Query psy14259
Match_columns 79
No_of_seqs 103 out of 632
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 23:27:14 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a5s_A Dipeptidyl peptidase 4 99.3 7.3E-13 2.5E-17 102.3 5.5 56 22-78 112-168 (740)
2 1z68_A Fibroblast activation p 99.0 1.1E-10 3.6E-15 88.5 4.2 56 23-79 111-167 (719)
3 1xfd_A DIP, dipeptidyl aminope 99.0 1.8E-10 6.3E-15 86.6 4.9 72 7-79 99-171 (723)
4 2ecf_A Dipeptidyl peptidase IV 98.7 2.1E-08 7.1E-13 75.8 5.9 57 22-79 152-208 (741)
5 2z3z_A Dipeptidyl aminopeptida 98.4 4.1E-07 1.4E-11 68.5 6.3 54 23-79 122-180 (706)
6 2gop_A Trilobed protease; beta 96.3 0.007 2.4E-07 41.0 5.3 37 23-60 60-102 (347)
7 3pe7_A Oligogalacturonate lyas 95.3 0.019 6.6E-07 39.3 4.0 35 26-61 40-78 (388)
8 3c5m_A Oligogalacturonate lyas 95.3 0.043 1.5E-06 37.3 5.8 38 24-62 38-79 (396)
9 3c5m_A Oligogalacturonate lyas 95.0 0.067 2.3E-06 36.4 6.2 34 26-60 85-119 (396)
10 3pe7_A Oligogalacturonate lyas 94.9 0.13 4.3E-06 35.2 7.3 34 26-60 85-119 (388)
11 2gop_A Trilobed protease; beta 94.3 0.073 2.5E-06 35.9 4.9 17 24-40 106-122 (347)
12 1k32_A Tricorn protease; prote 93.8 0.12 4.2E-06 41.3 6.0 51 7-61 41-98 (1045)
13 2ojh_A Uncharacterized protein 93.7 0.16 5.5E-06 32.4 5.5 37 22-59 42-79 (297)
14 2ecf_A Dipeptidyl peptidase IV 93.6 0.08 2.7E-06 39.8 4.5 36 24-60 111-149 (741)
15 2hqs_A Protein TOLB; TOLB, PAL 93.5 0.31 1E-05 34.9 7.2 38 23-61 224-265 (415)
16 2hqs_A Protein TOLB; TOLB, PAL 92.7 0.46 1.6E-05 34.0 7.2 40 22-62 267-310 (415)
17 3azo_A Aminopeptidase; POP fam 92.4 0.2 6.7E-06 37.2 5.0 37 23-59 131-183 (662)
18 1xfd_A DIP, dipeptidyl aminope 92.1 0.5 1.7E-05 35.3 6.8 37 23-60 62-108 (723)
19 2ojh_A Uncharacterized protein 91.5 0.62 2.1E-05 29.6 6.0 37 22-59 85-126 (297)
20 4a5s_A Dipeptidyl peptidase 4 91.0 0.33 1.1E-05 37.3 5.0 55 5-60 42-109 (740)
21 2xdw_A Prolyl endopeptidase; a 89.7 0.39 1.3E-05 36.6 4.4 36 23-59 126-167 (710)
22 3o4h_A Acylamino-acid-releasin 89.5 0.34 1.2E-05 35.6 3.9 36 25-61 153-193 (582)
23 1yr2_A Prolyl oligopeptidase; 88.6 0.58 2E-05 36.0 4.7 35 23-58 164-204 (741)
24 1z68_A Fibroblast activation p 88.3 0.78 2.7E-05 34.4 5.2 26 24-49 62-97 (719)
25 3dw8_B Serine/threonine-protei 88.1 0.62 2.1E-05 32.1 4.2 26 23-48 418-443 (447)
26 3iuj_A Prolyl endopeptidase; h 87.5 0.69 2.4E-05 35.5 4.5 36 23-59 130-171 (693)
27 2z3z_A Dipeptidyl aminopeptida 87.0 2.2 7.6E-05 31.8 6.9 29 21-49 257-291 (706)
28 3azo_A Aminopeptidase; POP fam 86.5 1.2 4.2E-05 32.9 5.3 38 23-60 189-238 (662)
29 4ggc_A P55CDC, cell division c 86.4 4.2 0.00014 26.3 7.3 50 5-56 8-58 (318)
30 4h5i_A Guanine nucleotide-exch 86.2 3 0.0001 29.0 6.9 31 23-53 178-208 (365)
31 1k32_A Tricorn protease; prote 84.2 4.1 0.00014 32.5 7.6 37 22-59 379-416 (1045)
32 3o4h_A Acylamino-acid-releasin 83.2 5.8 0.0002 28.9 7.5 37 23-61 196-235 (582)
33 1pgu_A Actin interacting prote 82.9 3.7 0.00013 29.3 6.2 31 20-50 17-47 (615)
34 2xe4_A Oligopeptidase B; hydro 82.1 1.8 6.1E-05 33.8 4.7 27 23-49 175-208 (751)
35 2bkl_A Prolyl endopeptidase; m 80.6 2.1 7E-05 32.6 4.4 27 23-49 122-154 (695)
36 2xdw_A Prolyl endopeptidase; a 80.1 2.5 8.5E-05 32.1 4.7 19 24-42 173-191 (710)
37 1pby_B Quinohemoprotein amine 79.1 4 0.00014 26.5 5.0 31 24-56 137-167 (337)
38 2bkl_A Prolyl endopeptidase; m 78.8 2.8 9.6E-05 31.8 4.7 25 25-49 171-209 (695)
39 4gq1_A NUP37; propeller, trans 78.3 3.1 0.0001 29.1 4.5 26 23-48 361-386 (393)
40 3iuj_A Prolyl endopeptidase; h 76.8 13 0.00046 28.3 8.0 38 24-61 236-279 (693)
41 1nr0_A Actin interacting prote 76.4 5.3 0.00018 29.7 5.5 30 20-49 17-46 (611)
42 4e54_B DNA damage-binding prot 76.2 4.5 0.00015 28.4 4.9 25 24-48 403-427 (435)
43 2xe4_A Oligopeptidase B; hydro 75.7 1.5 5.2E-05 34.2 2.5 25 25-49 224-254 (751)
44 1pby_B Quinohemoprotein amine 75.2 12 0.0004 24.3 6.4 25 24-49 243-267 (337)
45 1jmx_B Amine dehydrogenase; ox 74.9 7.6 0.00026 25.4 5.5 31 24-57 150-180 (349)
46 1yr2_A Prolyl oligopeptidase; 74.2 5.5 0.00019 30.5 5.2 37 24-61 270-315 (741)
47 3ei3_B DNA damage-binding prot 74.1 6.6 0.00022 26.6 5.1 28 21-48 352-379 (383)
48 1l0q_A Surface layer protein; 73.6 13 0.00045 24.9 6.6 34 23-57 75-110 (391)
49 3zwl_B Eukaryotic translation 73.4 16 0.00055 23.8 7.1 30 20-49 31-61 (369)
50 4gga_A P55CDC, cell division c 69.7 24 0.00081 24.5 7.3 43 7-49 133-176 (420)
51 1k8k_C P40, ARP2/3 complex 41 68.5 5.7 0.0002 26.3 3.7 29 21-49 8-37 (372)
52 3s25_A Hypothetical 7-bladed b 65.8 8.4 0.00029 27.1 4.3 35 28-63 110-149 (302)
53 3vgz_A Uncharacterized protein 65.1 26 0.00089 22.9 6.8 26 24-49 43-76 (353)
54 4gga_A P55CDC, cell division c 64.9 32 0.0011 23.8 7.4 50 6-57 89-139 (420)
55 1jmx_B Amine dehydrogenase; ox 64.5 21 0.00073 23.2 5.9 26 23-49 256-282 (349)
56 1erj_A Transcriptional repress 64.2 17 0.00059 25.1 5.7 28 21-48 64-91 (393)
57 2mad_H Methylamine dehydrogena 63.0 19 0.00064 25.6 5.8 34 24-58 320-356 (373)
58 3i2n_A WD repeat-containing pr 62.0 16 0.00055 23.8 4.9 30 20-49 17-51 (357)
59 4h5i_A Guanine nucleotide-exch 61.2 27 0.00093 24.0 6.2 27 23-49 135-164 (365)
60 2vdu_B TRNA (guanine-N(7)-)-me 59.7 9.9 0.00034 26.7 3.8 25 24-48 7-31 (450)
61 3lrv_A PRE-mRNA-splicing facto 59.6 24 0.00083 23.6 5.6 29 21-49 214-242 (343)
62 2pm9_A Protein WEB1, protein t 59.1 21 0.0007 24.0 5.2 30 20-49 66-96 (416)
63 3jrp_A Fusion protein of prote 58.8 22 0.00075 23.3 5.2 30 20-49 255-285 (379)
64 1l0q_A Surface layer protein; 58.5 36 0.0012 22.7 6.3 27 23-49 33-61 (391)
65 1gxr_A ESG1, transducin-like e 57.8 13 0.00044 24.0 3.8 29 21-49 51-79 (337)
66 3vgz_A Uncharacterized protein 57.2 37 0.0013 22.1 6.6 32 24-56 143-177 (353)
67 1gxr_A ESG1, transducin-like e 57.1 32 0.0011 22.1 5.7 29 21-49 141-170 (337)
68 3s25_A Hypothetical 7-bladed b 56.7 14 0.00047 26.0 4.1 46 28-75 20-68 (302)
69 3u4y_A Uncharacterized protein 55.6 40 0.0014 21.9 6.5 24 26-49 44-69 (331)
70 3scy_A Hypothetical bacterial 55.0 17 0.00058 24.4 4.2 25 23-47 51-80 (361)
71 1yfq_A Cell cycle arrest prote 54.8 21 0.00072 23.2 4.6 30 19-48 9-39 (342)
72 4aez_A CDC20, WD repeat-contai 53.3 51 0.0017 22.5 8.2 30 20-49 133-163 (401)
73 4g56_B MGC81050 protein; prote 53.2 20 0.00067 24.6 4.4 30 20-49 41-77 (357)
74 1ri6_A Putative isomerase YBHE 53.0 23 0.00079 22.9 4.5 27 23-49 130-158 (343)
75 3jrp_A Fusion protein of prote 51.4 21 0.00072 23.4 4.1 28 22-49 12-40 (379)
76 3u4y_A Uncharacterized protein 50.6 49 0.0017 21.5 7.0 26 24-49 178-205 (331)
77 3odt_A Protein DOA1; ubiquitin 50.2 36 0.0012 21.6 5.0 28 22-49 267-294 (313)
78 3hfq_A Uncharacterized protein 50.2 52 0.0018 21.7 6.2 36 24-59 288-326 (347)
79 3dwl_C Actin-related protein 2 50.1 4.1 0.00014 27.4 0.4 27 23-49 13-40 (377)
80 3mkq_A Coatomer beta'-subunit; 49.6 22 0.00077 26.5 4.4 26 23-48 358-383 (814)
81 3bws_A Protein LP49; two-domai 48.6 43 0.0015 22.7 5.5 26 23-48 402-429 (433)
82 3dwl_C Actin-related protein 2 48.4 33 0.0011 22.8 4.8 30 20-49 54-84 (377)
83 4g56_B MGC81050 protein; prote 48.2 28 0.00095 23.8 4.5 33 21-53 311-345 (357)
84 3bws_A Protein LP49; two-domai 47.7 58 0.002 22.0 6.0 27 23-49 346-388 (433)
85 3k26_A Polycomb protein EED; W 46.0 40 0.0014 21.8 4.8 28 21-48 335-363 (366)
86 2aq5_A Coronin-1A; WD40 repeat 45.1 70 0.0024 21.7 6.5 30 20-49 175-205 (402)
87 3dw8_B Serine/threonine-protei 44.9 26 0.00088 23.8 3.9 30 20-49 176-205 (447)
88 3vu4_A KMHSV2; beta-propeller 44.9 41 0.0014 22.9 4.9 30 20-49 239-269 (355)
89 2j04_A TAU60, YPL007P, hypothe 44.8 30 0.001 27.4 4.7 28 21-48 85-113 (588)
90 2oiz_A Aromatic amine dehydrog 44.6 75 0.0026 21.9 7.0 29 24-53 307-335 (361)
91 3f3f_A Nucleoporin SEH1; struc 44.4 58 0.002 20.6 6.4 30 20-49 305-335 (351)
92 1pgu_A Actin interacting prote 44.1 74 0.0025 22.4 6.3 30 20-49 487-517 (615)
93 3mkq_A Coatomer beta'-subunit; 43.6 98 0.0033 23.0 7.2 28 22-49 14-42 (814)
94 3vu4_A KMHSV2; beta-propeller 43.0 26 0.00089 23.9 3.7 29 20-48 18-46 (355)
95 4aez_A CDC20, WD repeat-contai 43.0 37 0.0013 23.2 4.5 28 22-49 304-334 (401)
96 4ggc_A P55CDC, cell division c 42.5 64 0.0022 20.5 6.8 43 7-49 53-96 (318)
97 1jof_A Carboxy-CIS,CIS-muconat 41.7 39 0.0013 23.0 4.4 27 22-48 145-173 (365)
98 3bg1_A Protein SEC13 homolog; 41.5 57 0.002 21.6 5.1 28 22-49 263-291 (316)
99 1erj_A Transcriptional repress 40.9 85 0.0029 21.5 6.4 27 23-49 125-152 (393)
100 1nir_A Nitrite reductase; hemo 40.7 15 0.00053 27.4 2.3 30 22-51 479-514 (543)
101 2w18_A PALB2, fancn, partner a 40.2 31 0.0011 25.6 3.9 25 24-48 329-354 (356)
102 2aq5_A Coronin-1A; WD40 repeat 39.2 38 0.0013 23.1 4.0 29 21-49 220-252 (402)
