BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14262
(482 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328702065|ref|XP_001946912.2| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Acyrthosiphon pisum]
Length = 2150
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 115/282 (40%), Positives = 144/282 (51%), Gaps = 49/282 (17%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPH 261
+ C QF CG G+CIP WKCD DC DGSDE ++C + C Q QCALSKKCIP
Sbjct: 33 SSCNSNQFFCGSGECIPLKWKCDFNPDC-ADGSDEFDSCGLPTCKYSQFQCALSKKCIPR 91
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W+CD E+DC L E D S +D
Sbjct: 92 EWICDGELDCGAS----------------------------------LNSTEQDASDEDS 117
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ C PN RCG+S QC + FCDG C N DEG FC N
Sbjct: 118 LQ----------CQKPSSCPPNMARCGNSTQCKYIESFCDGTSHCENSTDEGRFCENMVP 167
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSC 440
C L C+H C PT +G CFCP G P+ +C+D DEC +++ +CDQ CTN S+ CSC
Sbjct: 168 CHGLNCAHGCKPTGKGPACFCPEGMQPHNNECIDMDECEVLNYTCDQICTNKKGSFSCSC 227
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY +C A+NVP++E ASI+ S++ DIRRI+LNGS
Sbjct: 228 VPGYI--QTNSTCKAINVPENEDASILVSTSKDIRRIYLNGS 267
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 116/381 (30%), Positives = 160/381 (41%), Gaps = 82/381 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C C SN+C++ CDG DC + DE P C QFSC + K CIP SW
Sbjct: 935 CPQENFACSDSNKCISKFWVCDGDNDCDDKSDESPGLCESCLASQFSCSVTKRCIPHSWV 994
Query: 224 CDGFVDCLE-DGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC E D SDE C C + C + CI + ++C+ E +C D +D
Sbjct: 995 CDGTFDCGEGDTSDEHQYCETRTCQELEFTCT-NGHCISYEYVCNAEDNCG-----DGSD 1048
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD--------------------CSTDDI 321
E K C G+ C + CIP CD +D CS D+
Sbjct: 1049 EV--KCSDCV-GEFLCTKNNTCIPLKKKCDGVIDCDGATDEFNCSSGLNHTNYTCSNDEF 1105
Query: 322 V--DNTDEDWDKYF-----------------------------SH-----NAVLCHPNEL 345
+ + T DK++ SH +++ C +
Sbjct: 1106 LCLNTTGFCIDKHYVCDGLPDCPNGSDENNCTTIKNCTLENCHSHEIDNSSSIFCAYPNI 1165
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGAMCFCPA 404
C C+++ C+GK DC +G DEG C + +CE + CSH C +P G +C CP
Sbjct: 1166 TCDHKRTCISVDMLCNGKNDCLDGSDEGGQCASN-ECELSSDCSHICQNSPDGYICLCPP 1224
Query: 405 G---QNPNKTQCVDADECLIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAV--NV 458
QN N T C C G C Q C H + C+C EGY L D +C ++ N+
Sbjct: 1225 NMILQNDN-TTCSVVSPCSTWGRCSQKCMKLGHYGHKCTCNEGYLLATDHFTCKSIDTNI 1283
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
PQ IIFS+ ++R I L
Sbjct: 1284 PQ-----IIFSNKHELRGIDL 1299
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 136/355 (38%), Gaps = 67/355 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCG-MGKCI 218
C +E +C + QC++ CDG DC +G DE GP C F+C KCI
Sbjct: 890 CGDDEFQCIKNKQCISKKYVCDGDNDCGDGSDEDTSEYGPCGKHTCPQENFACSDSNKCI 949
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ W CDG DC +D SDE C Q C+++K+CIPH+W+CD DC D D
Sbjct: 950 SKFWVCDGDNDC-DDKSDESPGLCESCLASQFSCSVTKRCIPHSWVCDGTFDCGEGDTSD 1008
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-------------------- 318
+ + + C + C + CI + ++C+ E +C
Sbjct: 1009 --EHQYCETRTCQELEFTCT-NGHCISYEYVCNAEDNCGDGSDEVKCSDCVGEFLCTKNN 1065
Query: 319 ---------DDIVD---NTDE-DWDKYFSHNAVLCHPNELRC-GSSNQCVALSKFCDGKP 364
D ++D TDE + +H C +E C ++ C+ CDG P
Sbjct: 1066 TCIPLKKKCDGVIDCDGATDEFNCSSGLNHTNYTCSNDEFLCLNTTGFCIDKHYVCDGLP 1125
Query: 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD------- 417
DC NG DE C +C C C P +K C+ D
Sbjct: 1126 DCPNGSDENN-CTTIKNCTLENCHSHEIDNSSSIFCAYPNITCDHKRTCISVDMLCNGKN 1184
Query: 418 ---------------ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
EC + C C N+ Y+C C L+ D +C+ V+
Sbjct: 1185 DCLDGSDEGGQCASNECELSSDCSHICQNSPDGYICLCPPNMILQNDNTTCSVVS 1239
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 134/324 (41%), Gaps = 63/324 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+E+A M G N++ V ++QWP SL +D+ LYW D + + +E + +DGS+ ++
Sbjct: 717 IERAWMDGNNQTTFVNVDVQWPMSLTLDFFTRKLYWSDVYKDRIECIDLDGSNREIIKRS 776
Query: 168 NELRCG-------------SSNQCVALSKFCDGKPDCSNGEDEGPFCN-------AECTP 207
G ++ + + S K + G + P A+
Sbjct: 777 TPYPYGIAIYNNLLFWTETATTEVLIKSYNLINKSQETLGIENPPLYTLKVYNSEAQVKA 836
Query: 208 GQFSC-------GMGKCIPESWKC---DGFVDCLEDGSDEPNTCI--------HQCFNGQ 249
+ C G+ P C DG+V L D+ CI + C + +
Sbjct: 837 SPYWCEKLDLCPGLCMSTPNGPVCMCNDGYV--LRTTDDKKKECIKSSNYSTPNACGDDE 894
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCI 304
QC +K+CI ++CD + DC D +DED ++ H C C+ S KCI
Sbjct: 895 FQCIKNKQCISKKYVCDGDNDCG-----DGSDEDTSEYGPCGKHTCPQENFACSDSNKCI 949
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
W+CD + DC D +DE S C ++ C + +C+ S CDG
Sbjct: 950 SKFWVCDGDNDCD-----DKSDESPGLCES-----CLASQFSCSVTKRCIPHSWVCDGTF 999
Query: 365 DCSNGE--DEGPFCNNKADCENLK 386
DC G+ DE +C + C+ L+
Sbjct: 1000 DCGEGDTSDEHQYCETRT-CQELE 1022
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMG-KCIPESW 222
C+ N+ CGS +C+ L CD PDC++G DE C C QF C + KCIP W
Sbjct: 35 CNSNQFFCGSG-ECIPLKWKCDFNPDCADGSDEFDSCGLPTCKYSQFQCALSKKCIPREW 93
Query: 223 KCDGFVDC-------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG +DC +D SDE + +QC C P+ C C
Sbjct: 94 ICDGELDCGASLNSTEQDASDEDS----------LQCQKPSSCPPNMARCGNSTQC 139
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 30/119 (25%)
Query: 55 THTLALEFNHRNQSLCFIQQQN-VSSVRLRCAQINDLLNS--WDLPAPEIFPLDERLEKA 111
L+L F+HRN ++CF+ Q N + +L CA I++L S WDLP P FPL A
Sbjct: 276 VQALSLTFDHRNHTVCFVHQYNKTNGAKLSCANIDNLSVSDIWDLPPPTFFPLLATTHVA 335
Query: 112 GMHGENRSPLVTKNIQWPSS--LVIDYNQDILYWC-----------DSHLNTVESVRVD 157
+ W S +D ++D++Y C D +LN S+ +D
Sbjct: 336 --------------LDWVSRNWYYVDDDRDMIYMCTYNMKYCQILIDVNLNKPRSIALD 380
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+A + G +R PL+ I +P L +D + +YW D++L+ VE + DGS+ +
Sbjct: 398 VERAQLSGLDRVPLIDHKIVYPYGLTVDIPSEHIYWVDTYLDFVERINYDGSNRRTI 454
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 11/81 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI----QWPSSLVIDYNQDILYWCDSHLN 149
WD AP R+E+ M GE R +V ++ +WP+ L +DY + +YW D+ +
Sbjct: 1423 WDSSAP-------RIERCSMAGEFRQTIVLVSMFSDGEWPNGLTLDYELNRIYWIDAKSD 1475
Query: 150 TVESVRVDGSHNAVLCHPNEL 170
T+ +V +G+++ ++ +EL
Sbjct: 1476 TIHTVDYNGNNHHLVLKGHEL 1496
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 22/37 (59%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
C PN RCG+S QC + FCDG C N DEG FC
Sbjct: 126 CPPNMARCGNSTQCKYIESFCDGTSHCENSTDEGRFC 162
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
C Q QCALSKKCIP W+CD E+DC +++T++D
Sbjct: 75 CKYSQFQCALSKKCIPREWICDGELDCGAS--LNSTEQD 111
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
C Q C+++K+CIPH+W+CD DC D D
Sbjct: 975 CLASQFSCSVTKRCIPHSWVCDGTFDCGEGDTSD 1008
>gi|270010181|gb|EFA06629.1| hypothetical protein TcasGA2_TC009548 [Tribolium castaneum]
Length = 4576
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/240 (42%), Positives = 136/240 (56%), Gaps = 11/240 (4%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKK 302
C + Q QC L CIP +W CD + DC+ D +DE ++ + C Q QCAL++K
Sbjct: 32 CDSDQFQC-LDGPCIPSHWRCDGQPDCA-----DGSDEPFECIQTQTCRPEQFQCALTRK 85
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P W+CDE+ DC T + D D H + C N+ +CG +C + KFCD
Sbjct: 86 CLPLGWVCDEDQDCGTSTTLGVDTSDEDPSQCHKEIKCPWNQAKCGFGPECAPIKKFCDK 145
Query: 363 KPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI 421
+ DC NG DE FC N C+ L CS+ C PT G CFCP GQ P ++CVDADEC +
Sbjct: 146 QRDCVNGGDEWDFCRNSTFSCDKLVCSYGCRPTGEGPKCFCPEGQRPEGSRCVDADECEL 205
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
D +C Q C NT S+ CSC GY +G C A+NVP ASI+FS+ +I R+ L+G
Sbjct: 206 DNTCAQVCKNTVGSFECSCVSGY--EKNGTDCVALNVPPALDASIVFSTQAEIARLKLSG 263
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/378 (31%), Positives = 171/378 (45%), Gaps = 76/378 (20%)
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
E+ RV H C ++ CG S +C+ LS C+G PDC + DE C+ +C QF
Sbjct: 2700 ENCRVMEGH----CQNDQFMCGDS-RCIPLSWHCNGNPDCLDNSDEYD-CHHQCRSDQFK 2753
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C +CIP SW+CDG DC+ D SDE C + +C NG +C + +CI WLCD E D
Sbjct: 2754 CDNSECIPLSWQCDGHPDCM-DQSDESKHCELRECENGDFRCNSTGRCISRLWLCDGEAD 2812
Query: 271 CSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C +D DE D+ C + QC ++ CI + CD + DC+ D +DE
Sbjct: 2813 C-----LDGADEHKDQGCGVCTSEHFQC-VNGVCINKMYYCDGDKDCN-----DGSDEPP 2861
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD-------- 381
+ + + C +E C ++ +C+ CDG DC +G DEG C+N+ D
Sbjct: 2862 ECHKT-----CTSDEFAC-NNGKCIMDLLKCDGNDDCGDGSDEGKDCHNEGDYCKGKGWF 2915
Query: 382 -----------------------------------CENLKCSHKCSPTPRGAMCFCPAGQ 406
+ CS KC P G C C G
Sbjct: 2916 HCGNGVCINDTLLCNGENNCGDFSDETKCRINECTAQPPPCSQKCVDKPIGYECQCHTGY 2975
Query: 407 N---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+K C D +ECL C Q C NT S+ CSC GY L PDG++C + ++ P
Sbjct: 2976 QTSAKDKHLCEDINECLAR-PCSQLCRNTRGSFHCSCAPGYILHPDGRTCGSNSIV---P 3031
Query: 464 ASIIFSSTVDIRRIHLNG 481
++I ++ IR I + G
Sbjct: 3032 VTLILANRYYIREIDMTG 3049
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 171/374 (45%), Gaps = 56/374 (14%)
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQF 210
E++ DG V+C N+++C + C++ CDG+ DC +G DE C+ C+ QF
Sbjct: 906 EALGPDGPCKDVICPANQIKC-DNQTCISKYWACDGEQDCVDGSDEDEKRCSEVCSAAQF 964
Query: 211 SCGMGK-CIPESWKCDGFVDC-LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
C + K CIP WKCD DC ED SDE + QC + CA + +CI CD
Sbjct: 965 KCAVSKRCIPSVWKCDNVADCGPEDMSDEADCVKKQCEVNEFTCA-NGRCISQVLYCDGV 1023
Query: 269 MDC--STDDI------------------VDNTDE---------DWDKFH-----QCFNGQ 294
DC S+D+I + N+ + +D++ C +
Sbjct: 1024 DDCKDSSDEINCTECQVTEFFCPSTATCLPNSKKCDGQIDCNGGYDEYECNENLNCGKTE 1083
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAV------LCHPNELRC 347
+CA + +CIP +++CD ++DC +D +DE +K HN CH C
Sbjct: 1084 FKCANNLECIPESYVCDGDLDC-----LDASDEKHCNKTAHHNTTSPATSPTCHHPSRFC 1138
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
+S +C+ + CD DCS+G DEG C+ + L CSH C P G +C CP +
Sbjct: 1139 DNSTKCITVDHLCDNIADCSDGSDEGGRCSEQLCDLRLDCSHYCHNAPEGLICSCPPDLH 1198
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
P++ C A C G C Q C Y C C +GY L D +C + +
Sbjct: 1199 LQPDRIHCSKAHPCDTWGVCSQKCIAVGERYKCGCFKGYVLESDRFTCKSTS---GATPY 1255
Query: 466 IIFSSTVDIRRIHL 479
+IFS+ +++ + L
Sbjct: 1256 VIFSNRHELKAVEL 1269
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 111/226 (49%), Gaps = 28/226 (12%)
Query: 174 SSNQCVALSKFCDGKPDC---------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
S+ C++L CDGK DC S+ E+ C QF CG +CIP SW C
Sbjct: 2669 SNGTCISLEARCDGKDDCHDAKSTRGLSSDEENCRVMEGHCQNDQFMCGDSRCIPLSWHC 2728
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+G DCL D SDE + C HQC + Q +C S +CIP +W CD DC +D +DE
Sbjct: 2729 NGNPDCL-DNSDEYD-CHHQCRSDQFKCDNS-ECIPLSWQCDGHPDC-----MDQSDESK 2780
Query: 285 D-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ +C NG +C + +CI WLCD E DC +D DE D+ +C
Sbjct: 2781 HCELRECENGDFRCNSTGRCISRLWLCDGEADC-----LDGADEHKDQ----GCGVCTSE 2831
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+C + C+ +CDG DC++G DE P C+ + C++
Sbjct: 2832 HFQC-VNGVCINKMYYCDGDKDCNDGSDEPPECHKTCTSDEFACNN 2876
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 107/243 (44%), Gaps = 44/243 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA----ECTPGQFSCGMGKCIPE 220
C P RC SS +C+ +S CDG PDC+N EDE P C+ C P F C KCIP
Sbjct: 3507 CSPQHYRC-SSGRCIPMSWRCDGDPDCANNEDEPPSCSQPEFHTCEPTYFKCKNNKCIPG 3565
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC D SDE + C + +C +CI CD E C D +
Sbjct: 3566 RWRCDYDNDC-GDSSDEVDCVPRNCSESEFRCG-DGRCIRGAQKCDGEFQCE-----DRS 3618
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------TDDIVDN-------- 324
DE H C + QCA + CI W CD E DCS +D DN
Sbjct: 3619 DEANCHTH-CKKNEFQCANPQVCIYLEWKCDGEADCSDGSDEANCSDTCPDNGFKCHNGL 3677
Query: 325 -TDEDW------------DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+EDW D+ F + V C P RC ++ CV +S CDG C +G D
Sbjct: 3678 CINEDWRCDGQKDCEDGSDEMFC-SLVGCLPGRFRC-KNHTCVPVSFLCDGHDQCEDGSD 3735
Query: 372 EGP 374
E P
Sbjct: 3736 EDP 3738
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 134/316 (42%), Gaps = 32/316 (10%)
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES- 153
D P IF + + + GEN TKN L + D + C S V
Sbjct: 806 DQSNPPIFDI-KLYDATAQQGENE---CTKNTPDCPELCLPTPSDPVCECSSGYKNVNKT 861
Query: 154 -VRVDGSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECT 206
VR + A +C P++ +C + +C+ + CD +C + DE GP + C
Sbjct: 862 CVRDVAPNQAFSVCGPHDFQC-KNLKCIPYQQTCDRIDNCGDQSDEALGPDGPCKDVICP 920
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
Q C CI + W CDG DC++ ++ C C Q +CA+SK+CIP W CD
Sbjct: 921 ANQIKCDNQTCISKYWACDGEQDCVDGSDEDEKRCSEVCSAAQFKCAVSKRCIPSVWKCD 980
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC +D+ D D QC + CA + +CI CD DD D++D
Sbjct: 981 NVADCGPEDMSDEADC---VKKQCEVNEFTCA-NGRCISQVLYCD-----GVDDCKDSSD 1031
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--EN 384
E N C E C S+ C+ SK CDG+ DC+ G DE CN +C
Sbjct: 1032 E-------INCTECQVTEFFCPSTATCLPNSKKCDGQIDCNGGYDEYE-CNENLNCGKTE 1083
Query: 385 LKCSHKCSPTPRGAMC 400
KC++ P +C
Sbjct: 1084 FKCANNLECIPESYVC 1099
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 99/229 (43%), Gaps = 39/229 (17%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ C+ PDC GEDE A C P QF C KCIP W CD DC D SD
Sbjct: 3439 RCIPSKFRCNKHPDCPLGEDESSCPPATCPPNQFKCANDKCIPAVWVCDTDNDC-GDNSD 3497
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKFHQCFN 292
E C + + Q S +CIP +W CD + DC+ +N DE +FH C
Sbjct: 3498 EQQDCQSRTCSPQHYRCSSGRCIPMSWRCDGDPDCA-----NNEDEPPSCSQPEFHTCEP 3552
Query: 293 GQVQCALSKKCIPHNWLCDEEMDC--STDDI----------------------VDNTDED 328
+C + KCIP W CD + DC S+D++ D +
Sbjct: 3553 TYFKCK-NNKCIPGRWRCDYDNDCGDSSDEVDCVPRNCSESEFRCGDGRCIRGAQKCDGE 3611
Query: 329 WDKYFSHNAVLCH----PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ + CH NE +C + C+ L CDG+ DCS+G DE
Sbjct: 3612 FQCEDRSDEANCHTHCKKNEFQCANPQVCIYLEWKCDGEADCSDGSDEA 3660
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 124/345 (35%), Gaps = 86/345 (24%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
I+P R+ M G+N V NI WPS L ID+ + LYW D HL +ESV +G +
Sbjct: 701 IYPNKGRIHVVNMDGKNLKDFVEVNIDWPSGLTIDFVEKRLYWSDRHLRKIESVDFNGVN 760
Query: 161 N-----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG--------EDEGPFCNAECTP 207
V+ P L G + + ++F G N + P + +
Sbjct: 761 RRVELAKVMETPFGLALGPG-KTLYFTEFTKGTVMAYNNKTGFRQLDQSNPPIFDIKLYD 819
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSD--------------------EPNTCIHQCFN 247
G +C + C CL SD PN C
Sbjct: 820 ATAQQGENECTKNTPDCPEL--CLPTPSDPVCECSSGYKNVNKTCVRDVAPNQAFSVCGP 877
Query: 248 GQVQCALSKKCIPHNWLCDEEMDC------------------------------------ 271
QC + KCIP+ CD +C
Sbjct: 878 HDFQCK-NLKCIPYQQTCDRIDNCGDQSDEALGPDGPCKDVICPANQIKCDNQTCISKYW 936
Query: 272 ---STDDIVDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
D VD +DED + + C Q +CA+SK+CIP W CD DC +D+ D D
Sbjct: 937 ACDGEQDCVDGSDEDEKRCSEVCSAAQFKCAVSKRCIPSVWKCDNVADCGPEDMSDEADC 996
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C NE C ++ +C++ +CDG DC + DE
Sbjct: 997 VKKQ--------CEVNEFTC-ANGRCISQVLYCDGVDDCKDSSDE 1032
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 89/177 (50%), Gaps = 17/177 (9%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R D ++ C NE +C + C+ L CDG+ DCS+G DE C+ C F C
Sbjct: 3617 RSDEANCHTHCKKNEFQCANPQVCIYLEWKCDGEADCSDGSDEAN-CSDTCPDNGFKCHN 3675
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G CI E W+CDG DC EDGSDE + C G+ +C + C+P ++LCD C
Sbjct: 3676 GLCINEDWRCDGQKDC-EDGSDEMFCSLVGCLPGRFRCK-NHTCVPVSFLCDGHDQCE-- 3731
Query: 275 DIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D +DED +F+ C Q C + CI ++ CD DCS DN+DE+
Sbjct: 3732 ---DGSDEDPHICHRFNICPPDQFTCK-NGHCIKNSLRCDGRNDCS-----DNSDEE 3779
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 105/258 (40%), Gaps = 73/258 (28%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP-----------------------------F 200
RC SS +C+ CD PDC + DE F
Sbjct: 2580 FRC-SSGECIQKVLRCDNDPDCDDASDEMGCEVRNCTLDFHDGNMINCENTTACIHKDWF 2638
Query: 201 CNAE------------------CTPGQFSCGMGKCIPESWKCDGFVDCLED------GSD 236
C+ E C QF C G CI +CDG DC + SD
Sbjct: 2639 CDGENDCWDWADEKNCTGREKRCDIFQFQCSNGTCISLEARCDGKDDCHDAKSTRGLSSD 2698
Query: 237 EPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
E N + + C N Q C S +CIP +W C+ DC +DN+DE +D HQC + Q
Sbjct: 2699 EENCRVMEGHCQNDQFMCGDS-RCIPLSWHCNGNPDC-----LDNSDE-YDCHHQCRSDQ 2751
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C S +CIP +W CD DC +D +DE C + RC S+ +C+
Sbjct: 2752 FKCDNS-ECIPLSWQCDGHPDC-----MDQSDESKHCELRE----CENGDFRCNSTGRCI 2801
Query: 355 ALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 2802 SRLWLCDGEADCLDGADE 2819
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESWKCD 225
+ RC S CV CDG CS+ DE P +C + C G F C +C+ KC+
Sbjct: 2500 DSFRC-SDGGCVPFKLTCDGIAHCSDKSDEEPGYCGHRTCLQGWFHCNNKRCVERKDKCN 2558
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI---VDNT 280
G DC D SDE N C + S +CI CD + DC ++D++ V N
Sbjct: 2559 GVDDC-GDASDEENC---SCSEDEYFRCSSGECIQKVLRCDNDPDCDDASDEMGCEVRNC 2614
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D FH + C + CI +W CD E DC WD N C
Sbjct: 2615 TLD---FHD--GNMINCENTTACIHKDWFCDGENDC------------WDWADEKN---C 2654
Query: 341 HPNELRCG------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
E RC S+ C++L CDGK DC + + +++ +C ++
Sbjct: 2655 TGREKRCDIFQFQCSNGTCISLEARCDGKDDCHDAKSTRGLSSDEENCRVME 2706
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 136/383 (35%), Gaps = 124/383 (32%)
Query: 100 EIFPLDER---LEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSHLNTVE 152
E+F D R + + + G N ++++ +Q ID +D +YW D +VE
Sbjct: 3207 ELFWADAREDYIAVSDLDGHNIHRIMSREKNHYLQLHHVFAIDIWEDYIYWTDWETKSVE 3266
Query: 153 SVRVDGSHN-----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-- 205
+N + P ++R + + C E C+A C
Sbjct: 3267 RCHKYTGNNCTKIMTTVHRPMDIRVVHPLKQPKIKNPC-----------EKANCSALCLL 3315
Query: 206 TPGQFSCGMGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
TP + KC+ PE++ EDG +C C + +C S KCIP W
Sbjct: 3316 TPQE---PFYKCVCPENYVLK------EDGK----SCEANCTSAHFECKKSYKCIPFWWK 3362
Query: 265 CDEEMDC-----------------------------------STDDIVDNTDEDWDKFHQ 289
CD + DC DD D +DE + +
Sbjct: 3363 CDTQDDCGDGSDEPSDCRPFKCMPGQYQCDNGHCTHPSDLCNGNDDCGDQSDEKDCEHYT 3422
Query: 290 CFNGQVQC----ALSKKCIPHNWLCDEEMDC----------------------------- 316
C N Q +C ++ +CIP + C++ DC
Sbjct: 3423 CLNTQFRCPGNGTIAPRCIPSKFRCNKHPDCPLGEDESSCPPATCPPNQFKCANDKCIPA 3482
Query: 317 -----STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ +D DN+DE D + C P RC SS +C+ +S CDG PDC+N ED
Sbjct: 3483 VWVCDTDNDCGDNSDEQQD----CQSRTCSPQHYRC-SSGRCIPMSWRCDGDPDCANNED 3537
Query: 372 EGPFCNNKADCENLKCSHKCSPT 394
E P C+ H C PT
Sbjct: 3538 EPPSCSQPE-------FHTCEPT 3553
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E A M G R LV I +P+ L +DY LYW D TVE+V+ DGS V+ H
Sbjct: 3954 RIETAHMDGNKRRVLVNSAILYPTGLAVDYTTRRLYWADPKTMTVETVKFDGSDRHVVRH 4013
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 56/120 (46%), Gaps = 18/120 (15%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG-KCIPESWKCDGFVDCLE-- 232
C+ CDG+PDC++G DE C C P QF C + KC+P W CD DC
Sbjct: 44 CIPSHWRCDGQPDCADGSDEPFECIQTQTCRPEQFQCALTRKCLPLGWVCDEDQDCGTST 103
Query: 233 ----DGSDE-PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
D SDE P+ C + C Q +C +C P CD++ DC N ++WD
Sbjct: 104 TLGVDTSDEDPSQCHKEIKCPWNQAKCGFGPECAPIKKFCDKQRDCV------NGGDEWD 157
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 116/313 (37%), Gaps = 49/313 (15%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D A +++ D RL E+ G NR L Q P +L + D +YW D L+
Sbjct: 2355 TLDHKAQKLYWGDARLDKIERCEYDGSNRVILAKVTPQHPFALAV--YADYIYWTDWMLH 2412
Query: 150 TVESVRVDGSHNAV----------------------LCHPNELRCGSSNQCVALSKFCDG 187
V N V +P ++ G + L+
Sbjct: 2413 AVLRADKLTGQNVVWLRRDVARPMGIVTIANDTEDCFYNPCKILNGGCEEICTLNASAMV 2472
Query: 188 KPDCSNG----EDEGP-FCNAEC--TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
+ C +G ED + N + F C G C+P CDG C + +EP
Sbjct: 2473 QCSCMDGRILAEDRKRCYSNTKACDQYDSFRCSDGGCVPFKLTCDGIAHCSDKSDEEPGY 2532
Query: 241 CIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
C H+ C G C +K+C+ C+ DC +N D++ +C +G+
Sbjct: 2533 CGHRTCLQGWFHCN-NKRCVERKDKCNGVDDCGDASDEENCSCSEDEYFRCSSGE----- 2586
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
CI CD + DC D +DE + + N + C ++ C+ F
Sbjct: 2587 ---CIQKVLRCDNDPDCD-----DASDEMGCEVRNCTLDFHDGNMINCENTTACIHKDWF 2638
Query: 360 CDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 2639 CDGENDCWDWADE 2651
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+ + G NR ++ +I+ P++L +D+ LYW D+ L+ +E DGS+ +L
Sbjct: 2330 IERVFLSGYNREAIIKTDIRMPNALTLDHKAQKLYWGDARLDKIERCEYDGSNRVIL 2386
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----- 106
+A+++ RN Q++ R N L+ + DL P LD
Sbjct: 324 FESVQQMAMDWVSRNWYFLDDQREIFLVCSERLEWCNILIEN-DLSKPRALALDPTRGYM 382
Query: 107 ----------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
+E+ M G R +V I +P + +DY +YW D++L+ VE V
Sbjct: 383 FFTKWGHSPPMVERCKMDGSERKAVVNHKIVYPYGVTVDYPTQHIYWVDTYLDFVERVDY 442
Query: 157 DGSHNAVL 164
DG +
Sbjct: 443 DGKDRKTI 450
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 13/118 (11%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----------- 106
LA+++ N C ++ + RL ++ + LL + ++ P +D
Sbjct: 1954 LAVDWIAGNMYWCDSKRGVIEVARLDGSKQHVLLAN-EIGKPTAIAVDPARGVMVWAGGP 2012
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RLE A M G NR+ LV ++ S + +D +Q +Y+CD+ +T+E + DGS + VL
Sbjct: 2013 RLEIATMDGRNRNLLVNSSVAI-SDVTLDSDQRKVYFCDTSRHTIEVIGYDGSGHEVL 2069
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI--VDNTDEDWDKYFKRI 51
C Q QCAL++KC+P W+CDE+ DC T VD +DED + K I
Sbjct: 73 CRPEQFQCALTRKCLPLGWVCDEDQDCGTSTTLGVDTSDEDPSQCHKEI 121
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 53/120 (44%), Gaps = 20/120 (16%)
Query: 58 LALEFNHRNQSLC--FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD---------- 105
LA+++ RN C + VSS+ R ++ L S L P LD
Sbjct: 3112 LAVDWVGRNLYWCDKGLDTLEVSSLDGRFRRV---LISKGLEEPRAVALDPLRGYLYWTD 3168
Query: 106 ----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KAGM G N+ +V ++ WP++L I Y L+W D+ + + +DG HN
Sbjct: 3169 WGTHAHIGKAGMDGSNQQIIVNSSLGWPNALTISYETKELFWADAREDYIAVSDLDG-HN 3227
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 12/106 (11%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG--- 215
H + C N+ +CG +C + KFCD + DC NG DE FC N+ + + C G
Sbjct: 118 HKEIKCPWNQAKCGFGPECAPIKKFCDKQRDCVNGGDEWDFCRNSTFSCDKLVCSYGCRP 177
Query: 216 -----KCI-PESWKCDGFVDCLEDGSDEPNTCIHQCFN--GQVQCA 253
KC PE + +G D + NTC C N G +C+
Sbjct: 178 TGEGPKCFCPEGQRPEGSRCVDADECELDNTCAQVCKNTVGSFECS 223
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLN 149
WD AP R+E+ + G +R +V + WP+ L +DY +YW D+ +
Sbjct: 1392 WDNNAP-------RIERCSLAGLDREIVVRVDKIADAGWPNGLTLDYVLRRIYWIDARSD 1444
Query: 150 TVESVRVDGS-HNAVL 164
++ + + DGS H+ V+
Sbjct: 1445 SIHTTKYDGSEHHEVM 1460
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGEN 117
LAL N++ L I + ++++ A+ +DLL D I + + E
Sbjct: 1881 LALNGNNQTAVLGPISRISMATAIDFVAE-SDLLFWADSDRGSITSIKRDGTQRRHIIEP 1939
Query: 118 RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + + W + L +D+ +YWCDS +E R+DGS VL
Sbjct: 1940 TEAMDSVPVDWLTGLAVDWIAGNMYWCDSKRGVIEVARLDGSKQHVL 1986
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
C Q +CA+SK+CIP W CD DC +D+ D D
Sbjct: 959 CSAAQFKCAVSKRCIPSVWKCDNVADCGPEDMSDEAD 995
>gi|427796811|gb|JAA63857.1| Putative prolow-density lipoprotein receptor-related protein 1,
partial [Rhipicephalus pulchellus]
Length = 4696
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/246 (41%), Positives = 144/246 (58%), Gaps = 16/246 (6%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKK 302
+C + Q CA + CIP W CD DC+ D +DE D C +GQ QCALS++
Sbjct: 48 KCPDNQFACADGQGCIPKQWKCDFSPDCA-----DGSDEPEDCVPSTCASGQFQCALSRR 102
Query: 303 CIPHNWLCDEEMDCS-TDDIV-DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CIP ++CD E DC T+D+V D +DED + N+ C N RC C ++ C
Sbjct: 103 CIPKGFVCDRESDCGFTEDLVPDTSDEDARRCHLGNS--CPQNYFRCHDGITCRRIAVLC 160
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK---TQCVDAD 417
DG DC + DEGPFC+ A C N C H C P P+G +CFC G P++ + CVDAD
Sbjct: 161 DGHHDCPDFSDEGPFCSETAQCANASCDHGCKPGPQGPVCFCKKGMEPHREMPSLCVDAD 220
Query: 418 ECLIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
C + G+CDQ CT+ S+ CSC EGY + G C +NVP+DE A+++F+++++I+
Sbjct: 221 PCSVPGTCDQNCTSGPKGSHNCSCVEGY--KAVGSQCFGINVPEDEEATLLFANSINIQH 278
Query: 477 IHLNGS 482
I L+GS
Sbjct: 279 IRLDGS 284
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 160/325 (49%), Gaps = 26/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSC-GMGKCIPESW 222
C ++ +C + +C++L CDG+PDCS+G DE P C +C +F C G+CIP +W
Sbjct: 2816 CARDQFQC-TDGECISLLNRCDGQPDCSDGSDEPPACRMRQCGDSEFKCNSTGQCIPNAW 2874
Query: 223 KCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG DCL++ ++P N + QC + +C L++ CI ++ CD + DC NT
Sbjct: 2875 KCDGAGDCLDNSDEDPSLNCTLRQCKANEFKC-LNQVCILDSFYCDGDHDCEDGSDEPNT 2933
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---KYFSHNA 337
E H+C Q C + +CI ++ C+ DD D +DE D K + NA
Sbjct: 2934 CEK----HRCRENQFACN-NGRCISNHATCN-----GWDDCRDGSDEKPDLCHKQITKNA 2983
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C C + N CV S C+G+ DC + DE N+ + CS C P G
Sbjct: 2984 S-CPDGNFLCANKN-CVNDSLLCNGENDCGDFSDEDQCNVNECELSTHACSQLCEDRPIG 3041
Query: 398 AMCFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C C G P + C D DEC C C NT+ S+ C+C +GY G++C A
Sbjct: 3042 YKCSCHPGFEPKYDGRICEDVDECTTKYPCTHHCRNTYGSFACTCADGYFSIDAGRTCKA 3101
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLN 480
+ + A ++ S+ IR+I L+
Sbjct: 3102 NSSVR---AHLLLSNRYYIRQIDLH 3123
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 158/331 (47%), Gaps = 41/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E RC S+ +C+ L CD DC +G DE C G CG G CI ++ C
Sbjct: 1046 CDVTEFRC-SNQRCIPLDYVCDVDDDCRDGSDEKDCAAVSCDRGH-RCGTGHCIWDALVC 1103
Query: 225 DGFVDCLEDGSDEPN-------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+G DC +DGSDE N T + C Q C + +C+P +W CD + DC +
Sbjct: 1104 NGVWDC-QDGSDEANCTGSRNSTNVPPCHKDQFGCG-NGECVPKSWHCDGKPDC-----L 1156
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C + + C ++CIP ++CD + DC +DN+DE SH
Sbjct: 1157 DASDEKGCGNVNCSSNEFLCENRQECIPVQFVCDSDHDC-----MDNSDEKNCTSVSH-- 1209
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCENLKCSHKCSP 393
+ C C ++ +C+ +++ CD PDC +G DEG C+ N DCE+ C P
Sbjct: 1210 LKCPKPSHTCDNNTRCIEVTRLCDKVPDCKDGSDEGGLCDEGLCNPNDCEDF-----CRP 1264
Query: 394 TPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
TP G C+C G N C D C G C Q C S+ C+C +GY L D
Sbjct: 1265 TPYGKTCYCRDGLQLAINGRSCTDKKPCSQWGVCSQKCFQLKHSHKCTCEKGYELASDMF 1324
Query: 452 SCTAVNVPQDEPAS--IIFSSTVDIRRIHLN 480
+C + +PA+ +IFS+ ++R + LN
Sbjct: 1325 TCKST-----DPATPYVIFSNRHELRSVDLN 1350
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C NE +C ++ +C+ S C+G+ +C + DE CN+ C +F C + G CI + W+
Sbjct: 3665 CLDNEFQC-ANGRCIKASMHCNGEFNCEDRSDEAN-CNSTCRSNEFYCKVVGHCIHKEWR 3722
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG VDC DGSDE I C G+ QC + CI ++ CD E DC D +DED
Sbjct: 3723 CDGDVDC-ADGSDEQGCNIAACRAGEFQCQ-NGACITSSFQCDNEDDCG-----DGSDED 3775
Query: 284 WDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ C G+ +C S C+ + +CD + DC DN+DED + C
Sbjct: 3776 HNHCLHFACPPGKFKCKNSL-CVQGSGVCDGKDDCG-----DNSDED-----TPQCHHCK 3824
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKC 391
P+E RC S +C+A + FC+G DC +G DE GP C CSH C
Sbjct: 3825 PHEFRC-KSQRCIASNLFCNGVDDCGDGTDEEDCDTGP-------CRFGTCSHTC 3871
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMGKC 217
LC P + +C + QC+ S+ CDGKP C+ G+DE C P QF C C
Sbjct: 3458 FLCSPGQFQC-ADEQCIQPSQLCDGKPQCTGGDDEHDCDKYTCLPSQFKCPGNGTSQAYC 3516
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
I + +CDG +DC G DE N C Q +C S +CIP W CD + DC
Sbjct: 3517 ISVASRCDGHIDCAMGGEDELNCPPKTCPANQFKCNNS-RCIPDVWTCDGDNDC-----F 3570
Query: 278 DNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + +C +C+ S +CIP W CD + DCS ED
Sbjct: 3571 DGSDEPPNCADRECPPNSFRCS-SGRCIPLAWRCDGDYDCS-------DREDEGSSCDEE 3622
Query: 337 AVLCHPNELRC 347
A+ CHP+ RC
Sbjct: 3623 AMSCHPSYFRC 3633
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 110/266 (41%), Gaps = 53/266 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIP 219
C E C ++ +C+ CDG DC + DE G C QF C +CI
Sbjct: 916 CREGEFECKTNQRCIDKRYLCDGDNDCGDNSDEDSSPSGICEKVTCQEDQFRCDANRCIS 975
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC++ +EP + C Q C ++ KCIPH+W CD + DC D
Sbjct: 976 LHWVCDGERDCVDGSDEEPTSKCRNTTCSAAQYTCKVTGKCIPHSWTCDSDKDCGEGDTS 1035
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL--------------------CDEEMDCS 317
D + + + +C + +C+ +++CIP +++ CD C
Sbjct: 1036 D--EHEACVYPECDVTEFRCS-NQRCIPLDYVCDVDDDCRDGSDEKDCAAVSCDRGHRCG 1092
Query: 318 TD-------------DIVDNTDED--WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
T D D +DE S N CH ++ CG+ +CV S CDG
Sbjct: 1093 TGHCIWDALVCNGVWDCQDGSDEANCTGSRNSTNVPPCHKDQFGCGNG-ECVPKSWHCDG 1151
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCS 388
KPDC + DE C N+ CS
Sbjct: 1152 KPDCLDASDE-------KGCGNVNCS 1170
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWK 223
C ++ C + +C+ CD + DC +G DE P C C+PGQF C +CI S
Sbjct: 3419 CTSSQFVCEKTYKCIPSLWRCDTQDDCGDGSDEPPSCPPFLCSPGQFQCADEQCIQPSQL 3478
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQC----ALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG C G DE + + C Q +C CI CD +DC+ +
Sbjct: 3479 CDGKPQCT-GGDDEHDCDKYTCLPSQFKCPGNGTSQAYCISVASRCDGHIDCA----MGG 3533
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNA 337
DE C Q +C S +CIP W CD + DC +D+ + D +
Sbjct: 3534 EDELNCPPKTCPANQFKCNNS-RCIPDVWTCDGDNDCFDGSDEPPNCADRE--------- 3583
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C PN RC SS +C+ L+ CDG DCS+ EDEG C+ +A
Sbjct: 3584 --CPPNSFRC-SSGRCIPLAWRCDGDYDCSDREDEGSSCDEEA 3623
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 145/380 (38%), Gaps = 75/380 (19%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
+ + LN LA+++ RN + RL A + L + ++ P +D
Sbjct: 662 FTSKGLNNCEGLAVDWAGRNLYWTDEGHLGIWVARLDNATLRRQLVALNMSHPRAIVVDP 721
Query: 107 R------------------------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ +E+ M G +R V++++ WP+ L IDY LY
Sbjct: 722 KRGYMYWSDWSTEPYPPGDGRDGGKIERTYMDGSHREVFVSQDLHWPNGLSIDYANRQLY 781
Query: 143 WCDSHLNTVES---------VRVDGSH---NAVLCHPNELRCGSSNQCVALSKFCDGKPD 190
WCD + + +E V V+G H L H + Q + +F +
Sbjct: 782 WCDVYFHRIERIGLDGKGREVLVEGEHLDHPYGLAHFGNFIYWTEFQKGHILRFDTVSKN 841
Query: 191 CSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248
+ + E P F S G G C ++ C + +G
Sbjct: 842 ITKLKTENPPLFELRFFDEASQSTGSG-CSSDNGGCSQLCLSIPEG-------------- 886
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
H+ C + +TD I + ++ + +C G+ +C +++CI +
Sbjct: 887 ------------HSCACGDGYYLATDGITCHRSANYTEPSRCREGEFECKTNQRCIDKRY 934
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
LCD + DC DN+DED V C ++ RC +N+C++L CDG+ DC +
Sbjct: 935 LCDGDNDCG-----DNSDEDSSPSGICEKVTCQEDQFRC-DANRCISLHWVCDGERDCVD 988
Query: 369 GEDEGPFCNNKADCENLKCS 388
G DE P + C N CS
Sbjct: 989 GSDEEP----TSKCRNTTCS 1004
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 114/287 (39%), Gaps = 79/287 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC----------GM 214
C ++ +C + C+ + CD +P+C + DE +CT +
Sbjct: 2680 CKGDQFKC-ARGPCIPSTYVCDFEPECPDASDEINCPKPDCTRHPMTLHPNLLLVNCERT 2738
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEE 268
CI W CDG DC D SDE N Q QV C L+ CIP +W CD +
Sbjct: 2739 TACIHLGWICDGQNDCW-DFSDEENC---QTTTPQVSCPAMSFRCLNGLCIPDSWRCDRD 2794
Query: 269 MDC--------STD-------------------------------DIVDNTDEDWD-KFH 288
MDC S+D D D +DE +
Sbjct: 2795 MDCEDGHNGSLSSDEKGCEYKCARDQFQCTDGECISLLNRCDGQPDCSDGSDEPPACRMR 2854
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELR 346
QC + + +C + +CIP+ W CD DC +DN+DED S N L C NE +
Sbjct: 2855 QCGDSEFKCNSTGQCIPNAWKCDGAGDC-----LDNSDED----PSLNCTLRQCKANEFK 2905
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC------NNKADCENLKC 387
C + C+ S +CDG DC +G DE C N+ C N +C
Sbjct: 2906 C-LNQVCILDSFYCDGDHDCEDGSDEPNTCEKHRCRENQFACNNGRC 2951
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 144/389 (37%), Gaps = 127/389 (32%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+++E+ +G +R L++++ Q P L + D ++W D + V + V+
Sbjct: 2478 DKIERCDFNGGDRHVLLSEHPQHPFDLAV--YGDFVFWTDWVAHAVLRANKHTGADVVVL 2535
Query: 166 HPNELR-----------------------CGSSNQCVALSK---FCDGKPDCSNGEDEGP 199
N +R G +QCV + +C P S D G
Sbjct: 2536 RKNVVRPMGIIAVANDTNDCTLSPCSTLNGGCEDQCVVATNGTIYCQCFPGRSLMSD-GR 2594
Query: 200 FCN---AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------PNTC---IHQCFN 247
C A CT +F CG G CIP CDG C DGSDE TC ++C N
Sbjct: 2595 RCAVKIANCTSAEFQCGDGACIPFELACDGVQAC-PDGSDENVIDCAMLTCPEGFYRCHN 2653
Query: 248 G-----------------------------QVQCALSKKCIPHNWLCD---------EEM 269
G Q +CA CIP ++CD +E+
Sbjct: 2654 GRCVSKNRVCDGLDACGDYSDELNCTCKGDQFKCARG-PCIPSTYVCDFEPECPDASDEI 2712
Query: 270 DCSTDD----------------------------IVDNTDEDWDKFH----QCFNGQVQC 297
+C D I D ++ WD Q QV C
Sbjct: 2713 NCPKPDCTRHPMTLHPNLLLVNCERTTACIHLGWICDGQNDCWDFSDEENCQTTTPQVSC 2772
Query: 298 A------LSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
L+ CIP +W CD +MDC + ++DE +Y C ++ +C +
Sbjct: 2773 PAMSFRCLNGLCIPDSWRCDRDMDCEDGHNGSLSSDEKGCEY------KCARDQFQC-TD 2825
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+C++L CDG+PDCS+G DE P C +
Sbjct: 2826 GECISLLNRCDGQPDCSDGSDEPPACRMR 2854
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G NR LV ++Q + L ID+ +D LYWCDS +T+E V +DG+ +
Sbjct: 2107 KIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWCDSRTDTIERVNLDGTGRETVFP 2166
Query: 167 P 167
P
Sbjct: 2167 P 2167
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ W AP LE+A + G R+ LV + I +P + +D ++ +YW D++L+
Sbjct: 403 FVTEWGSAAPV-------LERAHLDGTERTKLVEQKIVYPFGIAVDLPREEVYWVDTYLD 455
Query: 150 TVESVRVDGSHNAVLCHPNELR 171
VE + DGS + +R
Sbjct: 456 MVERISYDGSRRTTVFRGAPMR 477
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 11/120 (9%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG-KCIPE 220
V C N+ C C+ CD PDC++G DE C + C GQF C + +CIP+
Sbjct: 47 VKCPDNQFACADGQGCIPKQWKCDFSPDCADGSDEPEDCVPSTCASGQFQCALSRRCIPK 106
Query: 221 SWKCD-----GFV-DCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ CD GF D + D SDE H C +C C LCD DC
Sbjct: 107 GFVCDRESDCGFTEDLVPDTSDEDARRCHLGNSCPQNYFRCHDGITCRRIAVLCDGHHDC 166
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 2/41 (4%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIV-DNTDED 43
C +GQ QCALS++CIP ++CD E DC T+D+V D +DED
Sbjct: 90 CASGQFQCALSRRCIPKGFVCDRESDCGFTEDLVPDTSDED 130
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL-----VTKNIQWPSSLVIDYNQDILYWCDSHL 148
WD AP R+E+A M G+ R + VT+ WP+ L +D+ +YW D+
Sbjct: 1472 WDKEAP-------RIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYWIDARS 1524
Query: 149 NTVESVRVDGS 159
++V + R DGS
Sbjct: 1525 DSVHTSRYDGS 1535
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ +A + G N LV + WP+ + +D+ +YW D + VE+ +DG ++
Sbjct: 4063 RIGRANLDGSNPRTLVDARVIWPTGIAVDHAAGRIYWADRKASLVETANIDGKLRHIV 4120
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
++K+ ++G ++T +I+ P+ + ID+ LYW D+ L+ +E +G VL
Sbjct: 2437 IQKSYLNGYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSE 2496
Query: 166 ---HPNEL 170
HP +L
Sbjct: 2497 HPQHPFDL 2504
>gi|432117303|gb|ELK37690.1| Low-density lipoprotein receptor-related protein 2 [Myotis davidii]
Length = 1645
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/323 (37%), Positives = 166/323 (51%), Gaps = 31/323 (9%)
Query: 156 VDGSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
VDGS P E +RC + +CV S CDG DCS+ EDE + +C+ +F C
Sbjct: 661 VDGSDELDCWKPTEDCSVRCDNKTRCVPKSWLCDGNADCSDKEDEQGCIHEKCSISEFRC 720
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
G+CI S CDG DCL+ +E P QC +G+V+C S +C+ W+CD ++D
Sbjct: 721 KNGQCISYSLHCDGNRDCLDRSDEEGCPVAWPQQCPSGEVKCPRSGECVLTEWICDHDLD 780
Query: 271 CSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
C D +DE + +C + Q CA + +C+P +W CD + DC D +DE
Sbjct: 781 CK-----DGSDEKNCHPEELRCGSRQWSCASADQCMPDSWRCDGQRDCR-----DGSDE- 829
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ C +E +C SS C+ LS CDGK DC++G DEG C+ A C +CS
Sbjct: 830 ----AACAPEKCGSSEFQCRSS-ACLHLSLVCDGKEDCADGSDEGGQCSASA-CGQAQCS 883
Query: 389 HKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGS--CDQTCTNTHLSYVCSCTEGY 444
H C P+PRG +C C G + C D DEC G C QTC NT SY C+C GY
Sbjct: 884 HTCYPSPRGPICACEQGFELKSSGGSCEDVDECQRSGGRPCSQTCINTEGSYHCTCHPGY 943
Query: 445 TLRPDGKSCTAVNVPQDEPASII 467
L PDG +C A EP ++
Sbjct: 944 LLEPDGHTCKATGT---EPILLV 963
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 5/109 (4%)
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNK 410
CV ++ CDG DC + DE C N C +CS G C C G P+
Sbjct: 208 CVMETRTCDGINDCGDSSDED-ICGKSCSLANGGCEGQCSDASWGVRCSCGTGWQLQPDG 266
Query: 411 TQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C D DEC + S CDQ C NT SY C CT+GY L +G C + +
Sbjct: 267 QSCGDIDECSMAYSPCDQLCHNTPGSYSCGCTQGYQLY-NGTRCQVIEL 314
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+AGM G R L+ K + WP+S+V+D ++W D + + S +DG+ ++L
Sbjct: 1103 IEQAGMDGSRRKVLINKGLGWPTSIVLDQLSWKIFWSDDKFHCIGSANLDGTGISML 1159
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 26/135 (19%)
Query: 50 RILNGTHTLALEFNHRNQ-SLCFIQQQ---NVSSVRLRCAQIND-----LLNSWDLPAPE 100
++ NGT +E N SL + Q S R+ CA ++D + DL PE
Sbjct: 302 QLYNGTRCQVIELKTVNSVSLDWFTGQLYWASSFARVICAGLSDGRGYVRILEKDL-VPE 360
Query: 101 ---IFPLDERL-------------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
+FP+ + L + AGM G +R L N++ P L +D+ LYW
Sbjct: 361 QLIVFPVKKYLYWVNRGQKGMRTIDTAGMDGSDRKVLAVVNMEDPVGLTLDHVTGRLYWI 420
Query: 145 DSHLNTVESVRVDGS 159
++ ++E+V VDGS
Sbjct: 421 SAYKESIETVNVDGS 435
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S++C + CDG DC+ G D+ C GQ+ C C+ E+ CDG DC D
Sbjct: 166 SSECRDAWELCDGPEDCAVGSDQAHCPRDHCLAGQWQCKNKVCVMETRTCDGINDC-GDS 224
Query: 235 SDE 237
SDE
Sbjct: 225 SDE 227
>gi|157115039|ref|XP_001652530.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108877064|gb|EAT41289.1| AAEL007041-PA [Aedes aegypti]
Length = 4649
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 109/286 (38%), Positives = 145/286 (50%), Gaps = 57/286 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIP 260
+ C F+CG GKCIP+ WKCD + DC DGSDE + HQC Q QC L+ KCIP
Sbjct: 23 DVTCPRSHFTCGDGKCIPQHWKCDTYADC-ADGSDEIDCDKAHQCKEEQFQCKLTNKCIP 81
Query: 261 HNWLCDEEMDCSTDD---IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+W CD + DC + +D +DED D C SK C+P +C
Sbjct: 82 RSWTCDGDADCGVVEKFQTIDVSDEDAD----------LCRSSKHCLPTQTVC------- 124
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
