|++++||.. ++.|. ..|.+++ ++|+|. ++||..
T Consensus 95 dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G 139 (634)
T 1yo8_A 95 EKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG 139 (634)
T ss_dssp CCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred CCCcccccccccCCCcccccCccccccccccccceeeeccCCccc
Confidence 5678999999996 47897 4899988 999999 999986
No 326
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=81.97 E-value=32 Score=31.80 Aligned_cols=196 Identities=7% Similarity=-0.050 Sum_probs=101.7
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-CCC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-GTD 250 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G~~ 250 (440)
..++.+++.|...+|..+....+ ..|...++........+. .-.....+++.+.+..|..+. .+.+..++.. |..
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d-~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s--~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVP-AIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYIT--GSSLEVISTVTGSC 209 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSS-CEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEEC--SSCEEEEETTTCCE
T ss_pred cCEEEEEEcCCCCEEEEEECCCC-CEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEecc--ceeEEEEEeccCcc
Confidence 34778999996556666554333 577777776433322222 223467899988777776653 4556666643 333
Q ss_pred cEEEecCCccCceeeeeEecC-EEEEE-ecCCC---eEEEEeccCCCceE----EEecCC-CCeEEEEeccCCCCCCCCC
Q psy14258 251 RKTIRKGFPVQNLYDITVFEN-NLFVT-SWRNQ---SIIRVNKFNSDDYE----TIANFS-RPFAIHIYHRQKQPDALKP 320 (440)
Q Consensus 251 ~~~i~~~~~~~~p~gl~~~~~-~ly~t-d~~~~---~i~~~~~~~g~~~~----~~~~~~-~p~~~~v~~~~~qp~~~~~ 320 (440)
.........-.....+++..+ ..+.+ ..... .++..+...+.... .+..-. ....+.+. |
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~S----------p 279 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVD----------M 279 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEEC----------T
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEEC----------C
Confidence 222222111223456666544 33333 22211 23333433222211 111111 12333332 4
Q ss_pred ceeEEeecCCccEEEEEEcCCCCCCceeeeee-cC-CCCceEEEEEcCCCEEEEEECCCCeEEEEecC
Q psy14258 321 STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPI-TD-LKRPSVIDYHEKEEYIYYAELTSYVIERRKMF 386 (440)
Q Consensus 321 ~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~-~~-~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~ 386 (440)
++.++++-+..+.|+..++... .....+ .+ -....+|+|.|++.+ ..+-...++|+..++.
T Consensus 280 dg~~lasgs~D~~V~iwd~~~~----~~~~~~~~gH~~~V~~v~fSpdg~~-laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVKLKDL----SMSKIFKQAHSFAITEVTISPDSTY-VASVSAANTIHIIKLP 342 (365)
T ss_dssp TSCEEEEEETTSCEEEEETTTT----EEEEEETTSSSSCEEEEEECTTSCE-EEEEETTSEEEEEECC
T ss_pred CCCceEEEcCCCEEEEEECCCC----cEEEEecCcccCCEEEEEECCCCCE-EEEEeCCCeEEEEEcC
Confidence 4444444344578888887654 222222 22 335679999997664 4666678888888874
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=81.24 E-value=53 Score=33.88 Aligned_cols=228 Identities=9% Similarity=-0.019 Sum_probs=118.1
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeEEec-C--ccCceEEEEeCCCCEEEEEeCCCCcEEEEEccC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPMVTH-K--IVYPYGVTVDFPTKHVYWVDTYLDFIDRINYDG 248 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~-~--~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG 248 (440)
....+|+-|. .|+|++.... .+.|. ||...+..... . -.....|..| ..++||+... +-+.+.+...
T Consensus 22 n~V~~I~qD~-~G~lWigT~~----GL~ry--DG~~~~~~~~~~~~~~~~i~~i~~d-~~g~lWigT~--~Gl~~yd~~~ 91 (758)
T 3ott_A 22 SVVSCFLQDS-EGLIWIGSNK----GLFSY--DGYSTQQHFTYGENNNTRIYCGVII-DNTYLYMGTD--NGILVYNYRA 91 (758)
T ss_dssp CCEEEEEECT-TSCEEEEESS----CEEEE--CSSCEEECSCTTSTTSSCEEEEEEE-TTTEEEEEET--TEEEEEETTT
T ss_pred ceEEEEEECC-CCCEEEEECC----Ccccc--CCCceEEEEccCCCCCceEEEEEEc-CCCcEEEEeC--CCeEEEeCCC
Confidence 4578899998 7999997743 56665 45443222111 1 1234567778 6778888753 3577766543
Q ss_pred CCcEEEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCceEEEe---cCC--CCeEEEEeccCCCCCCCCCcee
Q psy14258 249 TDRKTIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYETIA---NFS--RPFAIHIYHRQKQPDALKPSTF 323 (440)
Q Consensus 249 ~~~~~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~~~~---~~~--~p~~~~v~~~~~qp~~~~~~~~ 323 (440)
..... ...........+...++.||+... +.+++++..+++...... .+. ....+... .++.
T Consensus 92 ~~f~~-~~~~~~~~i~~i~~~~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d----------~~g~ 158 (758)
T 3ott_A 92 DRYEQ-PETDFPTDVRTMALQGDTLWLGAL--NGLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRT----------KDNQ 158 (758)
T ss_dssp TEECC-CSCCCCSCEEEEEEETTEEEEEET--TEEEEEETTTCCEEEECHHHHCCSCSCEEEEEEC----------TTCC
T ss_pred CEEEC-cccCCCceEEEEEecCCcEEEEcC--CcceeEeCCCCeEEEeccCCCCcCCCeEEEEEEc----------CCCC
Confidence 21111 111001123345555678888754 378888875544322211 111 11122111 2456
Q ss_pred EEeecCCccEEEEEEcCCCCCCceeeeeec-CC--CCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEECCCCC
Q psy14258 324 LLYAKGKPAIIKGLTFKRDGTTEQAIMPIT-DL--KRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDTGIYN 400 (440)
Q Consensus 324 l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~-~~--~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~~~~~ 400 (440)
|+++.. +.+.+++.... .......+.. .+ ....++..|..++.|++.. . +-+++.++.....+.+....-..
T Consensus 159 lWigt~--~Gl~~~~~~~~-~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt-~-~Gl~~~~~~~~~~~~~~~l~~~~ 233 (758)
T 3ott_A 159 IYVGTY--NGLCRYIPSNG-KFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGT-E-GYLFQYFPSTGQIKQTEAFHNNS 233 (758)
T ss_dssp EEEEET--TEEEEEETTTT-EEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEE-E-EEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEEeC--CCHhhCccCCC-ceEEecCCCccccccceeEEEEEECCCCEEEEEE-C-CCCeEEcCCCCeEEeccCCCCCe
Confidence 666654 45766665443 1100011110 01 1245787887777677765 2 46888887654322221111134
Q ss_pred eeeEEEecCCCcEEEEeCCCCeEEEEEeCC
Q psy14258 401 VEGMAVDWMANNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 401 ~~glAvD~~~~~lYwtd~~~~~I~~~~~~g 430 (440)
+..|+.|. .++||+... +.+.+++...
T Consensus 234 i~~i~~d~-~g~lWigT~--~Gl~~~~~~~ 260 (758)
T 3ott_A 234 IKSLALDG-NGDLLAGTD--NGLYVYHNDT 260 (758)
T ss_dssp EEEEEECT-TCCEEEEET--TEEEEECCTT
T ss_pred EEEEEEcC-CCCEEEEeC--CceeEEecCC
Confidence 67788884 566777652 3566666554
No 328
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.12 E-value=52 Score=33.67 Aligned_cols=16 Identities=6% Similarity=0.389 Sum_probs=13.4
Q ss_pred eEEEEEcCCCEEEEEE
Q psy14258 359 SVIDYHEKEEYIYYAE 374 (440)
Q Consensus 359 ~~l~~d~~~~~vy~~d 374 (440)
.+++||+.++.+|+..
T Consensus 396 ~~~a~dp~~~~~yv~~ 411 (677)
T 1kb0_A 396 HPMSFNPQTGLVYLPA 411 (677)
T ss_dssp SCCEEETTTTEEEEEE
T ss_pred CCceEcCCCCEEEEeC
Confidence 3689999999999864
No 329
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=80.05 E-value=0.7 Score=37.17 Aligned_cols=37 Identities=22% Similarity=0.555 Sum_probs=30.4
Q ss_pred CCcee-ecccCCCCCCCCC--CcccCCCceEEc-cCCeeeec
Q psy14258 8 KTQCV-DADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 8 ~~~C~-d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+..|+ ++++|.. ..|.. .|.+..++|+|. ++||....
T Consensus 90 G~~C~~~i~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 90 GIHCQHNINECEV-EPCKNGGICTDLVANYSCECPGEFMGRN 130 (143)
T ss_dssp STTSCEECCTTTT-CCSCTTCEEEEETTEEEEECCTTCBSTT
T ss_pred CCCcccCCCcCCC-CCCCCCCEeECCCCCeEeECCCCCccCC
Confidence 56798 9999985 45654 899999999999 99998754
No 330
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=79.55 E-value=0.83 Score=29.84 Aligned_cols=18 Identities=11% Similarity=0.172 Sum_probs=15.4
Q ss_pred ceec-CCCCceeecccCCC
Q psy14258 2 TFRG-PNKTQCVDADECLI 19 (440)
Q Consensus 2 ~~~~-~~~~~C~d~~~C~~ 19 (440)
||++ .|+++|+|++||.-
T Consensus 28 Gy~L~~Dg~tC~d~dec~c 46 (53)
T 2bz6_L 28 GYSLLADGVSCTPTVEYPC 46 (53)
T ss_dssp TEEECTTSSCEEECSSSCT
T ss_pred CCEECCCCCcccCCccccC
Confidence 6775 88999999999964
No 331
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=79.51 E-value=31 Score=30.06 Aligned_cols=107 Identities=14% Similarity=0.077 Sum_probs=64.9
Q ss_pred cCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCC-------CCceeEEecCccCceEEEEeCCCCEEEEEeCCCCc
Q psy14258 168 DLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDG-------TERFPMVTHKIVYPYGVTVDFPTKHVYWVDTYLDF 240 (440)
Q Consensus 168 ~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG-------~~~~~l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~ 240 (440)
..+..+.+.||++| +|.||-.. . +.+++.++.. ...+.|-......-..+.+| .++.||.+ ..+.
T Consensus 37 ~~gw~~~~~laf~P-~G~LYaV~-~---G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD-~~G~LYav--~dG~ 108 (236)
T 1tl2_A 37 KGGWSNFKFLFLSP-GGELYGVL-N---DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFD-PNGYLYAV--SKDK 108 (236)
T ss_dssp SSSCTTCSEEEECT-TSCEEEEE-T---TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEEC-TTSCEEEE--ETTE
T ss_pred ccccccceeEEECC-CccEEEEe-C---CeEEEECCCCCCcccccccccEecccccccceEEEEC-CCCCEEEe--CCCE
Confidence 33466788999999 89999982 2 5899988732 11233333222224578999 78899998 3389
Q ss_pred EEEEEc--cCCCc-----EEEecCCccCceeeeeEecC-EEEEEecCCCeEEE
Q psy14258 241 IDRINY--DGTDR-----KTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIR 285 (440)
Q Consensus 241 i~~~~~--dG~~~-----~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~ 285 (440)
|++++. ++... .+|-.. .-..-..|.+..+ .||-.. ++.+++
T Consensus 109 iyr~~pP~~~~~~Wl~~a~~vg~~-gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 109 LYKASPPQSDTDNWIARATEVGSG-GWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp EEEESCCCSTTCCHHHHSEEEECS-SGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred EEEeCCCcCCCCceeccccEeccC-CCCceEEEEECCCceEEEEe--CCcEEe
Confidence 999986 33321 223221 1234455555544 777666 455554
No 332
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=79.37 E-value=0.38 Score=41.22 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=0.0
Q ss_pred CceeecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 9 TQCVDADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 9 ~~C~d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
..|.|+++|.. ..|.+ .|.+..++|.|. +.||..
T Consensus 37 ~~c~dideC~~-~pC~ngg~C~n~~g~y~C~C~~Gf~G 73 (195)
T 1nfu_B 37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEG 73 (195)
T ss_dssp --------------------------------------
T ss_pred ccCCCCcccCC-CCCCCCCEeECCCCCeeEeCCCCcee
Confidence 46999999995 56887 899999999999 999974
No 333
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=77.78 E-value=0.94 Score=34.93 Aligned_cols=35 Identities=29% Similarity=0.560 Sum_probs=21.4
Q ss_pred ceeecccCCCCC---C----CCC--CcccCCCceEEc-cCCeeee
Q psy14258 10 QCVDADECLIDG---S----CDQ--TCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 10 ~C~d~~~C~~~~---~----Cs~--~C~n~~~~~~C~-~~g~~l~ 44 (440)
.|.|++||..+. . |.. .|.+..++|+|. +.||...
