Query psy14260
Match_columns 73
No_of_seqs 108 out of 877
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 23:29:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14260.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14260hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sov_A LRP-6, low-density lipo 99.8 4.5E-18 1.5E-22 107.5 10.8 73 1-73 195-268 (318)
2 3v64_C Agrin; beta propeller, 99.8 4.3E-18 1.5E-22 108.4 10.7 73 1-73 232-305 (349)
3 3p5b_L Low density lipoprotein 99.8 3.7E-18 1.3E-22 110.4 10.5 73 1-73 275-350 (400)
4 3m0c_C LDL receptor, low-densi 99.8 7.4E-18 2.5E-22 116.9 10.7 73 1-73 587-662 (791)
5 3v65_B Low-density lipoprotein 99.7 1.6E-17 5.6E-22 106.8 10.7 73 1-73 275-348 (386)
6 3s94_A LRP-6, low-density lipo 99.7 4.7E-18 1.6E-22 115.2 6.1 73 1-73 200-273 (619)
7 1ijq_A LDL receptor, low-densi 99.7 1.6E-16 5.5E-21 99.7 10.7 73 1-73 193-268 (316)
8 3s94_A LRP-6, low-density lipo 99.7 1.2E-16 4E-21 108.3 10.2 68 1-69 508-576 (619)
9 4a0p_A LRP6, LRP-6, low-densit 99.7 3.3E-16 1.1E-20 106.3 10.7 70 1-71 195-265 (628)
10 4a0p_A LRP6, LRP-6, low-densit 99.7 6E-16 2.1E-20 105.1 9.3 68 1-68 506-574 (628)
11 1n7d_A LDL receptor, low-densi 99.6 1E-15 3.5E-20 104.8 4.8 73 1-73 569-644 (699)
12 3sov_A LRP-6, low-density lipo 99.0 4.7E-09 1.6E-13 66.2 10.0 63 1-64 152-218 (318)
13 3s25_A Hypothetical 7-bladed b 99.0 1.5E-09 5.1E-14 68.3 7.1 48 1-52 253-300 (302)
14 3p5b_L Low density lipoprotein 99.0 7.8E-09 2.7E-13 66.8 9.7 63 1-64 232-300 (400)
15 3m0c_C LDL receptor, low-densi 98.9 9.3E-09 3.2E-13 71.7 9.8 63 1-64 544-612 (791)
16 3v64_C Agrin; beta propeller, 98.9 1.1E-08 3.8E-13 64.9 8.6 62 1-63 189-254 (349)
17 3v65_B Low-density lipoprotein 98.9 1.3E-08 4.4E-13 65.4 8.9 62 1-63 232-297 (386)
18 1ijq_A LDL receptor, low-densi 98.8 4.5E-08 1.5E-12 61.2 9.8 62 1-63 150-217 (316)
19 1npe_A Nidogen, entactin; glyc 98.7 9.3E-08 3.2E-12 57.8 8.6 67 2-70 197-265 (267)
20 1n7d_A LDL receptor, low-densi 98.5 3.9E-07 1.3E-11 62.6 6.7 63 1-64 526-594 (699)
21 1npe_A Nidogen, entactin; glyc 98.3 1E-05 3.5E-10 48.7 8.8 62 1-63 153-217 (267)
22 3s25_A Hypothetical 7-bladed b 97.6 0.00019 6.7E-09 45.0 6.0 50 1-54 214-264 (302)
23 3tc9_A Hypothetical hydrolase; 95.0 0.085 2.9E-06 34.2 6.1 48 14-62 225-277 (430)
24 1rwi_B Serine/threonine-protei 94.9 0.16 5.4E-06 29.7 6.8 49 13-62 190-241 (270)
25 4hw6_A Hypothetical protein, I 94.4 0.18 6E-06 32.8 6.6 48 13-62 137-189 (433)
26 3hrp_A Uncharacterized protein 94.4 0.42 1.4E-05 30.6 8.3 38 14-52 322-361 (409)
27 3fvz_A Peptidyl-glycine alpha- 93.9 0.54 1.8E-05 28.8 7.8 39 14-52 195-235 (329)
28 2iwa_A Glutamine cyclotransfer 93.5 0.77 2.6E-05 28.3 8.8 39 15-53 66-104 (266)
29 3tc9_A Hypothetical hydrolase; 93.4 0.27 9.3E-06 31.8 6.1 48 13-62 135-186 (430)
30 3fvz_A Peptidyl-glycine alpha- 92.7 0.81 2.8E-05 27.9 7.3 39 13-52 141-182 (329)
31 3hrp_A Uncharacterized protein 92.5 0.65 2.2E-05 29.7 6.9 30 16-46 267-299 (409)
32 1rwi_B Serine/threonine-protei 92.0 0.65 2.2E-05 27.0 6.0 29 13-41 106-135 (270)
33 4hw6_A Hypothetical protein, I 91.2 0.3 1E-05 31.7 4.2 28 14-41 401-430 (433)
34 2p4o_A Hypothetical protein; p 90.6 0.95 3.3E-05 27.4 5.9 29 15-43 32-61 (306)
35 3dsm_A Uncharacterized protein 90.5 1.3 4.6E-05 27.1 6.5 48 15-62 44-91 (328)
36 2p4o_A Hypothetical protein; p 89.9 2.1 7.2E-05 25.8 7.7 31 13-43 167-197 (306)
37 2qc5_A Streptogramin B lactona 89.4 2 7E-05 25.0 7.6 49 13-62 186-237 (300)
38 3mbr_X Glutamine cyclotransfer 88.8 2.7 9.4E-05 25.6 8.8 38 16-53 64-103 (243)
39 3kya_A Putative phosphatase; s 88.5 1.3 4.3E-05 29.8 5.6 30 14-43 246-277 (496)
40 3dsm_A Uncharacterized protein 88.3 1.2 4.2E-05 27.2 5.2 54 15-69 267-326 (328)
41 3nol_A Glutamine cyclotransfer 87.7 3.5 0.00012 25.5 9.0 39 15-53 85-125 (262)
42 2ism_A Putative oxidoreductase 87.3 2.4 8.3E-05 26.5 6.2 29 15-43 268-296 (352)
43 2z2n_A Virginiamycin B lyase; 87.0 3.1 0.0001 24.2 7.7 34 13-47 139-173 (299)
44 3kya_A Putative phosphatase; s 86.9 1.8 6E-05 29.1 5.5 30 13-42 442-473 (496)
45 2qc5_A Streptogramin B lactona 86.8 3.2 0.00011 24.1 7.8 49 13-62 228-279 (300)
46 3nok_A Glutaminyl cyclase; bet 86.5 4.2 0.00014 25.3 7.9 38 16-53 95-134 (268)
47 3g4e_A Regucalcin; six bladed 85.0 3.3 0.00011 24.7 5.8 47 15-61 199-247 (297)
48 3g4e_A Regucalcin; six bladed 85.0 4.4 0.00015 24.2 9.0 39 7-45 5-45 (297)
49 3dr2_A Exported gluconolactona 84.6 4.7 0.00016 24.1 8.6 42 3-46 34-77 (305)
50 2z2n_A Virginiamycin B lyase; 84.1 4.5 0.00015 23.5 7.6 33 13-46 181-214 (299)
51 3e5z_A Putative gluconolactona 84.1 4.8 0.00016 23.8 7.8 42 3-45 17-60 (296)
52 1q7f_A NHL, brain tumor CG1071 83.0 5.1 0.00018 23.4 7.9 49 13-62 119-171 (286)
53 2iwa_A Glutamine cyclotransfer 82.4 6.5 0.00022 24.1 6.4 39 14-52 151-189 (266)
54 2qe8_A Uncharacterized protein 82.2 3.4 0.00012 25.4 5.0 39 13-51 65-109 (343)
55 1q7f_A NHL, brain tumor CG1071 81.3 6.1 0.00021 23.1 7.8 49 13-62 162-214 (286)
56 2fp8_A Strictosidine synthase; 80.9 7 0.00024 23.5 6.4 30 14-43 184-215 (322)
57 3nok_A Glutaminyl cyclase; bet 71.7 15 0.00052 22.7 6.2 38 15-52 181-218 (268)
58 3das_A Putative oxidoreductase 70.0 18 0.00063 23.0 8.1 38 9-46 26-64 (347)
59 3nol_A Glutamine cyclotransfer 69.4 17 0.00059 22.4 6.2 38 15-52 172-209 (262)
60 2ghs_A AGR_C_1268P; regucalcin 68.2 17 0.00059 22.0 7.8 38 8-45 42-81 (326)
61 2ism_A Putative oxidoreductase 67.3 20 0.00068 22.3 7.7 31 10-41 26-57 (352)
62 2mad_H Methylamine dehydrogena 67.1 21 0.00071 22.5 7.0 49 16-64 319-371 (373)
63 3das_A Putative oxidoreductase 66.1 23 0.00078 22.6 6.3 48 15-62 263-315 (347)
64 3a9g_A Putative uncharacterize 65.4 22 0.00076 22.2 8.4 35 10-46 24-59 (354)
65 2fp8_A Strictosidine synthase; 64.8 20 0.00069 21.5 6.1 29 14-42 283-311 (322)
66 3mbr_X Glutamine cyclotransfer 63.5 22 0.00076 21.6 6.2 38 15-52 150-187 (243)
67 1cru_A Protein (soluble quinop 62.6 29 0.001 22.6 6.7 41 5-46 18-59 (454)
68 3sre_A PON1, serum paraoxonase 61.6 12 0.00042 23.8 4.0 56 6-63 213-274 (355)
69 2qe8_A Uncharacterized protein 57.0 25 0.00084 21.4 4.8 33 15-47 120-157 (343)
70 1pjx_A Dfpase, DIISOPROPYLFLUO 51.3 34 0.0012 19.9 6.3 48 15-62 226-275 (314)
71 3a9g_A Putative uncharacterize 50.7 43 0.0015 20.9 5.9 29 15-43 259-295 (354)
72 3vgz_A Uncharacterized protein 46.5 43 0.0015 19.7 5.7 38 15-52 272-311 (353)
73 3sjl_D Methylamine dehydrogena 44.1 63 0.0021 20.9 6.6 47 16-62 332-381 (386)
74 2oiz_A Aromatic amine dehydrog 42.6 58 0.002 20.0 5.5 44 17-62 307-355 (361)
75 1mda_H Methylamine dehydrogena 40.8 57 0.002 20.7 4.6 47 16-62 315-364 (368)
76 2in5_A Hypothetical lipoprotei 38.1 20 0.00067 21.3 2.0 39 26-64 165-204 (207)
77 2g8s_A Glucose/sorbosone dehyd 36.4 59 0.002 20.2 4.2 30 16-45 272-309 (353)
78 1bzk_A Protein (BAND 3 anion t 36.2 1.3 4.5E-05 20.1 -2.6 8 28-35 6-13 (43)