S+ +C+ + KFCDG DC+N E P N
Sbjct: 125 -------------------------------SNGKCLDIEKFCDGVWDCTNDELRCPK-N 152
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N ++C L+CS C TP G CFC G PN + C D DEC I+G CDQTC N SY
Sbjct: 153 NASECAKLQCSFDCRQTPNGPKCFCAKGSQPNGSLCEDFDECQIEGICDQTCKNLPGSYK 212
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH-LNGS 482
C+C GY R D K C A+N P++EP S++F+++ D+++ +NGS
Sbjct: 213 CTCASGYA-RIDNK-CLAINTPKEEPMSLLFATSADVQKFPVINGS 256
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 122/344 (35%), Positives = 166/344 (48%), Gaps = 28/344 (8%)
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG- 208
TV S+ D + C PN+ +C +S++C+ S CD PDC++G DEG C P
Sbjct: 2718 TVTSLSSDEVNCTRHCKPNQFQCLNSSECIPNSWQCDNNPDCADGSDEGEHCQQRICPDW 2777
Query: 209 QFSC-GMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCD 266
+F C G G+CIP+ W CDG VDC DG+DE N + ++ S + I ++CD
Sbjct: 2778 EFQCPGSGRCIPKKWMCDGEVDCFSDGADEKNCDTVTIGWDLDSFTCHSGERISRLFVCD 2837
Query: 267 EEMDCSTDDIVDNTDE-----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+ DC +D +DE D C + +C ++KCI N C+ DC
Sbjct: 2838 GDADC-----IDGSDEPINCTDSAVATACKADEFRCK-NQKCIASNLTCNVNNDCE---- 2887
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED + + P RC S C+ CDG+ DC + DE N+ D
Sbjct: 2888 -DGSDEDIQLCKNTTLICAGPELFRC-ESGVCITSGLLCDGQNDCGDWSDEKSCQINECD 2945
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C+H C G C C G NK C D DECL D C Q CTNT+ SY C
Sbjct: 2946 QMPDLCAHACEDREVGYECTCRPGFKVNVINKHLCDDVDECL-DRPCSQICTNTYGSYHC 3004
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC EGY R +G SC A ++ E +IFS+ +R + LNGS
Sbjct: 3005 SCQEGYVSRENG-SCKADSL---ETMKLIFSNRYYVREVDLNGS 3044
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 102/216 (47%), Gaps = 24/216 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C ++ +CGS +C+ CDG DC +G DE C G+F C G+CIP
Sbjct: 3455 NVTACADHQFKCGSG-KCITKVWACDGDVDCPDGSDEKNCGERTCENGEFRCNNGRCIPN 3513
Query: 221 SWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG DC DG DE C + C +C S KCIP W CD E DC
Sbjct: 3514 SWRCDGEDDC-HDGEDEKENCKQPDVVTCEASYFRCNNS-KCIPGRWQCDYENDCG---- 3567
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE K C + +C CI CD E +C D++DE+ +
Sbjct: 3568 -DNSDEVNCKMRNCSESEFRCR-DGYCIRGIRQCDGEYNCE-----DHSDEE------NC 3614
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C P+E +C N CV + CDG DC +G DE
Sbjct: 3615 DLSCKPDEFKCTGQNLCVNMKLLCDGDNDCIDGSDE 3650
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 158/358 (44%), Gaps = 46/358 (12%)
Query: 144 CDSHLNTVESVRVDGSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPF 200
CD +N ++ D ++ A V C N +C +S +C+ + CD PDC S+ DE P
Sbjct: 948 CDGTMNCIDETDEDYANCANVTCVDNFFQCVTSRRCIPKAWVCDRHPDCGPSDFSDEPPH 1007
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
C+ +C G+F C G CI + CDG +C D SDE C +C + C+ CI
Sbjct: 1008 CH-KC--GEFECKNGVCITFAQLCDGENNC-GDNSDEAQ-CDVECKPNEFYCS-PYGCID 1061
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL----------C 310
+ +CD +++C + F C +P + C
Sbjct: 1062 RSQMCDPKLNC------------LNAFSGCEQPANGTFSGTTIVPPEPVKTADEVKLAQC 1109
Query: 311 DEEMD--CSTDDIVDNTDEDWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPD 365
+E C TD N E + K NA L C + C +N C+ + + CDG+ D
Sbjct: 1110 KQEAKQFCGTDK---NCTEHYQK-LCQNATLPTACQYPDRICRPTNVCIKVDQLCDGRMD 1165
Query: 366 CSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLID 422
C + DEG C ++ D +CSH C P G +C CP PN C C
Sbjct: 1166 CPDNTDEGFRCKDQLCDKTTRECSHTCHNAPEGFVCSCPEHLYLQPNLKDCKVDHACEHW 1225
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+C Q CT Y CSC EGYTL D +C + N D P +IFS+ +IR + LN
Sbjct: 1226 GTCSQVCTPDGKHYKCSCKEGYTLTFDKFTCRSNN--PDAP-HVIFSNRQEIRGVDLN 1280
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/326 (30%), Positives = 137/326 (42%), Gaps = 40/326 (12%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ V C + RC +S +C+ CD + DC + DE C+ +F C G CI
Sbjct: 3537 DVVTCEASYFRCNNS-KCIPGRWQCDYENDCGDNSDEVNCKMRNCSESEFRCRDGYCIRG 3595
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+CDG +C ED SDE N C C + +C C+ LCD + DC +D +
Sbjct: 3596 IRQCDGEYNC-EDHSDEEN-CDLSCKPDEFKCTGQNLCVNMKLLCDGDNDC-----IDGS 3648
Query: 281 DED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DE+ D+F +C NG KCI NW+CD DD D +DE ++ H
Sbjct: 3649 DEENCECHEDEF-RCDNG--------KCILKNWVCD-----GIDDCFDRSDEKFEYCQEH 3694
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C+ +C +SN C+ CD K DC + DE +K +CS P
Sbjct: 3695 G---CNKRAFKCSNSN-CIRKGLVCDNKDDCGDNSDEKTSMCHKCPAGTFRCSSDSKCIP 3750
Query: 396 RGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKS 452
C A ++ CV D GSC Q C Y C C GY P +
Sbjct: 3751 SSFRCDGQANCIDESDELGCVRMDCGF--GSCSQICLVKKGYYNCQCAAGYRKGPLRNDT 3808
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIH 478
C A DEP ++ SS D R I+
Sbjct: 3809 CVAA----DEPGLLLVSSESDFRSIY 3830
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 129/302 (42%), Gaps = 41/302 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSC-GMGKCIPESW 222
+ RC ++ C++ CD PDC++ DE C+A + C C SW
Sbjct: 2606 KFRC-NNGLCISNKMRCDNDPDCADASDEIGCPKVRNCSAMHSGEFLQCPNTTACYMASW 2664
Query: 223 KCDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC D SDE N + + C + C + CIP NW CD E DC +
Sbjct: 2665 VCDGENDCW-DNSDEQNCTTSIVPTCPTDKFLCD-NGHCIPQNWRCDNEDDCLDGTVTSL 2722
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAV 338
+ ++ + C Q QC S +CIP++W CD DC+ D +DE H
Sbjct: 2723 SSDEVNCTRHCKPNQFQCLNSSECIPNSWQCDNNPDCA-----DGSDEG-----EHCQQR 2772
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDC-SNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
+C E +C S +C+ CDG+ DC S+G DE +C+ +
Sbjct: 2773 ICPDWEFQCPGSGRCIPKKWMCDGEVDCFSDGADE-------KNCDTVTIGWDLDSFT-- 2823
Query: 398 AMCFCPAGQNPNKTQCVDADECLIDGSCDQT-CTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C +G+ ++ D D IDGS + CT++ ++ C E R + C A
Sbjct: 2824 ----CHSGERISRLFVCDGDADCIDGSDEPINCTDSAVATACKADE---FRCKNQKCIAS 2876
Query: 457 NV 458
N+
Sbjct: 2877 NL 2878
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 197 EGPFCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCAL 254
+GP CN C F C +CI S CDG ++C+++ ++ C + C + QC
Sbjct: 921 DGP-CNPNCDLEHNFKCDDQRCINRSLVCDGTMNCIDETDEDYANCANVTCVDNFFQCVT 979
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
S++CIP W+CD DC D D H+C G+ +C + CI LCD E
Sbjct: 980 SRRCIPKAWVCDRHPDCGPSDFSDEPPH----CHKC--GEFECK-NGVCITFAQLCDGEN 1032
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
+C DN+DE + V C PNE C S C+ S+ CD K +C N
Sbjct: 1033 NCG-----DNSDE------AQCDVECKPNEFYC-SPYGCIDRSQMCDPKLNCLNA 1075
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/451 (21%), Positives = 158/451 (35%), Gaps = 123/451 (27%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D A +++ D R +E+A G NR L + P ++ + D+L+W D L+
Sbjct: 2383 TLDYQAKKLYWADARYDKIERADYDGRNRVVLAHSTPKHPFAMAV--YGDLLFWTDWILH 2440
Query: 150 TVESVRVDGSHNAVLCHPNELRCG------------SSNQCVALSKFCD--------GKP 189
V + + + +R S++ C L+ C+ GK
Sbjct: 2441 AVIRANKYSGSDVLWLRNDIVRPMGIVAVQKIDQDCSADPCRVLNGGCEDVCMIDAAGKI 2500
Query: 190 DCS--------NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
CS +G+ P ++ C+ +FSC +G CIP CD C+ DGSDE +
Sbjct: 2501 KCSCTQGVLASDGKRCVPDLSSRCSAEEFSCSVGGCIPFYLTCDKITHCI-DGSDEMASF 2559
Query: 242 --IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ----- 294
QC G C +++CIP + CD +C N D + +C NG
Sbjct: 2560 CDSRQCPKGFFLCT-NRRCIPESQYCDNIQNCGDGSDEQNCPCDPETKFRCNNGLCISNK 2618
Query: 295 --------------------------------VQCALSKKCIPHNWLCDEEMDC------ 316
+QC + C +W+CD E DC
Sbjct: 2619 MRCDNDPDCADASDEIGCPKVRNCSAMHSGEFLQCPNTTACYMASWVCDGENDCWDNSDE 2678
Query: 317 -------------------------------STDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+ DD +D T + C PN+
Sbjct: 2679 QNCTTSIVPTCPTDKFLCDNGHCIPQNWRCDNEDDCLDGTVTSLSSDEVNCTRHCKPNQF 2738
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG 405
+C +S++C+ S CD PDC++G DEG C + C P C
Sbjct: 2739 QCLNSSECIPNSWQCDNNPDCADGSDEGEHCQQRI------CPDWEFQCPGSGRCI---- 2788
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
P K C +C DG+ ++ C + +
Sbjct: 2789 --PKKWMCDGEVDCFSDGADEKNCDTVTIGW 2817
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 150/399 (37%), Gaps = 116/399 (29%)
Query: 49 KRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
K L LA+++ RN C + +L + +L S +L P LD
Sbjct: 3094 KSTLKNPDGLAIDWVARNLYWCDKSLDTIEISKLD-GRYRKILISENLQEPRAIVLDPFR 3152
Query: 107 ------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN----------------- 137
+ KAGM G N++ L+ ++ WP++L I +
Sbjct: 3153 RNMYWTDWGDQPYIGKAGMDGSNQTMLIKNHLGWPNALTISFETNELFWGDAREDFIAVS 3212
Query: 138 ------------------------------QDILYWCDSHLNTVE---SVRVDGSHNAV- 163
+D +YW D ++E R D N +
Sbjct: 3213 DLEGRNRKVIIYRDMHPSMNLHHVFAIAVWEDRIYWTDWETKSIEYCHKYRGDQCGNVIK 3272
Query: 164 -LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ P +LR + KP+ E P A C+ + + P+ +
Sbjct: 3273 TIHRPMDLR--------IFHPYRQKKPE------EDPCLRAGCS----TLCLLSPDPQGY 3314
Query: 223 KC---DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
KC D F+ +++ TCI C + Q C + KCIP+ W CD++ DC DN
Sbjct: 3315 KCACPDNFILGIDN-----KTCISNCSSAQFLCNTTFKCIPYYWKCDKQDDCG-----DN 3364
Query: 280 TDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNA 337
+DE D C +GQ QC + KCI + +CD D D++DE D D Y
Sbjct: 3365 SDEPDDCPEFACESGQFQCD-NNKCISPSSICD-----GIDQCGDSSDEKDCDDY----- 3413
Query: 338 VLCHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ K CD K DC NGEDE
Sbjct: 3414 -ECFNSQFKCSRSGNHSAFCLDGHKRCDAKLDCHNGEDE 3451
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 21/121 (17%)
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEE 313
++CI + +CD M+C +D TDED+ C + QC S++CIP W+CD
Sbjct: 939 QRCINRSLVCDGTMNC-----IDETDEDYANCANVTCVDNFFQCVTSRRCIPKAWVCDRH 993
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC D FS CH E C + C+ ++ CDG+ +C + DE
Sbjct: 994 PDCGPSD------------FSDEPPHCHKCGEFEC-KNGVCITFAQLCDGENNCGDNSDE 1040
Query: 373 G 373
Sbjct: 1041 A 1041
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQ---WPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
P + ++E + M G R LV ++ WPS LV+D Q LYWCDS +ESV +DG
Sbjct: 703 PDNAKIEWSWMDGNRRDTLVDGRLRPMIWPSGLVLDQIQKRLYWCDSRTGLIESVTLDGH 762
Query: 160 HNAVL 164
+L
Sbjct: 763 DRTLL 767
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
PL +++A G ++T +I+ P+++ +DY LYW D+ + +E DG +
Sbjct: 2353 PLSASIQRAYPSGYGLESIITTDIRMPNAITLDYQAKKLYWADARYDKIERADYDGRNRV 2412
Query: 163 VLCH 166
VL H
Sbjct: 2413 VLAH 2416
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGM-GKCIPE 220
V C + CG +C+ CD DC++G DE A +C QF C + KCIP
Sbjct: 24 VTCPRSHFTCGDG-KCIPQHWKCDTYADCADGSDEIDCDKAHQCKEEQFQCKLTNKCIPR 82
Query: 221 SWKCDGFVDC--------LEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
SW CDG DC ++ ++ + C C Q C+ + KC+ CD D
Sbjct: 83 SWTCDGDADCGVVEKFQTIDVSDEDADLCRSSKHCLPTQTVCS-NGKCLDIEKFCDGVWD 141
Query: 271 CSTDDIV--DNTDEDWDKFHQCF------NGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C+ D++ N + K F NG +C +K P+ LC++ +C + I
Sbjct: 142 CTNDELRCPKNNASECAKLQCSFDCRQTPNGP-KCFCAKGSQPNGSLCEDFDECQIEGIC 200
Query: 323 DNT 325
D T
Sbjct: 201 DQT 203
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 43 DWDKYFKRILNG--THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE 100
DW ++N ++ + FN NQ+ + + + IN ++
Sbjct: 3927 DWLTEHLYVINKKQSNIFVINFNGTNQTT--LTATGKHPIDIVVDPINRVM--------- 3975
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++ + E + +GM G + LV+ NI+W S L ID + LYW D +T+E+
Sbjct: 3976 VWSVMEAIILSGMDGYKKQKLVSANIEWASGLAIDQTTNRLYWADYRKSTIET 4028
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 59 ALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENR 118
ALE HRN+++C I+ + ++ R C ++++ ++W++P P++FP + +++
Sbjct: 275 ALEMYHRNRTICLIR--SATTTRFECYNVDNVTHTWEMPLPDLFPNIDSVDQV------- 325
Query: 119 SPLVTKNIQWPSS--LVIDYNQDILYWCDSHL 148
+I W S +D ++I++ C + +
Sbjct: 326 ------SIDWISGNWYFLDDQREIIFVCSASM 351
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E++ + G NR+ +V K I +P + +D YW D++L+++E V DG++ L
Sbjct: 389 VERSFLDGSNRTSIVLKKIVYPHGVALDLALQHTYWVDTYLDSIERVDYDGNNRWFL 445
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 26/174 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGE---------DEGPFCNA--ECTPGQFSCG 213
C + +C +N+C+ S CDG DC E ++ C + C P Q C
Sbjct: 66 CKEEQFQCKLTNKCIPRSWTCDGDADCGVVEKFQTIDVSDEDADLCRSSKHCLPTQTVCS 125
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------SKKCIP 260
GKC+ CDG DC D P +C ++QC+ +K P
Sbjct: 126 NGKCLDIEKFCDGVWDCTNDELRCPKNNASEC--AKLQCSFDCRQTPNGPKCFCAKGSQP 183
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+ LC++ +C + I D T ++ ++C + KC+ N +E M
Sbjct: 184 NGSLCEDFDECQIEGICDQTCKNLPGSYKCTCASGYARIDNKCLAINTPKEEPM 237
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---IVDNTDEDWD 45
HQC Q QC L+ KCIP +W CD + DC + +D +DED D
Sbjct: 64 HQCKEEQFQCKLTNKCIPRSWTCDGDADCGVVEKFQTIDVSDEDAD 109
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 16/83 (19%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
W+ AP RLE+ M GE+R+ + V + WP+ + +DY +YW D+ +++
Sbjct: 1402 WEEGAP-------RLERCTMAGEDRTTIKYVGSDGGWPNGITLDYVLKRVYWIDARSDSI 1454
Query: 152 ESVRVDG-------SHNAVLCHP 167
++ +G VL HP
Sbjct: 1455 HTINYNGLDHHLVIKDQEVLSHP 1477
>gi|156407458|ref|XP_001641561.1| predicted protein [Nematostella vectensis]
gi|156228700|gb|EDO49498.1| predicted protein [Nematostella vectensis]
Length = 629
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/322 (36%), Positives = 158/322 (49%), Gaps = 26/322 (8%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C + RC ++ QC CDG DC +G DE N CTP QFSC G+CIP
Sbjct: 83 ATNCSASMFRC-ANGQCKPRDWVCDGFDDCGDGSDEKGCANHSCTPAQFSCPSGRCIPLR 141
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W+CDG DC DG+DE C + Q C+ + +CI W CD + DC+ D +D
Sbjct: 142 WRCDGDGDC-SDGADERGCPPKNCTDSQFSCS-NGQCISLAWRCDGDHDCA-----DKSD 194
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E C + CA + CI W+CD E DC D +DE C
Sbjct: 195 ERNCTGKTCKPFEFACANGRHCIQRKWICDGENDCG-----DRSDE-----VDCGLESCG 244
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMC 400
+ RC ++++C+A S+ CDG+ DC + DEGP C ++ N C+ C P G C
Sbjct: 245 NDRWRCSNTSRCIAKSQVCDGRVDCPDASDEGPGCGLDQCHSNNGGCAQLCMDVPEGVQC 304
Query: 401 FCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C G + NKT C D +ECL SC Q C NT S+ C C +GY L PD + C A +
Sbjct: 305 SCRPGFTLASDNKT-CEDINECLNSSSCSQRCFNTRGSFSCKCVQGYRLEPDKRRCKAAD 363
Query: 458 VPQDEPASIIFSSTVDIRRIHL 479
+ + FS+ +IR++ L
Sbjct: 364 SIR---PFLYFSTRREIRKLGL 382
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 125/339 (36%), Gaps = 102/339 (30%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDG-SDEPNTCIH-QCFNGQVQCALSKKCIPHN 262
C+ G+F+C G CI WKCDG DC+++ DE C C + +C S+KCIP +
Sbjct: 1 CSAGKFTCKNGHCISLRWKCDGENDCVDNSDEDEYAGCAEWSCRASEFRCQASRKCIPLS 60
Query: 263 WLCDEEMDCSTDDIVDNTD---------------------EDW--DKF------------ 287
W CD + DC D+ D + DW D F
Sbjct: 61 WRCDGDYDCLAPDLSDEANCSVATNCSASMFRCANGQCKPRDWVCDGFDDCGDGSDEKGC 120
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCS-------------TD------------- 319
H C Q C S +CIP W CD + DCS TD
Sbjct: 121 ANHSCTPAQFSCP-SGRCIPLRWRCDGDGDCSDGADERGCPPKNCTDSQFSCSNGQCISL 179
Query: 320 --------DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
D D +DE + C P E C + C+ CDG+ DC + D
Sbjct: 180 AWRCDGDHDCADKSDER-----NCTGKTCKPFEFACANGRHCIQRKWICDGENDCGDRSD 234
Query: 372 EGPFCNNKADCENLKCSH---KCSPTPRGAMCFCPAGQNPNKTQCVDADE----CLID-- 422
E DC C + +CS T R C + + C DA + C +D
Sbjct: 235 E-------VDCGLESCGNDRWRCSNTSR---CIAKSQVCDGRVDCPDASDEGPGCGLDQC 284
Query: 423 ----GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
G C Q C + CSC G+TL D K+C +N
Sbjct: 285 HSNNGGCAQLCMDVPEGVQCSCRPGFTLASDNKTCEDIN 323
>gi|158300186|ref|XP_320185.4| AGAP012372-PA [Anopheles gambiae str. PEST]
gi|157013036|gb|EAA00393.5| AGAP012372-PA [Anopheles gambiae str. PEST]
Length = 4718
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/246 (40%), Positives = 133/246 (54%), Gaps = 20/246 (8%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKC 303
C Q C + KCIP W CD DCS D +DE DK H C G C +S +C
Sbjct: 5 CSQSQFTCVMDGKCIPALWRCDTSADCS-----DGSDEVGCDKAHACNEGMFHCTVSNRC 59
Query: 304 IPHNWLCDEEMDCS---TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
IPH+W CD ++DC D+VD +DED +H C P + C S +C+ + +FC
Sbjct: 60 IPHDWTCDGDVDCGLVEKYDMVDVSDEDPQLCRAHTK--CLPTQALC-SDGKCLEIDRFC 116
Query: 361 DGKPDCSNGE------DEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCV 414
DG DCSN E D + C+ LKCS+ C T GA CFC PN + C
Sbjct: 117 DGAWDCSNDELNCSSNDTATASAPTSACDALKCSYDCRLTSEGARCFCAKDSQPNGSVCE 176
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
D DEC I+G CDQ C N +Y CSCT GY + G +CTAVN+P+DEP S+ F++ +
Sbjct: 177 DFDECQIEGLCDQMCKNQPGAYQCSCTTGYVRQ--GNTCTAVNLPKDEPTSLFFTTFNKV 234
Query: 475 RRIHLN 480
+++ ++
Sbjct: 235 KKVSIS 240
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 154/373 (41%), Gaps = 71/373 (19%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGP-----FCNAECTPGQFSC-GMGKCIPESWKCDGF 227
++ +C+ S CD + DC++ G C C P QF C +CI SW+CDG
Sbjct: 2707 ANGRCIPQSWRCDDEDDCTDATGGGLSSDELACVKHCKPNQFKCTNTSECISNSWQCDGH 2766
Query: 228 VDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWD 285
DC DGSDE + C + C + QC + +CIP W+CD E+DC +T D D D
Sbjct: 2767 PDC-ADGSDEGDHCSRRDCPETEFQCPTTNRCIPQKWVCDGEVDCGATQD--DEMGCDEM 2823
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------------------------- 316
++C C + +CI +CD E DC
Sbjct: 2824 MVNECDKTSFTCK-NGECISLLHVCDGEQDCVDGSDEPLYCKEGDDGYDEEEGAGVDDHL 2882
Query: 317 ----------------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
DD D +DED + + P+ RC S C+
Sbjct: 2883 CVEPDHFRCNNGRCIERNLTCNVNDDCADGSDEDIRLCRNTTLICAGPDLFRC-ESGACI 2941
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN---KT 411
+ CDG DC + DE N+ + C+H+C P G C C G N K
Sbjct: 2942 TSNMLCDGANDCGDWSDEKSCQVNECEMIPDLCAHECEDRPVGYECVCRKGFRVNVNDKH 3001
Query: 412 QCVDADECLID--GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
CVD DEC C QTC NTH SY C+C +G+ LR D +C A P +IFS
Sbjct: 3002 LCVDVDECTEQQPRPCTQTCVNTHGSYHCTCLDGFVLR-DNDTCRAEG-RHILPPKLIFS 3059
Query: 470 STVDIRRIHLNGS 482
+ +R + L+G
Sbjct: 3060 NRYYLREVDLSGG 3072
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/355 (31%), Positives = 158/355 (44%), Gaps = 63/355 (17%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMG-KCIPESWKCDGFVDC-LE 232
+C++ S CDG DC + DE N C+ F C + +CIP +W CD +DC
Sbjct: 942 RCISRSHVCDGSVDCIDESDEDYINCPNKTCSEHFFQCEVSHRCIPNTWVCDRHLDCGPN 1001
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD--------------------EEMDCS 272
D SDEP C H+C + +C S C+P +LCD E CS
Sbjct: 1002 DSSDEPEHC-HKC--PEFECKNSA-CVPFEFLCDGVDNCGDKSDESQCDVDCGVNEFFCS 1057
Query: 273 TDDIVD------------NTDEDWDKFHQC-FNGQVQCALSKKCIPH-NWLCDEEMD--C 316
+D N + DK H+ NG Q ++ + P LC +++ C
Sbjct: 1058 PHGCIDRSLMCDPKLNCLNAFHECDKLHKAGSNGTTQSSVPVRSEPELKDLCRQDLRIVC 1117
Query: 317 STDDIVDNTDEDWDKY--------FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
D +E++++ F+ V HP+ L C +NQC+ +++ C+G+ DC +
Sbjct: 1118 GLDK---QCEENYNRVCQRMEFAPFNETMVCHHPDRL-CRVTNQCIKVTQLCNGRTDCPD 1173
Query: 369 GEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSC 425
G DEG C K D N CSH C P G +C CPA PN C C G+C
Sbjct: 1174 GTDEGFRCAEKLCDAPN-DCSHACHNAPEGLICSCPAHLFLQPNGRDCGHDHACDNWGTC 1232
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q CT Y C C EGYTL D +C + N D P +IFS+ +I + LN
Sbjct: 1233 SQICTKAGTHYRCGCVEGYTLMYDKFTCRSNN--GDSPY-VIFSNRQEILGVDLN 1284
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 145/359 (40%), Gaps = 64/359 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA----ECTPGQFSCGMGKC 217
A C +E RC S +C+ S CD + DC+NGEDE C C P F C KC
Sbjct: 3530 ATTCPEHEFRC-SEGRCIPQSWLCDDEKDCANGEDETENCQKPEAITCEPTSFRCNNSKC 3588
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST---- 273
IP W+CD DC D SDE N + C + +C CI CD E +C+
Sbjct: 3589 IPGRWRCDFENDC-GDNSDELNCELRNCSESEFRCR-DGHCIRGIRRCDNEFNCADHSDE 3646
Query: 274 ------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D +D +DE+ +C G+ +C + KC
Sbjct: 3647 ENCNVTCSAEQFKCKSHPACISNKFKCDGDNDCIDESDEE---DCECQEGEYRCN-NGKC 3702
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I +W+CD DD +DN+DE + H C+ RC + N C+ S CD K
Sbjct: 3703 ILSSWVCD-----GIDDCLDNSDEMGEYCKEHG---CNKRAFRCANRN-CIRKSLMCDNK 3753
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG 423
DC + DE +K + +C+ C Q P+ D C+ G
Sbjct: 3754 DDCGDNSDEKSALCHKCPPNSFRCNSDSKCIDIALRC----DQTPHCLDESDEIGCIKTG 3809
Query: 424 ----SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
+C Q C Y C C EGY G++ T V V DE ++ +S D R ++
Sbjct: 3810 CGFGACSQLCIEKKGHYTCRCAEGYVKGGPGRNATCVAV--DEQGILLVASESDFRSLY 3866
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSC 212
+ DG A C +C ++ +C+ CD + DC +G DE P C C GQF C
Sbjct: 3355 LTADGKSCAANCSAAHFQCRTTFKCIPFYWRCDKQDDCGDGSDEPPNCPTFTCEAGQFQC 3414
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK------CIPHNWLCD 266
+CI S CDG VD D SDE + +CF+ +C S CI CD
Sbjct: 3415 LNKRCINPSQICDG-VDQCGDLSDERDCDRFECFSSHFKCGPSAAKNTSGFCIEGARRCD 3473
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
EE++C + DE + C Q +CA +CI W+CD DC D +D
Sbjct: 3474 EEVNCPNGE-----DEQNCEPKNCTATQFRCANGGRCIDRTWVCDNVPDCH-----DGSD 3523
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
E A C +E RC S +C+ S CD + DC+NGEDE C
Sbjct: 3524 EQ----VCGPATTCPEHEFRC-SEGRCIPQSWLCDDEKDCANGEDETENC 3568
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 107/214 (50%), Gaps = 20/214 (9%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
RC ++ +C+ ++ C+ +C +G DE G CN F C G+CI +S +CD
Sbjct: 2585 FRCNNA-RCIPKNQQCNHIQNCGDGSDEVGCSCN---NATHFRCTDGQCIVKSMRCDYEP 2640
Query: 229 DCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
DC +D SDE + C G V CA + C W CD E DC DN+DE
Sbjct: 2641 DC-KDVSDEIGCPVMRNCTEGFVNCANTTGCYMPTWRCDGENDC-----WDNSDEQDCPT 2694
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
C + CA + +CIP +W CD+E DC TD D H C PN+
Sbjct: 2695 AIPTCPEDKFLCA-NGRCIPQSWRCDDEDDC-TDATGGGLSSDELACVKH----CKPNQF 2748
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+C ++++C++ S CDG PDC++G DEG C+ +
Sbjct: 2749 KCTNTSECISNSWQCDGHPDCADGSDEGDHCSRR 2782
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 103/229 (44%), Gaps = 26/229 (11%)
Query: 151 VESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG- 208
V V D H+ C+ C + C+ + CDG DC +G DE + C P
Sbjct: 871 VACVPFDLQHSLASCNNSTHFLCRNKIDCIEIKYTCDGDRDCEDGSDEETTPDGPCDPNC 930
Query: 209 ----QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNW 263
F C +CI S CDG VDC+++ ++ C ++ C QC +S +CIP+ W
Sbjct: 931 DLERNFKCDEQRCISRSHVCDGSVDCIDESDEDYINCPNKTCSEHFFQCEVSHRCIPNTW 990
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+CD +DC +D D + H+C + +C S C+P +LCD D+ D
Sbjct: 991 VCDRHLDCGPNDSSDEPEH----CHKC--PEFECKNS-ACVPFEFLCD-----GVDNCGD 1038
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE S V C NE C S + C+ S CD K +C N E
Sbjct: 1039 KSDE------SQCDVDCGVNEFFC-SPHGCIDRSLMCDPKLNCLNAFHE 1080
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 10/76 (13%)
Query: 92 NSWDLPAPEIFPLDERLEKAGMHGENRSPLVT---KNIQWPSSLVIDYNQDILYWCDSHL 148
+SW +P+ R+++A M+G LV+ + I+WP+ L ID Q LYWCD+ L
Sbjct: 697 SSWSVPS-------GRIDRAWMNGTQPELLVSSKERPIEWPTGLSIDMIQKRLYWCDARL 749
Query: 149 NTVESVRVDGSHNAVL 164
+ +ES+ +DGS+ +L
Sbjct: 750 SFIESINLDGSNRVLL 765
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 121/333 (36%), Gaps = 77/333 (23%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+ ++ D RL E + G NR L Q + + ++ +LY+ D+
Sbjct: 734 SIDMIQKRLYWCDARLSFIESINLDGSNRVLLFDGRSQNQFPVALAVHRQLLYFADNVKG 793
Query: 150 TVESVRVDGSH---NAVLCHPNELR-------------------------CGSSNQCVAL 181
+E + + H + P L C ++ VA
Sbjct: 794 HIEKLNLSDPHLLETITIEKPQVLGLKIFDNLTQYGGNGRNACEIDCPGICLNTPVAVAS 853
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC--------------IPESWKCDGF 227
K DG+ + E + C P + C I + CDG
Sbjct: 854 CKCEDGQVLSLSSEGK----PVACVPFDLQHSLASCNNSTHFLCRNKIDCIEIKYTCDGD 909
Query: 228 VDCLEDGSDEPNTCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DC EDGSDE T C +C ++CI + +CD +DC +D +DE
Sbjct: 910 RDC-EDGSDEETTPDGPCDPNCDLERNFKCD-EQRCISRSHVCDGSVDC-----IDESDE 962
Query: 283 DWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D+ C QC +S +CIP+ W+CD +DC +D D + C
Sbjct: 963 DYINCPNKTCSEHFFQCEVSHRCIPNTWVCDRHLDCGPNDSSDEPEH------------C 1010
Query: 341 HP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H E C +S CV CDG +C + DE
Sbjct: 1011 HKCPEFECKNS-ACVPFEFLCDGVDNCGDKSDE 1042
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 13/126 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMG-KCIPE 220
V C ++ C +C+ CD DCS+G DE A C G F C + +CIP
Sbjct: 3 VTCSQSQFTCVMDGKCIPALWRCDTSADCSDGSDEVGCDKAHACNEGMFHCTVSNRCIPH 62
Query: 221 SWKCDGFVDC-------LEDGSDE-PNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMD 270
W CDG VDC + D SDE P C +C Q C+ KC+ + CD D
Sbjct: 63 DWTCDGDVDCGLVEKYDMVDVSDEDPQLCRAHTKCLPTQALCS-DGKCLEIDRFCDGAWD 121
Query: 271 CSTDDI 276
CS D++
Sbjct: 122 CSNDEL 127
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 112/299 (37%), Gaps = 57/299 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+++A G ++T +IQ P++L +DY LYW D+ L+ VE DG H VL
Sbjct: 2373 IQRAYPSGYGLESIITSDIQMPNALTLDYQARKLYWADALLDKVERTDYDGKHRVVLAHS 2432
Query: 166 ---HPNELRCG---------SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
HP L + + + +K+ + P C
Sbjct: 2433 TPKHPFALAVFGDLLFWTDLTVHAVIRANKYSGSDIVLLRRDIAQPMGIVAVQQIDKECS 2492
Query: 214 MGKCIPESWKCD--------GFVDC-------LEDGSDEPNTCIHQCFNGQVQCALSKKC 258
C + C+ G V+C DG + C + + C + C
Sbjct: 2493 ADPCQVMNGFCEDVCLIDAAGKVECHCTQGVLAADGQRCIPKSVSNCSSSEFSCT-NGNC 2551
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
IP + CD +C +D +DE + C +G +C + +CIP N C+ +C
Sbjct: 2552 IPFHLTCDGVKNC-----LDGSDELVTFCAHRPCPDGFFRCN-NARCIPKNQQCNHIQNC 2605
Query: 317 STDDIVDNTDEDWDKYFSHNAVLC---HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE V C + RC + QC+ S CD +PDC + DE
Sbjct: 2606 G-----DGSDE----------VGCSCNNATHFRC-TDGQCIVKSMRCDYEPDCKDVSDE 2648
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 109/294 (37%), Gaps = 68/294 (23%)
Query: 11 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF-------- 62
QC +S +CIP+ W+CD +DC +D D E K + + + EF
Sbjct: 978 QCEVSHRCIPNTWVCDRHLDCGPNDSSDEP-EHCHKCPEFECKNSACVPFEFLCDGVDNC 1036
Query: 63 -NHRNQSLC---------FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
+ ++S C F L C + LN+ F ++L KAG
Sbjct: 1037 GDKSDESQCDVDCGVNEFFCSPHGCIDRSLMCDPKLNCLNA--------FHECDKLHKAG 1088
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILY------WCDSHLNTV-ESVRVDGSHNAVLC 165
+G +S + ++ L QD+ C+ + N V + + + ++C
Sbjct: 1089 SNGTTQSSVPVRSEPELKDLC---RQDLRIVCGLDKQCEENYNRVCQRMEFAPFNETMVC 1145
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
H + C +NQC+ +++ C+G+ DC +G DEG F C C
Sbjct: 1146 HHPDRLCRVTNQCIKVTQLCNGRTDCPDGTDEG-----------FRCAEKLC-------- 1186
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
D PN C H C N L C H +L DC D DN
Sbjct: 1187 ----------DAPNDCSHACHNAPE--GLICSCPAHLFLQPNGRDCGHDHACDN 1228
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
D +E++ + G NR+ +V I P + +D +YW D+HL+TV+ V DGS
Sbjct: 383 DVSIERSLLDGTNRTSIVLNKIITPLDIALDLVMQHVYWVDTHLDTVQRVNYDGS 437
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----- 106
L LA+++ RN C + +L L+N +L P LD
Sbjct: 3128 LKNPEGLAVDWVGRNLYWCDKGLDTIEVSKLDGRYRRVLINK-ELQKPRAIALDPYRRYM 3186
Query: 107 ---------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ +AGM G N++ L+ + + WP++L I + + L+W D+ + + +D
Sbjct: 3187 YWTDWGDQPHIGRAGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDAREDYIAVSDLD 3246
Query: 158 GSHNAVL 164
G + +L
Sbjct: 3247 GQNVRIL 3253
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++ + E + +GM G + LV N++W S L ID LYW D +T+E+
Sbjct: 4023 VWSIMETIISSGMDGRGKQKLVHTNVEWASGLAIDTTTKRLYWADYRKSTIET 4075
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 107 RLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN--- 161
RLE+ M GENR+ + V + WP+ + +DY +YW D+ +++ ++ DG +
Sbjct: 1412 RLERCTMAGENRTVIKYVGSDGGWPNGIALDYIPRRVYWIDARSDSIHTITYDGQDHHLV 1471
Query: 162 ----AVLCHP 167
VL HP
Sbjct: 1472 IKDQGVLAHP 1481
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS---TDDIVDNTDED 43
H C G C +S +CIPH+W CD ++DC D+VD +DED
Sbjct: 44 HACNEGMFHCTVSNRCIPHDWTCDGDVDCGLVEKYDMVDVSDED 87
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ ++G + N++ P L +D+ LYWCD L+T+E ++DG + VL
Sbjct: 3108 KRMCESGEENRPVEVIHRTNLKNPEGLAVDWVGRNLYWCDKGLDTIEVSKLDGRYRRVL 3166
>gi|297471646|ref|XP_002685354.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Bos
taurus]
gi|296490675|tpg|DAA32788.1| TPA: low-density lipoprotein receptor-related protein 2-like [Bos
taurus]
Length = 4680
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 173/362 (47%), Gaps = 61/362 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
CH N+ C + C+ S CDG+ DC++G DE C C+ QF+C G+CIP ++
Sbjct: 102 CHSNQFLCPNEQLCIPESWVCDGEDDCNDGADERRHCPGITCSSRQFTCENGECIPGEFR 161
Query: 224 CDGFVDCLEDGSDEPN------------------------------------TCIHQCFN 247
CD DCL DG+DE N C H+C
Sbjct: 162 CDHSTDCL-DGTDEKNCRYPVCEQLTCADGACYNTSQRCNGQVDCRDASDERNCTHRCTR 220
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPH 306
+ QC S +CIP ++CD E+DC D +DE + C + C + CI
Sbjct: 221 TEFQCG-SGQCIPRTYVCDHEIDCE-----DGSDEHSCPAYRTCKGNEFTCP-NGVCIAQ 273
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+W+CD E DC VDN DED + + C+PNE C S +C+ +SK CDG DC
Sbjct: 274 SWVCDGESDC-----VDNADEDGCESKINRTFECYPNEWACPKSGKCIPISKVCDGTLDC 328
Query: 367 SNGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT-QCVDADEC 419
GEDE + C +L C ++C +P G MC+CP+G N N+T CVD D+C
Sbjct: 329 PGGEDESNITAGQQCDVNLCPSLGCEYQCHRSPGGGMCYCPSGFIVNQNRTNNCVDFDDC 388
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
I G CDQ C + + C+C EGY L K C A N E A +IFS+ ++ + +
Sbjct: 389 QIWGVCDQLCEDRIGHHRCNCVEGYVLERQ-KHCRA-NSSFGE-AFVIFSNGRNLLKGSI 445
Query: 480 NG 481
G
Sbjct: 446 RG 447
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/301 (37%), Positives = 141/301 (46%), Gaps = 27/301 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C P + C ++C+AL+ CDG DC++G DE C CT QF+C G+CI ++++
Sbjct: 1185 CSPTQFHC-PDHRCIALTFVCDGTKDCADGSDE-IGCVINCTASQFTCVSNGQCISKTYR 1242
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP W CD DC + +
Sbjct: 1243 CDGVFDC-DDHSDETDCPTRPPGMCHQDEFQCQEDGICIPKTWECDGHEDC-----LQGS 1296
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C C + CI NWLCD + DC D +DE K
Sbjct: 1297 DEHNGCPPKTCHPSHFVCQ-NGNCIYRNWLCDGDNDCG-----DMSDE---KDCPTQPFQ 1347
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGA 398
C + +C + CV LS CDG DC G DE P CN N N C+H+C P GA
Sbjct: 1348 CPSWQWQCPGHSICVNLSAVCDGVSDCPGGTDESPLCNQNSCSDSNGGCTHQCIQGPYGA 1407
Query: 399 MCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C CP G N +KT C D DEC G C Q C N S+ C C YTL D ++C A
Sbjct: 1408 QCQCPLGYLLGNDSKT-CEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYTLDADRRTCKA 1466
Query: 456 V 456
Sbjct: 1467 T 1467
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 159/345 (46%), Gaps = 39/345 (11%)
Query: 157 DGSHNAVLCHPNELRCGS------SNQCVALSKFCDGKPDCSN--GEDEGPFC-NAECTP 207
DGS C ++ C S +N+C+ + CDG DC + EDE C N C+
Sbjct: 2920 DGSDEPPTCEFSQSTCASDYFKCDNNRCIPMMWVCDGDNDCGDMSDEDERHNCKNRNCSS 2979
Query: 208 GQFSCGMG-----KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+F+C +G CIP+SW CDG DCL+ + N CF + C + CIP++
Sbjct: 2980 SEFACEVGVRPHRGCIPKSWVCDGEADCLDALDEHQNCTRRSCFGTEFVCN-NGLCIPNH 3038
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ CD DC D +DE + C C + CI ++CD + DC
Sbjct: 3039 FRCDRNNDCG-----DYSDERGCVYPTCDETLFTCQ-NGLCINKAYVCDGDNDCK----- 3087
Query: 323 DNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DN+DE ++ H C P++ RC + N C+ + K C+ PDCS+ DE N+ +
Sbjct: 3088 DNSDEL--EHLCHTPETTCPPHQFRCDNGN-CIEMMKVCNNFPDCSDNSDEKGCGINECN 3144
Query: 382 CENLK-CSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYV 437
L C+ C+ T C C G +K CVD DEC C Q C N +Y+
Sbjct: 3145 DPTLSGCNQNCTDTLTSFYCSCNPGYKLLSDKRTCVDIDECEETPFVCSQKCENLPGTYI 3204
Query: 438 CSCTEGYTLRPDGKSCTA-VNVPQDEPASIIFSSTVDIRRIHLNG 481
C C GY PDGK+C N+ D +IFS+ +R + + G
Sbjct: 3205 CKCAPGYIREPDGKTCRQNSNIEPD----LIFSNRYYLRNLTVYG 3245
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 151/336 (44%), Gaps = 44/336 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC C+ CD DC + DE C PG F C G CI E KC
Sbjct: 3789 CTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDCEMMTCRPGYFQCDSGHCISEHMKC 3847
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
+G DC D SDE N C + NG A +C H +W CD + DC D
Sbjct: 3848 NGVADC-RDASDEAN-CPTRFPNGAYCPATMFECKNHVCIHSSWKCDGDNDCG-----DG 3900
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ H C N + +C + +CI + +C++E DC D +DE +
Sbjct: 3901 SDEE---LHLCLNVACDSPYRFRCD-NNRCIYRHEVCNQEDDCG-----DGSDEKKELCV 3951
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD---CENLKCSHK 390
C P+E +C S+ +C+ + CD DC + DE CN D ENL C H
Sbjct: 3952 EPTPRPCTPDEFKC-SNGRCIPQHRVCDHVNDCGDNFDETG-CNTGKDRSCAENL-CEHN 4008
Query: 391 CSPTPRGA-MCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C+ G +C C G PN + C D +EC+ GSC Q C NT SY CSC EG+T
Sbjct: 4009 CTQLREGGFICSCRPGFKPNSIDRNLCEDINECMQFGSCPQICHNTKGSYECSCAEGFTS 4068
Query: 447 RPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D G+ C A P ++ V IR+ +L+
Sbjct: 4069 LSDRYGERCAA----DGSPPLLLLPENVRIRKYNLS 4100
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 147/350 (42%), Gaps = 62/350 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
CH ++C +S C+ S CDG DC + DE P FC C +F C G CIP W
Sbjct: 2851 CHTGYVKCTNSTICIPRSFLCDGDNDCGDMSDENPLFCATRSCGSDEFHCTSGPCIPARW 2910
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC C + +C + +CIP W+CD + DC D+ D
Sbjct: 2911 YCDHEKDC-SDGSDEPPTCEFSQSTCASDYFKCD-NNRCIPMMWVCDGDNDCG--DMSDE 2966
Query: 280 TDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDED------- 328
+ K C + + C + + CIP +W+CD E DC +D DE
Sbjct: 2967 DERHNCKNRNCSSSEFACEVGVRPHRGCIPKSWVCDGEADC-----LDALDEHQNCTRRS 3021
Query: 329 -WDKYFSHNAVLCHPNELRCGSSNQC--------------------------VALSKFCD 361
+ F N LC PN RC +N C + + CD
Sbjct: 3022 CFGTEFVCNNGLCIPNHFRCDRNNDCGDYSDERGCVYPTCDETLFTCQNGLCINKAYVCD 3081
Query: 362 GKPDCSNGEDEGP-FCNNKADC---ENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDA 416
G DC + DE C+ +C + C + F N ++ C
Sbjct: 3082 GDNDCKDNSDELEHLCHTPETTCPPHQFRCDNGNCIEMMKVCNNFPDCSDNSDEKGC-GI 3140
Query: 417 DEC---LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+EC + G C+Q CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3141 NECNDPTLSG-CNQNCTDTLTSFYCSCNPGYKLLSDKRTCVDIDECEETP 3189
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV S CD DC + DE C +F+C G+CIP CDG +CL++
Sbjct: 2779 ANGRCVPYSDRCDHYNDCGDNSDEAGCHFRACNRTEFTCSNGRCIPSELVCDGVDNCLDN 2838
Query: 234 -GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQC 290
SDE N C G V+C S CIP ++LCD + DC D +DE+ + C
Sbjct: 2839 SASDEKNCPERTCHTGYVKCTNSTICIPRSFLCDGDNDCG-----DMSDENPLFCATRSC 2893
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ + C S CIP W CD E DCS D +DE FS + C + +C +
Sbjct: 2894 GSDEFHCT-SGPCIPARWYCDHEKDCS-----DGSDEPPTCEFSQST--CASDYFKC-DN 2944
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
N+C+ + CDG DC + DE + + +C+N CS
Sbjct: 2945 NRCIPMMWVCDGDNDCGDMSDE----DERHNCKNRNCS 2978
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLED 233
+CV L CDG DC + DE NA C+P F C G CIP W+CDG DCL D
Sbjct: 1072 RCVPLQYRCDGFDDCLDNSDEAQCTTSNATCSPLAFECKREGHCIPSMWRCDGEDDCL-D 1130
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ- 289
GSDE P C Q C + CIP +W+CD + DC D +DE + Q
Sbjct: 1131 GSDEQNCPTRAPTSCRADQFTCD-NNFCIPRSWVCDTDNDCK-----DGSDEKSCNYTQT 1184
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C +CI ++CD DC+ D +DE + C ++ C S
Sbjct: 1185 CSPTQFHCP-DHRCIALTFVCDGTKDCA-----DGSDE------IGCVINCTASQFTCVS 1232
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ + CDG DC + DE
Sbjct: 1233 NGQCISKTYRCDGVFDCDDHSDE 1255
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C FSC G+C+P ++CDGF DCL D SDE T C +C CIP
Sbjct: 1060 QCGTLSFSCHNGRCVPLQYRCDGFDDCL-DNSDEAQCTTSNATCSPLAFECKREGHCIPS 1118
Query: 262 NWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD E DC +D +DE C Q C + CIP +W+CD + DC
Sbjct: 1119 MWRCDGEDDC-----LDGSDEQNCPTRAPTSCRADQFTCD-NNFCIPRSWVCDTDNDCK- 1171
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE Y C P + C ++C+AL+ CDG DC++G DE
Sbjct: 1172 ----DGSDEKSCNY----TQTCSPTQFHC-PDHRCIALTFVCDGTKDCADGSDE 1216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 133/349 (38%), Gaps = 89/349 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL----------------------- 141
+ ++E A M G +R LV + + WP+ L +DY Q+++
Sbjct: 2560 NAKIEMATMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVI 2619
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGSSNQC 178
YW D + +VDGS + P +R +Q
Sbjct: 2620 VSRANSPFGLAIYGQYVYWTDLLTQKIYRANKVDGSGQTAVTVTLPFRPKGIRAVVKDQQ 2679
Query: 179 VALSKFCDGKPDCSNGEDEGP--------------------FC----NAECTPGQFSCGM 214
LS CS+ GP +C C +F+C
Sbjct: 2680 QCLSPCDRFNGGCSHICAPGPNGAECQCPHEGRWYLANNNKYCIQDNGTRCDSSKFTCLS 2739
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKCIP+ +C+ DC D SDE T H C + CA + +C+P++ CD DC
Sbjct: 2740 GKCIPDQLQCNDIDDC-GDSSDELETLCAFHSCPSTSFTCA-NGRCVPYSDRCDHYNDCG 2797
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE F C + C+ + +CIP +CD D+ +DN+ D
Sbjct: 2798 -----DNSDEAGCHFRACNRTEFTCS-NGRCIPSELVCD-----GVDNCLDNSASDEKNC 2846
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
CH ++C +S C+ S CDG DC + DE P FC ++
Sbjct: 2847 PERT---CHTGYVKCTNSTICIPRSFLCDGDNDCGDMSDENPLFCATRS 2892
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 110/275 (40%), Gaps = 82/275 (29%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G +S +++ I WP+ L IDY D+LYW D+H
Sbjct: 3375 IGRVGMDGTLKSLIISTKIMWPNGLTIDYTNDLLYWADAHLGYIEFSDLEGRHRHTVYET 3434
Query: 148 ----------------------LNTVESV-RVDGSHNAVLC----HPNELR--------- 171
TVE + +GS L P ++R
Sbjct: 3435 GTLSHPFAITIFEDTIYWTDWNTKTVEKGNKYNGSDRVALLNVTHRPYDIRVYHPYRQPI 3494
Query: 172 ----CGSSN-QCVALSKFCDGK-------PDCSNGEDEGP--FCNAECTPGQFSCGMGK- 216
CG++N C L +G PD GP C C+ QF C +
Sbjct: 3495 VPNPCGTNNGGCSHLCLIKEGGVGFTCECPDNFYTVQRGPNTQCLPMCSSTQFLCADSEM 3554
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP WKCDG DCL DGSDEP TC + C G QC C + LC+ DC
Sbjct: 3555 CIPIWWKCDGRRDCL-DGSDEPITCPQRFCALGMFQCN-DGNCTNSHSLCNLRQDCP--- 3609
Query: 276 IVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNW 308
D +DED + HQC + QCA +K+CIP +W
Sbjct: 3610 --DGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESW 3641
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 43/229 (18%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C +F C G CI SW+CDG DC +G+DE + C + Q C + CIP +W+
Sbjct: 63 CRSNEFLCQPGLCITASWRCDGTRDC-PNGADEIDCPTSSCHSNQFLCPNEQLCIPESWV 121
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