T Consensus 2 ~~~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~ 46 (114)
T 1aut_L 2 KHVDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGR 46 (114)
T ss_dssp ------CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEEST
T ss_pred cceecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCC
Confidence 477889998643 2 333 577788999999 9999754
No 334
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=77.51 E-value=61 Score=32.36 Aligned_cols=75 Identities=15% Similarity=-0.071 Sum_probs=43.6
Q ss_pred EEEEeCCCCEEEEEeCC---------------CCcEEEEEccCCCcEEEec-CC-------ccCceeeeeE--ecC--EE
Q psy14258 221 GVTVDFPTKHVYWVDTY---------------LDFIDRINYDGTDRKTIRK-GF-------PVQNLYDITV--FEN--NL 273 (440)
Q Consensus 221 gl~vD~~~~~ly~~d~~---------------~~~i~~~~~dG~~~~~i~~-~~-------~~~~p~gl~~--~~~--~l 273 (440)
.+++|+..+.||+.... .+.|..++.+......-.+ .. ....|.-+.. .+. .+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~ 318 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPL 318 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEE
Confidence 47899889999998642 1358888876544433332 10 1123432221 222 34
Q ss_pred EEEecCCCeEEEEeccCCCceE
Q psy14258 274 FVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 274 y~td~~~~~i~~~~~~~g~~~~ 295 (440)
++.-..++.++.+++.+|+..-
T Consensus 319 v~~~~~~G~l~~lD~~tG~~~w 340 (571)
T 2ad6_A 319 LSHIDRNGILYTLNRENGNLIV 340 (571)
T ss_dssp EEEECTTSEEEEEETTTCCEEE
T ss_pred EEEeCCCcEEEEEECCCCCEEe
Confidence 4444457789999988886543
No 335
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=77.41 E-value=38 Score=29.99 Aligned_cols=201 Identities=10% Similarity=0.021 Sum_probs=107.2
Q ss_pred CceEEEEeCCCCEEEEEeCCCCcEEEEEccCC---CcEEEecCCccCceeeeeEec---CEEEEEecCCCeEEEEeccCC
Q psy14258 218 YPYGVTVDFPTKHVYWVDTYLDFIDRINYDGT---DRKTIRKGFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNS 291 (440)
Q Consensus 218 ~P~gl~vD~~~~~ly~~d~~~~~i~~~~~dG~---~~~~i~~~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g 291 (440)
....+++++.+.+|.-+. ..+.|...++.+. ...++... -.....+++.. +.+..+-...+.|..-+..++
T Consensus 11 ~V~~~~~s~~g~~las~s-~D~~v~iw~~~~~~~~~~~~l~gH--~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~ 87 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCS-SDKTIKIFEVEGETHKLIDTLTGH--EGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENG 87 (297)
T ss_dssp CEEEEEECTTSSEEEEEE-TTSCEEEEEBCSSCBCCCEEECCC--SSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSS
T ss_pred ceEEEEECCCCCEEEEEe-CCCEEEEEecCCCCcEEEEEEccc--cCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCC
Confidence 346788887666665553 4567777777543 22333221 22345677642 455556556777777776655
Q ss_pred Cc--eEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCC-
Q psy14258 292 DD--YETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKE- 367 (440)
Q Consensus 292 ~~--~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~- 367 (440)
+. ...+..-. ....+.+. |.. .+.++++-+..+.|+..++....... .............++|.+..
T Consensus 88 ~~~~~~~~~~h~~~v~~v~~~-p~~-------~g~~l~s~s~d~~v~~wd~~~~~~~~-~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 88 RWSQIAVHAVHSASVNSVQWA-PHE-------YGPMLLVASSDGKVSVVEFKENGTTS-PIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp CBCCCEEECCCSSCEEEEEEC-CGG-------GCSEEEEEETTSEEEEEEBCSSSCBC-CEEEECCSSCEEEEEECCCC-
T ss_pred ceEEEEEeecCCCceeEEEeC-cCC-------CCcEEEEEECCCcEEEEEecCCCcee-eeeeecccCccceEeecCCcc
Confidence 32 22222211 22333332 110 12233333334788888876541111 11111122245577887752
Q ss_pred -----------CEEEEEECCCCeEEEEecCCCCe----EEEEECCCCCeeeEEEecCC--CcEEEEeCCCCeEEEEEeCC
Q psy14258 368 -----------EYIYYAELTSYVIERRKMFGRGK----EVVIDTGIYNVEGMAVDWMA--NNLYWTDAGIGTINVAKISD 430 (440)
Q Consensus 368 -----------~~vy~~d~~~~~I~r~~~~g~~~----~~~~~~~~~~~~glAvD~~~--~~lYwtd~~~~~I~~~~~~g 430 (440)
+.++++-...++|+--+++.... ...+...-..+..+++.+.+ +.+..+-...++|.+.+++.
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 34556666678888777764331 11222334568889998764 45666666678899988875
No 336
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=76.87 E-value=0.6 Score=37.72 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=28.8
Q ss_pred CceeecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 9 TQCVDADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 9 ~~C~d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
..|.|+++|.. ..|.+ .|.+..++|.|. +.||..
T Consensus 42 ~~c~did~C~~-~pC~n~g~C~~~~g~y~C~C~~G~~G 78 (142)
T 2c4f_L 42 ISYSDGDQCAS-SPCQNGGSCKDQLQSYICFCLPAFEG 78 (142)
T ss_dssp HHHTTCCGGGG-CCCCTTCEEEEETTEEEEECCTTEES
T ss_pred ccCCccCcCcC-CCcCCCCEEeCCCCCEEeeCCCCccC
Confidence 35889999985 56887 799999999999 999974
No 337
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=74.49 E-value=69 Score=31.53 Aligned_cols=265 Identities=13% Similarity=-0.011 Sum_probs=128.0
Q ss_pred ceEEEEecCCceEE-----------EEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCC-CceeEEecCccC
Q psy14258 151 EAIYFCTHYMEHCM-----------IAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT-ERFPMVTHKIVY 218 (440)
Q Consensus 151 ~~I~~~~~dg~~~~-----------~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~-~~~~l~~~~~~~ 218 (440)
+.|.+-++...... ..+........+++..+ .+.|.-.... +.|...++... .....+...-..
T Consensus 235 gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~lasgs~D---gtV~lWD~~~~~~~~~~~~~H~~~ 310 (524)
T 2j04_B 235 GTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTVVCGFKN---GFVAEFDLTDPEVPSFYDQVHDSY 310 (524)
T ss_dssp SCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEEEEEETT---SEEEEEETTBCSSCSEEEECSSSC
T ss_pred CeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeEEEEeCC---CEEEEEECCCCCCceEEeeccccc
Confidence 57777777643211 11222234567888876 3555554443 58888888743 222223322234
Q ss_pred ceEEEEe-CCCC-EEEEEeCCCCcEEEEEccC-CCcEEEecCCccCceeeeeEecC-EEEEEecCCCeEEEEeccCCCce
Q psy14258 219 PYGVTVD-FPTK-HVYWVDTYLDFIDRINYDG-TDRKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQSIIRVNKFNSDDY 294 (440)
Q Consensus 219 P~gl~vD-~~~~-~ly~~d~~~~~i~~~~~dG-~~~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~i~~~~~~~g~~~ 294 (440)
...++.. ...+ .++.+-...+.|..-++.. ....++...........+++..+ ..+.+-...+.|...+..++...
T Consensus 311 V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~ 390 (524)
T 2j04_B 311 ILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAV 390 (524)
T ss_dssp EEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCC
T ss_pred EEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccc
Confidence 5566322 2333 6666666667787777643 22222221100112456777763 45566555677777777666654
Q ss_pred EEEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeee-eecCCCCceEEEEEcCCCEEEE
Q psy14258 295 ETIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIM-PITDLKRPSVIDYHEKEEYIYY 372 (440)
Q Consensus 295 ~~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~-~~~~~~~p~~l~~d~~~~~vy~ 372 (440)
..+.+ ......+++. |++-++++-+..+.|+..++........... ..........++|++.++ +|-
T Consensus 391 ~~l~gH~~~V~sva~S----------p~g~~l~Sgs~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~~~ 459 (524)
T 2j04_B 391 HPLVSRETTITAIGVS----------RLHPMVLAGSADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDD-KYR 459 (524)
T ss_dssp EEEEECSSCEEEEECC----------SSCCBCEEEETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSC-EEE
T ss_pred eeeecCCCceEEEEeC----------CCCCeEEEEECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCC-eEE
Confidence 44433 2234455432 2322333333346776666543310100000 000000123667777666 332
Q ss_pred EECCCCeEEEEecCCCCeEEEEECCCCCeeeEEEecCC--CcEEEEeCCCCeEEEEEeCCCe
Q psy14258 373 AELTSYVIERRKMFGRGKEVVIDTGIYNVEGMAVDWMA--NNLYWTDAGIGTINVAKISDFS 432 (440)
Q Consensus 373 ~d~~~~~I~r~~~~g~~~~~~~~~~~~~~~glAvD~~~--~~lYwtd~~~~~I~~~~~~g~~ 432 (440)
.+. ...+...+..|....++ ...-..+..+|+++.+ +.+.-+-...+.|.+-+++|++
T Consensus 460 ~~~-~~~~~~~~~~g~~~~~l-~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 460 IDS-SYEVYPLTVNDVSKAKI-DAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp ECC-CCCCCC--------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred ccC-CceecccccCCcceeee-cCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 221 11222222223222222 2233567889999875 3477777778999999999953
No 338
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=74.27 E-value=1.4 Score=28.38 Aligned_cols=19 Identities=11% Similarity=0.231 Sum_probs=15.5
Q ss_pred Cceec-CCCCceeecccCCC
Q psy14258 1 MTFRG-PNKTQCVDADECLI 19 (440)
Q Consensus 1 ~~~~~-~~~~~C~d~~~C~~ 19 (440)
.||++ .|+++|+|++||.-
T Consensus 25 ~Gy~L~~d~~tC~dide~pC 44 (51)
T 1kig_L 25 HGYVLGDDSKSCVSTERFPC 44 (51)
T ss_dssp TTEEECTTSSCEEECSSSCT
T ss_pred CCcEECCCCCccccCCcccC
Confidence 36775 88999999999863
No 339
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=73.21 E-value=51 Score=29.46 Aligned_cols=113 Identities=5% Similarity=-0.131 Sum_probs=62.0
Q ss_pred ccce-eeeecCCcEEEe---ceEEEEecCCceE--EEEEcCCCCCceEEEEcCC-CCeEEEEEcCCCCCcEEEEeCCCCC
Q psy14258 135 DGTE-RFPMVTHKIVYP---EAIYFCTHYMEHC--MIAIDLNLSKPRGIALDPT-SGYMFFTKWGATRPMLERSLLDGTE 207 (440)
Q Consensus 135 ~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~--~~~~~~~~~~P~~iavd~~-~g~lywtd~~~~~~~I~r~~~dG~~ 207 (440)
.... ++++.++.|.-+ +.|.+.++..... ...+........+++..+. .|.++.+-... +.|...++....
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D--~~v~iWd~~~~~ 92 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD--RKVIIWREENGT 92 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT--SCEEEECCSSSC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC--CEEEEEECCCCc
Confidence 3456 777666644443 6787777764332 1222334456788888653 35555544332 467777765432
Q ss_pred ceeE--EecCccCceEEEEeCCC-CEEEEEeCCCCcEEEEEccCC
Q psy14258 208 RFPM--VTHKIVYPYGVTVDFPT-KHVYWVDTYLDFIDRINYDGT 249 (440)
Q Consensus 208 ~~~l--~~~~~~~P~gl~vD~~~-~~ly~~d~~~~~i~~~~~dG~ 249 (440)
...+ +...-...+.+++.+.. +.++.+-...+.|...++.+.
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 1111 11223346788888653 455555555667777776554
No 340
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=71.84 E-value=0.79 Score=36.57 Aligned_cols=34 Identities=32% Similarity=0.595 Sum_probs=0.0
Q ss_pred CceeecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 9 TQCVDADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 9 ~~C~d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
..|.|+++|.. ..|.+ .|.+..++|.|. +.||..
T Consensus 37 ~~c~d~d~C~~-~pC~n~g~C~~~~~~y~C~C~~G~~G 73 (134)
T 2vh0_B 37 NKYKDGDQCET-SPCQNQGKCKDGLGEYTCTCLEGFEG 73 (134)
T ss_dssp --------------------------------------
T ss_pred ccCCCcCcCCC-CCCCCcCCcccCCCCEEeeCCCCccC
Confidence 46999999985 46877 899999999999 999874
No 341
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=71.52 E-value=58 Score=29.33 Aligned_cols=223 Identities=7% Similarity=-0.023 Sum_probs=102.4
Q ss_pred eEEEecCCCcee--eee--ecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccc
Q psy14258 62 FGPMDIEEWDEG--LSF--LTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT 137 (440)
Q Consensus 62 I~~~~l~~~~~~--~~~--~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~ 137 (440)
|+..++...... ..+ ..+...+.+++|++..+.|.-. ...+.|+..++........ .......+...-....