79 2dg1_A DRP35, lactonase; beta 34.0 73 0.0025 18.7 7.8 34 13-46 43-77 (333)
80 3e5z_A Putative gluconolactona 29.0 88 0.003 18.1 8.1 31 12-43 169-201 (296)
81 3q6k_A 43.2 kDa salivary prote 26.9 1.3E+02 0.0045 19.4 4.8 28 24-51 170-197 (381)
82 2eqj_A Metal-response element- 22.8 75 0.0026 15.5 2.3 19 16-34 42-60 (66)
No 1
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.77 E-value=4.5e-18 Score=107.51 Aligned_cols=73 Identities=27% Similarity=0.567 Sum_probs=66.8
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++++...+.+|++|+++++.+||+||..+.|.++++.+|+..+++.... .|++|+++|+.+||.+.|
T Consensus 195 ~dG~~~~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v~~~~~q~~~~n 268 (318)
T 3sov_A 195 LDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATN 268 (318)
T ss_dssp TTSCSCEEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEEECGGGSCCCCC
T ss_pred CCCCceEEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEEecccccccccc
Confidence 5899999988767899999999999999999999999999999999988888776 999999999999997654
No 2
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.77 E-value=4.3e-18 Score=108.37 Aligned_cols=73 Identities=32% Similarity=0.537 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++++...+.||++|++++++|||+||..+.|.++++.+|+..+++.... .|++|+++|+.+||.+.|
T Consensus 232 ~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~qp~~~n 305 (349)
T 3v64_C 232 LDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKN 305 (349)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEECGGGSCCCCC
T ss_pred CCCCceEEEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEEEccccCccccC
Confidence 5899999988777899999999999999999999999999999999999988777 999999999999998754
No 3
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.77 E-value=3.7e-18 Score=110.43 Aligned_cols=73 Identities=21% Similarity=0.410 Sum_probs=66.9
Q ss_pred CCCCCeEEEEcC--CCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKP--VVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~--~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++++.. .+.||++|++++++|||+||..+.|.+++|.+|+...++.... .|++|+++|+.+||.+.|
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~~~~~qp~~~n 350 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVN 350 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEESGGGSCCCCC
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEEeeccCCCCCC
Confidence 589999998874 5789999999999999999999999999999999999988777 899999999999997765
No 4
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.76 E-value=7.4e-18 Score=116.91 Aligned_cols=73 Identities=21% Similarity=0.410 Sum_probs=67.4
Q ss_pred CCCCCeEEEEcC--CCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKP--VVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~--~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++|+.. .+.||++|++++++|||+||.+..|++++|++|++..++.... .|++|+|||+.+||.+.|
T Consensus 587 ~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~v~h~~~Qp~~~N 662 (791)
T 3m0c_C 587 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVN 662 (791)
T ss_dssp TTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCC
T ss_pred cCCCceEEEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEeeeccccCCCCCC
Confidence 689999999874 6789999999999999999999999999999999999998777 999999999999998765
No 5
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.75 E-value=1.6e-17 Score=106.81 Aligned_cols=73 Identities=32% Similarity=0.537 Sum_probs=67.3
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++++...+.||++|+++++.|||+||..+.|.++++.+|+..+++.... .|++|+++|+.+||.+.|
T Consensus 275 ~dG~~~~~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v~~~~~q~~~~n 348 (386)
T 3v65_B 275 LDGSHRKAVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGKN 348 (386)
T ss_dssp TTSCSCEEEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEEESGGGSCCCCC
T ss_pred CCCCeeEEEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEEEchhcCcCCcC
Confidence 5899999888777899999999999999999999999999999999999988777 999999999999998765
No 6
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.73 E-value=4.7e-18 Score=115.17 Aligned_cols=73 Identities=27% Similarity=0.567 Sum_probs=58.9
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|+++..+.+.||++|++|+++|||+||.+..|++++|++|++..++.... .|++|+++|+.+||.+.|
T Consensus 200 ~dG~~~~~~~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n 273 (619)
T 3s94_A 200 LDGTNRQAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATN 273 (619)
T ss_dssp SSCCEEC---------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCC
T ss_pred CCCCccEEEEeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccc
Confidence 5899999988767899999999999999999999999999999999988887776 999999999999997643
No 7
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.71 E-value=1.6e-16 Score=99.71 Aligned_cols=73 Identities=21% Similarity=0.410 Sum_probs=65.6
Q ss_pred CCCCCeEEEEcC--CCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKP--VVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~--~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|+++... .+.||++|++++++|||+||..+.|.++++++|+..+++.... .|++|+++|+.+||.+.|
T Consensus 193 ~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~~~~~p~~i~v~~~~~qp~~~n 268 (316)
T 1ijq_A 193 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHNLTQPRGVN 268 (316)
T ss_dssp TTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEEEESGGGSCCCCC
T ss_pred cCCCceEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEecCCCCceEEEEeccccCCcccc
Confidence 589999998763 5789999999999999999999999999999999988888776 899999999999997644
No 8
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.70 E-value=1.2e-16 Score=108.34 Aligned_cols=68 Identities=19% Similarity=0.363 Sum_probs=61.5
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQP 69 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp 69 (73)
+||++|++++...+.||+|||+++++|||+||...+|++++|.+| +.+++.... .|++|+++|+.+|+
T Consensus 508 ~dG~~~~~~~~~~l~~P~glav~~~~ly~tD~~~~~I~~~~k~~g-~~~~~~~~~~~~~~i~~~~~~~~~ 576 (619)
T 3s94_A 508 TDGTGRRVLVEDKIPHIFGFTLLGDYVYWTDWQRRSIERVHKRSA-EREVIIDQLPDLMGLKATNVHRVI 576 (619)
T ss_dssp SSSCCCEEEEECCCCSSCCEEEETTEEEEECTTSSCEEEEESSSC-CEEEEECSCCCEEEEEEEESSCCC
T ss_pred cCCCceEEEeccCCCCcEEEEEECCEEEEeecCCCeEEEEEcCCC-ceEEEecCCCCCceeeeccccccc
Confidence 589999999887789999999999999999999999999999999 667777666 89999999988776
No 9
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.68 E-value=3.3e-16 Score=106.34 Aligned_cols=70 Identities=20% Similarity=0.403 Sum_probs=62.8
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDD 71 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~ 71 (73)
+||++|+++.. .+.||++|++|+++|||+||..+.|.+++|.+|++.+++.... .|++|+++|+.+||..