103 2oit_A Nucleoporin 214KDA; NH2 37.0 32 0.0011 24.7 3.5 28 22-49 193-221 (434)
104 3vl1_A 26S proteasome regulato 36.9 74 0.0025 21.3 5.2 30 20-49 138-168 (420)
105 3mmy_A MRNA export factor; mRN 36.8 83 0.0029 20.2 6.0 36 21-57 86-122 (368)
106 3frx_A Guanine nucleotide-bind 36.8 54 0.0019 21.8 4.4 26 23-48 239-264 (319)
107 3zwl_B Eukaryotic translation 35.7 87 0.003 20.1 6.6 29 21-49 74-103 (369)
108 3ow8_A WD repeat-containing pr 35.1 79 0.0027 21.1 5.1 27 23-49 124-151 (321)
109 2ymu_A WD-40 repeat protein; u 34.2 52 0.0018 23.3 4.2 28 21-48 57-85 (577)
110 1dgw_X Canavalin; duplicated s 34.2 51 0.0017 19.1 3.5 24 24-47 48-71 (79)
111 2xzm_R RACK1; ribosome, transl 34.0 60 0.0021 21.6 4.3 27 23-49 257-283 (343)
112 2hes_X YDR267CP; beta-propelle 32.7 68 0.0023 21.4 4.4 29 21-49 107-136 (330)
113 4a11_B DNA excision repair pro 32.5 89 0.0031 20.5 4.9 30 20-49 42-73 (408)
114 4ery_A WD repeat-containing pr 32.2 1E+02 0.0035 19.9 6.2 29 21-49 23-52 (312)
115 1qks_A Cytochrome CD1 nitrite 31.3 26 0.0009 26.7 2.3 29 23-51 504-538 (567)
116 2pm7_B Protein transport prote 30.7 1.1E+02 0.0038 19.8 6.0 29 21-49 254-283 (297)
117 4gqb_B Methylosome protein 50; 30.6 1.1E+02 0.0038 20.9 5.3 28 21-48 127-155 (344)
118 3c75_H MADH, methylamine dehyd 30.2 1E+02 0.0034 22.8 5.3 34 24-58 372-409 (426)
119 2pbi_B Guanine nucleotide-bind 29.2 1.1E+02 0.0039 20.6 5.1 31 20-50 63-94 (354)
120 4aow_A Guanine nucleotide-bind 28.5 1.2E+02 0.004 19.4 6.2 27 23-49 258-284 (340)
121 2ghs_A AGR_C_1268P; regucalcin 28.5 1.4E+02 0.0046 20.1 5.7 25 24-48 51-77 (326)
122 3sfz_A APAF-1, apoptotic pepti 28.2 1.1E+02 0.0037 24.3 5.4 28 23-50 800-827 (1249)
123 3iz6_a 40S ribosomal protein R 28.1 84 0.0029 21.4 4.3 29 21-49 66-95 (380)
124 3dr2_A Exported gluconolactona 27.7 1.3E+02 0.0043 19.8 5.1 6 29-34 263-268 (305)
125 3fm0_A Protein CIAO1; WDR39,SG 27.3 1.4E+02 0.0048 19.9 6.4 29 20-48 60-89 (345)
126 3g4e_A Regucalcin; six bladed 27.3 1.3E+02 0.0046 19.6 5.8 27 22-48 13-41 (297)
127 1sq9_A Antiviral protein SKI8; 26.7 1.4E+02 0.0048 19.7 5.3 29 21-49 233-265 (397)
128 1mda_H Methylamine dehydrogena 26.7 77 0.0026 22.8 4.1 38 24-62 316-357 (368)
129 1got_B GT-beta; complex (GTP-b 25.2 1.5E+02 0.0052 19.6 6.4 27 23-49 272-299 (340)
130 1xip_A Nucleoporin NUP159; bet 25.2 58 0.002 23.9 3.2 26 22-48 163-188 (388)
131 3sjl_D Methylamine dehydrogena 25.1 1.3E+02 0.0045 22.1 5.1 40 25-64 334-376 (386)
132 1r5m_A SIR4-interacting protei 24.9 1.5E+02 0.0051 19.4 6.3 29 21-49 247-276 (425)
133 3dm0_A Maltose-binding peripla 23.7 1.7E+02 0.0058 21.7 5.5 28 22-49 603-630 (694)
134 2od0_A Hypothetical protein VP 23.7 49 0.0017 19.7 2.2 22 28-49 29-50 (105)
135 3das_A Putative oxidoreductase 21.9 93 0.0032 22.5 3.7 32 32-63 141-184 (347)
136 2j04_A TAU60, YPL007P, hypothe 21.7 80 0.0028 24.9 3.5 28 21-49 182-209 (588)
137 2bw2_A Bypass of forespore C; 20.5 28 0.00096 22.9 0.6 20 53-72 72-91 (140)
138 3d33_A Domain of unknown funct 20.4 1.5E+02 0.0051 18.2 4.0 24 36-59 32-56 (108)
No 1
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.35 E-value=7.3e-13 Score=102.34 Aligned_cols=56 Identities=36% Similarity=0.791 Sum_probs=50.4
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEEeccCCCc-eeEecccceeeeec
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSPSATLQDIYRLSNTGSE-VVSNGVPDWLYQAR 78 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~lT~dG~~-~i~nG~~DWvYeEE 78 (79)
..++.++|||+|+.|||+.++|||+.+. ..+..+|||.+|.. .++||.+||||+||
T Consensus 112 ~~~~~~~~SPdG~~la~~~~~~i~~~~~-~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 112 NNTQWVTWSPVGHKLAYVWNNDIYVKIE-PNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp TTEEEEEECSSTTCEEEEETTEEEEESS-TTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred CcceeeEECCCCCEEEEEECCeEEEEEC-CCCceEEEcCCCCccceecCcccccccch
Confidence 3589999999999999999999999974 44568999999987 79999999999998
No 2
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.05 E-value=1.1e-10 Score=88.50 Aligned_cols=56 Identities=30% Similarity=0.752 Sum_probs=49.3
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEEeccCCCc-eeEecccceeeeecC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPSATLQDIYRLSNTGSE-VVSNGVPDWLYQARE 79 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~lT~dG~~-~i~nG~~DWvYeEEf 79 (79)
.+..++|||+|+.|||+.+++||+++. .+++..++|.+|.. .|+||.+||||+||+
T Consensus 111 ~~~~~~~SPDG~~la~~~~~~i~~~~~-~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~ 167 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVYQNNIYLKQR-PGDPPFQITFNGRENKIFNGIPDWVYEEEM 167 (719)
T ss_dssp SBCCEEECSSTTCEEEEETTEEEEESS-TTSCCEECCCCCBTTTEEESSCCHHHHHHT
T ss_pred ccccceECCCCCEEEEEECCeEEEEeC-CCCCcEEEecCCCcCCeEcccccceeeeec
Confidence 478899999999999999999999974 45568899988877 699999999999983
No 3
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.03 E-value=1.8e-10 Score=86.63 Aligned_cols=72 Identities=28% Similarity=0.603 Sum_probs=54.5
Q ss_pred CccceeecccCCCCCCCeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEEeccCCCc-eeEecccceeeeecC
Q psy14259 7 PIRAEKQQNINDHEAPYLQHISWAPVDNALAFVYNRDVYYSPSATLQDIYRLSNTGSE-VVSNGVPDWLYQARE 79 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~lT~dG~~-~i~nG~~DWvYeEEf 79 (79)
..+..+++.........+..++|||+|+.|||+.+++||+++. .+++.+++|.++.. .+++|++||+|+||.
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~-~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH-VGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS-SSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEEC-CCCceEEEecCCCCCceECcccceeEEEEe
Confidence 3344433333333333477899999999999999999999974 45568899988765 789999999999983
No 4
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.70 E-value=2.1e-08 Score=75.81 Aligned_cols=57 Identities=14% Similarity=0.347 Sum_probs=50.1
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEEeccCCCceeEecccceeeeecC
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSPSATLQDIYRLSNTGSEVVSNGVPDWLYQARE 79 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~lT~dG~~~i~nG~~DWvYeEEf 79 (79)
..+..++|||+|+.|||+.+++||+++ ..+++..++|.++...+++|.+||+|+|||
T Consensus 152 ~~~~~~~~SPDG~~la~~~~~~i~~~d-~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~ 208 (741)
T 2ecf_A 152 GFATDAKLSPKGGFVSFIRGRNLWVID-LASGRQMQLTADGSTTIGNGIAEFVADEEM 208 (741)
T ss_dssp SCEEEEEECTTSSEEEEEETTEEEEEE-TTTTEEEECCCCCCSSEEESCCCHHHHHHS
T ss_pred cccccccCCCCCCEEEEEeCCcEEEEe-cCCCCEEEeccCCccceeccccceeeeecc
Confidence 347889999999999999999999997 445668899998888899999999999875
No 5
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.42 E-value=4.1e-07 Score=68.52 Aligned_cols=54 Identities=19% Similarity=0.329 Sum_probs=47.4
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcCCCC-----CCeEEeccCCCceeEecccceeeeecC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPSATL-----QDIYRLSNTGSEVVSNGVPDWLYQARE 79 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~~~~-----~~~~~lT~dG~~~i~nG~~DWvYeEEf 79 (79)
.+..++|||+|+.|||+.+++||+.+. .+ ++..++|.++...++||.+ +||||+
T Consensus 122 ~~~~~~~SpdG~~la~~~~~~i~v~~~-~~~~~~~g~~~~~~~~~~~~~~~g~~--~~~ee~ 180 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYVRNHNLYIARG-GKLGEGMSRAIAVTIDGTETLVYGQA--VHQREF 180 (706)
T ss_dssp CCTTCEECTTSSEEEEEETTEEEEEEC-BCTTSCCCCCEESCSCCBTTEEESSC--CGGGCT
T ss_pred cccCCcCCCCCCEEEEEECCeEEEEec-CcccccCCCcEEeccCCCCCeEcccc--hhhhhc
Confidence 467899999999999999999999974 44 5688999998888999999 999885
No 6
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=96.32 E-value=0.007 Score=41.04 Aligned_cols=37 Identities=8% Similarity=0.135 Sum_probs=27.8
Q ss_pred CeeeeEEccCCCeEEEEEcCC------EEEEcCCCCCCeEEecc
Q psy14259 23 YLQHISWAPVDNALAFVYNRD------VYYSPSATLQDIYRLSN 60 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nn------ly~~~~~~~~~~~~lT~ 60 (79)
....+.|||+|+.|||+.+.. ||+.+. .+++..++|.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~-~~g~~~~l~~ 102 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADL-ETLSSKKILE 102 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEET-TTTEEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEEC-CCCceEEEEc
Confidence 356789999999999997643 999863 4455666764
No 7
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.27 E-value=0.019 Score=39.32 Aligned_cols=35 Identities=14% Similarity=0.070 Sum_probs=27.1
Q ss_pred eeEEccCCCeEEEEEc-CC---EEEEcCCCCCCeEEeccC
Q psy14259 26 HISWAPVDNALAFVYN-RD---VYYSPSATLQDIYRLSNT 61 (79)
Q Consensus 26 ~a~wsP~g~~lafV~~-nn---ly~~~~~~~~~~~~lT~d 61 (79)
.++|||+|+.|+|+.+ +. ||+.+. ..++..++|..