T Consensus 36 i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~-s~D~~v~iw~~~~~~~~~~---~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 36 IKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAG-SFDSTVSIWAKEESADRTF---EMDLLAIIEGHENEVK 111 (330)
T ss_dssp EEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEE-ETTSCEEEEEC-------C---CCEEEEEEC----CEE
T ss_pred EEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEE-eCCCcEEEEEcccCcCccc---cceeEEEEcCCCCcEE
Confidence 777777653322 112 1123348999999986655444 4446665555432110000 0000011222233455
Q ss_pred e-eeeecCCcEEEe---ceEEEEecC-C-c--eEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce
Q psy14258 138 E-RFPMVTHKIVYP---EAIYFCTHY-M-E--HCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF 209 (440)
Q Consensus 138 ~-avD~~~~~lY~~---~~I~~~~~d-g-~--~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~ 209 (440)
. ++.+.++.|.-+ +.|.+.+++ + . .+...+.........++..|....|.-.... +.|...++.....+
T Consensus 112 ~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D---~~i~iW~~~~~~~~ 188 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD---DTVRIWKDYDDDWE 188 (330)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT---SCEEEEEEETTEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC---CeEEEEECCCCCee
Confidence 5 666665544433 678888874 2 1 2222333344568899999954444433333 35555554322111
Q ss_pred --eEEecCccCceEEEEeCCC-CEEEEEeCCCCcEEEEEccCCC---c---EEE--ecCCccCceeeeeEecCEEEEEec
Q psy14258 210 --PMVTHKIVYPYGVTVDFPT-KHVYWVDTYLDFIDRINYDGTD---R---KTI--RKGFPVQNLYDITVFENNLFVTSW 278 (440)
Q Consensus 210 --~l~~~~~~~P~gl~vD~~~-~~ly~~d~~~~~i~~~~~dG~~---~---~~i--~~~~~~~~p~gl~~~~~~ly~td~ 278 (440)
..+...-.....+++++.. +.+..+-...+.|..-++.+.. . ..+ ..+........+++..+.++.+-.
T Consensus 189 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~ 268 (330)
T 2hes_X 189 CVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVG 268 (330)
T ss_dssp EEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEE
T ss_pred EEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEe
Confidence 1122223345678887653 2333333344556555543221 0 111 111112234566665444444544
Q ss_pred CCCeEEEEeccCC
Q psy14258 279 RNQSIIRVNKFNS 291 (440)
Q Consensus 279 ~~~~i~~~~~~~g 291 (440)
..+.|...+..++
T Consensus 269 ~dg~v~iw~~~~~ 281 (330)
T 2hes_X 269 ADGVLAVYEEVDG 281 (330)
T ss_dssp TTSCEEEEEEETT
T ss_pred CCCEEEEEEcCCC
Confidence 5666665555444
No 342
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=70.28 E-value=65 Score=29.42 Aligned_cols=221 Identities=9% Similarity=0.066 Sum_probs=114.0
Q ss_pred EEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce-eeeecCCcEEEe----ceEEEEe
Q psy14258 83 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE-RFPMVTHKIVYP----EAIYFCT 157 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~-avD~~~~~lY~~----~~I~~~~ 157 (440)
+.+++|++.+..|.....+ .+...+++.. .. ........... ++.+.++.+.++ +.|.+-+
T Consensus 22 V~~v~fs~dg~~la~g~~~--~~~iw~~~~~--~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd 87 (355)
T 3vu4_A 22 VTDYEFNQDQSCLILSTLK--SFEIYNVHPV--AH----------IMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWD 87 (355)
T ss_dssp CCEEEECTTSSEEEEECSS--EEEEEEETTE--EE----------EEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEE
T ss_pred eEEEEECCCCCEEEEEcCC--EEEEEecCCc--ce----------eeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEE
Confidence 7888888876655544332 2332232211 11 01112223333 555555555454 4788888
Q ss_pred cCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCC-CceeEEecCccCceEE-EEeCCCCEEEEE-
Q psy14258 158 HYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGT-ERFPMVTHKIVYPYGV-TVDFPTKHVYWV- 234 (440)
Q Consensus 158 ~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~-~~~~l~~~~~~~P~gl-~vD~~~~~ly~~- 234 (440)
.....+...+. .-....++++++ ..++.+. . ..|...++... .....+.. |.++ ++.+ ..|.++
T Consensus 88 ~~~~~~~~~~~-~~~~v~~v~~~~--~~~~~~~-~---~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~la~~s 154 (355)
T 3vu4_A 88 DVKKQDVSRIK-VDAPVKDLFLSR--EFIVVSY-G---DVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLLVYSN 154 (355)
T ss_dssp TTTTEEEEEEE-CSSCEEEEEECS--SEEEEEE-T---TEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEEEEEE
T ss_pred CCCCcEEEEEE-CCCceEEEEEcC--CEEEEEE-c---CEEEEEECCCCceeeEEecc----CCceEEEEc--cEEEEeC
Confidence 76544433222 224677888876 3444443 2 47888887654 21111111 4443 3432 555554
Q ss_pred eCCCCcEEEEEccCCC-----------------cEEEecCCccCceeeeeEecC-EEEEEecCCCe-EEEEeccCCCceE
Q psy14258 235 DTYLDFIDRINYDGTD-----------------RKTIRKGFPVQNLYDITVFEN-NLFVTSWRNQS-IIRVNKFNSDDYE 295 (440)
Q Consensus 235 d~~~~~i~~~~~dG~~-----------------~~~i~~~~~~~~p~gl~~~~~-~ly~td~~~~~-i~~~~~~~g~~~~ 295 (440)
....+.|...++.... ...+... ......+++..+ .+..+-...+. |...+..+++...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h--~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH--TNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCC--SSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc--CCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 4456677777765432 2222221 234567787655 55566566776 8777887777666
Q ss_pred EEe-c-CC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCC
Q psy14258 296 TIA-N-FS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRD 342 (440)
Q Consensus 296 ~~~-~-~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~ 342 (440)
.+. + -. ....+.+. |++.++++-+..+.|+..++...
T Consensus 233 ~~~~g~h~~~v~~~~~s----------~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWS----------TDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEECTTCCSCEEEEEEC----------TTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEcCCCCCcEEEEEEC----------CCCCEEEEEECCCEEEEEEccCC
Confidence 554 2 22 23344433 34334444444578888887654
No 343
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=69.39 E-value=2.1 Score=28.02 Aligned_cols=19 Identities=11% Similarity=0.174 Sum_probs=15.6
Q ss_pred Cceec-CCCCceeecccCCC
Q psy14258 1 MTFRG-PNKTQCVDADECLI 19 (440)
Q Consensus 1 ~~~~~-~~~~~C~d~~~C~~ 19 (440)
.||++ .|+++|+|++||..
T Consensus 28 ~Gy~L~~d~~~C~didec~c 47 (55)
T 2jkh_L 28 RGYTLADNGKACIPTGPYPC 47 (55)
T ss_dssp TTEEECTTSSCEEESSSSCT
T ss_pred CCCEECCCCCeeccCccccC
Confidence 36775 88999999999874
No 344
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=69.36 E-value=65 Score=29.06 Aligned_cols=155 Identities=8% Similarity=0.049 Sum_probs=84.2
Q ss_pred eeeeeEec--C-EEEEEecCCCeEEEEeccCCCceEEEec-CC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEE
Q psy14258 263 LYDITVFE--N-NLFVTSWRNQSIIRVNKFNSDDYETIAN-FS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGL 337 (440)
Q Consensus 263 p~gl~~~~--~-~ly~td~~~~~i~~~~~~~g~~~~~~~~-~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i 337 (440)
...+++.. + .++.+-...+.|...+..+++...+... .. ....+.+. |++.++++-+..+.|+..
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~----------pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH----------KDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC----------TTSCEEEEECTTSCEEEE
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC----------CCCCEEEEEcCCCEEEEE
Confidence 34455443 2 4444444567777777766655433321 11 23334332 344455543445889888
Q ss_pred EcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEEC---CCCCe--eeEEEecCCCc
Q psy14258 338 TFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVIDT---GIYNV--EGMAVDWMANN 412 (440)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~~---~~~~~--~glAvD~~~~~ 412 (440)
++... ......+....-.....++|.+.+..|..+. .+.|..-++........+.. ..... ..+++++.++.
T Consensus 198 d~~~~-~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 198 NLSSP-DQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN 274 (343)
T ss_dssp ESSCT-TSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE
T ss_pred ECCCC-CCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCE
Confidence 88765 2110122221234567999999888777666 34888888865322110110 00111 35999987776
Q ss_pred EEEEeCCCCeEEEEEeCC
Q psy14258 413 LYWTDAGIGTINVAKISD 430 (440)
Q Consensus 413 lYwtd~~~~~I~~~~~~g 430 (440)
|.....+.+.|.+.+++.
T Consensus 275 l~~~s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 275 MIAYSNESNSLTIYKFDK 292 (343)
T ss_dssp EEEEETTTTEEEEEEECT
T ss_pred EEEecCCCCcEEEEEEcc
Confidence 666555467899988754
No 345
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=68.82 E-value=66 Score=28.92 Aligned_cols=275 Identities=8% Similarity=0.047 Sum_probs=130.8
Q ss_pred eeeecCCcEEEe----ceEEEEecCCce--EEEEE-cC-CCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCC---
Q psy14258 139 RFPMVTHKIVYP----EAIYFCTHYMEH--CMIAI-DL-NLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE--- 207 (440)
Q Consensus 139 avD~~~~~lY~~----~~I~~~~~dg~~--~~~~~-~~-~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~--- 207 (440)
++++..+ +..+ +.|.+.++.... ....+ .. ......++++.|...+|.-.... +.|...+++...
T Consensus 19 ~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D---~~v~iw~~~~~~~~~ 94 (330)
T 2hes_X 19 SFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD---STVSIWAKEESADRT 94 (330)
T ss_dssp EEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT---SCEEEEEC-------
T ss_pred eeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC---CcEEEEEcccCcCcc
Confidence 4555444 4444 678888776532 22222 22 33567899999964444444433 467666664321
Q ss_pred --cee--EEecCccCceEEEEeCCCCEEEEEeCCCCcEEEEEcc-C-CCcEEE--ecCCccCceeeeeEecC-EEEEEec
Q psy14258 208 --RFP--MVTHKIVYPYGVTVDFPTKHVYWVDTYLDFIDRINYD-G-TDRKTI--RKGFPVQNLYDITVFEN-NLFVTSW 278 (440)
Q Consensus 208 --~~~--l~~~~~~~P~gl~vD~~~~~ly~~d~~~~~i~~~~~d-G-~~~~~i--~~~~~~~~p~gl~~~~~-~ly~td~ 278 (440)
... .+...-.....+++.+.+..|.-+. ..+.|..-+++ + ...+.+ ..+ .......+++..+ .++.+-.
T Consensus 95 ~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s-~D~~v~iwd~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 95 FEMDLLAIIEGHENEVKGVAWSNDGYYLATCS-RDKSVWIWETDESGEEYECISVLQE-HSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp CCCEEEEEEC----CEEEEEECTTSCEEEEEE-TTSCEEEEECCTTCCCCEEEEEECC-CSSCEEEEEECSSSSEEEEEE
T ss_pred ccceeEEEEcCCCCcEEEEEECCCCCEEEEEe-CCCEEEEEeccCCCCCeEEEEEecc-CCCceEEEEECCCCCEEEEEc
Confidence 111 1112233467889987766665554 45677777763 2 222222 222 1234566776644 4555555
Q ss_pred CCCeEEEEeccCCC--ceEEEecCC-CCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCC-Cce---eeee
Q psy14258 279 RNQSIIRVNKFNSD--DYETIANFS-RPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGT-TEQ---AIMP 351 (440)
Q Consensus 279 ~~~~i~~~~~~~g~--~~~~~~~~~-~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~-~~~---~~~~ 351 (440)
..+.|...+..++. ....+..-. ....+.+. +.. ...++++-+..+.|+..++..... ... ....
T Consensus 173 ~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~-~~~-------~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~ 244 (330)
T 2hes_X 173 YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFD-KTE-------GVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAI 244 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC-CSS-------SSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEec-CCC-------CeeEEEEEeCCCeEEEEEecCCCccccceeEEeee
Confidence 56666655544432 122232211 22333322 110 133444434446777666643311 000 1111
Q ss_pred ec--CCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCeEEEEE---CCCC-CeeeEEEecC-CCcEEEEeCCCCeEE
Q psy14258 352 IT--DLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGKEVVID---TGIY-NVEGMAVDWM-ANNLYWTDAGIGTIN 424 (440)
Q Consensus 352 ~~--~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~~~~~~---~~~~-~~~glAvD~~-~~~lYwtd~~~~~I~ 424 (440)
+. .-.....+++.+ ++ ++.+-...++|+..+......+.+.. ..-. .+..+++.+. .+++..+-...++|.
T Consensus 245 ~~~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~ 322 (330)
T 2hes_X 245 LPDVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVN 322 (330)
T ss_dssp CCSCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEE
T ss_pred cccccccceEEEEEcC-CC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEE
Confidence 11 122456888874 44 34454567788777765432222221 1112 4667777653 344555555567787
Q ss_pred EEEeC
Q psy14258 425 VAKIS 429 (440)
Q Consensus 425 ~~~~~ 429 (440)
+-++.
T Consensus 323 ~W~~~ 327 (330)
T 2hes_X 323 FWSLE 327 (330)
T ss_dssp EEEC-
T ss_pred EEEec
Confidence 77765
No 346
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=67.83 E-value=1e+02 Score=30.77 Aligned_cols=15 Identities=13% Similarity=-0.011 Sum_probs=12.7
Q ss_pred EEEEeCCCCEEEEEe
Q psy14258 221 GVTVDFPTKHVYWVD 235 (440)
Q Consensus 221 gl~vD~~~~~ly~~d 235 (440)
++++|+.++.+|+..