T Consensus 195 ~dG~~~~v~~~-~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~ 265 (628)
T 4a0p_A 195 MLGLNREVIAD-DLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGW 265 (628)
T ss_dssp TTSCSCEEEEE-CCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCC
T ss_pred CCCCceEEeec-cCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEecCCCCcceeeeeeecccccc
Confidence 58999976544 5889999999999999999999999999999999998888777 8999999999999853
No 10
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.66 E-value=6e-16 Score=105.09 Aligned_cols=68 Identities=18% Similarity=0.187 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQ 68 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~q 68 (73)
+||++|+++....+.||++|++|+++|||+||...+|++++|.+|++...+.... .|++|.++|...|
T Consensus 506 ~dG~~r~~~~~~~~~~P~glav~~~~ly~tD~~~~~i~~~~k~~G~~~~~i~~~~~~~~~i~~~~~~~~ 574 (628)
T 4a0p_A 506 LSGANRIVLEDSNILQPVGLTVFENWLYWIDKQQQMIEKIDMTGREGRTKVQARIAQLSDIHAVKELNL 574 (628)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTEEEEEETTTTEEEEEETTSSSCCEEEECCCTTEEEEEEECCCCH
T ss_pred CCCCceEEEEcCCCCCcEEEEEECCEEEEEECCCCeEEEEECcCCCCcEEEeccCCCCcceEEEeeccc
Confidence 5899999988777899999999999999999999999999999999999888877 8999999997654
No 11
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.59 E-value=1e-15 Score=104.79 Aligned_cols=73 Identities=21% Similarity=0.416 Sum_probs=65.1
Q ss_pred CCCCCeEEEEcC--CCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEecCCCCCCCC
Q psy14260 1 MAQMKNKVLVKP--VVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYHRQKQPDDIK 73 (73)
Q Consensus 1 ~dG~~r~~v~~~--~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h~~~qp~~~~ 73 (73)
+||++|++++.. .+.||++|++++++|||+||..+.|.++++++|+..+++.... .|++|+|+|+.+||.+.|
T Consensus 569 ~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~~~~qp~~~n 644 (699)
T 1n7d_A 569 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFHQLTQPRGVN 644 (699)
T ss_dssp SSSSCCEEECCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCSSSSSCCSCC
T ss_pred cCCCceEEEEecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeCcccCCCCCC
Confidence 589999998863 5789999999999999999999999999999998888777666 899999999999998764
No 12
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.01 E-value=4.7e-09 Score=66.15 Aligned_cols=63 Identities=14% Similarity=0.269 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEec-CC-CcceEEEEe
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIAN-FS-RPFAIHIYH 64 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~-~~-~~~~i~v~h 64 (73)
|||+.+++++...+..|.+|++- ++.|||+|+....|++++ +.|.+++++.. .. .|++|.++.
T Consensus 152 ~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d-~dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 152 MDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN-LDGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-TTSCSCEEEECSCCSCEEEEEEET
T ss_pred cCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEc-CCCCceEEEecCCCCCceEEEEeC
Confidence 68999999887778999999985 899999999999999999 67888887775 34 899998864
No 13
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.99 E-value=1.5e-09 Score=68.33 Aligned_cols=48 Identities=15% Similarity=0.102 Sum_probs=41.1
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
+||++|+.|..+ ...+|++|||+|||+||.+.+|.+++ .+|.+..++.
T Consensus 253 ~DG~~r~~l~~~---~~~~i~i~~d~Iy~td~~~~~i~~~~-~dGs~~~~l~ 300 (302)
T 3s25_A 253 NDGTGFKELAKG---EFCNINVTSQYVYFTDFVSNKEYCTS-TQNPDTIKAL 300 (302)
T ss_dssp TTSCCCEEEEES---CEEEEEECSSEEEEEETTTCCEEEEE-SSSCCSCEEC
T ss_pred CCCCccEEeeCC---ccceEEEeCCEEEEEECCCCeEEEEE-CCCCCceEec
Confidence 699999998775 35689999999999999999999986 8888776654
No 14
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.96 E-value=7.8e-09 Score=66.80 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecC---C-CcceEEEEe
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANF---S-RPFAIHIYH 64 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~---~-~~~~i~v~h 64 (73)
|||+.+++++...+.+|.+|++- ++.|||+|+....|.+++ +.|.+++++... . .|++|.++.
T Consensus 232 ~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d-~dG~~~~~~~~~~~~l~~P~gl~v~~ 300 (400)
T 3p5b_L 232 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID-VNGGNRKTILEDEKRLAHPFSLAVFE 300 (400)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-TTSCCCEEEEECSSTTSSEEEEEEET
T ss_pred CCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEe-CCCCccEEEEeCCCCCCCCEEEEEeC
Confidence 79999999888778999999986 799999999999999999 678887777643 3 789988754
No 15
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.93 E-value=9.3e-09 Score=71.71 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=54.0
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecC---C-CcceEEEEe
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANF---S-RPFAIHIYH 64 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~---~-~~~~i~v~h 64 (73)
|||+.|++++...+.+|.+|++- ++.|||+|+....|.+++ +.|..+.++... . .|++|.++.
T Consensus 544 ~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d-~dG~~~~~v~~~~~~l~~P~glav~~ 612 (791)
T 3m0c_C 544 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID-VNGGNRKTILEDEKRLAHPFSLAVFE 612 (791)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-TTSCSCEEEEECTTTTSSEEEEEEET
T ss_pred cCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEe-cCCCceEEEecCCCccCCCCEEEEeC
Confidence 79999999988788999999976 899999999999999999 678888877753 3 788888754
No 16
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.90 E-value=1.1e-08 Score=64.94 Aligned_cols=62 Identities=15% Similarity=0.278 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecC-C-CcceEEEE
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANF-S-RPFAIHIY 63 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~-~-~~~~i~v~ 63 (73)
|||+.+++++...+..|.+|++- ++.|||+|+....|.+++ +.|.+++++... . .|++|.++
T Consensus 189 ~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~-~dG~~~~~~~~~~~~~P~giav~ 254 (349)
T 3v64_C 189 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN-LDGSHRKAVISQGLPHPFAITVF 254 (349)
T ss_dssp TTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-TTSCSCEEEECSSCSSEEEEEEE
T ss_pred CCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe-CCCCceEEEEeCCCCCceEEEEE
Confidence 68999998877678899999985 899999999999999999 678777766644 4 89999884
No 17
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.89 E-value=1.3e-08 Score=65.38 Aligned_cols=62 Identities=15% Similarity=0.290 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcCCCCCceEEEE--ECCEEEEEeCCCCeEEEEeCcCCCCeEEEecC-C-CcceEEEE
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITV--FENNLFVTSWRNQSIIRVNKYNSDDYETIANF-S-RPFAIHIY 63 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~v--fe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~-~-~~~~i~v~ 63 (73)
|||+.+++++...+..|.+|++ .++.|||+|+....|.+++ +.|.+++++... . .|.+|.++
T Consensus 232 ~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d-~dG~~~~~~~~~~~~~P~giav~ 297 (386)
T 3v65_B 232 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN-LDGSHRKAVISQGLPHPFAITVF 297 (386)
T ss_dssp TTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEEC-TTSCSCEEEECSSCSSEEEEEEE
T ss_pred CCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEe-CCCCeeEEEEECCCCCceEEEEE
Confidence 6899999988777889999998 4899999999999999999 677777766643 4 89999884
No 18
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.84 E-value=4.5e-08 Score=61.23 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=52.4
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecC---C-CcceEEEE
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANF---S-RPFAIHIY 63 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~---~-~~~~i~v~ 63 (73)
|||+.++++....+.+|.+|++- ++.|||+|+....|.+++ +.|.+++++... . .|.+|.++
T Consensus 150 ~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d-~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 150 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID-VNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp TTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE-TTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred CCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEe-cCCCceEEEeecCCccCCcEEEEEE
Confidence 68999998877678899999986 789999999999999999 668887777642 3 79999885
No 19
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.74 E-value=9.3e-08 Score=57.79 Aligned_cols=67 Identities=25% Similarity=0.436 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCCCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC--CcceEEEEecCCCCC
Q psy14260 2 AQMKNKVLVKPVVQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFS--RPFAIHIYHRQKQPD 70 (73)
Q Consensus 2 dG~~r~~v~~~~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~--~~~~i~v~h~~~qp~ 70 (73)
||..++.++. ...+|++|++.+++|||+||....|.+++..+|+....+.... .|.+|.+..... |.
T Consensus 197 ~g~~~~~~~~-~~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~-~~ 265 (267)
T 1npe_A 197 AQPGRRKVLE-GLQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC-PQ 265 (267)
T ss_dssp TEEEEEEEEE-CCCSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC---
T ss_pred CCCceEEEec-CCCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC-CC
Confidence 5666666665 4689999999999999999999999999987787777776443 699999876433 44
No 20
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.47 E-value=3.9e-07 Score=62.64 Aligned_cols=63 Identities=21% Similarity=0.272 Sum_probs=51.4
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecC---C-CcceEEEEe
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANF---S-RPFAIHIYH 64 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~---~-~~~~i~v~h 64 (73)
|||+.+++++...+..|.+|++- ++.|||+|+....|.+++ +.|.+++++... . .|.+|.++.