T Consensus 40 ~~~~SpDg~~l~~~~~~~g~~~l~~~d~-~~g~~~~lt~~ 78 (388)
T 3pe7_A 40 QKCFTRDGSKLLFGGAFDGPWNYYLLDL-NTQVATQLTEG 78 (388)
T ss_dssp SCCBCTTSCEEEEEECTTSSCEEEEEET-TTCEEEECCCS
T ss_pred CccCCCCCCEEEEEEcCCCCceEEEEeC-CCCceEEeeeC
Confidence 3789999999999987 33 999974 45557777754
No 8
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.26 E-value=0.043 Score=37.32 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.0
Q ss_pred eeeeEEccCCCeEEEEEcC----CEEEEcCCCCCCeEEeccCC
Q psy14259 24 LQHISWAPVDNALAFVYNR----DVYYSPSATLQDIYRLSNTG 62 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~n----nly~~~~~~~~~~~~lT~dG 62 (79)
...++|||+|+.|+|+.+. +||+.+ ..+++..++|...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d-~~~~~~~~l~~~~ 79 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLN-LETQQAVQLTEGK 79 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEE-TTTTEEEECCCSS
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEE-CCCCcEEEeecCC
Confidence 5667999999999999876 799886 3445566776543
No 9
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.03 E-value=0.067 Score=36.36 Aligned_cols=34 Identities=9% Similarity=-0.087 Sum_probs=26.8
Q ss_pred eeEEccCCCeEEEEEcCC-EEEEcCCCCCCeEEecc
Q psy14259 26 HISWAPVDNALAFVYNRD-VYYSPSATLQDIYRLSN 60 (79)
Q Consensus 26 ~a~wsP~g~~lafV~~nn-ly~~~~~~~~~~~~lT~ 60 (79)
.+.|||+|+.|+|+..++ ||+.+ ...++..+++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d-~~~~~~~~~~~ 119 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVD-LETLEEQVIYT 119 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEE-TTTCCEEEEEE
T ss_pred cceECCCCCEEEEEEcCCcEEEEE-CCCCCcEEEEe
Confidence 378999999999998865 99997 44455667775
No 10
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=94.90 E-value=0.13 Score=35.18 Aligned_cols=34 Identities=15% Similarity=0.082 Sum_probs=25.7
Q ss_pred eeEEccCCCeEEEEEcC-CEEEEcCCCCCCeEEecc
Q psy14259 26 HISWAPVDNALAFVYNR-DVYYSPSATLQDIYRLSN 60 (79)
Q Consensus 26 ~a~wsP~g~~lafV~~n-nly~~~~~~~~~~~~lT~ 60 (79)
.+.|||+|+.|+|+.++ .||+.+. ..++..+++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~-~~g~~~~~~~ 119 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDL-ATLEENVVYQ 119 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEET-TTCCEEEEEE
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEEC-CCCcceeeee
Confidence 56899999999999964 7998864 4454555554
No 11
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=94.27 E-value=0.073 Score=35.93 Aligned_cols=17 Identities=18% Similarity=0.417 Sum_probs=15.7
Q ss_pred eeeeEEccCCCeEEEEE
Q psy14259 24 LQHISWAPVDNALAFVY 40 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~ 40 (79)
+..+.|||+|+.|+|+.
T Consensus 106 ~~~~~wspdg~~l~~~~ 122 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVG 122 (347)
T ss_dssp EEEEEECTTSSEEEEEE
T ss_pred ccceeECCCCCEEEEEE
Confidence 67889999999999996
No 12
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=93.82 E-value=0.12 Score=41.30 Aligned_cols=51 Identities=14% Similarity=0.205 Sum_probs=34.3
Q ss_pred CccceeecccCCCCCCCeeeeEEccCCCeEEEEEcC-------CEEEEcCCCCCCeEEeccC
Q psy14259 7 PIRAEKQQNINDHEAPYLQHISWAPVDNALAFVYNR-------DVYYSPSATLQDIYRLSNT 61 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~q~a~wsP~g~~lafV~~n-------nly~~~~~~~~~~~~lT~d 61 (79)
..+..+++.. ....+..++|||+|+.|||+... +||+++. .+++..+||..
T Consensus 41 ~gg~~~~lt~---~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~-~~g~~~~lt~~ 98 (1045)
T 1k32_A 41 KSGSTRKIVS---NLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNG-ENGEIKRITYF 98 (1045)
T ss_dssp TTCCEEEEEC---SSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEET-TTTEEEECCCC
T ss_pred CCCcEEEeee---CCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEEC-CCCCeEEcccC
Confidence 3444444432 23457889999999999999643 7999974 44446677653
No 13
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=93.72 E-value=0.16 Score=32.40 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=28.9
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEcCCCC-CCeEEec
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSPSATL-QDIYRLS 59 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~~~~~-~~~~~lT 59 (79)
..+..+.|||+|+.|++..++.|++.+. .. .+..+++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~-~~~~~~~~~~ 79 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSL-AGDPSPEKVD 79 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEES-SSCCSCEECC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeC-CCCCCceEec
Confidence 3477899999999999999999999974 33 3345554
No 14
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=93.65 E-value=0.08 Score=39.81 Aligned_cols=36 Identities=17% Similarity=0.421 Sum_probs=28.0
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEcCCCCC---CeEEecc
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSPSATLQ---DIYRLSN 60 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~~~~~~---~~~~lT~ 60 (79)
+..++|||+|+.|+|..++.||+++. .++ ...+++.
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~-~~~~~~~~~~l~~ 149 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDL-KQEGKAAVRQLTH 149 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEES-SSCSTTSCCBCCC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEEC-CCCCcceEEEccc
Confidence 56789999999999999999999974 333 3445553
No 15
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.47 E-value=0.31 Score=34.95 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=28.1
Q ss_pred CeeeeEEccCCCeEEEEE----cCCEEEEcCCCCCCeEEeccC
Q psy14259 23 YLQHISWAPVDNALAFVY----NRDVYYSPSATLQDIYRLSNT 61 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~----~nnly~~~~~~~~~~~~lT~d 61 (79)
.+..++|||+|+.|+|+. +.+||+.+. ..++..+++..
T Consensus 224 ~~~~~~~spdg~~la~~~~~~g~~~i~~~d~-~~~~~~~l~~~ 265 (415)
T 2hqs_A 224 HNGAPAFSPDGSKLAFALSKTGSLNLYVMDL-ASGQIRQVTDG 265 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEET-TTCCEEECCCC
T ss_pred cccCEEEcCCCCEEEEEEecCCCceEEEEEC-CCCCEEeCcCC
Confidence 477899999999999997 345999974 34445666643
No 16
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=92.71 E-value=0.46 Score=34.01 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=29.4
Q ss_pred CCeeeeEEccCCCeEEEEEcC----CEEEEcCCCCCCeEEeccCC
Q psy14259 22 PYLQHISWAPVDNALAFVYNR----DVYYSPSATLQDIYRLSNTG 62 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~n----nly~~~~~~~~~~~~lT~dG 62 (79)
.....+.|||+|+.|+|+.+. .||+.+. ..++..++|..+
T Consensus 267 ~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~-~~~~~~~l~~~~ 310 (415)
T 2hqs_A 267 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI-NGGAPQRITWEG 310 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEET-TSSCCEECCCSS
T ss_pred CcccceEECCCCCEEEEEECCCCCcEEEEEEC-CCCCEEEEecCC
Confidence 346788999999999999875 5998863 344456666544
No 17
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=92.44 E-value=0.2 Score=37.23 Aligned_cols=37 Identities=14% Similarity=0.021 Sum_probs=27.6
Q ss_pred CeeeeEEccCCCeEEEEEc-----------CCEEEEcCCCC-----CCeEEec
Q psy14259 23 YLQHISWAPVDNALAFVYN-----------RDVYYSPSATL-----QDIYRLS 59 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~-----------nnly~~~~~~~-----~~~~~lT 59 (79)
....+.|||+|+.|+|+.. +.||+++.... +...+||
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~ 183 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELS 183 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESS
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEE
Confidence 4667899999999999976 37999974331 4456676
No 18
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=92.06 E-value=0.5 Score=35.26 Aligned_cols=37 Identities=19% Similarity=0.071 Sum_probs=27.6
Q ss_pred CeeeeEEccCCCeEEEEEc----------CCEEEEcCCCCCCeEEecc
Q psy14259 23 YLQHISWAPVDNALAFVYN----------RDVYYSPSATLQDIYRLSN 60 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~----------nnly~~~~~~~~~~~~lT~ 60 (79)
.+..++|||+|+.|||..+ .+||+++. .+++..+++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~-~~~~~~~l~~ 108 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI-PHGDPQSLDP 108 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES-SSCCCEECCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEEC-CCCceEeccC
Confidence 3678999999999999976 67888863 3444455653
No 19
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.46 E-value=0.62 Score=29.58 Aligned_cols=37 Identities=16% Similarity=0.084 Sum_probs=26.7
Q ss_pred CCeeeeEEccCCCeEEEEE-----cCCEEEEcCCCCCCeEEec
Q psy14259 22 PYLQHISWAPVDNALAFVY-----NRDVYYSPSATLQDIYRLS 59 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~-----~nnly~~~~~~~~~~~~lT 59 (79)
..+..++|||+|+.|+++. ...||..+. ......+++
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 126 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPS-TGGTPRLMT 126 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEET-TCCCCEECC
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEEC-CCCceEEee
Confidence 4467799999999999998 467888863 233344444
No 20
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=90.99 E-value=0.33 Score=37.29 Aligned_cols=55 Identities=9% Similarity=-0.090 Sum_probs=33.9
Q ss_pred cCCccceeecccCCCC-CCCeee--eEEccCCCeEEEEEc----------CCEEEEcCCCCCCeEEecc
Q psy14259 5 RLPIRAEKQQNINDHE-APYLQH--ISWAPVDNALAFVYN----------RDVYYSPSATLQDIYRLSN 60 (79)
Q Consensus 5 ~~~~~~~~~~~~~~~~-~~~~q~--a~wsP~g~~lafV~~----------nnly~~~~~~~~~~~~lT~ 60 (79)
++.++..+++...... ...+.. ..|||+|+.|+|..+ .++|+.+ ..+++..+||.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d-~~~~~~~~l~~ 109 (740)
T 4a5s_A 42 NAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD-LNKRQLITEER 109 (740)
T ss_dssp ETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE-TTTTEECCSSC
T ss_pred ECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE-CCCCcEEEccc
Confidence 3445555544433321 112223 799999999999998 6888886 44444555654
No 21
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=89.70 E-value=0.39 Score=36.61 Aligned_cols=36 Identities=6% Similarity=0.006 Sum_probs=26.5
Q ss_pred CeeeeEEccCCCeEEEEEcC------CEEEEcCCCCCCeEEec
Q psy14259 23 YLQHISWAPVDNALAFVYNR------DVYYSPSATLQDIYRLS 59 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~n------nly~~~~~~~~~~~~lT 59 (79)
.+..+.|||+|+.|||..+. .||+++ ..+++..++|
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d-~~tg~~~~~~ 167 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMK-VDGAKELPDV 167 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEE-TTTTEEEEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEE-CCCCCCCccc
Confidence 46788999999999999763 699997 4444444433
No 22
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=89.52 E-value=0.34 Score=35.59 Aligned_cols=36 Identities=6% Similarity=-0.117 Sum_probs=27.0
Q ss_pred eeeEEccCCCeEEEEEc-----CCEEEEcCCCCCCeEEeccC
Q psy14259 25 QHISWAPVDNALAFVYN-----RDVYYSPSATLQDIYRLSNT 61 (79)
Q Consensus 25 q~a~wsP~g~~lafV~~-----nnly~~~~~~~~~~~~lT~d 61 (79)
..+.|||+|+.|||+.. ..||+.+ ..+++..+||..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d-~~~g~~~~l~~~ 193 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSN-LSSGGLRVFDSG 193 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEE-TTTCCCEEECCS
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEc-CCCCCceEeecC
Confidence 57889999999998864 4699997 344556677754
No 23
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=88.58 E-value=0.58 Score=35.96 Aligned_cols=35 Identities=11% Similarity=-0.037 Sum_probs=26.2
Q ss_pred CeeeeEEccCCCeEEEEEcC------CEEEEcCCCCCCeEEe
Q psy14259 23 YLQHISWAPVDNALAFVYNR------DVYYSPSATLQDIYRL 58 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~n------nly~~~~~~~~~~~~l 58 (79)
.+..+.|||+|+.|||..+. .||+.+. .+++..+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl-~tg~~~~~ 204 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGV-ADGKPLAD 204 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEET-TTCCEEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEEC-CCCCCCCc
Confidence 46788999999999999763 5999974 44444443
No 24
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=88.34 E-value=0.78 Score=34.42 Aligned_cols=26 Identities=8% Similarity=0.051 Sum_probs=22.4
Q ss_pred eeeeEEccCCCeEEEEEc----------CCEEEEcC
Q psy14259 24 LQHISWAPVDNALAFVYN----------RDVYYSPS 49 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~----------nnly~~~~ 49 (79)
+..++|||+|+.|||..+ ..||+++.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 567899999999999975 78999963
No 25
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=88.09 E-value=0.62 Score=32.14 Aligned_cols=26 Identities=23% Similarity=0.552 Sum_probs=23.6
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
.+..++|+|+|+.||....|+||+..