CD E DC+ D DE + H C + Q C + +CIP + CD DC
Sbjct: 122 CDGEDDCN-----DGADE---RRHCPGITCSSRQFTCE-NGECIPGEFRCDHSTDC---- 168
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+D TDE +Y + C + C S+ C+G+ DC + DE
Sbjct: 169 -LDGTDEKNCRYPVCEQLTC--------ADGACYNTSQRCNGQVDCRDASDE-------- 211
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTC 429
C+H+C+ T C +GQ +T D + DGS + +C
Sbjct: 212 ----RNCTHRCTRTEFQ----CGSGQCIPRTYVCDHEIDCEDGSDEHSC 252
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C S C+ + CDG+ DC +G DE C C G F C G C
Sbjct: 3541 MCSSTQFLCADSEMCIPIWWKCDGRRDCLDGSDEPITCPQRFCALGMFQCNDGNCTNSHS 3600
Query: 223 KCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE P C HQC + QCA +K+CIP +W CD + DC + D++
Sbjct: 3601 LCNLRQDC-PDGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESWQCDMQDDCDDNSDEDSS 3658
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C G +CA + CIP W CD + DC D +DE + +
Sbjct: 3659 HC---ASRTCRPGYFKCA-NGHCIPQIWKCDVDNDCG-----DYSDEPLQECLGPSYRCD 3709
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHKC 391
+ E C ++ +C+ C+G DC + DE DCE++ C +H+C
Sbjct: 3710 NYTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE-------QDCESMTCKPSGEFRCTNHRC 3762
Query: 392 SP 393
P
Sbjct: 3763 IP 3764
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 118/283 (41%), Gaps = 55/283 (19%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCI---HQCFN-GQVQCALSKKCI 259
C PG F C G CIP+ WKCD DC D SDEP C+ ++C N + C + +CI
Sbjct: 3665 CRPGYFKCANGHCIPQIWKCDVDNDC-GDYSDEPLQECLGPSYRCDNYTEFSCKTNYRCI 3723
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCST 318
P +C+ DD DN+DE + C +G+ +C + +CIP W CD + DC
Sbjct: 3724 PKWAVCN-----GVDDCRDNSDEQDCESMTCKPSGEFRCT-NHRCIPLRWRCDGQNDCG- 3776
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------ 372
D +DE+ + C +E RC C+ CD DC + DE
Sbjct: 3777 ----DRSDEE-----NCAPRKCTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDCEMM 3826
Query: 373 ----GPF-------------CNNKADCENLKCSHKCSPT--PRGAMCFCPAGQNPNKTQ- 412
G F CN ADC + C PT P GA +CPA K
Sbjct: 3827 TCRPGYFQCDSGHCISEHMKCNGVADCRDASDEANC-PTRFPNGA--YCPATMFECKNHV 3883
Query: 413 CVDAD-ECLIDGSC-DQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
C+ + +C D C D + HL +C Y R D C
Sbjct: 3884 CIHSSWKCDGDNDCGDGSDEELHLCLNVACDSPYRFRCDNNRC 3926
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 32/231 (13%)
Query: 156 VDGSHNAV-----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG 208
+DGS + C +C N C C+ + DC +G DE P + +C P
Sbjct: 3569 LDGSDEPITCPQRFCALGMFQCNDGN-CTNSHSLCNLRQDCPDGSDEDPVLCEHHQCEPY 3627
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
++ C +CIPESW+CD DC ++ ++ + C + C G +CA + CIP W CD
Sbjct: 3628 EWQCANKRCIPESWQCDMQDDCDDNSDEDSSHCASRTCRPGYFKCA-NGHCIPQIWKCDV 3686
Query: 268 EMDCSTDDIVDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE + ++C N + C + +CIP +C+ DD
Sbjct: 3687 DNDCG-----DYSDEPLQECLGPSYRCDNYTEFSCKTNYRCIPKWAVCN-----GVDDCR 3736
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ C P+ E RC ++++C+ L CDG+ DC + DE
Sbjct: 3737 DNSDEQ-----DCESMTCKPSGEFRC-TNHRCIPLRWRCDGQNDCGDRSDE 3781
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 136 YNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
Y D ++ CD H + + R G +CH +E +C C+ + CDG DC G
Sbjct: 1241 YRCDGVFDCDDHSDETDCPTRPPG-----MCHQDEFQCQEDGICIPKTWECDGHEDCLQG 1295
Query: 195 EDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQ 251
DE C + C P F C G CI +W CDG DC D SDE + T QC + Q Q
Sbjct: 1296 SDEHNGCPPKTCHPSHFVCQNGNCIYRNWLCDGDNDC-GDMSDEKDCPTQPFQCPSWQWQ 1354
Query: 252 CALSKKCIPHNWLCDEEMDC 271
C C+ + +CD DC
Sbjct: 1355 CPGHSICVNLSAVCDGVSDC 1374
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+A M G NR LVT + WP + +D +YW DS + +E+V DG + H
Sbjct: 573 RIERAYMDGSNRKDLVTTKLGWPGGITLDLVSKRVYWVDSRFDYIETVTYDGLKRMTVIH 632
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M G+ R LV +++ WP+ L IDY N D +YW D N VE+++ DG+ ++
Sbjct: 4239 KIESAWMDGQRRKVLVQEDLGWPTGLCIDYMNGDRIYWSDLKDNIVETIKYDGTDRRIV 4297
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V + I WP+ L +DY +LY+ D +L+ ++ DGS+
Sbjct: 1613 RIERASMDGSQRTIIVQEKIYWPNGLALDYPNRLLYFMDGYLDYLDFCHYDGSNRRQVIA 1672
Query: 161 -NAVLCHPNEL 170
+ +L HP +
Sbjct: 1673 SDLILRHPYSI 1683
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A +G ++ ++ + S+ +D+ LYW D L T++ ++DGSH VL
Sbjct: 1524 KIWSAFQNGTDKKLILDSGVSMTGSIAVDWIGRNLYWTDISLRTIDVAKLDGSHKTVLIS 1583
Query: 167 PNELRCGS 174
N G
Sbjct: 1584 ENITNLGG 1591
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVES--VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD 186
P S V D D L D H N + N LC PN RC +N
Sbjct: 2996 PKSWVCDGEADCLDALDEHQNCTRRSCFGTEFVCNNGLCIPNHFRCDRNN---------- 3045
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
DC + DE C F+C G CI +++ CDG DC +D SDE H C
Sbjct: 3046 ---DCGDYSDERGCVYPTCDETLFTCQNGLCINKAYVCDGDNDC-KDNSDELE---HLCH 3098
Query: 247 NGQVQCALSKKCIPHNWLCD 266
+ C PH + CD
Sbjct: 3099 TPETTCP------PHQFRCD 3112
>gi|170035892|ref|XP_001845800.1| very low-density lipoprotein receptor [Culex quinquefasciatus]
gi|167878399|gb|EDS41782.1| very low-density lipoprotein receptor [Culex quinquefasciatus]
Length = 4695
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 130/230 (56%), Gaps = 12/230 (5%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
KCIP +W CD DC+ D +DE D DK H+C + Q QC L+ KCIP W CD + D
Sbjct: 77 KCIPQHWKCDTYSDCA-----DGSDEIDCDKTHKCKDEQFQCKLTNKCIPRGWTCDGDAD 131
Query: 316 CSTDDIVDNTD-EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + D D D ++ C P + C S+ +C+ + +FCDG DCSN E P
Sbjct: 132 CGVVEKFRTIDVSDEDAELCRSSRHCLPTQTVC-SNGKCLDIDRFCDGVWDCSNDELRCP 190
Query: 375 F-CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
A+C+ LKCS+ C TP G CFC G PN + C D DEC IDG CDQ C N
Sbjct: 191 KNTTTVAECDALKCSYDCRQTPNGPRCFCAKGSQPNGSICEDFDECQIDGMCDQICKNLP 250
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH-LNGS 482
+Y C+C GY G C AVN P++EPAS++F+++ +IR+ +NGS
Sbjct: 251 GTYKCTCATGYARI--GNQCRAVNTPKEEPASLLFATSTEIRKFPVINGS 298
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 164/348 (47%), Gaps = 35/348 (10%)
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG- 208
T+ S+ D + C PN+ +C +S +C+ S CD PDC++G DEG C P
Sbjct: 2758 TITSLSSDEINCTRHCKPNQFQCLNSTECIPNSWQCDNNPDCADGSDEGEHCQQRVCPEW 2817
Query: 209 QFSCGM-GKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLC 265
+F C G+CI W+CDG VDC +D DE N + C C + C+ + C
Sbjct: 2818 EFHCPTSGRCITMKWRCDGEVDCTDDQEDEKNCDSMEQSCDPDSFTCE-NGDCVSRQFYC 2876
Query: 266 DEEMDCSTDDIVDNTDEDWD------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
D + DC VD +DE D C + QC +KKCI N C+ DC
Sbjct: 2877 DGDADC-----VDGSDEPIDCVPEVGVVVSCKVDEFQCK-NKKCIAKNLTCNVNNDCE-- 2928
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
D +DED + + P RC S C+ CDG DC + DE N
Sbjct: 2929 ---DGSDEDIQLCKNTTLICAGPELFRC-ESGVCIVRGLLCDGSNDCGDWSDEKSCKIN- 2983
Query: 380 ADCENLK--CSHKCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHL 434
+CE + C+H C G C C G N K +C D DECL D C Q CTN +
Sbjct: 2984 -ECEEMPNLCAHNCEDREVGYDCTCRPGFKVNINDKHRCDDVDECL-DRPCSQMCTNVYG 3041
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY CSC EGYT++ +G SC A ++ E +IFS+ +R + +NGS
Sbjct: 3042 SYHCSCQEGYTMKANG-SCKADSL---EHPKLIFSNRYYVREVDMNGS 3085
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/335 (31%), Positives = 154/335 (45%), Gaps = 41/335 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C N +C +S +C+ S CD PDC N + P +C +F C G C
Sbjct: 1012 CIDNFFQCNTSRRCIPKSWVCDRHPDCGPNDHSDEPENCHKCE--EFECKNGVCAKFEEL 1069
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG +C D SDE C +C + C+ CI + +CD +++C
Sbjct: 1070 CDGTNNC-GDNSDEAQ-CDVECRPSEFYCS-PYGCIDRSQMCDPKLNC------------ 1114
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEM--DCSTD-DIVDNTDEDWDKY-------- 332
+ F C Q + + + + +EEM C D ++V +TD++ K
Sbjct: 1115 LNAFSDCEQQQRNASANGTTVSPSVKTEEEMRGQCRFDINLVCDTDKECIKAYQKVCQNI 1174
Query: 333 ----FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-C 387
F+ V HP+ + C +N C+ + + CDG+PDC + DEG C + C+N+K C
Sbjct: 1175 TFPSFNETTVCQHPDRI-CRVTNTCIKVEQLCDGRPDCPDNTDEGFHCKDNL-CKNVKEC 1232
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
SH C P G +C CP PN +C C G+C Q CT Y CSC EGYT
Sbjct: 1233 SHTCHNAPEGFVCSCPEHLFLQPNGKECRVDHACTHWGTCSQVCTPDEKHYKCSCLEGYT 1292
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ D +C + NV D P +IFS+ +IR + LN
Sbjct: 1293 MTFDKFTCKSNNV--DAP-HVIFSNRQEIRGVDLN 1324
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 100/213 (46%), Gaps = 24/213 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ +C ++ CGS +C+ CDG DC +G DE N C+ +F C G+CIP
Sbjct: 3496 DKTVCADHQFMCGSG-KCITKVWACDGDIDCVDGSDERDCGNRTCSESEFRCNKGRCIPM 3554
Query: 221 SWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG DC E G DE +C C +C S KCIP W CD E DC
Sbjct: 3555 SWRCDGEDDCSE-GEDEKESCNPPEATTCEASYFRCNNS-KCIPGRWRCDYENDCG---- 3608
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + C + +C CI CD E +C+ D D D D
Sbjct: 3609 -DNSDELNCQMRNCSESEFRCD-DGHCIRGIRKCDGEFNCA--DHSDEADCD-------- 3656
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
V C P+E +C N C++ + CDG DC +G
Sbjct: 3657 -VSCQPDEFKCKGHNLCISNNFKCDGDNDCIDG 3688
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 140/357 (39%), Gaps = 65/357 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECTPGQFSCGMGKCIPE 220
C +E RC + +C+ +S CDG+ DCS GEDE CN C F C KCIP
Sbjct: 3539 CSESEFRC-NKGRCIPMSWRCDGEDDCSEGEDEKESCNPPEATTCEASYFRCNNSKCIPG 3597
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD------ 274
W+CD DC D SDE N + C + +C CI CD E +C+
Sbjct: 3598 RWRCDYENDC-GDNSDELNCQMRNCSESEFRCD-DGHCIRGIRKCDGEFNCADHSDEADC 3655
Query: 275 DIVDNTDEDWDKFHQ-CFNGQVQCAL-----------------------SKKCIPHNWLC 310
D+ DE K H C + +C + KCI NWLC
Sbjct: 3656 DVSCQPDEFKCKGHNLCISNNFKCDGDNDCIDGSDEEDCDCHDDEYRCDNGKCILRNWLC 3715
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DD +D +DE +Y N CH RC + N C+ + CD K DC +
Sbjct: 3716 D-----GIDDCLDRSDEK-SEYCKANG--CHKRAFRCSNGN-CIRKAMMCDNKNDCGDNS 3766
Query: 371 DEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI-------DG 423
DE + C LKC + C + K C+D + L G
Sbjct: 3767 DE-----KASQC--LKCPPDTFRCSSDSKCIANNQRCDGKPNCLDESDELGCRRSQCGFG 3819
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C Y C C GY P +C A QDE ++ SS D R ++
Sbjct: 3820 TCSQVCVEKKHQYNCRCQPGYQKGPLRNDTCIA----QDENGLLLVSSESDFRSMYY 3872
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 101/217 (46%), Gaps = 27/217 (12%)
Query: 165 CHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C ++ +C + + C+ K CDG DC N +DE C QF CG GKCI +
Sbjct: 3456 CFSSQFKCSKTQFNNSFCLEGVKRCDGHADCPNKDDEVGCDKTVCADHQFMCGSGKCITK 3515
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC+ DGSDE + C + +C +CIP +W CD E DCS +
Sbjct: 3516 VWACDGDIDCV-DGSDERDCGNRTCSESEFRCN-KGRCIPMSWRCDGEDDCS-----EGE 3568
Query: 281 DEDWD----KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE + C +C S KCIP W CD E DC DN+DE +
Sbjct: 3569 DEKESCNPPEATTCEASYFRCNNS-KCIPGRWRCDYENDCG-----DNSDE-----LNCQ 3617
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C +E RC C+ + CDG+ +C++ DE
Sbjct: 3618 MRNCSESEFRC-DDGHCIRGIRKCDGEFNCADHSDEA 3653
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLE 232
S QC++ S CD PDC + DE G C+ C C SW CDG DC
Sbjct: 2655 SGQCISKSHRCDNDPDCPDLSDELGCPRTRNCSAELLHCPYTTACYMPSWACDGENDCW- 2713
Query: 233 DGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
D SDE N + + C + CA + CIP NW CD E DC I + ++ +
Sbjct: 2714 DNSDEMNCTTSVVPTCPTDKFLCA-NGHCIPMNWRCDSEDDCLDGTITSLSSDEINCTRH 2772
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCG 348
C Q QC S +CIP++W CD DC+ D +DE H +C E C
Sbjct: 2773 CKPNQFQCLNSTECIPNSWQCDNNPDCA-----DGSDEG-----EHCQQRVCPEWEFHCP 2822
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
+S +C+ + CDG+ DC++ +++ C++
Sbjct: 2823 TSGRCITMKWRCDGEVDCTDDQEDEKNCDS 2852
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 165/460 (35%), Gaps = 150/460 (32%)
Query: 49 KRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
K L LA+++ RN C + +L + +L + +L P L+
Sbjct: 3135 KSTLKNPDGLAIDWVARNLYWCDKGLDTIEISKLD-GRYRKVLINQNLQEPRAIVLNPYR 3193
Query: 107 ------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN----------------- 137
+ KAGM G N++ LV++ + WP++L I++
Sbjct: 3194 KNMYWTDWGDQPHIGKAGMDGSNQTMLVSQQLGWPNALTINFETNELFWGDAREDYIAVS 3253
Query: 138 ------------------------------QDILYWCDSHLNTVE---SVRVD--GSHNA 162
+D +YW D ++E R D G+
Sbjct: 3254 DLEGNNRKVIIYRDMHPAMNLHHIFAVAVWEDRIYWTDWETKSIEYCHKYRGDQCGTLIK 3313
Query: 163 VLCHPNELR-----------------CGSSNQCVALSKFCDGKPDCSNGEDEGP---FCN 202
++ P +LR G S C+ + + C + GP C
Sbjct: 3314 MIHRPMDLRVYHPFRQRKPVEDPCLLAGCSTLCLLSPEAPGYRCACPDHFLLGPDNKTCI 3373
Query: 203 AECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIP 260
A C+ F C KCIP WKCD DC D SDEP+ C C +GQ QC + KCI
Sbjct: 3374 ANCSSAHFLCKTTFKCIPYYWKCDKQDDC-GDNSDEPDNCPEFTCESGQFQCD-NNKCIS 3431
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL--------------------- 299
+ +CD + C D +DE ++CF+ Q +C+
Sbjct: 3432 PSLICDGKDQCG-----DGSDEKGCDDYECFSSQFKCSKTQFNNSFCLEGVKRCDGHADC 3486
Query: 300 ----------------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
S KCI W CD ++DC VD +DE
Sbjct: 3487 PNKDDEVGCDKTVCADHQFMCGSGKCITKVWACDGDIDC-----VDGSDER-----DCGN 3536
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
C +E RC + +C+ +S CDG+ DCS GEDE CN
Sbjct: 3537 RTCSESEFRC-NKGRCIPMSWRCDGEDDCSEGEDEKESCN 3575
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 139/392 (35%), Gaps = 108/392 (27%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D A +++ D R +E+A G+NR L + P ++ + D+L+W D L+
Sbjct: 2426 TLDYQAKKLYWADARYDKIERADYDGKNRVVLAHSTPKHPFAMAV--YGDLLFWTDWILH 2483
Query: 150 TVESVRVDGSHNAVLCHPNELRCG------------SSNQCVALSKFC-------DGKPD 190
V + V + R S++ C L+ C DGK
Sbjct: 2484 AVIRANKYSGSDVVWLRKDIARPMGIVAVQHIDKDCSADPCKILNGGCEDTCLGVDGKGK 2543
Query: 191 CSNGEDEG----------PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
G +G P ++ C+ +FSC +G CIP CDG CL DGSDE +
Sbjct: 2544 ILCGCTQGVLAKDGYRCVPKLSSNCSSEEFSCSIGGCIPFYLTCDGIPHCL-DGSDELQS 2602
Query: 241 CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ---- 294
Q C G QC + +CIP +CD +C +N + QC +GQ
Sbjct: 2603 YCAQRTCSVGYFQCN-NHRCIPETQVCDSAQNCGDGSDEENCKCNAATQFQCKSGQCISK 2661
Query: 295 -----------------------------VQCALSKKCIPHNWLCDEEMDC--------- 316
+ C + C +W CD E DC
Sbjct: 2662 SHRCDNDPDCPDLSDELGCPRTRNCSAELLHCPYTTACYMPSWACDGENDCWDNSDEMNC 2721
Query: 317 ----------------------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
S DD +D T + C PN+ +C
Sbjct: 2722 TTSVVPTCPTDKFLCANGHCIPMNWRCDSEDDCLDGTITSLSSDEINCTRHCKPNQFQCL 2781
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+S +C+ S CD PDC++G DEG C +
Sbjct: 2782 NSTECIPNSWQCDNNPDCADGSDEGEHCQQRV 2813
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 100/227 (44%), Gaps = 25/227 (11%)
Query: 149 NTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----CNAE 204
N V VD + A C + C+ CDG DC +G DE P CNA
Sbjct: 910 NGTNCVAVDSAAPATCYDGTNFMCKNGVHCIQQKYTCDGDRDCDDGSDEEPAPDGPCNAH 969
Query: 205 CTPGQ-FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHN 262
C F C +CI S CDG V+C+++ ++ C +Q C + QC S++CIP +
Sbjct: 970 CDLEHFFKCDDQRCINRSLVCDGTVNCIDESDEDFTNCPNQTCIDNFFQCNTSRRCIPKS 1029
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
W+CD DC +D D + H+C + + + C LCD +C
Sbjct: 1030 WVCDRHPDCGPNDHSDEP----ENCHKCEEFECKNGV---CAKFEELCDGTNNCG----- 1077
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
DN+DE + V C P+E C S C+ S+ CD K +C N
Sbjct: 1078 DNSDE------AQCDVECRPSEFYC-SPYGCIDRSQMCDPKLNCLNA 1117
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 105 DERLEKAGMHGENRSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
D R+E A M+G R+ LV + WPS LVID Q LYWCDS +ESV ++G
Sbjct: 748 DGRIEWAWMNGTERATLVQGVDGSPMIWPSGLVIDQVQKRLYWCDSRTGRIESVSLEGHD 807
Query: 161 NAVL 164
+L
Sbjct: 808 RTLL 811
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCA 298
TCI C + C + KCIP+ W CD++ DC DN+DE D C +GQ QC
Sbjct: 3371 TCIANCSSAHFLCKTTFKCIPYYWKCDKQDDCG-----DNSDEPDNCPEFTCESGQFQCD 3425
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSS----NQC 353
+ KCI + +CD + C D +DE D Y C ++ +C + + C
Sbjct: 3426 -NNKCISPSLICDGKDQCG-----DGSDEKGCDDY------ECFSSQFKCSKTQFNNSFC 3473
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQC 413
+ K CDG DC N +DE C+ C+ C +G+ K
Sbjct: 3474 LEGVKRCDGHADCPNKDDE-------VGCDKTVCADH--------QFMCGSGKCITKVWA 3518
Query: 414 VDADECLIDGSCDQTCTN 431
D D +DGS ++ C N
Sbjct: 3519 CDGDIDCVDGSDERDCGN 3536
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E++ + G NR+ +V K I +P + +D +YW D++L+++E V DGS+ L
Sbjct: 433 VERSFLDGSNRTSIVLKKIVYPHGVALDLAMQHVYWVDTYLDSIERVNYDGSNRWFL 489
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 33/64 (51%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
P +++A G ++T +I+ P+++ +DY LYW D+ + +E DG +
Sbjct: 2396 PQAASIQRAYPSGYGLESIITTDIRMPNAITLDYQAKKLYWADARYDKIERADYDGKNRV 2455
Query: 163 VLCH 166
VL H
Sbjct: 2456 VLAH 2459
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++ + E + +GM G + LV NI+W S L ID D LYW D +T+E+
Sbjct: 4018 VWSVMEAIILSGMDGFKKQKLVQANIEWASGLAIDPTTDRLYWADYRKSTIET 4070
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 99/221 (44%), Gaps = 35/221 (15%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-----EDWD------KYFKRILN 53
C + QC S++CIP +W+CD DC +D D + E+++ F+ + +
Sbjct: 1012 CIDNFFQCNTSRRCIPKSWVCDRHPDCGPNDHSDEPENCHKCEEFECKNGVCAKFEELCD 1071
Query: 54 GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL------DER 107
GT+ ++ +++ C ++ C+ ++ + P++ L +++
Sbjct: 1072 GTNNCG---DNSDEAQCDVE---CRPSEFYCSPYG-CIDRSQMCDPKLNCLNAFSDCEQQ 1124
Query: 108 LEKAGMHGENRSPLVTK------NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
A +G SP V ++ +LV D +++ + ++ +++ +
Sbjct: 1125 QRNASANGTTVSPSVKTEEEMRGQCRFDINLVCDTDKECI---KAYQKVCQNITFPSFNE 1181
Query: 162 AVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+C HP+ + C +N C+ + + CDG+PDC + DEG C
Sbjct: 1182 TTVCQHPDRI-CRVTNTCIKVEQLCDGRPDCPDNTDEGFHC 1221
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---IVDNTDED 43
H+C + Q QC L+ KCIP W CD + DC + +D +DED
Sbjct: 104 HKCKDEQFQCKLTNKCIPRGWTCDGDADCGVVEKFRTIDVSDED 147
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 117 NRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
N++ ++ K+ ++ P L ID+ LYWCD L+T+E ++DG + VL + N
Sbjct: 3128 NKTEVLHKSTLKNPDGLAIDWVARNLYWCDKGLDTIEISKLDGRYRKVLINQN 3180
>gi|427788305|gb|JAA59604.1| Putative megalin [Rhipicephalus pulchellus]
Length = 4586
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 130/333 (39%), Positives = 165/333 (49%), Gaps = 37/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C + C S C+ S CDG DC + DE A C+ QF C K CI ES++
Sbjct: 1121 CAYYQFTCPGSGHCIPRSWVCDGDNDCFDQADENNCPPAVCSSSQFQCSNKKQCIHESYR 1180
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC +DGSDE P+ QC QC S+ CIP W CD DC D
Sbjct: 1181 CDGVSDC-QDGSDEQGCPSLAPDQCDLEKSFQCKKSRVCIPKLWYCDGNADCE-----DG 1234
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQV+C + KCI +W+CD DC DN+DED
Sbjct: 1235 SDEP----SSC--GQVECPQNHFKCNNSKCIFKSWICDGSDDCG-----DNSDEDSRHAC 1283
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHK 390
C + C G +++CV +S CDGKPDC NG DEGP C + C+ K C+H
Sbjct: 1284 VAPKFQCEHGQWLCPGVTDRCVNISSVCDGKPDCPNGADEGPGCASTP-CKGNKAGCTHG 1342
Query: 391 CSPTPRGAMCFCPAGQNPN-KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C TP G +C CP G+ N T CVD +ECLI G+C Q CTN+ S+ CSC GYTL
Sbjct: 1343 CHVTPVGPLCTCPKGEVLNDTTTCVDLNECLIAGTCSQHCTNSKGSFTCSCEPGYTLELK 1402
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C A N A ++ S+ I +L+ S
Sbjct: 1403 HR-CKATNRSD---AFLVISNRRSILVANLDTS 1431
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 162/365 (44%), Gaps = 66/365 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGM-----GKCI 218
C + RC S+ +C+ L CD + DC GEDE C +C QFSCG CI
Sbjct: 35 CSTDNFRC-SNGRCIPLRWVCDYQKDCEEGEDEHQSCAPPQCNSNQFSCGQYVFNQSYCI 93
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCST---- 273
P+ W+CD VDC+ DG+DE C ++ C +C S C+P + CD DC
Sbjct: 94 PKHWRCDQVVDCV-DGTDESGDCKYRVCEESDHKCG-SGLCVPASKKCDGYYDCRDESDE 151
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD DN+DE+ F C GQ +C +
Sbjct: 152 ASCTTNGTACRLNEFRCRHGNKCIDESKKCDHWDDCGDNSDEEGCDFPPCNEGQFRCT-N 210
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CIP W CD DCS D +DE + +V C + C S +C+ SK C
Sbjct: 211 AICIPIRWRCDGHSDCS-----DQSDER-----NCTSVTCLDTKFLCPSEKKCIDKSKLC 260
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN---KTQCVDAD 417
DGK DC +G DE C++ C L C H C + G CFCP G N K C+D +
Sbjct: 261 DGKQDCDDGADEKKNCSSSL-CRTLSCEHGCRASLEGGDCFCPPGMTINTKDKRSCMDLN 319
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G CDQ CTN+ SY C C GYTL P + C A N ++F+ I +
Sbjct: 320 ECSEWGYCDQLCTNSPGSYQCLCVRGYTLDPP-RHCKADN---SSAMRLLFTRHNAIYSV 375
Query: 478 HLNGS 482
+G+
Sbjct: 376 SSDGA 380
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/342 (33%), Positives = 157/342 (45%), Gaps = 44/342 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNA-ECTP-GQFSC------GM 214
C + C + N CV CDG DC + DE C+ EC P +F C G
Sbjct: 2877 CFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDEDARHQCDTRECDPEREFKCTQNKQWGR 2935
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF-------NGQVQCALSKKCIPHNWLCDE 267
CIP+ W CDG DC+ DG+DE NT H C Q QC +++CI +W+CD
Sbjct: 2936 ATCIPKRWVCDGDPDCV-DGADE-NTTAHNCPAPEPCDPEKQYQCK-NQRCINKDWVCDH 2992
Query: 268 EMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC D +DE + F C + + C + KCI ++ CD E DC D +D
Sbjct: 2993 DNDCG-----DGSDEPRNCTFRNCTSEEFTCR-NAKCIRKSYHCDGEDDCG-----DGSD 3041
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E +K C + RC S QC+ + C+ + DCS+G DE CN A E
Sbjct: 3042 E-LEKDCKKEETTCSGAQFRC-KSGQCIPYERVCNKQQDCSDGSDEPAHCNVDECAKVEL 3099
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGS-CDQTCTNTHLSYVCSCT 441
+C HKC T C C G K C D +EC + S C Q C N+ SY C C
Sbjct: 3100 NQCEHKCVNTLTSFYCECNEGYELLKDGKACADINECQVKPSVCSQYCVNSPGSYFCKCN 3159
Query: 442 EGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ Y R DG++C + D +IFS+ +R L+GS
Sbjct: 3160 QTYYDREFDGRTCKRKD---DIVPWLIFSNRYYLRNTSLDGS 3198
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 110/233 (47%), Gaps = 20/233 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E RCGS +C+ LS CD DC + DE N +C +FSC G+CIP+SWKC
Sbjct: 1042 CSPREFRCGSG-RCIPLSFKCDSDNDCGDFSDETGCTNVKCDNSEFSCENGRCIPQSWKC 1100
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC DGSDE + C + C Q C S CIP +W+CD + DC D DE+
Sbjct: 1101 DSENDC-GDGSDEGDFCKEKTCAYYQFTCPGSGHCIPRSWVCDGDNDC-----FDQADEN 1154
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + Q QC+ K+CI ++ CD DC D +DE + +
Sbjct: 1155 NCPPAVCSSSQFQCSNKKQCIHESYRCDGVSDCQ-----DGSDEQGCPSLAPDQCDLE-K 1208
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------NKADCENLKCSHK 390
+C S C+ +CDG DC +G DE C N C N KC K
Sbjct: 1209 SFQCKKSRVCIPKLWYCDGNADCEDGSDEPSSCGQVECPQNHFKCNNSKCIFK 1261
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 100/198 (50%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ + CDG DC + DE C C+P +F CG G+CIP S+KCD DC D S
Sbjct: 1013 RCIPKTWVCDGDDDCLDNSDEMNNCTRNTCSPREFRCGSGRCIPLSFKCDSDNDC-GDFS 1071
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE +C N + C + +CIP +W CD E DC D +DE D+ K C Q
Sbjct: 1072 DETGCTNVKCDNSEFSCE-NGRCIPQSWKCDSENDCG-----DGSDEGDFCKEKTCAYYQ 1125
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C S CIP +W+CD + DC D DE+ + +C ++ +C + QC+
Sbjct: 1126 FTCPGSGHCIPRSWVCDGDNDC-----FDQADEN-----NCPPAVCSSSQFQCSNKKQCI 1175
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CDG DC +G DE
Sbjct: 1176 HESYRCDGVSDCQDGSDE 1193
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 112/244 (45%), Gaps = 44/244 (18%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESW 222
C + RCG S+ +C+++ CDG+ DC +G DE C GQF C C+P
Sbjct: 3486 CTEGQFRCGGSDDRCISVFWKCDGEKDCRDGSDEVGCPAFSCKKGQFQCHNNATCVPRIK 3545
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC D SDE C + C +C + +C+P +W CD + DC+ D +DE
Sbjct: 3546 ICDGHNDC-GDQSDE-KFCGYPCGEHNFKCQNTGRCVPVSWQCDGDNDCT-----DGSDE 3598
Query: 283 D----------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D D ++C NG KCIP W CD + DC DN+DE K
Sbjct: 3599 DPAICHHQECNTDTQYKCNNG--------KCIPKLWYCDFDDDCG-----DNSDEPAHKC 3645
Query: 333 FSHNAVLCHPNELRCGSSN--QCVALSKFCDGKPDCSNGEDEG-----PFCNNKAD--CE 383
+ N C +C S N +C+ FCDGK DC + DE P C+ D C
Sbjct: 3646 RNRN---CTTGWQKCPSVNNYRCIPTWLFCDGKDDCRDNSDETSPEYCPKCHETGDFKCR 3702
Query: 384 NLKC 387
N +C
Sbjct: 3703 NNRC 3706
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 101/221 (45%), Gaps = 29/221 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPE 220
A C + +C ++ CV K CDG DC + DE FC C F C G+C+P
Sbjct: 3524 AFSCKKGQFQCHNNATCVPRIKICDGHNDCGDQSDE-KFCGYPCGEHNFKCQNTGRCVPV 3582
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDN 279
SW+CDG DC + ++P C HQ N Q + KCIP W CD + DC DN
Sbjct: 3583 SWQCDGDNDCTDGSDEDPAICHHQECNTDTQYKCNNGKCIPKLWYCDFDDDCG-----DN 3637
Query: 280 TDEDWDKFHQCFNGQVQCALSK-------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+DE H+C N K +CIP CD + DC DN+DE +Y
Sbjct: 3638 SDE---PAHKCRNRNCTTGWQKCPSVNNYRCIPTWLFCDGKDDCR-----DNSDETSPEY 3689
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CH + +C +N+C+ L CD + DC + DE
Sbjct: 3690 CPK----CHETGDFKC-RNNRCIPLRWRCDFEDDCGDNSDE 3725
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 146/325 (44%), Gaps = 50/325 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV--------- 154
L E++E++ + G NR LV+ I +P ++ + ++ +YW D L V
Sbjct: 2541 LREKIERSDLDGNNRETLVSATI-YPFAITV--YENYIYWTDLQLRGVYRAEKHTGAGMI 2597
Query: 155 ----RVDGSHNAV-LCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGED 196
R++ S + + P+ +C N C + C +G +C +
Sbjct: 2598 EMVKRLEESPRDIHIYSPDRQKC-DKNPCSLQNGGCAHSCHQAPNGTIECLCNSTFKVAN 2656
Query: 197 EGPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQC 252
EG C N C +F+CG GKCIP W CDG DC ++ ++ + C H C + +C
Sbjct: 2657 EGRMCVPENVSCDDTKFACGNGKCIPRLWACDGDDDCGDNTDEDKSFCAQHTCGPTEFRC 2716
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +CI W CD E DC D+TDE+ ++ C +G+ CA + +CIP LC+
Sbjct: 2717 G-NGRCIFKTWKCDHENDCG-----DSTDEEGCEYPPCPDGEFTCA-NFRCIPKTQLCNG 2769
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC DN D N C N L+C ++N CV CDG DC + DE
Sbjct: 2770 VNDCK-----DNKTSDESHANCPNNRTCPGNHLKCETTNICVEPYWLCDGDNDCGDNSDE 2824
Query: 373 GPFCNNKADC--ENLKC-SHKCSPT 394
++ C + +C +H+C P
Sbjct: 2825 VALLCSQRTCPPNSFRCPNHRCIPA 2849
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 124/303 (40%), Gaps = 64/303 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD--------SHLNTVESVRV--D 157
+E + + G+NR V + P + D L+W D +H T E ++V +
Sbjct: 3364 IEFSDLDGKNRH-TVLQGRTVPHVFALTVFDDWLFWTDWNMKGVYRAHKFTGEKLQVLRN 3422
Query: 158 GSHNAVLCH--------PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------- 199
SH H P CG +N S C P S+ P
Sbjct: 3423 TSHRPYDIHVYHPLRQLPYPNPCGKNNG--GCSHLCLISPGASSFRCACPDNFVLLPDEK 3480
Query: 200 FCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
C A CT GQF CG +CI WKCDG DC DGSDE C GQ QC +
Sbjct: 3481 TCIANCTEGQFRCGGSDDRCISVFWKCDGEKDC-RDGSDEVGCPAFSCKKGQFQCHNNAT 3539
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKF--HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
C+P +CD DC D +DE KF + C +C + +C+P +W CD + D
Sbjct: 3540 CVPRIKICDGHNDCG-----DQSDE---KFCGYPCGEHNFKCQNTGRCVPVSWQCDGDND 3591
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNE------LRCGSSNQCVALSKFCDGKPDCSNG 369
C+ D +DED +CH E +C ++ +C+ +CD DC +
Sbjct: 3592 CT-----DGSDED--------PAICHHQECNTDTQYKC-NNGKCIPKLWYCDFDDDCGDN 3637
Query: 370 EDE 372
DE
Sbjct: 3638 SDE 3640
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 134/356 (37%), Gaps = 91/356 (25%)
Query: 171 RCGSSN--QCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDG 226
+C S N +C+ FCDGK DC + DE +C G F C +CIP W+CD
Sbjct: 3656 KCPSVNNYRCIPTWLFCDGKDDCRDNSDETSPEYCPKCHETGDFKCRNNRCIPLRWRCDF 3715
Query: 227 FVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DC ++ ++ C C + QCA +KKCIP W CD + DC D +DE
Sbjct: 3716 EDDCGDNSDEDSTMCAELYRDCSESEFQCA-NKKCIPSRWRCDHDNDCD-----DGSDEK 3769
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C Q +C S CI +CD DC D +DE + C N
Sbjct: 3770 DCLNYACKENQFKCN-SGHCILSRLVCDGNKDCH-----DVSDEQNCPTRVPGGLYCQEN 3823
Query: 344 ELRCGSS-----------------------------------------NQCVALSKFCDG 362
+C ++ N+C+ L + C+G
Sbjct: 3824 MFQCNNTVCIRPDFMCDGDDDCGDFSDEADSICKDHKCDVTRKFQCQNNKCIPLWQLCNG 3883
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF-CPAGQ-NPNKTQCVDADEC- 419
DC +G DE NN C L +P P A F C G+ P C D+C
Sbjct: 3884 NDDCGDGSDE----NNHQLCGKL------TPLPCLATEFKCTNGKCIPRVEVCNRKDDCG 3933
Query: 420 ---------------LIDGSCDQTCTNTHLS--YVCSCTEGYTLRPDG-KSCTAVN 457
G C+ CT S Y+C+C GY ++ D K C +N
Sbjct: 3934 DLSDERGCHEGTCDAATRGGCEHNCTTLGDSNGYICTCASGYKIKDDDPKRCEDIN 3989
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C NE RC N+C+ SK CD DC + DE C GQF C CIP
Sbjct: 157 NGTACRLNEFRCRHGNKCIDESKKCDHWDDCGDNSDEEGCDFPPCNEGQFRCTNAICIPI 216
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
W+CDG DC D SDE N C + + C KKCI + LCD + DC
Sbjct: 217 RWRCDGHSDC-SDQSDERNCTSVTCLDTKFLCPSEKKCIDKSKLCDGKQDC 266
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 136/330 (41%), Gaps = 35/330 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C ++ +C+ CD DC +G DE N C QF C G CI C
Sbjct: 3737 CSESEFQC-ANKKCIPSRWRCDHDNDCDDGSDEKDCLNYACKENQFKCNSGHCILSRLVC 3795
Query: 225 DGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE N C QC + P ++ D D+
Sbjct: 3796 DGNKDC-HDVSDEQNCPTRVPGGLYCQENMFQCNNTVCIRPDFMCDGDDDCGDFSDEADS 3854
Query: 280 TDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+D H+C + QC + KCIP LC+ DC D +DE+ +
Sbjct: 3855 ICKD----HKCDVTRKFQCQ-NNKCIPLWQLCNGNDDCG-----DGSDENNHQLCGKLTP 3904
Query: 339 L-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL-KCSHKCSPT-- 394
L C E +C ++ +C+ + C+ K DC + DE D C H C+
Sbjct: 3905 LPCLATEFKC-TNGKCIPRVEVCNRKDDCGDLSDERGCHEGTCDAATRGGCEHNCTTLGD 3963
Query: 395 PRGAMCFCPAG---QNPNKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDG 450
G +C C +G ++ + +C D +EC G +C Q C N Y C C EGY +
Sbjct: 3964 SNGYICTCASGYKIKDDDPKRCEDINECATFGHNCSQICENLMGDYGCRCKEGYEMFK-- 4021
Query: 451 KSCTAVNVPQDEPASII-FSSTVDIRRIHL 479
C A PA I+ +++ DIR + L
Sbjct: 4022 SHCHAKG-----PAPIVLYTNGPDIRMLDL 4046
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M G R +V I +P+ L IDY D +YWCDS LNT+E+ + DGS+ V+
Sbjct: 4183 KIETAWMDGSKRRIIVGDKIGYPTGLTIDYASDHRIYWCDSKLNTIETAKQDGSNRVVI 4241
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E G+ G R +V I WP+ L +D +Y+ DS L+ ++ DGS
Sbjct: 1552 RVESVGLDGTMRKTIVHTKIYWPNGLTLDLPNKRIYFADSKLDYIDFCNYDGSGRQQVLA 1611
Query: 160 HNAVLCHPNEL 170
HN L HP+ L
Sbjct: 1612 HNHYLLHPHSL 1622
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Query: 27 EEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLR 83
E + S ++ V+ DW + Y+ GT + N + + + ++ +
Sbjct: 743 ENVLASQNEGVEGLALDWVSHNLYYIDSRKGTLNVISVKNFQYRRTLLKNLKRPRAIVVH 802
Query: 84 CAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
+ + WD PA + +A + G N + WP+ L ID+ D LYW
Sbjct: 803 PNKGYVFYSEWDRPA--------NISRAYLDGSNVMVFRGVLLGWPNGLSIDFQTDRLYW 854
Query: 144 CDSHLNTVESVRVDGSHNAVLCHP 167
CD+ L+ ++ +DG+ + P
Sbjct: 855 CDALLDHIQHANLDGTDVQTINSP 878
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 108 LEKAGMHGEN--RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + G+ G N R L + WP++L IDY D L+W D+HL+ +E +DG + +
Sbjct: 3319 IGRMGLDGTNFTRIVLYENKLVWPNALTIDYFSDKLFWADAHLDYIEFSDLDGKNRHTV 3377
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKA + G NR P+V I P L ID +YW DS + V+ V G + +
Sbjct: 2191 KIEKAYLDGTNRVPIVVTGISNPRDLTIDIVTHDVYWVDSREDAVQKVSFSGGNRQYVRK 2250
Query: 167 --PNELRCGSSNQCV 179
PN + S Q V
Sbjct: 2251 NLPNPMGVAVSGQYV 2265
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
F + +++A M G +R+ +VT I + L +DY L WCDS L+ + ++ GS+
Sbjct: 492 FFSDGDHIDRAHMDGSHRTTIVTA-IYKATGLTVDYVTKFLVWCDSQLDQIVAIDYTGSN 550
Query: 161 NAVL 164
++
Sbjct: 551 RNII 554
>gi|426222491|ref|XP_004005424.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Ovis
aries]
Length = 4651
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 124/361 (34%), Positives = 170/361 (47%), Gaps = 60/361 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
CH N+ C + C+ S CDG+ DC++G DE C C+ QF+C G+CIP ++
Sbjct: 72 CHSNQFLCPNEQLCIPESWVCDGEDDCNDGADERRHCPGITCSSRQFTCENGECIPGEFR 131
Query: 224 CDGFVDCLEDGSDEPN------------------------------------TCIHQCFN 247
CD DCL DG+DE N C H C
Sbjct: 132 CDHSTDCL-DGTDEKNCRYPVCEQLTCASGACYNTSQRCNGQVDCRDASDERNCTHLCSR 190
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ QC S +CIP ++CD E+DC D +DE + C + C + CI +
Sbjct: 191 TEFQCG-SGQCIPRTYVCDHEIDCE-----DGSDELSCAYRTCKGNEFTCP-NGVCIAQS 243
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD + DC+ DN DED + + C+PNE C S +C+ +SK CDG DC
Sbjct: 244 WVCDGDGDCA-----DNADEDGCESKINRTFECYPNEWACPKSGKCIPISKVCDGTLDCP 298
Query: 368 NGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT-QCVDADECL 420
GEDE + C +L C ++C +P G MC+CP G N N+T CVD D+C
Sbjct: 299 GGEDESNITAGQQCDVNLCPSLGCEYQCHKSPGGGMCYCPPGFIVNQNRTNNCVDFDDCQ 358
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
I G CDQ C + + C C EGY L K C A N E A +IFS D+ + ++
Sbjct: 359 IWGVCDQICEDRIGHHRCHCAEGYVLERQ-KHCRA-NSSFGE-AFVIFSDGRDLLKGSIH 415
Query: 481 G 481
G
Sbjct: 416 G 416
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 142/300 (47%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C P + +C ++C+ALS CDG DC++G DE C CT QF+C G+CI ++++
Sbjct: 1154 CSPTQFQC-PGHRCIALSFVCDGTKDCADGSDE-IGCIINCTASQFTCVSNGQCISKTYR 1211
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP W CD DC + +
Sbjct: 1212 CDGVFDC-DDHSDETDCPTRPPGMCHQDEFQCQEDGICIPKTWECDGHEDC----LQGSD 1266
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C C + CI +WLCD + DC D +DE K C
Sbjct: 1267 EHNGCPPKTCHPSHFVCQ-NGNCIYRSWLCDGDNDCG-----DMSDE---KDCPTQPFQC 1317
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAM 399
+ +C + CV LS CDG PDC +G DE P CN N N C+H+C P GA
Sbjct: 1318 PSWQWQCPGHSICVNLSAVCDGVPDCPSGTDESPLCNQNSCSDSNGGCTHQCIQGPYGAQ 1377
Query: 400 CFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G N +KT C D DEC G C Q C N S+ C C Y L D ++C
Sbjct: 1378 CQCPLGYLLGNDSKT-CEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYRLDADQRTCKVT 1436
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 113/346 (32%), Positives = 161/346 (46%), Gaps = 43/346 (12%)
Query: 157 DGSHNAVLCHPNELRCGS------SNQCVALSKFCDGKPDCSN--GEDEGPFCNAE---C 205
DGS C ++ C S +N+C+ + CDG DC + EDE C +E C
Sbjct: 2889 DGSDEPPTCEFSQSTCASDYFKCDNNRCIPMMWVCDGDNDCGDMSDEDERHSCTSENRNC 2948
Query: 206 TPGQFSCGMG-----KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCI 259
+ +F+C +G CIPESW CDG DCL D SDE C + CF + C + CI
Sbjct: 2949 SSSEFACAVGVRPHRGCIPESWICDGEADCL-DASDEHQNCTRRSCFGTEFVCN-NGLCI 3006
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P+++ CD DC D +DE + C C + CI ++CD + DC
Sbjct: 3007 PNHFRCDRNNDCG-----DYSDERGCVYPTCGETLFTCQ-NGLCINKAYVCDGDNDCR-- 3058
Query: 320 DIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
DN+DE ++ H C P++ RC + N C+ + K C+ PDC + DE N
Sbjct: 3059 ---DNSDE--LEHLCHTPETTCPPHQFRCDNGN-CIEMVKVCNHFPDCLDSSDEKGCGIN 3112
Query: 379 KADCENLK-CSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHL 434
+ + L C+ C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 ECNDPTLSGCNQNCTDTLTSFYCSCNPGYKLLSDKRTCVDIDECKETPFICSQKCENLPG 3172
Query: 435 SYVCSCTEGYTLRPDGKSCTA-VNVPQDEPASIIFSSTVDIRRIHL 479
+Y+C C GY PDGK+C N+ D +IFS+ +R + +
Sbjct: 3173 TYICKCAPGYIREPDGKTCRQNSNIEPD----LIFSNRYYLRNLTI 3214
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 148/335 (44%), Gaps = 42/335 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC C+ CD DC + DE C PG F C G CI E KC
Sbjct: 3760 CTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDCEMMTCRPGYFQCDSGHCISEHLKC 3818
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
+G DC D SDE N C + NG A +C H +W CD + DC D
Sbjct: 3819 NGLADC-HDASDEAN-CPTRFPNGAYCPATMFECKNHVCIHSSWKCDGDNDCG-----DG 3871
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ H C N + +C + +CI + +C++E DC D +DE +
Sbjct: 3872 SDEE---LHLCLNVACDSPYRFRCD-NNRCIYRHEVCNQEDDCG-----DGSDEKEELCV 3922
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKCSHKC 391
C P+E +C S+ +C+ + CD DC + DE CN D C C H C
Sbjct: 3923 EPTPRPCTPDEFKC-SNGRCIPQHRVCDHVNDCGDNFDEMG-CNRGKDRSCAESLCEHNC 3980
Query: 392 SPTPRGA-MCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
+ G +C C G PN + C D +EC GSC Q C NT SY CSC EG+T
Sbjct: 3981 TQLREGGFICSCRPGFKPNSIDRNLCEDINECTQFGSCPQICHNTKGSYECSCAEGFTSL 4040
Query: 448 PD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D G+ C A P ++ V IR+ +L+
Sbjct: 4041 SDRYGERCAA----DGSPPLLLLPENVRIRKYNLS 4071
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGM-GKCIPES 221
C P C + +CV L CDG DC + DE NA C+P F C G CIP
Sbjct: 1030 CGPLSFSC-HNGRCVPLRYRCDGFDDCLDNSDEVQCTTSNATCSPLAFECKREGHCIPSM 1088
Query: 222 WKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W+CDG DCL DGSDE P C Q C + CIP +W+CD + DC D
Sbjct: 1089 WRCDGENDCL-DGSDEQNCPTRAPTSCRANQFTCD-NNFCIPRSWVCDTDNDCR-----D 1141
Query: 279 NTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE + Q C Q QC +CI +++CD DC+ D +DE
Sbjct: 1142 GSDEKSCNYTQTCSPTQFQCP-GHRCIALSFVCDGTKDCA-----DGSDE------IGCI 1189
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C ++ C S+ QC++ + CDG DC + DE
Sbjct: 1190 INCTASQFTCVSNGQCISKTYRCDGVFDCDDHSDE 1224
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/185 (36%), Positives = 87/185 (47%), Gaps = 24/185 (12%)
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQV 250
N E P +C P FSC G+C+P ++CDGF DCL D SDE T C
Sbjct: 1020 NASQEPPV--EQCGPLSFSCHNGRCVPLRYRCDGFDDCL-DNSDEVQCTTSNATCSPLAF 1076
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHN 307
+C CIP W CD E DC +D +DE C Q C + CIP +
Sbjct: 1077 ECKREGHCIPSMWRCDGENDC-----LDGSDEQNCPTRAPTSCRANQFTCD-NNFCIPRS 1130
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD + DC D +DE Y C P + +C ++C+ALS CDG DC+
Sbjct: 1131 WVCDTDNDCR-----DGSDEKSCNY----TQTCSPTQFQC-PGHRCIALSFVCDGTKDCA 1180
Query: 368 NGEDE 372
+G DE
Sbjct: 1181 DGSDE 1185
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 139/340 (40%), Gaps = 93/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G ++S +++ I WP+ L IDY D+LYW D+H
Sbjct: 3346 IGRVGMDGTHKSLIISTKIMWPNGLTIDYTNDLLYWADAHLGYIEYSDLDGRHRHTVYET 3405
Query: 148 ----------------------LNTVESV-RVDGSHNAVLC------------HPNEL-- 170
TVE + +GS+ VL HP
Sbjct: 3406 GTLSHPFAITIFEDTIYWTDWNTKTVEKGNKYNGSNRVVLLNVTHRPYDIHVYHPYRQPI 3465
Query: 171 ---RCGSSN-QCVALSKFCDGK-------PDCSNGEDEG--PFCNAECTPGQFSCGMGK- 216
CG++N C L +G PD G C C+ QF C +
Sbjct: 3466 VANPCGTNNGGCSHLCLIKEGGVGFTCECPDNFYTVQRGHNTQCLPMCSSTQFLCSNSEM 3525