T Consensus 526 ~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d-~dG~~~~~~~~~~~~~~~P~glavd~ 594 (699)
T 1n7d_A 526 LNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSID-VNGGNRKTILEDEKRLAHPFSLAVFE 594 (699)
T ss_dssp SSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEEC-SSSSCCEEECCCSSSCSSCCCCEEET
T ss_pred CCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEc-cCCCceEEEEecCCcCCCceEeEEEC
Confidence 68999988877678899999985 789999999999999999 668787777643 3 688877653
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.27 E-value=1e-05 Score=48.74 Aligned_cols=62 Identities=15% Similarity=0.129 Sum_probs=47.6
Q ss_pred CCCCCeEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEE
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIY 63 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~ 63 (73)
+||+.++++....+.+|.+|++- +++|||+|+..+.|.+++. .|.....+.... .|.+|.+.
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~-~g~~~~~~~~~~~~P~gi~~d 217 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNP-AQPGRRKVLEGLQYPFAVTSY 217 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEET-TEEEEEEEEECCCSEEEEEEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEec-CCCceEEEecCCCCceEEEEe
Confidence 57888887765567899999985 5799999999999999984 455555555444 78888654
No 22
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.59 E-value=0.00019 Score=44.97 Aligned_cols=50 Identities=14% Similarity=0.219 Sum_probs=37.4
Q ss_pred CCCCCeEEEEcCCCCCceEEEEECCEEEEEe-CCCCeEEEEeCcCCCCeEEEecC
Q psy14260 1 MAQMKNKVLVKPVVQNLYDITVFENNLFVTS-WRNQSIIRVNKYNSDDYETIANF 54 (73)
Q Consensus 1 ~dG~~r~~v~~~~~~~p~~l~vfe~~lywtD-w~~~~i~~~~k~~g~~~~~~~~~ 54 (73)
|||+++++|.+..+ | .+++.+++|||++ -....|.+++ ..|.+++.+...
T Consensus 214 ldG~~~~~Lt~~~~--~-~~~~~g~~Iy~~~~~~~~~i~~~~-~DG~~r~~l~~~ 264 (302)
T 3s25_A 214 INNPNPVVLTEANI--E-HYNVYGSLIFYQRGGDNPALCVVK-NDGTGFKELAKG 264 (302)
T ss_dssp SSSCCCEECSCSCE--E-EEEEETTEEEEEECSSSCEEEEEE-TTSCCCEEEEES
T ss_pred CCCCCeEEEeCCCc--c-eEEECCCEEEEEECCCCcEEEEEE-CCCCccEEeeCC
Confidence 78999988765544 4 3888999999974 4456788888 778877776643
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.97 E-value=0.085 Score=34.21 Aligned_cols=48 Identities=19% Similarity=0.296 Sum_probs=33.5
Q ss_pred CCCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEe-cC-C-CcceEEE
Q psy14260 14 VQNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIA-NF-S-RPFAIHI 62 (73)
Q Consensus 14 ~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~-~~-~-~~~~i~v 62 (73)
..+|.++++- +++||++|+....|++++.. +.....+. .. . .|.+|.+
T Consensus 225 ~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~-~~~~~~~~~~~~~~~P~gia~ 277 (430)
T 3tc9_A 225 GQNCNGAETHPINGELYFNSWNAGQVFRYDFT-TQETTPLFTIQDSGWEFHIQF 277 (430)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEEETT-TTEEEEEEECSSSSCCEEEEE
T ss_pred CCCceEEEEeCCCCEEEEEECCCCEEEEEECC-CCcEEEEEEcCCCCcceeEEE
Confidence 5789999986 58999999999999999854 33332222 22 2 5666654
No 24
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.89 E-value=0.16 Score=29.67 Aligned_cols=49 Identities=16% Similarity=0.279 Sum_probs=33.5
Q ss_pred CCCCceEEEEECC-EEEEEeCCCCeEEEEeCcCCCCeEEEec-CC-CcceEEE
Q psy14260 13 VVQNLYDITVFEN-NLFVTSWRNQSIIRVNKYNSDDYETIAN-FS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vfe~-~lywtDw~~~~i~~~~k~~g~~~~~~~~-~~-~~~~i~v 62 (73)
.+..|.+|++..+ .||++++..+.|.+.+. .|........ .. .|.+|.+
T Consensus 190 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~-~~~~~~~~~~~~~~~p~~i~~ 241 (270)
T 1rwi_B 190 DITAPWGIAVDEAGTVYVTEHNTNQVVKLLA-GSTTSTVLPFTGLNTPLAVAV 241 (270)
T ss_dssp SCCSEEEEEECTTCCEEEEETTTSCEEEECT-TCSCCEECCCCSCSCEEEEEE
T ss_pred CCCCceEEEECCCCCEEEEECCCCcEEEEcC-CCCcceeeccCCCCCceeEEE
Confidence 4478999998765 99999999999999885 3443333222 22 5666654
No 25
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.43 E-value=0.18 Score=32.82 Aligned_cols=48 Identities=10% Similarity=0.152 Sum_probs=34.5
Q ss_pred CCCCceEEEEEC----CEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEE
Q psy14260 13 VVQNLYDITVFE----NNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vfe----~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v 62 (73)
.+..|.+|++-. +.|||+|.. ..|.+++..+| ....+.... .|.+|.+
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g-~v~~~~~~~~~P~giav 189 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQ-YVDIKTTNIGQCADVNF 189 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTT-EEEEECCCCSCEEEEEE
T ss_pred ccCCCceEEEccccCCCEEEEEeCC-CCEEEEECCCC-EEEEeecCCCCccEEEE
Confidence 567899999874 899999998 88999984343 444444444 6776654
No 26
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=94.41 E-value=0.42 Score=30.60 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=28.7
Q ss_pred CCCceEEEEE-CCEEEEEeC-CCCeEEEEeCcCCCCeEEEe
Q psy14260 14 VQNLYDITVF-ENNLFVTSW-RNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 14 ~~~p~~l~vf-e~~lywtDw-~~~~i~~~~k~~g~~~~~~~ 52 (73)
+.+|.+|++- ++.||++|+ ..+.|.+++..+|. ..++.
T Consensus 322 ~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~ 361 (409)
T 3hrp_A 322 FAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVA 361 (409)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEE
T ss_pred eCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEe
Confidence 5789999987 456999999 99999999854553 34333
No 27
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.92 E-value=0.54 Score=28.75 Aligned_cols=39 Identities=13% Similarity=0.093 Sum_probs=30.9
Q ss_pred CCCceEEEEEC--CEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 14 VQNLYDITVFE--NNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 14 ~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
+.+|.+|++-. +.||++|+....|.+.+..+|+....+.
T Consensus 195 ~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 195 FSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp ESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred cCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 35699999874 6999999999999998865576655553
No 28
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.51 E-value=0.77 Score=28.31 Aligned_cols=39 Identities=8% Similarity=0.166 Sum_probs=30.8
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEec
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIAN 53 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~ 53 (73)
.++.++++.++.||.++|..+.+..+|..+++-...+..
T Consensus 66 ~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~ 104 (266)
T 2iwa_A 66 YFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTH 104 (266)
T ss_dssp CCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEEC
Confidence 345578999999999999999999999766665555543
No 29
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.42 E-value=0.27 Score=31.82 Aligned_cols=48 Identities=8% Similarity=0.041 Sum_probs=35.3
Q ss_pred CCCCceEEEEE---CCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEE
Q psy14260 13 VVQNLYDITVF---ENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vf---e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v 62 (73)
.+..|.+|++- ++.||++|.. ..|.+++ ..+.....+.... .|.+|.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~-~~I~~id-~~~~~v~~~~~~~~~P~~ia~ 186 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQ-HPTRLID-FEKEYVSTVYSGLSKVRTICW 186 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBT-EEEEEEE-TTTTEEEEEECCCSCEEEEEE
T ss_pred CCCCCCEEEECCCCCCeEEEEeCC-CcEEEEE-CCCCEEEEEecCCCCcceEEE
Confidence 46799999987 5899999988 7888888 4454555555544 6777665
No 30
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=92.70 E-value=0.81 Score=27.94 Aligned_cols=39 Identities=15% Similarity=0.115 Sum_probs=29.9
Q ss_pred CCCCceEEEEE--CCEEEEEeC-CCCeEEEEeCcCCCCeEEEe
Q psy14260 13 VVQNLYDITVF--ENNLFVTSW-RNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 13 ~~~~p~~l~vf--e~~lywtDw-~~~~i~~~~k~~g~~~~~~~ 52 (73)
.+..|.+|++- ++.||.+|. ....|.+.+ .+|.....+.