T Consensus 416 ~~a~dp~~g~~yv~~ 430 (582)
T 1flg_A 416 PMAYSQDTGLFYVPA 430 (582)
T ss_dssp CCEECTTTCCEEEEE
T ss_pred CceECCCCCEEEEec
Confidence 679999999999864
No 347
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=67.65 E-value=98 Score=30.43 Aligned_cols=232 Identities=6% Similarity=-0.074 Sum_probs=114.4
Q ss_pred CCeEEEEEcCCCCCcEEEEeCCCCCce----eEEecCccCceEEEEeCC-----CCEEEEEeCCCCcEEEEEccCCCcE-
Q psy14258 183 SGYMFFTKWGATRPMLERSLLDGTERF----PMVTHKIVYPYGVTVDFP-----TKHVYWVDTYLDFIDRINYDGTDRK- 252 (440)
Q Consensus 183 ~g~lywtd~~~~~~~I~r~~~dG~~~~----~l~~~~~~~P~gl~vD~~-----~~~ly~~d~~~~~i~~~~~dG~~~~- 252 (440)
.+.+|.+.... +.|...++++.... ..+.........+++.+. .+.+..+-...+.|..-++......
T Consensus 172 ~~~~laS~s~D--~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 172 HLEMFDKEKHS--SCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ----------C--EEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred hhhhhccCCCC--ceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 35555443332 45555555543321 111112234667787764 1234444445566777776543210
Q ss_pred ----------EEecCCccCceeeeeEecCEEEEEecCCCeEEEEeccCCCce-EEEec-CCCCeEEEEeccCCCCCCCCC
Q psy14258 253 ----------TIRKGFPVQNLYDITVFENNLFVTSWRNQSIIRVNKFNSDDY-ETIAN-FSRPFAIHIYHRQKQPDALKP 320 (440)
Q Consensus 253 ----------~i~~~~~~~~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~-~~~~~-~~~p~~~~v~~~~~qp~~~~~ 320 (440)
....+. -....++++..+....+-..++.|...+..++... ..+.. ......+.... .+
T Consensus 250 ~~~~~~~~p~~~l~~h-~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~--------s~ 320 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLA-DSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAY--------SD 320 (524)
T ss_dssp SEEECCCSCSEEECCT-TTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEEC--------CT
T ss_pred ccceeecCceEEEEcC-CCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEc--------CC
Confidence 011110 12345677655544555556788888887655332 23322 22334453221 12
Q ss_pred ce-eEEeecCCccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecCCCCe-EEEEECCC
Q psy14258 321 ST-FLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMFGRGK-EVVIDTGI 398 (440)
Q Consensus 321 ~~-~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~g~~~-~~~~~~~~ 398 (440)
++ .++++-+..+.|+..++... ........-........++|.|.++. +.+-...++|.-.++..... .++.. .-
T Consensus 321 ~g~~~laS~S~D~tvklWD~~~~-~~~~~~~~~~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~l~g-H~ 397 (524)
T 2j04_B 321 FEDTVVSTVAVDGYFYIFNPKDI-ATTKTTVSRFRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHPLVS-RE 397 (524)
T ss_dssp TSCCEEEEEETTSEEEEECGGGH-HHHCEEEEECSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEEEEE-CS
T ss_pred CCCeEEEEeccCCeEEEEECCCC-CcccccccccccCcccceEeCCCcCe-EEEeCCCCcEEEEECcccccceeeec-CC
Confidence 33 56666566688888887543 11000000011112457999997664 56666677888888765332 33333 55
Q ss_pred CCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 399 YNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 399 ~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
+.+..||+.+.+..| .+-...++|.+.++.
T Consensus 398 ~~V~sva~Sp~g~~l-~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 398 TTITAIGVSRLHPMV-LAGSADGSLIITNAA 427 (524)
T ss_dssp SCEEEEECCSSCCBC-EEEETTTEEECCBSC
T ss_pred CceEEEEeCCCCCeE-EEEECCCEEEEEech
Confidence 678889998766544 444445667665543
No 348
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=66.62 E-value=2.6 Score=29.22 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=15.8
Q ss_pred Cceec-CCCCceeecccCCC
Q psy14258 1 MTFRG-PNKTQCVDADECLI 19 (440)
Q Consensus 1 ~~~~~-~~~~~C~d~~~C~~ 19 (440)
.||++ .|+++|.|++||..
T Consensus 33 ~Gy~L~~D~~tC~d~dec~C 52 (69)
T 1kli_L 33 EGYSLLADGVSCTPTVEYPC 52 (69)
T ss_dssp TTEEECTTSSCEEECSSSCT
T ss_pred CCCeECCCCCcccCcccccC
Confidence 36876 89999999999864
No 349
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=63.44 E-value=97 Score=28.89 Aligned_cols=261 Identities=7% Similarity=-0.096 Sum_probs=135.4
Q ss_pred eEEEEeecccceeeeEEEecCCCcee--eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccc
Q psy14258 48 THLYETIEAFWEECFGPMDIEEWDEG--LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT 125 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~~~~~--~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 125 (440)
.|.++-++. |+..++...... +........+.+++|.+.++.|.... ..+.|...++.... .+
T Consensus 118 ~lAvgld~t-----V~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-~Dg~v~iWd~~~~~--~~------- 182 (420)
T 4gga_A 118 VLAVALDNS-----VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-SSAEVQLWDVQQQK--RL------- 182 (420)
T ss_dssp EEEEEETTE-----EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-TTSCEEEEETTTTE--EE-------
T ss_pred EEEEEeCCE-----EEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-CCCeEEEEEcCCCc--EE-------
Confidence 344555555 777777654443 33333333489999999866665544 44666655543221 11
Q ss_pred cceeeccccccce-eeeecCCcEEEe---ceEEEEecCCceEE-EEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEE
Q psy14258 126 RPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEHCM-IAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLER 200 (440)
Q Consensus 126 ~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~~~-~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r 200 (440)
.........- ++.|.+..|... ..+...+....... ..+........++...|. |..+.+-... +.|..
T Consensus 183 ---~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~-g~~l~s~~~D--~~v~i 256 (420)
T 4gga_A 183 ---RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGND--NLVNV 256 (420)
T ss_dssp ---EEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETT--SCEEE
T ss_pred ---EEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCC-CCeeeeeecc--ccceE
Confidence 1111223334 777766644433 56777766543322 223345567888888885 4444444333 46666
Q ss_pred EeCCCCCc-e---eEEecCccCceEEEEeCCCCEEEEEeC--CCCcEEEEEccCCCcEEEecCCccCceeeeeEec--CE
Q psy14258 201 SLLDGTER-F---PMVTHKIVYPYGVTVDFPTKHVYWVDT--YLDFIDRINYDGTDRKTIRKGFPVQNLYDITVFE--NN 272 (440)
Q Consensus 201 ~~~dG~~~-~---~l~~~~~~~P~gl~vD~~~~~ly~~d~--~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~~--~~ 272 (440)
.+...... . ............+++.+....++.+-. ..+.|...++........... -..+..+.+.. +.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~--~~~v~~~~~~~~~~~ 334 (420)
T 4gga_A 257 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKE 334 (420)
T ss_dssp EESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEEC--SSCEEEEEEETTTTE
T ss_pred EeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeecc--ccceeeeeecCCCCe
Confidence 66643221 1 111122334567788777766665432 345677777654333222221 22345555543 35
Q ss_pred EEEEec-CCCeEEEEeccCCCceEEEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCC
Q psy14258 273 LFVTSW-RNQSIIRVNKFNSDDYETIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKR 341 (440)
Q Consensus 273 ly~td~-~~~~i~~~~~~~g~~~~~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~ 341 (440)
++.+.. ..+.|...+..+++....+.+ ......+++. |++.++++-+..+.|+..++..
T Consensus 335 lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~s----------pdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 335 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS----------PDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC----------TTSSCEEEEETTTEEEEECCSC
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc----------CCCCEEEEEecCCeEEEEECCC
Confidence 655543 457777777766666555543 2233444433 3433444444446777666543
No 350
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=63.38 E-value=79 Score=27.83 Aligned_cols=252 Identities=8% Similarity=-0.047 Sum_probs=124.7
Q ss_pred CCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce--eEEecCccCceEEEEeCC-CCEEEEEeCCCCcEEEEEcc
Q psy14258 171 LSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF--PMVTHKIVYPYGVTVDFP-TKHVYWVDTYLDFIDRINYD 247 (440)
Q Consensus 171 ~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~--~l~~~~~~~P~gl~vD~~-~~~ly~~d~~~~~i~~~~~d 247 (440)
......++++|...+|.-.... +.|...++++...+ ..+..--.....+++.+. .++++.+-...+.|..-++.
T Consensus 9 ~~~V~~~~~s~~g~~las~s~D---~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~ 85 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCSSD---KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEE 85 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEETT---SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBS
T ss_pred cCceEEEEECCCCCEEEEEeCC---CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcC
Confidence 3456789999854444444433 47777777653221 112222234566777543 24444444456677777765
Q ss_pred CCC---cEEEecCCccCceeeeeEec---CEEEEEecCCCeEEEEeccCCCc--eEEEecCC-CCeEEEEeccCCCC-CC
Q psy14258 248 GTD---RKTIRKGFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNSDD--YETIANFS-RPFAIHIYHRQKQP-DA 317 (440)
Q Consensus 248 G~~---~~~i~~~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g~~--~~~~~~~~-~p~~~~v~~~~~qp-~~ 317 (440)
... ...+ .+ .......+++.. +.++.+-...+.|...+..++.. ...+..-. ....+. ++|.... ..
T Consensus 86 ~~~~~~~~~~-~~-h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~-~~p~~~~~~~ 162 (297)
T 2pm7_B 86 NGRWSQIAVH-AV-HSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSAS-WAPATIEEDG 162 (297)
T ss_dssp SSCBCCCEEE-CC-CSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEE-ECCCC-----
T ss_pred CCceEEEEEe-ec-CCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEe-ecCCcccccc
Confidence 432 1222 11 122345666653 33444444567777666554432 12222211 122232 2221100 00
Q ss_pred C---CCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC-CCCceEEEEEcCC--CEEEEEECCCCeEEEEecCCCC--
Q psy14258 318 L---KPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD-LKRPSVIDYHEKE--EYIYYAELTSYVIERRKMFGRG-- 389 (440)
Q Consensus 318 ~---~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~-~~~p~~l~~d~~~--~~vy~~d~~~~~I~r~~~~g~~-- 389 (440)
. .+++.++++-+..+.|+..++............+.+ -....+++|.|.+ +.++.+-...++|..-+++...
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~ 242 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGP 242 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSC
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCc
Confidence 0 001223444344477887777654111111222332 2345789999875 4566666678888888876532
Q ss_pred -eEEEEE-CC-CCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 390 -KEVVID-TG-IYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 390 -~~~~~~-~~-~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
...++. .+ -..+..+++.+.+..|.-+ ...++|.+.+.+
T Consensus 243 ~~~~~~~~~~~~~~v~~~~~s~~g~~las~-~~D~~v~lw~~~ 284 (297)
T 2pm7_B 243 WKKTLLKEEKFPDVLWRASWSLSGNVLALS-GGDNKVTLWKEN 284 (297)
T ss_dssp CEEEESSSSCCSSCEEEEEECSSSCCEEEE-ETTSCEEEEEEC
T ss_pred cceeeeecccCCCcEEEEEECCCCCEEEEE-cCCCcEEEEEEC
Confidence 222221 11 2456788998877655544 445678887765
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.01 E-value=1e+02 Score=28.65 Aligned_cols=186 Identities=10% Similarity=-0.061 Sum_probs=93.5
Q ss_pred eEEEEeecccceeeeEEEecCC--Ccee-eeeecccceEEEEEeee-cccEEEEEEcCCC---CceeEEeCCCCCcceee
Q psy14258 48 THLYETIEAFWEECFGPMDIEE--WDEG-LSFLTFAQEAIYFCTHY-MEHCMIAIDLNLS---KPRGIALDPTSGYMFFT 120 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~--~~~~-~~~~~~~~~~~~i~~d~-~~~~ly~~d~~~~---~I~~~~~~~~~~~~~~~ 120 (440)
.|++..... +.+...+. ..-+ .........+.+|++|+ ..+.||..-...+ .|++..=.|..-+.+.
T Consensus 24 ~l~vgt~~G-----l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~- 97 (394)
T 3b7f_A 24 MLLVATIKG-----AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEAT- 97 (394)
T ss_dssp EEEEEETTE-----EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECS-
T ss_pred EEEEEecCc-----eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECC-
Confidence 455555556 66555432 2222 11112223389999998 3466777654321 4555322222211110
Q ss_pred ccccccceeec--------cccccce-eeeec--CCcEEEe---ceEEEEecCCceEEEEEcC-----------------
Q psy14258 121 KWGATRPMLER--------SLLDGTE-RFPMV--THKIVYP---EAIYFCTHYMEHCMIAIDL----------------- 169 (440)
Q Consensus 121 ~~~~~~v~~~~--------~~~~p~~-avD~~--~~~lY~~---~~I~~~~~dg~~~~~~~~~----------------- 169 (440)
.. ..+.. ......+ ++|+. .+.||.. +.|.+.+-.|..=+.+...
T Consensus 98 ---~~-~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~ 173 (394)
T 3b7f_A 98 ---RP-PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGT 173 (394)
T ss_dssp ---BC-CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----
T ss_pred ---cc-ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCC
Confidence 00 00000 1123456 77764 5678775 6788776666543333110
Q ss_pred -CCCCceEEEEcCC-CCeEEEEEcCCCCCcEEEEeCCCCCceeEEec--C--c--------cCceEEEEeCCC-CEEEEE
Q psy14258 170 -NLSKPRGIALDPT-SGYMFFTKWGATRPMLERSLLDGTERFPMVTH--K--I--------VYPYGVTVDFPT-KHVYWV 234 (440)
Q Consensus 170 -~~~~P~~iavd~~-~g~lywtd~~~~~~~I~r~~~dG~~~~~l~~~--~--~--------~~P~gl~vD~~~-~~ly~~ 234 (440)
.......|++||. .+.||+.... ..|.+..-.|..-+.+... . + .....|++|+.+ +.||..