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP WKCDG DCL DGSDEP TC + C G QC C + LC+ DC
Sbjct: 3526 CIPIWWKCDGRRDCL-DGSDEPVTCPQRFCALGMFQCT-DGNCTSSHSLCNLRRDCP--- 3580
Query: 276 IVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DED + HQC + QCA +K+CIP +W C D+ D+ D++ D+
Sbjct: 3581 --DGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESWQC---------DMEDDCDDNSDEDS 3628
Query: 334 SHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
SH A C P +C ++ C+ + CD DC + DE
Sbjct: 3629 SHCANRTCRPGYFKC-ANGHCIPQTWKCDVDNDCGDYSDE 3667
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 109/242 (45%), Gaps = 30/242 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C +S C+ + CDG+ DC +G DE C C G F C G C
Sbjct: 3512 MCSSTQFLCSNSEMCIPIWWKCDGRRDCLDGSDEPVTCPQRFCALGMFQCTDGNCTSSHS 3571
Query: 223 KCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE P C HQC + QCA +K+CIP +W CD E DC + D++
Sbjct: 3572 LCNLRRDC-PDGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESWQCDMEDDCDDNSDEDSS 3629
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C G +CA + CIP W CD + DC D +DE + +
Sbjct: 3630 HC---ANRTCRPGYFKCA-NGHCIPQTWKCDVDNDCG-----DYSDEPLQECLGPSYRCD 3680
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHKC 391
+ E C ++ +C+ C+G DC + DE DCE++ C +H+C
Sbjct: 3681 NYTEFSCKTNYRCIPKWAVCNGVNDCRDNSDE-------QDCESMTCKPSGEFRCTNHRC 3733
Query: 392 SP 393
P
Sbjct: 3734 IP 3735
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 113/231 (48%), Gaps = 32/231 (13%)
Query: 156 VDGSHNAV-----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG 208
+DGS V C +C N C + C+ + DC +G DE P + +C P
Sbjct: 3540 LDGSDEPVTCPQRFCALGMFQCTDGN-CTSSHSLCNLRRDCPDGSDEDPVLCEHHQCEPY 3598
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
++ C +CIPESW+CD DC ++ ++ + C ++ C G +CA + CIP W CD
Sbjct: 3599 EWQCANKRCIPESWQCDMEDDCDDNSDEDSSHCANRTCRPGYFKCA-NGHCIPQTWKCDV 3657
Query: 268 EMDCSTDDIVDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE + ++C N + C + +CIP +C+ DC
Sbjct: 3658 DNDCG-----DYSDEPLQECLGPSYRCDNYTEFSCKTNYRCIPKWAVCNGVNDCR----- 3707
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ C P+ E RC ++++C+ L CDG+ DC + DE
Sbjct: 3708 DNSDEQ-----DCESMTCKPSGEFRC-TNHRCIPLRWRCDGQNDCGDRSDE 3752
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 88/200 (44%), Gaps = 13/200 (6%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE- 232
++ +CV S CD DC + DE C +F+C G+CI CDG +C +
Sbjct: 2748 ANGRCVPYSDRCDHYNDCGDNSDEAGCRFRACNKTEFTCSNGRCILSELVCDGIDNCHDG 2807
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
+ SDE N C G +C S CIP ++L + + + + C +
Sbjct: 2808 NASDEKNCSERTCHPGYTKCTNSTICIPRSFL---CDGDDDCGDMSDENPVFCATRSCKS 2864
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ C S CIP W CD E DCS D +DE FS + C + +C +N+
Sbjct: 2865 DEFHCT-SGPCIPARWYCDHEKDCS-----DGSDEPPTCEFSQST--CASDYFKC-DNNR 2915
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ + CDG DC + DE
Sbjct: 2916 CIPMMWVCDGDNDCGDMSDE 2935
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 99/231 (42%), Gaps = 43/231 (18%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
C +F C G CI SW+CDG DC +G+DE C + Q C + CIP +W
Sbjct: 32 RCRSNEFLCQPGLCITASWRCDGTRDC-PNGADEIGCPTSSCHSNQFLCPNEQLCIPESW 90
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
+CD E DC+ D DE + H C + Q C + +CIP + CD DC
Sbjct: 91 VCDGEDDCN-----DGADE---RRHCPGITCSSRQFTCE-NGECIPGEFRCDHSTDC--- 138
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+D TDE +Y + C +S C S+ C+G+ DC + DE
Sbjct: 139 --LDGTDEKNCRYPVCEQLTC--------ASGACYNTSQRCNGQVDCRDASDE------- 181
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
C+H CS T C +GQ +T D + DGS + +C
Sbjct: 182 -----RNCTHLCSRTEFQ----CGSGQCIPRTYVCDHEIDCEDGSDELSCA 223
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
LC E +CGS QC+ + CD + DC +G DE C +F+C G CI +SW
Sbjct: 187 LCSRTEFQCGSG-QCIPRTYVCDHEIDCEDGSDELSCAYRTCKGNEFTCPNGVCIAQSWV 245
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + +C+ + C S KCIP + +CD +DC
Sbjct: 246 CDGDGDCADNADEDGCESKINRTFECYPNEWACPKSGKCIPISKVCDGTLDC 297
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 138/372 (37%), Gaps = 69/372 (18%)
Query: 54 GTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDL----PAPEIF--- 102
G +L+ ++ RN ++VS ++L R I +L N + A IF
Sbjct: 790 GVQSLSFDWISRNLYWTDSSYRSVSVIKLADKSRRTIIQNLNNPRSIVVHPTAGYIFFSV 849
Query: 103 -PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
++ +A G N P+V + WPS L ID++ LYW D+ + +E DGS
Sbjct: 850 WYRPAKILRAWADGSNILPIVNTTLGWPSGLSIDWSSSRLYWIDAFFDKIEHSTFDGSDR 909
Query: 162 AVLCHPNEL-----------------------RCGSSN--QCVAL--------------S 182
L + +L R G N Q V L S
Sbjct: 910 KALTNIPQLTNPFGLAVSQDYIYVTDWRRGIIRFGKYNTGQSVILRSGVGSVMRAKVYDS 969
Query: 183 KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
+ G C+ + C+ C P S + C + C+ + S EP +
Sbjct: 970 RVQTGSNACNRPTNPNGDCSHFCFPVPSSQRVCGCPYGMSLASDHLTCVMNASQEPP--V 1027
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCFNGQVQCALS 300
QC C + +C+P + CD DD +DN+DE C +C
Sbjct: 1028 EQCGPLSFSCH-NGRCVPLRYRCD-----GFDDCLDNSDEVQCTTSNATCSPLAFECKRE 1081
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CIP W CD E DC +D +DE + C N+ C +N C+ S C
Sbjct: 1082 GHCIPSMWRCDGENDC-----LDGSDE--QNCPTRAPTSCRANQFTC-DNNFCIPRSWVC 1133
Query: 361 DGKPDCSNGEDE 372
D DC +G DE
Sbjct: 1134 DTDNDCRDGSDE 1145
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 120/286 (41%), Gaps = 55/286 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCI---HQCFN-GQVQCALSK 256
N C PG F C G CIP++WKCD DC D SDEP C+ ++C N + C +
Sbjct: 3633 NRTCRPGYFKCANGHCIPQTWKCDVDNDC-GDYSDEPLQECLGPSYRCDNYTEFSCKTNY 3691
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+CIP +C+ DC DN+DE D + +G+ +C + +CIP W CD + D
Sbjct: 3692 RCIPKWAVCNGVNDCR-----DNSDEQDCESMTCKPSGEFRCT-NHRCIPLRWRCDGQND 3745
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--- 372
C D +DE+ + C +E RC C+ CD DC + DE
Sbjct: 3746 CG-----DRSDEE-----NCAPRKCTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDC 3794
Query: 373 -------GPF-------------CNNKADCENLKCSHKCSPT--PRGAMCFCPAGQNPNK 410
G F CN ADC + C PT P GA +CPA K
Sbjct: 3795 EMMTCRPGYFQCDSGHCISEHLKCNGLADCHDASDEANC-PTRFPNGA--YCPATMFECK 3851
Query: 411 TQ-CVDAD-ECLIDGSC-DQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
C+ + +C D C D + HL +C Y R D C
Sbjct: 3852 NHVCIHSSWKCDGDNDCGDGSDEELHLCLNVACDSPYRFRCDNNRC 3897
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 128/349 (36%), Gaps = 89/349 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL----------------------- 141
+ ++E A M G +R LV + + WP+ L +DY Q++L
Sbjct: 2529 NAKIETATMGGYSRRSLVDRGLVWPNGLTMDYEQNLLYWADANLEKIERMDLERYLREVI 2588
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVLCHPNELRCGSSNQCVALSK 183
YW D + +VDGS + R V +
Sbjct: 2589 VSRANSPFGLALYGQYIYWTDMLTQKIYRANKVDGSDQTAVTMTLPFRPKGICAVVKGQQ 2648
Query: 184 FCDGKPDCSNGE--------DEGPFC---------------------NAECTPGQFSCGM 214
C D NG GP C C +F+C
Sbjct: 2649 QCQSPCDRFNGGCSHICAPGPNGPECQCPHEGRWYLANNNKYCIQDNGTRCDSSKFTCLS 2708
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKCIP+ +C+ DC D SDE T H C + CA + +C+P++ CD DC
Sbjct: 2709 GKCIPDQLQCNDIDDC-GDSSDELETLCAFHSCPSTSFTCA-NGRCVPYSDRCDHYNDCG 2766
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE +F C + C+ + +CI +CD +C + D +
Sbjct: 2767 -----DNSDEAGCRFRACNKTEFTCS-NGRCILSELVCDGIDNCHDGNASDEKN------ 2814
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
+ CHP +C +S C+ S CDG DC + DE P FC ++
Sbjct: 2815 --CSERTCHPGYTKCTNSTICIPRSFLCDGDDDCGDMSDENPVFCATRS 2861
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Query: 136 YNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
Y D ++ CD H + + R G +CH +E +C C+ + CDG DC G
Sbjct: 1210 YRCDGVFDCDDHSDETDCPTRPPG-----MCHQDEFQCQEDGICIPKTWECDGHEDCLQG 1264
Query: 195 EDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQ 251
DE C + C P F C G CI SW CDG DC D SDE + T QC + Q Q
Sbjct: 1265 SDEHNGCPPKTCHPSHFVCQNGNCIYRSWLCDGDNDC-GDMSDEKDCPTQPFQCPSWQWQ 1323
Query: 252 CALSKKCIPHNWLCDEEMDCST 273
C C+ + +CD DC +
Sbjct: 1324 CPGHSICVNLSAVCDGVPDCPS 1345
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
L+G+H + L H V + +D N + +P R+E+A
Sbjct: 501 LDGSHRITLISEHLGHPRGIAVDPTVGYLFF-----SDWQNVFGVP---------RIERA 546
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
M G NR LVT + WP + +D +YW DS + +E+V DG + H
Sbjct: 547 YMDGSNRKDLVTTKLGWPGGITLDLVSKRVYWVDSRFDYIETVTYDGLKRMTVIH 601
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M GE R LV +++ WP+ L IDY N D +YW D N VE+++ DG+ ++
Sbjct: 4210 KIESAWMDGERRKVLVQEDLGWPTGLCIDYMNDDRIYWSDLKDNIVETIKYDGTDRRIV 4268
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V + I WP+ L +DY +LY+ D +L+ ++ DGS+
Sbjct: 1582 RIERASMDGSQRTVIVQEKIYWPNGLALDYPNRLLYFMDGYLDFIDFCHYDGSNRRQVIA 1641
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1642 SDLILRHPYSL 1652
>gi|156403873|ref|XP_001640132.1| predicted protein [Nematostella vectensis]
gi|156227265|gb|EDO48069.1| predicted protein [Nematostella vectensis]
Length = 635
Score = 164 bits (415), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 123/329 (37%), Positives = 171/329 (51%), Gaps = 30/329 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E CG+ +C++ CD DC + DE C P +F+C +CI W+C
Sbjct: 42 CAPHEFSCGNG-RCISQQWVCDQDNDCGDFSDENHCPPHTCRPNEFTCADKRCILSRWRC 100
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC D SDE PN+ + C + + QC+ + +CI +W+CD E DC ++ +D
Sbjct: 101 DGDRDC-ADNSDEINCPNSSQY-CKSSEYQCS-TGECIHKSWVCDGEFDC-----LNKSD 152
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--- 338
E+ C Q CA +K+CIP C+ DC +DN+DE + FS A
Sbjct: 153 ENNCHSSACHISQFTCA-NKRCIPMRDRCNGNNDC-----LDNSDEADCRMFSLLATKPP 206
Query: 339 -LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPR 396
+C E +CGSS QC+ SK CDG DC+N DE C N+ N C H C+ T
Sbjct: 207 SICKDGEFQCGSSKQCIPESKVCDGSVDCTNSADEPDNCFINECKDNNGPCQHYCNDTKT 266
Query: 397 GAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C C G + C D DEC I GSC Q C N+ SY C+C EGY L PD K+C
Sbjct: 267 GYFCSCRPGYKVALDDPKSCRDVDECAIPGSCSQMCFNSKGSYKCTCMEGYRLEPDKKTC 326
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A+ D+P ++F++ DIRR+ ++ S
Sbjct: 327 KALG---DKPF-LLFTNRQDIRRLVMDSS 351
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 105 DERLEKAGMHG--ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
+ ++E+ GM+G + R +V NI WP++L IDY D ++W D+ +T+E +DG+
Sbjct: 470 EPKIERCGMNGDPKTRLQIVNTNILWPNALTIDYTIDKIWWADAKEHTIECANLDGTARR 529
Query: 163 VL 164
V+
Sbjct: 530 VI 531
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+C E +CGSS QC+ SK CDG DC+N DE
Sbjct: 208 ICKDGEFQCGSSKQCIPESKVCDGSVDCTNSADE 241
>gi|390338381|ref|XP_785482.3| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Strongylocentrotus purpuratus]
Length = 1990
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 124/338 (36%), Positives = 171/338 (50%), Gaps = 37/338 (10%)
Query: 157 DGSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFS 211
DGS L C +E C C+A CDG DCS+G DE CT GQ++
Sbjct: 141 DGSDETCLRTCRDDEFTC-EGGGCIAREWKCDGDSDCSDGSDEKNCSIVDTGACTQGQYT 199
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C G+CI S+ CDG DC +D SDE + C + + CA + CI W CD + DC
Sbjct: 200 CNTGQCIFMSYVCDGERDC-DDNSDEDHCANITCRDNEFLCA-NNVCITAQWYCDGDYDC 257
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE C + Q QCA S +CI W CD E DC DN+DE+
Sbjct: 258 E-----DQSDELDCPVTTCLSNQFQCA-SGRCITAAWECDGENDCG-----DNSDEE--S 304
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GP--FCNNKADCE- 383
+ LC+ N+ +C ++++C+ K C+G+ DC +G DE GP + + C
Sbjct: 305 CSNAGPTLCNANQFQC-NNDRCIGNRKVCNGRDDCGDGSDELVEPDGPCNIIDPSSSCHS 363
Query: 384 -NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
+ C H C+ G C C G + N C D DECL++G C QTCTNT S++C+C
Sbjct: 364 NDGGCEHTCTDVSSGVRCSCREGYTLDMNGKTCRDIDECLVEGICSQTCTNTLGSFLCTC 423
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
EGY LR DGK+C A Q ++F++ +DIRR+
Sbjct: 424 IEGYELRLDGKTCKA----QGPEPYLLFANRIDIRRLE 457
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 137/379 (36%), Gaps = 122/379 (32%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL----- 231
C+ L CD DC + DE C +FSCG G CIP W CDG DC
Sbjct: 46 MCIPLKWRCDQDDDCGDNGDEIDCERPSCKASEFSCGTGLCIPSEWVCDGDNDCKDNSDE 105
Query: 232 ----------------------------------EDGSDEPNTCIHQCFNGQVQCALSKK 257
+DGSDE TC+ C + + C
Sbjct: 106 AECSRVECEGEDLFRCNNDHCIRSAFVCDGDNDCKDGSDE--TCLRTCRDDEFTCE-GGG 162
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDE---DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
CI W CD + DCS D +DE C GQ C + +CI +++CD E
Sbjct: 163 CIAREWKCDGDSDCS-----DGSDEKNCSIVDTGACTQGQYTCN-TGQCIFMSYVCDGER 216
Query: 315 DCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC DN+DED H A + C NE C ++N C+ +CDG DC + DE
Sbjct: 217 DCD-----DNSDED------HCANITCRDNEFLC-ANNVCITAQWYCDGDYDCEDQSDEL 264
Query: 373 ----------------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP-- 408
C+ + DC + CS C A Q
Sbjct: 265 DCPVTTCLSNQFQCASGRCITAAWECDGENDCGDNSDEESCS---NAGPTLCNANQFQCN 321
Query: 409 ------NKTQCVDADEC---------------LID---------GSCDQTCTNTHLSYVC 438
N+ C D+C +ID G C+ TCT+ C
Sbjct: 322 NDRCIGNRKVCNGRDDCGDGSDELVEPDGPCNIIDPSSSCHSNDGGCEHTCTDVSSGVRC 381
Query: 439 SCTEGYTLRPDGKSCTAVN 457
SC EGYTL +GK+C ++
Sbjct: 382 SCREGYTLDMNGKTCRDID 400
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G R ++T N++WP+ + +D + D ++W D+ +ES +DGS +L +
Sbjct: 1192 RIERAGMDGTGREAIITSNLEWPNGVSVDESTDRVFWVDARTERLESCSLDGSSRRLLVY 1251
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E +GM G R LV+ + WP+ LV+D + LYW D+ +E +DGS+ +L
Sbjct: 883 DPKIECSGMDGSERKVLVSYGLIWPNGLVLDRDLQRLYWADAGTKRIEFSNLDGSYREIL 942
Query: 165 CHPN 168
N
Sbjct: 943 ISLN 946
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A G R L+ + WP+ L IDY LYW D++L+ +E+ G VL
Sbjct: 1496 KIERAHFDGTGRRTLINTELGWPNGLTIDYAMRRLYWVDAYLDKIETADFSGKFRVVL 1553
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 36/60 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E + + G +RS + + WP+ L +DY + L+W D+ +++ES +DG+ ++ +
Sbjct: 580 KIEVSHLDGSSRSVIADTMLFWPNGLTLDYATEKLFWADAKHHSIESANLDGTGRKIVIN 639
>gi|241287401|ref|XP_002407037.1| low density lipid receptor-related protein, putative [Ixodes
scapularis]
gi|215496981|gb|EEC06621.1| low density lipid receptor-related protein, putative [Ixodes
scapularis]
Length = 4124
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 129/332 (38%), Positives = 164/332 (49%), Gaps = 35/332 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C + C S C+ S CDG DC + DE A C+ QF C K CI ES++
Sbjct: 922 CAYYQFTCPGSGHCIPRSWVCDGDNDCFDQADENNCPPAVCSASQFQCANKKQCIHESYR 981
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC +DGSDE P+ QC + QC S+ CIP W CD DC D
Sbjct: 982 CDGVSDC-QDGSDEQGCPSLAPDQCDQEKSFQCKKSRVCIPKLWFCDGNADCE-----DA 1035
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQV+C + KCI +W+CD E DC DN+DED
Sbjct: 1036 SDEP----SSC--GQVECPQNHFKCNNSKCIFKSWICDGEDDCG-----DNSDEDNRHAC 1084
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCSHKC 391
C + C G + +CV +S CDGK DC NG DEGP C + EN C+H C
Sbjct: 1085 GAPKFQCEHGKWLCPGVTERCVNISSICDGKSDCPNGADEGPGCASTPCKENKAGCTHDC 1144
Query: 392 SPTPRGAMCFCPAGQNPN-KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
TP G +C CP G+ N T CVD +EC I GSC Q CTN+ S+ C+C +GY L
Sbjct: 1145 HVTPMGPLCVCPKGEVLNDSTTCVDLNECNIAGSCSQHCTNSKGSFTCACEDGYQLELKH 1204
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K C A N + A ++ S+ I +L+ S
Sbjct: 1205 K-CKATNRSE---AFLVISNRRSILVANLDTS 1232
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 157/342 (45%), Gaps = 44/342 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNA-ECTP-GQFSC------GM 214
C + C + N CV CDG DC + DE C+ EC P +F C G
Sbjct: 2416 CFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDEDVRHQCDTRECDPEREFKCTQNKQWGR 2474
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-------FNGQVQCALSKKCIPHNWLCDE 267
CIP+ W CDG DC+ DG+DE N+ +H C Q QC +++CI +W+CD
Sbjct: 2475 ATCIPKRWVCDGDPDCV-DGADE-NSTVHNCPAPEPCDVEKQYQCN-NQRCINKDWVCDH 2531
Query: 268 EMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC D +DE + F C + + C + KCI ++ CD E DC D +D
Sbjct: 2532 DNDCG-----DGSDEPRNCTFRNCSSEEFTCR-NAKCIRKSYHCDGEDDCG-----DGSD 2580
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E +K C + C + QC+ + C+ + DCS+G DE CN A E
Sbjct: 2581 E-LEKDCKKEETTCSGAQFAC-KNGQCIPYERVCNKQQDCSDGSDEPTHCNVDECAKVEM 2638
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGS-CDQTCTNTHLSYVCSCT 441
+C HKC T C C G K C D +EC + S C Q C NT SY C C+
Sbjct: 2639 NQCEHKCVNTLTSFYCECNEGYELLKDGKACADRNECRVKPSVCSQYCINTPGSYFCKCS 2698
Query: 442 EGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ Y R DG +C + D +IFS+ +R L+G+
Sbjct: 2699 QTYYDRELDGHTCKRKD---DVTPWLIFSNRYYLRNTSLDGT 2737
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 108/233 (46%), Gaps = 20/233 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E +C SS +C+ LS CD DC + DE N +C +FSC G+CIP+SWKC
Sbjct: 843 CSPREFQC-SSGRCIPLSFKCDSDNDCGDFSDETGCTNVKCDNSEFSCENGRCIPQSWKC 901
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC DGSDE + C + C Q C S CIP +W+CD + DC D DE+
Sbjct: 902 DSENDC-GDGSDEGDFCKEKTCAYYQFTCPGSGHCIPRSWVCDGDNDC-----FDQADEN 955
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C Q QCA K+CI ++ CD DC D +DE + +
Sbjct: 956 NCPPAVCSASQFQCANKKQCIHESYRCDGVSDCQ-----DGSDEQGCPSLAPDQCD-QEK 1009
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------NKADCENLKCSHK 390
+C S C+ FCDG DC + DE C N C N KC K
Sbjct: 1010 SFQCKKSRVCIPKLWFCDGNADCEDASDEPSSCGQVECPQNHFKCNNSKCIFK 1062
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ + CDG DC + DE C C+P +F C G+CIP S+KCD DC D S
Sbjct: 814 RCIPKTWVCDGDDDCLDNSDEMNNCTRNTCSPREFQCSSGRCIPLSFKCDSDNDC-GDFS 872
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE +C N + C + +CIP +W CD E DC D +DE D+ K C Q
Sbjct: 873 DETGCTNVKCDNSEFSCE-NGRCIPQSWKCDSENDCG-----DGSDEGDFCKEKTCAYYQ 926
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C S CIP +W+CD + DC D DE+ + +C ++ +C + QC+
Sbjct: 927 FTCPGSGHCIPRSWVCDGDNDC-----FDQADEN-----NCPPAVCSASQFQCANKKQCI 976
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CDG DC +G DE
Sbjct: 977 HESYRCDGVSDCQDGSDE 994
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 94/199 (47%), Gaps = 19/199 (9%)
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
F C GQ +C + CIP W CD DCS D +DE + +V C +
Sbjct: 1 FAPCNEGQFRCT-NAICIPIRWRCDGHSDCS-----DQSDER-----NCTSVTCLDTKFL 49
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
C S +C+ SK CDGK DC +G DE C++ C L C + C + G CFC G
Sbjct: 50 CPSEKKCIDKSKLCDGKQDCDDGADEKKNCSSNL-CRTLSCEYGCRASLDGGDCFCAPGM 108
Query: 407 NPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
N K CVD +EC G CDQ CTN+ S+ C C GYTL P + C A N
Sbjct: 109 TINTKDKRTCVDLNECSEWGYCDQLCTNSPGSFQCLCVRGYTLDPP-RHCKADN---SSS 164
Query: 464 ASIIFSSTVDIRRIHLNGS 482
++F+ I + +G+
Sbjct: 165 MRLLFTRHNAIYSVSADGA 183
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/386 (29%), Positives = 151/386 (39%), Gaps = 114/386 (29%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--------------NAECT 206
N C N L+C ++N CV CDG DC + DE F N C
Sbjct: 2327 NNRTCPGNHLKCETTNICVEPYWLCDGDNDCGDNSDEVAFLCSQRTCPPNSFRCPNHRCI 2386
Query: 207 PGQ-------------------------------FSCGMGKCIPESWKCDGFVDCLEDGS 235
P F+C G C+P + CDG DCL D S
Sbjct: 2387 PATWHCDGDDDCGDGADEPEDYCKSEKRTCFGDLFTCDNGNCVPRIYICDGDNDCL-DNS 2445
Query: 236 DEPNTCIHQCFNGQ------VQCALSKK-----CIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DE HQC + +C +K+ CIP W+CD + DC VD DE+
Sbjct: 2446 DE--DVRHQCDTRECDPEREFKCTQNKQWGRATCIPKRWVCDGDPDC-----VDGADEN- 2497
Query: 285 DKFHQC-------FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
H C Q QC +++CI +W+CD + DC D +DE + F +
Sbjct: 2498 STVHNCPAPEPCDVEKQYQCN-NQRCINKDWVCDHDNDCG-----DGSDEPRNCTFRN-- 2549
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C E C ++ +C+ S CDG+ DC +G DE + DC+ K T G
Sbjct: 2550 --CSSEEFTCRNA-KCIRKSYHCDGEDDCGDGSDE-----LEKDCK------KEETTCSG 2595
Query: 398 AMCFCPAGQ-NPNKTQCVDADECLIDGS------------------CDQTCTNTHLSYVC 438
A C GQ P + C +C DGS C+ C NT S+ C
Sbjct: 2596 AQFACKNGQCIPYERVCNKQQDC-SDGSDEPTHCNVDECAKVEMNQCEHKCVNTLTSFYC 2654
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPA 464
C EGY L DGK+C N + +P+
Sbjct: 2655 ECNEGYELLKDGKACADRNECRVKPS 2680
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 103/215 (47%), Gaps = 23/215 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C + +C +++ CV K CDG DC++ DE FC C F C G+C+P SW+
Sbjct: 3066 CKKGQFQCHNNSTCVPRVKICDGHNDCNDKSDE-KFCGYPCGEHNFKCRNTGRCVPVSWQ 3124
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC + ++P C HQ N Q + KCIP W CD + DC DN+DE
Sbjct: 3125 CDGDNDCTDGSDEDPAICHHQECNTDTQYKCNNGKCIPKLWYCDFDDDCG-----DNSDE 3179
Query: 283 DWDK--FHQCFNGQVQC--ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
K C G +C + +CIP CD + DC DN+DE +Y
Sbjct: 3180 PAHKCRNRNCTTGWQKCPSVTNYRCIPTWLFCDGKDDCR-----DNSDETSPEYCPK--- 3231
Query: 339 LCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CH + +C +N+C+ L CD + DC + DE
Sbjct: 3232 -CHETGDFKC-RNNRCIPLRWRCDFEDDCGDNSDE 3264
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/301 (29%), Positives = 126/301 (41%), Gaps = 60/301 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD--------SHLNTVESVRV--D 157
+E + + G NR V + P + D L+W D +H T E ++V +
Sbjct: 2903 IEFSDLDGSNRH-TVLQGRSVPHVFALSVFDDWLFWTDWNMKGVYRAHKFTGEKLQVLRN 2961
Query: 158 GSHNAVLCHP-NELR-------CGSSNQ-CVALSKFCDGK-------PDCSNGEDEGPFC 201
SH H + LR CG +N C L G PD + C
Sbjct: 2962 TSHRPYDIHVYHPLRQLDYPNPCGKTNGGCSHLCLISPGAASFQCTCPDNFILLPDNKTC 3021
Query: 202 NAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
A CT GQF CG +CI WKCDG DC DGSDE C GQ QC + C+
Sbjct: 3022 IANCTEGQFRCGGTDDRCISVFWKCDGDKDC-RDGSDEVGCPPFACKKGQFQCHNNSTCV 3080
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF--HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
P +CD DC+ D +DE KF + C +C + +C+P +W CD + DC+
Sbjct: 3081 PRVKICDGHNDCN-----DKSDE---KFCGYPCGEHNFKCRNTGRCVPVSWQCDGDNDCT 3132
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNE------LRCGSSNQCVALSKFCDGKPDCSNGED 371
D +DED +CH E +C ++ +C+ +CD DC + D
Sbjct: 3133 -----DGSDED--------PAICHHQECNTDTQYKC-NNGKCIPKLWYCDFDDDCGDNSD 3178
Query: 372 E 372
E
Sbjct: 3179 E 3179
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIP 260
N C +F+CG GKCIP W CDG DC ++ ++ + C H C + +C + +CI
Sbjct: 2204 NVSCDDTKFACGNGKCIPRLWACDGDDDCGDNTDEDKSFCAQHTCGPTEFRCG-NGRCIF 2262
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E DC D+TDE+ ++ C +G+ CA + +CIP LC+ DC
Sbjct: 2263 KTWKCDHENDCG-----DSTDEEDCEYPPCPDGEFTCA-NFRCIPKTQLCNGVNDCK--- 2313
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DN D N C N L+C ++N CV CDG DC + DE F ++
Sbjct: 2314 --DNKTSDESHANCPNNRTCPGNHLKCETTNICVEPYWLCDGDNDCGDNSDEVAFLCSQR 2371
Query: 381 DC--ENLKC-SHKCSPT 394
C + +C +H+C P
Sbjct: 2372 TCPPNSFRCPNHRCIPA 2388
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 135/336 (40%), Gaps = 66/336 (19%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C+ FCDGK DC + DE +C G F C +CIP W+CD F D D
Sbjct: 3203 RCIPTWLFCDGKDDCRDNSDETSPEYCPKCHETGDFKCRNNRCIPLRWRCD-FEDDCGDN 3261
Query: 235 SDEPNT----CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
SDE T C + QCA +KKCIP W CD + DC D +DE ++C
Sbjct: 3262 SDEDGTMCAELYRDCSESEFQCA-NKKCIPSRWRCDHDNDCE-----DGSDEKDCLNYEC 3315
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD---------EDWDKYFSHNAVLCH 341
Q +C S CI +CD DC D+ D + D + +N V
Sbjct: 3316 KENQFKCT-SGHCILKRLVCDGNKDCH--DVSDELNCPTRFPGGLYCQDMFQCNNTVCIR 3372
Query: 342 PN-----------------------------ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P+ + +C +N+C+ L + C+G DC +G DE
Sbjct: 3373 PDFMCDGDDDCGDFSDEADSICKDHKCDVTRKFQC-QNNKCIPLWQLCNGNDDCGDGSDE 3431
Query: 373 G--PFCNNKADCENLKCSHKCSP---TPRGAMCFCP--AGQNPNKTQCVDAD-ECLIDGS 424
C A L KC+ PR +C G ++ C + + G+
Sbjct: 3432 NNHQLCGKLAPLPCLATEFKCTNGKCVPRMDVCNHEDDCGDLSDERGCHEGTCDATSRGN 3491
Query: 425 CDQTCTNTHLS--YVCSCTEGYTLRPDG-KSCTAVN 457
C+ CT + Y+C+C GY ++ D K C +N
Sbjct: 3492 CEHNCTTLGDANGYICTCANGYKIKEDDPKRCEDIN 3527
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 11/186 (5%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPES 221
V C + CG+ L N +++ FC C P +F CG G+CI ++
Sbjct: 2205 VSCDDTKFACGNGKCIPRLWACDGDDDCGDNTDEDKSFCAQHTCGPTEFRCGNGRCIFKT 2264
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
WKCD DC D +DE + C +G+ CA + +CIP LC+ DC + D +
Sbjct: 2265 WKCDHENDC-GDSTDEEDCEYPPCPDGEFTCA-NFRCIPKTQLCNGVNDCKDNKTSDESH 2322
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ C ++C + C+ WLCD + DC DN+DE F + C
Sbjct: 2323 ANCPNNRTCPGNHLKCETTNICVEPYWLCDGDNDCG-----DNSDE---VAFLCSQRTCP 2374
Query: 342 PNELRC 347
PN RC
Sbjct: 2375 PNSFRC 2380
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 141/327 (43%), Gaps = 30/327 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C ++ +C+ CD DC +G DE N EC QF C G CI + C
Sbjct: 3276 CSESEFQC-ANKKCIPSRWRCDHDNDCEDGSDEKDCLNYECKENQFKCTSGHCILKRLVC 3334
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC D SDE N F G + C +C + + M DD D +DE
Sbjct: 3335 DGNKDC-HDVSDELNCPTR--FPGGLYCQDMFQCNNTVCIRPDFMCDGDDDCGDFSDEAD 3391
Query: 285 D--KFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-C 340
K H+C + QC + KCIP LC+ DC D +DE+ + A L C
Sbjct: 3392 SICKDHKCDVTRKFQCQ-NNKCIPLWQLCNGNDDCG-----DGSDENNHQLCGKLAPLPC 3445
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL-KCSHKCSPT--PRG 397
E +C ++ +CV C+ + DC + DE D + C H C+ G
Sbjct: 3446 LATEFKC-TNGKCVPRMDVCNHEDDCGDLSDERGCHEGTCDATSRGNCEHNCTTLGDANG 3504
Query: 398 AMCFCPAG---QNPNKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+C C G + + +C D +EC G +C Q C N Y C C +GY + C
Sbjct: 3505 YICTCANGYKIKEDDPKRCEDINECATFGHNCSQICENLMGDYGCRCRDGYEMFK--SHC 3562
Query: 454 TAVNVPQDEPASII-FSSTVDIRRIHL 479
A PA II +++ D+R + +
Sbjct: 3563 HAKG-----PAPIILYTNGPDVRMLDM 3584
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 108/273 (39%), Gaps = 77/273 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E RCG+ +C+ + CD + DC + DE C G+F+C +CIP++ C
Sbjct: 2248 CGPTEFRCGNG-RCIFKTWKCDHENDCGDSTDEEDCEYPPCPDGEFTCANFRCIPKTQLC 2306
Query: 225 DGFVDCLEDG-SDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+G DC ++ SDE PN C ++C + C+ WLCD + DC D
Sbjct: 2307 NGVNDCKDNKTSDESHANCPNN--RTCPGNHLKCETTNICVEPYWLCDGDNDCG-----D 2359
Query: 279 NTDE-------------------------DW--------------------DKFHQCFNG 293
N+DE W + CF
Sbjct: 2360 NSDEVAFLCSQRTCPPNSFRCPNHRCIPATWHCDGDDDCGDGADEPEDYCKSEKRTCFGD 2419
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH--NAVLCHP-NELRCGSS 350
C + C+P ++CD + DC +DN+DED H + C P E +C +
Sbjct: 2420 LFTCD-NGNCVPRIYICDGDNDC-----LDNSDED----VRHQCDTRECDPEREFKCTQN 2469
Query: 351 NQ-----CVALSKFCDGKPDCSNGEDEGPFCNN 378
Q C+ CDG PDC +G DE +N
Sbjct: 2470 KQWGRATCIPKRWVCDGDPDCVDGADENSTVHN 2502
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 142/382 (37%), Gaps = 52/382 (13%)
Query: 27 EEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLR 83
E + S ++ V+ DW + Y+ GT + N + + + ++ +
Sbjct: 544 ENVLASQNEGVEGLALDWVSHNLYYIDSRKGTLNVISVKNFQYRRTLLKNLKRPRAIVVH 603
Query: 84 CAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
+ + WD PA + +A + G N + WP+ L ID+ D LYW
Sbjct: 604 PNKGYVFYSEWDRPA--------NISRAYLDGTNVMVFRGVLLGWPNGLSIDFQTDRLYW 655
Query: 144 CDSHLNTVESVRVDGS-----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDC------S 192
CD+ L+ ++ +DG+ ++ + HP L V D + D +
Sbjct: 656 CDALLDHIQHANLDGTDVQTINSPRIKHPFSLVIHGDWLFVT-----DWRLDAILMMHKT 710
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-- 250
G DE E G G+ E+ K D C + C NG
Sbjct: 711 TGADEKIVTTVE--EGSRLYGIKVYSRENQKVDSRHPCQFNNGGCQKLCFPVPSNGSQGP 768
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
+S C L + C +D + C N +++CIP W+C
Sbjct: 769 DLVVSCGCPYGEQLSKDNRTCVSDPTAE------PPVQACPNTWDFTCDNQRCIPKTWVC 822
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D + DC +DN+DE + C P E +C SS +C+ LS CD DC +
Sbjct: 823 DGDDDC-----LDNSDE----MNNCTRNTCSPREFQC-SSGRCIPLSFKCDSDNDCGDFS 872
Query: 371 DEGPFCNNKAD-----CENLKC 387
DE N K D CEN +C
Sbjct: 873 DETGCTNVKCDNSEFSCENGRC 894
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M G R +V + +P+ L IDY D +YWCDS LNT+E+ + DGS+ VL
Sbjct: 3721 KIETAWMDGSKRRIIVGDKVGYPTGLTIDYASDHRVYWCDSKLNTIETSKQDGSNRVVL 3779
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A C GQF C CIP W+CDG DC D SDE N C + + C KKCI +
Sbjct: 2 APCNEGQFRCTNAICIPIRWRCDGHSDC-SDQSDERNCTSVTCLDTKFLCPSEKKCIDKS 60
Query: 263 WLCDEEMDC 271
LCD + DC
Sbjct: 61 KLCDGKQDC 69
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 108 LEKAGMHGEN--RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+ + G+ G N R L + WP++L IDY D L+W D+HL+ +E +DGS+ +
Sbjct: 2858 IGRMGLDGSNFTRIVLYENKLVWPNALTIDYFSDKLFWADAHLDYIEFSDLDGSNRHTV- 2916
Query: 166 HPNELRCGSSNQCVALSKFCD 186
L+ S ALS F D
Sbjct: 2917 ----LQGRSVPHVFALSVFDD 2933
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 136/372 (36%), Gaps = 64/372 (17%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKA + G NR P+V I P L ID +YW DS + V+ V G +
Sbjct: 1985 KIEKAYLDGTNRVPIVVTGISNPRDLTIDIVTHDVYWVDSREDAVQKVAFSGGSRQYVRK 2044
Query: 167 --PNELRCGSSNQCV-----------ALSKFCDG--------KPDCSNGEDEGPFCNAEC 205
PN + S Q V SKF K D + D F ++
Sbjct: 2045 NLPNPMGVAVSGQYVYWADRNLRTIYRASKFPSNTSTPAEPVKSDLNMLRDIVVFDSSNQ 2104
Query: 206 TPGQFSCGMGKC------IPES-----WKCD-GFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
P C C +PE+ WKC + DG + + F + +
Sbjct: 2105 PPASSPCSTRPCDQLCFAMPEAFNSTKWKCGCASGELAPDGRKCDISKVFLVFTTRREIR 2164
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHN 307
S PH + + ++V + DK V C +K KCIP
Sbjct: 2165 -SLFMDPHKTNVPFQPRGNLTNVVGLDFDYADKRMYFTPENVSCDDTKFACGNGKCIPRL 2223
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W CD + DC NTDED H C P E RCG+ +C+ + CD + DC
Sbjct: 2224 WACDGDDDCGD-----NTDEDKSFCAQHT---CGPTEFRCGNG-RCIFKTWKCDHENDCG 2274
Query: 368 NGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLID 422
+ DE P + + C N +C P+ +C NKT +DE +
Sbjct: 2275 DSTDEEDCEYPPCPDGEFTCANFRC------IPKTQLCNGVNDCKDNKT----SDESHAN 2324
Query: 423 GSCDQTCTNTHL 434
++TC HL
Sbjct: 2325 CPNNRTCPGNHL 2336
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E G+ G R +V I WP+ L +D +Y+ DS L+ ++ DGS
Sbjct: 1353 RVESVGLDGTMRKTIVHTKIYWPNGLTLDLPNKRIYFADSKLDYIDFCNYDGSGRQQVLA 1412
Query: 160 HNAVLCHPNEL 170
HN L HP+ L
Sbjct: 1413 HNHYLLHPHSL 1423
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
F + +++A M G +RS +VT I + L +DY L WCDS L+ + +V GS+
Sbjct: 293 FFSDGDHIDRAHMDGSHRSTVVTA-IYKATGLTVDYVTKFLVWCDSQLDQIVAVDYTGSN 351
Query: 161 NAVL 164
++
Sbjct: 352 RNII 355
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C+ + RC ++ C+ + CDG DCS+ DE + C +F C KCI +S
Sbjct: 4 CNEGQFRC-TNAICIPIRWRCDGHSDCSDQSDERNCTSVTCLDTKFLCPSEKKCIDKSKL 62
Query: 224 CDGFVDCLEDGSDEPNTC 241
CDG DC +DG+DE C
Sbjct: 63 CDGKQDC-DDGADEKKNC 79
>gi|195123466|ref|XP_002006227.1| GI18681 [Drosophila mojavensis]
gi|193911295|gb|EDW10162.1| GI18681 [Drosophila mojavensis]
Length = 4639
Score = 161 bits (407), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 104/226 (46%), Positives = 124/226 (54%), Gaps = 22/226 (9%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CIP W CD E DC D +DE D K +C GQ +C S KCIP NW+CD E D
Sbjct: 19 CIPMRWKCDSEPDCK-----DGSDETSDCAKSPKCNEGQFRCGQSLKCIPSNWVCDGEYD 73
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DI D T K A C E C + C+ LS+FCDG DC N E +
Sbjct: 74 CGKGDISDET-----KCPDSVAAKCRAFEAEC-HNGACLELSRFCDGHWDCDNDELQ--- 124
Query: 376 CNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTN 431
C+ + C L CS+ C TP+GA C+CPAGQ P N T+CVD DEC + G+CDQ C N
Sbjct: 125 CDKQNVACAALNCSYNCKLTPQGARCYCPAGQVPESANSTRCVDYDECSVPGTCDQQCRN 184
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
T SY CSC GYT + G C A+NVP EPA++ S IRRI
Sbjct: 185 TPGSYECSCISGYTKQ--GSHCRAINVPPSEPATLSLLSVGTIRRI 228
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 124/409 (30%), Positives = 163/409 (39%), Gaps = 110/409 (26%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIPESWKCDGFV 228
C +S C+ S CDG+PDC +G DE N A C GQF C G+CI W+CDG
Sbjct: 2659 CENSTLCIMHSWRCDGEPDCPDGTDELNCSNSTRASCELGQFRCANGRCIAAGWRCDGEN 2718
Query: 229 DCLED----GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC+++ GSDE N C C Q C CIP +W CD + DC D TDE
Sbjct: 2719 DCMDNVGDKGSDELN-CRTSCQVNQFSC--DDGCIPSSWQCDGKSDCK-----DGTDEGP 2770
Query: 285 D-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--------------------------- 316
C QC S +CIP W+CD E DC
Sbjct: 2771 QCPNRSCRAHLFQCKSSGRCIPQKWVCDGEKDCPSNGDQGSEDEGPHCGGVAHIPDCQPP 2830
Query: 317 ----STDDIVD-----NTDED---WDKYFSHNAVLCHPNELRCGS------SNQCVALSK 358
ST +D + DED D + L HP+ G+ + C+ ++
Sbjct: 2831 AFLCSTGQCIDSHYVCDGDEDCPGGDDEYDGCEPLYHPHACPGGALMHHCQDSMCIFKNQ 2890
Query: 359 FCDGKPDCSNGEDEGP---------------------------FCNNKADCENLK----- 386
CDGKPDC +G DE P C+ + DC +
Sbjct: 2891 TCDGKPDCGDGSDELPSLCMHTRACNGADDFRCKNGACISADLLCDRRNDCGDFSDEELC 2950
Query: 387 ----------CSHKCSPTPRGAMCFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTH 433
C H+C G C C G + C D DEC C QTC NT+
Sbjct: 2951 NENECLNADICEHECVDKVVGYECRCRPGYKVLPKSPHLCTDIDECAEQQPCSQTCINTY 3010
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY C C +GY LR D +C A + + +IFS+ IR+++ G+
Sbjct: 3011 GSYKCLCAKGYELR-DHHTCKATS---NVTMKLIFSNRYYIRQVNHTGN 3055
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 155/332 (46%), Gaps = 26/332 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC----SNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C+ NE C S +C+ L+ DG DC S+ E F ++C +F CG G+C
Sbjct: 962 CNSNEFACEKSGRCIQLTWVNDGVIDCGPDDSSDESFDLFLGSKCP--EFDCGNGRCRQF 1019
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIV 277
S CDG +C + +DE C H+C +G+ C C +CD DC S +
Sbjct: 1020 SDICDGLDNC-GNNADE-FACEHECGHGERYCR-PIGCYGDMHICDGVNDCEDFSDEAKC 1076
Query: 278 DNTDED------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWD 330
+ T D W + +C + C+ +CIP CD C D V+ T
Sbjct: 1077 NQTKSDNHPLGGWKELDECAPFEFACSDPFECIPEFLRCDGINHCFDKTDEVNCTQLHPS 1136
Query: 331 KYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
K+ + V+C HP+ L CG SN+C+ +S+ CDG DC + DEG C ++ +CSH
Sbjct: 1137 KFDMNETVICEHPDRL-CGFSNKCITVSQLCDGHNDCEDTTDEGFLCADELCNHGHECSH 1195
Query: 390 KCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C TP G +C CP PN +C C +C Q C ++ Y C C EGY L
Sbjct: 1196 NCHNTPEGYICSCPPHLYLQPNGKRCSMQHACEHWDTCSQVCESSGKGYACQCLEGYDLA 1255
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
D +C + DEP +IF+ DIR I+L
Sbjct: 1256 YDKFTCKS--TAPDEPY-VIFTDRQDIRGINL 1284
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 159/364 (43%), Gaps = 77/364 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIP 219
V C PN+ +C +S +C+ L+ CD + DC NGEDE P C+ A C P F C KCIP
Sbjct: 3508 VSCGPNDFQC-NSGRCIPLTWRCDDEVDCPNGEDEPPSCHTSKATCDPTYFKCNNSKCIP 3566
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N + C + +C + KCI H++ CD E+ C S+D+I
Sbjct: 3567 GRWRCDYENDC-GDGSDELNCQMRNCSESEFRCG-TGKCIKHDFRCDGEIHCDDSSDEIN 3624
Query: 278 DNTDEDWDKF-----HQCFNGQVQCAL-----------------------SKKCIPHNWL 309
N ++F + C N Q QC + KCI W
Sbjct: 3625 CNITCKPNQFKCAAFNTCINKQYQCDGDDDCPDGSDEVNCTCPPDHFTCGNGKCIMSRWK 3684
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD DD +D +DE +D + V CH N +C + C+ S CDG DC N
Sbjct: 3685 CD-----GWDDCLDGSDESYD---TCAHVHCHYNAFKCANL-LCIRKSALCDGVNDCGNN 3735
Query: 370 EDEG-------PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECL- 420
EDE P C +++ CEN C K F GQ C+D + +
Sbjct: 3736 EDESDQVCAALPKCRHDQFQCENDDCISK---------NFRCDGQ----YNCIDGSDEMN 3782
Query: 421 ------IDGSCDQTCTNTHLS-YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
G+C Q C Y C CT GY + K+ T + D+ ++ +S +
Sbjct: 3783 CQPPVCGFGTCSQICIEKKAGHYNCKCTTGY-YKGGAKNATCLASGPDQ--ILLLASEQE 3839
Query: 474 IRRI 477
R I
Sbjct: 3840 FRFI 3843
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 113/238 (47%), Gaps = 26/238 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C +++C+A + CDG C +G DE +C P QF CG G+CI S+ C
Sbjct: 2572 CPENYFMC-QNHRCIAQEQTCDGLQQCGDGSDESTLL-CKCQPEQFRCGSGECISRSFVC 2629
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQV---QCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC D SDE + C G C S CI H+W CD E DC D TD
Sbjct: 2630 DNMRDC-RDFSDEKHCAQRTCEQGDTLFEHCENSTLCIMHSWRCDGEPDCP-----DGTD 2683
Query: 282 E---DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
E C GQ +CA + +CI W CD E DC D++ D ++ + S
Sbjct: 2684 ELNCSNSTRASCELGQFRCA-NGRCIAAGWRCDGENDC-MDNVGDKGSDELNCRTS---- 2737
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCSP 393
C N+ C + C+ S CDGK DC +G DEGP C N++ +L K S +C P
Sbjct: 2738 -CQVNQFSC--DDGCIPSSWQCDGKSDCKDGTDEGPQCPNRSCRAHLFQCKSSGRCIP 2792
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 117/246 (47%), Gaps = 27/246 (10%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMG 215
DG C C ++ +C+ CD + DC +G DE C C PGQ+ CG
Sbjct: 3339 DGRTCRANCTAAHFECVNTYKCIPFYWRCDTQDDCGDGSDEPETCPPFHCEPGQYQCGNK 3398
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL----SKKCIPHNWLCDEEMDC 271
KCI S CDG C D SDE N CF ++C S C+ CD DC
Sbjct: 3399 KCIHPSAICDGVNQC-GDSSDELNCDKFTCFENHLKCEATGNSSAFCVDSVKRCDGVRDC 3457
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+ DE C Q QC + +C+P+ W+CD ++DC+ D D T+ D
Sbjct: 3458 PGGE-----DEAGCTPLVCKKDQFQCG-NNRCMPYVWVCDGDIDCA--DKSDETNCD--- 3506
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCE--NLKCS 388
V C PN+ +C +S +C+ L+ CD + DC NGEDE P C+ +KA C+ KC+
Sbjct: 3507 -----HVSCGPNDFQC-NSGRCIPLTWRCDDEVDCPNGEDEPPSCHTSKATCDPTYFKCN 3560
Query: 389 H-KCSP 393
+ KC P
Sbjct: 3561 NSKCIP 3566
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 165 CHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N L+C SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3427 CFENHLKCEATGNSSAFCVDSVKRCDGVRDCPGGEDEAGCTPLVCKKDQFQCGNNRCMPY 3486
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD+E+DC +
Sbjct: 3487 VWVCDGDIDC-ADKSDETNCDHVSCGPNDFQCN-SGRCIPLTWRCDDEVDCPNGE----- 3539
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ C + C + KCIP W CD E DC D +DE +
Sbjct: 3540 ----DEPPSCHTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3585
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ CDG+ C + DE
Sbjct: 3586 CQMRNCSESEFRCGTG-KCIKHDFRCDGEIHCDDSSDE 3622
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 127/329 (38%), Gaps = 60/329 (18%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+ G NR +V + + + D+L+W D L+
Sbjct: 2390 TLDLEHQQLYWADARLDKIERVNYDGTNR--VVLAHTTPKHAFAMAVYGDLLFWTDWVLH 2447
Query: 150 TVESVRVDGSHNAVLCHPNELRCGS------------SNQCVALSKFC--------DGKP 189
V + + N R +NQC L+ C DG
Sbjct: 2448 AVVRANKYTGTDVLFLRENVARPMGIIAVQNSSINCDANQCKILNGLCEDVCILSKDGLA 2507
Query: 190 DCSNGED----EGPFCNA----ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNT 240
C + +G C A C Q++C G+CIP CD CL DGSDE N
Sbjct: 2508 SCHCTQGVLAPDGRRCIAPMHTNCGKSQYNCHSGECIPLELTCDNVTHCL-DGSDELRNY 2566