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~ 182 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWG 182 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEEC
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEec
Confidence 34579999987 689999995 788999888 5666555543
No 31
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.53 E-value=0.65 Score=29.72 Aligned_cols=30 Identities=10% Similarity=0.300 Sum_probs=24.9
Q ss_pred Cce-EEEEE--CCEEEEEeCCCCeEEEEeCcCCC
Q psy14260 16 NLY-DITVF--ENNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 16 ~p~-~l~vf--e~~lywtDw~~~~i~~~~k~~g~ 46 (73)
.|+ +|++- ++.||++|.....|.+++ ..|.
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~-~~g~ 299 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKIT-PDGE 299 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEEC-TTCC
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEe-cCCC
Confidence 478 99987 589999999999999998 4454
No 32
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.00 E-value=0.65 Score=26.97 Aligned_cols=29 Identities=10% Similarity=0.237 Sum_probs=23.7
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEe
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVN 41 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~ 41 (73)
....|.+|++- ++.||++|.....|.+.+
T Consensus 106 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 135 (270)
T 1rwi_B 106 GLNYPEGLAVDTQGAVYVADRGNNRVVKLA 135 (270)
T ss_dssp SCSSEEEEEECTTCCEEEEEGGGTEEEEEC
T ss_pred CcCCCcceEECCCCCEEEEECCCCEEEEEE
Confidence 34679999986 568999999888898885
No 33
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.23 E-value=0.3 Score=31.70 Aligned_cols=28 Identities=7% Similarity=0.192 Sum_probs=25.4
Q ss_pred CCCceEEEEE--CCEEEEEeCCCCeEEEEe
Q psy14260 14 VQNLYDITVF--ENNLFVTSWRNQSIIRVN 41 (73)
Q Consensus 14 ~~~p~~l~vf--e~~lywtDw~~~~i~~~~ 41 (73)
+.+|.+|++. ++.||.+|+.++.|.+++
T Consensus 401 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 430 (433)
T 4hw6_A 401 FNHPTSIAYDMKRKCFYIGDCDNHRVRKIA 430 (433)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred eCCCcEEEEECCCCEEEEEeCCCCEEEEEe
Confidence 5789999998 789999999999998876
No 34
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.62 E-value=0.95 Score=27.42 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=24.3
Q ss_pred CCceEEEEE-CCEEEEEeCCCCeEEEEeCc
Q psy14260 15 QNLYDITVF-ENNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 15 ~~p~~l~vf-e~~lywtDw~~~~i~~~~k~ 43 (73)
..|.++++- ++.|||+|.....|++++..
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~ 61 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPD 61 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCC
Confidence 679999974 56799999999999999843
No 35
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=90.50 E-value=1.3 Score=27.06 Aligned_cols=48 Identities=13% Similarity=0.207 Sum_probs=37.3
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEecCCCcceEEE
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIANFSRPFAIHI 62 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~~~~~i~v 62 (73)
..|.+|++.++.+|.+.+..+.|..+|..+++....+.....|.+|.+
T Consensus 44 ~~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~ 91 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHF 91 (328)
T ss_dssp SCEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEE
T ss_pred ccceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEE
Confidence 357889999999999999888999999877776666643226766665
No 36
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=89.89 E-value=2.1 Score=25.85 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=26.3
Q ss_pred CCCCceEEEEECCEEEEEeCCCCeEEEEeCc
Q psy14260 13 VVQNLYDITVFENNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 13 ~~~~p~~l~vfe~~lywtDw~~~~i~~~~k~ 43 (73)
.+..|.+|+.-+++||++|.....|.+.+..
T Consensus 167 ~~~~pngis~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 167 VFPAANGLKRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp CSCSEEEEEEETTEEEEEETTTTEEEEEEBC
T ss_pred CCCcCCCcCcCCCEEEEEeCCCCEEEEEEeC
Confidence 4567899987888999999999999998843
No 37
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=89.38 E-value=2 Score=24.97 Aligned_cols=49 Identities=20% Similarity=0.134 Sum_probs=32.3
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCCeEEEec-CC-CcceEEE
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDDYETIAN-FS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~~~~~~~-~~-~~~~i~v 62 (73)
....|.+|++- ++.||.++.....|.+.+. +|........ .. .|.+|.+
T Consensus 186 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 186 NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 45679999976 5689999998888998885 5543332222 12 4555544
No 38
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=88.76 E-value=2.7 Score=25.62 Aligned_cols=38 Identities=13% Similarity=0.253 Sum_probs=30.0
Q ss_pred Cce--EEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEec
Q psy14260 16 NLY--DITVFENNLFVTSWRNQSIIRVNKYNSDDYETIAN 53 (73)
Q Consensus 16 ~p~--~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~ 53 (73)
++| |+++.++.||-.+|..+.++..|..+.+...++..
T Consensus 64 ~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~ 103 (243)
T 3mbr_X 64 PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY 103 (243)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC
Confidence 555 57899999999999999999999766665555543
No 39
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.46 E-value=1.3 Score=29.82 Aligned_cols=30 Identities=13% Similarity=0.332 Sum_probs=26.0
Q ss_pred CCCceEEEEEC--CEEEEEeCCCCeEEEEeCc
Q psy14260 14 VQNLYDITVFE--NNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 14 ~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~ 43 (73)
..||+++++-. ++||++|+....|++++.-
T Consensus 246 ~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 246 YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 46899999865 7999999999999999854
No 40
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=88.28 E-value=1.2 Score=27.23 Aligned_cols=54 Identities=13% Similarity=0.102 Sum_probs=40.0
Q ss_pred CCceEEEE--ECCEEEEEe----CCCCeEEEEeCcCCCCeEEEecCCCcceEEEEecCCCC
Q psy14260 15 QNLYDITV--FENNLFVTS----WRNQSIIRVNKYNSDDYETIANFSRPFAIHIYHRQKQP 69 (73)
Q Consensus 15 ~~p~~l~v--fe~~lywtD----w~~~~i~~~~k~~g~~~~~~~~~~~~~~i~v~h~~~qp 69 (73)
..|.+|++ -++.||-++ +....|...+.. |+....+.....|.+|.-=|+...|
T Consensus 267 ~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P~~~~~~~~~~~~ 326 (328)
T 3dsm_A 267 TKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIPGAFCWKLEHHHH 326 (328)
T ss_dssp SCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESEEEEEEECCCCCC
T ss_pred CceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCcceEEEecccccc
Confidence 57999998 479999999 677788888854 7666665543378888776666554
No 41
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=87.68 E-value=3.5 Score=25.51 Aligned_cols=39 Identities=13% Similarity=0.250 Sum_probs=31.2
Q ss_pred CCceE--EEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEec
Q psy14260 15 QNLYD--ITVFENNLFVTSWRNQSIIRVNKYNSDDYETIAN 53 (73)
Q Consensus 15 ~~p~~--l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~ 53 (73)
..+|+ |++.++.||-.+|..+.++..|..+++....+..
T Consensus 85 ~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~ 125 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY 125 (262)
T ss_dssp TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred CccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEEC
Confidence 35665 8999999999999999999999777766655553
No 42
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.34 E-value=2.4 Score=26.54 Aligned_cols=29 Identities=21% Similarity=0.377 Sum_probs=25.3
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCc
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~ 43 (73)
..|.+++++++.+|.+++....|.+++..
T Consensus 268 ~ap~G~~~~~G~l~v~~~~~~~v~~v~~~ 296 (352)
T 2ism_A 268 FPPGNLAFFRGDLYVAGLRGQALLRLVLE 296 (352)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEEEEE
T ss_pred CCCcceEEECCEEEEEECCCCEEEEEEEC
Confidence 35789999999999999999999998743
No 43
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=87.01 E-value=3.1 Score=24.19 Aligned_cols=34 Identities=26% Similarity=0.193 Sum_probs=26.4
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCC
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDD 47 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~ 47 (73)
....|.+|++- ++.+|.++.....|.+.+. +|..
T Consensus 139 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 139 KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 34678999877 4589999998889999986 5543
No 44
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=86.87 E-value=1.8 Score=29.12 Aligned_cols=30 Identities=7% Similarity=0.152 Sum_probs=26.6
Q ss_pred CCCCceEEEEEC--CEEEEEeCCCCeEEEEeC
Q psy14260 13 VVQNLYDITVFE--NNLFVTSWRNQSIIRVNK 42 (73)
Q Consensus 13 ~~~~p~~l~vfe--~~lywtDw~~~~i~~~~k 42 (73)
.+.+|.+|++-. +.||.+|..++.|.+++.