T Consensus 174 ~~~~~i~~i~~d~~~~~~l~vg~~~---ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg 250 (394)
T 3b7f_A 174 PDGPKMHSILVDPRDPKHLYIGMSS---GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQ 250 (394)
T ss_dssp CCCCEEEEEEECTTCTTCEEEEEET---BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEE
T ss_pred CCCCceeEEEECCCCCCEEEEEECC---CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEE
Confidence 0112358999985 4678887644 3688776556443333210 0 0 135678998753 677776
Q ss_pred eCCCCcEEEEEccC
Q psy14258 235 DTYLDFIDRINYDG 248 (440)
Q Consensus 235 d~~~~~i~~~~~dG 248 (440)
.. +.|.+.+-.|
T Consensus 251 ~~--~gl~~s~D~G 262 (394)
T 3b7f_A 251 NH--CGIYRMDRRE 262 (394)
T ss_dssp ET--TEEEEEETTT
T ss_pred cC--CeEEEeCCCC
Confidence 43 3466655334
No 352
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=60.69 E-value=4.9 Score=31.75 Aligned_cols=35 Identities=23% Similarity=0.585 Sum_probs=22.3
Q ss_pred Ccee-ecccCCCCCCCCC--CcccCCCceEEc-cCCeeee
Q psy14258 9 TQCV-DADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSFQ 44 (440)
Q Consensus 9 ~~C~-d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l~ 44 (440)
..|+ ++++|.. ..|.. .|.+.+++|+|. ..||...
T Consensus 39 ~~C~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~G~ 77 (135)
T 2vj3_A 39 PRCEIDVNECVS-NPCQNDATCLDQIGEFQCICMPGYEGV 77 (135)
T ss_dssp TTSCEECCTTTT-CCCCSSCEEEECSSCEEEECCTTEESS
T ss_pred CcccccCccCCC-CCCCCCCEEeCCCCCceeeCCCCCcCC
Confidence 4564 6777764 34543 677777777777 7777653
No 353
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=58.91 E-value=1.6e+02 Score=29.90 Aligned_cols=31 Identities=6% Similarity=0.251 Sum_probs=25.3
Q ss_pred eeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 264 YDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 264 ~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
.++++.++.||+... .+.|+.++..+|+..=
T Consensus 111 ~~~~~~~~~v~v~~~-dg~l~alD~~tG~~~W 141 (668)
T 1kv9_A 111 RGVALWGDKVYVGTL-DGRLIALDAKTGKAIW 141 (668)
T ss_dssp CCCEEEBTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred cceEEECCEEEEEcC-CCEEEEEECCCCCEee
Confidence 567888999999864 6889999998888654
No 354
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=58.29 E-value=3.9 Score=37.12 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=26.1
Q ss_pred ecccCCCC----CCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 13 DADECLID----GSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 13 d~~~C~~~----~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
+.++|..+ ..|+|.|.|..+++.|. ..||.|..
T Consensus 119 ~~~~C~~~~~~~~~c~~~C~n~~g~~~csC~~Gy~L~~ 156 (286)
T 1nt0_A 119 DVDECRTSLGDSVPCDHYCHXYLGGYYCSCRVGYILHQ 156 (286)
T ss_dssp ECCTTC-------CCSSEEEEETTEEEEECCTTEEECT
T ss_pred cCCccCCCCCCcccCCCccccccCceEeecCCCceecc
Confidence 45677643 35999999999999999 99999875
No 355
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=56.79 E-value=1.7e+02 Score=29.64 Aligned_cols=29 Identities=7% Similarity=0.024 Sum_probs=20.1
Q ss_pred eeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 266 ITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 266 l~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
++..++.||..+ ..+.+..++..+|+..-
T Consensus 465 ~~t~gg~vf~g~-~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 465 LSTAGNLVFQGT-AAGQMHAYSADKGEALW 493 (668)
T ss_dssp EEETTTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred eEeCCCEEEEEC-CcccchhhhhhcChhhe
Confidence 445667888874 46788888887776554
No 356
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=55.50 E-value=4.8 Score=29.44 Aligned_cols=33 Identities=27% Similarity=0.543 Sum_probs=24.5
Q ss_pred cee--ecccCCCCCCCCC--CcccCC--CceEEc-cCCeee
Q psy14258 10 QCV--DADECLIDGSCDQ--TCTNTH--LSYTYT-DEGFSF 43 (440)
Q Consensus 10 ~C~--d~~~C~~~~~Cs~--~C~n~~--~~~~C~-~~g~~l 43 (440)
.|+ ++++|.. ..|.+ .|.+.. ++|+|. +.||..
T Consensus 42 ~C~~~~~~~C~~-~pC~ngg~C~~~~~~~~~~C~C~~G~~G 81 (91)
T 1tpg_A 42 QCHSVPVKSCSE-PRCFNGGTCQQALYFSDFVCQCPEGFAG 81 (91)
T ss_dssp BCCEECEEECSS-CCSCTTCEEEEESSSSCEEEECCTTCBS
T ss_pred ccccCcCCcccC-CCCCCCCEeecCCCCCCeEeECCCCCcC
Confidence 675 6888875 34765 587776 889999 888864
No 357
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=53.65 E-value=1.3 Score=36.47 Aligned_cols=42 Identities=26% Similarity=0.545 Sum_probs=28.1
Q ss_pred ceec-CCCCceeeccc--CCCC-CCC----CCCcccCCC----ceEEc-cCCeee
Q psy14258 2 TFRG-PNKTQCVDADE--CLID-GSC----DQTCTNTHL----SYTYT-DEGFSF 43 (440)
Q Consensus 2 ~~~~-~~~~~C~d~~~--C~~~-~~C----s~~C~n~~~----~~~C~-~~g~~l 43 (440)
||.+ +++++|+|+++ |... ..| ...|.+..+ +|.|. ..||..
T Consensus 31 Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~ 85 (162)
T 1uzk_A 31 DFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAW 85 (162)
T ss_dssp TCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEE
T ss_pred CCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCc
Confidence 5664 67899999988 8742 223 457888766 78899 888874
No 358
>1cz6_A Protein (androctonin); peptide, beta sheet, toxin; NMR {Androctonus australis} SCOP: j.3.1.3
Probab=53.05 E-value=4.5 Score=20.85 Aligned_cols=22 Identities=32% Similarity=0.653 Sum_probs=16.6
Q ss_pred ceeecccCCCCCCCCCCcccCC
Q psy14258 10 QCVDADECLIDGSCDQTCTNTH 31 (440)
Q Consensus 10 ~C~d~~~C~~~~~Cs~~C~n~~ 31 (440)
.|..+..|.-.++|--.|.|.|
T Consensus 3 vcrqikicrrrggcyykctnrp 24 (26)
T 1cz6_A 3 VCRQIKICRRRGGCYYKCTNRP 24 (26)
T ss_dssp CCCEEEECCSSSCCEEEECCCC
T ss_pred HhhhhHHHHhcCceEEEccCCC
Confidence 4777788887788877777764
No 359
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=52.60 E-value=2e+02 Score=29.23 Aligned_cols=31 Identities=6% Similarity=0.174 Sum_probs=25.1
Q ss_pred eeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 264 YDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 264 ~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
.++++.++.||+... .+.|+.+|..+|+..=
T Consensus 115 ~~~~~~~g~v~v~~~-dg~l~AlDa~TG~~~W 145 (689)
T 1yiq_A 115 RGVAVWKGKVYVGVL-DGRLEAIDAKTGQRAW 145 (689)
T ss_dssp CCCEEETTEEEEECT-TSEEEEEETTTCCEEE
T ss_pred CccEEECCEEEEEcc-CCEEEEEECCCCCEee
Confidence 457888999999874 6789999998888754
No 360
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=50.33 E-value=6.7 Score=32.88 Aligned_cols=33 Identities=18% Similarity=0.472 Sum_probs=25.4
Q ss_pred ceec--CCCCceeec--ccCCCCCCC---CCCcccCCCceEE
Q psy14258 2 TFRG--PNKTQCVDA--DECLIDGSC---DQTCTNTHLSYTY 36 (440)
Q Consensus 2 ~~~~--~~~~~C~d~--~~C~~~~~C---s~~C~n~~~~~~C 36 (440)
||.+ .+++.|+++ ++|.. .| ...|.+.+++|+|
T Consensus 123 Gy~g~~~~~~~C~~~~~~~C~~--~C~~~~~~C~n~~g~y~C 162 (186)
T 1z1y_A 123 GXVPNPEDEXXCTXTGETACQL--XCNTDNEVCXNVEGVYXC 162 (186)
T ss_dssp EEEEETTTTTEEEEEECCCCCC--CCCTTTEEEEEETTEEEE
T ss_pred CCcccCCCCCcceEcCCCcccc--cccccCcceecCCCCeee
Confidence 5654 377899986 88984 78 4489999999988
No 361
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=49.59 E-value=6.8 Score=24.49 Aligned_cols=32 Identities=16% Similarity=0.332 Sum_probs=20.5
Q ss_pred ecccCCC--CCCCCC-CcccCC--CceEEc-cCCeeee
Q psy14258 13 DADECLI--DGSCDQ-TCTNTH--LSYTYT-DEGFSFQ 44 (440)
Q Consensus 13 d~~~C~~--~~~Cs~-~C~n~~--~~~~C~-~~g~~l~ 44 (440)
++++|.. ...|.+ .|.... ++|.|. +.||...
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~ 39 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGV 39 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSST
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccC
Confidence 4566654 245555 565433 689999 9999753
No 362
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=48.85 E-value=2e+02 Score=28.68 Aligned_cols=143 Identities=13% Similarity=-0.019 Sum_probs=0.0
Q ss_pred EEEcCCCCceeEEeCCCCCcceeeccccccceeeccccccce--eeeecCCcE--EEe----------------ceEEEE
Q psy14258 97 AIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTE--RFPMVTHKI--VYP----------------EAIYFC 156 (440)
Q Consensus 97 ~~d~~~~~I~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~~--avD~~~~~l--Y~~----------------~~I~~~ 156 (440)
|-|...+++-|.......+++ ..+.+++..+.....- |+||.+++| -|. +.+.+.
T Consensus 257 WGD~ygnR~drf~~~vayLDG-----~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~~W~~d~~~~~~~~~~gqg~h~~~va 331 (591)
T 2zux_A 257 WGDSYGNRVDRFLAGIAYLDG-----QRPSLIMTRGYYAKTMLVAYNFRDGKLSKLWTLDSSKSGNEAFAGQGNHNLSIA 331 (591)
T ss_dssp GTCSSSSGGGCEEEEEECTTS-----SSCEEEEEECCSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGSSCCCSCCEEE
T ss_pred cccccccccccceeeEEECCC-----CCceEEEeccccceeEEEEEECCCCceEEEEEecCCCCCcccccccCCCCCeeE
Q ss_pred ecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCc---eeEEecCccCceEE-EEeCCCCEEE
Q psy14258 157 THYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTER---FPMVTHKIVYPYGV-TVDFPTKHVY 232 (440)
Q Consensus 157 ~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~---~~l~~~~~~~P~gl-~vD~~~~~ly 232 (440)
++||.-+.-|+.... ++|. +|.+-|+..-.+-..+...++|.... ...+.+.-..|.|. ..|..++.++
T Consensus 332 DVDgDG~dEIv~Gs~------~iD~-dG~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vl 404 (591)
T 2zux_A 332 DVDGDGKDEIIFGSM------AVDH-DGKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKIL 404 (591)
T ss_dssp CCSSSSSCEEEETTE------EECT-TSCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEE
T ss_pred eCCCCCCceEEEeee------EECC-CCCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEE
Q ss_pred EEeCCC---CcEEEEEccCCCc
Q psy14258 233 WVDTYL---DFIDRINYDGTDR 251 (440)
Q Consensus 233 ~~d~~~---~~i~~~~~dG~~~ 251 (440)
|.-... ++-...++|-..+
T Consensus 405 w~~~~~~d~Gr~~~~Didp~~p 426 (591)
T 2zux_A 405 WGVYAGKDVGRGMAADIDPRYP 426 (591)
T ss_dssp EEECCSSCCCCEEEECCCTTSS
T ss_pred EEcCCCCCCCceeEEecCCCCC
No 363
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=48.75 E-value=2.2e+02 Score=28.50 Aligned_cols=67 Identities=7% Similarity=-0.009 Sum_probs=42.0
Q ss_pred CCEEEEEeCCCCcEEEEEc--cCCCcEEEecCCcc---------CceeeeeE--ecCE----EEEEecCCCeEEEEeccC
Q psy14258 228 TKHVYWVDTYLDFIDRINY--DGTDRKTIRKGFPV---------QNLYDITV--FENN----LFVTSWRNQSIIRVNKFN 290 (440)
Q Consensus 228 ~~~ly~~d~~~~~i~~~~~--dG~~~~~i~~~~~~---------~~p~gl~~--~~~~----ly~td~~~~~i~~~~~~~ 290 (440)
+++||++....+.+..++. +|..+-........ ....++++ .++. ||+... .+.|+.++..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECCC
Confidence 6788887653567888877 44433332211100 11246788 7777 999864 57899999988
Q ss_pred CCceE
Q psy14258 291 SDDYE 295 (440)
Q Consensus 291 g~~~~ 295 (440)
|+..=
T Consensus 141 G~~~W 145 (599)
T 1w6s_A 141 GETVW 145 (599)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 87653
No 364
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=47.51 E-value=8 Score=34.71 Aligned_cols=34 Identities=35% Similarity=0.597 Sum_probs=27.6
Q ss_pred eecccCCC----CCCCCCCcccCCCceEEc-cCCeeeec
Q psy14258 12 VDADECLI----DGSCDQTCTNTHLSYTYT-DEGFSFQG 45 (440)
Q Consensus 12 ~d~~~C~~----~~~Cs~~C~n~~~~~~C~-~~g~~l~~ 45 (440)
.+.++|.. ...|.|.|.|..+++.|. ..||.+..