Query: 241 C-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
C I +C C + +CI CD C D +DE +C Q +C
Sbjct: 2567 CVIRKCPENYFMCQ-NHRCIAQEQTCDGLQQCG-----DGSDES-TLLCKCQPEQFRCG- 2618
Query: 300 SKKCIPHNWLCDEEMDCS----TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
S +CI +++CD DC T E D F H C +S C+
Sbjct: 2619 SGECISRSFVCDNMRDCRDFSDEKHCAQRTCEQGDTLFEH-----------CENSTLCIM 2667
Query: 356 LSKFCDGKPDCSNGEDEGPFCNN-KADCE 383
S CDG+PDC +G DE N+ +A CE
Sbjct: 2668 HSWRCDGEPDCPDGTDELNCSNSTRASCE 2696
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 9/119 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG-KCIPES 221
C P+ C + C+ + CD +PDC +G DE C + +C GQF CG KCIP +
Sbjct: 7 CLPSYFTC-NDGSCIPMRWKCDSEPDCKDGSDETSDCAKSPKCNEGQFRCGQSLKCIPSN 65
Query: 222 WKCDGFVDCLE-DGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W CDG DC + D SDE P++ +C + +C + C+ + CD DC D++
Sbjct: 66 WVCDGEYDCGKGDISDETKCPDSVAAKCRAFEAECH-NGACLELSRFCDGHWDCDNDEL 123
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 122/344 (35%), Gaps = 65/344 (18%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGKCIPESWKC 224
+C S+ QC+ CDG DC +G DE C P F C G+C + C
Sbjct: 884 QCRSTGQCIDGKDLCDGFEDCDDGSDESNDTQGPCNPQTCDKKLHFVCN-GRCYQRALLC 942
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI-------- 276
C DGSD+ N + C + + C S +CI W+ D +DC DD
Sbjct: 943 SSIAYC-SDGSDQLNCEHNTCNSNEFACEKSGRCIQLTWVNDGVIDCGPDDSSDESFDLF 1001
Query: 277 ------------------------VDNTDEDWDKF---HQCFNGQVQCALSKKCIPHNWL 309
+DN + D+F H+C +G+ C C +
Sbjct: 1002 LGSKCPEFDCGNGRCRQFSDICDGLDNCGNNADEFACEHECGHGERYCR-PIGCYGDMHI 1060
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSH------NAVLCHPNELRCGSSNQCVALSKFCDGK 363
CD DC +D D + K +H C P E C +C+ CDG
Sbjct: 1061 CDGVNDC--EDFSDEAKCNQTKSDNHPLGGWKELDECAPFEFACSDPFECIPEFLRCDGI 1118
Query: 364 PDCSNGEDE---GPFCNNKADC-ENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVD---- 415
C + DE +K D E + C H C + C D
Sbjct: 1119 NHCFDKTDEVNCTQLHPSKFDMNETVICEHPDRLCGFSNKCITVSQLCDGHNDCEDTTDE 1178
Query: 416 ----ADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
ADE G C C NT Y+CSC L+P+GK C+
Sbjct: 1179 GFLCADELCNHGHECSHNCHNTPEGYICSCPPHLYLQPNGKRCS 1222
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 123/328 (37%), Gaps = 102/328 (31%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ KAGM G ++ +N+ WP++L I +
Sbjct: 3177 IGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3236
Query: 138 -----------------QDILYWCDSHLNTVESV-RVDGSHNAVLC----HPNELRCGSS 175
+D +YW D ++E + DG + + L P +LR
Sbjct: 3237 SINPSLNLHHIFAIAVWEDRIYWSDWETKSIEYCNKYDGQNCSTLITTIHRPMDLR---- 3292
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC---DGFVDCLE 232
+ +P N P +A C+ + + P +KC + FV E
Sbjct: 3293 ----VFHPYRQQQPISGN-----PCLHANCS----TLCLLSPEPPYYKCACPNNFV-LAE 3338
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQC 290
DG TC C +C + KCIP W CD + DC D +DE FH C
Sbjct: 3339 DG----RTCRANCTAAHFECVNTYKCIPFYWRCDTQDDCG-----DGSDEPETCPPFH-C 3388
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRC-- 347
GQ QC +KKCI + +CD C D++DE + DK+ C N L+C
Sbjct: 3389 EPGQYQCG-NKKCIHPSAICDGVNQCG-----DSSDELNCDKF------TCFENHLKCEA 3436
Query: 348 --GSSNQCVALSKFCDGKPDCSNGEDEG 373
SS CV K CDG DC GEDE
Sbjct: 3437 TGNSSAFCVDSVKRCDGVRDCPGGEDEA 3464
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 126/328 (38%), Gaps = 68/328 (20%)
Query: 95 DLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A I+ D RL E+ + G R L+ P ++V + ++YW D+ +T+
Sbjct: 726 DRRAKRIYWCDFRLGTIERMKLDGTGRELLLKSEQLHPFAIV--QHNGVVYWVDNINSTI 783
Query: 152 ---------------ESVRVDGSHNAVLCHPNELRCG---SSNQCVALSKFCDGK----- 188
+V + S NAV ++ ++ ALSK C G
Sbjct: 784 WRFHVHHANMTSTFSSTVHLQPSGNAVDLRVFDVATQPLPATPSSCALSK-CPGMCLNTP 842
Query: 189 -------PDCSNGEDEGPFCNAECTPGQFSC-------------GMGKCIPESWKCDGFV 228
PD G C + TP + G+CI CDGF
Sbjct: 843 KGAICRCPDGYTLNGTGTHCIPQLTPSTVTAPARSNCSSGHQCRSTGQCIDGKDLCDGFE 902
Query: 229 DCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC +DGSDE N C Q + ++ + +C LC CS D +D+
Sbjct: 903 DC-DDGSDESNDTQGPCNPQTCDKKLHFVCNGRCYQRALLCSSIAYCS-----DGSDQLN 956
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ + C + + C S +CI W+ D +DC D D++DE +D + E
Sbjct: 957 CEHNTCNSNEFACEKSGRCIQLTWVNDGVIDCGPD---DSSDESFDLFLGSKCP-----E 1008
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CG+ +C S CDG +C N DE
Sbjct: 1009 FDCGNG-RCRQFSDICDGLDNCGNNADE 1035
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 111/302 (36%), Gaps = 62/302 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A + G ++ +I+ P++L +D LYW D+ L+ +E V DG++ VL H
Sbjct: 2365 IQRAYLTGYGVERIIRTDIKMPNALTLDLEHQQLYWADARLDKIERVNYDGTNRVVLAHT 2424
Query: 168 NELRCGSSNQCVALSKFCD------------GKPDCSNGED--------EGPFCNAECTP 207
+ A++ + D + + G D P
Sbjct: 2425 ------TPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLFLRENVARPMGIIAVQN 2478
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDG-----------SDEPNTCIH----QCFNGQVQC 252
+C +C + C+ +DG + + CI C Q C
Sbjct: 2479 SSINCDANQCKILNGLCEDVCILSKDGLASCHCTQGVLAPDGRRCIAPMHTNCGKSQYNC 2538
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLC 310
S +CIP CD C +D +DE ++ +C C + +CI C
Sbjct: 2539 H-SGECIPLELTCDNVTHC-----LDGSDELRNYCVIRKCPENYFMCQ-NHRCIAQEQTC 2591
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D C D +DE S C P + RCGS +C++ S CD DC +
Sbjct: 2592 DGLQQCG-----DGSDE------STLLCKCQPEQFRCGSG-ECISRSFVCDNMRDCRDFS 2639
Query: 371 DE 372
DE
Sbjct: 2640 DE 2641
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL IDY LYW D T+E+ R++G V
Sbjct: 3982 LENGILVASLDGTNKKSLVERDVGWPISLSIDYPTGRLYWADYRKGTIETCRLNGKERNV 4041
Query: 164 L 164
+
Sbjct: 4042 V 4042
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+ M GE R + T + WP+ L +DY Q +YW D+ +++ S + DGS + V
Sbjct: 1414 RIERCSMAGEGRRTISTNWQLSAGWPNGLTLDYTQKRVYWVDAKSDSICSTKYDGSEHHV 1473
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1474 VLRSKEM 1480
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 24/130 (18%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP-----APEIFPLDERL-- 108
+TLA E HRN++LC +Q+ +S + ++C +I+D +W LP +P ++ RL
Sbjct: 248 YTLAYEVWHRNRTLCMLQK--MSELVIQCQRIDDANVNWTLPVSAFNSPHQIFVEMRLDW 305
Query: 109 ---------EKAGM-----HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
E GM + L+ + ++ PSSLV+D + L++ D + ++
Sbjct: 306 LSGNWYFLNEDDGMVYLCSNAVTFCRLILQQVEQPSSLVLDPTKGYLFYTDWSPSLSRAL 365
Query: 155 RVDGSHNAVL 164
+DGS+ L
Sbjct: 366 -LDGSNRTTL 374
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 40
+C GQ +C S KCIP NW+CD E DC DI D T
Sbjct: 47 KCNEGQFRCGQSLKCIPSNWVCDGEYDCGKGDISDET 83
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 111 AGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
A M G ++ L +++WP SL +D +YWCD L T+E +++DG+ +L
Sbjct: 698 AWMDGTHKELLAKSTEELSMRWPRSLDVDRRAKRIYWCDFRLGTIERMKLDGTGRELLLK 757
Query: 167 PNEL 170
+L
Sbjct: 758 SEQL 761
>gi|292613604|ref|XP_707254.3| PREDICTED: low-density lipoprotein receptor-related protein 2
isoform 5 [Danio rerio]
Length = 1355
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/294 (37%), Positives = 146/294 (49%), Gaps = 22/294 (7%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
RC + +CV S CDG PDC +G DE C+ ++ C G+C+ S +CDG DC
Sbjct: 273 RCDENTRCVPESFVCDGDPDCVDGSDEANCGEESCSSAEWQCSSGQCVSLSMRCDGHSDC 332
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFH 288
D SDE + + +C S +C+ W+CD E DC D TDE +
Sbjct: 333 -RDHSDEEDCAEPPPCSTNRRCPKSHECLLDEWMCDGETDCK-----DGTDEKNCKESPV 386
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
QC Q C+ +CIP +W CD DC D +DE + +V C P+ +CG
Sbjct: 387 QCGEYQFSCSSKTQCIPQSWRCDGSEDCR-----DGSDES-----ACASVSCPPHLFQCG 436
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP 408
SS +CV S+ C+G +C +G DEG C + E LKC+ C TP GA C C G P
Sbjct: 437 SS-ECVEFSQLCNGVTNCLDGSDEGGSCQTEKCSEQLKCAQDCHSTPAGARCGCRMGYKP 495
Query: 409 --NKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
+ +C D DEC+ + C C NT S+ CSC+ GY L PDG SC P
Sbjct: 496 VDDGLRCADVDECVERPNICSHRCNNTLGSFQCSCSHGYVLEPDGHSCKITGEP 549
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 109/277 (39%), Gaps = 94/277 (33%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK--------------- 216
C + CV + CDG+ DC +G DE C C+ G F C GK
Sbjct: 43 CEDRSGCVLNTHLCDGENDCDDGSDEDN-CPTVCSVGHFQCAHGKMCIWLRQVCDGVPQC 101
Query: 217 -------------------------CIPESWKCDGFVDCLEDGSDEPN------------ 239
C+PES+ CDG VDC+ DGSDE N
Sbjct: 102 QDRSDELNCFKPDDGCAHRCDGNTRCVPESFVCDGDVDCV-DGSDEANCEENPDDDDDDD 160
Query: 240 ----------TCIHQ------CFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDI 276
T H+ G ++C+++ K C+ N +CD E+DC
Sbjct: 161 EDLLDEKEEMTGEHEVSQNVPATKGPLRCSIASKLCRDGTDCVMLNHVCDGELDCK---- 216
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE+ D QC +GQ QCA KKCI LCD C D +DE F +
Sbjct: 217 -DGSDEE-DCPVQCESGQFQCAHGKKCIDRRQLCDGVPQCQ-----DRSDE--LNCFKPD 267
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H RC + +CV S CDG PDC +G DE
Sbjct: 268 DDCAH----RCDENTRCVPESFVCDGDPDCVDGSDEA 300
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 102/242 (42%), Gaps = 63/242 (26%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFC-----------------------N 202
RC + +CV S CDG DC +G DE P N
Sbjct: 120 RCDGNTRCVPESFVCDGDVDCVDGSDEANCEENPDDDDDDDEDLLDEKEEMTGEHEVSQN 179
Query: 203 AECTPGQFSCGMGK--------CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL 254
T G C + C+ + CDG +DC +DGSDE + C QC +GQ QCA
Sbjct: 180 VPATKGPLRCSIASKLCRDGTDCVMLNHVCDGELDC-KDGSDEED-CPVQCESGQFQCAH 237
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLC 310
KKCI LCD C D +DE CF CA + +C+P +++C
Sbjct: 238 GKKCIDRRQLCDGVPQCQ-----DRSDE-----LNCFKPDDDCAHRCDENTRCVPESFVC 287
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D + DC VD +DE + C E +C SS QCV+LS CDG DC +
Sbjct: 288 DGDPDC-----VDGSDE-----ANCGEESCSSAEWQC-SSGQCVSLSMRCDGHSDCRDHS 336
Query: 371 DE 372
DE
Sbjct: 337 DE 338
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C + C S QC+ S CDG DC +G DE + C P F CG +C+ S
Sbjct: 386 VQCGEYQFSCSSKTQCIPQSWRCDGSEDCRDGSDESACASVSCPPHLFQCGSSECVEFSQ 445
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
C+G +CL DGSDE +C + + Q++CA
Sbjct: 446 LCNGVTNCL-DGSDEGGSCQTEKCSEQLKCA 475
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+AGM G +R LV+K+++WP SL +D +YW D L + S +DG +L
Sbjct: 689 EAQIERAGMDGSDRRVLVSKSLRWPVSLTVDSLHQRIYWTDEKLKCIGSANIDGGDVKLL 748
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 54/112 (48%), Gaps = 23/112 (20%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-------------CTPG 208
+V C P+ +CGSS +CV S+ C+G +C +G DEG C E TP
Sbjct: 425 SVSCPPHLFQCGSS-ECVEFSQLCNGVTNCLDGSDEGGSCQTEKCSEQLKCAQDCHSTPA 483
Query: 209 QFSCG--MG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN--GQVQCALS 255
CG MG K + + +C +C+E PN C H+C N G QC+ S
Sbjct: 484 GARCGCRMGYKPVDDGLRCADVDECVE----RPNICSHRCNNTLGSFQCSCS 531
>gi|321476336|gb|EFX87297.1| hypothetical protein DAPPUDRAFT_43397 [Daphnia pulex]
Length = 4507
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/379 (33%), Positives = 167/379 (44%), Gaps = 94/379 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C +S +C+ S CD DC + DE N C QF+C G+CIP +WKC
Sbjct: 941 CSTDEFQC-TSGRCIPNSFRCDSDNDCGDSSDETGCVNVTCDASQFTCDNGRCIPPTWKC 999
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC DGSDE + C + C Q C S CIP +W+CD + DC DN DE+
Sbjct: 1000 DSENDC-GDGSDEGDFCAERTCAYFQFTCPRSGHCIPQSWVCDGDNDC-----FDNKDEE 1053
Query: 284 W-------DKFHQCFNG-------------------------------------QVQCAL 299
+ +C NG Q CA
Sbjct: 1054 GCPPITCSAQQLKCGNGKQCVHESYKCDGIPDCDDGSDEVGCPSLAPDQCNEEKQFNCAR 1113
Query: 300 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 324
S CIP W CD DC DD D
Sbjct: 1114 SGVCIPRAWHCDGTKDCEDGSDEPDTCGEVNCGKDYFKCNNSRCVINTMVCNGQDDCGDG 1173
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+DED S C + +C +++C+ +++ CDGK DC +G DEGP C+ K DCE
Sbjct: 1174 SDEDDRHACSRPPFQCPAGQWQCPRVTDRCINVTQVCDGKRDCPSGSDEGPGCDTK-DCE 1232
Query: 384 N--LKCSHKCSPTPRGAMCFCPAGQN--PNKTQ-CVDADECLIDGSCDQTCTNTHLSYVC 438
+ CS+ C TP G +C CP G+ N T+ CVD DEC GSC Q+C NT +++C
Sbjct: 1233 DHGASCSNGCMQTPAGPLCLCPPGEVLLANDTKACVDLDECQFPGSCSQSCRNTKATFIC 1292
Query: 439 SCTEGYTLRPDGKSCTAVN 457
SC+EGY L D +C A+N
Sbjct: 1293 SCSEGYLLEEDKHTCKAIN 1311
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/258 (36%), Positives = 127/258 (49%), Gaps = 31/258 (12%)
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
G C+P KCDGF+DC DG+DE + C + +CA C+ + CD D
Sbjct: 2 GICLPPEKKCDGFLDC-RDGADEAGCTFAANVTSCHLDKFRCANGWACLETSRKCDHRSD 60
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C+ D +DE F C +GQ +C + C P+ W CD DC DN+DE
Sbjct: 61 CA-----DGSDEVDCNFPACHSGQFRCD-NGLCFPNRWRCDGFADCG-----DNSDE--- 106
Query: 331 KYFSHNAVLCHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
+ + C N+ C + +CV +K CDG DCS+ DE C+N C ++
Sbjct: 107 --ANCTLIGCPDNKFLCPQGSPTGGPKCVERTKLCDGHGDCSDLADEKVECSNHL-CTSI 163
Query: 386 KCSHKCSPTPRGAMCFCPAGQNPNKT---QCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
C+H+C P+P G +C C GQ + T C D DEC G CDQTCTN S+ CSC +
Sbjct: 164 GCAHQCRPSPEGGICICAEGQVLSTTDNRTCSDRDECKEWGFCDQTCTNVERSFECSCQD 223
Query: 443 GYTLRPDGKSCTAVNVPQ 460
GY L DG C A N Q
Sbjct: 224 GYEL-IDGNQCAASNASQ 240
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 111/346 (32%), Positives = 152/346 (43%), Gaps = 75/346 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA---ECTPGQFSCGMGKCIPE 220
C N RC ++N+C+ + +CDG DC NG DE P +C + C F+C G CIP
Sbjct: 2752 CPSNSFRCPNNNRCIPATWYCDGDDDCGNGADEPPDYCKSGTKTCFGDLFTCDNGNCIPR 2811
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFN------GQVQCALSKK-----CIPHNWLCDEEM 269
+ CDG DCL D SDE N HQC + + C+ +K+ CIP W+CD +
Sbjct: 2812 IYICDGDNDCL-DNSDEDNR--HQCGSRKCDSETEFSCSANKQWGKAQCIPRKWVCDGDP 2868
Query: 270 DCSTDDIVDNTDEDWDKFH-----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC VD DE+ + C Q C + +CI NW CD + DC D D
Sbjct: 2869 DC-----VDGADENSTLLNCTSRNSCSAEQFTCG-NGRCIHRNWTCDHDNDCG--DGSDE 2920
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
E KY + C P E C ++ +CVA S CD + DC + DE
Sbjct: 2921 GPECNGKYRT-----CSPTEFACQNA-KCVAKSYHCDKENDCGDWSDE------------ 2962
Query: 385 LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVD--------------ADECLIDG----- 423
C++ + + CP GQ N +QC+D +DE + G
Sbjct: 2963 WNCTYSGGKSGSTPVATCPDGQFKCANSSQCIDESLVCNKVSDCPDDSDESHLCGVNECL 3022
Query: 424 -----SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
C Q C + + Y C+C GY L DGK+CT V+ D P
Sbjct: 3023 KVEVHQCGQLCIDAPIKYKCACNPGYRLMADGKACTDVDECTDTPG 3068
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 114/234 (48%), Gaps = 26/234 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAEC--TPGQFSCGMGKCIP 219
+ C NE +C S+ +C+ + CDG DC +G DE P C++ T +F+C G+CI
Sbjct: 3496 IPCPENEFKCNSTGRCILGTWKCDGDNDCRDGSDEDPAICHSRPCDTDTEFACKNGRCIQ 3555
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDD 275
+SW CD DC DGSDEP Q C G +C + +CIP CD + DC D
Sbjct: 3556 KSWYCDSDNDC-GDGSDEPAHICRQRNCTAGWKRCPQWGNYRCIPQWLFCDGKDDCR--D 3612
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D E K H+ + QC +K+CIP W CD E DC+ D DED ++ H
Sbjct: 3613 GSDELPEQCPKCHE--TAEFQCK-NKRCIPRRWTCDFENDCA-----DGDDED-EELCRH 3663
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
C +E RC S +CV CD DC++G DE CE C++
Sbjct: 3664 QYRECSASEFRCASDGKCVPGRYRCDLDSDCTDGSDE-------MGCEGFTCTN 3710
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ + CDG DC + DE C C+ +F C G+CIP S++CD DC D S
Sbjct: 912 RCIPKTWVCDGDDDCLDNSDENQNCTKPTCSTDEFQCTSGRCIPNSFRCDSDNDC-GDSS 970
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE C Q C + +CIP W CD E DC D +DE D+ C Q
Sbjct: 971 DETGCVNVTCDASQFTCD-NGRCIPPTWKCDSENDCG-----DGSDEGDFCAERTCAYFQ 1024
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C S CIP +W+CD + DC DN DE+ + C +L+CG+ QCV
Sbjct: 1025 FTCPRSGHCIPQSWVCDGDNDC-----FDNKDEE-----GCPPITCSAQQLKCGNGKQCV 1074
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CDG PDC +G DE
Sbjct: 1075 HESYKCDGIPDCDDGSDE 1092
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/344 (29%), Positives = 145/344 (42%), Gaps = 49/344 (14%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
H C +E RC S +CV CD DC++G DE CT G F C G CI
Sbjct: 3663 HQYRECSASEFRCASDGKCVPGRYRCDLDSDCTDGSDEMGCEGFTCTNGTFQCKSGHCIS 3722
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE------EMDC-S 272
+ ++CDG DC D SDE + C + +G K C P + CD E C
Sbjct: 3723 KHFRCDGERDCHLDASDEAD-CPPRYPDG-------KYCPPERFECDNHVCVNVENRCNG 3774
Query: 273 TDDIVDNTDEDWDKFHQCFNG--QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+D DN+DE ++ G + QC +++CI +CD DC D +DE+
Sbjct: 3775 VNDCGDNSDEKPEECSDKCGGRDRFQCD-NRRCILRWQICDGHNDCE-----DGSDENNV 3828
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENLKC 387
+ C+PNE ++ CV C+ + DC + DE C++ + C N C
Sbjct: 3829 TLCAKRPKPCNPNEQFTCANRNCVPKELVCNLQNDCEDESDERG-CHSASSCTDSSNGGC 3887
Query: 388 SHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTE 442
H+C + T G +C C G N C D DEC + +C Q C N SY C C
Sbjct: 3888 EHRCQNLTGGGYICSCNRGYIASKENPKICEDVDECATLQHNCSQICINLKGSYKCGCHS 3947
Query: 443 GY-----------------TLRPDGKSCTAVNVPQDEPASIIFS 469
G+ L DG + ++N Q + +IF
Sbjct: 3948 GFDSVDNVSGVCKSPGPWNLLFSDGSNVISLNTTQRKEREVIFG 3991
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 144/341 (42%), Gaps = 83/341 (24%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ + G NR L+T I +P ++ + N +YW D L + +
Sbjct: 2459 VREKIERSNLDGTNREVLITATI-YPFAITVFGN--FIYWTDLQLRGLYRAEKHTGADMI 2515
Query: 152 ESVR-VDGSHN------------------------AVLCHPN-----ELRCGSSNQCVAL 181
E VR +D S A CHP+ E +C S + V
Sbjct: 2516 ELVRRLDDSPRDLQVFSPERQRCQFNPCTFNNGGCAQSCHPSTNGTSECKCDESTKLVND 2575
Query: 182 SKFCDG--------KPDCSNG--------------------EDEGPFCNAECTPGQFSCG 213
++ C G K C+NG ED+G C P ++ CG
Sbjct: 2576 NRMCVGRNLTCEGNKFYCANGKCISRLWACDGDDDCGDNSDEDKGYCSFHTCGPIEYRCG 2635
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
G+CI +SWKCD DC D +DE C G+ CA +++CI +C+ DC
Sbjct: 2636 NGRCIFKSWKCDHENDC-GDNTDEDGCTYASCAEGEFTCA-NQRCISMTQVCNGINDCKD 2693
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+ D + + C + +C + C+ WLCD + DC DN+DE+ D
Sbjct: 2694 ANTTDEASDRCSRNTTCPSNHFKCNSTNICVEPFWLCDGDNDCG-----DNSDEN-DSAC 2747
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+ + C N RC ++N+C+ + +CDG DC NG DE P
Sbjct: 2748 TQRS--CPSNSFRCPNNNRCIPATWYCDGDDDCGNGADEPP 2786
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 62/129 (48%), Gaps = 8/129 (6%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ N CH ++ RC + C+ S+ CD + DC++G DE C GQF C G C
Sbjct: 29 AANVTSCHLDKFRCANGWACLETSRKCDHRSDCADGSDEVDCNFPACHSGQFRCDNGLCF 88
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-----KCIPHNWLCDEEMDCST 273
P W+CDGF DC D SDE N + C + + C KC+ LCD DCS
Sbjct: 89 PNRWRCDGFADC-GDNSDEANCTLIGCPDNKFLCPQGSPTGGPKCVERTKLCDGHGDCS- 146
Query: 274 DDIVDNTDE 282
D+ D E
Sbjct: 147 -DLADEKVE 154
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 119/300 (39%), Gaps = 52/300 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVLC- 165
+ + + G NR +V ++ P I D ++W D +L + + G + VL
Sbjct: 3292 IAYSDLDGRNRRYVVQDTLKVPHVFAITVFDDFIFWTDWNLKAISRANKWTGENYTVLRN 3351
Query: 166 ---HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPGQFSCGMGKCIPE 220
P +L + A C G++ G C+ C +P + KC+
Sbjct: 3352 TTHRPYDLHVYHPLRQAAYPNPC--------GKNNGG-CSGLCLLSPAKNGTVGFKCV-- 3400
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDN 279
C DG + CI C GQ +C +CIP W CD E DC D
Sbjct: 3401 ---CPNQFILAPDGKN----CIANCTAGQHRCGGKDNRCIPLYWKCDGEKDCQ-----DG 3448
Query: 280 TDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
TDE + C +GQ QC + C LCD DC D D D D +
Sbjct: 3449 TDEPSSCLERFCKSGQFQCK-NHNCTTATTLCDGVDDCG--DGSDEKDCD---------I 3496
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA-------DCENLKCSHK 390
C NE +C S+ +C+ + CDG DC +G DE P C+++ C+N +C K
Sbjct: 3497 PCPENEFKCNSTGRCILGTWKCDGDNDCRDGSDEDPAICHSRPCDTDTEFACKNGRCIQK 3556
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 129/302 (42%), Gaps = 45/302 (14%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F + ++ +A M G + ++++++ PS L IDY+ D+LYW D+ +E +DG++
Sbjct: 2414 FGPNGKIFRATMAGTMKEAIISQDLTQPSGLAIDYDDDMLYWTDAVREKIERSNLDGTNR 2473
Query: 162 AVL----CHPNELRC-GSSNQCVALSKFCDGKPDCSNGE---------DEGPFCNAECTP 207
VL +P + G+ L + + G D+ P +P
Sbjct: 2474 EVLITATIYPFAITVFGNFIYWTDLQLRGLYRAEKHTGADMIELVRRLDDSPRDLQVFSP 2533
Query: 208 GQFSCGMGKCIPESWKC--------DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK--- 256
+ C C + C +G +C D S + C + C +K
Sbjct: 2534 ERQRCQFNPCTFNNGGCAQSCHPSTNGTSECKCDESTKLVNDNRMCVGRNLTCEGNKFYC 2593
Query: 257 ---KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
KCI W CD + DC + + D+ + FH C + +C + +CI +W CD E
Sbjct: 2594 ANGKCISRLWACDGDDDCGDN---SDEDKGYCSFHTCGPIEYRCG-NGRCIFKSWKCDHE 2649
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC--SNGED 371
DC DNTDED Y S C E C ++ +C+++++ C+G DC +N D
Sbjct: 2650 NDCG-----DNTDEDGCTYAS-----CAEGEFTC-ANQRCISMTQVCNGINDCKDANTTD 2698
Query: 372 EG 373
E
Sbjct: 2699 EA 2700
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + + GM G N + +VT + + WP++L IDY D LYW D+HL+ + +DG +
Sbjct: 3243 LQAYIGRLGMDGSNFTRIVTYEQRLAWPNALTIDYMTDKLYWADAHLDYIAYSDLDGRNR 3302
Query: 162 AVL 164
+
Sbjct: 3303 RYV 3305
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVS 78
I N E + S ++ V+ DW ++ N RN + +++
Sbjct: 635 IRRNGTGRENVLASQNEGVEGLALDWASKNLYYIDSRKGTLNVLNTRNSTYRRTLLRDLK 694
Query: 79 SVRLRCAQIND---LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI--QWPSSLV 133
R N + WD PA + +A + G + +V KNI WP+ L
Sbjct: 695 RPRAIVVHPNKGFIFYSEWDRPA--------NISRAYLDGTHL--MVFKNILLGWPNGLA 744
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ D LYWCD+ L+ ++ ++DG+
Sbjct: 745 IDFETDRLYWCDALLDHIQHSKLDGT 770
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 34/159 (21%)
Query: 46 KYFKRILNGTHTL----------ALEFNHRNQSLCFIQQQ-NVSSVRLRCAQINDLLNSW 94
K F++ L+GT + L + Q+L ++ + N V +L S
Sbjct: 1366 KIFRKELSGTPKVIISSGADLIEGLALDWIAQNLYWVDSRLNTIEVSRENGSNRMVLLSK 1425
Query: 95 DLPAPEIFPLDE----------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ 138
D+ P LD R+E+ M G NR+ ++T I WP+ L +D
Sbjct: 1426 DIDQPRGIALDPSPDARVLFWTDWGDHPRIERVNMDGSNRTSILTSKIFWPNGLTLDLPT 1485
Query: 139 DILYWCDSHLNTVESVRVDGSHNA-------VLCHPNEL 170
+Y+ DS ++ ++ DGS L HP+ L
Sbjct: 1486 KRVYFADSKVDYIDYCNYDGSGRRQVLSGSHYLLHPHSL 1524
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
R+E + M G R LV++ + P+++ ID++ D ++W D L+T+E ++ DG+ +
Sbjct: 4115 RIEMSWMDGTKRKVLVSERLAHPTAITIDFSMDNTIFWADHTLSTIEMMKRDGTGRTTVL 4174
Query: 166 HPNEL 170
+ +
Sbjct: 4175 RGDNI 4179
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ R+ +A M G LVT I S L +D ++WCDS L+ +E+V DG + ++
Sbjct: 396 NSRIFRANMDGSKMKDLVTDAIYKASGLAVDLPTKRIFWCDSLLDYIETVDYDGKNRFLV 455
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVR--------LRCAQINDLLNSWDL 96
DK+ + +N + L N R+ + ++++++ V L +++L +D+
Sbjct: 1303 DKHTCKAINSSSAFLLISNRRSLLVSDLKEKSIEVVPVEVENVVALASDTHSNVLYWYDM 1362
Query: 97 PAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
+IF R E +G +++ L +D+ LYW DS LNT+E R
Sbjct: 1363 KTKKIF----RKELSGTP----KVIISSGADLIEGLALDWIAQNLYWVDSRLNTIEVSRE 1414
Query: 157 DGSHNAVL 164
+GS+ VL
Sbjct: 1415 NGSNRMVL 1422
>gi|270015974|gb|EFA12422.1| hypothetical protein TcasGA2_TC004414 [Tribolium castaneum]
Length = 2145
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 154/309 (49%), Gaps = 34/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ + CDG DC + +DE C P QF C + +C+ ES+K
Sbjct: 1098 CAYYQFTCPRTGHCIPQNWVCDGDDDCFDKQDEQDCPPITCQPNQFKCADLRQCVQESYK 1157
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ QC N Q QC S CIP W CD DC
Sbjct: 1158 CDGIPDC-NDGSDELGCPSIAPDQCNNEKQFQCQSSNICIPKAWHCDGTHDC-------- 1208
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D+ D+ C GQ++CA + +C+ ++CD + DC D +DE +
Sbjct: 1209 -DDGSDEPESC--GQIKCAPNFYMCNNGQCVFKAYICDGKDDCG-----DGSDESYIHAC 1260
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHK 390
C + C G S +CV L+ CDGKP C NG DEGP C+ K +C++ CS+
Sbjct: 1261 KKPPFRCPDGQWNCPGVSERCVNLTNVCDGKPHCPNGADEGPDCDFK-ECQHQGGLCSNG 1319
Query: 391 CSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP G +C CP+G+ + C D +EC G C QTCTNT SY CSC GY L P
Sbjct: 1320 CKQTPNGPLCLCPSGETLKDDGFACEDLNECEPPGICSQTCTNTKGSYFCSCVPGYLLEP 1379
Query: 449 DGKSCTAVN 457
+ SC A N
Sbjct: 1380 NKHSCKAYN 1388
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/308 (36%), Positives = 148/308 (48%), Gaps = 33/308 (10%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---C 217
C P +L C + C+ CD DC +G DE +C F CG C
Sbjct: 50 CEPGQLTCRQYIWNKTYCIPPHYRCDMTVDCIDGSDETECTYRKCQADDFHCGSRASDPC 109
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
IP+ KCDG++DC G DE C Q +CA ++CI H+ CD + DC
Sbjct: 110 IPKEKKCDGYLDC-RSGKDEQGCSGIACRLDQFRCANGQRCIEHSQKCDHKNDCG----- 163
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DN+DE F C Q +CA + CIP + CD DCS D +DE + A
Sbjct: 164 DNSDEQGCNFPLCQGVQFRCA-NALCIPGAFHCDGYQDCS-----DGSDE-----VNCTA 212
Query: 338 VLCHPNELRC-----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
+ C N+ C S +C+ +K CDGK DC +G DE C+ K C +L C +KC
Sbjct: 213 IACPDNKFLCPKGGNNRSPKCIPKNKLCDGKRDCEDGADEETACS-KLSCPSLGCEYKCQ 271
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C+CP G+ P+ CVD DECL G CDQ CTN+ Y CSC GY L+ D
Sbjct: 272 ASLTGGSCYCPDGRKLAPDNRTCVDRDECLEWGFCDQICTNSDGGYKCSCAPGYALK-DK 330
Query: 451 KSCTAVNV 458
C A+N
Sbjct: 331 NKCNALNA 338
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + QC S +CIP + CD E
Sbjct: 984 FTCNNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGANEFQCK-SGRCIPMTFKCDAEN 1042
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD--------- 320
DC D +DE C + Q C + +CIP++W CD E DC
Sbjct: 1043 DCG-----DFSDETGCVNVTCGSTQFHCD-NGRCIPNSWKCDSENDCGDGSDEGESCAEK 1096
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C PN+ +C QCV S
Sbjct: 1097 TCAYYQFTCPRTGHCIPQNWVCDGDDDCFDKQDEQDCPPITCQPNQFKCADLRQCVQESY 1156
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 1157 KCDGIPDCNDGSDE 1170
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ + C ++ RC + +C+ S+ CD K DC + DE C QF C CIP
Sbjct: 132 SGIACRLDQFRCANGQRCIEHSQKCDHKNDCGDNSDEQGCNFPLCQGVQFRCANALCIPG 191
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA-----LSKKCIPHNWLCDEEMDC 271
++ CDG+ DC DGSDE N C + + C S KCIP N LCD + DC
Sbjct: 192 AFHCDGYQDC-SDGSDEVNCTAIACPDNKFLCPKGGNNRSPKCIPKNKLCDGKRDC 246
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 82/372 (22%), Positives = 141/372 (37%), Gaps = 54/372 (14%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVS 78
+ N E + S ++ V+ DW ++ + RN + +N+
Sbjct: 715 VHRNGTSREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTYRRTLLKNLK 774
Query: 79 SVRLRCAQIND---LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
R N + WD PA + +A G N + + WP+ L ID
Sbjct: 775 RPRAIVVHPNKGYLFFSEWDRPA--------NISRAASDGTNLTVFKNLTLGWPNGLSID 826
Query: 136 YNQDILYWCDSHLNTVESVRVDGS-----HNAVLCHPNELRCGSSNQCVALSKF-CDGKP 189
+ QD LYWCD+ L+ V+ +DG+ ++ ++ HP + + + + K
Sbjct: 827 FQQDRLYWCDALLDHVQHSNLDGTDVKTVNSRLIRHPFSIVIHKNFMYITDWRLDAIIKL 886
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
GEDE T + G+ + + D C + C CF
Sbjct: 887 HKLTGEDEETLIREPQTNRLY--GVKIYSEQEQRIDSNHPCWTNNGG----CSKLCFAVP 940
Query: 250 VQ---------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
++ C ++ +P C + D S + V WD C N
Sbjct: 941 IESGSLVAKCGCPYGERLMPDQKTC--QADPSHEPPVQACPNSWD--FTCNN-------- 988
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
++CIP +W+CD + DC +DN+DE+ + C NE +C S +C+ ++ C
Sbjct: 989 QRCIPKSWVCDGDDDC-----LDNSDEEQN----CTKPTCGANEFQC-KSGRCIPMTFKC 1038
Query: 361 DGKPDCSNGEDE 372
D + DC + DE
Sbjct: 1039 DAENDCGDFSDE 1050
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFH 288
C D S EP + C N +++CIP +W+CD + DC +DN+DE+ +
Sbjct: 965 CQADPSHEPP--VQACPNSWDFTCNNQRCIPKSWVCDGDDDC-----LDNSDEEQNCTKP 1017
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C + QC S +CIP + CD E DC D D T V C + C
Sbjct: 1018 TCGANEFQCK-SGRCIPMTFKCDAENDCG--DFSDET--------GCVNVTCGSTQFHC- 1065
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
+ +C+ S CD + DC +G DEG C K C++ PR C
Sbjct: 1066 DNGRCIPNSWKCDSENDCGDGSDEGESCAEKT------CAYYQFTCPRTGHCI 1112
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G RS ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1531 RIERIGMDGTKRSTIINTKIYWPNGLTLDTATQRVYFADSKLDFIDFCYYNGTGRQQVLA 1590
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1591 GSHYLLHPHSL 1601
>gi|328709384|ref|XP_001944217.2| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Acyrthosiphon pisum]
Length = 4640
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 159/376 (42%), Gaps = 90/376 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E +CGS +CV + CDG+ DC + DE N C+ QF C G+C+P +WKC
Sbjct: 1073 CAPGEWQCGSG-RCVPGTFRCDGENDCGDYSDETGCTNVTCSSTQFLCENGRCVPATWKC 1131
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC DGSDE + C + C Q C S CIP W+CD + DC DN DE+
Sbjct: 1132 DSENDC-GDGSDEGDFCAEKTCAYFQFTCPRSGHCIPQTWVCDGDNDC-----FDNQDEE 1185
Query: 284 W--------------------------DKFHQCFNG------------------QVQCAL 299
D C +G Q +C
Sbjct: 1186 GCPPITCSATQFKCADLRQCIQETYKCDGILDCNDGSDELGCPTLAPNQCDTEKQFRCEK 1245
Query: 300 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 324
S CIP W CD DC DD D
Sbjct: 1246 SGICIPKTWYCDGTADCDDDSDEPKTCGQVSCQSNYFKCNNSQCIFKAYICDGRDDCGDG 1305
Query: 325 TDEDWDKYFSHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADC 382
+DED+ C E +C ++N+CV ++ CDG P C NG DEGP C+ + D
Sbjct: 1306 SDEDYRLACGAPPFKCMSGEWQCPNATNRCVNITNVCDGIPHCPNGADEGPNCDLPECDK 1365
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQNPNKT-QCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
E CS+ C TP G +C CP G+ N T +C+D +EC G C Q C NT SY CSC
Sbjct: 1366 EGSYCSNGCKQTPVGPLCTCPHGEVLNTTYECMDLNECDPPGLCSQHCVNTKGSYFCSCA 1425
Query: 442 EGYTLRPDGKSCTAVN 457
GY L D +C A+N
Sbjct: 1426 PGYVLESDKHTCKALN 1441
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/333 (33%), Positives = 155/333 (46%), Gaps = 43/333 (12%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMG 215
C P L C + C CD DC +G DE +C F C G G
Sbjct: 92 CEPTLLPCRQYHWNKTYCYPPHYRCDVTVDCVDGSDEADCTYRKCQTEDFRCEVNGPGTG 151
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN--TCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
C+P+ +CDG+ DC + DE N T ++ C + +C +KCI CD + +C
Sbjct: 152 PCLPKPKRCDGYFDC-RNHKDEENCGTAMNMSCPLDKFRCLNGQKCIDPKLKCDHQNNCG 210
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE+ F C GQ +C + CIP N+ CD DC D TDE
Sbjct: 211 -----DNSDEENCNFAACHVGQFRCG-NGLCIPLNYQCDGYADCH-----DGTDE----- 254
Query: 333 FSHNAVLCHPNELRC--GSSNQ---CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ A+ C P + C G N+ C+ S+ CDG DC + DE C+ + C L C
Sbjct: 255 LNCTALAC-PGKYLCPQGGPNKRPKCINKSQLCDGHKDCEDNADEEAACSTLS-CPALGC 312
Query: 388 SHKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+KC +P G C+C G+ N +KT C+D DEC G C+Q C N+ SY CSC GY
Sbjct: 313 EYKCQASPTGGSCYCAEGRKIANDSKT-CIDRDECSEWGFCEQMCKNSEGSYTCSCYPGY 371
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L D K C A N Q P + F+ +I ++
Sbjct: 372 VLM-DRKKCVANNRTQ--PFQVYFAQDKNIMKM 401
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/344 (31%), Positives = 160/344 (46%), Gaps = 44/344 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPG-QFSCGMGK---- 216
C + C + N C+ CDG DC + DE N +C +F+C K
Sbjct: 2923 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDIRHQCNNRKCDESTEFTCQANKAWNR 2981
Query: 217 --CIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSKKCIPHNWLCDEEM 269
CIP+ W CDG DC+ DG+DE T ++ C Q C + +CI W+CD +
Sbjct: 2982 AQCIPKKWLCDGDPDCV-DGADENATLLNCTTVANCSADQFTCG-NGRCINRGWVCDHDN 3039
Query: 270 DCSTDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC D TDE D ++ C + C + KCI + + CD E DC DN+D
Sbjct: 3040 DCG-----DGTDEGKDCHAQYKTCSPREFSCQ-NFKCIRNTYRCDGEDDCG-----DNSD 3088
Query: 327 EDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADC 382
E N A C + RC +S QC+ + C+ DC++ DE CN A
Sbjct: 3089 EYGCPAGGRNGTAAACGTDHFRC-TSGQCINATLVCNKVSDCADDSDEPAHCNVDECARV 3147
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCS 439
E +C+H+C TP G C C G + C D +EC+ + G+C Q C NT S+ C
Sbjct: 3148 ELNQCAHRCVDTPTGFTCECNEGYKLMEDGKACDDINECVEVPGACSQYCLNTPGSFYCK 3207
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C E Y R D ++C + +++P +IF++ +R + L+ S
Sbjct: 3208 CDETYYDRTSDERTCKRRD--RNKPW-LIFTNKYYVRNMSLDAS 3248
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 96/198 (48%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ + CDG DC + DE C C PG++ CG G+C+P +++CDG DC D S
Sbjct: 1044 RCIPKAWVCDGDDDCLDNSDEEQNCTKPTCAPGEWQCGSGRCVPGTFRCDGENDC-GDYS 1102
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE C + Q C + +C+P W CD E DC D +DE D+ C Q
Sbjct: 1103 DETGCTNVTCSSTQFLCE-NGRCVPATWKCDSENDCG-----DGSDEGDFCAEKTCAYFQ 1156
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C S CIP W+CD + DC DN DE+ + C + +C QC+
Sbjct: 1157 FTCPRSGHCIPQTWVCDGDNDC-----FDNQDEE-----GCPPITCSATQFKCADLRQCI 1206
Query: 355 ALSKFCDGKPDCSNGEDE 372
+ CDG DC++G DE
Sbjct: 1207 QETYKCDGILDCNDGSDE 1224
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 157/364 (43%), Gaps = 71/364 (19%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGP-FCNA---ECTPGQFSCGMGKCIPESWKCDGFVDC 230
+N+C+ CD + DC + DE C +C+ +F C GKCIP W+CD DC
Sbjct: 3768 NNRCIPKRWLCDFENDCGDNSDESEDLCKGLYRQCSESEFQCSNGKCIPGQWRCDHDDDC 3827
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWD 285
D SDE N QC NG QC S CI + CD + DC D +DE +
Sbjct: 3828 -GDNSDELNCGGFQCKNGTFQCK-SGHCIASYFRCDGDRDCR-----DFSDEIGCPPRYP 3880
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEE----------------MDCSTD---------- 319
+ C + +C +K C+ ++ +CD E M C+ D
Sbjct: 3881 EGRYCPKSKFECKTTKLCVFNSEICDGEDDCGDGSDEASELCSNMSCTLDNRFSCDNKHC 3940
Query: 320 -------DIVDNTDEDWDK------YFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPD 365
D VDN + D+ HN C H E C ++ +CV SK C+ + D
Sbjct: 3941 IPMYQRCDGVDNCGDGSDENDLSVCGMMHNIRQCDHYTEFTC-ANRECVNKSKLCNLQYD 3999
Query: 366 CSNGEDEGPFCNNKADC-ENLK--CSHKC--SPTPRGAMCFCPAGQ--NPNKTQCVDADE 418
C + DE C+ C E+ K C H C + +G C C AG N +C D DE
Sbjct: 4000 CGDLSDE-KGCHYSGTCLESTKGGCEHYCLNVTSGKGFSCACYAGYEIGENSKKCEDLDE 4058
Query: 419 CLID-GSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRR 476
C + C Q CTN + S++CSC EG+ L C AV D +I++++ ++R
Sbjct: 4059 CQLGLHHCSQDCTNINGSFICSCREGFVLSDLFSGVCKAV----DPMLTIVYTNGPELRG 4114
Query: 477 IHLN 480
N
Sbjct: 4115 YESN 4118
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 146/363 (40%), Gaps = 82/363 (22%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPE 220
+ C N L+C +N CV CDG DC + DE C F C +CIP
Sbjct: 2836 ITCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDSVHCSQRTCPTNSFRCPNHRCIPA 2895
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+W CDG DC + + P C + CF C + CIP ++CD + DC +
Sbjct: 2896 TWYCDGDDDCGDGSDEPPEYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----L 2949
Query: 278 DNTDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTD 326
DN+DED HQC N + C +K +CIP WLCD + DC VD D
Sbjct: 2950 DNSDEDIR--HQCNNRKCDESTEFTCQANKAWNRAQCIPKKWLCDGDPDC-----VDGAD 3002
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--------N 378
E+ C ++ CG+ +C+ CD DC +G DEG C+
Sbjct: 3003 ENATLLNCTTVANCSADQFTCGNG-RCINRGWVCDHDNDCGDGTDEGKDCHAQYKTCSPR 3061
Query: 379 KADCENLKC---SHKCSPT------------PRG------AMC-----FCPAGQNPNKT- 411
+ C+N KC +++C P G A C C +GQ N T
Sbjct: 3062 EFSCQNFKCIRNTYRCDGEDDCGDNSDEYGCPAGGRNGTAAACGTDHFRCTSGQCINATL 3121
Query: 412 ------QCVD---------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C D DEC + C C +T + C C EGY L DGK+C
Sbjct: 3122 VCNKVSDCADDSDEPAHCNVDECARVELNQCAHRCVDTPTGFTCECNEGYKLMEDGKACD 3181
Query: 455 AVN 457
+N
Sbjct: 3182 DIN 3184
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 105/217 (48%), Gaps = 24/217 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTP-GQFSCGMGKCIPES 221
C E +C S+ +C+ S CDG+PDC +G DE P N +C P +FSC G+CIP+
Sbjct: 3632 CPSIEFKCRSNGRCILDSWKCDGEPDCKDGSDEDPAMCHNRQCDPKSEFSCKNGRCIPKL 3691
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC--ALSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3692 WVCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGKTNYRCIPKWLFCDGKDDCR----- 3745
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSH 335
D +DE + +C + +CIP WLCD E DC DN+DE D K
Sbjct: 3746 DGSDELPENCPKCQAATDYQCKNNRCIPKRWLCDFENDCG-----DNSDESEDLCKGLYR 3800
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E +C S+ +C+ CD DC + DE
Sbjct: 3801 Q---CSESEFQC-SNGKCIPGQWRCDHDDDCGDNSDE 3833
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 139/321 (43%), Gaps = 55/321 (17%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ + G NR L+T I +P +L + N +YW D L N +
Sbjct: 2587 VREKIERSTLDGGNREVLITATI-YPFALTVHGN--YIYWTDLQLRGVYRAEKHTGANMI 2643
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCV----ALSKFCDGKP---------DCSNGEDE 197
E + R+D S + + + + S N C ++ C P D S +E
Sbjct: 2644 EIIKRLDDSPRDIAIYSKDRQKCSVNPCSISNGGCTQSCHPGPNSTAECKCDDNSKLVNE 2703
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++ C H C + +CA
Sbjct: 2704 GRMCVNKNITCESNKFHCRNGKCISRMWSCDGDDDCGDNSDEDVKYCAYHSCSTNEFRCA 2763
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE + C +G+ CA + +CI + +C+
Sbjct: 2764 -NGRCIFKTWKCDHENDCK-----DGSDEVGCVYPPCADGEFTCA-NFRCIAMSQVCNGV 2816
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T + K + C N L+C +N CV CDG DC + DE
Sbjct: 2817 NDCKDNATSDETHDRCPK-----NITCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDE- 2870
Query: 374 PFCNNKADCENLKCSHKCSPT 394
+++ CS + PT
Sbjct: 2871 ---------DSVHCSQRTCPT 2882
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 150/399 (37%), Gaps = 87/399 (21%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHG 115
H E N N+ Q+ ++ + SW L A + K GM G
Sbjct: 3324 HLEVAELNGTNRRTLKAGIQDPRALAVHPGTGYLYFTSWHLQA--------YIGKIGMDG 3375
Query: 116 ENRSPLVT--KNIQWPSSLVIDYNQ----------------------------------- 138
N + ++T +I WP++L IDY
Sbjct: 3376 SNFTQILTHENDIAWPNALTIDYFTERIYWADAHLDYIASADLEGRHKHIVLSGERVPHV 3435
Query: 139 -------DILYWCDSHLNT-VESVRVDGSHNAVLC----HPNELRCGSSNQCVALSKFC- 185
D L+W D +L V+S + G + +L P +L + + + S C
Sbjct: 3436 FALTLFDDELFWTDWNLKAIVKSNKFTGQNYRILRNTTHRPYDLHVYHNLRQIPFSNPCG 3495
Query: 186 DGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
D CS+ P + +P + + P S+ C D D TCI C
Sbjct: 3496 DDNGGCSHLCLLRPVPGVDPSPDGY---LDAKSPVSFTCACPNQFYLDPRDN-KTCISNC 3551
Query: 246 FNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCALSKK 302
GQ +C + +KCIP W CD E DC+ D TDE + C G QCA ++
Sbjct: 3552 TVGQHECKENDQKCIPWFWKCDGERDCA-----DGTDEIQSQCPTRSCRGGAFQCA-NRN 3605
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C P +CD DD D +DE + + C E +C S+ +C+ S CDG
Sbjct: 3606 CTPSATICD-----GVDDCGDGSDE------KNCELPCPSIEFKCRSNGRCILDSWKCDG 3654
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