T Consensus 442 ~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 442 RFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred hcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 467899999986 699999999999999873
No 45
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=86.80 E-value=3.2 Score=24.14 Aligned_cols=49 Identities=18% Similarity=0.233 Sum_probs=32.9
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCCeEEEec-CC-CcceEEE
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDDYETIAN-FS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~~~~~~~-~~-~~~~i~v 62 (73)
....|.+|++- ++.||.+++....|.+.+. +|........ .. .|.+|.+
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 279 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITF 279 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEE
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEe
Confidence 45679999976 4589999998889999885 5533322122 22 5666654
No 46
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=86.55 E-value=4.2 Score=25.28 Aligned_cols=38 Identities=11% Similarity=0.244 Sum_probs=30.7
Q ss_pred CceE--EEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEec
Q psy14260 16 NLYD--ITVFENNLFVTSWRNQSIIRVNKYNSDDYETIAN 53 (73)
Q Consensus 16 ~p~~--l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~~ 53 (73)
.+|+ +++.++.||-.+|..+.++.+|..+++...++..
T Consensus 95 ~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~ 134 (268)
T 3nok_A 95 NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRY 134 (268)
T ss_dssp TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEEC
T ss_pred CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeC
Confidence 4565 9999999999999999999999776666555553
No 47
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=85.02 E-value=3.3 Score=24.75 Aligned_cols=47 Identities=15% Similarity=0.209 Sum_probs=33.9
Q ss_pred CCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEE
Q psy14260 15 QNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIH 61 (73)
Q Consensus 15 ~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~ 61 (73)
..|.+|++- ++.||.++|....|.+.+..+|+....+.... .|..+.
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 578999985 57899999998899999876677665555432 444433
No 48
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.99 E-value=4.4 Score=24.19 Aligned_cols=39 Identities=10% Similarity=0.097 Sum_probs=29.7
Q ss_pred EEEEcCCCCCceEEEEEC--CEEEEEeCCCCeEEEEeCcCC
Q psy14260 7 KVLVKPVVQNLYDITVFE--NNLFVTSWRNQSIIRVNKYNS 45 (73)
Q Consensus 7 ~~v~~~~~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~~g 45 (73)
+.++......+-+.+... +.|||+|.....|++.+..++
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~ 45 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK 45 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCC
Confidence 344555567788888664 799999999999999985544
No 49
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=84.61 E-value=4.7 Score=24.14 Aligned_cols=42 Identities=7% Similarity=0.033 Sum_probs=30.2
Q ss_pred CCCeEEEEcCCCCCceEEEEEC--CEEEEEeCCCCeEEEEeCcCCC
Q psy14260 3 QMKNKVLVKPVVQNLYDITVFE--NNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 3 G~~r~~v~~~~~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~~g~ 46 (73)
|...+.+.. ....+-+++... ++|||+|.....|++.+. +|+
T Consensus 34 ~~~~~~l~~-~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~ 77 (305)
T 3dr2_A 34 DARLLTLYD-QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT 77 (305)
T ss_dssp TCCCEEEEC-CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC
T ss_pred CCceEEEec-CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC
Confidence 334454444 467888888764 579999999999999885 554
No 50
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=84.09 E-value=4.5 Score=23.47 Aligned_cols=33 Identities=15% Similarity=0.152 Sum_probs=26.3
Q ss_pred CCCCceEEEEEC-CEEEEEeCCCCeEEEEeCcCCC
Q psy14260 13 VVQNLYDITVFE-NNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 13 ~~~~p~~l~vfe-~~lywtDw~~~~i~~~~k~~g~ 46 (73)
....|.+|++-. +.||++++....|.+++. +|.
T Consensus 181 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 181 PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 456789998763 679999998889999986 655
No 51
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=84.05 E-value=4.8 Score=23.77 Aligned_cols=42 Identities=5% Similarity=-0.069 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCCCCceEEEEEC--CEEEEEeCCCCeEEEEeCcCC
Q psy14260 3 QMKNKVLVKPVVQNLYDITVFE--NNLFVTSWRNQSIIRVNKYNS 45 (73)
Q Consensus 3 G~~r~~v~~~~~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~~g 45 (73)
|...+++. .....|-+++.-. +.|||++...+.|.+.+..++
T Consensus 17 ~~~~~~l~-~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~ 60 (296)
T 3e5z_A 17 GAEARRLA-DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ 60 (296)
T ss_dssp TCCCEEEE-CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC
T ss_pred CCcEEEEe-cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC
Confidence 33445444 4467889988763 469999999999999885544
No 52
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=83.03 E-value=5.1 Score=23.39 Aligned_cols=49 Identities=14% Similarity=0.204 Sum_probs=32.5
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCCeEEEec--CC-CcceEEE
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDDYETIAN--FS-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~~~~~~~--~~-~~~~i~v 62 (73)
...+|.+|++- ++.+|.++.....|.+.+ ..|+....+.. .. .|.+|.+
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~-~~g~~~~~~~~~~~~~~p~~i~~ 171 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFD-QNGNVLHKFGCSKHLEFPNGVVV 171 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEEC-TTSCEEEEEECTTTCSSEEEEEE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEc-CCCCEEEEeCCCCccCCcEEEEE
Confidence 34679999975 457999999888899887 44554444432 12 4555544
No 53
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=82.37 E-value=6.5 Score=24.12 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=32.0
Q ss_pred CCCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 14 VQNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 14 ~~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
+..|+.|+..++.||-..|.+..|.++|-.+|+-...+.
T Consensus 151 ~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~ 189 (266)
T 2iwa_A 151 VIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWIL 189 (266)
T ss_dssp CCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEE
T ss_pred cccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEE
Confidence 346788887799999999999999999988887666654
No 54
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=82.17 E-value=3.4 Score=25.37 Aligned_cols=39 Identities=8% Similarity=0.064 Sum_probs=28.8
Q ss_pred CCCCceEEEEEC-CEEEEEeCC-----CCeEEEEeCcCCCCeEEE
Q psy14260 13 VVQNLYDITVFE-NNLFVTSWR-----NQSIIRVNKYNSDDYETI 51 (73)
Q Consensus 13 ~~~~p~~l~vfe-~~lywtDw~-----~~~i~~~~k~~g~~~~~~ 51 (73)
.+.+|+++++-. +.|||+|.. ...|.+.+..+|+-...+
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~ 109 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVI 109 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEE
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEE
Confidence 357899999864 789999976 468888886566534443
No 55
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=81.26 E-value=6.1 Score=23.05 Aligned_cols=49 Identities=14% Similarity=0.244 Sum_probs=33.1
Q ss_pred CCCCceEEEEEC-CEEEEEeCCCCeEEEEeCcCCCCeEEEecC--C-CcceEEE
Q psy14260 13 VVQNLYDITVFE-NNLFVTSWRNQSIIRVNKYNSDDYETIANF--S-RPFAIHI 62 (73)
Q Consensus 13 ~~~~p~~l~vfe-~~lywtDw~~~~i~~~~k~~g~~~~~~~~~--~-~~~~i~v 62 (73)
....|.+|++-. +.+|.+|.....|...+. .|+....+... . .|.+|.+
T Consensus 162 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~ 214 (286)
T 1q7f_A 162 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGI 214 (286)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEE
T ss_pred ccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEE
Confidence 456799999764 689999998889988884 55544444322 2 4555544
No 56
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=80.94 E-value=7 Score=23.55 Aligned_cols=30 Identities=10% Similarity=0.048 Sum_probs=24.4
Q ss_pred CCCceEEEEEC--CEEEEEeCCCCeEEEEeCc
Q psy14260 14 VQNLYDITVFE--NNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 14 ~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~ 43 (73)
+..|.+|++-. +.||++|.....|.+.+..
T Consensus 184 ~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 184 LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred CccCcceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 56899999874 4799999988899988743
No 57
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=71.66 E-value=15 Score=22.74 Aligned_cols=38 Identities=5% Similarity=0.300 Sum_probs=30.3
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
.++..|..-++.||-..|.+..|.++|-.+|+-...+-
T Consensus 181 ~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 181 ELINELECANGVIYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp CCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred ccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 34556777799999999999999999988887555554
No 58
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=70.02 E-value=18 Score=22.98 Aligned_cols=38 Identities=18% Similarity=0.303 Sum_probs=28.9
Q ss_pred EEcCCCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCC
Q psy14260 9 LVKPVVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 9 v~~~~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~ 46 (73)
++.+.+.+|.+|++. ++.||.++...+.|.+++.-+|.