T Consensus 119 ~~~~~C~~~~~~~~~c~~~C~n~~g~~~C~C~~Gy~l~~ 157 (278)
T 3dem_A 119 VDVDECKEREDEELSCDHYCHNYIGGYYCSCRFGYILHT 157 (278)
T ss_dssp EECCTTTC-----CCCSSEEEEETTEEEEECCTTCEECT
T ss_pred eccccCCCCCCCcccCCcCcCCccCCcEEEeCCcceecc
Confidence 35567764 248999999999999999 99999865
No 365
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=44.87 E-value=2.7e+02 Score=28.34 Aligned_cols=28 Identities=14% Similarity=0.093 Sum_probs=18.8
Q ss_pred eEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 267 TVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 267 ~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+..++.||... .++.++.++..+|+..-
T Consensus 483 ~tagglvf~gt-~dg~l~a~D~~tG~~lw 510 (689)
T 1yiq_A 483 STAGNLVFEGS-ADGRVIAYAADTGEKLW 510 (689)
T ss_dssp EETTTEEEEEC-TTSEEEEEETTTCCEEE
T ss_pred eECCCEEEEEC-CCCcEEEEECCCCccce
Confidence 33456777764 46788888887777653
No 366
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=42.73 E-value=18 Score=22.18 Aligned_cols=18 Identities=28% Similarity=0.211 Sum_probs=14.5
Q ss_pred Ccc--cCCCceEEc-cCCeee
Q psy14258 26 TCT--NTHLSYTYT-DEGFSF 43 (440)
Q Consensus 26 ~C~--n~~~~~~C~-~~g~~l 43 (440)
.|. +..++|+|. +.||..
T Consensus 16 ~C~~~~~~~~~~C~C~~G~~G 36 (45)
T 1a3p_A 16 VXMHIESLDSYTCNCVIGYSG 36 (45)
T ss_dssp EEEECTTTSSEEEECCTTEET
T ss_pred EEEeecCCCCEEEEcCCCCcC
Confidence 465 677899999 999974
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=42.42 E-value=2.1e+02 Score=26.41 Aligned_cols=245 Identities=12% Similarity=0.062 Sum_probs=114.3
Q ss_pred CCceEEEEcCC-CCeEEEEEcCCC-CCcEEEEeCCCCCceeEEec-Cc------------cCceEEEEeCC--CCEEEEE
Q psy14258 172 SKPRGIALDPT-SGYMFFTKWGAT-RPMLERSLLDGTERFPMVTH-KI------------VYPYGVTVDFP--TKHVYWV 234 (440)
Q Consensus 172 ~~P~~iavd~~-~g~lywtd~~~~-~~~I~r~~~dG~~~~~l~~~-~~------------~~P~gl~vD~~--~~~ly~~ 234 (440)
....+|++||. .+.||..-.... ...|.+..-.|..-+.+... .+ .....|++|+. .++||..
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 45789999983 467887754311 01688765555433322111 01 12346888864 5788875
Q ss_pred eCCCCcEEEEEccCCCcEEEecC---C--------------ccCceeeeeEe---cCEEEEEecCCCeEEEEeccCCCce
Q psy14258 235 DTYLDFIDRINYDGTDRKTIRKG---F--------------PVQNLYDITVF---ENNLFVTSWRNQSIIRVNKFNSDDY 294 (440)
Q Consensus 235 d~~~~~i~~~~~dG~~~~~i~~~---~--------------~~~~p~gl~~~---~~~ly~td~~~~~i~~~~~~~g~~~ 294 (440)
-. .+.|.+.+-.|..-+.+... . .......|+++ .+.||+... .+.|++-. ..|+.-
T Consensus 135 ~~-~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~-DgG~tW 211 (394)
T 3b7f_A 135 TS-PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFEST-DAGTDW 211 (394)
T ss_dssp EE-TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEES-STTSSC
T ss_pred ec-CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEEC-CCCCCc
Confidence 43 34576665344433333210 0 01123466665 357887753 24466543 245443
Q ss_pred EEEe-cCC---CC----------eEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEcCCCCCCceeeeeecC--CCCc
Q psy14258 295 ETIA-NFS---RP----------FAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITD--LKRP 358 (440)
Q Consensus 295 ~~~~-~~~---~p----------~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~--~~~p 358 (440)
+.+. ... .| ..+.+. +. ....|+++.. +.|++..-.+. ..+.....+.. ....
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~-~~-------~~~~l~vg~~--~gl~~s~D~G~-tW~~~~~~l~~~~~~~~ 280 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQH-PA-------APDILYQQNH--CGIYRMDRREG-VWKRIGDAMPREVGDIG 280 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEEC-SS-------STTEEEEEET--TEEEEEETTTT-EEECGGGGSCTTTCSCE
T ss_pred eECCCCccccccCCCccccCcceeEEEEC-CC-------CCCEEEEEcC--CeEEEeCCCCC-cceECCCCCCCCCccce
Confidence 3322 111 01 122221 10 0145666544 55665543333 11111100111 0123
Q ss_pred eEEEEEcC-CCEEEEEEC------------CCCeEEEEecCCCCeEEEEECCCCC--------eeeEEEecCC-CcEEEE
Q psy14258 359 SVIDYHEK-EEYIYYAEL------------TSYVIERRKMFGRGKEVVIDTGIYN--------VEGMAVDWMA-NNLYWT 416 (440)
Q Consensus 359 ~~l~~d~~-~~~vy~~d~------------~~~~I~r~~~~g~~~~~~~~~~~~~--------~~glAvD~~~-~~lYwt 416 (440)
..|++|+. .+.||++-. ....|++-.-.|..-+.+ ..++.. ..+||+|+.. +.||..
T Consensus 281 ~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~-~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g 359 (394)
T 3b7f_A 281 FPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQ-DRGLPTDQAWLTVKRQAMTADAHAPVGVYFG 359 (394)
T ss_dssp EEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEE-CBTSCCSSCCCCCCTBSEEECCSSSCCEEEE
T ss_pred EEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceEC-CCCCCCccccceEEEEEEEECCCCCCEEEEE
Confidence 46788763 466777631 124677654334332333 233322 1468998754 457775
Q ss_pred eCCCCeEEEEEeCCCe
Q psy14258 417 DAGIGTINVAKISDFS 432 (440)
Q Consensus 417 d~~~~~I~~~~~~g~~ 432 (440)
. ..+.|.+..-.|++
T Consensus 360 ~-~~g~l~~S~D~G~t 374 (394)
T 3b7f_A 360 T-TGGEIWASADEGEH 374 (394)
T ss_dssp C-TTSCEEEESSTTSB
T ss_pred e-CCCeEEEECCCCCC
Confidence 3 23456665555543
No 368
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=41.86 E-value=2.3e+02 Score=26.72 Aligned_cols=122 Identities=9% Similarity=-0.119 Sum_probs=68.2
Q ss_pred EEEEEeeecccEEEE---EEcCCCCceeEEeCCCCCcceeeccccc--cc-eeeccccccce-eeeecCCcEEEe----c
Q psy14258 83 AIYFCTHYMEHCMIA---IDLNLSKPRGIALDPTSGYMFFTKWGAT--RP-MLERSLLDGTE-RFPMVTHKIVYP----E 151 (440)
Q Consensus 83 ~~~i~~d~~~~~ly~---~d~~~~~I~~~~~~~~~~~~~~~~~~~~--~v-~~~~~~~~p~~-avD~~~~~lY~~----~ 151 (440)
+.+++|++.++.|+. +-...+.|+..++........ ....+ .+ .+...-..+.+ ++.+..++++.+ +
T Consensus 95 v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK--QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp EEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC--SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTS
T ss_pred ccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc--CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCC
Confidence 899999999888876 444445555554432100000 00000 00 01112334555 666665667766 7
Q ss_pred eEEEEecCCceEEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCce
Q psy14258 152 AIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERF 209 (440)
Q Consensus 152 ~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~ 209 (440)
.|.+.++...............+.+++..|...+|+..... +.|...+++|....
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d---g~v~iwd~~~~~~~ 227 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN---GTVVQYLPTLQEKK 227 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT---SCEEEECTTCCEEE
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC---CcEEEEccCCcccc
Confidence 78888887654332222223578999999965555555543 58888888865443
No 369
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=40.87 E-value=2.9e+02 Score=27.66 Aligned_cols=119 Identities=11% Similarity=0.047 Sum_probs=65.0
Q ss_pred EEEEecCCceEEEEEcCCCCCceEE-EEcCCCCeE--EEE-EcCC---------CCCcEEEEeCCCCCceeEEecCccCc
Q psy14258 153 IYFCTHYMEHCMIAIDLNLSKPRGI-ALDPTSGYM--FFT-KWGA---------TRPMLERSLLDGTERFPMVTHKIVYP 219 (440)
Q Consensus 153 I~~~~~dg~~~~~~~~~~~~~P~~i-avd~~~g~l--ywt-d~~~---------~~~~I~r~~~dG~~~~~l~~~~~~~P 219 (440)
+-++.+||.....++..+.....-+ |.|..++.| .|. +... ..+.+..+++||..+.+|+...
T Consensus 274 ~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~Gs---- 349 (620)
T 2zuy_A 274 AGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYGA---- 349 (620)
T ss_dssp EEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEETT----
T ss_pred eeEEecCCCCceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEee----
Confidence 5567788876666655443332222 445545532 443 2211 1268999999999999998643
Q ss_pred eEEEEeCCCCEEEEEeC-CCCcEEEEEccCC--CcEEEecCCccCceeeeeEe---cCEEEEEe
Q psy14258 220 YGVTVDFPTKHVYWVDT-YLDFIDRINYDGT--DRKTIRKGFPVQNLYDITVF---ENNLFVTS 277 (440)
Q Consensus 220 ~gl~vD~~~~~ly~~d~-~~~~i~~~~~dG~--~~~~i~~~~~~~~p~gl~~~---~~~ly~td 277 (440)
.++|..+..||-+.. +.+.+...++|.. ..+++.-...-..|.|.++. .+.++|.-
T Consensus 350 --~~iD~dG~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~ 411 (620)
T 2zuy_A 350 --MAVDHDGTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGV 411 (620)
T ss_dssp --EEECTTSSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEE
T ss_pred --eEECCCCCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEe
Confidence 578844444444332 2346777777643 44544332112356677654 23555544
No 370
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=40.26 E-value=84 Score=31.46 Aligned_cols=89 Identities=11% Similarity=-0.055 Sum_probs=0.0
Q ss_pred cCCCCC----CceeeeeecCCCCceEEEEEcCCCEEEEEECCCCeEEEEecC-----------CCCeEEEEECCCC-Cee
Q psy14258 339 FKRDGT----TEQAIMPITDLKRPSVIDYHEKEEYIYYAELTSYVIERRKMF-----------GRGKEVVIDTGIY-NVE 402 (440)
Q Consensus 339 ~~~~~~----~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d~~~~~I~r~~~~-----------g~~~~~~~~~~~~-~~~ 402 (440)
+|+. . ......-++.-.+|.|+.++|++.++|++..-+.++..++.. .-...++.+..++ +|-
T Consensus 303 iD~~-~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPl 381 (638)
T 3sbq_A 303 LDGR-KKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPL 381 (638)
T ss_dssp EECS-CBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEE
T ss_pred Eccc-cccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCccc
Q ss_pred eEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 403 GMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 403 glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
-.|+|..+ +.|-|-.-...|..-+++
T Consensus 382 Ht~Fd~~G-~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 382 HTTFDGRG-NAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EEEECSSS-EEEEEETTTTEEEEEEHH
T ss_pred EEEECCCC-ceEeeeeecceEEEEecc
No 371
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=39.80 E-value=2e+02 Score=25.40 Aligned_cols=251 Identities=10% Similarity=-0.040 Sum_probs=120.0
Q ss_pred CCceEEEEcCCCCeEEEEEcCCCCCcEEEEeCCCCCceeE--EecCccCceEEEEeCC-CCEEEEEeCCCCcEEEEEccC
Q psy14258 172 SKPRGIALDPTSGYMFFTKWGATRPMLERSLLDGTERFPM--VTHKIVYPYGVTVDFP-TKHVYWVDTYLDFIDRINYDG 248 (440)
Q Consensus 172 ~~P~~iavd~~~g~lywtd~~~~~~~I~r~~~dG~~~~~l--~~~~~~~P~gl~vD~~-~~~ly~~d~~~~~i~~~~~dG 248 (440)
.....++++|. |.+..+-... +.|...++.......+ +...-.....+++.+. .+.++.+-...+.|..-++..