+PDC +G DE P A C N +C K + + C
Sbjct: 3655 EPDCKDGSDEDP-----AMCHNRQCDPKSEFSCKNGRCI 3688
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQ 75
I N E + S ++ V+ DW + Y+ GT + N N+ + +
Sbjct: 764 IHRNGTGREIVLASQNEGVEGLAVDWVAKNLYYIDSRKGTLNVLSTRNVTNKRVLLKNMK 823
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
++ + + + WD PA + +A G N + WP+ L +D
Sbjct: 824 RPRAIVVHPNKGYIFFSEWDRPA--------NISRAYTDGSNLIVFRNITLGWPNGLAVD 875
Query: 136 YNQDILYWCDSHLNTVESVRVDGS-----HNAVLCHP 167
+ D LYWCD+ L+ V+ +DG+ ++ ++ HP
Sbjct: 876 FATDRLYWCDALLDHVQHSNLDGTDVRTINSTLIRHP 912
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G + LVT + +P+ L +D D LYW D+ LN +ES++ D + V+
Sbjct: 4255 KIEMSWMDGSRQKSLVTTRLHYPTGLTVDTAMDHSLYWVDTKLNVIESIKYDQKNRVVVI 4314
Query: 166 HPNEL 170
L
Sbjct: 4315 RGEHL 4319
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1584 RIERVGMDGSNRSVIISSKIYWPNGLTLDIVNQRVYFADSKLDFIDFCYYNGTGRQQVIA 1643
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1644 GSHYLLHPHSL 1654
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
DK+ + LN + + N + + +++Q + V + + + + ++ IF
Sbjct: 1433 DKHTCKALNHSAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1490
Query: 105 DERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K ++ P ++T + L D+ +YW DS LNTVE +G++
Sbjct: 1491 DMKLKKISRLDKSSEPKDIITSGLDLVEGLAYDWIGGHIYWLDSRLNTVEVANENGTNRI 1550
Query: 163 VLCHPN 168
+L N
Sbjct: 1551 ILLKEN 1556
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ KA + G N P+VT I P L +D +YW D+ L+ ++ V G V+
Sbjct: 2228 KIGKAYLDGSNWMPIVTTGISQPRDLTVDMVTHDVYWVDARLDLIQKVSASGGERQVV 2285
>gi|195132161|ref|XP_002010512.1| GI15973 [Drosophila mojavensis]
gi|193908962|gb|EDW07829.1| GI15973 [Drosophila mojavensis]
Length = 4555
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/309 (38%), Positives = 156/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1065 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 1124
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC Q +C S CIP W CD DC DN
Sbjct: 1125 CDGIPDC-NDGSDELGCPSMGPNQCNVEKQFRCKSSGACIPIAWHCDGTYDCP-----DN 1178
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1179 SDEE-----DC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGTEHAC 1226
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G + +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 1227 VPPPFKCPHGQWQCPGVTERCVNITSVCDDTPDCPNGADEGEGCD-LAECEHQSGQCSTL 1285
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G P+ CVD +EC G C Q CTNT SY CSCT+GY L P
Sbjct: 1286 CQKTPNGALCVCPPGSEIGPDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTQGYVLGP 1345
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1346 NKHTCKAVN 1354
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 142/292 (48%), Gaps = 31/292 (10%)
Query: 200 FCNAEC--TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
FCNA P + S G C+P+ +C+G++DC G DE C Q +CA +K
Sbjct: 50 FCNAPVGSAPAEGSRLTGPCVPKEKRCNGYLDC-RTGRDEEGCSGVPCRLDQFRCANGQK 108
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CI C+ DC DN+DE F C + Q +C + CIP+N+ CD DC+
Sbjct: 109 CIDAALKCNHRNDCD-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYNDCA 162
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRC-----GSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + A+ C N+ C + +C+ S+ CDGK DC +G DE
Sbjct: 163 -----DESDE-----ANCTAIACPDNKFLCPRGGLNGAPKCILKSQLCDGKRDCEDGSDE 212
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCT 430
C+ + C L C KC P+ G +C+C GQ+ P+ C+D DEC G CDQ CT
Sbjct: 213 ETACSIDS-CPALSCEFKCGPSLTGGVCYCRQGQSLAPDNRTCIDLDECAEWGHCDQLCT 271
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
NT SY C C +GY L K C A P +IF+ I R++ + S
Sbjct: 272 NTPGSYTCQCAQGYMLINSSK-CIA---PDANNLQLIFAHDRAIMRMNAHDS 319
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2824 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2879
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI W C
Sbjct: 2880 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWTC 2936
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + + CD E DC
Sbjct: 2937 DHDNDCG-----DGTDEGKFCNSKYKSCSALEFTCQ-NFKCIRNQYRCDGEDDCG----- 2985
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE K V C + C ++ QC+ S C+ PDC++ DE CN A
Sbjct: 2986 DHSDEVGCK---KENVTCAQGQFAC-TNGQCIDYSLVCNKVPDCTDESDEPAHCNVDECA 3041
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYV 437
E +C HKC T G C C G + C D DECL + G+C Q C+NT S+
Sbjct: 3042 KVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLELPGACSQHCSNTPGSFY 3101
Query: 438 CSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + + P +IF++ +R + ++G
Sbjct: 3102 CKCDENYYERQNDEHTCKRKD---NIPPWLIFTNKYYVRNMSVDG 3143
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 144/356 (40%), Gaps = 77/356 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2739 CPHNHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPSNSFRCPNHRCIPATW 2798
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2799 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2852
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2853 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2905
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2906 TTLHNCATQQPCGEDMFTCGNG-RCINKGWTCDHDNDCGDGTDEGKFCNSKYKSCSALEF 2964
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC ++C + C GQ QC+D
Sbjct: 2965 TCQNFKCIRNQYRCDGEDDCGDHSDEVGCKKENVTCAQGQFACTNGQCIDYSLVCNKVPD 3024
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC + C C +T Y C C EGY L DGK+C V+
Sbjct: 3025 CTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVD 3080
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 154/373 (41%), Gaps = 83/373 (22%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3663 DFKCGN-NRCIPKQWMCDFADDCGDASDENDAICKGRYRECSESEFRCGNGKCISSRWQC 3721
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 3722 DHEDDC-GDNSDEMSCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEIDCPPRF 3779
Query: 272 --------------------------STDDIVDNTDEDWDKFHQCFN----GQVQCALSK 301
TDD D +DED K FN + QCA +
Sbjct: 3780 PGGRFCPESRFQCTNNLCVSLTDLCDGTDDCGDGSDED-PKVCSDFNCDTLRRFQCA-NH 3837
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CV 354
+C+ +CD D+ D +DE+ N LC + C Q C+
Sbjct: 3838 RCVARYQICD-----GIDNCGDGSDEN-------NMTLCASKQKPCDLYTQYQCANKHCI 3885
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QN 407
++ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 3886 ERAQVCDYSDDCGDASDE-LGCHHTSSCSEQNRGGCQHHCHNLTDDGYICTCYPGYIIAP 3944
Query: 408 PNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
NK +C D DEC +C C N + +Y CSC EG+ L S + V + E +
Sbjct: 3945 DNKKKCADVDECATRQHTCSHQCHNMNGTYSCSCREGFHL---SDSASGVCKAEKEDVVL 4001
Query: 467 IFSSTVDIRRIHL 479
+F++ +IR + L
Sbjct: 4002 VFANGPEIRGLDL 4014
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E+A + G NR LV I +P ++ + +D +YW D L V N V
Sbjct: 2488 VREKIERADLDGRNRELLVAATI-YPFAITV--FRDYIYWTDLQLRGVYRAEKHTGANMV 2544
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R S+ N C + C +GK +C S +E
Sbjct: 2545 EMVKRLEDSPRDIRIFSADRQKCNVNPCNINNGGCAQSCHPAPNGKAECKCDDNSKVVNE 2604
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC + ++PN C H C + +C
Sbjct: 2605 GRMCAPRNNTCEASKFYCKNGKCISRMWSCDGDDDCGDSSDEDPNYCAYHSCSPNEFRCN 2664
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 2665 -NGRCIFKSWKCDHENDCK-----DGSDEIGCTYPPCVDGEFTCA-NGRCIPQAQVCNGV 2717
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2718 NDCKDNATSDETHERCPM-----NTTCPHNHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2772
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2773 PLHCGQRTCPSNSFRCPNHRCIPA 2796
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 95/207 (45%), Gaps = 20/207 (9%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
GS +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3461 GSDEKCIPWFWKCDGEKDCKDGSDEPSTCGPRHCRAGTFQCKNTNCTPSATICDGIDDC- 3519
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-- 289
DGSDE N C C +C S +CI +W CD + DC D +DED H+
Sbjct: 3520 GDGSDEQN-CDLPCPLSDFKCKTSGRCILDSWRCDGDADCK-----DGSDEDPLVCHKRT 3573
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
C + +CIP W+CD + DC D++DE N C RC G
Sbjct: 3574 CDPETEYSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 3625
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEGP 374
SN +C+ FCDGK DC + DE P
Sbjct: 3626 QSNYRCIPKWLFCDGKDDCRDNSDELP 3652
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 86/181 (47%), Gaps = 18/181 (9%)
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC 252
N ++E C +F C G+CIP +++CD DC D SDE + C Q C
Sbjct: 974 NSDEEQNCTKPTCGSNEFQCKSGRCIPLNFRCDQENDC-GDNSDELDCGNVTCATSQFAC 1032
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
A + +CIP W CD E DC D++DE D+ C Q C + CIP +W+CD
Sbjct: 1033 A-NGRCIPSMWKCDSENDCG-----DSSDEGDFCAEKTCAYFQFTCPRTGHCIPQSWVCD 1086
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DC D DE + C N+ +C QCV S CDG PDC++G D
Sbjct: 1087 GDDDC-----FDKQDEK-----DCPPISCLANQFKCADLRQCVEESYKCDGIPDCNDGSD 1136
Query: 372 E 372
E
Sbjct: 1137 E 1137
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 157 DGSHNAVLCHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
DGS C P R G+ + C + CDG DC +G DE C+ C F C
Sbjct: 3481 DGSDEPSTCGPRHCRAGTFQCKNTNCTPSATICDGIDDCGDGSDEQN-CDLPCPLSDFKC 3539
Query: 213 GM-GKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEM 269
G+CI +SW+CDG DC +DGSDE P C + + + + + + +CIP W+CD +
Sbjct: 3540 KTSGRCILDSWRCDGDADC-KDGSDEDPLVCHKRTCDPETEYSCKNGRCIPQLWMCDFDN 3598
Query: 270 DCSTDDIVDNTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D++DE Q C G +C + +CIP CD + DC DN+
Sbjct: 3599 DCG-----DDSDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR-----DNS 3648
Query: 326 DEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE N C + +CG +N+C+ CD DC + DE
Sbjct: 3649 DE-----LPENCPKCSSETDFKCG-NNRCIPKQWMCDFADDCGDASDE 3690
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 113/272 (41%), Gaps = 75/272 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 2656 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDEIGCTYPPCVDGEFTCANGRCIPQAQVC 2714
Query: 225 DGFVDCLEDG-SDEPN-------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+G DC ++ SDE + TC H ++C + C+ WLCD + DC
Sbjct: 2715 NGVNDCKDNATSDETHERCPMNTTCPHN----HLKCEKTNICVEPYWLCDGDNDCG---- 2766
Query: 277 VDNTDED-------------------------W--------------------DKFHQCF 291
DN+DED W + CF
Sbjct: 2767 -DNSDEDPLHCGQRTCPSNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCF 2825
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2826 GDLFTCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENK 2878
Query: 352 -----QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2879 SWQRAQCIPKKWICDGDPDCVDGADENTTLHN 2910
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LNT+ES+R DGS +
Sbjct: 4151 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNTIESMRADGSRRKSIV 4210
Query: 166 HPNELR 171
++LR
Sbjct: 4211 KGDQLR 4216
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C +GQ C S +KCIP W CD E DC D +DE C G QC
Sbjct: 3447 TCIANCTSGQHLCGGSDEKCIPWFWKCDGEKDCK-----DGSDEPSTCGPRHCRAGTFQC 3501
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C +S +C+ S
Sbjct: 3502 K-NTNCTPSATICD-----GIDDCGDGSDE------QNCDLPCPLSDFKCKTSGRCILDS 3549
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P +K C+
Sbjct: 3550 WRCDGDADCKDGSDEDPLVCHKRTCD 3575
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 11/128 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ V C ++ RC + +C+ + C+ + DC + DE C QF C CIP
Sbjct: 92 SGVPCRLDQFRCANGQKCIDAALKCNHRNDCDDNSDEQGCNFPPCHHAQFRCTNALCIPY 151
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDD 275
++ CDG+ DC D SDE N C + + C + KCI + LCD + DC
Sbjct: 152 NFHCDGYNDC-ADESDEANCTAIACPDNKFLCPRGGLNGAPKCILKSQLCDGKRDCE--- 207
Query: 276 IVDNTDED 283
D +DE+
Sbjct: 208 --DGSDEE 213
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3266 LQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYTDLEGRHR 3325
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
++ L S ALS F D
Sbjct: 3326 HIV-----LSGSSVPHVFALSLFDD 3345
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G + PLVT I P L ID +YW DS L+T++ + +G + V+
Sbjct: 2132 RIGKALLDGSDWIPLVTSGISQPRDLTIDMQTHDVYWVDSKLDTIQKISYNGVNAKVI 2189
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 675 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 734
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 735 RPRAIVVHPNRGYI--FFSEWDRPA--------NITRANTDGSGLLVFRNVTLGWPNGLS 784
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 785 IDFKEDRVYWCDALLDHVQHANLDGT 810
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 4/122 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N T + N + + +++Q + V + + + + ++ IF
Sbjct: 1346 NKHTCKAVNHTAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1403
Query: 105 DERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K HG ++T + L D+ LYW DS LNT+E +GS+
Sbjct: 1404 DMKLKKISRLDHGMEPQEIITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRL 1463
Query: 163 VL 164
VL
Sbjct: 1464 VL 1465
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ ++ + M G + +V K + PS L IDY+ LYW D+ +E +DG +
Sbjct: 2443 YSTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDRKLYWTDAVREKIERADLDGRNR 2502
Query: 162 AVL 164
+L
Sbjct: 2503 ELL 2505
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G +
Sbjct: 1497 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1556
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1557 SSHYLLHPHSL 1567
>gi|317419385|emb|CBN81422.1| Low-density lipoprotein receptor-related protein 2 [Dicentrarchus
labrax]
Length = 4562
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/363 (32%), Positives = 169/363 (46%), Gaps = 67/363 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C E +C +S +C++L CDG DC +G DE C + C+P QF+C G+CIP ++
Sbjct: 64 CTSQEFKCVTSGECISLGFVCDGDEDCIDGSDEQRTCGGQTCSPDQFTCQEGQCIPGKYR 123
Query: 224 CDGFVDCLE------------------------------------DGSDEPNTCIHQCFN 247
CD DC++ DGSDE N C
Sbjct: 124 CDHVKDCVDNSDENNCNYPRCTEKTCANGACYNNSQDCNGLQDCRDGSDEFNCTTQHCPI 183
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
Q QCA + CIP ++CD DC DN+DE + C + C S +CIP +
Sbjct: 184 HQYQCA-NGYCIPRPFVCDHFDDCG-----DNSDEQGCVYQSCSGNEFTCT-SGRCIPQS 236
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD+ DC D +DE + N+ C+P E C + C++++K CDGKPDC
Sbjct: 237 WVCDQFNDCG-----DYSDE---RGCDSNSRGCYPGEWGCPGLSLCISVAKVCDGKPDCP 288
Query: 368 NGEDEGPFCNNKAD-------CENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADE 418
G DE N+ A+ C L C C +P+G C+CP G + CVD D+
Sbjct: 289 GGTDE---TNSTAEQTCSLEQCSALSCEFHCHLSPQGGACYCPDGFIVANDSRSCVDYDD 345
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C + G CDQ C + ++ CSC +GY L G C A NV P +IF+ D+
Sbjct: 346 CQMWGICDQMCEDRPGTHHCSCADGYFLE-QGHVCKA-NVSAGLP-QLIFTGGGDVMMAD 402
Query: 479 LNG 481
++G
Sbjct: 403 IHG 405
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 124/330 (37%), Positives = 160/330 (48%), Gaps = 33/330 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P+ C ++C+ S CDG DC +G DE C C +F+C G +C+ ++
Sbjct: 1144 CPPSYFLC-PDHRCIYSSYVCDGDQDCLDGSDEKD-CEFSCASYEFACASGDQCVSLRYQ 1201
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C N + QC CIP W CD DC D +
Sbjct: 1202 CDGVFDC-RDHSDERDCPTRGPGLCHNDEFQCQTDGFCIPDEWECDGHPDCE-----DGS 1255
Query: 281 DEDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C + QCA +K CIP +WLCD E DC D +DE +
Sbjct: 1256 DEHNSCLPVTCSSYYFQCA-NKLCIPKSWLCDGENDCR-----DMSDE---QNCPTPPFS 1306
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRG 397
C + C + C+ L K C+G+ DC NG DE P CN + DC N CSH C P G
Sbjct: 1307 CPSGQWLCPTDQLCIDLDKVCNGQRDCPNGADESPICN-QDDCALNNGGCSHGCVQGPFG 1365
Query: 398 AMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
+ C CP+G N +KT C D +ECLI G C Q C N S+ C C+EGY L PDG++C
Sbjct: 1366 SQCTCPSGFQLLNDSKT-CEDINECLIPGFCSQQCYNERGSFRCYCSEGYLLEPDGRTCK 1424
Query: 455 AVN----VPQDEPASIIFSSTVDIRRIHLN 480
A N V S I S +++R +N
Sbjct: 1425 ATNPLAAVLLVAKRSQIISQKINMRPPLMN 1454
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 150/331 (45%), Gaps = 38/331 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +S QC+ + CD DC + DE C PG F C G CIP + +C
Sbjct: 3760 CSESEFRCDNS-QCIPGNWVCDHDNDCGDNSDERDCELLTCRPGSFQCDSGHCIPAALQC 3818
Query: 225 DGFVDCLEDGSDEPNTCIHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC +D SDE + C Q QC ++ C+ ++CD DD D
Sbjct: 3819 DGRADC-QDLSDETSCPTRYPGGRWCPQHQFQCG-NRLCVSQGFVCD-----GVDDCGDR 3871
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE + C N + +CA + CI LC+++ DC D++DE +
Sbjct: 3872 SDE---QLSLCLNITCEMPSRFRCA-NGYCIYSGLLCNQKDDCG-----DSSDEKEELCR 3922
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCS 392
C E +C ++ CVAL CD +C + DE G + +CE C H+C+
Sbjct: 3923 EPTLPPCTLEEFKC-TNGHCVALPYVCDHNDNCGDRTDELGCNFGHDRNCEEKLCQHECT 3981
Query: 393 -PTPRGAMCFCPAGQ--NPNKT-QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
G +C C G +P+ T C+D +EC + G+C Q C NT SY C C GY
Sbjct: 3982 NLNGTGFICSCRPGYRVDPDSTYTCLDINECEVYGTCPQVCKNTKGSYDCECASGYRKVG 4041
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+G C A + ++ + IRR +L
Sbjct: 4042 NGNMCEA----EGPTPLLLLPENIRIRRFNL 4068
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 151/366 (41%), Gaps = 60/366 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C PN+ RC +C+ S CD DCS+G DE C + C+P QF+C G CIP+S
Sbjct: 2865 CSPNQFRC-DEGKCIPDSWVCDSIQDCSDGTDEPLSCEDQIKTCSPSQFTCTNGNCIPQS 2923
Query: 222 WKCDGFVDCLEDGSDEP------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--- 272
CDG DC ++ + P TC F +CI + +CD E DC+
Sbjct: 2924 MVCDGNNDCWDNSDEAPELQCGERTCSSNQFTCPTWHPGHPRCISISLVCDGEKDCANAA 2983
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C + Q C +
Sbjct: 2984 DELQNCPNRTCHMNEFACSNGLCIFLPFHCDRVNDCGDGSDELGCTYDTCSSNQFTCG-N 3042
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CI ++ CD E DC +D +DE D C P + C S +C+ +K C
Sbjct: 3043 GACIYASFTCDGESDC-----MDGSDEA-DSLCITPQPTCAPQQYMC-KSGECIDANKVC 3095
Query: 361 DGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDAD 417
+G+ DC + DE G N + +C+ C+ T G C C G P+ C D +
Sbjct: 3096 NGQKDCQDNSDEKGCGINECRNPSVHRCAQICTDTLTGYYCSCHPGYRLMPDGKACEDLN 3155
Query: 418 ECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
EC+ C Q C N SY C C GY DG++C + +++S+ IR
Sbjct: 3156 ECVSTPAVCSQICENAAGSYHCKCAPGYIREADGRTCRQNS---GIAPYLLYSNRYYIRN 3212
Query: 477 IHLNGS 482
+ +GS
Sbjct: 3213 LTTDGS 3218
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 152/362 (41%), Gaps = 84/362 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +++C +N C+ CDG +C + DE P FC C+P QF C GKCIP+SW
Sbjct: 2823 CPAGQVKCERNNICIYPENLCDGYNNCGDNSDENPLFCAGRTCSPNQFRCDEGKCIPDSW 2882
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DG+DEP +C I C Q C + CIP + +CD DC DN
Sbjct: 2883 VCDSIQDC-SDGTDEPLSCEDQIKTCSPSQFTCT-NGNCIPQSMVCDGNNDC-----WDN 2935
Query: 280 TDEDWD---KFHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCS--------------- 317
+DE + C + Q C +CI + +CD E DC+
Sbjct: 2936 SDEAPELQCGERTCSSNQFTCPTWHPGHPRCISISLVCDGEKDCANAADELQNCPNRTCH 2995
Query: 318 --------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+D D +DE Y + C N+ CG+ C+ S
Sbjct: 2996 MNEFACSNGLCIFLPFHCDRVNDCGDGSDELGCTYDT-----CSSNQFTCGNG-ACIYAS 3049
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT-----Q 412
CDG+ DC +G DE ++L + + + P+ MC + NK
Sbjct: 3050 FTCDGESDCMDGSDEA---------DSLCITPQPTCAPQQYMCKSGECIDANKVCNGQKD 3100
Query: 413 CVD-ADE--CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
C D +DE C I+ C Q CT+T Y CSC GY L PDGK+C +N
Sbjct: 3101 CQDNSDEKGCGINECRNPSVHRCAQICTDTLTGYYCSCHPGYRLMPDGKACEDLNECVST 3160
Query: 463 PA 464
PA
Sbjct: 3161 PA 3162
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 116/242 (47%), Gaps = 32/242 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C + RCG + +CV + CDG+ DC +G DE C C GQF C G C +
Sbjct: 3513 CSSTQFRCGDNEKCVPIWWKCDGQSDCGDGSDEPQTCPPRYCPIGQFQCQDGNCTYPGFI 3572
Query: 224 CDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC ++ ++ C H+C + Q QC +KKCIP +W CD DCS D +DE
Sbjct: 3573 CDGHSDCPDNSDEDAALCSDHRCQDNQFQCK-NKKCIPVSWHCDGVNDCS-----DGSDE 3626
Query: 283 DWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D + Q C GQ QCA + C+P +++CD + DC D +DE ++ +
Sbjct: 3627 DAETCSQRTCRPGQFQCA-NGHCLPSSYVCDAQDDCG-----DGSDEPYETCMGPDYKCD 3680
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHKC 391
E C ++ +C+ CDG DC + DE CE++ C +H+C
Sbjct: 3681 EDTEFSCKTNYRCIPQWARCDGTNDCIDNSDE-------QGCEDVTCDPLGDFRCDNHRC 3733
Query: 392 SP 393
P
Sbjct: 3734 VP 3735
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/339 (30%), Positives = 140/339 (41%), Gaps = 92/339 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ + GM G N + ++T ++WP++L IDY
Sbjct: 3347 IGRVGMDGSNVTAIITTKLEWPNALTIDYTTNKIFFADSHLNFLDFADMDGQNRHRAIAG 3406
Query: 138 -----------QDILYWCDSHLNTVESV-RVDGSHNAVL------------CHPNELRCG 173
+D +YW D + +TVE + G V+ HP +
Sbjct: 3407 TLPHVFAVSLFEDWVYWTDWNTHTVEKAHKYTGEQRTVMGNNTHRPYDIHVYHPYR-QPR 3465
Query: 174 SSNQC----VALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCGMG-K 216
S N C + S C P E P C A+C+ QF CG K
Sbjct: 3466 SDNPCSSHHLTCSHLCLIAPGGQRATCECPDHFIGLSVGFKIQCVADCSSTQFRCGDNEK 3525
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C+P WKCDG DC DGSDEP TC C GQ QC C ++CD DC
Sbjct: 3526 CVPIWWKCDGQSDC-GDGSDEPQTCPPRYCPIGQFQCQ-DGNCTYPGFICDGHSDCP--- 3580
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DED H+C + Q QC +KKCIP +W CD DCS D +DED +
Sbjct: 3581 --DNSDEDAALCSDHRCQDNQFQCK-NKKCIPVSWHCDGVNDCS-----DGSDEDAE--- 3629
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C P + +C ++ C+ S CD + DC +G DE
Sbjct: 3630 TCSQRTCRPGQFQC-ANGHCLPSSYVCDAQDDCGDGSDE 3667
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 135/308 (43%), Gaps = 50/308 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+++E+A + GENR ++ + +Q+P ++ + + QDI +W D + + + DGS AVL
Sbjct: 2574 DKIERASLTGENRQ-VIVQGVQYPFAMTV-FQQDI-FWTDWTERGVFRARKDDGSDFAVL 2630
Query: 165 CH-----PNELRCGSSNQCVALSKFCDG--------------KPDC-----------SNG 194
PN++ + ++ + S C P+C +NG
Sbjct: 2631 TQDMQYRPNDIHVYAESKQESCSSSCQQFNGGCSHVCVPGPLGPECQCPHQGKWYLANNG 2690
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
+D C P QF+C G CI WKCDG+ DC ++ + C H C C
Sbjct: 2691 KDCIQDTGKRCQPEQFTCLNGNCISARWKCDGYNDCHDNSDELERVCAFHTCSAMDFTCD 2750
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +C+P ++ CD TDD DN+DE F C + +CI ++CD
Sbjct: 2751 -NGRCVPLSYACD-----YTDDCGDNSDERGCPFPTCNPATEFTCANGRCISAAFVCDGH 2804
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC DNT D + + C +++C +N C+ CDG +C + DE
Sbjct: 2805 NDCR-----DNTTSD---EINCSDRTCPAGQVKCERNNICIYPENLCDGYNNCGDNSDEN 2856
Query: 374 P-FCNNKA 380
P FC +
Sbjct: 2857 PLFCAGRT 2864
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 139/375 (37%), Gaps = 101/375 (26%)
Query: 165 CHPNELRCGS----------------------------SNQCVALSKFCDGKPDCSNGED 196
C PN RC + C+ S CDG DC +G D
Sbjct: 1032 CRPNSYRCDGIVDCVDKTDEANCTDSGATCSSYAFTCNNKHCIMSSWRCDGMDDCGDGSD 1091
Query: 197 E---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQ 251
E C F+C KCI + W CDG DC DGSDE N+ I C
Sbjct: 1092 EMNCPTRLPTTCAANYFTCDNNKCISKQWLCDGDNDC-GDGSDEHNCNSTITTCPPSYFL 1150
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C +CI +++CD + DC +D +DE +F C + + CA +C+ + CD
Sbjct: 1151 CP-DHRCIYSSYVCDGDQDC-----LDGSDEKDCEF-SCASYEFACASGDQCVSLRYQCD 1203
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
DC D++DE + LCH +E +C + C+ CDG PDC +G D
Sbjct: 1204 GVFDCR-----DHSDE--RDCPTRGPGLCHNDEFQCQTDGFCIPDEWECDGHPDCEDGSD 1256
Query: 372 E------------------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
E C+ + DC ++ C PTP + CP+GQ
Sbjct: 1257 EHNSCLPVTCSSYYFQCANKLCIPKSWLCDGENDCRDMSDEQNC-PTPPFS---CPSGQW 1312
Query: 408 --PNKTQCVDADE-----------------------CLIDGSCDQTCTNTHLSYVCSCTE 442
P C+D D+ L +G C C C+C
Sbjct: 1313 LCPTDQLCIDLDKVCNGQRDCPNGADESPICNQDDCALNNGGCSHGCVQGPFGSQCTCPS 1372
Query: 443 GYTLRPDGKSCTAVN 457
G+ L D K+C +N
Sbjct: 1373 GFQLLNDSKTCEDIN 1387
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 110/231 (47%), Gaps = 34/231 (14%)
Query: 157 DGSHNAVLCHP-----NELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC-NAECTPGQ 209
DGS C P + +C N C CDG DC + DE C + C Q
Sbjct: 3541 DGSDEPQTCPPRYCPIGQFQCQDGN-CTYPGFICDGHSDCPDNSDEDAALCSDHRCQDNQ 3599
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
F C KCIP SW CDG DC DGSDE TC + C GQ QCA + C+P +++CD
Sbjct: 3600 FQCKNKKCIPVSWHCDGVNDC-SDGSDEDAETCSQRTCRPGQFQCA-NGHCLPSSYVCDA 3657
Query: 268 EMDCSTDDIVDNTDEDWDK----FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE ++ ++C + + C + +CIP CD T+D +
Sbjct: 3658 QDDCG-----DGSDEPYETCMGPDYKCDEDTEFSCKTNYRCIPQWARCD-----GTNDCI 3707
Query: 323 DNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE V C P + RC +++CV + CDG DC +G DE
Sbjct: 3708 DNSDEQ-----GCEDVTCDPLGDFRC-DNHRCVPIRWQCDGTDDCGDGSDE 3752
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 93/214 (43%), Gaps = 22/214 (10%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
C +F C G+C+ +W+CDG DC +D SDE N C + + +C S +CI
Sbjct: 23 GSCDSTEFQCSSGQCVDIAWRCDGTKDCTDD-SDELNCPPPSCTSQEFKCVTSGECISLG 81
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++CD + DC +D +DE Q C Q C +CIP + CD DC
Sbjct: 82 FVCDGDEDC-----IDGSDEQRTCGGQTCSPDQFTCQ-EGQCIPGKYRCDHVKDC----- 130
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
VDN+DE+ Y C ++ C S+ C+G DC +G DE
Sbjct: 131 VDNSDENNCNYPRCTEKTC--------ANGACYNNSQDCNGLQDCRDGSDEFNCTTQHCP 182
Query: 382 CENLKCSHK-CSPTPRGAMCFCPAGQNPNKTQCV 414
+C++ C P P F G N ++ CV
Sbjct: 183 IHQYQCANGYCIPRPFVCDHFDDCGDNSDEQGCV 216
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKC 258
C F C G+C P S++CDG VDC+ D +DE N TC F +K C
Sbjct: 1020 CGDYAFECDEGRCRPNSYRCDGIVDCV-DKTDEANCTDSGATCSSYAFTCN-----NKHC 1073
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
I +W CD DC D D + C C + KCI WLCD + DC
Sbjct: 1074 IMSSWRCDGMDDCG--DGSDEMNCPTRLPTTCAANYFTCD-NNKCISKQWLCDGDNDCG- 1129
Query: 319 DDIVDNTDEDWDKYFSHN----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE HN C P+ C ++C+ S CDG DC +G DE
Sbjct: 1130 ----DGSDE-------HNCNSTITTCPPSYFLC-PDHRCIYSSYVCDGDQDCLDGSDE 1175
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 124/317 (39%), Gaps = 76/317 (23%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA ++E+A + G R+ ++ + P+ L +DY + +LYW D+ L+ +E
Sbjct: 2527 WGFPA--------KIERATLGGNFRTAIINTGLTTPNGLSLDYEERMLYWADASLDKIER 2578
Query: 154 VRVDGSHNAVLC----HPNEL--------------------RCGSSNQCVALSKFCDGKP 189
+ G + V+ +P + R + L++ +P
Sbjct: 2579 ASLTGENRQVIVQGVQYPFAMTVFQQDIFWTDWTERGVFRARKDDGSDFAVLTQDMQYRP 2638
Query: 190 DCSN--GEDEGPFCNAECTPGQFSCGMGK-CIP-------------ESWKCDGFVDCLED 233
+ + E + C++ C QF+ G C+P + + + DC++D
Sbjct: 2639 NDIHVYAESKQESCSSSCQ--QFNGGCSHVCVPGPLGPECQCPHQGKWYLANNGKDCIQD 2696
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCF 291
C NG CI W CD DC DN+DE FH C
Sbjct: 2697 TGKRCQPEQFTCLNG--------NCISARWKCDGYNDCH-----DNSDELERVCAFHTCS 2743
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
C + +C+P ++ CD TDD DN+DE + + C+P ++
Sbjct: 2744 AMDFTCD-NGRCVPLSYACD-----YTDDCGDNSDERGCPFPT-----CNPATEFTCANG 2792
Query: 352 QCVALSKFCDGKPDCSN 368
+C++ + CDG DC +
Sbjct: 2793 RCISAAFVCDGHNDCRD 2809
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 149/428 (34%), Gaps = 67/428 (15%)
Query: 37 VDNTDEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
+D DW T+ +A +++ +N + + + + W
Sbjct: 782 IDAMAYDWTSKVLFWTTSTYRSVVAFRVTDKSRRDIVTGLRNPKGIAVHPSAGYLFWSDW 841
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA + K G N PLV + WP L +DY + LYW DS L+ + +
Sbjct: 842 YRPA--------VIMKGFTDGSNAVPLVNTTLGWPYGLAVDYMMNRLYWVDSQLDQIGHI 893
Query: 155 RVDG------SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG 208
++G S + P L S VA ++ + + G + G
Sbjct: 894 GIEGFDRQTFSSIGQITQPYSLTIYSDYLYVADTR-TRAVFEMRKRDGGGNIMIRQGITG 952
Query: 209 QFSCGMGKCIPESW---KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC-IPHNW- 263
+ S +C+ + L C H CF + S+ C P+
Sbjct: 953 IMNLKTYTADLHSTFTSRCNLVANGL---------CSHFCFPTP---SFSRVCGCPYGMK 1000
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
L + DC DD V D D +C G +C P+++ CD +DC VD
Sbjct: 1001 LQANQRDCIKDDSVPPPDNCGDYAFECDEG--------RCRPNSYRCDGIVDC-----VD 1047
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
TDE + + C C ++ C+ S CDG DC +G DE
Sbjct: 1048 KTDE---ANCTDSGATCSSYAFTC-NNKHCIMSSWRCDGMDDCGDGSDE----------- 1092
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
+ C + T C + +K D D DGS + C +T + +C
Sbjct: 1093 -MNCPTRLPTTCAANYFTCDNNKCISKQWLCDGDNDCGDGSDEHNCNST----ITTCPPS 1147
Query: 444 YTLRPDGK 451
Y L PD +
Sbjct: 1148 YFLCPDHR 1155
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+LE+A M G NR LV + P+ + +D +YW DSH +TVE+V G ++
Sbjct: 531 KLERAFMDGSNRLELVKSRLGTPTGITLDIVTQRVYWSDSHFDTVETVTYSGLDRKIV 588
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + G NR+ L + I P L +DY + LYW D L+ + + ++G+ +L
Sbjct: 2215 KIERSLLDGTNRTVLASDGIASPHGLTVDYTNNFLYWTDDVLDIISRMAINGTQRLIL 2272
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSS 131
+ +NV+S R + D N +L + + R+E+A M G R +V+ + WP+
Sbjct: 1540 LLTKNVTSPR---GLVLDPRNYTNLMFWSDWGQNPRIERADMDGNMRRVIVSTKLYWPNG 1596
Query: 132 LVIDYNQDILYWCDSHLNTVESVRVDG-------SHNAVLCHPNEL 170
L +DY +Y+ D++L ++ DG + + VL HP+ +
Sbjct: 1597 LALDYTTRRVYFADAYLKYIDYCDYDGKNRYQVMASDMVLQHPHGM 1642
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + + G+ R LV+ + WP+ L ID+ N D +YW DS + +ESV G +
Sbjct: 4208 KIECSWLDGQERKVLVSDGLGWPTGLSIDFANGDRIYWSDSKESRIESVLPSGDNRRTAV 4267
Query: 166 H 166
+
Sbjct: 4268 Y 4268
>gi|291391690|ref|XP_002712217.1| PREDICTED: low density lipoprotein-related protein 2 [Oryctolagus
cuniculus]
Length = 4649
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 174/347 (50%), Gaps = 32/347 (9%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CDS L+ + H C +++ C S+ QCV CD DCS+G DE
Sbjct: 85 CDSDLDCQDGSDEQQQHCRKTCSSHQMTC-SNGQCVPREYRCDRVRDCSDGTDERDCQYP 143
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
C Q +C G C S KCDG VDC D SDE N C C + + QC + CIP ++
Sbjct: 144 TCE--QLTCANGACYNTSQKCDGKVDC-RDSSDEAN-CTGLCLHNEFQCD-NGDCIPRSF 198
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+CD + DC+ DN+DE + C Q C+ + +CI NW+CD E DC D
Sbjct: 199 VCDHDFDCN-----DNSDEHSCTYPTCSGNQFTCS-NGQCIHQNWVCDGEQDCG-----D 247
Query: 324 NTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-- 380
+ DE+ D SH C+P E C S QC+ ++K CDG DC GEDE + ++
Sbjct: 248 HGDENGCDN--SHRYHKCYPREWACPQSGQCIPINKVCDGILDCPGGEDENSTADGRSCS 305
Query: 381 --DCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHL 434
C L C ++C TP G CFCP QN ++T C+D D+C I G CDQ C
Sbjct: 306 MTQCPTLNCEYQCHQTPSGGSCFCPPASIINQNDSRT-CIDFDDCQIWGICDQKCEYQFG 364
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ C C EGY L + + C A N DE ASIIFS+ D+ ++G
Sbjct: 365 HHRCLCEEGYILERE-QHCKA-NDSFDE-ASIIFSNGRDVLMGDIHG 408
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 113/307 (36%), Positives = 143/307 (46%), Gaps = 29/307 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CI 218
H+ C P++ C ++C+ + CDG DC +G DE C CT QF C G CI
Sbjct: 1141 HSTGTCQPSQFHC-PDHRCLDPAYVCDGDRDCVDGSDEAG-CVFNCTNSQFKCADGNGCI 1198
Query: 219 PESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+CDG C D SDE P C + + QC CIP W CD DC
Sbjct: 1199 SNINRCDGVFHC-SDNSDEAGCPTRPPGMCHSDEFQCQADGYCIPDVWECDGHSDC---- 1253
Query: 276 IVDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
VD +DE + C Q C + CIP +WLCD + DC D+ D D +
Sbjct: 1254 -VDGSDEHHGCIPKTCAPSQFHCD-NGNCIPKHWLCDGDNDCR--DLSDEKDCPTQPFH- 1308
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCS 392
C + +C + CV LS CD DC NG DE P CN +A C + C+H+C
Sbjct: 1309 -----CPSWQWQCPGYSICVNLSALCDNVFDCPNGTDESPLCN-QASCSDFNGGCTHQCI 1362
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P GA C CP G N +KT C D DEC G C Q C N S+ CSC Y L D
Sbjct: 1363 QGPFGASCLCPLGYQLANDSKT-CEDIDECDNPGFCSQHCFNMRGSFRCSCDNEYMLEGD 1421
Query: 450 GKSCTAV 456
G++C A+
Sbjct: 1422 GRTCKAI 1428
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/413 (28%), Positives = 154/413 (37%), Gaps = 118/413 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C P +C S+N C+ CDG DC + DE P FC C +F C G+CIP+ W
Sbjct: 2819 CSPGFTKCQSTNICIPRLYLCDGDNDCGDLSDENPTFCTTHTCRNTEFQCTSGRCIPQHW 2878
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD VDC DGSDEP +C C + + +C S +CIP +W+CD DC D
Sbjct: 2879 HCDQEVDC-PDGSDEPASCAQPPRTCSSQEFRCD-SGRCIPKDWICDGANDCG-----DM 2931
Query: 280 TDEDWDKFH----QCFNGQVQCALSKKCIPHNWL-------------------------- 309
+DED + H C Q C CIP W+
Sbjct: 2932 SDED-QRHHCGTKNCSGSQFMCVNPTGCIPQVWVCDGDADCADAADENQNCTRRSCSENE 2990
Query: 310 --------------CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
CD DC D +DE Y + CH E C + +C+
Sbjct: 2991 FTCRNGLCVRPSFRCDRRNDCG-----DYSDERDCSYPT-----CHDFEFTC-QNGRCIH 3039
Query: 356 LSKFCDGKPDCSNGEDEG---------------------------PFCNNKADCEN---- 384
CDG+ DC + DE CN+ DC +
Sbjct: 3040 NMFLCDGQNDCGDQSDEFEHMCHTPEATCPPHQFKCDNGHCIEMVKVCNHLDDCTDNSDE 3099
Query: 385 -------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQT 428
C H C+ T C C G +K CVD DEC + C Q
Sbjct: 3100 KGCGINECHDSSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECKEMPYVCSQK 3159
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C N SY+C C GY PDGK+C D +IFS+ +R + +G
Sbjct: 3160 CENEIGSYICKCAPGYIREPDGKTCRQ---NSDIEPYLIFSNRYYLRNLTTDG 3209
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 116/259 (44%), Gaps = 44/259 (16%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC G F CG G CIP SW+CDG DCL+D +DE C G QC CIPH+W
Sbjct: 25 ECHSGHFRCGNGHCIPLSWRCDGTRDCLDD-TDEAGCPHPSCHPGFFQCQSDGACIPHSW 83
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+CD ++DC D +DE + C + Q+ C+ + +C+P + CD DCS
Sbjct: 84 VCDSDLDCQ-----DGSDEQQQHCRKTCSSHQMTCS-NGQCVPREYRCDRVRDCS----- 132
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNN 378
D TDE +Y + + C ++ C S+ CDGK DC + DE G +N
Sbjct: 133 DGTDERDCQYPTCEQLTC--------ANGACYNTSQKCDGKVDCRDSSDEANCTGLCLHN 184
Query: 379 KADCENLKC------------------SHKCS-PTPRGAMCFCPAGQNPNKTQCVDADEC 419
+ C+N C H C+ PT G C GQ ++ D ++
Sbjct: 185 EFQCDNGDCIPRSFVCDHDFDCNDNSDEHSCTYPTCSGNQFTCSNGQCIHQNWVCDGEQD 244
Query: 420 LIDGSCDQTCTNTHLSYVC 438
D + C N+H + C
Sbjct: 245 CGDHGDENGCDNSHRYHKC 263
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3504 MCSSTQFLCANNEKCIPIWWKCDGQRDCSDGSDESALCPQRYCRLGQFQCKDGNCTSSRT 3563
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE + H+C + + QCA +K+CIP W CD DC DN+
Sbjct: 3564 LCNARQDC-PDGSDEEHALCDNHRCESNEWQCA-NKRCIPEAWQCDTVNDCG-----DNS 3616
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ C GQ +C + +CIP +W CD + DC D++DE + +
Sbjct: 3617 DEESSHCASRTCRPGQFKCD-NGRCIPQSWKCDVDNDCG-----DHSDEPIPECLTSAHN 3670
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3671 CDNHTEFSCKTNYRCIPRWAVCNGVDDCRDNSDE 3704
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC ++ QC+ CD DC + DE C P F C G C+P KC
Sbjct: 3752 CTESEFRC-ANQQCIPSLWICDQDNDCGDNSDERDCDMRTCHPDYFQCTSGHCVPNHIKC 3810
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN-----WLCDEEMDCSTDDIVDN 279
DG DCL D SDE +C + NG A +C H W CD + DC D
Sbjct: 3811 DGRADCL-DASDEA-SCPTRFPNGTYCPATMFECKNHVCIQSLWKCDGDNDCG-----DG 3863
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD------EEMDC-STDDIVDNTDEDWDKY 332
+DE+ H C V C PH + CD C DD D TDE +
Sbjct: 3864 SDEE---LHLCLG--VPCDP-----PHRFRCDNSRCIYSHRQCNGVDDCGDGTDEKEEHC 3913
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHK 390
C +E +C SS C++ CD DC + DE N+ ENL C
Sbjct: 3914 RPPTPRPCTQDEFKC-SSGHCISQHYVCDNVDDCGDHSDEAGCNLGKNRTCAENL-CEQN 3971
Query: 391 CSPTPRGA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-- 444
C+ G +C C G ++ C D +EC G C Q C NT SY C C +G+
Sbjct: 3972 CTELSGGGFICSCRPGYKAGTLDRNSCQDINECEQFGVCPQNCQNTKGSYECFCADGFRS 4031
Query: 445 -TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
++R G+ C A P ++ V IR+ +L+
Sbjct: 4032 MSVRY-GERCAA----DGNPPLLLLPENVRIRKYNLS 4063
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 114/257 (44%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ + CD DC N ++E C + C PGQF C G+CIP+SW
Sbjct: 3587 CESNEWQC-ANKRCIPEAWQCDTVNDCGDNSDEESSHCASRTCRPGQFKCDNGRCIPQSW 3645
Query: 223 KCDGFVDCLEDGSDEPN----TCIHQCFN------------------------------- 247
KCD DC D SDEP T H C N
Sbjct: 3646 KCDVDNDC-GDHSDEPIPECLTSAHNCDNHTEFSCKTNYRCIPRWAVCNGVDDCRDNSDE 3704
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G+ +C + CIP W CDE DC DN+DE+ +C + +
Sbjct: 3705 QGCEDRTCNPSGEFRCK-NHHCIPLRWKCDEHNDCG-----DNSDEENCVPRECTESEFR 3758
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
CA +++CIP W+CD++ DC DN+DE + CHP+ +C +S CV
Sbjct: 3759 CA-NQQCIPSLWICDQDNDCG-----DNSDER-----DCDMRTCHPDYFQC-TSGHCVPN 3806
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG+ DC + DE
Sbjct: 3807 HIKCDGRADCLDASDEA 3823
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 141/364 (38%), Gaps = 81/364 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N+S +++ ++WP+++ IDY D LYW D+HL +E ++G H +
Sbjct: 3339 IARVGMDGTNKSVIISTKLEWPNAITIDYTNDHLYWADAHLGYIEYSDLEGRHRHTVYDG 3398
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
L HP + + SN+ + ++ P
Sbjct: 3399 TLPHPFAITVFEDTVYWTDWNTRTVEKGNKYDGSNRMMLVNTTHRPFDIHVYHPYRQPIM 3458
Query: 202 NAECTPGQFSCG---MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
N C C + K + + C+ D + C+ C + Q CA ++KC
Sbjct: 3459 NNPCGINNGGCSHLCLIKAGGKGFTCECPDDFQTLHTGGTTRCLPMCSSTQFLCANNEKC 3518
Query: 259 IPHNWLCDEEMDCS-----------------------------------TDDIVDNTDED 283
IP W CD + DCS D D +DE+
Sbjct: 3519 IPIWWKCDGQRDCSDGSDESALCPQRYCRLGQFQCKDGNCTSSRTLCNARQDCPDGSDEE 3578
Query: 284 WD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
H+C + + QCA +K+CIP W CD DC DN+DE+ S C
Sbjct: 3579 HALCDNHRCESNEWQCA-NKRCIPEAWQCDTVNDCG-----DNSDEESSHCASRT---CR 3629
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNNKA-DCEN---LKCSHKCSPTPR 396
P + +C + +C+ S CD DC + DE P C A +C+N C PR
Sbjct: 3630 PGQFKC-DNGRCIPQSWKCDVDNDCGDHSDEPIPECLTSAHNCDNHTEFSCKTNYRCIPR 3688
Query: 397 GAMC 400
A+C
Sbjct: 3689 WAVC 3692
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 138/387 (35%), Gaps = 111/387 (28%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P +CGS + +CV CDG DC + DE N C+P F+C G+CI
Sbjct: 1018 PPTQQCGSFSFSCDNGRCVPSYYRCDGFNDCHDNSDEHLCGTSNNTCSPSAFTCDHGECI 1077
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTD- 274
P W+CD DC+ DGSDE N H C C + CIP NW+CD + DC
Sbjct: 1078 PAHWRCDKHNDCV-DGSDERNCPSHTPASCPAWAYTCD-NNACIPRNWVCDTDNDCGDGS 1135
Query: 275 ----------------------------------DIVDNTDEDWDKFHQCFNGQVQCALS 300
D VD +DE F+ C N Q +CA
Sbjct: 1136 DEKNCHSTGTCQPSQFHCPDHRCLDPAYVCDGDRDCVDGSDEAGCVFN-CTNSQFKCADG 1194
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CI + CD CS DN+DE + +CH +E +C + C+ C
Sbjct: 1195 NGCISNINRCDGVFHCS-----DNSDEAGCP--TRPPGMCHSDEFQCQADGYCIPDVWEC 1247