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 344568999999976 46899999878899998743443
No 59
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=69.40 E-value=17 Score=22.38 Aligned_cols=38 Identities=16% Similarity=0.434 Sum_probs=30.5
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
.++..|+.-++.||-..|.+..|.++|-.+|+-...+-
T Consensus 172 ~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 172 PELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp CCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred cccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEE
Confidence 34445777799999999999999999988887666654
No 60
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=68.22 E-value=17 Score=21.98 Aligned_cols=38 Identities=8% Similarity=-0.102 Sum_probs=27.8
Q ss_pred EEEcCCCCCceEEEEEC--CEEEEEeCCCCeEEEEeCcCC
Q psy14260 8 VLVKPVVQNLYDITVFE--NNLFVTSWRNQSIIRVNKYNS 45 (73)
Q Consensus 8 ~v~~~~~~~p~~l~vfe--~~lywtDw~~~~i~~~~k~~g 45 (73)
.+.......+-+++... +.+||+|.....|++.+..+|
T Consensus 42 ~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~ 81 (326)
T 2ghs_A 42 VLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASG 81 (326)
T ss_dssp EEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTT
T ss_pred EeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 44443455677888765 699999998889999885544
No 61
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=67.33 E-value=20 Score=22.32 Aligned_cols=31 Identities=6% Similarity=0.112 Sum_probs=24.5
Q ss_pred EcCCCCCceEEEEEC-CEEEEEeCCCCeEEEEe
Q psy14260 10 VKPVVQNLYDITVFE-NNLFVTSWRNQSIIRVN 41 (73)
Q Consensus 10 ~~~~~~~p~~l~vfe-~~lywtDw~~~~i~~~~ 41 (73)
+...+.+|.+|++-. +.||.+|.. ..|.+++
T Consensus 26 va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~i~ 57 (352)
T 2ism_A 26 VVGGLEVPWALAFLPDGGMLIAERP-GRIRLFR 57 (352)
T ss_dssp EECCCSCEEEEEECTTSCEEEEETT-TEEEEEE
T ss_pred EECCCCCceEEEEcCCCeEEEEeCC-CeEEEEE
Confidence 344588999999754 579999976 7898887
No 62
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=67.11 E-value=21 Score=22.46 Aligned_cols=49 Identities=12% Similarity=0.227 Sum_probs=34.7
Q ss_pred CceEEEEEC--C-EEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEe
Q psy14260 16 NLYDITVFE--N-NLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYH 64 (73)
Q Consensus 16 ~p~~l~vfe--~-~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h 64 (73)
.|.+|++-. . .+|-+.|..+.|.-+|-.+++-...+.... .|.+|.++.
T Consensus 319 ~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~~vG~~P~~~~~~~ 371 (373)
T 2mad_H 319 DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSVMN 371 (373)
T ss_pred CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeecCCCCCCcEEEEcc
Confidence 588888764 4 677777778899989977776666544333 788887654
No 63
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=66.11 E-value=23 Score=22.56 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=33.5
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCC---CeEEEecC-C-CcceEEE
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSD---DYETIANF-S-RPFAIHI 62 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~---~~~~~~~~-~-~~~~i~v 62 (73)
.-|.+|+++++.+|-.++....|.++....++ ..+.++.. . +|.+|.+
T Consensus 263 ~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~ 315 (347)
T 3das_A 263 ASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAP 315 (347)
T ss_dssp CCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEE
T ss_pred CCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEE
Confidence 35889999999999999999999998743321 23444433 2 5666554
No 64
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=65.40 E-value=22 Score=22.21 Aligned_cols=35 Identities=11% Similarity=0.189 Sum_probs=27.1
Q ss_pred EcCCCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCC
Q psy14260 10 VKPVVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 10 ~~~~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~ 46 (73)
+...+.+|.+|++. ++.||.++.. ..|.+++ -+|.
T Consensus 24 va~~l~~P~~ia~~pdG~l~V~e~~-g~I~~~d-~~G~ 59 (354)
T 3a9g_A 24 VASDLEVPWSIAPLGGGRYLVTERP-GRLVLIS-PSGK 59 (354)
T ss_dssp EECSCSCEEEEEEEETTEEEEEETT-TEEEEEC-SSCE
T ss_pred EeCCCCCCeEEEEcCCCeEEEEeCC-CEEEEEe-CCCc
Confidence 34468899999966 5689999987 7898886 4554
No 65
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.75 E-value=20 Score=21.48 Aligned_cols=29 Identities=10% Similarity=0.079 Sum_probs=24.8
Q ss_pred CCCceEEEEECCEEEEEeCCCCeEEEEeC
Q psy14260 14 VQNLYDITVFENNLFVTSWRNQSIIRVNK 42 (73)
Q Consensus 14 ~~~p~~l~vfe~~lywtDw~~~~i~~~~k 42 (73)
...|.+++..++.||.++.....|.+++.
T Consensus 283 ~~~~~~~~~~~g~L~v~~~~~~~i~~~~~ 311 (322)
T 2fp8_A 283 GEHFEQIQEHDGLLYIGTLFHGSVGILVY 311 (322)
T ss_dssp TSCCCEEEEETTEEEEECSSCSEEEEEEC
T ss_pred cccceEEEEeCCEEEEeecCCCceEEEec
Confidence 46788888889999999999999998873
No 66
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=63.54 E-value=22 Score=21.56 Aligned_cols=38 Identities=18% Similarity=0.343 Sum_probs=30.5
Q ss_pred CCceEEEEECCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 15 QNLYDITVFENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 15 ~~p~~l~vfe~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
.++..|..-++.||-..|.+..|.++|-.+|+-...+-
T Consensus 150 ~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 150 DNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp CCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred ccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 34556777799999999999999999988887666555
No 67
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=62.60 E-value=29 Score=22.62 Aligned_cols=41 Identities=20% Similarity=0.291 Sum_probs=29.5
Q ss_pred CeEEEEcCCCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCC
Q psy14260 5 KNKVLVKPVVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 5 ~r~~v~~~~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~ 46 (73)
..+++. ..+.+|.+|++. ++.||.++.....|.+++..+|.
T Consensus 18 ~~~~~a-~~l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 18 DKKVIL-SNLNKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp CEEEEE-CCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred EEEEEE-CCCCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 344444 458999999975 45899999877679988744454
No 68
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=61.61 E-value=12 Score=23.83 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=35.6
Q ss_pred eEEEEcCCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCcC-CC--CeEEEecCC-CcceEEEE
Q psy14260 6 NKVLVKPVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKYN-SD--DYETIANFS-RPFAIHIY 63 (73)
Q Consensus 6 r~~v~~~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~-g~--~~~~~~~~~-~~~~i~v~ 63 (73)
.+++.. .+..|.||++- +.+||.+|.....|++.+... |. +.+++ ... .|.++++-
T Consensus 213 ~~~~~~-~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD 274 (355)
T 3sre_A 213 VRVVAE-GFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVD 274 (355)
T ss_dssp CEEEEE-EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEEC
T ss_pred EEEeec-CCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEe
Confidence 344443 47789999975 568999999999999877432 32 22233 222 56666654
No 69
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=57.04 E-value=25 Score=21.41 Aligned_cols=33 Identities=18% Similarity=0.243 Sum_probs=24.9
Q ss_pred CCceEEEEE--CCEEEEEeC---CCCeEEEEeCcCCCC
Q psy14260 15 QNLYDITVF--ENNLFVTSW---RNQSIIRVNKYNSDD 47 (73)
Q Consensus 15 ~~p~~l~vf--e~~lywtDw---~~~~i~~~~k~~g~~ 47 (73)
.+|.++++- ++++|.+|. ....|...+..+|+.
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~ 157 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLA 157 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCE
Confidence 367888887 479999998 677888887555543
No 70
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=51.28 E-value=34 Score=19.88 Aligned_cols=48 Identities=19% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEE
Q psy14260 15 QNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHI 62 (73)
Q Consensus 15 ~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v 62 (73)
..|.+|++- ++.||.+++....|.+.+..+|+....+.... .|.++.+
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~ 275 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHF 275 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEE
Confidence 458888875 46789899888899998865565544443332 4555443
No 71
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=50.68 E-value=43 Score=20.88 Aligned_cols=29 Identities=14% Similarity=0.085 Sum_probs=24.6
Q ss_pred CCceEEEE--------ECCEEEEEeCCCCeEEEEeCc
Q psy14260 15 QNLYDITV--------FENNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 15 ~~p~~l~v--------fe~~lywtDw~~~~i~~~~k~ 43 (73)
..|.++++ +++.+|.+++....|.+++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
Confidence 35889998 678999999999999998843
No 72
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=46.47 E-value=43 Score=19.67 Aligned_cols=38 Identities=11% Similarity=0.112 Sum_probs=26.4
Q ss_pred CCceEEEEE--CCEEEEEeCCCCeEEEEeCcCCCCeEEEe
Q psy14260 15 QNLYDITVF--ENNLFVTSWRNQSIIRVNKYNSDDYETIA 52 (73)
Q Consensus 15 ~~p~~l~vf--e~~lywtDw~~~~i~~~~k~~g~~~~~~~ 52 (73)
..|.++++- ++++|.++.....|...+..+++....+.