T Consensus 418 ~i~~~~~~p~~~~la~~~~~~~~~~~ 443 (447)
T 3dw8_B 418 KILHTAWHPKENIIAVATTNNLYIFQ 443 (447)
T ss_dssp CCCEEEECSSSSEEEEECSSCEEEEE
T ss_pred ceeEEEECCCCCEEEEEecceeeeec
Confidence 46679999999999999999999985
No 26
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=87.54 E-value=0.69 Score=35.49 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=26.1
Q ss_pred CeeeeEEccCCCeEEEEEc------CCEEEEcCCCCCCeEEec
Q psy14259 23 YLQHISWAPVDNALAFVYN------RDVYYSPSATLQDIYRLS 59 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~------nnly~~~~~~~~~~~~lT 59 (79)
.+..+.|||+|+.|||+.+ ..||+.+. .+++..+.+
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl-~tg~~~~~~ 171 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDV-ESKQPLETP 171 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEET-TTCSEEEEE
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEEC-CCCCCCccc
Confidence 4677899999999999975 35888864 444444443
No 27
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=86.95 E-value=2.2 Score=31.77 Aligned_cols=29 Identities=24% Similarity=0.422 Sum_probs=22.8
Q ss_pred CCCeeeeEEccCCCeEEEEEcC------CEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVYNR------DVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~n------nly~~~~ 49 (79)
...+..+.|||+|+.|++...+ .|++++.
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~ 291 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDA 291 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEET
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEEC
Confidence 3457789999999999997644 7888864
No 28
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.55 E-value=1.2 Score=32.90 Aligned_cols=38 Identities=8% Similarity=0.054 Sum_probs=27.0
Q ss_pred CeeeeEEccCCCeEEEEEc---------CCEEEEcCCCCC---CeEEecc
Q psy14259 23 YLQHISWAPVDNALAFVYN---------RDVYYSPSATLQ---DIYRLSN 60 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~---------nnly~~~~~~~~---~~~~lT~ 60 (79)
....+.|||+|+.|||+.. ++||+.+....+ ...+|+.
T Consensus 189 ~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 189 FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 4567899999999999973 369998743123 4556664
No 29
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.35 E-value=4.2 Score=26.31 Aligned_cols=50 Identities=20% Similarity=0.400 Sum_probs=33.7
Q ss_pred cCCccceeecccCCCC-CCCeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeE
Q psy14259 5 RLPIRAEKQQNINDHE-APYLQHISWAPVDNALAFVYNRDVYYSPSATLQDIY 56 (79)
Q Consensus 5 ~~~~~~~~~~~~~~~~-~~~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~ 56 (79)
-+|....+.+.-+... +-.+....|||++ .||.-.|+.|++++. ..++..
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg~D~tV~iWd~-~tg~~~ 58 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVALDNSVYLWSA-SSGDIL 58 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEEETTEEEEEET-TTCCEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEEeCCEEEEEEC-CCCCEE
Confidence 3566666666644433 2346778999975 888889999999973 334343
No 30
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=86.21 E-value=3 Score=29.05 Aligned_cols=31 Identities=6% Similarity=0.155 Sum_probs=25.8
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcCCCCC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPSATLQ 53 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~~~~~ 53 (79)
.+..++|||+|+.|+...++.+.++......
T Consensus 178 ~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~ 208 (365)
T 4h5i_A 178 EVKDLHFSTDGKVVAYITGSSLEVISTVTGS 208 (365)
T ss_dssp CCCEEEECTTSSEEEEECSSCEEEEETTTCC
T ss_pred ceEEEEEccCCceEEeccceeEEEEEeccCc
Confidence 4778999999999999999999888754433
No 31
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=84.23 E-value=4.1 Score=32.52 Aligned_cols=37 Identities=0% Similarity=-0.158 Sum_probs=27.8
Q ss_pred CCeeeeEEccCCCeEEEEEc-CCEEEEcCCCCCCeEEec
Q psy14259 22 PYLQHISWAPVDNALAFVYN-RDVYYSPSATLQDIYRLS 59 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~-nnly~~~~~~~~~~~~lT 59 (79)
..+..+.|||+|+.|||..+ +.|++++. ..++..+++
T Consensus 379 ~~~~~~~~SpDG~~la~~~~~~~v~~~d~-~tg~~~~~~ 416 (1045)
T 1k32_A 379 GNVFAMGVDRNGKFAVVANDRFEIMTVDL-ETGKPTVIE 416 (1045)
T ss_dssp CSEEEEEECTTSSEEEEEETTSEEEEEET-TTCCEEEEE
T ss_pred cceeeeEECCCCCEEEEECCCCeEEEEEC-CCCceEEec
Confidence 45788999999999999876 47998863 444455554
No 32
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.15 E-value=5.8 Score=28.95 Aligned_cols=37 Identities=11% Similarity=-0.091 Sum_probs=24.9
Q ss_pred CeeeeEEccCCCeEEEEEc-C--CEEEEcCCCCCCeEEeccC
Q psy14259 23 YLQHISWAPVDNALAFVYN-R--DVYYSPSATLQDIYRLSNT 61 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~-n--nly~~~~~~~~~~~~lT~d 61 (79)
....++|||+|+.|+.... + .||+.+. .+++.. ++.+
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~-~~~~~~-~~~~ 235 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDP-RDGSVE-DLEL 235 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECT-TTCCEE-ECCC
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcC-CCCcEE-EccC
Confidence 4678999999999994433 3 6999863 444344 4433
No 33
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=82.87 E-value=3.7 Score=29.28 Aligned_cols=31 Identities=19% Similarity=0.459 Sum_probs=26.6
Q ss_pred CCCCeeeeEEccCCCeEEEEEcCCEEEEcCC
Q psy14259 20 EAPYLQHISWAPVDNALAFVYNRDVYYSPSA 50 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~nnly~~~~~ 50 (79)
....+..++|||+|+.||+..++.|.+++..
T Consensus 17 ~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~ 47 (615)
T 1pgu_A 17 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLD 47 (615)
T ss_dssp CTTCCCCCEEETTTTEEEEEETTEEEEEECC
T ss_pred ccCceeEEEECCCCCEEEEecCCeEEEEECC
Confidence 4456888999999999999999999998743
No 34
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=82.14 E-value=1.8 Score=33.83 Aligned_cols=27 Identities=15% Similarity=0.238 Sum_probs=22.7
Q ss_pred CeeeeEEc-cCCCeEEEEEcCC------EEEEcC
Q psy14259 23 YLQHISWA-PVDNALAFVYNRD------VYYSPS 49 (79)
Q Consensus 23 ~~q~a~ws-P~g~~lafV~~nn------ly~~~~ 49 (79)
.+..+.|| |+|+.|||+.+.+ ||+.+.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl 208 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRI 208 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEEC
Confidence 46678999 9999999998753 999974
No 35
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=80.55 E-value=2.1 Score=32.58 Aligned_cols=27 Identities=11% Similarity=-0.082 Sum_probs=22.5
Q ss_pred CeeeeEEccCCCeEEEEEc------CCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVYN------RDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~------nnly~~~~ 49 (79)
.+..+.|||+|+.|||..+ ..||+++.
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl 154 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDV 154 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEET
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEEC
Confidence 4778899999999999975 35999974
No 36
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=80.09 E-value=2.5 Score=32.14 Aligned_cols=19 Identities=5% Similarity=0.275 Sum_probs=16.2
Q ss_pred eeeeEEccCCCeEEEEEcC
Q psy14259 24 LQHISWAPVDNALAFVYNR 42 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~n 42 (79)
...+.|||+|+.|+|+...
T Consensus 173 ~~~~~wspDg~~l~~~~~~ 191 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYP 191 (710)
T ss_dssp SCCEEECTTSSEEEEEECC
T ss_pred cceEEEEeCCCEEEEEEEC
Confidence 4578999999999999753
No 37
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=79.06 E-value=4 Score=26.55 Aligned_cols=31 Identities=16% Similarity=0.251 Sum_probs=23.2
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeE
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSPSATLQDIY 56 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~ 56 (79)
...+.|||+|+.|++. +++|++.+. ..++..
T Consensus 137 ~~~~~~s~dg~~l~~~-~~~i~~~d~-~~~~~~ 167 (337)
T 1pby_B 137 ITMLAWARDGSKLYGL-GRDLHVMDP-EAGTLV 167 (337)
T ss_dssp CCCEEECTTSSCEEEE-SSSEEEEET-TTTEEE
T ss_pred cceeEECCCCCEEEEe-CCeEEEEEC-CCCcEe
Confidence 4567899999988777 899999974 334343
No 38
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=78.80 E-value=2.8 Score=31.83 Aligned_cols=25 Identities=12% Similarity=0.380 Sum_probs=20.8
Q ss_pred eeeEEccCCCeEEEEEcCC--------------EEEEcC
Q psy14259 25 QHISWAPVDNALAFVYNRD--------------VYYSPS 49 (79)
Q Consensus 25 q~a~wsP~g~~lafV~~nn--------------ly~~~~ 49 (79)
..+.|||+|+.|+|+.... ||+.+.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l 209 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTL 209 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEET
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEEC
Confidence 6789999999999997633 998864
No 39
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=78.26 E-value=3.1 Score=29.13 Aligned_cols=26 Identities=15% Similarity=0.261 Sum_probs=23.0
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
.+..++|||+|+.||..-+..+.++.
T Consensus 361 ~V~svafspdG~~LA~as~~Gv~lvr 386 (393)
T 4gq1_A 361 PIVDFCWHQDGSHLAIATEGSVLLTR 386 (393)
T ss_dssp CEEEEEECTTSSEEEEEESSEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 47889999999999999999888775
No 40
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=76.79 E-value=13 Score=28.29 Aligned_cols=38 Identities=8% Similarity=0.034 Sum_probs=27.0
Q ss_pred eeeeEEccCCCeEEEEEc-----CCEEEEcCCCC-CCeEEeccC
Q psy14259 24 LQHISWAPVDNALAFVYN-----RDVYYSPSATL-QDIYRLSNT 61 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~-----nnly~~~~~~~-~~~~~lT~d 61 (79)
.-.+.|||+|+.|+|... +.||+.+.... ...++|+..
T Consensus 236 ~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~ 279 (693)
T 3iuj_A 236 YVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD 279 (693)
T ss_dssp EEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS
T ss_pred EEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC
Confidence 456889999999999875 58999863222 245677654
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=76.37 E-value=5.3 Score=29.73 Aligned_cols=30 Identities=13% Similarity=0.256 Sum_probs=24.7
Q ss_pred CCCCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
+......++|||+|+.||+..++.+++++.
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~ 46 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPV 46 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEET
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecC
Confidence 344456778999999999999999999863
No 42
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=76.20 E-value=4.5 Score=28.45 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=21.2
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
.....|||+|+.||-..++.|++++
T Consensus 403 ~s~~~fspdg~~lasg~d~~i~iW~ 427 (435)
T 4e54_B 403 SSLNEFNPMGDTLASAMGYHILIWS 427 (435)
T ss_dssp CCEEEECTTSSCEEEECSSEEEECC
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEE
Confidence 4445799999999999899999996
No 43
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=75.70 E-value=1.5 Score=34.24 Aligned_cols=25 Identities=24% Similarity=0.473 Sum_probs=20.3
Q ss_pred eeeEEccCCCeEEEEEcC------CEEEEcC
Q psy14259 25 QHISWAPVDNALAFVYNR------DVYYSPS 49 (79)
Q Consensus 25 q~a~wsP~g~~lafV~~n------nly~~~~ 49 (79)
..+.|||+|+.|+|+... .||+.+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 467999999999999763 5888864
No 44
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=75.23 E-value=12 Score=24.25 Aligned_cols=25 Identities=4% Similarity=-0.238 Sum_probs=20.4
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
...+.|||+|+.|+.. ++.|++.+.
T Consensus 243 ~~~~~~s~dg~~l~~~-~~~v~~~d~ 267 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA-YNVLESFDL 267 (337)
T ss_dssp EEEEEECTTSSEEEEE-ESEEEEEET
T ss_pred eeeEEECCCCCEEEEe-CCeEEEEEC
Confidence 4458999999987776 889999874
No 45
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=74.92 E-value=7.6 Score=25.41 Aligned_cols=31 Identities=13% Similarity=0.060 Sum_probs=22.5
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEE
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSPSATLQDIYR 57 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~ 57 (79)
+..++|||+|+ +|+.+++|++.+. ..++..+
T Consensus 150 ~~~~~~s~dg~--l~~~~~~i~~~d~-~~~~~~~ 180 (349)
T 1jmx_B 150 VYLMRAADDGS--LYVAGPDIYKMDV-KTGKYTV 180 (349)
T ss_dssp CCCEEECTTSC--EEEESSSEEEECT-TTCCEEE
T ss_pred ccceeECCCCc--EEEccCcEEEEeC-CCCceec
Confidence 55677999998 5778999999964 4443443
No 46
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=74.23 E-value=5.5 Score=30.54 Aligned_cols=37 Identities=11% Similarity=-0.073 Sum_probs=26.7
Q ss_pred eeeeEEccCCCeEEEEEc------CCEEEEcCCCCC--C-eEEeccC
Q psy14259 24 LQHISWAPVDNALAFVYN------RDVYYSPSATLQ--D-IYRLSNT 61 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~------nnly~~~~~~~~--~-~~~lT~d 61 (79)
...+.|||+|+.|+|... ++||+.+. .++ . ..+|+..