Query: 361 DGKPDCSNGEDE---------GP---------------FCNNKADCENLKCSHKCSPTP- 395
DG DC +G DE P C+ DC +L C P
Sbjct: 1248 DGHSDCVDGSDEHHGCIPKTCAPSQFHCDNGNCIPKHWLCDGDNDCRDLSDEKDCPTQPF 1307
Query: 396 -----------------RGAMC----FCPAGQNP----NKTQCVDADECLIDGSCDQTCT 430
A+C CP G + N+ C D +G C C
Sbjct: 1308 HCPSWQWQCPGYSICVNLSALCDNVFDCPNGTDESPLCNQASCSD-----FNGGCTHQCI 1362
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C GY L D K+C ++
Sbjct: 1363 QGPFGASCLCPLGYQLANDSKTCEDID 1389
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 145/381 (38%), Gaps = 104/381 (27%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFCNAE-CTPGQFSC-GMGKCIPESWKCDGFVDC 230
S+ +C+ S CDG+ +C NG + C C+PG C CIP + CDG DC
Sbjct: 2786 SNGRCIPQSFVCDGRNNCYDNGTSDERNCPPRTCSPGFTKCQSTNICIPRLYLCDGDNDC 2845
Query: 231 LEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---K 286
+ + P C H C N + QC S +CIP +W CD+E+DC D +DE
Sbjct: 2846 GDLSDENPTFCTTHTCRNTEFQCT-SGRCIPQHWHCDQEVDCP-----DGSDEPASCAQP 2899
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-----------WDKYFSH 335
C + + +C S +CIP +W+CD DC D +DED ++
Sbjct: 2900 PRTCSSQEFRCD-SGRCIPKDWICDGANDCG-----DMSDEDQRHHCGTKNCSGSQFMCV 2953
Query: 336 NAVLCHP----------------------------NELRCGSSNQCVALSKFCDGKPDCS 367
N C P NE C + CV S CD + DC
Sbjct: 2954 NPTGCIPQVWVCDGDADCADAADENQNCTRRSCSENEFTC-RNGLCVRPSFRCDRRNDCG 3012
Query: 368 NGEDEG----PFCNN-KADCENLKCSHKC-----------SPTPRGAMCFCPAGQNP--- 408
+ DE P C++ + C+N +C H MC P P
Sbjct: 3013 DYSDERDCSYPTCHDFEFTCQNGRCIHNMFLCDGQNDCGDQSDEFEHMCHTPEATCPPHQ 3072
Query: 409 ---NKTQCV----------------DADECLID-------GSCDQTCTNTHLSYVCSCTE 442
+ C+ D C I+ CD CT+T S+ CSC
Sbjct: 3073 FKCDNGHCIEMVKVCNHLDDCTDNSDEKGCGINECHDSSISGCDHNCTDTLTSFYCSCRP 3132
Query: 443 GYTLRPDGKSCTAVNVPQDEP 463
GY L D ++C ++ ++ P
Sbjct: 3133 GYKLMSDKRTCVDIDECKEMP 3153
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 100/241 (41%), Gaps = 59/241 (24%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPG------------------- 208
+C++ CD DC + DE P C G
Sbjct: 2708 RCISEQWKCDNDNDCGDNSDELQSVCAFHTCPPTAFTCANGRCVQYHYRCDYYNDCGDNS 2767
Query: 209 --------------QFSCGMGKCIPESWKCDGFVDCLEDG-SDEPNTCIHQCFNGQVQCA 253
+F+C G+CIP+S+ CDG +C ++G SDE N C G +C
Sbjct: 2768 DEEGCLFRNCNSTTEFTCSNGRCIPQSFVCDGRNNCYDNGTSDERNCPPRTCSPGFTKCQ 2827
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCD 311
+ CIP +LCD + DC D +DE+ + H C N + QC S +CIP +W CD
Sbjct: 2828 STNICIPRLYLCDGDNDCG-----DLSDENPTFCTTHTCRNTEFQCT-SGRCIPQHWHCD 2881
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+E+DC D +DE + C E RC S +C+ CDG DC + D
Sbjct: 2882 QEVDCP-----DGSDE--PASCAQPPRTCSSQEFRC-DSGRCIPKDWICDGANDCGDMSD 2933
Query: 372 E 372
E
Sbjct: 2934 E 2934
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPH 261
+ C QF+C G+CI E WKCD DC ++ + + C H C CA + +C+ +
Sbjct: 2695 SRCVASQFTCLNGRCISEQWKCDNDNDCGDNSDELQSVCAFHTCPPTAFTCA-NGRCVQY 2753
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++ CD DC DN+DE+ F C + + +CIP +++CD +C +
Sbjct: 2754 HYRCDYYNDCG-----DNSDEEGCLFRNCNSTTEFTCSNGRCIPQSFVCDGRNNCYDNGT 2808
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D + C P +C S+N C+ CDG DC + DE P
Sbjct: 2809 SDERNCP--------PRTCSPGFTKCQSTNICIPRLYLCDGDNDCGDLSDENPTFCTTHT 2860
Query: 382 CENLK---CSHKCSP 393
C N + S +C P
Sbjct: 2861 CRNTEFQCTSGRCIP 2875
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 112/256 (43%), Gaps = 35/256 (13%)
Query: 156 VDGSHNA---VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQ 209
VDGS A C ++ +C N C++ CDG CS+ DE C +
Sbjct: 1172 VDGSDEAGCVFNCTNSQFKCADGNGCISNINRCDGVFHCSDNSDEAGCPTRPPGMCHSDE 1231
Query: 210 FSCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
F C G CIP+ W+CDG DC+ DGSDE + CI + C Q C + CIP +WLCD
Sbjct: 1232 FQCQADGYCIPDVWECDGHSDCV-DGSDEHHGCIPKTCAPSQFHCD-NGNCIPKHWLCDG 1289
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC D+ D D FH C + Q QC C+ + LCD DC + TDE
Sbjct: 1290 DNDCR--DLSDEKDCPTQPFH-CPSWQWQCPGYSICVNLSALCDNVFDCP-----NGTDE 1341
Query: 328 ----------DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D++ +H + C Q SK C+ +C D FC
Sbjct: 1342 SPLCNQASCSDFNGGCTHQCIQGPFGASCLCPLGYQLANDSKTCEDIDEC----DNPGFC 1397
Query: 377 NNKADCENLKCSHKCS 392
+ C N++ S +CS
Sbjct: 1398 SQH--CFNMRGSFRCS 1411
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 171/479 (35%), Gaps = 128/479 (26%)
Query: 40 TDEDWDKYFKRILNGT-------------HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQ 86
+D D +K+ ++GT +LA ++ RN ++VS +RL
Sbjct: 755 SDTSRDMIYKQKIDGTGREILTANRVENVESLAFDWISRNLYWIDTSYKSVSVMRLADKS 814
Query: 87 INDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
++ + P A + P+ ++ +A G + P+V I WP+ L I
Sbjct: 815 RRTIVEHLNNPRAIVVHPISGYIFFSDWFRPAKIMRAWCDGSHLVPIVNTTIGWPNGLAI 874
Query: 135 DYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHP--------------------- 167
D+ LYW D+ +T+E DG S + HP
Sbjct: 875 DWGALRLYWVDAFFDTIEHSTFDGLDRKRLSRIQQMTHPFGITVFQDYVFVTDWMLQGII 934
Query: 168 ----------NELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTP- 207
+R G SN S FC G+P NG+ C+ C P
Sbjct: 935 QVRKTDGRQVTVIRSGISNIMHVKSYDVNIQTGSNFC-GQPTHPNGD-----CSHFCFPV 988
Query: 208 --GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLC 265
Q CG C + C + + EP T QC + C + +C+P + C
Sbjct: 989 PNFQRVCG---CPYGMRLASNHLTCEGNQASEPPT--QQCGSFSFSCD-NGRCVPSYYRC 1042
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTD 319
D DC DN+DE H C C+ S +CIP +W CD+ DC
Sbjct: 1043 DGFNDCH-----DNSDE-----HLCGTSNNTCSPSAFTCDHGECIPAHWRCDKHNDC--- 1089
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
VD +DE SH C C +N C+ + CD DC +G DE
Sbjct: 1090 --VDGSDE--RNCPSHTPASCPAWAYTC-DNNACIPRNWVCDTDNDCGDGSDE------- 1137
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS----CDQTCTNTHL 434
+N + C P + CP + + D D +DGS C CTN+
Sbjct: 1138 ---KNCHSTGTCQP----SQFHCPDHRCLDPAYVCDGDRDCVDGSDEAGCVFNCTNSQF 1189
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 111/280 (39%), Gaps = 48/280 (17%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +DY D+LYW D+ L +E + G+ V+
Sbjct: 2526 NAKIERATLGGNFRVPIVNTSLVWPNGLTLDYETDLLYWADASLRKIERSTLTGTEREVI 2585
Query: 165 CHPNELRCGSS--NQCVALSKFCDGKPDCSN---GEDEGPFCNAECTPGQFSCGMGKCIP 219
+ G + +Q + + K +N G D+ + C + K
Sbjct: 2586 VNTAFHAFGLTVYDQYIYWTDLYTQKIYRANKYDGSDQIAMTTNLPMRPKGICTVVK--H 2643
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPHN---WLCDEEMDCS 272
+ +C D G C H C G + QC PH +L + C
Sbjct: 2644 QQRQCSNPCDQFNGG------CSHICVPGPNGAECQC-------PHEGQWYLANNNKHC- 2689
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
IVD+ +C Q C L+ +CI W CD + DC DN+DE
Sbjct: 2690 ---IVDSGS-------RCVASQFTC-LNGRCISEQWKCDNDNDCG-----DNSDELQSVC 2733
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H C P C ++ +CV CD DC + DE
Sbjct: 2734 AFHT---CPPTAFTC-ANGRCVQYHYRCDYYNDCGDNSDE 2769
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E A M+GE+R+ LV++++ WP+ L IDY N D +YW D + +E+++ DG+ +
Sbjct: 4200 EPKIESAWMNGEHRNVLVSEDLGWPTGLSIDYLNNDQIYWSDLKEDIIETMKYDGTDRRI 4259
Query: 164 LCH 166
+ H
Sbjct: 4260 ITH 4262
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW D + +E+V DG +
Sbjct: 532 EPKLERAFMDGSNRKDLVKTKLGWPAGITLDMISKRIYWVDCRYDYIETVTYDGVQRKTV 591
Query: 165 CHPNEL 170
L
Sbjct: 592 MRGGSL 597
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
R+E+A M G R+ ++ I P L IDY ++Y+ DS+L+ ++ G H
Sbjct: 1575 RIERASMDGSLRTIIIQDKIVLPCGLTIDYPNRLIYFMDSYLDYIDVCDYYGHH 1628
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 114 HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+G +R ++ + S+ +D+ LYW D L T+E R+DGS+ VL N
Sbjct: 1493 NGTDRRVVLDSGVVMTQSIAVDWVGRNLYWTDYALETIEVSRIDGSYRTVLISKN 1547
>gi|444721558|gb|ELW62289.1| Low-density lipoprotein receptor-related protein 2 [Tupaia
chinensis]
Length = 4056
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 132/361 (36%), Positives = 172/361 (47%), Gaps = 39/361 (10%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGK 188
P+S V DY QD D N + C +++ C S+ QC+ CD
Sbjct: 56 PTSWVCDYEQDCEDGSDEQQNC----------SGRTCSSDQITC-SNGQCIPGEYRCDHV 104
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248
DC++G DE C Q +C G C S KCDG DC D SDE N C C +
Sbjct: 105 RDCADGTDERDCRYPACE--QLTCASGACYNTSQKCDGKADC-RDFSDEVN-CSAVCMHN 160
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+ +C S +CIP +++CD DC DN+DE + C Q C S +CI NW
Sbjct: 161 EFRCG-SGECIPRSYVCDHASDCE-----DNSDEHSCNYQSCKGEQFTCP-SGQCIHQNW 213
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD E DC DN DE + SH+ C+P E C S QC+ +SK CDG DC +
Sbjct: 214 VCDGENDCR-----DNGDEKGCESSSHHFHNCYPREWACPESGQCILISKVCDGILDCPD 268
Query: 369 GEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT---QCVDADECL 420
G+DE G +C C L C ++C TP G C CP G NK CV D+C
Sbjct: 269 GDDENSTTAGKYCGLTM-CSALNCEYECHKTPGGGACVCPPGYIINKNDSRTCVAFDDCQ 327
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
I G CDQ C N + C C EGY L G+ C A N +P SI+FS+ D+ ++
Sbjct: 328 IWGICDQKCENRGDHHQCLCEEGYILE-HGRHCKA-NESSGKP-SILFSNGWDLLIGDIH 384
Query: 481 G 481
G
Sbjct: 385 G 385
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 107/324 (33%), Positives = 137/324 (42%), Gaps = 53/324 (16%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+N C++ CD DC +G DE + C P QF C +CI + CDG DC DG
Sbjct: 1093 NNVCISRDWVCDTDNDCGDGSDEKNCKSGTCRPSQFQCSDHRCIDPLYVCDGDKDC-ADG 1151
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW---DKFHQCF 291
SDE C++ C Q +CA + CI + + CD DC+ DN+DE C
Sbjct: 1152 SDEAG-CVYNCTASQFKCANGEGCINNMYRCDGVFDCN-----DNSDEAGCPTRPPGMCH 1205
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDC----------------------------------- 316
+ QC CIP W CD DC
Sbjct: 1206 LDEFQCQGDGTCIPDTWECDGHPDCIQGSDEHHGCVPKTCPSSHFSCDNGHCIYKEWLCD 1265
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+D D +DE K C + +C + CV LS CDG DC NG DE P C
Sbjct: 1266 GDNDCGDMSDE---KDCPTQPFYCPSWQWQCPGLSICVNLSSVCDGVSDCPNGTDESPLC 1322
Query: 377 NNKA-DCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNT 432
N + N C+H+C P GA C CP G N +KT C D DEC + C Q C NT
Sbjct: 1323 NQDSCSDANGGCTHECIQGPFGAQCLCPEGYRLANDSKT-CEDIDECAVLSFCSQHCYNT 1381
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAV 456
S+ C C + Y L DG++C
Sbjct: 1382 RGSFRCWCDKDYRLEGDGRTCKVT 1405
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 111/342 (32%), Positives = 155/342 (45%), Gaps = 46/342 (13%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN--GEDEGPFCNAE-CTPGQFSC---- 212
H+ C +E +C S +C++ CDG DC + EDE C C+ +F C
Sbjct: 2899 HHEQTCLSDEFKC-DSGRCISREWICDGDNDCGDMSDEDERHHCEKRNCSRSEFFCINSR 2957
Query: 213 -GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMD 270
+CIP SW CDG DC D DE C + C + CA + CI +++ CD D
Sbjct: 2958 PPARRCIPLSWVCDGDADC-SDAYDEHQNCTRRSCAENEFTCA-NGLCILNSFRCDWRND 3015
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D +DE + C Q C + +CI ++CD + DC D++DE
Sbjct: 3016 CG-----DFSDERNCSYPTCHEHQFTCQ-NGRCINEAYVCDGQNDCG-----DDSDE--- 3061
Query: 331 KYFSHNAVLCH-------PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADC 382
SH LCH P++ +C + C+ + K C+ DCS+ DE G N D
Sbjct: 3062 --LSH---LCHTPEATCPPHQFKC-DNGHCIEMVKVCNHLDDCSDNSDEKGCGINECQDP 3115
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCS 439
C H C+ TP C C G +K CVD DEC C Q C N SY+C
Sbjct: 3116 SISGCDHNCTDTPTSFYCSCLPGYKLMSDKRTCVDIDECKETPFVCSQKCENVVGSYICK 3175
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3176 CAAGYIREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTVDG 3214
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 103/227 (45%), Gaps = 45/227 (19%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP +W+CDG DC +D SDE C H C G QC +CIP +W
Sbjct: 2 ECDNQHFRCGNGHCIPSAWRCDGTKDCSDD-SDEAG-CSHSCQVGYFQCQSGGECIPTSW 59
Query: 264 LCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+CD E DC D +DE + C + Q+ C+ + +CIP + CD DC+
Sbjct: 60 VCDYEQDCE-----DGSDEQQNCSGRTCSSDQITCS-NGQCIPGEYRCDHVRDCA----- 108
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------- 372
D TDE +Y + + C +S C S+ CDGK DC + DE
Sbjct: 109 DGTDERDCRYPACEQLTC--------ASGACYNTSQKCDGKADCRDFSDEVNCSAVCMHN 160
Query: 373 ------------GPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQ 406
C++ +DCE+ H C+ +G CP+GQ
Sbjct: 161 EFRCGSGECIPRSYVCDHASDCEDNSDEHSCNYQSCKGEQFTCPSGQ 207
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C G+F C G C
Sbjct: 3509 MCSSTQFLCANNEKCIPIWWKCDGQRDCSDGSDEVALCPQRFCRLGEFQCKDGNCTKPQS 3568
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE + H+C + QCA +K+CI W CD + DD DN+
Sbjct: 3569 ICNAQKDC-PDGSDEDHVLCENHRCEPNEWQCA-NKRCISDAWQCD-----TVDDCGDNS 3621
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D +DE + S
Sbjct: 3622 DEDSSHCASRTCQPGQFKCA-NGRCIPQTWKCDVDDDCG-----DQSDEPLQECMSPAYR 3675
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +CV C+G DC + DE
Sbjct: 3676 CDNHTEFSCKTNYRCVPWWAVCNGFDDCRDNSDE 3709
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 119/284 (41%), Gaps = 78/284 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C PNE +C ++ +C++ + CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3592 CEPNEWQC-ANKRCISDAWQCDTVDDCGDNSDEDSSHCASRTCQPGQFKCANGRCIPQTW 3650
Query: 223 KCD---------------------------------------------GFVDCLEDGSDE 237
KCD GF DC D SDE
Sbjct: 3651 KCDVDDDCGDQSDEPLQECMSPAYRCDNHTEFSCKTNYRCVPWWAVCNGFDDC-RDNSDE 3709
Query: 238 PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
C +G+ +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3710 QGCEAMTCKSSGEFRCK-NHHCIPLRWRCDRQDDCG-----DNSDEEDCVPRECTESEFR 3763
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
CA +++CIP W+CD + DC DN+DE CHP+ +C +S CV
Sbjct: 3764 CA-NQQCIPSRWICDHDNDCG-----DNSDER-----DCEMRTCHPDYFQC-TSGHCVPN 3811
Query: 357 SKFCDGKPDCSNGEDE---------GPFC-NNKADCENLKCSHK 390
CDG DC + DE G +C +C+N C K
Sbjct: 3812 RFKCDGIADCLDASDEASCPTRFPNGAYCPTTMFECKNHVCVQK 3855
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 136/340 (40%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+HL +E ++G H +
Sbjct: 3344 IARVGMDGTNKSVIISSKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGRHRHTVYD- 3402
Query: 168 NELRCGSSNQCVALSKFCDG------------KPDCSNGEDEGPFCNAECTPGQFS---- 211
G+ + A++ F D K + +G D N P
Sbjct: 3403 -----GTLSHPFAMTIFEDSVYWTDWNTRTVEKGNKYDGSDRTTLVNTTHRPFDIHVYHP 3457
Query: 212 ---------CG----------MGKCIPESWKC---DGFVDCLEDGSDEPNTCIHQCFNGQ 249
CG + K + + C D F ++G+ C C + Q
Sbjct: 3458 YRQPIVSNPCGTNNGGCSHFCLIKAGGKGFTCECPDDFQTIQQNGN---TYCQPMCSSTQ 3514
Query: 250 VQCALSKKCIPHNWLCDEEMDCS--TDDIV------------------------------ 277
CA ++KCIP W CD + DCS +D++
Sbjct: 3515 FLCANNEKCIPIWWKCDGQRDCSDGSDEVALCPQRFCRLGEFQCKDGNCTKPQSICNAQK 3574
Query: 278 ---DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED + H+C + QCA +K+CI W CD + DD DN+DED
Sbjct: 3575 DCPDGSDEDHVLCENHRCEPNEWQCA-NKRCISDAWQCD-----TVDDCGDNSDEDSSHC 3628
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C P + +C ++ +C+ + CD DC + DE
Sbjct: 3629 ASRT---CQPGQFKC-ANGRCIPQTWKCDVDDDCGDQSDE 3664
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 131/340 (38%), Gaps = 67/340 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
E RC ++ C+ L CD + DC + DE ECT +F C +CIP W CD
Sbjct: 3722 EFRC-KNHHCIPLRWRCDRQDDCGDNSDEEDCVPRECTESEFRCANQQCIPSRWICDHDN 3780
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
DC D SDE + + C QC S C+P+ + CD DC +D +DE +
Sbjct: 3781 DC-GDNSDERDCEMRTCHPDYFQCT-SGHCVPNRFKCDGIADC-----LDASDEASCPTR 3833
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
F NG +C H +C ++ D D + + P R
Sbjct: 3834 FP---NGAYCPTTMFECKNH--VCVQKFWQCDGDDDCGDGSDEELHLCLTVPCESPQRFR 3888
Query: 347 CGSSNQCVALSKFCDGKPDCSNGED---------------EGPF-CNN------------ 378
C +N+C+ K CDG +C +G D EG F C+N
Sbjct: 3889 C-DNNRCIYSHKLCDGVDNCGDGSDEKKEHCRTPTSRPCTEGEFKCSNGNCISEQNVCDD 3947
Query: 379 -----------------KADCENLKCSHKCSPTPRGA-MCFCPAGQNP---NKTQCVDAD 417
+ C C H C+ G +C C +G ++ C D +
Sbjct: 3948 VDDCGDGFDETGCNIGKERTCAENICEHNCTQLSEGGFICSCRSGFKAGILDRNSCYDIN 4007
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTA 455
EC G C Q C NT SY CSC +G+ D GK C A
Sbjct: 4008 ECEQFGVCPQKCHNTKGSYECSCADGFKSMSDHYGKRCAA 4047
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 32/230 (13%)
Query: 157 DGSHNAVLC-----HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQ 209
DGS LC E +C N C C+ + DC +G DE N C P +
Sbjct: 3538 DGSDEVALCPQRFCRLGEFQCKDGN-CTKPQSICNAQKDCPDGSDEDHVLCENHRCEPNE 3596
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEE 268
+ C +CI ++W+CD DC ++ ++ + C + C GQ +CA + +CIP W CD +
Sbjct: 3597 WQCANKRCISDAWQCDTVDDCGDNSDEDSSHCASRTCQPGQFKCA-NGRCIPQTWKCDVD 3655
Query: 269 MDCSTDDIVDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
DC D +DE + ++C N + C + +C+P +C+ DD D
Sbjct: 3656 DDCG-----DQSDEPLQECMSPAYRCDNHTEFSCKTNYRCVPWWAVCN-----GFDDCRD 3705
Query: 324 NTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DE A+ C + E RC ++ C+ L CD + DC + DE
Sbjct: 3706 NSDEQ-----GCEAMTCKSSGEFRC-KNHHCIPLRWRCDRQDDCGDNSDE 3749
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 80/180 (44%), Gaps = 33/180 (18%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-------FNGQVQCALSK 256
+C F C G+C+P ++CDGF DC D SDE H C + CA
Sbjct: 999 QCGSFSFPCNNGRCVPSHYRCDGFDDC-HDNSDE-----HLCGTSNTSCSSSSFTCAHGG 1052
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+CIP W CD DC +D +DE C C + CI +W+CD +
Sbjct: 1053 QCIPARWRCDNHFDC-----MDESDEQNCPTRAPASCAESYFTCD-NNVCISRDWVCDTD 1106
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE K + C P++ +C S ++C+ CDG DC++G DE
Sbjct: 1107 NDCG-----DGSDEKNCK-----SGTCRPSQFQC-SDHRCIDPLYVCDGDKDCADGSDEA 1155
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 131/347 (37%), Gaps = 87/347 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-----------------------NQDIL 141
+ ++E+A + G R P+V ++ WPS LV+D+ N++I+
Sbjct: 2503 NAKIERATLGGNFRMPIVNSSLVWPSGLVLDHEDDLLYWADASLQKIERSSLTGTNREII 2562
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVL-----CHPNELRCGSSNQC 178
YW D + V + DGS + P + NQ
Sbjct: 2563 VSAVFHIFGLTLYDQYIYWTDFYTKKVYRANKYDGSGQIAMTTSMPVQPKGISTVVKNQQ 2622
Query: 179 VALSKFCDG-KPDCSNGEDEGP--------------------FC----NAECTPGQFSCG 213
S CD CS+ GP +C C F+C
Sbjct: 2623 QQCSNPCDQFNGGCSHICVPGPNGVECQCPHEGHWYLANNNKYCIVDNGQRCNASFFTCL 2682
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKCI + WKCD DC + + N C H C CA + +C+ + + CD DC
Sbjct: 2683 NGKCISKEWKCDNDDDCGDGSDELENVCAFHTCQPTAFTCA-NGRCVQYRYRCDYYDDCG 2741
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE+ F +C +++CIP ++C+ +C ++ D + D+
Sbjct: 2742 -----DNSDEEGCLFAECNATTEFTCNNRRCIPLEFVCNGVNNCHDNETSDEKNCP-DR- 2794
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNN 378
C +C ++N C+ CDG DC + DE P +C N
Sbjct: 2795 ------TCQSGYTKCQNTNICIPRVYLCDGDNDCGDMSDESPTYCKN 2835
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 48 FKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER 107
F + T T+A+++ RN + + + + +L S +L P LD R
Sbjct: 1478 FDSSITMTETIAIDWIGRNLYWTDYATETIEVSTIDGSH-RTVLISKNLTNPRGLALDPR 1536
Query: 108 L----------------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
+ E+A M G R+ +V + I WP+ L IDY ++Y+ DS+L+ +
Sbjct: 1537 MNEHVLFWTDWGRHPRIERASMDGSLRTVIVQEKIYWPTGLTIDYPNRLIYFMDSYLDFI 1596
Query: 152 ESVRVDGSH-------NAVLCHPNEL 170
+ DG H + V+ HP L
Sbjct: 1597 DFCDYDGQHRRQVIASDLVIRHPYTL 1622
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 25/156 (16%)
Query: 40 TDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVSSVRLRCAQ 86
+D D +K+ +NGT L N +SL F +++S +RL
Sbjct: 732 SDTSKDMIYKQKINGTGREILTANRVENVESLTFDWISKNLYWTDPTHKSISVMRLADKS 791
Query: 87 INDLLNSWDLP--------APEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
+LN+ + P A IF D ++ +A G + P+V + WP+ L I
Sbjct: 792 RRAILNNLNSPRAIVVHPIAGYIFFTDWFRPAKIMRAWSDGSHLLPIVNTTLGWPNGLAI 851
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
D++ LYW D+ N +E DG L H ++
Sbjct: 852 DWSALRLYWVDAFFNKIEHSTFDGVDRRKLDHIQQM 887
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
++E+A M G NR LV + WPS + +D +YW D + +E+V DG S
Sbjct: 511 KVERAFMDGSNRKVLVKTKLGWPSGITLDLASKRVYWLDCRFDYIETVTYDGIERKTVVS 570
Query: 160 HNAVLCHPNEL 170
+++ HP E+
Sbjct: 571 GGSLIPHPFEI 581
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 52 LNGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI------- 101
+NG +A+++ N F + + +R+ LL + D+P +
Sbjct: 2118 VNGVRGIAVDWLAGNLYFTNAFASETLIEVLRINTTYRRVLLKATVDMPRHIVVDPRNRY 2177
Query: 102 -----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
+ ++E++ + NR+ LV++ I P L +D++ D +YW D L+ + +R
Sbjct: 2178 LFWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNDYIYWVDDSLDIIARIRF 2237
Query: 157 DGSHNAVL 164
DG + V+
Sbjct: 2238 DGEGSQVI 2245
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 44/111 (39%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + + S P G F Q + C D + G C+Q C +H
Sbjct: 602 NKFVDTNPQVYYHSSVRPYGVTVFHSLRQPYARNPCADNN-----GGCEQICVLSHRTDN 656
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C CT G+ L D + C AV ++FSS + +R I S
Sbjct: 657 GGLGYRCKCTFGFNLDTDERHCVAVE------KFLLFSSQLAVRGIPFTFS 701
>gi|357622730|gb|EHJ74141.1| hypothetical protein KGM_12959 [Danaus plexippus]
Length = 4358
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 147/311 (47%), Gaps = 22/311 (7%)
Query: 157 DGSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-M 214
+GSH A C + C + C+ S CDG DC + +DE C QF C +
Sbjct: 1113 EGSHCADKTCAYFQFTCPRTGHCIPASWVCDGDDDCFDKQDEADCPPVACLASQFKCADL 1172
Query: 215 GKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCF-NGQVQCALSKKCIPHNWLCDEEMD 270
+C+ E++KCDG DC DGSDE P HQC Q QCA S C+P W CD D
Sbjct: 1173 KQCVQEAYKCDGIPDC-NDGSDEAGCPALAPHQCAPERQFQCAASGLCVPRTWYCDGTPD 1231
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C D +DE C G +C + +C+ +CD DC D +DE
Sbjct: 1232 CE-----DLSDEPAGCGASACGAGHFRCD-NGRCVFRAAVCDGRDDCG-----DGSDEGL 1280
Query: 330 DKYFSHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C + +C G SN+CV +++ CD DC NG DEGP C+
Sbjct: 1281 QHACKPPPFRCPSGQWQCPGVSNRCVNITQVCDRNFDCPNGADEGPACDFDNCQRGATLC 1340
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
++C TP G +C CP+G+ N C D DEC G C Q CTNT SY CSC EGY L
Sbjct: 1341 NECIQTPEGPLCLCPSGEELESNGYTCKDIDECNPPGLCSQVCTNTKRSYFCSCVEGYQL 1400
Query: 447 RPDGKSCTAVN 457
PD SC A N
Sbjct: 1401 APDKHSCKANN 1411
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/317 (36%), Positives = 150/317 (47%), Gaps = 46/317 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM------ 214
C +L CG + C+ CD DC +G DE +C F CGM
Sbjct: 54 CEAGQLTCGQYVWNKTYCIPPHYRCDMHVDCVDGTDEADCTYRKCQTEDFQCGMEGAAAG 113
Query: 215 -----GKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
G CIP+ KCDG++DC G DE P I C Q +CA KC+ + CD
Sbjct: 114 KISSQGPCIPKEKKCDGYLDC-RTGKDEQDCPGQTI-ACRLDQFKCASGDKCVDASAKCD 171
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC DN+DE F C GQ +C + CIP ++ CD DCS D TD
Sbjct: 172 HKDDCG-----DNSDEAHCSFPPCHIGQFRCG-TALCIPASYRCDGYRDCS-----DGTD 220
Query: 327 EDWDKYFSHNAVLCHPNELRC-----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
E + +A+ C N+ C G ++C+A S+ CD K DC +G DE C+ +
Sbjct: 221 ER-----NCSAIACPDNKYLCPRGAPGGEHKCIARSQLCDNKRDCEDGADEEAACSTLS- 274
Query: 382 CENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C L+C +KC +P G C C +G + NKT CVD DEC G C Q C NT SY C
Sbjct: 275 CPALECEYKCVASPSGGACSCGSGLTLASDNKT-CVDRDECREWGPCHQLCINTPGSYNC 333
Query: 439 SCTEGYTLRPDGKSCTA 455
+C GYTL G +A
Sbjct: 334 ACAPGYTLGARGDCLSA 350
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 138/464 (29%), Positives = 189/464 (40%), Gaps = 127/464 (27%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ +I WP++L IDY D +YW D+HL+ + S ++G H
Sbjct: 3325 LQAYIGKMGMDGSNYTVILNWEDDIAWPNALTIDYFTDRIYWADAHLDYIGSADLEGKHR 3384
Query: 162 AVL--------CHPNELRC------------------------------GSSN-QCVALS 182
++ C P C G SN +C+
Sbjct: 3385 HIVLSGSKNGRCIPKLWMCDFDNDCGDDSDEPAYMCRQKNCTNGWRRCPGQSNYRCIPKW 3444
Query: 183 KFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE- 237
FCDGK DC +G DE P CN+E F+C +CIP+ W CD F D DGSDE
Sbjct: 3445 LFCDGKDDCRDGSDELPQNCPTCNSET---DFTCQNNRCIPKQWLCD-FTDDCGDGSDEV 3500
Query: 238 PNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+ C H +C + +C + KCI W CD E DC DNTDE +C NG
Sbjct: 3501 ESVCQHNYRECSESEFKCG-NGKCISSRWRCDHEDDCG-----DNTDEMECGGFKCKNGT 3554
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QC S CI + CD + DC D +DE C + +C S+N CV
Sbjct: 3555 FQCK-SGHCIAAYFRCDGDRDCR-----DLSDEIGCPPRFPGGRYCPESRFQC-SNNLCV 3607
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSP--------------TPR 396
A S CDG DC +G DE P +C+ L+ +H+C P +
Sbjct: 3608 AQSDLCDGTDDCGDGSDETPSICTNFNCDTLRRFHCDNHRCVPRYQVCDGVDNCGDGSDE 3667
Query: 397 GAMCFCPAGQNP---------NKTQCVD-------ADEC-----------------LIDG 423
M C A P QCV+ AD+C G
Sbjct: 3668 NNMTLCAARTKPCDPLTQFQCANRQCVNREKLCDLADDCGDSSDELGCHHAHSCSVQDKG 3727
Query: 424 SCDQTCTNTHL---------SYVCSCTEGYTL-RPDGKSCTAVN 457
C+ CTN L Y+C+C +G+ + + D K CT V+
Sbjct: 3728 GCEHFCTNLTLPDSSVPGTGGYICTCFQGWIISKADSKRCTDVD 3771
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 111/345 (32%), Positives = 156/345 (45%), Gaps = 51/345 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-------CNAE----CTPGQFSCG 213
C + C + N C+ CDG+ DC + DE C+AE C +F G
Sbjct: 2887 CFGDLFTCDNGN-CIPRIYICDGENDCLDNSDEDSRHQCNDRKCDAETEYTCEENKF-WG 2944
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN------GQVQCALSKKCIPHNWLCDE 267
+CIP+ W CDG DC+ DG+DE N+ IH C Q QC + +CI W+CD
Sbjct: 2945 RAQCIPKKWLCDGDPDCI-DGADE-NSTIHHCSTPTPCSEDQFQCN-NGRCINEGWVCDH 3001
Query: 268 EMDCSTDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVD 323
+ DC D +DE ++ QC + +C + KCI ++ CD E DC D VD
Sbjct: 3002 DNDCG-----DGSDEGKQCNTQYKQCSAQEFRCQ-NFKCIRTHFRCDGEDDCGDHSDEVD 3055
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--AD 381
E+ C + +C ++NQC+ C+ DC++ DE CN A
Sbjct: 3056 CMKEN---------KTCPTGQFKC-NNNQCIDNRLVCNKVSDCTDDSDEPAHCNVDECAK 3105
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVC 438
E +C HKC T G C C G + C D DECL G C Q C+NT SY C
Sbjct: 3106 LEIHQCGHKCIDTLTGYYCECNQGYKLLSDGKACADIDECLETPGVCSQYCSNTPGSYYC 3165
Query: 439 SCTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C E Y R D +C + + A IIF++ +R + + +
Sbjct: 3166 KCNEQYYEREADEHTCKRKD---NTTAWIIFTNKYYVRNMSTDAT 3207
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/356 (30%), Positives = 144/356 (40%), Gaps = 77/356 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2802 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCAQRTCPQNSFRCPNHRCIPATW 2861
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P C + CF C + CIP ++CD E DC +DN
Sbjct: 2862 YCDGDDDCGDGADEPPEYCRSEGRTCFGDLFTCD-NGNCIPRIYICDGENDC-----LDN 2915
Query: 280 TDEDWDKFHQC------FNGQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + C +K +CIP WLCD + DC +D DE+
Sbjct: 2916 SDED--SRHQCNDRKCDAETEYTCEENKFWGRAQCIPKKWLCDGDPDC-----IDGADEN 2968
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C ++ +C ++ +C+ CD DC +G DEG CN +
Sbjct: 2969 STIHHCSTPTPCSEDQFQC-NNGRCINEGWVCDHDNDCGDGSDEGKQCNTQYKQCSAQEF 3027
Query: 382 -CENLKCSHK---------CSPTPRGAMCF-----CPAGQNP-NKTQCVD---------- 415
C+N KC C C CP GQ N QC+D
Sbjct: 3028 RCQNFKCIRTHFRCDGEDDCGDHSDEVDCMKENKTCPTGQFKCNNNQCIDNRLVCNKVSD 3087
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC L C C +T Y C C +GY L DGK+C ++
Sbjct: 3088 CTDDSDEPAHCNVDECAKLEIHQCGHKCIDTLTGYYCECNQGYKLLSDGKACADID 3143
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 152/373 (40%), Gaps = 53/373 (14%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGK 188
P + D+ D C + VESV HN C +E +CG+ +C++ CD +
Sbjct: 3482 PKQWLCDFTDD----CGDGSDEVESV---CQHNYRECSESEFKCGNG-KCISSRWRCDHE 3533
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-----TCIH 243
DC + DE +C G F C G CI ++CDG DC D SDE
Sbjct: 3534 DDCGDNTDEMECGGFKCKNGTFQCKSGHCIAAYFRCDGDRDC-RDLSDEIGCPPRFPGGR 3592
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS-----TDDIVDNTDEDWDKFHQCFNGQVQCA 298
C + QC+ + C+ + LCD DC T I N + D + C N
Sbjct: 3593 YCPESRFQCS-NNLCVAQSDLCDGTDDCGDGSDETPSICTNFNCDTLRRFHCDN------ 3645
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALS 357
+C+P +CD D+ D +DE+ + C P + +C ++ QCV
Sbjct: 3646 --HRCVPRYQVCD-----GVDNCGDGSDENNMTLCAARTKPCDPLTQFQC-ANRQCVNRE 3697
Query: 358 KFCDGKPDCSNGEDEGP-------FCNNKADCE----NLKCSHKCSPTPRGAMCFCPAG- 405
K CD DC + DE +K CE NL P G +C C G
Sbjct: 3698 KLCDLADDCGDSSDELGCHHAHSCSVQDKGGCEHFCTNLTLPDSSVPGTGGYICTCFQGW 3757
Query: 406 --QNPNKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
+ +C D DEC C CTN + SY CSC +G+ L S + + ++
Sbjct: 3758 IISKADSKRCTDVDECATGAHHCSHICTNLNGSYSCSCKDGFRL---ADSLSGICKVMED 3814
Query: 463 PASIIFSSTVDIR 475
++F++ +IR
Sbjct: 3815 EVVLMFANGPEIR 3827
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 137/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ + G +R L++ I +P ++ + D +YW D L N V
Sbjct: 2551 VREKIERSKLDGTDREVLISATI-YPFAITV--FGDYIYWTDLQLRGVYRAEKHTGANMV 2607
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCV----ALSKFCDGKP---------DCSNGEDE 197
E V R++ S + + + N C + C P D + +E
Sbjct: 2608 EIVKRLEDSPRDIHIYSTSRQKCQKNPCKISNGGCAHSCHPAPNNTVECKCDDNTKLVNE 2667
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++ N C H C + +C
Sbjct: 2668 GRMCVAKNLTCDASKFFCANGKCISRMWSCDGDDDCGDNSDEDKNYCAYHSCSPNEFRCN 2727
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C +G+ C L+ +CIP +C+
Sbjct: 2728 -NGRCIFKTWKCDHENDCK-----DGSDEEGCVYPPCADGEFTC-LNSRCIPKTQVCNGI 2780
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC DN D C N L+C +N CV CDG DC + DE
Sbjct: 2781 NDCK-----DNVTSDETHEMCPRNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2835
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2836 PLHCAQRTCPQNSFRCPNHRCIPA 2859
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C ++ +C S ++CV S CD K DC + DE C GQF CG CIP S
Sbjct: 147 TIACRLDQFKCASGDKCVDASAKCDHKDDCGDNSDEAHCSFPPCHIGQFRCGTALCIPAS 206
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-----KCIPHNWLCDEEMDC 271
++CDG+ DC DG+DE N C + + C KCI + LCD + DC
Sbjct: 207 YRCDGYRDC-SDGTDERNCSAIACPDNKYLCPRGAPGGEHKCIARSQLCDNKRDC 260
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 106/263 (40%), Gaps = 69/263 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP++ C
Sbjct: 2719 CSPNEFRC-NNGRCIFKTWKCDHENDCKDGSDEEGCVYPPCADGEFTCLNSRCIPKTQVC 2777
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2778 NGINDCKDNVTSDETHEMCPRNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2832
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2833 DEDPLHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCGDGADEPPEYCRSEGRTCFGDLF 2892
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------DKYFSHNAVLCHPNELRCGS 349
C + CIP ++CD E DC +DN+DED K + C N+
Sbjct: 2893 TCD-NGNCIPRIYICDGENDC-----LDNSDEDSRHQCNDRKCDAETEYTCEENKF--WG 2944
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
QC+ CDG PDC +G DE
Sbjct: 2945 RAQCIPKKWLCDGDPDCIDGADE 2967
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 87/227 (38%), Gaps = 70/227 (30%)
Query: 210 FSCGMGKCIPESW----------------------------------------KCDGFVD 229
F+C +C+P SW KCD D
Sbjct: 1008 FTCDNQRCVPRSWLCDGDDDCLDNSDEMQNCTKTTCSASEFMCKSGRCIPATFKCDSEND 1067
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDK 286
C D SDE C Q QC + +C+P+ W CD E DC D +DE DK
Sbjct: 1068 C-GDFSDEIGCVNVTCSASQFQCG-NGRCVPNTWKCDSENDCG-----DGSDEGSHCADK 1120
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C Q C + CIP +W+CD + DC D DE V C ++ +
Sbjct: 1121 --TCAYFQFTCPRTGHCIPASWVCDGDDDC-----FDKQDE-----ADCPPVACLASQFK 1168
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
C QCV + CDG PDC++G DE A C L H+C+P
Sbjct: 1169 CADLKQCVQEAYKCDGIPDCNDGSDE-------AGCPAL-APHQCAP 1207
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G R P++T+NI+ P+ L ID D +YW D+ LNT+E ++ DG++ V+
Sbjct: 3968 KIEIAWMDGSQRRPIITENIRHPTGLAIDQAMDHAIYWADAKLNTIEMMKHDGTNRRVIL 4027
Query: 166 HPNELR 171
+ L+
Sbjct: 4028 KGDFLK 4033
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + ++ K++ PS L ID++ ++LYW D+ +E ++DG+
Sbjct: 2506 FGTSGKIYRTTMAGSLKKAIIDKDLSQPSGLTIDFDDNMLYWTDAVREKIERSKLDGTDR 2565
Query: 162 AVL 164
VL
Sbjct: 2566 EVL 2568
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQ 75
+ N E + S ++ V+ DW + Y+ GT + N + +
Sbjct: 739 VHRNGTTREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNFSYKRTLLKDLK 798
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
++ + + + WD PA + +A G + WP+ L ID
Sbjct: 799 RPRAIVVHPNRGYIFFSEWDRPA--------NISRANTDGTGLLVFENVTLGWPNGLSID 850
Query: 136 YNQDILYWCDSHLNTVESVRVDGS 159
+ D +YWCD+ L+ V+ ++DG+
Sbjct: 851 FEADRVYWCDALLDHVQHAKLDGT 874
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1554 RIERVGMDGTQRMAIINTKIYWPNGLTLDTATQRVYFADSKLDFIDFCYYNGTGRQQVLA 1613
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1614 GSHYLLHPHSL 1624
>gi|332024241|gb|EGI64445.1| Low-density lipoprotein receptor-related protein 2 [Acromyrmex
echinatior]
Length = 4558
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 160/344 (46%), Gaps = 60/344 (17%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM-GKCIPE 220
V C N+ C ++N+C+ + CD + DC + DEG FC A+ C+ QF+C G CIP+
Sbjct: 1056 VTCSANQFAC-ANNRCIPATWKCDSENDCGDSSDEGEFCAAKTCSYFQFTCPRSGHCIPQ 1114
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC D DE + C + Q C K C+ ++ CD DC +D D
Sbjct: 1115 SWVCDGDSDCF-DRQDEMDCPPVTCLSTQFTCVDRKMCVLASYKCDGISDC--NDGSDEV 1171
Query: 281 DEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDC----------------------- 316
QC + Q QC +S CIP +W CD DC
Sbjct: 1172 GCPSLAPDQCNTDKQFQCVISGICIPKSWHCDGTADCPDKSDEPESCGKVDCQTGFFRCR 1231
Query: 317 ------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS--------SNQCVAL 356
DD D +DED + + C P +C S N+CV
Sbjct: 1232 NERCVFKAYICDGKDDCGDGSDEDIELH------ACGPPTFKCDSQQWKCPNVKNRCVNT 1285
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQNPNKT-QC 413
+ CDGK DC NG DEGP C+ A+C ++ C++ C TP GA C CPAG+ N + C
Sbjct: 1286 TSVCDGKLDCPNGADEGPGCDT-AECHHQDGLCTNGCIQTPFGAQCICPAGEELNDSFTC 1344
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
D +EC DG C Q C NT SY CSC GYTL D +C A N
Sbjct: 1345 QDINECDPDGRCSQLCKNTKGSYYCSCVNGYTLDADKHTCKAFN 1388
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 116/343 (33%), Positives = 162/343 (47%), Gaps = 46/343 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---- 216
C ++ CG + C+ + CD DC +G DE +C P F C +G
Sbjct: 37 CEIGQITCGQYSFNKTYCIPPHQRCDMTVDCVDGTDEDGCTYRKCQPDDFRC-VGTTPEL 95
Query: 217 CIPESWKCDGFVDCLEDGSDEP---NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP+ KCDG++DC +G DE N C Q +C +++C+ C+ DC
Sbjct: 96 CIPKEKKCDGYLDC-RNGRDEERCENNMKPACRLDQFRCNTTQRCVEQAARCNHWDDCG- 153
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DE+ F C + Q +C ++ CIP + CD DC D +DE
Sbjct: 154 ----DNSDEEHCSFPPCTSDQFRC-VNALCIPIAYQCDGYKDCQ-----DGSDEK----- 198
Query: 334 SHNAVLCHPNELRC--GSSNQ---CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
S LC N+ C G+++ C+ S+ CDGK DC +G DE C+ C +L C
Sbjct: 199 SCTMTLCPGNKFMCPKGAADGKPLCINRSQLCDGKQDCEDGADEEAACSTSM-CGSLGCQ 257
Query: 389 HKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
HKC +P G +C+CP G+ N ++T CVD DEC G C+Q C NT Y C C GY
Sbjct: 258 HKCQASPTGGICYCPEGRILANDSRT-CVDRDECFEWGFCEQLCENTDGWYTCYCAPGYI 316
Query: 446 L------RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L R S + + QD A SST + RRI N +
Sbjct: 317 LHGVNKCRAQNTSSLELLLAQDR-AIWRLSSTAEDRRIIANAT 358
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 146/358 (40%), Gaps = 86/358 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2775 CPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPIHCAQRTCPQNSFRCPNHRCIPATW 2834
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +DN
Sbjct: 2835 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2888
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + + C +K +CIP WLCD + DC VD DE+
Sbjct: 2889 SDED--ERHQCNDRKCDEETEFTCTANKMWNRAQCIPKKWLCDGDPDC-----VDGADEN 2941
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C N+ C + +C+ S CD DC +G DE FCN +
Sbjct: 2942 VTLHHCPAPTPCSDNQFTC-KNGRCLNRSWLCDHDNDCGDGSDEDKFCNTQYKSCNSQEF 3000
Query: 382 -CENLKCSHK--------------------------CSPTPRGAMCFCPAGQNPNKTQCV 414
C+N KC K P P+ MC A N +Q V
Sbjct: 3001 TCQNFKCIRKQFRCDGQDDCGDHSDEVGCPSKGKNTTCPNPKDFMC---ANGNCIDSQLV 3057
Query: 415 -----------------DADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+ DEC + C Q C +T S+ C C GY L DGK+C
Sbjct: 3058 CNKEPDCADESDEPLHCNVDECARVEINQCGQKCVDTPTSFYCECNPGYKLLADGKAC 3115
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/342 (30%), Positives = 151/342 (44%), Gaps = 42/342 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPFCN-AEC-TPGQFSCGMGK---- 216
C + C + N C+ CDG DC ++ EDE CN +C +F+C K
Sbjct: 2860 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDERHQCNDRKCDEETEFTCTANKMWNR 2918
Query: 217 --CIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSKKCIPHNWLCDEEM 269
CIP+ W CDG DC+ DG+DE T H C + Q C + +C+ +WLCD +
Sbjct: 2919 AQCIPKKWLCDGDPDCV-DGADENVTLHHCPAPTPCSDNQFTCK-NGRCLNRSWLCDHDN 2976
Query: 270 DCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC D +DED ++ C + + C + KCI + CD + DC D++D
Sbjct: 2977 DCG-----DGSDEDKFCNTQYKSCNSQEFTCQ-NFKCIRKQFRCDGQDDCG-----DHSD 3025
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E N +P + C + N C+ C+ +PDC++ DE CN A E
Sbjct: 3026 EVGCPSKGKNTTCPNPKDFMCANGN-CIDSQLVCNKEPDCADESDEPLHCNVDECARVEI 3084
Query: 385 LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCT 441
+C KC TP C C G + C D DEC+ C Q C NT Y C C
Sbjct: 3085 NQCGQKCVDTPTSFYCECNPGYKLLADGKACDDIDECIETPQVCSQQCENTPGGYYCKCN 3144
Query: 442 EG-YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
E Y D +C + Q I+F++ +R + ++ S
Sbjct: 3145 ERWYEREADEHTCKRRDNVQ---PWIVFTNKYYVRNMSIDAS 3183
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +CV S CDG+ DC + DE C C+ +F C G+C+P ++ CD DC
Sbjct: 987 ANQRCVPKSWVCDGENDCLDNSDEMQNCTKPTCSANEFQCKSGRCVPMTFHCDSENDC-G 1045
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCF 291
D SDE C Q CA + +CIP W CD E DC D++DE ++ C
Sbjct: 1046 DYSDEMGCPNVTCSANQFACA-NNRCIPATWKCDSENDCG-----DSSDEGEFCAAKTCS 1099
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1100 YFQFTCPRSGHCIPQSWVCDGDSDC-----FDRQDE-----MDCPPVTCLSTQFTCVDRK 1149
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1150 MCVLASYKCDGISDCNDGSDE 1170
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 109/262 (41%), Gaps = 69/262 (26%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCI 218
A+ C E +C S+ +CV S CDG DC +G DE P N C P +FSC GKCI
Sbjct: 3561 ALECGELEFKCKSNGRCVHDSWKCDGDADCKDGSDEDPSICHNRVCDPSTEFSCKNGKCI 3620
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA----------------------- 253
P+ W CD DC +D SDEP Q C G +C
Sbjct: 3621 PKLWMCDSDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDGKDDCRDG 3679
Query: 254 -------------------LSKKCIPHNWLCDEEMDCSTDDIVDNTDED----WDKFHQC 290
+ +C+P WLCD DC D +DE DK+ QC
Sbjct: 3680 SDERPENCPKCDPTLDFKCTNNRCVPKQWLCDFADDCG-----DGSDEADAMCKDKYRQC 3734