T Consensus 272 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 272 PESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp SSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 445566653 56899999988899988866665444443
No 73
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=44.07 E-value=63 Score=20.87 Aligned_cols=47 Identities=9% Similarity=0.178 Sum_probs=34.2
Q ss_pred CceEEEEECC---EEEEEeCCCCeEEEEeCcCCCCeEEEecCCCcceEEE
Q psy14260 16 NLYDITVFEN---NLFVTSWRNQSIIRVNKYNSDDYETIANFSRPFAIHI 62 (73)
Q Consensus 16 ~p~~l~vfe~---~lywtDw~~~~i~~~~k~~g~~~~~~~~~~~~~~i~v 62 (73)
.|++|++-.| .||-+.|..+.|.-+|-.+++-...+....+|+.+.+
T Consensus 332 ~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~ 381 (386)
T 3sjl_D 332 EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVIT 381 (386)
T ss_dssp EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEE
T ss_pred CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEE
Confidence 4678887332 6788899999999899777766666555457877765
No 74
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=42.56 E-value=58 Score=20.03 Aligned_cols=44 Identities=9% Similarity=0.078 Sum_probs=30.7
Q ss_pred ceEEEEE--CCEEEEEeCCCCeEEEEeCcCC--CCeEEEecCC-CcceEEE
Q psy14260 17 LYDITVF--ENNLFVTSWRNQSIIRVNKYNS--DDYETIANFS-RPFAIHI 62 (73)
Q Consensus 17 p~~l~vf--e~~lywtDw~~~~i~~~~k~~g--~~~~~~~~~~-~~~~i~v 62 (73)
|.+|++- +.+||=+.+ +.|...|..+| +....+.... .|.+|.+
T Consensus 307 p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~ 355 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGAAEASLQVQF 355 (361)
T ss_dssp CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTSCSSEEEEEE
T ss_pred eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccCCCCcEEEEe
Confidence 8888864 678998876 67777787776 5555553333 7888755
No 75
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=40.83 E-value=57 Score=20.70 Aligned_cols=47 Identities=6% Similarity=-0.012 Sum_probs=33.3
Q ss_pred CceEEEEEC--CEEEEEeC-CCCeEEEEeCcCCCCeEEEecCCCcceEEE
Q psy14260 16 NLYDITVFE--NNLFVTSW-RNQSIIRVNKYNSDDYETIANFSRPFAIHI 62 (73)
Q Consensus 16 ~p~~l~vfe--~~lywtDw-~~~~i~~~~k~~g~~~~~~~~~~~~~~i~v 62 (73)
.|.+|++-. .++|.+.+ ..+.|..+|-.+++-...+.-...|.+|.+
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~ 364 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSV 364 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEEC
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEe
Confidence 588888753 47999988 688999999766655544443337877754
No 76
>2in5_A Hypothetical lipoprotein YMCC; mostly beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Escherichia coli K12} SCOP: b.177.1.1
Probab=38.10 E-value=20 Score=21.32 Aligned_cols=39 Identities=10% Similarity=0.075 Sum_probs=22.7
Q ss_pred EEEEEeCCCCeEEEEeCcCCCCeEEEecCC-CcceEEEEe
Q psy14260 26 NLFVTSWRNQSIIRVNKYNSDDYETIANFS-RPFAIHIYH 64 (73)
Q Consensus 26 ~lywtDw~~~~i~~~~k~~g~~~~~~~~~~-~~~~i~v~h 64 (73)
.-||.|..++.|.+....-|-+...+.-.. .|+.+...|
T Consensus 165 N~YWvd~~sG~VvqSrQ~lgP~~~~i~~~~Lkp~~~~~~~ 204 (207)
T 2in5_A 165 NTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAPLEHHH 204 (207)
T ss_dssp EEEEEETTTCCEEEEEEESSSSCSEEEEEECSCCCC----
T ss_pred EEEEEECCCCcEEEEEEecCCCCceEEEEEecchhhcccc
Confidence 459999888888887777666554333222 555554433
No 77
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=36.38 E-value=59 Score=20.16 Aligned_cols=30 Identities=10% Similarity=0.411 Sum_probs=24.6
Q ss_pred CceEEEEE--------CCEEEEEeCCCCeEEEEeCcCC
Q psy14260 16 NLYDITVF--------ENNLFVTSWRNQSIIRVNKYNS 45 (73)
Q Consensus 16 ~p~~l~vf--------e~~lywtDw~~~~i~~~~k~~g 45 (73)
.|.+++++ ++.+|.+|+....|.+++...|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~ 309 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD 309 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC
Confidence 57889986 5899999999999999884433
No 78
>1bzk_A Protein (BAND 3 anion transport protein); human erythrocyte anion transporter, transmembrane, synthetic peptide; NMR {Synthetic} SCOP: j.35.1.1
Probab=36.16 E-value=1.3 Score=20.05 Aligned_cols=8 Identities=0% Similarity=0.372 Sum_probs=5.6
Q ss_pred EEEeCCCC
Q psy14260 28 FVTSWRNQ 35 (73)
Q Consensus 28 ywtDw~~~ 35 (73)
||+||.+.
T Consensus 6 Y~SD~~dg 13 (43)
T 1bzk_A 6 YLSDITDA 13 (43)
T ss_dssp THHHHTTS
T ss_pred cHHHHHHH
Confidence 77788753
No 79
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=33.99 E-value=73 Score=18.71 Aligned_cols=34 Identities=15% Similarity=0.186 Sum_probs=24.5
Q ss_pred CCCCceEEEEE-CCEEEEEeCCCCeEEEEeCcCCC
Q psy14260 13 VVQNLYDITVF-ENNLFVTSWRNQSIIRVNKYNSD 46 (73)
Q Consensus 13 ~~~~p~~l~vf-e~~lywtDw~~~~i~~~~k~~g~ 46 (73)
....|.++++- ++.|||++.....|.+.+..+|.
T Consensus 43 ~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~ 77 (333)
T 2dg1_A 43 KGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE 77 (333)
T ss_dssp SCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred cCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc
Confidence 34567777764 46799999888889988855444
No 80
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=28.97 E-value=88 Score=18.10 Aligned_cols=31 Identities=13% Similarity=0.001 Sum_probs=23.0
Q ss_pred CCCCCceEEEEE--CCEEEEEeCCCCeEEEEeCc
Q psy14260 12 PVVQNLYDITVF--ENNLFVTSWRNQSIIRVNKY 43 (73)
Q Consensus 12 ~~~~~p~~l~vf--e~~lywtDw~~~~i~~~~k~ 43 (73)
.....|.++++- ++.+ |++.....|++.+..
T Consensus 169 ~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLN 201 (296)
T ss_dssp CCCSSEEEEEECTTSCEE-EEETTTTEEEEEEEC
T ss_pred cCCCCCccEEECCCCCEE-EEeCCCCeEEEEEEC
Confidence 346778999875 3455 999988889887743
No 81
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=26.91 E-value=1.3e+02 Score=19.43 Aligned_cols=28 Identities=11% Similarity=0.332 Sum_probs=23.4
Q ss_pred CCEEEEEeCCCCeEEEEeCcCCCCeEEE
Q psy14260 24 ENNLFVTSWRNQSIIRVNKYNSDDYETI 51 (73)
Q Consensus 24 e~~lywtDw~~~~i~~~~k~~g~~~~~~ 51 (73)
+.++|-+|-....|..++..+|+..++.
T Consensus 170 ~~~aYItD~~~~gLIVydl~~~~swRv~ 197 (381)
T 3q6k_A 170 ETFVYITNFLRGALFIYDHKKQDSWNVT 197 (381)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccEEEEEcCCCCcEEEEECCCCcEEEEc
Confidence 5789999988889999998888777655
No 82
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=22.77 E-value=75 Score=15.53 Aligned_cols=19 Identities=11% Similarity=0.128 Sum_probs=13.7
Q ss_pred CceEEEEECCEEEEEeCCC
Q psy14260 16 NLYDITVFENNLFVTSWRN 34 (73)
Q Consensus 16 ~p~~l~vfe~~lywtDw~~ 34 (73)
.-+-+-.+++..+|..|+.
T Consensus 42 gtC~V~F~D~s~~w~~~kd 60 (66)
T 2eqj_A 42 QSCFIIFEDSSKSWVLWKD 60 (66)
T ss_dssp TEEEEEETTTEEEEEETTT
T ss_pred cEEEEEEccCCEEEEEeec
Confidence 4445556678889999976
Done!