T Consensus 270 ~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~-~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 270 GHGASVSSDGRWVVITSSEGTDPVNTVHVARV-TNGKIGPVTALIPD 315 (741)
T ss_dssp EEEEEECTTSCEEEEEEECTTCSCCEEEEEEE-ETTEECCCEEEECS
T ss_pred EEEEEECCCCCEEEEEEEccCCCcceEEEEEC-CCCCCcccEEecCC
Confidence 667899999999999874 37999863 333 3 5566643
No 47
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=74.09 E-value=6.6 Score=26.56 Aligned_cols=28 Identities=14% Similarity=0.132 Sum_probs=23.0
Q ss_pred CCCeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
...+..++|+|+|+.||-.-|+.|.+++
T Consensus 352 ~~~~~~~~~s~~g~~l~s~sd~~i~iw~ 379 (383)
T 3ei3_B 352 AGIISLNKFSPTGDVLASGMGFNILIWN 379 (383)
T ss_dssp CSCCCEEEECTTSSEEEEEETTEEEEEE
T ss_pred CceEEEEEEecCccEEEEecCCcEEEEe
Confidence 3445666999999999999888899886
No 48
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=73.64 E-value=13 Score=24.93 Aligned_cols=34 Identities=9% Similarity=0.032 Sum_probs=25.1
Q ss_pred CeeeeEEccCCCeEEEEE--cCCEEEEcCCCCCCeEE
Q psy14259 23 YLQHISWAPVDNALAFVY--NRDVYYSPSATLQDIYR 57 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~--~nnly~~~~~~~~~~~~ 57 (79)
.+..++|||+|+.|++.. ++.|++.+. ..++..+
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~-~~~~~~~ 110 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDT-TSNTVAG 110 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEET-TTTEEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEEC-CCCeEEE
Confidence 577899999999998886 468999864 4443433
No 49
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=73.35 E-value=16 Score=23.75 Aligned_cols=30 Identities=10% Similarity=-0.002 Sum_probs=24.4
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..++|||+|+.|+... ++.|++++.
T Consensus 31 h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~ 61 (369)
T 3zwl_B 31 HERPLTQVKYNKEGDLLFSCSKDSSASVWYS 61 (369)
T ss_dssp CSSCEEEEEECTTSCEEEEEESSSCEEEEET
T ss_pred eeceEEEEEEcCCCCEEEEEeCCCEEEEEeC
Confidence 445688899999999999875 678999864
No 50
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=69.65 E-value=24 Score=24.46 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=29.3
Q ss_pred CccceeecccCCCCCCCeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 7 PIRAEKQQNINDHEAPYLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
.+|...++.........+..++|||+|+.||-. .|+.|.+++.
T Consensus 133 ~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~ 176 (420)
T 4gga_A 133 SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 176 (420)
T ss_dssp TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEc
Confidence 345544444333344458889999999999876 4577888863
No 51
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=68.54 E-value=5.7 Score=26.27 Aligned_cols=29 Identities=14% Similarity=0.204 Sum_probs=24.2
Q ss_pred CCCeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
...+..++|+|+|+.|+.. .++.|++++.
T Consensus 8 ~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~ 37 (372)
T 1k8k_C 8 VEPISCHAWNKDRTQIAICPNNHEVHIYEK 37 (372)
T ss_dssp SSCCCEEEECTTSSEEEEECSSSEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCEEEEEeC
Confidence 3458889999999999999 7788998863
No 52
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=65.75 E-value=8.4 Score=27.08 Aligned_cols=35 Identities=9% Similarity=0.055 Sum_probs=26.5
Q ss_pred EEccCCCeEEEEE-----cCCEEEEcCCCCCCeEEeccCCC
Q psy14259 28 SWAPVDNALAFVY-----NRDVYYSPSATLQDIYRLSNTGS 63 (79)
Q Consensus 28 ~wsP~g~~lafV~-----~nnly~~~~~~~~~~~~lT~dG~ 63 (79)
.|+|.|+.|+|+. +..||..+. .+....+||..+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~-dGs~~~~lt~~~~ 149 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRI-DGEEKKKIKNHYL 149 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEET-TSCCCEEEESSCC
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEEC-CCCCeEEEeCCCc
Confidence 7999999999997 356887764 4445778987754
No 53
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=65.10 E-value=26 Score=22.87 Aligned_cols=26 Identities=19% Similarity=0.227 Sum_probs=20.2
Q ss_pred eeeeEEccCCCeEEEEE--------cCCEEEEcC
Q psy14259 24 LQHISWAPVDNALAFVY--------NRDVYYSPS 49 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~--------~nnly~~~~ 49 (79)
...+.|||+|+.|+... ++.|++.+.
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~ 76 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDP 76 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECT
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcC
Confidence 55679999999997666 456999864
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=64.85 E-value=32 Score=23.81 Aligned_cols=50 Identities=22% Similarity=0.458 Sum_probs=31.9
Q ss_pred CCccceeecccCCC-CCCCeeeeEEccCCCeEEEEEcCCEEEEcCCCCCCeEE
Q psy14259 6 LPIRAEKQQNINDH-EAPYLQHISWAPVDNALAFVYNRDVYYSPSATLQDIYR 57 (79)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~~q~a~wsP~g~~lafV~~nnly~~~~~~~~~~~~ 57 (79)
+|....+.+.-+.. .+-.+....||+ ++.||--.|+.||+++. ..++..+
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~-~n~lAvgld~tV~lWd~-~tg~~~~ 139 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSS-GNVLAVALDNSVYLWSA-SSGDILQ 139 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECT-TSEEEEEETTEEEEEET-TTCCEEE
T ss_pred cCCCCceEEECCCCcccccceeEEECC-CCEEEEEeCCEEEEEEC-CCCCEEE
Confidence 34444444443332 344677899997 46899889999999974 4443443
No 55
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=64.47 E-value=21 Score=23.16 Aligned_cols=26 Identities=12% Similarity=-0.174 Sum_probs=20.9
Q ss_pred CeeeeEEcc-CCCeEEEEEcCCEEEEcC
Q psy14259 23 YLQHISWAP-VDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP-~g~~lafV~~nnly~~~~ 49 (79)
......||| +|+.|+.. ++.|++++.
T Consensus 256 ~~~~~~~sp~dg~~l~~~-~~~v~~~d~ 282 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV-LNRLAKYDL 282 (349)
T ss_dssp CEEEEEECSSCTTEEEEE-ESEEEEEET
T ss_pred cceeeEecCCCCCEEEEE-cCeEEEEEC
Confidence 355678999 99988777 889999864
No 56
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=64.21 E-value=17 Score=25.07 Aligned_cols=28 Identities=11% Similarity=0.029 Sum_probs=23.0
Q ss_pred CCCeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
...+..++|||+|+.||...++.+.+++
T Consensus 64 ~~~V~~v~fspdg~~la~g~~~~v~i~~ 91 (393)
T 1erj_A 64 TSVVCCVKFSNDGEYLATGCNKTTQVYR 91 (393)
T ss_dssp SSCCCEEEECTTSSEEEEECBSCEEEEE
T ss_pred CCEEEEEEECCCCCEEEEEcCCcEEEEE
Confidence 3456788999999999998888887775
No 57
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=63.00 E-value=19 Score=25.60 Aligned_cols=34 Identities=12% Similarity=-0.026 Sum_probs=24.7
Q ss_pred eeeeEEccCCCeEEEEE---cCCEEEEcCCCCCCeEEe
Q psy14259 24 LQHISWAPVDNALAFVY---NRDVYYSPSATLQDIYRL 58 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~---~nnly~~~~~~~~~~~~l 58 (79)
.....|||+|+.++|+- +|.|++++. ...+.++.
T Consensus 320 p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~-~t~~vv~~ 356 (373)
T 2mad_H 320 VDAISVAQDGGPDLYALSAGTEVLHIYDA-GAGDQDQS 356 (373)
T ss_pred cCeEEECCCCCeEEEEEcCCCCeEEEEEC-CCCCEEee
Confidence 45778999999788884 588999974 44445543
No 58
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=62.02 E-value=16 Score=23.78 Aligned_cols=30 Identities=7% Similarity=0.029 Sum_probs=24.3
Q ss_pred CCCCeeeeEEccCCCeEEEEE-----cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-----NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-----~nnly~~~~ 49 (79)
....+..++|+|+|..++.+- ++.|++++.
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~ 51 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEI 51 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEE
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeC
Confidence 444688999999999888776 788999864
No 59
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=61.22 E-value=27 Score=24.03 Aligned_cols=27 Identities=7% Similarity=-0.039 Sum_probs=20.5
Q ss_pred CeeeeEEccCCCeEEEEE---cCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVY---NRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~---~nnly~~~~ 49 (79)
.+..++|||+|+.||..- |+-|.+++.
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~ 164 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDP 164 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEET
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeEC
Confidence 355689999999998875 455888863
No 60
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=59.66 E-value=9.9 Score=26.71 Aligned_cols=25 Identities=8% Similarity=-0.031 Sum_probs=22.3
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
++...|||+|+.|+...++.|++++
T Consensus 7 ~~~v~~s~dg~~l~~~~~~~i~v~d 31 (450)
T 2vdu_B 7 LQNLLTSRDGSLVFAIIKNCILSFK 31 (450)
T ss_dssp CCEEEECSSSSEEEEEETTEEEEEE
T ss_pred EEEEEecCCCCEEEEEeCCeEEEEE
Confidence 6778899999988888999999986
No 61
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=59.64 E-value=24 Score=23.60 Aligned_cols=29 Identities=7% Similarity=0.058 Sum_probs=25.4
Q ss_pred CCCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
...+...+|||+|..|+-..++.|.+++.
T Consensus 214 ~~~v~~l~fs~~g~~l~s~~~~~v~iwd~ 242 (343)
T 3lrv_A 214 EAKIKEVKFADNGYWMVVECDQTVVCFDL 242 (343)
T ss_dssp TSCEEEEEECTTSSEEEEEESSBEEEEET
T ss_pred CCCEEEEEEeCCCCEEEEEeCCeEEEEEc
Confidence 45688999999999999999999999963
No 62
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=59.10 E-value=21 Score=23.99 Aligned_cols=30 Identities=10% Similarity=0.184 Sum_probs=24.3
Q ss_pred CCCCeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
....+..++|+|+|+.|+.. .++.|.+++.
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~ 96 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALDNGSLELYST 96 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEESSSCEEEECC
T ss_pred cCCceEEEEECCCCCeEEEEccCCeEEEeec
Confidence 34568899999999999987 4578999864
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=58.80 E-value=22 Score=23.27 Aligned_cols=30 Identities=23% Similarity=0.203 Sum_probs=23.6
Q ss_pred CCCCeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
....+..+.|+|+|+.|+.. .++.|++++-
T Consensus 255 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 285 (379)
T 3jrp_A 255 FPDVLWRASWSLSGNVLALSGGDNKVTLWKE 285 (379)
T ss_dssp CSSCEEEEEECSSSCCEEEEESSSSEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEEecCCCcEEEEeC
Confidence 44457889999999999986 5677888863
No 64
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=58.55 E-value=36 Score=22.73 Aligned_cols=27 Identities=11% Similarity=-0.002 Sum_probs=22.4
Q ss_pred CeeeeEEccCCCeEEEE--EcCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFV--YNRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV--~~nnly~~~~ 49 (79)
....++|||+|+.|++. .++.|++++.
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~ 61 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDT 61 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEET
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEEC
Confidence 36789999999998777 5788999974
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=57.81 E-value=13 Score=23.99 Aligned_cols=29 Identities=3% Similarity=-0.235 Sum_probs=25.0
Q ss_pred CCCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
...+....|+|+|+.|+...++.|.+++.
T Consensus 51 ~~~v~~~~~~~~~~~l~~~~dg~i~iw~~ 79 (337)
T 1gxr_A 51 GEVVCAVTISNPTRHVYTGGKGCVKVWDI 79 (337)
T ss_dssp SSCCCEEEECSSSSEEEEECBSEEEEEET
T ss_pred CCceEEEEEecCCcEEEEcCCCeEEEEEC
Confidence 44578899999999999999999999864
No 66
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=57.21 E-value=37 Score=22.09 Aligned_cols=32 Identities=3% Similarity=-0.052 Sum_probs=22.4
Q ss_pred eeeeEEccCCCeEEEEE---cCCEEEEcCCCCCCeE
Q psy14259 24 LQHISWAPVDNALAFVY---NRDVYYSPSATLQDIY 56 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~---~nnly~~~~~~~~~~~ 56 (79)
...+.|||+|+.++... ++.|++.+. ...+..
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~-~~~~~~ 177 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDG-GNIKLK 177 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEET-TTTEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcC-CCCceE
Confidence 46689999999877765 455999864 333333
No 67
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=57.09 E-value=32 Score=22.06 Aligned_cols=29 Identities=10% Similarity=0.038 Sum_probs=23.1
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..+.|+|+|+.|+... ++.|++++.