T Consensus 14 ~~V~~v~~s~~-g~~lasgs~D--~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 14 DMIHDAQMDYY-GTRLATCSSD--RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CCEEEEEECGG-GCEEEEEETT--TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred CeEEEeeEcCC-CCEEEEEeCC--CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 45678999884 5544443332 4677766653322111 2222234566777542 233333334556677666654
Q ss_pred CC-cEE-EecCCccCceeeeeEec---CEEEEEecCCCeEEEEeccCCCceEEEecCC-C---CeEEEEeccCCCC----
Q psy14258 249 TD-RKT-IRKGFPVQNLYDITVFE---NNLFVTSWRNQSIIRVNKFNSDDYETIANFS-R---PFAIHIYHRQKQP---- 315 (440)
Q Consensus 249 ~~-~~~-i~~~~~~~~p~gl~~~~---~~ly~td~~~~~i~~~~~~~g~~~~~~~~~~-~---p~~~~v~~~~~qp---- 315 (440)
.. ... ...+ .-.....+++.. +.++.+-...+.|...+..++.......... + ...+ .++|...+
T Consensus 91 ~~~~~~~~~~~-h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~-~~~~~~~~~~~~ 168 (316)
T 3bg1_A 91 GTWEKSHEHAG-HDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAV-SWAPAVVPGSLI 168 (316)
T ss_dssp SCCCEEEEECC-CSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCC-EECCCCCC----
T ss_pred CcceEEEEccC-CCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceE-EEccccCCcccc
Confidence 32 111 1221 122345677654 3445555556666665554432222111111 1 1111 11121110
Q ss_pred ---CCCCC-ceeEEeecCCccEEEEEEcCCCCCCceeeeeecCC-CCceEEEEEcCC---CEEEEEECCCCeEEEEecCC
Q psy14258 316 ---DALKP-STFLLYAKGKPAIIKGLTFKRDGTTEQAIMPITDL-KRPSVIDYHEKE---EYIYYAELTSYVIERRKMFG 387 (440)
Q Consensus 316 ---~~~~~-~~~l~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~-~~p~~l~~d~~~---~~vy~~d~~~~~I~r~~~~g 387 (440)
....+ ...++++-+..+.|+..++... ........+.+. ....+++|.+.+ +.+..+-...++|..-+++.
T Consensus 169 ~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 169 DHPSGQKPNYIKRFASGGCDNLIKLWKEEED-GQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp --CCSCCCCCCCBEECCBTTSBCCEEEECTT-SCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccccccCccccceEEEecCCCeEEEEEeCCC-CccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 00001 1223444444467777776533 110111222222 245689998875 24556666788888888764
Q ss_pred C--C--eEEEEECCCCCeeeEEEecCCCcEEEEeCCCCeEEEEEeC
Q psy14258 388 R--G--KEVVIDTGIYNVEGMAVDWMANNLYWTDAGIGTINVAKIS 429 (440)
Q Consensus 388 ~--~--~~~~~~~~~~~~~glAvD~~~~~lYwtd~~~~~I~~~~~~ 429 (440)
. . ...++...-..+..+++.+.+..|.-+ ...++|.+.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~-~~D~~v~lw~~~ 292 (316)
T 3bg1_A 248 ASSNTWSPKLLHKFNDVVWHVSWSITANILAVS-GGDNKVTLWKES 292 (316)
T ss_dssp TTCCCCBCCEEEECSSCEEEEEECTTTCCEEEE-ESSSCEEEEEEC
T ss_pred ccccchhhhhhhcCCCcEEEEEEcCCCCEEEEE-cCCCeEEEEEEC
Confidence 2 1 112222223567889998877655444 445678888765
No 372
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=37.52 E-value=17 Score=28.65 Aligned_cols=33 Identities=27% Similarity=0.608 Sum_probs=22.0
Q ss_pred ceeecccCCCCCCCCC--Ccc-------cCCCceEEc-cCCeee
Q psy14258 10 QCVDADECLIDGSCDQ--TCT-------NTHLSYTYT-DEGFSF 43 (440)
Q Consensus 10 ~C~d~~~C~~~~~Cs~--~C~-------n~~~~~~C~-~~g~~l 43 (440)
.|.++++|.. ..|.+ .|. +.+++|.|. +.||..
T Consensus 48 ~c~~~~~C~~-~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G 90 (143)
T 4d90_A 48 EPTSAGPCTP-NPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNG 90 (143)
T ss_dssp SCCCCCTTSS-CCCCTTCEEEECCCEETTEECCEEEECCTTEES
T ss_pred ccccCCcCCC-CCCCCCCEecCCCccccCCCCCeEeECcCCCcC
Confidence 3445566654 34554 676 677899999 999863
No 373
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=34.70 E-value=3.8e+02 Score=27.13 Aligned_cols=74 Identities=12% Similarity=0.020 Sum_probs=42.0
Q ss_pred EEEEeCCCCEEEEEeCCC------------------CcEEEEEccCCCcEEEec-CC-------ccCceeeee--Eec--
Q psy14258 221 GVTVDFPTKHVYWVDTYL------------------DFIDRINYDGTDRKTIRK-GF-------PVQNLYDIT--VFE-- 270 (440)
Q Consensus 221 gl~vD~~~~~ly~~d~~~------------------~~i~~~~~dG~~~~~i~~-~~-------~~~~p~gl~--~~~-- 270 (440)
.+++|+..++||+..... ..|..++.+........+ .. ....|.-+. +++
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~ 326 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKP 326 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcE
Confidence 578999999999986432 258888876444433332 10 012232222 223
Q ss_pred -CEEEEEecCCCeEEEEeccCCCceE
Q psy14258 271 -NNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 271 -~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+.||..+ .++.|+.+|+.+|+..-
T Consensus 327 ~~~l~~~~-~~G~l~~lD~~tG~~l~ 351 (677)
T 1kb0_A 327 RKVILHAP-KNGFFFVLDRTNGKFIS 351 (677)
T ss_dssp EEEEEECC-TTSEEEEEETTTCCEEE
T ss_pred eeEEEEEC-CCCEEEEEECCCCCEec
Confidence 2344443 46778888887776643
No 374
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=34.52 E-value=16 Score=33.42 Aligned_cols=31 Identities=23% Similarity=0.588 Sum_probs=22.2
Q ss_pred eecccCCCCCCCCC--CcccCCCceEEc-cCCeee
Q psy14258 12 VDADECLIDGSCDQ--TCTNTHLSYTYT-DEGFSF 43 (440)
Q Consensus 12 ~d~~~C~~~~~Cs~--~C~n~~~~~~C~-~~g~~l 43 (440)
.|+++|..+ .|.+ .|.+..++|.|. +.||..
T Consensus 3 ~d~~~C~~~-pC~~~g~C~~~~~~~~C~C~~g~~g 36 (317)
T 3h5c_B 3 KGGSPCISQ-PCLHNGSCQDSIWGYTCTCSPGYEG 36 (317)
T ss_dssp ---CCTTSC-CCTTTCCCCCCSSSCCCCCSSSCCS
T ss_pred ccCCcCCCC-CCCCCCEeECCCCCeEEECCCCCcC
Confidence 467788763 4765 588989999999 999874
No 375
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=33.90 E-value=2.8e+02 Score=25.40 Aligned_cols=208 Identities=9% Similarity=-0.027 Sum_probs=98.9
Q ss_pred CceEEEEeC-------CCCEEEEEeCCCCcEEEEEccCC-CcEEEecCCccCceeeeeEecC--EEEEEecCCCeEEEEe
Q psy14258 218 YPYGVTVDF-------PTKHVYWVDTYLDFIDRINYDGT-DRKTIRKGFPVQNLYDITVFEN--NLFVTSWRNQSIIRVN 287 (440)
Q Consensus 218 ~P~gl~vD~-------~~~~ly~~d~~~~~i~~~~~dG~-~~~~i~~~~~~~~p~gl~~~~~--~ly~td~~~~~i~~~~ 287 (440)
..+.+++.+ ..+++..+-...+.|..-++... ....+... -.....+++..+ .+..+-..++.|...+
T Consensus 138 ~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd 215 (393)
T 4gq1_A 138 FVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPL--SSPGISVQFRPSNPNQLIVGERNGNIRIFD 215 (393)
T ss_dssp CEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEEC--SSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred ceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCC--CCCcEEEEECCCCCceEEecCCCCEEEEEE
Confidence 456677653 24556655555666666665433 22333222 234567887743 4666666678888778
Q ss_pred ccCCCceEEEecCC---CCeEEEEeccC----------CCCCC----CCCceeEEeecCCccEEEEEEcCCCCCCcee--
Q psy14258 288 KFNSDDYETIANFS---RPFAIHIYHRQ----------KQPDA----LKPSTFLLYAKGKPAIIKGLTFKRDGTTEQA-- 348 (440)
Q Consensus 288 ~~~g~~~~~~~~~~---~p~~~~v~~~~----------~qp~~----~~~~~~l~~~~~~~~~I~~i~~~~~~~~~~~-- 348 (440)
..+++......... ....+...... ..... ..+++..+++-...+.++..++.........
T Consensus 216 ~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~ 295 (393)
T 4gq1_A 216 WTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD 295 (393)
T ss_dssp TTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------
T ss_pred CCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee
Confidence 76665433211100 00001000000 00000 0133334444444466666665433100000
Q ss_pred -------------eeeecCCCCceEEEEEcC-CCEEEEEECCCCeEEEEecCCCC-eEEEEECCCCCeeeEEEecCCCcE
Q psy14258 349 -------------IMPITDLKRPSVIDYHEK-EEYIYYAELTSYVIERRKMFGRG-KEVVIDTGIYNVEGMAVDWMANNL 413 (440)
Q Consensus 349 -------------~~~~~~~~~p~~l~~d~~-~~~vy~~d~~~~~I~r~~~~g~~-~~~~~~~~~~~~~glAvD~~~~~l 413 (440)
...........+..+.+. ++.+..+....++|+-.+..... ...... .-..+..||+.+.++.|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~-~~~~V~svafspdG~~L 374 (393)
T 4gq1_A 296 STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQ-LGMPIVDFCWHQDGSHL 374 (393)
T ss_dssp --------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEE-CSSCEEEEEECTTSSEE
T ss_pred ecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecC-CCCcEEEEEEcCCCCEE
Confidence 000111112223334433 44344445567889888876433 333333 33568999999988876
Q ss_pred EEEeCCCCeEEEEEeCC
Q psy14258 414 YWTDAGIGTINVAKISD 430 (440)
Q Consensus 414 Ywtd~~~~~I~~~~~~g 430 (440)
-.+. .+.+..++|.|
T Consensus 375 A~as--~~Gv~lvrL~g 389 (393)
T 4gq1_A 375 AIAT--EGSVLLTRLMG 389 (393)
T ss_dssp EEEE--SSEEEEEEEGG
T ss_pred EEEe--CCCeEEEEEeC
Confidence 5553 57799999988
No 376
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=27.18 E-value=3.8e+02 Score=26.85 Aligned_cols=105 Identities=13% Similarity=0.136 Sum_probs=61.8
Q ss_pred ccceeeccccccce--eeeecCCcE--EEe----------------ceEEEEecCCceEEEEEcCCCCCceEEEEcCCCC
Q psy14258 125 TRPMLERSLLDGTE--RFPMVTHKI--VYP----------------EAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSG 184 (440)
Q Consensus 125 ~~v~~~~~~~~p~~--avD~~~~~l--Y~~----------------~~I~~~~~dg~~~~~~~~~~~~~P~~iavd~~~g 184 (440)
+.+++..+.....- |+||.+++| .|. +.+.+.++||.-+.-|+.. +.++|. +|
T Consensus 284 Ps~v~~rG~Ytr~~v~A~d~~~g~L~~~W~~ds~~~~~~~~~gqg~H~~svaDVDGDG~dEIv~G------s~~iD~-dG 356 (620)
T 2zuy_A 284 PSLVMARGYYTRTVLVAYDFRNGRLKKRWVFDSNQPGHEAYAGQGNHSLSVADVDGDGKDEIIYG------AMAVDH-DG 356 (620)
T ss_dssp CEEEEEECSSSSCEEEEEEEETTEEEEEEEEETTSTTCGGGTTCCCSSCEEECCSSSSSCEEEET------TEEECT-TS
T ss_pred ceEEEecCcccceeEEEEEccCCceeeeeEecCCCCcccccccccCcCceEEecCCCCceeEEEe------eeEECC-CC
Confidence 34444444444434 888888754 444 2478888887655444432 257886 68
Q ss_pred eEEEEEcCCCCCcEEEEeCCCCC--ceeEE-ecCccCceEEE-EeCCCCEEEEEeC
Q psy14258 185 YMFFTKWGATRPMLERSLLDGTE--RFPMV-THKIVYPYGVT-VDFPTKHVYWVDT 236 (440)
Q Consensus 185 ~lywtd~~~~~~~I~r~~~dG~~--~~~l~-~~~~~~P~gl~-vD~~~~~ly~~d~ 236 (440)
.+.|+..-.+-..+...++|... .+++. .+.-..|.|.+ .|..++.++|.-.