T Consensus 141 ~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 141 APACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 34578889999999988884 577998864
No 68
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=56.71 E-value=14 Score=25.98 Aligned_cols=46 Identities=22% Similarity=0.308 Sum_probs=32.9
Q ss_pred EEccCCCeEEEEE---cCCEEEEcCCCCCCeEEeccCCCceeEecccceee
Q psy14259 28 SWAPVDNALAFVY---NRDVYYSPSATLQDIYRLSNTGSEVVSNGVPDWLY 75 (79)
Q Consensus 28 ~wsP~g~~lafV~---~nnly~~~~~~~~~~~~lT~dG~~~i~nG~~DWvY 75 (79)
-++++|+.|.|.. ++.||-.+. .+....+||.+. ..-+|=.-+|+|
T Consensus 20 ~~~~~g~~iy~~n~~d~~~ly~~~~-dg~~~~~l~~~~-~~~i~~~g~~Iy 68 (302)
T 3s25_A 20 LFCESDGEVFFSNTNDNGRLYAMNI-DGSNIHKLSNDT-AMYINADKNYVY 68 (302)
T ss_dssp CEEEETTEEEEEEGGGTTEEEEEET-TSCSCEEEEEEE-EEEEEECSSEEE
T ss_pred EEEEeCCEEEEEeCCCCceEEEEcC-CCCCCEEccCCc-eeeEEEcCCEEE
Confidence 4678899999986 577998864 444588888654 444566667887
No 69
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=55.56 E-value=40 Score=21.92 Aligned_cols=24 Identities=0% Similarity=-0.045 Sum_probs=19.0
Q ss_pred eeEEccCCCeEEEEEc--CCEEEEcC
Q psy14259 26 HISWAPVDNALAFVYN--RDVYYSPS 49 (79)
Q Consensus 26 ~a~wsP~g~~lafV~~--nnly~~~~ 49 (79)
.++|||+|+.|+.+.. +.|++.+.
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~ 69 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIET 69 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEEC
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEEC
Confidence 8899999997777654 57888864
No 70
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=54.99 E-value=17 Score=24.36 Aligned_cols=25 Identities=8% Similarity=-0.227 Sum_probs=18.8
Q ss_pred CeeeeEEccCCCeEEEEEc-----CCEEEE
Q psy14259 23 YLQHISWAPVDNALAFVYN-----RDVYYS 47 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~-----nnly~~ 47 (79)
....++|||+|+.|+++.. +.|.+.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~ 80 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAF 80 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEE
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEE
Confidence 3566799999999988877 366544
No 71
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=54.79 E-value=21 Score=23.19 Aligned_cols=30 Identities=13% Similarity=0.191 Sum_probs=23.5
Q ss_pred CCCCCeeeeEEccCCCeEEEEE-cCCEEEEc
Q psy14259 19 HEAPYLQHISWAPVDNALAFVY-NRDVYYSP 48 (79)
Q Consensus 19 ~~~~~~q~a~wsP~g~~lafV~-~nnly~~~ 48 (79)
.....+..++|+|+|+.|+... ++.|++++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~ 39 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYK 39 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 3445688999999999988875 57788876
No 72
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=53.28 E-value=51 Score=22.50 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=24.4
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..++|+|+|+.|+... ++.|.+++.
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~ 163 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDV 163 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEEC
Confidence 344588999999999999886 678888864
No 73
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=53.21 E-value=20 Score=24.62 Aligned_cols=30 Identities=3% Similarity=-0.014 Sum_probs=22.3
Q ss_pred CCCCeeeeEEccCCCeEEEEE-------cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-------NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-------~nnly~~~~ 49 (79)
....+..++|||+|+.||-.- |..|++.+.
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~ 77 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKD 77 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESS
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEEC
Confidence 344578899999999998775 345777754
No 74
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=52.98 E-value=23 Score=22.88 Aligned_cols=27 Identities=7% Similarity=-0.020 Sum_probs=20.9
Q ss_pred CeeeeEEccCCCeEEEEE--cCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVY--NRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~--~nnly~~~~ 49 (79)
....+.|||+|+.|+... ++.|++++.
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 158 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALKQDRICLFTV 158 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CceEEEECCCCCEEEEecCCCCEEEEEEe
Confidence 467789999999887664 577888763
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=51.35 E-value=21 Score=23.35 Aligned_cols=28 Identities=7% Similarity=0.007 Sum_probs=23.0
Q ss_pred CCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
..+..++|||+|+.||... ++.|++++.
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 40 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEV 40 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEec
Confidence 4588899999999999885 677888863
No 76
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=50.62 E-value=49 Score=21.48 Aligned_cols=26 Identities=12% Similarity=0.080 Sum_probs=20.3
Q ss_pred eeeeEEccCCCeEEEEE--cCCEEEEcC
Q psy14259 24 LQHISWAPVDNALAFVY--NRDVYYSPS 49 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~--~nnly~~~~ 49 (79)
...+.|||+|+.|..+. ++.|++.+.
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 57789999999887775 456888863
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=50.24 E-value=36 Score=21.59 Aligned_cols=28 Identities=4% Similarity=-0.128 Sum_probs=23.4
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
..+..+.|+|+|+.++--.|+.|++++.
T Consensus 267 ~~i~~~~~~~~~~~~~~~~dg~i~iw~~ 294 (313)
T 3odt_A 267 ISIWSVDCMSNGDIIVGSSDNLVRIFSQ 294 (313)
T ss_dssp SCEEEEEECTTSCEEEEETTSCEEEEES
T ss_pred ceEEEEEEccCCCEEEEeCCCcEEEEeC
Confidence 3588899999999888778889999974
No 78
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=50.19 E-value=52 Score=21.70 Aligned_cols=36 Identities=11% Similarity=0.123 Sum_probs=21.8
Q ss_pred eeeeEEccCCCeEEEEEc--CCEEEEc-CCCCCCeEEec
Q psy14259 24 LQHISWAPVDNALAFVYN--RDVYYSP-SATLQDIYRLS 59 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~--nnly~~~-~~~~~~~~~lT 59 (79)
...++|||+|+.|+.... +.+.+.. +...++..++.
T Consensus 288 ~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~~~ 326 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLSLLQ 326 (347)
T ss_dssp CCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEEecc
Confidence 567899999998877753 4455552 13334344443
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=50.07 E-value=4.1 Score=27.36 Aligned_cols=27 Identities=4% Similarity=-0.087 Sum_probs=22.7
Q ss_pred CeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
.+..++|||+|+.||.. .++.|++++.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~ 40 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQ 40 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEE
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEc
Confidence 47788999999999998 7788888763
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=49.63 E-value=22 Score=26.47 Aligned_cols=26 Identities=12% Similarity=0.183 Sum_probs=22.8
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
.+..+.|||+|+.|+...++.+++.+
T Consensus 358 ~~~~~~~spdg~~la~~~~~~~~i~~ 383 (814)
T 3mkq_A 358 FPQSLAHSPNGRFVTVVGDGEYVIYT 383 (814)
T ss_dssp CCSEEEECTTSSEEEEEETTEEEEEE
T ss_pred CCceeEECCCCCEEEEecCCEEEEEE
Confidence 46788999999999999999888876
No 81
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=48.57 E-value=43 Score=22.72 Aligned_cols=26 Identities=8% Similarity=0.051 Sum_probs=20.1
Q ss_pred CeeeeEEccCCCeEEEEE--cCCEEEEc
Q psy14259 23 YLQHISWAPVDNALAFVY--NRDVYYSP 48 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~--~nnly~~~ 48 (79)
....+.|+|+|+.|+... ++.|++++
T Consensus 402 ~~~~~~~s~dg~~l~~~~~~d~~i~v~~ 429 (433)
T 3bws_A 402 QPTGLDVSPDNRYLVISDFLDHQIRVYR 429 (433)
T ss_dssp SEEEEEECTTSCEEEEEETTTTEEEEEE
T ss_pred CCceEEEcCCCCEEEEEECCCCeEEEEE
Confidence 467889999999988773 67777774
No 82
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=48.39 E-value=33 Score=22.79 Aligned_cols=30 Identities=20% Similarity=0.462 Sum_probs=23.0
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..++|+|+|+.|+..- |+.|++++.
T Consensus 54 h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 54 HDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred CCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 344588899999999999886 678888863
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=48.24 E-value=28 Score=23.84 Aligned_cols=33 Identities=12% Similarity=0.368 Sum_probs=22.8
Q ss_pred CCCeeeeEEcc-CCCeEEEE-EcCCEEEEcCCCCC
Q psy14259 21 APYLQHISWAP-VDNALAFV-YNRDVYYSPSATLQ 53 (79)
Q Consensus 21 ~~~~q~a~wsP-~g~~lafV-~~nnly~~~~~~~~ 53 (79)
...+..++||| +++.||-. .|+.|++++-...+
T Consensus 311 ~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 311 RDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 34578889999 68888765 57889998744333
No 84
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=47.73 E-value=58 Score=22.04 Aligned_cols=27 Identities=19% Similarity=0.177 Sum_probs=21.6
Q ss_pred CeeeeEEccCCCeEEEEEcC----------------CEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVYNR----------------DVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~n----------------nly~~~~ 49 (79)
....++|+|+|+.|+..... .|++++.
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEEC
Confidence 46788999999988887653 7999974
No 85
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=45.98 E-value=40 Score=21.84 Aligned_cols=28 Identities=11% Similarity=0.174 Sum_probs=21.9
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~ 48 (79)
...+..+.|||+|+.|+-.- |+.|++++
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 45688899999999988874 45677775
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=45.08 E-value=70 Score=21.69 Aligned_cols=30 Identities=7% Similarity=0.174 Sum_probs=24.0
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..+.|+|+|+.|+... |+.|++++.
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEP 205 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeC
Confidence 344688999999999999885 677888863
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=44.94 E-value=26 Score=23.83 Aligned_cols=30 Identities=7% Similarity=-0.136 Sum_probs=25.0
Q ss_pred CCCCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
....+..++|+|+|+.|+-..|+.|.+++.
T Consensus 176 h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~ 205 (447)
T 3dw8_B 176 HTYHINSISINSDYETYLSADDLRINLWHL 205 (447)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSEEEEEET
T ss_pred CCcceEEEEEcCCCCEEEEeCCCeEEEEEC
Confidence 344578899999999999988888999864
No 88
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=44.87 E-value=41 Score=22.88 Aligned_cols=30 Identities=13% Similarity=0.202 Sum_probs=23.5
Q ss_pred CCCCeeeeEEccCCCeEEEEEc-CCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVYN-RDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~-nnly~~~~ 49 (79)
....+..++|||+|+.|+-.-+ +.|.+++-
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~ 269 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEI 269 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEES
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEc
Confidence 3456888999999999998854 66888863
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=44.84 E-value=30 Score=27.38 Aligned_cols=28 Identities=21% Similarity=0.225 Sum_probs=22.0
Q ss_pred CCCeeeeEEccCCCeEEEE-EcCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFV-YNRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV-~~nnly~~~ 48 (79)
.+.+-..+|||+|..||-. .++++.+.+
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd 113 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFK 113 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEe
Confidence 5668899999999999866 446677775
No 90
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=44.60 E-value=75 Score=21.92 Aligned_cols=29 Identities=7% Similarity=-0.047 Sum_probs=20.6
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEEcCCCCC
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYSPSATLQ 53 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~~~~~~~ 53 (79)
...+.|||+|+.|+-..++.|.+++. ...
T Consensus 307 p~~ia~spdg~~l~v~n~~~v~v~D~-~t~ 335 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDGGNVNVYDI-SQP 335 (361)
T ss_dssp CCEEEEETTTTEEEEECSSCEEEEEC-SSS
T ss_pred eeEEEECCCCCEEEEeCCCeEEEEEC-CCC
Confidence 56779999999554444478999963 444
No 91
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=44.40 E-value=58 Score=20.56 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=23.8
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..+.|+|+|+.|+-.- |+.|.+++-
T Consensus 305 h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 305 HNGEVWSVSWNLTGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp TSSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred ccccEEEEEEcCCCCEEEEecCCCcEEEEec
Confidence 344588899999999998886 567888864
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=44.10 E-value=74 Score=22.44 Aligned_cols=30 Identities=13% Similarity=-0.041 Sum_probs=24.4
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
....+..+.|||+|+.|+... ++.|++++.
T Consensus 487 ~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~ 517 (615)
T 1pgu_A 487 LRAKPSYISISPSETYIAAGDVMGKILLYDL 517 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccCceEEEEECCCCCEEEEcCCCCeEEEeeC
Confidence 345688899999999999984 578998864
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=43.65 E-value=98 Score=22.98 Aligned_cols=28 Identities=11% Similarity=0.027 Sum_probs=22.7
Q ss_pred CCeeeeEEccCCCeEEEEEc-CCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVYN-RDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~-nnly~~~~ 49 (79)
..+..++|||+|+.||.... +.|.+++-
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~ 42 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNY 42 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEET
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 34888999999999999875 56888863
No 94
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=42.97 E-value=26 Score=23.91 Aligned_cols=29 Identities=3% Similarity=-0.046 Sum_probs=22.1
Q ss_pred CCCCeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 20 EAPYLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
....+-.++|||+|+.||--.++.+.+++
T Consensus 18 h~~~V~~v~fs~dg~~la~g~~~~~~iw~ 46 (355)
T 3vu4_A 18 VSNPVTDYEFNQDQSCLILSTLKSFEIYN 46 (355)
T ss_dssp -CCCCCEEEECTTSSEEEEECSSEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCEEEEEe
Confidence 34558889999999999988777665554
No 95
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=42.95 E-value=37 Score=23.20 Aligned_cols=28 Identities=7% Similarity=0.236 Sum_probs=23.3
Q ss_pred CCeeeeEEccCCCeEEEEE---cCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVY---NRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~---~nnly~~~~ 49 (79)
..+..+.|+|+|+.|+.+. ++.|++++-
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 3588899999999999986 788888863
No 96
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=42.50 E-value=64 Score=20.49 Aligned_cols=43 Identities=16% Similarity=0.144 Sum_probs=27.9
Q ss_pred CccceeecccCCCCCCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 7 PIRAEKQQNINDHEAPYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
.+|...+..........+..++|+|+|+.||-.- |+.|.+++.
T Consensus 53 ~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~ 96 (318)
T 4ggc_A 53 SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDV 96 (318)
T ss_dssp TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeec
Confidence 3444444332333344588899999999988764 567888863
No 97
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=41.65 E-value=39 Score=22.96 Aligned_cols=27 Identities=7% Similarity=0.148 Sum_probs=19.4
Q ss_pred CCeeeeEEccCCCeEEEEE--cCCEEEEc
Q psy14259 22 PYLQHISWAPVDNALAFVY--NRDVYYSP 48 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~--~nnly~~~ 48 (79)
.....+.|||+|+.|+... ++.|++.+
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~~~v~~~~ 173 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTANKLWTHR 173 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CcceEEEECCCCCEEEEEcCCCCEEEEEE
Confidence 3467789999999875443 35688775
No 98
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=41.45 E-value=57 Score=21.61 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=22.4
Q ss_pred CCeeeeEEccCCCeEEEE-EcCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFV-YNRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV-~~nnly~~~~ 49 (79)
..+..++|||+|+.||-. .|+.|.+++.
T Consensus 263 ~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 263 DVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp SCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 357788999999999887 4677888864
No 99
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=40.93 E-value=85 Score=21.48 Aligned_cols=27 Identities=19% Similarity=0.242 Sum_probs=21.7
Q ss_pred CeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
.+..++|||+|+.||... |+.|.+++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~ 152 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDI 152 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 367889999999998874 577888863
No 100
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=40.70 E-value=15 Score=27.41 Aligned_cols=30 Identities=7% Similarity=0.049 Sum_probs=23.4
Q ss_pred CCeeeeEEccCCCeEEEEE------cCCEEEEcCCC
Q psy14259 22 PYLQHISWAPVDNALAFVY------NRDVYYSPSAT 51 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~------~nnly~~~~~~ 51 (79)
..+-.+.|+|+|+.|.+.- ++.|.+++..+
T Consensus 479 ~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 479 KRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp CEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 3466789999999998862 58899997543
No 101
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=40.17 E-value=31 Score=25.57 Aligned_cols=25 Identities=12% Similarity=0.317 Sum_probs=18.4
Q ss_pred eeeeEEccCCCeEEEE-EcCCEEEEc
Q psy14259 24 LQHISWAPVDNALAFV-YNRDVYYSP 48 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV-~~nnly~~~ 48 (79)
...++|||+|+.|+-- .|+.|++++
T Consensus 329 vs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 329 WSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEec
Confidence 4457899999988766 456777764
No 102
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=39.16 E-value=38 Score=23.06 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=22.8
Q ss_pred CCCeeeeEEccCCCeEEEE----EcCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFV----YNRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV----~~nnly~~~~ 49 (79)
...+..+.|+|+|+.|+.. .++.|++++.
T Consensus 220 ~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 220 GTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp SSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 3347788999999988876 6788888864
No 103
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=36.97 E-value=32 Score=24.66 Aligned_cols=28 Identities=21% Similarity=0.280 Sum_probs=22.4
Q ss_pred CCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
..+..++|||+|+.|+-.. |+.|.+++.
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~ 221 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLP 221 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEcc
Confidence 3578899999999998775 567888863
No 104
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=36.94 E-value=74 Score=21.33 Aligned_cols=30 Identities=10% Similarity=0.094 Sum_probs=23.4
Q ss_pred CCCCeeeeEEccCCCeEEEEEc-CCEEEEcC
Q psy14259 20 EAPYLQHISWAPVDNALAFVYN-RDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~~-nnly~~~~ 49 (79)
....+...+|+|+|+.|+..-. +.|++++.
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 3445888999999999888754 67888864
No 105
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=36.83 E-value=83 Score=20.22 Aligned_cols=36 Identities=3% Similarity=0.050 Sum_probs=25.7
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcCCCCCCeEE
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPSATLQDIYR 57 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~~~~~~~~~ 57 (79)
...+..+.|+|+|+.|+-.. |+.|.+++. ...+..+
T Consensus 86 ~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~-~~~~~~~ 122 (368)
T 3mmy_A 86 TGPVLDVCWSDDGSKVFTASCDKTAKMWDL-SSNQAIQ 122 (368)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEET-TTTEEEE
T ss_pred cCCEEEEEECcCCCEEEEEcCCCcEEEEEc-CCCCcee
Confidence 34588899999999998875 566888863 3333333
No 106
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=36.79 E-value=54 Score=21.76 Aligned_cols=26 Identities=12% Similarity=0.059 Sum_probs=22.2
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
.+..++|||+|..|+-..++.+.+..
T Consensus 239 ~v~~~~~sp~~~~la~~~~~~i~v~~ 264 (319)
T 3frx_A 239 EVFSLAFSPNRYWLAAATATGIKVFS 264 (319)
T ss_dssp CEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 47789999999999999988877664
No 107
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=35.72 E-value=87 Score=20.12 Aligned_cols=29 Identities=3% Similarity=-0.200 Sum_probs=23.1
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..+.|+|+|+.|+... ++.|++++.
T Consensus 74 ~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 74 TGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 44588899999999998885 466888864
No 108
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=35.11 E-value=79 Score=21.13 Aligned_cols=27 Identities=15% Similarity=-0.028 Sum_probs=20.2
Q ss_pred CeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
.+..+.|||+|+.|+... ++.|.+.+.
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~ 151 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGV 151 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEET
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEc
Confidence 456789999999998874 456777653
No 109
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=34.20 E-value=52 Score=23.28 Aligned_cols=28 Identities=11% Similarity=0.179 Sum_probs=22.8
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~ 48 (79)
...+...+|||+|+.||-.- |+.|.+++
T Consensus 57 ~~~V~~l~fspdg~~las~~~d~~i~vWd 85 (577)
T 2ymu_A 57 SSSVWGVAFSPDGQTIASASDDKTVKLWN 85 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 34588899999999999885 56788886
No 110
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=34.19 E-value=51 Score=19.05 Aligned_cols=24 Identities=4% Similarity=-0.058 Sum_probs=21.3
Q ss_pred eeeeEEccCCCeEEEEEcCCEEEE
Q psy14259 24 LQHISWAPVDNALAFVYNRDVYYS 47 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~nnly~~ 47 (79)
+-.+.|.|..+.++||.+..+++.
T Consensus 48 ~~~PH~hprA~ei~~V~~G~~~v~ 71 (79)
T 1dgw_X 48 LFVPHYNSRATVILVANEGRAEVE 71 (79)
T ss_dssp EEEEEEESSCEEEEEEEESCEEEE
T ss_pred CcCCccCCCCcEEEEEEeceEEEE
Confidence 566799999999999999999876
No 111
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=34.05 E-value=60 Score=21.65 Aligned_cols=27 Identities=15% Similarity=0.100 Sum_probs=23.4
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
.+..++|+|++..|+--.++.|.+++.
T Consensus 257 ~v~~v~~sp~~~~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 257 TINQIAFNPKLQWVAVGTDQGVKIFNL 283 (343)
T ss_dssp CEEEEEECSSSCEEEEEESSCEEEEES
T ss_pred cEEEEEECCCCCEEEEECCCCEEEEEe
Confidence 377889999999999888999998864
No 112
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=32.72 E-value=68 Score=21.36 Aligned_cols=29 Identities=14% Similarity=0.262 Sum_probs=22.4
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..++|||+|+.||-.- |+.|.+++.
T Consensus 107 ~~~V~~v~~sp~g~~las~s~D~~v~iwd~ 136 (330)
T 2hes_X 107 ENEVKGVAWSNDGYYLATCSRDKSVWIWET 136 (330)
T ss_dssp --CEEEEEECTTSCEEEEEETTSCEEEEEC
T ss_pred CCcEEEEEECCCCCEEEEEeCCCEEEEEec
Confidence 34578899999999998874 678888863
No 113
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=32.54 E-value=89 Score=20.49 Aligned_cols=30 Identities=3% Similarity=-0.097 Sum_probs=24.3
Q ss_pred CCCCeeeeEEcc-CCCeEEEEE-cCCEEEEcC
Q psy14259 20 EAPYLQHISWAP-VDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 20 ~~~~~q~a~wsP-~g~~lafV~-~nnly~~~~ 49 (79)
....+..++|+| +|+.|+... ++.|.+++.
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~ 73 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGSDGVIVLYDL 73 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEETTSCEEEEEC
T ss_pred cCCcEEEEEEecCCCCEEEEEcCCCeEEEEEC
Confidence 445688999999 999998885 677998864
No 114
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=32.24 E-value=1e+02 Score=19.86 Aligned_cols=29 Identities=10% Similarity=0.099 Sum_probs=23.0
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..++|+|+|+.|+..- |+.|.+++.
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~ 52 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSADKLIKIWGA 52 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred CCcEEEEEECCCCCEEEEeeCCCeEEEEeC
Confidence 34588899999999998875 577888863
No 115
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=31.30 E-value=26 Score=26.72 Aligned_cols=29 Identities=7% Similarity=0.000 Sum_probs=22.5
Q ss_pred CeeeeEEccCCCeEEEEE------cCCEEEEcCCC
Q psy14259 23 YLQHISWAPVDNALAFVY------NRDVYYSPSAT 51 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~------~nnly~~~~~~ 51 (79)
..-.+.|+|+|+.|-+.. +|.|.+++..+
T Consensus 504 ~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t 538 (567)
T 1qks_A 504 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKT 538 (567)
T ss_dssp EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred ceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCC
Confidence 466789999999887652 68999997543
No 116
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=30.67 E-value=1.1e+02 Score=19.85 Aligned_cols=29 Identities=24% Similarity=0.255 Sum_probs=22.3
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..++|||+|+.||-.. |+.|.+++.
T Consensus 254 ~~~v~~~~~s~~g~~las~~~D~~v~lw~~ 283 (297)
T 2pm7_B 254 PDVLWRASWSLSGNVLALSGGDNKVTLWKE 283 (297)
T ss_dssp SSCEEEEEECSSSCCEEEEETTSCEEEEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEEE
Confidence 34577889999999999875 567888753
No 117
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=30.63 E-value=1.1e+02 Score=20.86 Aligned_cols=28 Identities=4% Similarity=-0.179 Sum_probs=22.4
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEc
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSP 48 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~ 48 (79)
...+..++|||+|+.|+-.- |+.|.+++
T Consensus 127 ~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 127 DDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34577889999999998874 56788886
No 118
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=30.20 E-value=1e+02 Score=22.85 Aligned_cols=34 Identities=6% Similarity=0.124 Sum_probs=22.7
Q ss_pred eeeeEEccCCCeEEEEEc---CCEEEEcCCCCCCeE-Ee
Q psy14259 24 LQHISWAPVDNALAFVYN---RDVYYSPSATLQDIY-RL 58 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~~---nnly~~~~~~~~~~~-~l 58 (79)
-....|+|+|+.++||-+ |.|.+++. ...+.+ +|
T Consensus 372 P~gia~spDg~~~lyv~n~~s~~VsVID~-~t~kvv~tI 409 (426)
T 3c75_H 372 IDSINVSQDAEPLLYALSAGTQTLHIYDA-ATGEELRSV 409 (426)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEET-TTCCEEEEE
T ss_pred cCeEEEccCCCEEEEEEcCCCCeEEEEEC-CCCCEEEEe
Confidence 345688999996666644 78999974 444444 54
No 119
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=29.19 E-value=1.1e+02 Score=20.57 Aligned_cols=31 Identities=10% Similarity=0.086 Sum_probs=23.3
Q ss_pred CCCCeeeeEEccCCCeEEEE-EcCCEEEEcCC
Q psy14259 20 EAPYLQHISWAPVDNALAFV-YNRDVYYSPSA 50 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV-~~nnly~~~~~ 50 (79)
....+..+.|+|+|+.||-. .|+.|.+++..