T Consensus 357 ~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~tG~vlw~~~ 412 (620)
T 2zuy_A 357 TGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAGTGEILWGVH 412 (620)
T ss_dssp SEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECCCCcEEEEec
Confidence 87777544332478888888652 23222 12222354554 5777888888754
No 377
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=27.05 E-value=3e+02 Score=23.59 Aligned_cols=259 Identities=7% Similarity=-0.072 Sum_probs=126.1
Q ss_pred eEEEEeecccceeeeEEEecCCCcee--eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeCCCCCcceeeccccc
Q psy14258 48 THLYETIEAFWEECFGPMDIEEWDEG--LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALDPTSGYMFFTKWGAT 125 (440)
Q Consensus 48 ~ll~s~~~~~~~~~I~~~~l~~~~~~--~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~~~~~~~~~~~~~~~ 125 (440)
.|.++.++. |+..+++..... +....+...+.++++.+.++.|. +-...+.|...++.... .+
T Consensus 38 ~lAvg~D~t-----V~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~-sgs~Dg~v~iw~~~~~~--~~------- 102 (318)
T 4ggc_A 38 VLAVALDNS-----VYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLA-VGTSSAEVQLWDVQQQK--RL------- 102 (318)
T ss_dssp EEEEEETTE-----EEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEE-EEETTSEEEEEETTTTE--EE-------
T ss_pred EEEEEeCCE-----EEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEE-EEECCCcEEEeecCCce--eE-------
Confidence 455555666 888887654433 33333333489999999866555 44444666555443221 11
Q ss_pred cceeeccccccce-eeeecCCcEEEe---ceEEEEecCCce-EEEEEcCCCCCceEEEEcCCCCeEEEEEcCCCCCcEEE
Q psy14258 126 RPMLERSLLDGTE-RFPMVTHKIVYP---EAIYFCTHYMEH-CMIAIDLNLSKPRGIALDPTSGYMFFTKWGATRPMLER 200 (440)
Q Consensus 126 ~v~~~~~~~~p~~-avD~~~~~lY~~---~~I~~~~~dg~~-~~~~~~~~~~~P~~iavd~~~g~lywtd~~~~~~~I~r 200 (440)
.........- ++.+.+..|... +.+......... ..............++..+. +.++.+-... +.|..
T Consensus 103 ---~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~~~d--~~i~i 176 (318)
T 4ggc_A 103 ---RNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD-GRHLASGGND--NLVNV 176 (318)
T ss_dssp ---EEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT-SSEEEEEETT--SCEEE
T ss_pred ---EEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCC-CCEEEEEecC--cceeE
Confidence 0111222333 555555544433 445544444332 22222334566778888875 4444443332 46777
Q ss_pred EeCCCCC-cee---EEecCccCceEEEEeCCCCEEEEEe--CCCCcEEEEEccCCCcEEEecCCccCceeeeeEe--cCE
Q psy14258 201 SLLDGTE-RFP---MVTHKIVYPYGVTVDFPTKHVYWVD--TYLDFIDRINYDGTDRKTIRKGFPVQNLYDITVF--ENN 272 (440)
Q Consensus 201 ~~~dG~~-~~~---l~~~~~~~P~gl~vD~~~~~ly~~d--~~~~~i~~~~~dG~~~~~i~~~~~~~~p~gl~~~--~~~ 272 (440)
.++.... ... ...........++..+....+...- ...+.|..-+............ ......+.+. ++.
T Consensus 177 wd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~--~~~v~~~~~~~~~~~ 254 (318)
T 4ggc_A 177 WPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDA--HSQVCSILWSPHYKE 254 (318)
T ss_dssp EESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEEC--SSCEEEEEEETTTTE
T ss_pred EECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccc--eeeeeeeeecccccc
Confidence 7764221 111 1111223345666666666655432 2334565555544443333222 2233444443 335
Q ss_pred EEEEe-cCCCeEEEEeccCCCceEEEec-CCCCeEEEEeccCCCCCCCCCceeEEeecCCccEEEEEEc
Q psy14258 273 LFVTS-WRNQSIIRVNKFNSDDYETIAN-FSRPFAIHIYHRQKQPDALKPSTFLLYAKGKPAIIKGLTF 339 (440)
Q Consensus 273 ly~td-~~~~~i~~~~~~~g~~~~~~~~-~~~p~~~~v~~~~~qp~~~~~~~~l~~~~~~~~~I~~i~~ 339 (440)
++.+. ...+.|...+..+++....+.+ ......+.+. |++.++++-+..+.|+..++
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~s----------pdg~~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMS----------PDGATVASAAADETLRLWRC 313 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEEC----------TTSSCEEEEETTTEEEEECC
T ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEc----------CCCCEEEEEecCCeEEEEEC
Confidence 55443 3467777777777766555543 2233444433 23333444344466665554
No 378
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=23.09 E-value=4.3e+02 Score=24.04 Aligned_cols=50 Identities=4% Similarity=-0.147 Sum_probs=30.7
Q ss_pred eeEEEecCCCcee-eeeecccceEEEEEeeecccEEEEEEcCCCCceeEEeC
Q psy14258 61 CFGPMDIEEWDEG-LSFLTFAQEAIYFCTHYMEHCMIAIDLNLSKPRGIALD 111 (440)
Q Consensus 61 ~I~~~~l~~~~~~-~~~~~~~~~~~~i~~d~~~~~ly~~d~~~~~I~~~~~~ 111 (440)
+|+..++...... ....... .+.+++|++.+..+..+-...+.|+..++.
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~-~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSS-PGISVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSS-CEEEEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred eEEEEECCCCceeeeecCCCC-CcEEEEECCCCCceEEecCCCCEEEEEECC
Confidence 3776777544333 2223322 389999999877666666666777665543
No 379
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=22.75 E-value=5.7e+02 Score=25.38 Aligned_cols=75 Identities=13% Similarity=-0.027 Sum_probs=43.7
Q ss_pred EEEEeCCCCEEEEEeCC---------------CCcEEEEEccCCCcEEEecCC--------ccCceeeeeE---ecC--E
Q psy14258 221 GVTVDFPTKHVYWVDTY---------------LDFIDRINYDGTDRKTIRKGF--------PVQNLYDITV---FEN--N 272 (440)
Q Consensus 221 gl~vD~~~~~ly~~d~~---------------~~~i~~~~~dG~~~~~i~~~~--------~~~~p~gl~~---~~~--~ 272 (440)
.+++|+..+.||+.... .+.|..++.+........+.. ....|.-+.. .+. .
T Consensus 245 ~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~ 324 (599)
T 1w6s_A 245 WYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARK 324 (599)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEE
T ss_pred ceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEE
Confidence 47899999999998643 247888888655554433311 0112322222 121 4
Q ss_pred EEEEecCCCeEEEEeccCCCceE
Q psy14258 273 LFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 273 ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+++.-..++.++.+++.+|+..-
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~lw 347 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGALVS 347 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCEEE
T ss_pred EEEEECCCcEEEEEECCCCCEee
Confidence 44444457788888887776543
No 380
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=21.99 E-value=38 Score=25.28 Aligned_cols=40 Identities=25% Similarity=0.434 Sum_probs=28.4
Q ss_pred ceecCCCCceeeccc-CC-CCCCCCC--CcccC-CCceEEc-cCCee
Q psy14258 2 TFRGPNKTQCVDADE-CL-IDGSCDQ--TCTNT-HLSYTYT-DEGFS 42 (440)
Q Consensus 2 ~~~~~~~~~C~d~~~-C~-~~~~Cs~--~C~n~-~~~~~C~-~~g~~ 42 (440)
+|. .|+..|...+. |+ .+|+|+. .|... +..-.|. .++|.
T Consensus 39 gY~-~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 39 GFK-EVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp TEE-ECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred Cee-ccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 355 57788997788 76 5789988 67655 4677788 77653
No 381
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=20.87 E-value=6.7e+02 Score=25.49 Aligned_cols=194 Identities=13% Similarity=0.058 Sum_probs=87.8
Q ss_pred eEEEEcCCCC-eEEEEEcCC---CCCcEEEEeCCCCCceeEEecCccCce-EEEEeCCC-CEEEEEeCCCCcEEEEEccC
Q psy14258 175 RGIALDPTSG-YMFFTKWGA---TRPMLERSLLDGTERFPMVTHKIVYPY-GVTVDFPT-KHVYWVDTYLDFIDRINYDG 248 (440)
Q Consensus 175 ~~iavd~~~g-~lywtd~~~---~~~~I~r~~~dG~~~~~l~~~~~~~P~-gl~vD~~~-~~ly~~d~~~~~i~~~~~dG 248 (440)
.+|++||.+. .+|++-... ..+.|++..=.|..=+.+ ..+ ..|. .|++++.. +.||++. ..+.+++. .||
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~-~~p-~~~~~~l~~~P~~~~~l~a~~-~~~gly~S-~Dg 168 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQT-DLP-FHPLTQMMYSPQNSDYLLALS-TENGLWVS-KNF 168 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEE-ECS-SCBSSCCEEETTEEEEEEEEB-TTCCEEEE-SST
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEec-cCC-CCCceEEEEecCCCCEEEEEE-CCCCEEEE-eCC
Confidence 3577777543 566664310 014566655445443333 222 1232 68888765 4556554 34556664 455
Q ss_pred CCc-EEEecCCccCceeeeeE-ecCEEEEEecCCC-------e--EEEEeccCCCceEEEecCCCCeEEEEeccCCCCCC
Q psy14258 249 TDR-KTIRKGFPVQNLYDITV-FENNLFVTSWRNQ-------S--IIRVNKFNSDDYETIANFSRPFAIHIYHRQKQPDA 317 (440)
Q Consensus 249 ~~~-~~i~~~~~~~~p~gl~~-~~~~ly~td~~~~-------~--i~~~~~~~g~~~~~~~~~~~p~~~~v~~~~~qp~~ 317 (440)
+.. +.+..+ +.. ..+ ..+.||+.-..+. . |.+-. .-++..+++.. +..++.+.
T Consensus 169 G~TW~~i~~~--v~~---~~f~~~~~Iy~~~~~~~~~~~~~g~l~L~~S~-D~g~t~~~l~~--~i~~f~~~-------- 232 (685)
T 3f6k_A 169 GGKWEEIHKA--VCL---AKWGSDNTIFFTTYANGSCKADLGALELWRTS-DLGKSFKTIGV--KIYSFGLG-------- 232 (685)
T ss_dssp TSSEEEEESS--EEE---EEECSTTCEEEEECSSSCTTTTTTSEEEEEES-STTSSCEEEEE--EEEEEEEE--------
T ss_pred CCCcEEeecC--ccc---cccCCCCeEEEEeeccccccCCCCceEEEEec-CCCCCceEeec--cceeeeee--------
Confidence 443 444333 221 111 1357777643221 1 11111 11222222111 12233333
Q ss_pred CCCceeEEeecCC---ccEEEEEEcCCCCCCceeeeeecCCCCceEEEEEcCCCEEEEEE-----CCCCeEEEEecCCCC
Q psy14258 318 LKPSTFLLYAKGK---PAIIKGLTFKRDGTTEQAIMPITDLKRPSVIDYHEKEEYIYYAE-----LTSYVIERRKMFGRG 389 (440)
Q Consensus 318 ~~~~~~l~~~~~~---~~~I~~i~~~~~~~~~~~~~~~~~~~~p~~l~~d~~~~~vy~~d-----~~~~~I~r~~~~g~~ 389 (440)
+.||+++... ...-..++.|+........+|.........| ++..++.||+.= ...+.|++.+.+|+.
T Consensus 233 ---~~yl~va~~~~~g~~~~l~VS~D~G~tf~~a~fP~~~~~~~ytI-ldss~~~Vfl~V~~~~~~~~G~Ly~Sds~Gt~ 308 (685)
T 3f6k_A 233 ---GRFLFASVMADKDTTRRIHVSTDQGDTWSMAQLPSVGQEQFYSI-LAANDDMVFMHVDEPGDTGFGTIFTSDDRGIV 308 (685)
T ss_dssp ---TTEEEEEEECTTSSCEEEEEESSTTSSCEECBSCCBCTTCCEEE-EEECSSCEEEEEECTTCCSEEEEEEECTTSCB
T ss_pred ---eeEEEEEEecCCCceEEEEEECcCCcceeEeeCCCcCccceEEE-EcCCCCeEEEEEEccCCCceeEEEEeCCCCCE
Confidence 5777776431 1122235566331333333443222222333 566677777642 234678888888865
Q ss_pred eEE
Q psy14258 390 KEV 392 (440)
Q Consensus 390 ~~~ 392 (440)
-..
T Consensus 309 F~~ 311 (685)
T 3f6k_A 309 YSK 311 (685)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 382
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=20.12 E-value=6.3e+02 Score=24.86 Aligned_cols=66 Identities=14% Similarity=0.189 Sum_probs=41.4
Q ss_pred CCEEEEEeCCCCcEEEEEc-cCCCcEEEecCCcc-C------ceeeeeEecCEEEEEecCCCeEEEEeccCCCceE
Q psy14258 228 TKHVYWVDTYLDFIDRINY-DGTDRKTIRKGFPV-Q------NLYDITVFENNLFVTSWRNQSIIRVNKFNSDDYE 295 (440)
Q Consensus 228 ~~~ly~~d~~~~~i~~~~~-dG~~~~~i~~~~~~-~------~p~gl~~~~~~ly~td~~~~~i~~~~~~~g~~~~ 295 (440)
+++||++.... .+..++. +|..+-........ . ...++++.++.||+... .+.|+.++..+|+..=
T Consensus 68 ~g~vyv~~~~~-~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~-dg~l~AlD~~TG~~~W 141 (582)
T 1flg_A 68 DGVIYVTASYS-RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL-DASVVALNKNTGKVVW 141 (582)
T ss_dssp TTEEEEEETTT-EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET-TTEEEEEESSSCCEEE
T ss_pred CCEEEEEcCCC-CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC-CCEEEEEECCCCCEEe
Confidence 67778776533 3777776 34433332221100 0 12567889999999864 6789999998887653
Done!