T Consensus 63 H~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~ 94 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSF 94 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCeEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 34458889999999988877 45678888643
No 120
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=28.53 E-value=1.2e+02 Score=19.40 Aligned_cols=27 Identities=7% Similarity=0.055 Sum_probs=23.3
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
.+..+.|+|++..++-..++.|++.+.
T Consensus 258 ~v~~~~~~~~~~~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 258 IINALCFSPNRYWLCAATGPSIKIWDL 284 (340)
T ss_dssp CEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred eEEeeecCCCCceeeccCCCEEEEEEC
Confidence 477889999999999889999998863
No 121
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=28.45 E-value=1.4e+02 Score=20.08 Aligned_cols=25 Identities=8% Similarity=0.093 Sum_probs=20.1
Q ss_pred eeeeEEccCCCeEEEEE--cCCEEEEc
Q psy14259 24 LQHISWAPVDNALAFVY--NRDVYYSP 48 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~--~nnly~~~ 48 (79)
...+.|+|+++.+.|+- ++.|+..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d 77 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELH 77 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEE
Confidence 45789999999988885 46788886
No 122
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=28.17 E-value=1.1e+02 Score=24.31 Aligned_cols=28 Identities=11% Similarity=0.191 Sum_probs=24.3
Q ss_pred CeeeeEEccCCCeEEEEEcCCEEEEcCC
Q psy14259 23 YLQHISWAPVDNALAFVYNRDVYYSPSA 50 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~nnly~~~~~ 50 (79)
.+....|||+|+.++...++.+++.+..
T Consensus 800 ~v~~~~~s~dg~~l~~~~~~~v~~~d~~ 827 (1249)
T 3sfz_A 800 IVKCCSWSADGDKIIVAAKNKVLLFDIH 827 (1249)
T ss_dssp CBCCCCBCTTSSEEEEEETTEEEEEETT
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEec
Confidence 4667899999999999999999998743
No 123
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=28.08 E-value=84 Score=21.38 Aligned_cols=29 Identities=10% Similarity=0.207 Sum_probs=23.0
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..+.|||+|+.|+-.- |+.|.+++.
T Consensus 66 ~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~ 95 (380)
T 3iz6_a 66 SGKVYSLDWTPEKNWIVSASQDGRLIVWNA 95 (380)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred ccEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 44588899999999888774 577888864
No 124
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=27.71 E-value=1.3e+02 Score=19.80 Aligned_cols=6 Identities=0% Similarity=0.091 Sum_probs=2.4
Q ss_pred EccCCC
Q psy14259 29 WAPVDN 34 (79)
Q Consensus 29 wsP~g~ 34 (79)
|+|+|+
T Consensus 263 ~~~~g~ 268 (305)
T 3dr2_A 263 FDSDGQ 268 (305)
T ss_dssp ECTTSC
T ss_pred ECCCCC
Confidence 344443
No 125
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=27.31 E-value=1.4e+02 Score=19.90 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=22.6
Q ss_pred CCCCeeeeEEccCCCeEEEEE-cCCEEEEc
Q psy14259 20 EAPYLQHISWAPVDNALAFVY-NRDVYYSP 48 (79)
Q Consensus 20 ~~~~~q~a~wsP~g~~lafV~-~nnly~~~ 48 (79)
....+..++|||+|+.||-.- |+.+.+++
T Consensus 60 h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~ 89 (345)
T 3fm0_A 60 HQRTVRKVAWSPCGNYLASASFDATTCIWK 89 (345)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEEECCCcEEEEE
Confidence 344588899999999998874 56777775
No 126
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=27.25 E-value=1.3e+02 Score=19.63 Aligned_cols=27 Identities=26% Similarity=0.310 Sum_probs=19.7
Q ss_pred CCeeeeEEccCCCeEEEEE--cCCEEEEc
Q psy14259 22 PYLQHISWAPVDNALAFVY--NRDVYYSP 48 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~--~nnly~~~ 48 (79)
....-+.|+|+++.|.|+- ++.||..+
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d 41 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWD 41 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEE
Confidence 3456788999888888884 46677775
No 127
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=26.74 E-value=1.4e+02 Score=19.67 Aligned_cols=29 Identities=10% Similarity=0.229 Sum_probs=23.4
Q ss_pred CCCeeeeEEccCCCeEEEEEc----CCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVYN----RDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~----nnly~~~~ 49 (79)
...+..+.|+|+|+.|+.... +.|++++.
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~ 265 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET 265 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEET
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEEC
Confidence 445889999999999988865 57888864
No 128
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=26.68 E-value=77 Score=22.81 Aligned_cols=38 Identities=5% Similarity=-0.141 Sum_probs=24.8
Q ss_pred eeeeEEccCCCeEEEEE---cCCEEEEcCCCCCCeE-EeccCC
Q psy14259 24 LQHISWAPVDNALAFVY---NRDVYYSPSATLQDIY-RLSNTG 62 (79)
Q Consensus 24 ~q~a~wsP~g~~lafV~---~nnly~~~~~~~~~~~-~lT~dG 62 (79)
-..+.|+|+|+.+.++. +|.|.+++. ...+.+ +|...+
T Consensus 316 p~gi~~s~Dg~~l~va~~~~~~~VsVID~-~t~kvv~~I~vg~ 357 (368)
T 1mda_H 316 SDAIIAAQDGASDNYANSAGTEVLDIYDA-ASDQDQSSVELDK 357 (368)
T ss_dssp ECEEEECCSSSCEEEEEETTTTEEEEEES-SSCEEEEECCCCS
T ss_pred cceEEECCCCCEEEEEccCCCCeEEEEEC-CCCcEEEEEECCC
Confidence 45678999999777775 478999974 444344 444333
No 129
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=25.23 E-value=1.5e+02 Score=19.61 Aligned_cols=27 Identities=11% Similarity=0.089 Sum_probs=21.4
Q ss_pred CeeeeEEccCCCeEEEEEc-CCEEEEcC
Q psy14259 23 YLQHISWAPVDNALAFVYN-RDVYYSPS 49 (79)
Q Consensus 23 ~~q~a~wsP~g~~lafV~~-nnly~~~~ 49 (79)
.+..+.|||+|+.|+-..+ +.|.+++.
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 4778899999999888754 56888863
No 130
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=25.17 E-value=58 Score=23.88 Aligned_cols=26 Identities=4% Similarity=-0.006 Sum_probs=17.5
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEc
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSP 48 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~ 48 (79)
..+..++|||+| .++=..++++....
T Consensus 163 ~~Vs~v~WSpkG-~~vg~~dg~i~~~~ 188 (388)
T 1xip_A 163 QNVTSFDVTNSQ-LAVLLKDRSFQSFA 188 (388)
T ss_dssp ESEEEEEECSSE-EEEEETTSCEEEEE
T ss_pred CCceEEEEcCCc-eEEEEcCCcEEEEc
Confidence 358899999999 33333556666663
No 131
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=25.12 E-value=1.3e+02 Score=22.05 Aligned_cols=40 Identities=10% Similarity=0.308 Sum_probs=27.1
Q ss_pred eeeEEccCCCeEEEEE---cCCEEEEcCCCCCCeEEeccCCCc
Q psy14259 25 QHISWAPVDNALAFVY---NRDVYYSPSATLQDIYRLSNTGSE 64 (79)
Q Consensus 25 q~a~wsP~g~~lafV~---~nnly~~~~~~~~~~~~lT~dG~~ 64 (79)
....+||+|+.+.|+- +|+|.+++........+|...|.+
T Consensus 334 ~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p 376 (386)
T 3sjl_D 334 DSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG 376 (386)
T ss_dssp CEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS
T ss_pred ceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC
Confidence 3578899998788884 477999975443333356555555
No 132
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=24.88 E-value=1.5e+02 Score=19.41 Aligned_cols=29 Identities=3% Similarity=-0.025 Sum_probs=23.2
Q ss_pred CCCeeeeEEccCCCeEEEEE-cCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVY-NRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~-~nnly~~~~ 49 (79)
...+..+.|+|+++.|+... ++.|++++.
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSCEEEECS
T ss_pred CCceEEEEECCCCCEEEEEcCCCEEEEEEC
Confidence 34578899999999988886 577888863
No 133
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=23.73 E-value=1.7e+02 Score=21.72 Aligned_cols=28 Identities=7% Similarity=0.078 Sum_probs=24.5
Q ss_pred CCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 22 PYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 22 ~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
..+....|||++..|+-..++.|.+++.
T Consensus 603 ~~v~~~~~sp~~~~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 603 SVIHALCFSPNRYWLCAATEHGIKIWDL 630 (694)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEET
T ss_pred CcEEEEEEcCCCcEEEEEcCCCEEEEEC
Confidence 3578899999999999999999999964
No 134
>2od0_A Hypothetical protein VP1028; structural genomics, unknown functi 2, protein structure initiative, midwest center for structu genomics; 1.95A {Vibrio parahaemolyticus} SCOP: d.198.5.2
Probab=23.72 E-value=49 Score=19.65 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=18.5
Q ss_pred EEccCCCeEEEEEcCCEEEEcC
Q psy14259 28 SWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 28 ~wsP~g~~lafV~~nnly~~~~ 49 (79)
.+-=+|+-++.|.++.||++..
T Consensus 29 ~l~~~g~mfalv~d~~L~lR~~ 50 (105)
T 2od0_A 29 GLFADETMFALVVNNQLHIRAD 50 (105)
T ss_dssp EEEETTEEEEEEETTEEEEECC
T ss_pred EEEECCEEEEEEECCEEEEEeC
Confidence 4555789999999999999964
No 135
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=21.86 E-value=93 Score=22.49 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=23.7
Q ss_pred CCCeEEEEEcCCEEEEcC------------CCCCCeEEeccCCC
Q psy14259 32 VDNALAFVYNRDVYYSPS------------ATLQDIYRLSNTGS 63 (79)
Q Consensus 32 ~g~~lafV~~nnly~~~~------------~~~~~~~~lT~dG~ 63 (79)
.++.|+|-.|+.||+... ...++..||+.||+
T Consensus 141 ~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ 184 (347)
T 3das_A 141 NGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGE 184 (347)
T ss_dssp CCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSS
T ss_pred cCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCC
Confidence 356788888899998842 11356889999987
No 136
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=21.74 E-value=80 Score=24.94 Aligned_cols=28 Identities=21% Similarity=0.347 Sum_probs=23.8
Q ss_pred CCCeeeeEEccCCCeEEEEEcCCEEEEcC
Q psy14259 21 APYLQHISWAPVDNALAFVYNRDVYYSPS 49 (79)
Q Consensus 21 ~~~~q~a~wsP~g~~lafV~~nnly~~~~ 49 (79)
...+-..+|||+| .++.-.||-+++++.
T Consensus 182 ~~~V~sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 182 KDWVTHIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp CCCEEEEEEETTE-EEEEETTCCEEEECC
T ss_pred cccEEEEEEcCCc-EEEEeCCCeEEEEEC
Confidence 3468889999999 888889999999963
No 137
>2bw2_A Bypass of forespore C; sporulation, signaling protein, BOFC, sigmak checkpoint; NMR {Bacillus subtilis}
Probab=20.53 E-value=28 Score=22.88 Aligned_cols=20 Identities=20% Similarity=0.340 Sum_probs=16.8
Q ss_pred CCeEEeccCCCceeEecccc
Q psy14259 53 QDIYRLSNTGSEVVSNGVPD 72 (79)
Q Consensus 53 ~~~~~lT~dG~~~i~nG~~D 72 (79)
....=|+.||.-++|+|.|.
T Consensus 72 ngY~Gi~~dG~LslF~G~P~ 91 (140)
T 2bw2_A 72 NGYIGVSDNGVISTFHGRPE 91 (140)
T ss_dssp CCCEEEETTTEEEEBSSSCS
T ss_pred CceEEEecCCeEEEEeCCCc
Confidence 34678899999999999995
No 138
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=20.37 E-value=1.5e+02 Score=18.22 Aligned_cols=24 Identities=8% Similarity=0.036 Sum_probs=15.4
Q ss_pred EEEEEcCCEEEEcCCC-CCCeEEec
Q psy14259 36 LAFVYNRDVYYSPSAT-LQDIYRLS 59 (79)
Q Consensus 36 lafV~~nnly~~~~~~-~~~~~~lT 59 (79)
-|++.+|.|++.-... .+-.++||
T Consensus 32 ~A~id~~~L~I~F~~~~~~vtItI~ 56 (108)
T 3d33_A 32 TVFTDGYLLTLKNASPDRDMTIRIT 56 (108)
T ss_dssp EEEEETTEEEEEESSCCSEEEEEEE
T ss_pred EEEEECCEEEEEECCcCCCEEEEEE
Confidence 5788888888775322 34455777
Done!