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ +C + KCI W CD E DC DN+DE+ + +C + RC +S
Sbjct: 3735 SESEFKCK-NGKCIASRWRCDNEDDCG-----DNSDEE-----QCHQWVCKSDNFRC-AS 3782
Query: 351 NQCVALSKFCDGKPDCSNGEDE 372
C+A CDG DC + DE
Sbjct: 3783 GHCIASYLHCDGSRDCRDMSDE 3804
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 165 CHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPES 221
C + RCG ++ C+ CDG+ DC +G DE F C P F C C P
Sbjct: 3483 CTAGQHRCGPPDEKCIPWYWRCDGEKDCKDGTDESSFSCPPRICRPSFFQCANRNCTPSV 3542
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC D SDE C +C + +C + +C+ +W CD + DC D +D
Sbjct: 3543 TICDGIDDC-GDKSDEAK-CALECGELEFKCKSNGRCVHDSWKCDGDADCK-----DGSD 3595
Query: 282 EDWDKFHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
ED H + + C + KCIP W+CD + DC D++DE N
Sbjct: 3596 EDPSICHNRVCDPSTEFSCK-NGKCIPKLWMCDSDNDCG-----DDSDEPAYMCRQRN-- 3647
Query: 339 LCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
C RC G +N +C+ FCDGK DC +G DE P
Sbjct: 3648 -CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDERP 3684
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESW 222
+C P+ +C + N C CDG DC + DE C EC +F C G+C+ +SW
Sbjct: 3525 ICRPSFFQCANRN-CTPSVTICDGIDDCGDKSDEAK-CALECGELEFKCKSNGRCVHDSW 3582
Query: 223 KCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG DC +DGSDE P+ C ++ + + + + KCIP W+CD + DC D++
Sbjct: 3583 KCDGDADC-KDGSDEDPSICHNRVCDPSTEFSCKNGKCIPKLWMCDSDNDCG-----DDS 3636
Query: 281 DEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE Q C G +C + +CIP CD + DC D +DE N
Sbjct: 3637 DEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-----DGSDER-----PEN 3686
Query: 337 AVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P + +C ++N+CV CD DC +G DE
Sbjct: 3687 CPKCDPTLDFKC-TNNRCVPKQWLCDFADDCGDGSDEA 3723
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 145/339 (42%), Gaps = 50/339 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + +C+A CD + DC + DE C F C G CI C
Sbjct: 3734 CSESEFKC-KNGKCIASRWRCDNEDDCGDNSDEEQCHQWVCKSDNFRCASGHCIASYLHC 3792
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVD 278
DG DC D SDE N C + + G C S+ C+ N +CD TDD D
Sbjct: 3793 DGSRDC-RDMSDEIN-CTPR-YPGGRYCPQSRFQCNNNLCVSLNDICD-----GTDDCGD 3844
Query: 279 NTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
N+DE+ F + + QCA + KCI LCD D+ D +DE+
Sbjct: 3845 NSDENATMCANFQCDTHRRFQCA-NHKCIARYQLCD-----GIDNCGDGSDEN------- 3891
Query: 336 NAVLCHPNELRCG-------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENL 385
N +C C ++ +C+ K CD DC + DE C++ C +
Sbjct: 3892 NMTMCVKQTRPCDLITEYTCANKKCIDHLKLCDLADDCGDLSDE-LGCHHSHHCSDNDRG 3950
Query: 386 KCSHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSC 440
C+H C + + G +C C G N+ CVD DEC + C CTN + +Y CSC
Sbjct: 3951 GCAHVCHNLSDSGYICTCYPGYIISQDNRKHCVDVDECQTGNHQCSHICTNLNGTYACSC 4010
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G+ L + V +D+ ++F++ ++R L
Sbjct: 4011 RHGFQL---SDRHSGVCRAEDDNVVVLFANGPELRAYDL 4046
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 140/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV--------- 154
+ E++E++ + G++R LV+ I +P ++ + Y + I YW D L V
Sbjct: 2524 VREKIERSDLEGKHREILVSATI-YPFAITV-YKEHI-YWTDLQLRGVYRAEKHTGADKI 2580
Query: 155 ----RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD--------GKPDC-----SNGEDE 197
R++ S + + S N C + CD G P+C S +E
Sbjct: 2581 ELAKRLEDSPRDLHVFSGGRQICSVNPCNISNGGCDQSCHPGNNGLPECKCDDNSRLVNE 2640
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCA 253
C N C +F+C G+CI W CDG DC ++ + N C H C + +C
Sbjct: 2641 NRMCVPKNVTCDRNKFACRNGRCISRMWACDGDDDCGDESDENTNYCSHHSCSPNEFRCN 2700
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C +G+ C + +CIP + +C+
Sbjct: 2701 -NGRCIFKTWKCDHENDCR-----DGSDEEGCVYPPCASGEFTCT-NHRCIPQSQVCNGI 2753
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D D T E + C N L+C +N CV CDG DC + DE
Sbjct: 2754 NDCKDKDTSDETYERCPR-----NTTCPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2808
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2809 PIHCAQRTCPQNSFRCPNHRCIPA 2832
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEE 268
F+C +C+P+SW CDG DCL D SDE C C + QC S +C+P + CD E
Sbjct: 984 FTCANQRCVPKSWVCDGENDCL-DNSDEMQNCTKPTCSANEFQCK-SGRCVPMTFHCDSE 1041
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C Q CA + +CIP W CD E DC D++DE
Sbjct: 1042 NDCG-----DYSDEMGCPNVTCSANQFACA-NNRCIPATWKCDSENDCG-----DSSDE- 1089
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + A C + C S C+ S CDG DC + +DE
Sbjct: 1090 -GEFCA--AKTCSYFQFTCPRSGHCIPQSWVCDGDSDCFDRQDE 1130
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 121/293 (41%), Gaps = 83/293 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP+S C
Sbjct: 2692 CSPNEFRC-NNGRCIFKTWKCDHENDCRDGSDEEGCVYPPCASGEFTCTNHRCIPQSQVC 2750
Query: 225 DGFVDCL-EDGSDEP------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+G DC +D SDE NT C ++C + C+ WLCD + DC
Sbjct: 2751 NGINDCKDKDTSDETYERCPRNT---TCPLNHLKCEKTNICVEPYWLCDGDNDCG----- 2802
Query: 278 DNTDED-------------------------W--------------------DKFHQCFN 292
DN+DE+ W + CF
Sbjct: 2803 DNSDENPIHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFG 2862
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C ++
Sbjct: 2863 DLFTCD-NGNCIPRIYICDGDNDC-----LDNSDED-ERHQCNDRKCDEETEFTCTANKM 2915
Query: 352 ----QCVALSKFCDGKPDCSNGEDEG----------PFCNNKADCENLKCSHK 390
QC+ CDG PDC +G DE P +N+ C+N +C ++
Sbjct: 2916 WNRAQCIPKKWLCDGDPDCVDGADENVTLHHCPAPTPCSDNQFTCKNGRCLNR 2968
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 107/278 (38%), Gaps = 26/278 (9%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L IDY D ++W D+HL+ + ++G +
Sbjct: 3299 LQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEGHNR 3358
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
++ L+ S A++ F D + AE G +
Sbjct: 3359 RIV-----LKGASVPHVFAITVFDDFI--YWTDWNLKAISRAEKFSGAHLQVLRNTTHRP 3411
Query: 222 WKCDGFVDCLEDGSDEP-----NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ + + + P C H C + + + + C I
Sbjct: 3412 YDIHAYHPLRQLPYNNPCANNNGGCSHLCLIAPPASSYLLEGYGQPGVTSYKCKCPNQFI 3471
Query: 277 VDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+D D+ C GQ +C +KCIP W CD E DC D TDE FS
Sbjct: 3472 LDKDDKTC--IANCTAGQHRCGPPDEKCIPWYWRCDGEKDCK-----DGTDE---SSFSC 3521
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+C P+ +C + N C CDG DC + DE
Sbjct: 3522 PPRICRPSFFQCANRN-CTPSVTICDGIDDCGDKSDEA 3558
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ +++ + DGS
Sbjct: 1531 RIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFIDTCKYDGSQRLQVLA 1590
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1591 SSHYLLHPHSL 1601
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G R LVT+ I PSSL IDY + LYW DS L+T+E++ + G++ +
Sbjct: 4183 KIEIAWMDGARRKSLVTERIASPSSLTIDYAMEHTLYWSDSKLDTIEAISLAGTNRRTVL 4242
Query: 166 HPNELR 171
L+
Sbjct: 4243 KGRLLK 4248
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G N SP+VT I P L ID +YW DS L+T++ V G + ++
Sbjct: 2169 RIGKAFLDGSNWSPIVTSGISTPRDLTIDLATHDVYWVDSKLDTIQKVSYTGGNQEII 2226
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 11/135 (8%)
Query: 27 EEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLR 83
E + S ++ V+ DW + Y+ GT + N + + ++ +
Sbjct: 710 EIVLASQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLVKNLKRPRAIVIH 769
Query: 84 CAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
Q + WD PA + ++ G N + WP+ L ID+ +D LYW
Sbjct: 770 PNQGYIFFSEWDRPA--------NISRSHADGSNVVVFRNLTLGWPNGLAIDFTEDRLYW 821
Query: 144 CDSHLNTVESVRVDG 158
CD+ L+ V+ +DG
Sbjct: 822 CDALLDNVQHSNLDG 836
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ K M G + ++ K++ PS L IDY +LYW D+ +E ++G H
Sbjct: 2479 FGTSGKIFKTTMAGSLKRTIIDKDLSQPSGLAIDYEDRMLYWTDAVREKIERSDLEGKHR 2538
Query: 162 AVL 164
+L
Sbjct: 2539 EIL 2541
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
V+ D DK+ + N + + N + +Q Q + V + + + + ++
Sbjct: 1372 VNGYTLDADKHTCKAFNHSAAFLIISNRHTILVADLQDQALERVPINVENV--VATASNM 1429
Query: 97 PAPEIFPLDERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L++ G + +++ + L D+ LYW DS LNT+E
Sbjct: 1430 HTGTIFWSDMKLKRISRLDRGSDPQDIISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVA 1489
Query: 155 RVDGSHNAVLCHPN 168
+ G +L N
Sbjct: 1490 KETGVGRMILVKEN 1503
>gi|194753139|ref|XP_001958875.1| GF12345 [Drosophila ananassae]
gi|190620173|gb|EDV35697.1| GF12345 [Drosophila ananassae]
Length = 4651
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/228 (43%), Positives = 125/228 (54%), Gaps = 17/228 (7%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP W CD + DC D D T E +K +C GQ +C S+ CIP NWLCD E DC
Sbjct: 18 CIPMRWKCDSKADCP--DRSDETSE-CEKAPKCNEGQFRCKQSRHCIPENWLCDGEYDCG 74
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D D T+ + A C E+ C + + C+ LS+FCDG DC N E C+
Sbjct: 75 KGDTSDETNCP-----NGAAPKCRAFEIECRNGD-CLELSRFCDGHWDCDNDE---LLCD 125
Query: 378 NK-ADCENLKCSHKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTH 433
+ A C L CS+ C TP+GA C+CP GQ + N T+CVD DEC G CDQ C NT
Sbjct: 126 KQNAACAALNCSYNCKLTPQGARCYCPKGQVTESANSTRCVDYDECSEPGICDQMCRNTP 185
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SY CSC GY + G+SC A+NVP E AS+ T + RI +NG
Sbjct: 186 GSYECSCVSGYA-KSKGRSCRAINVPPTEAASLTLLHTGGVARIGING 232
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/342 (31%), Positives = 155/342 (45%), Gaps = 46/342 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----FCNAECTPGQFSCGMGKCIPE 220
C+ NE C S +C+ +S DG DC +D F ++C +F CG G+C
Sbjct: 976 CNSNEFTCALSGRCIQMSWVNDGVIDCGPDDDSDESAEIFFGSKCP--EFDCGNGRCRQF 1033
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG +C + +DE C +C G+ C C +CD +DC DN+
Sbjct: 1034 PDVCDGTDNC-GNNADE-TECEQECGIGEKYCR-PIGCYGEMHMCDGIIDCE-----DNS 1085
Query: 281 DE--------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DE W + +C + C +CIP CD C D TD
Sbjct: 1086 DEANCNQTKSDNHPLSGWKEVDECAQHEFACLDPFECIPDYLRCDGIPHC-----FDKTD 1140
Query: 327 E------DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
E + ++ + V+C HP+ L CG S QC+++++ CDGK DC + DEG C +K
Sbjct: 1141 ELNCTMINATRFDMNETVICEHPDRL-CGFSRQCISVNQLCDGKNDCEDTTDEGFLCADK 1199
Query: 380 ADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+ +CSH+C TP G +C CP PN +C C SC Q C + Y
Sbjct: 1200 LCERDHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDSCSQVCETSGKGYE 1259
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C EG+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1260 CRCLEGFDLAYDKFTCKS--TAPDEPY-VIFTNRQDIKGINL 1298
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/386 (30%), Positives = 159/386 (41%), Gaps = 85/386 (22%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ + C + RC + N C++ S CDG+ DC +G DE C EC QF+C G C
Sbjct: 2704 GNRTSGSCDIGQFRCATGN-CISGSWHCDGEKDCPDGSDELE-CRHECHGSQFACDNG-C 2760
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP S++CDG DC EDG+DE C + C QC S +CIP W+CD E DC D
Sbjct: 2761 IPASFQCDGKSDC-EDGTDEGPQCPSRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPGGD- 2818
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ D+ QC S CI ++CD + DC D
Sbjct: 2819 ----EGSEDEGPQCGTVAHIPDCPPPAHLCSSGLCIDSQYVCDGDEDCPGGD-------- 2866
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGP------- 374
D+Y V +P G S C+ ++ CDG+ DC +G DE
Sbjct: 2867 -DEY--EGCVPVYPPHACPGGSQMHQCQDGLCIFRNQTCDGRQDCRDGSDELASLCAHTR 2923
Query: 375 --------------------FCNNKADCENLK---------------CSHKCSPTPRGAM 399
C+ + DC + C H+C G
Sbjct: 2924 GCNGTDDFRCKNGACISVDLLCDRRDDCADYSDEELCNVNECLIRDICEHECEDKVVGYK 2983
Query: 400 CFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C C G + C D DEC C QTC NT+ SY C C +GYTL D +C A
Sbjct: 2984 CHCRPGYKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCGCAKGYTL-VDSHTCKAT 3042
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
+ E +IFS+ IR++++ G+
Sbjct: 3043 SNISME---LIFSNRYYIRQVNMVGN 3065
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
CG+S C+ S CDG PDC +G DE G + C GQF C G CI SW CDG
Sbjct: 2675 CGNSTICIMPSWRCDGDPDCPDGTDELNCGNRTSGSCDIGQFRCATGNCISGSWHCDGEK 2734
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KF 287
DC DGSDE C H+C Q C CIP ++ CD + DC D TDE
Sbjct: 2735 DC-PDGSDELE-CRHECHGSQFAC--DNGCIPASFQCDGKSDCE-----DGTDEGPQCPS 2785
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
C QC S +CIP W+CD E DC D + DE + C P C
Sbjct: 2786 RPCRPHLFQCKSSGRCIPQKWVCDGEKDCPGGD-EGSEDEGPQCGTVAHIPDCPPPAHLC 2844
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
SS C+ CDG DC G+DE C
Sbjct: 2845 -SSGLCIDSQYVCDGDEDCPGGDDEYEGC 2872
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 110/362 (30%), Positives = 152/362 (41%), Gaps = 77/362 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCIPES 221
C PN+ +C S +C+ ++ CD + DC NGEDE C A C P F C KCIP
Sbjct: 3520 CGPNDFQC-DSGRCIPMAWRCDDEADCPNGEDEPASCFTSKATCDPTYFKCNNTKCIPGR 3578
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDN 279
W+CD DC DGSDE N + C + +C + KCI HN CD E+ C S+D+I N
Sbjct: 3579 WRCDYENDC-GDGSDEMNCQMRNCSESEFRCG-TGKCIKHNHRCDGEIHCDDSSDEINCN 3636
Query: 280 TDEDWDKF-----HQCFNGQVQCAL-----------------------SKKCIPHNWLCD 311
++F + C N Q +C + KCI W CD
Sbjct: 3637 ITCKANQFKCAAFNTCINKQYECDGDDDCPDGSDEVNCTCPADHFSCGNGKCIMSRWKCD 3696
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
DD +D +DE + + V CH N +C + CV S CDG DC + ED
Sbjct: 3697 -----GWDDCLDGSDESLE---TCAHVHCHANAFKC-KNQLCVRNSALCDGVDDCGDNED 3747
Query: 372 EG-------PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECL--- 420
E P C +++ CEN C K F GQ C+D + +
Sbjct: 3748 ESEKVCAALPKCRHDQFQCENDDCISKI---------FRCDGQ----YNCIDGSDEMNCQ 3794
Query: 421 ----IDGSCDQTCTNTHLS-YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
GSC Q C + Y C C +GY P+ + + P ++ +S + R
Sbjct: 3795 PPVCGFGSCSQICIEKKMGHYNCKCADGYHKGPEKNATCLASGPDQ---ILLLASEQEFR 3851
Query: 476 RI 477
I
Sbjct: 3852 FI 3853
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 95/200 (47%), Gaps = 33/200 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C +E +CG+ N+C+ CDG DC + DE N C P F C G+CIP +W
Sbjct: 3479 LVCKRHEFQCGN-NRCMPFVWVCDGDIDCPDKSDEANCENLSCGPNDFQCDSGRCIPMAW 3537
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP + CF + C + KCIP W CD E DC
Sbjct: 3538 RCDDEADC-PNGEDEPAS----CFTSKATCDPTYFKCNNTKCIPGRWRCDYENDCG---- 3588
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFS 334
D +DE + C + +C + KCI HN CD E+ C S+D+I N
Sbjct: 3589 -DGSDEMNCQMRNCSESEFRCG-TGKCIKHNHRCDGEIHCDDSSDEINCN---------- 3636
Query: 335 HNAVLCHPNELRCGSSNQCV 354
+ C N+ +C + N C+
Sbjct: 3637 ---ITCKANQFKCAAFNTCI 3653
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 107/228 (46%), Gaps = 30/228 (13%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+++C+ CDG+ C +G DE +C +F CG G+CIP ++CD DC D
Sbjct: 2597 NHRCIPKENMCDGQHQCGDGSDEAAVL-CKCQREEFRCGSGECIPRKFRCDNMKDC-RDF 2654
Query: 235 SDEPNTCIHQCFNGQV---QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---DWDKFH 288
SDE + C G V C S CI +W CD + DC D TDE
Sbjct: 2655 SDEKDCPPMPCEAGDVTFEHCGNSTICIMPSWRCDGDPDCP-----DGTDELNCGNRTSG 2709
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C GQ +CA + CI +W CD E DC D +DE ++ CH ++ C
Sbjct: 2710 SCDIGQFRCA-TGNCISGSWHCDGEKDCP-----DGSDELECRH------ECHGSQFAC- 2756
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCSP 393
N C+ S CDGK DC +G DEGP C ++ +L K S +C P
Sbjct: 2757 -DNGCIPASFQCDGKSDCEDGTDEGPQCPSRPCRPHLFQCKSSGRCIP 2803
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 122/482 (25%), Positives = 177/482 (36%), Gaps = 157/482 (32%)
Query: 49 KRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ +L LA+++ +N C + +L + +L S +L P LD
Sbjct: 3115 QNVLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLD-GKYRRVLISENLREPRGIALDPYQ 3173
Query: 107 ------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3174 RHIFWSDWGDNPHIGKAGMDGSNPRMIIRDGLGWPNALTISFETQQLFWGDAREDTISVS 3233
Query: 142 ----------------------------------YWCDSHLNTVESVRVDGSHN-----A 162
YW D ++E + G N
Sbjct: 3234 DLEGKHTRLLLARSINPLLNLHHIFAIAVWEGRVYWSDWETKSIEYCSIYGDRNCTTLIT 3293
Query: 163 VLCHPNELRCG---------SSNQCVAL--SKFCDGKPDCSNGE----------DEGPFC 201
+ P +LR S N C+A S C P+ + D+G C
Sbjct: 3294 TIHRPMDLRIFHPYRQQQPLSGNPCLAANCSTLCVLSPEAPYYKCMCPTNFILADDGRTC 3353
Query: 202 NAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCI 259
A CT F C KCIP W+CD DC DGSDEP+TC C GQ QCA +KKCI
Sbjct: 3354 RANCTAAHFECKNTYKCIPFYWRCDTQDDC-GDGSDEPDTCPPFHCEPGQYQCA-NKKCI 3411
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSK----------------- 301
+ +CD C D +DE D DKF CF+ ++C +
Sbjct: 3412 HPSNICDGANHCG-----DGSDEIDCDKF-TCFDTHLKCGATSNSSAFCVDNGKRCDGVR 3465
Query: 302 --------------------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+C+P W+CD ++DC D +DE + S
Sbjct: 3466 DCPGGEDETGCLPLVCKRHEFQCGNNRCMPFVWVCDGDIDCP-----DKSDEANCENLS- 3519
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KC 391
C PN+ +C S +C+ ++ CD + DC NGEDE C +KA C+ KC++ KC
Sbjct: 3520 ----CGPNDFQC-DSGRCIPMAWRCDDEADCPNGEDEPASCFTSKATCDPTYFKCNNTKC 3574
Query: 392 SP 393
P
Sbjct: 3575 IP 3576
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 135/342 (39%), Gaps = 66/342 (19%)
Query: 71 FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQ 127
F+ V S+ ++ + L + DL +++ D RL E+A G +R L +
Sbjct: 2385 FLTGYGVESIIKTDIKMPNAL-TLDLEQQKLYWADARLDKIERANYDGSHRVVLAHSTPK 2443
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESV-------------RVDGSHNAVLCHPNELRCGS 174
++ + D+L+W D L+ V V V + + C
Sbjct: 2444 HAFAMAV--YGDLLFWTDWVLHAVVRANKFTGTDVLFLREHVTRPMGIVAVQNSSVNC-D 2500
Query: 175 SNQCVALSKFCD--------GKPDC--------SNGEDEGPFCNAECTPGQFSCGMGKCI 218
SNQC L+ C+ G+ C ++G N C Q++C G+CI
Sbjct: 2501 SNQCKILNGQCEDVCILNASGQATCHCTQGVLAADGRRCIAPVNTNCGKSQYNCHSGECI 2560
Query: 219 PESWKCDGFVDCLEDGSDE-PNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
P CD C DGSDE + CI +C C + +CIP +CD + C
Sbjct: 2561 PMELTCDNVTHC-ADGSDEWRSYCIFRECPETHFMCQ-NHRCIPKENMCDGQHQCG---- 2614
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD------EDWD 330
D +DE +C + +C S +CIP + CD DC D D D E D
Sbjct: 2615 -DGSDEA-AVLCKCQREEFRCG-SGECIPRKFRCDNMKDCR--DFSDEKDCPPMPCEAGD 2669
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F H CG+S C+ S CDG PDC +G DE
Sbjct: 2670 VTFEH-----------CGNSTICIMPSWRCDGDPDCPDGTDE 2700
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 101/214 (47%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C FSCG GKCI W
Sbjct: 3637 ITCKANQFKCAAFNTCINKQYECDGDDDCPDGSDE---VNCTCPADHFSCGNGKCIMSRW 3693
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC H C +C ++ C+ ++ LCD DC ++ D +
Sbjct: 3694 KCDGWDDCL-DGSDESLETCAHVHCHANAFKCK-NQLCVRNSALCDGVDDCGDNE--DES 3749
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
++ +C + Q QC + CI + CD + +C +D +DE + C
Sbjct: 3750 EKVCAALPKCRHDQFQCE-NDDCISKIFRCDGQYNC-----IDGSDE----------MNC 3793
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3794 QPPVCGFGSCSQICIEKKMGHYNCKCADGYHKGP 3827
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 116/299 (38%), Gaps = 56/299 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A + G ++ +I+ P++L +D Q LYW D+ L+ +E DGSH VL H
Sbjct: 2381 IQRAFLTGYGVESIIKTDIKMPNALTLDLEQQKLYWADARLDKIERANYDGSHRVVLAHS 2440
Query: 168 NELRCGSS--------------NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ + V +KF P +C
Sbjct: 2441 TPKHAFAMAVYGDLLFWTDWVLHAVVRANKFTGTDVLFLREHVTRPMGIVAVQNSSVNCD 2500
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI-PHNWLCDEE---- 268
+C + +C+ C+ + S + TC C G V A ++CI P N C +
Sbjct: 2501 SNQCKILNGQCEDV--CILNASGQA-TC--HCTQG-VLAADGRRCIAPVNTNCGKSQYNC 2554
Query: 269 -------MDCSTDDI---VDNTDEDWDK---FHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
M+ + D++ D +DE W F +C C + +CIP +CD +
Sbjct: 2555 HSGECIPMELTCDNVTHCADGSDE-WRSYCIFRECPETHFMCQ-NHRCIPKENMCDGQHQ 2612
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C D +DE AVL C E RCGS +C+ CD DC + DE
Sbjct: 2613 CG-----DGSDE--------AAVLCKCQREEFRCGSG-ECIPRKFRCDNMKDCRDFSDE 2657
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 55/107 (51%), Gaps = 8/107 (7%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGK-CIPESWKCDGFVDCLE-D 233
C+ + CD K DC + DE C +C GQF C + CIPE+W CDG DC + D
Sbjct: 18 CIPMRWKCDSKADCPDRSDETSECEKAPKCNEGQFRCKQSRHCIPENWLCDGEYDCGKGD 77
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
SDE PN +C +++C + C+ + CD DC D+++
Sbjct: 78 TSDETNCPNGAAPKCRAFEIECR-NGDCLELSRFCDGHWDCDNDELL 123
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 118/312 (37%), Gaps = 69/312 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH--NAVLC 165
+E + G R L N Q+ ++ +N ++YW D T+ + G++ N V
Sbjct: 760 IEHMKLDGTGREVLFKSN-QFRIFSMVQHN-GLIYWVDDRNATIWRFPLHGANINNTVSS 817
Query: 166 HPNELRCGSSNQC----VALSKFCDGKPDCSNGEDEGPFCNA------ECTPGQFSCGMG 215
+ R G + VA+ CS + G N C G G G
Sbjct: 818 TVHLQRSGRAANLRIFDVAIQPLAQAPSACSQSKCPGMCLNTPKGAICRCPDGFTLNGTG 877
Query: 216 K-CIPE------------------SWKC-------DGFVDCLEDGSDE---------PNT 240
CIP+ SW+C DGFVDC E+G DE PN
Sbjct: 878 SHCIPQLLQPRILPNCSSGFMCRSSWQCIESKDLCDGFVDC-ENGFDESSELNGPCNPNV 936
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C + + +C + LC CS D +D+ + C + + CALS
Sbjct: 937 C-----DKTHNFVCNGRCYQRSLLCSSITYCS-----DGSDQANCEQSTCNSNEFTCALS 986
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CI +W+ D +DC D D++DE + +F E CG+ +C C
Sbjct: 987 GRCIQMSWVNDGVIDCGPD---DDSDESAEIFFGSKC-----PEFDCGNG-RCRQFPDVC 1037
Query: 361 DGKPDCSNGEDE 372
DG +C N DE
Sbjct: 1038 DGTDNCGNNADE 1049
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M GE R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1428 RIERASMSGEGRRIISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1487
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1488 VLRNKEI 1494
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 3992 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4051
Query: 164 L 164
+
Sbjct: 4052 V 4052
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 108 LEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L ++ P SL +D LYWCD L T+E +++DG+ V
Sbjct: 713 IYSAWMDGTHKELLAKGTTALPMRAPRSLDVDSRSKRLYWCDVGLGTIEHMKLDGTGREV 772
Query: 164 LCHPNELRCGSSNQCVALSKFCDGK 188
L N+ R S Q L + D +
Sbjct: 773 LFKSNQFRIFSMVQHNGLIYWVDDR 797
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
L ++ G NR+ LVT+ I PSS+ +D +++YW D + + +E V +G + L
Sbjct: 381 LSRSLPDGTNRTVLVTEQIYHPSSITLDLANELVYWVDIYKDVIERVTYEGQNRWTL 437
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
+C GQ +C S+ CIP NWLCD E DC D D T+
Sbjct: 46 KCNEGQFRCKQSRHCIPENWLCDGEYDCGKGDTSDETN 83
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 116 ENRSPLVTKNI-QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
EN++ + +N+ + P L +D+ LYWCD L+T+E ++DG + VL N
Sbjct: 3107 ENKTQTLHQNVLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRRVLISEN 3160
>gi|340729715|ref|XP_003403142.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Bombus terrestris]
Length = 4608
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 126/378 (33%), Positives = 158/378 (41%), Gaps = 94/378 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S +CV +S CD + DC + DE N C+ QF+C +CIP +WKC
Sbjct: 1074 CAPNEFQC-KSGKCVPMSFRCDAENDCGDYSDEADCPNVTCSANQFACDNNRCIPNTWKC 1132
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD---------EEMDC--- 271
D DC D SDE C+ + C Q C S CIP +W+CD +EMDC
Sbjct: 1133 DSENDC-GDSSDEGEFCVAKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDEMDCPPV 1191
Query: 272 -----------------------STDDIVDNTDE---DWDKFHQC-FNGQVQCALSKKCI 304
D D +DE QC + Q QC S CI
Sbjct: 1192 TCLSTQFTCADQKMCVLDSYKCDGISDCNDGSDEVGCPSLAPDQCNTDKQFQCVSSAICI 1251
Query: 305 PHNWLCDEEMDC-----------------------------------STDDIVDNTDEDW 329
P +W CD DC DD D +DED
Sbjct: 1252 PRSWYCDGTADCPDVSDEPASCGQVGCQPGFFKCRNEKCVFKAYICDGKDDCGDGSDEDT 1311
Query: 330 DKYFSHNAVLCHPNELRCGS--------SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ + C E +C S +++CV +S CDGK DC NG DEGP C+ + +
Sbjct: 1312 ELH------ACTAPEFKCDSQQWKCPNVTDRCVNISSVCDGKFDCPNGADEGPACDFE-E 1364
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCS 439
C CS+ C TP G C CP GQ K C D +EC G C QTC N Y C
Sbjct: 1365 CRGAYCSYHCIQTPLGKQCTCPPGQELGKDGYDCQDVNECEPPGRCSQTCVNIKRGYYCG 1424
Query: 440 CTEGYTLRPDGKSCTAVN 457
C +GYTL D +C A N
Sbjct: 1425 CVDGYTLEKDKHTCKAFN 1442
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 177/377 (46%), Gaps = 54/377 (14%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG----SSNQCVALSKF 184
PS+LV +Y +D C+S + +S C ++ CG + C+ +
Sbjct: 74 PSTLVCNYQKD----CESAEDEFQSC------TPPDCEAGQITCGQYIFNKTYCIPPHQR 123
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---CIPESWKCDGFVDCLEDGSDEP--- 238
CD DC +G DE +C P F CG CIP+ KCDG++DC +G DE
Sbjct: 124 CDMTVDCVDGTDEAGCNYRKCQPDDFRCGGSTPELCIPKEKKCDGYLDC-RNGRDEEKCE 182
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
N C Q +C +++CI + C+ + DC DN+DE+ F C Q +CA
Sbjct: 183 NNAKPACRLDQFRCNSTQRCIEQSARCNYKDDCG-----DNSDEEGCNFQPCAINQFRCA 237
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC--GSSNQ---C 353
S CIP +++CD DC D +DE S C PN+ C GS + C
Sbjct: 238 NSL-CIPRSYVCDGYKDCH-----DGSDEK-----SCTTTACPPNKFVCPRGSPDGKPLC 286
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT 411
+ S+ CDGK DC + DE C++ C +L C +KC +P G +C+CP G + T
Sbjct: 287 IDRSQICDGKSDCEDKADEEATCSSVI-CTSLLCRYKCRASPTGGVCYCPPGWVLANDST 345
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP--------QDEP 463
C+D DEC G C+Q C NT SY CSC G+TL+ K C A P E
Sbjct: 346 TCIDRDECSEWGFCEQLCQNTEGSYTCSCAPGFTLQARNK-CRAQQHPGVKLELLVAQER 404
Query: 464 ASIIFSSTVDIRRIHLN 480
A SS+ + R I +N
Sbjct: 405 AVWRMSSSAEDRTIVVN 421
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 147/365 (40%), Gaps = 80/365 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2827 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQSSFRCPNHRCIPATW 2886
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +D
Sbjct: 2887 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDR 2940
Query: 280 TDEDWDKFHQC------FNGQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + C +K +CIP WLCD + DC VD DE+
Sbjct: 2941 SDED--ERHQCNERKCDEETEFTCTANKLWNRAQCIPKKWLCDGDPDC-----VDGADEN 2993
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C N+ C + +C+ + CD DC +G DEG FCN++
Sbjct: 2994 VTLHHCPTPTPCAENQFTC-DNGRCLNKNWLCDHDNDCGDGSDEGKFCNSRYKPCTSQEF 3052
Query: 382 -CENLKCSHK------------------CSPTPRGAMCFCPAGQNPNKTQCVDA------ 416
C N KC K C P + C P C+DA
Sbjct: 3053 TCHNFKCIRKQFHCDGQDDCGDHSDEDGCPPKTKSMTCPNPKDFMCANGNCIDAQLVCNK 3112
Query: 417 ----------------DECLI--DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
DEC + C C +T SY C C GY L DGK+C ++
Sbjct: 3113 EPDCADESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLEDGKACEDIDE 3172
Query: 459 PQDEP 463
+ P
Sbjct: 3173 CMETP 3177
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CVA + CDG+ DC + DE C P +F C GKC+P S++CD DC D
Sbjct: 1043 ANQRCVAHAWVCDGENDCLDNSDERNCTKPTCAPNEFQCKSGKCVPMSFRCDAENDC-GD 1101
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN 292
SDE + C Q C + +CIP+ W CD E DC D++DE ++ C
Sbjct: 1102 YSDEADCPNVTCSANQFACD-NNRCIPNTWKCDSENDCG-----DSSDEGEFCVAKTCSY 1155
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1156 FQFTCPRSGHCIPRSWVCDGDNDC-----FDQQDE-----MDCPPVTCLSTQFTCADQKM 1205
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1206 CVLDSYKCDGISDCNDGSDE 1225
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 113/245 (46%), Gaps = 23/245 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM 214
DG C + RCG ++ C+ CDG+ DC +G DE C A C P F C
Sbjct: 3527 DGKTCRANCTAGQHRCGPPDEKCIPWYWMCDGEKDCKDGSDEPTSCVARVCRPSVFQCAN 3586
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G C P CDG DC D SDE N C +C + +C + +CI +W CD + DC
Sbjct: 3587 GNCRPSVAVCDGADDC-GDKSDEAN-CNLECGELEFKCKSNGRCIHESWKCDGDADCK-- 3642
Query: 275 DIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED H C + +CI W+CD + DC D++DE
Sbjct: 3643 ---DGSDEDPAICHNRPCDPSTEFTCKNGRCIQKVWMCDSDNDCG-----DDSDEPAYMC 3694
Query: 333 FSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCS- 388
N C RC G +N +C+ FCDGK DC +G DE P K D E + KC+
Sbjct: 3695 RQKN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDELPENCPKCDPEMDFKCTN 3751
Query: 389 HKCSP 393
++C P
Sbjct: 3752 NRCVP 3756
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV+ I +P ++ + + ++W D L V N V
Sbjct: 2576 VREKIERSELDGNNRQILVSATI-YPFAITV--FGEYIFWTDLQLRGVYRAEKHTGANKV 2632
Query: 164 LC------HPNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
P +L S+ N C + CD G +C S +E
Sbjct: 2633 ELVKRLEDSPRDLHIYSAARQQCKVNPCNISNGGCDQSCHPGINGSAECKCDDNSRLVNE 2692
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C +F+C G+CI W CDG DC + ++ N C H C + +C
Sbjct: 2693 DRMCVPKNVTCDSSKFACRNGRCISRMWACDGDDDCGDGSDEDTNYCSYHSCSPNEFRCN 2752
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2753 -NGRCIFRTWKCDHENDCR-----DGSDEEGCVYPPCAPGEFTCA-NYRCIPQSQVCNGV 2805
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C PN L+C +N CV CDG DC + DE
Sbjct: 2806 NDCKDNVTSDETHERCPR-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2860
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2861 PLHCAQRTCPQSSFRCPNHRCIPA 2884
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPE 220
A +C P+ +C + N C CDG DC + DE CN EC +F C G+CI E
Sbjct: 3574 ARVCRPSVFQCANGN-CRPSVAVCDGADDCGDKSDEAN-CNLECGELEFKCKSNGRCIHE 3631
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC +DGSDE P C ++ C + +CI W+CD + DC D
Sbjct: 3632 SWKCDGDADC-KDGSDEDPAICHNRPCDPSTEFTCKNGRCIQKVWMCDSDNDCG-----D 3685
Query: 279 NTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3686 DSDEPAYMCRQKNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-----DGSDE-----LP 3735
Query: 335 HNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
N C P + +C ++N+CV CD DC +G DE
Sbjct: 3736 ENCPKCDPEMDFKC-TNNRCVPKQWLCDFADDCGDGSDEA 3774
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 142/357 (39%), Gaps = 68/357 (19%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEG-PFCN---AECTPGQFSCGMGKCIPESWKCDGFVD 229
++N+CV CD DC +G DE C EC+ +F C GKCI W+CD D
Sbjct: 3750 TNNRCVPKQWLCDFADDCGDGSDEAEAMCKDRYRECSESEFKCDNGKCIASRWRCDSEDD 3809
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------ 271
C D SDE C QCA S CI CD DC
Sbjct: 3810 C-GDNSDENGCQEFVCKGDTFQCA-SGHCIASYLRCDGTRDCRDMSDEIGCPPKYPGGRY 3867
Query: 272 ---------------------STDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHN 307
+DD D +DE+ F + QCA + KCI
Sbjct: 3868 CPQTRFQCDNNLCVYLTDICDGSDDCGDGSDENASMCANFKCDTTRRFQCA-NHKCITKY 3926
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
LCD D+ D +DE+ + C ++ +C+ SK CD DC
Sbjct: 3927 QLCD-----GIDNCGDGSDENNMTMCASRIRPCDAITEYTCANKKCIDRSKLCDFADDCG 3981
Query: 368 NGEDEGPFCNNKADCENLK--CSHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADECLI 421
+ DE +NK E+ K CSH C + T G +C C G ++ C D DEC
Sbjct: 3982 DSSDELGCHHNKPCLESNKGGCSHYCHNITDAGYICACYLGYIIAQDDRKHCEDIDECAT 4041
Query: 422 -DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS--CTAVNVPQDEPASIIFSSTVDIR 475
C Q CTN + +Y CSC +G+ L D +S C A+ D I+F++ IR
Sbjct: 4042 GQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCKAL----DTDMMILFANGPGIR 4093
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 117/291 (40%), Gaps = 79/291 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C PG+F+C +CIP+S C
Sbjct: 2744 CSPNEFRC-NNGRCIFRTWKCDHENDCRDGSDEEGCVYPPCAPGEFTCANYRCIPQSQVC 2802
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2803 NGVNDCKDNVTSDETHERCPRNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2857
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2858 DENPLHCAQRTCPQSSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2917
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED------WDKYFSHNAVLCHPNELRCGS 349
C + CIP ++CD + DC +D +DED K C N+L +
Sbjct: 2918 TCD-NGNCIPRIYICDGDNDC-----LDRSDEDERHQCNERKCDEETEFTCTANKL--WN 2969
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG----------PFCNNKADCENLKCSHK 390
QC+ CDG PDC +G DE P N+ C+N +C +K
Sbjct: 2970 RAQCIPKKWLCDGDPDCVDGADENVTLHHCPTPTPCAENQFTCDNGRCLNK 3020
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 17/163 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +C+ +W CDG DCL D SDE N C + QC S KC+P ++ CD E
Sbjct: 1040 FTCANQRCVAHAWVCDGENDCL-DNSDERNCTKPTCAPNEFQCK-SGKCVPMSFRCDAEN 1097
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC D +DE C Q C + +CIP+ W CD E DC D++DE
Sbjct: 1098 DCG-----DYSDEADCPNVTCSANQFACD-NNRCIPNTWKCDSENDCG-----DSSDE-- 1144
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F A C + C S C+ S CDG DC + +DE
Sbjct: 1145 -GEFCV-AKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDE 1185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV I P +L IDY+ Q +LYW DS LNT+ES+ DGS+ V+
Sbjct: 4234 KIEIAWMDGDRRKQLVYDRIGQPIALTIDYSMQHVLYWADSKLNTIESIEQDGSNRKVIL 4293
Query: 166 HPNELR 171
+ LR
Sbjct: 4294 KGDSLR 4299
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS ++ I WP+ L +D +Y+ DS + +++ DG+
Sbjct: 1585 RIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFDFIDTCLYDGTKRIQVLA 1644
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1645 GSHYLLHPHSL 1655
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD + DK+ + N + + N + +Q+Q + V + + + + ++
Sbjct: 1426 VDGYTLEKDKHTCKAFNRSAAFLIISNRHTILVADLQEQALERVPINVENV--VATASNM 1483
Query: 97 PAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L+K N P+ ++ + L D+ LYW DS LNT+E V
Sbjct: 1484 HTGTIFWSDMKLKKISRLDRNSDPVDVISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVV 1543
Query: 155 RVDGSHNAVLCHPN 168
+ G++ +L N
Sbjct: 1544 KETGTNRMILVKEN 1557
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 32 STDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN 88
S ++ V+ DW + Y+ GT + N + + ++ + Q
Sbjct: 778 SQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLKNLKRPRAIVIHPNQGY 837
Query: 89 DLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+ WD PA + +A G N + WP+ L ID+ +D LYWCD+ L
Sbjct: 838 IFFSEWDRPA--------NISRAYTDGSNLVVFKNLTLGWPNGLAIDFAKDRLYWCDALL 889
Query: 149 NTVESVRVDGS 159
+ V+ ++G+
Sbjct: 890 DHVQHSNLNGT 900
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 43 DW--DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE 100
DW K + + H E N N+ + ++ + SW L A
Sbjct: 3296 DWVGKKLYWLDRHAKHLDVAELNGTNRKTLLTGIADPRAIVVHPGTGYLYFTSWHLQA-- 3353
Query: 101 IFPLDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+ K GM G N + ++T +I WP++L IDY D +++ D+HL+ + ++G
Sbjct: 3354 ------YIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDYIAFADLEG 3407
Query: 159 SHN 161
HN
Sbjct: 3408 -HN 3409
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL KA + G N +P+VT I P + ID + +YW DS +T++ V G ++
Sbjct: 2222 RLGKAYLDGSNWTPIVTSGISTPRDITIDPDTHDVYWVDSKQDTIQKVSYTGGSRQII 2279
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 110/289 (38%), Gaps = 57/289 (19%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ C Q C S CIP +W+CD + DC +D+ + L+
Sbjct: 1149 VAKTCSYFQFTCPRSGHCIPRSWVCDGDNDC------------FDQQDEMDCPPVTCLST 1196
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRS 119
+F +Q +C + +C I+D + D + P + P +K +
Sbjct: 1197 QFTCADQKMCVLDS-------YKCDGISDCNDGSDEVGCPSLAPDQCNTDK-------QF 1242
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
V+ I P S ++CD + + S V C P +C + +CV
Sbjct: 1243 QCVSSAICIPRS----------WYCDGTADCPDVSDEPASCGQVGCQPGFFKC-RNEKCV 1291
Query: 180 ALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG---------MGKCIPESWKCDGFVDC 230
+ CDGK DC +G DE +A CT +F C +C+ S CDG DC
Sbjct: 1292 FKAYICDGKDDCGDGSDEDTELHA-CTAPEFKCDSQQWKCPNVTDRCVNISSVCDGKFDC 1350
Query: 231 LEDGSDEPNTC-IHQCFNGQ-----VQCALSKKCI--PHNWLCDEEMDC 271
+G+DE C +C +Q L K+C P L + DC
Sbjct: 1351 -PNGADEGPACDFEECRGAYCSYHCIQTPLGKQCTCPPGQELGKDGYDC 1398
>gi|350411403|ref|XP_003489337.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Bombus impatiens]
Length = 4608
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 155/383 (40%), Gaps = 104/383 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S +CV +S CD + DC + DE N C+ QF+C +CIP +WKC
Sbjct: 1074 CAPNEFQC-KSGKCVPMSFRCDAENDCGDYSDEADCPNVTCSANQFACDNNRCIPNTWKC 1132
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
D DC D SDE C+ + C Q C S CIP +W+CD + DC D DE
Sbjct: 1133 DSENDC-GDSSDEGEFCVAKTCSYSQFTCPRSGHCIPRSWVCDGDNDC-----FDQQDEV 1186
Query: 283 -------------------------DWDKFHQCFNG------------------QVQCAL 299
D C +G Q QC
Sbjct: 1187 DCPPVTCLSTQFTCADQKMCVLDSYKCDGISDCNDGSDEVGCPSLAPDQCNTDKQFQCVS 1246
Query: 300 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 324
S CIP +W CD DC DD D
Sbjct: 1247 SAICIPRSWYCDGTADCPDGSDEPASCGQVGCQPGFFKCRNEKCVFKAYICDGKDDCGDG 1306
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGS--------SNQCVALSKFCDGKPDCSNGEDEGPFC 376
+DED + + C E +C S +++CV +S CDGK DC NG DEGP C
Sbjct: 1307 SDEDTELH------ACTAPEFKCDSQQWKCPNVTDRCVNISSVCDGKFDCPNGADEGPAC 1360
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHL 434
+ + +C CS+ C TP G C CP GQ K C D +EC G C QTC N
Sbjct: 1361 DFE-ECRGAYCSYHCIQTPLGKQCTCPPGQELGKDGYDCQDVNECEPPGRCSQTCVNIKR 1419
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C +GYTL D +C A N
Sbjct: 1420 GYYCGCVDGYTLEKDKHTCKAFN 1442
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/377 (33%), Positives = 177/377 (46%), Gaps = 54/377 (14%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG----SSNQCVALSKF 184
PS+LV +Y +D C+S + +S C ++ CG + C+ +
Sbjct: 74 PSTLVCNYQKD----CESAEDEFQSC------TPPDCEAGQITCGQYIFNKTYCIPPHQR 123
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---CIPESWKCDGFVDCLEDGSDEP--- 238
CD DC +G DE +C P F CG CIP+ KCDG++DC +G DE
Sbjct: 124 CDMTVDCVDGTDEAGCNYRKCQPDDFRCGGSTPELCIPKEKKCDGYLDC-RNGRDEEKCE 182
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
N C Q +C +++CI + C+ + DC DN+DE+ F C Q +CA
Sbjct: 183 NNAKPACRLDQFRCNSTQRCIEQSARCNYKDDCG-----DNSDEEGCNFQPCAINQFRCA 237
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC--GSSNQ---C 353
S CIP +++CD DC D +DE S C PN+ C GS + C
Sbjct: 238 NSL-CIPRSYVCDGYKDCH-----DGSDEK-----SCTTTACPPNKFVCPRGSPDGKPLC 286
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT 411
+ S+ CDGK DC + DE C++ C +L C +KC +P G +C+CP G + T
Sbjct: 287 IDRSQICDGKSDCEDKADEEATCSSVI-CTSLLCRYKCRASPTGGVCYCPPGWVLANDST 345
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP--------QDEP 463
C+D DEC G C+Q C NT SY CSC G+TL+ K C A P E
Sbjct: 346 TCIDRDECSEWGFCEQLCQNTEGSYTCSCAPGFTLQARNK-CRAQQHPGVKLELLVAQER 404
Query: 464 ASIIFSSTVDIRRIHLN 480
A SS+ + R I +N
Sbjct: 405 AVWRMSSSAEDRTIVVN 421
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 149/365 (40%), Gaps = 80/365 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2827 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQSSFRCPNHRCIPATW 2886
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +D
Sbjct: 2887 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDR 2940
Query: 280 TDEDWDKFHQC------FNGQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + C +K +CIP WLCD + DC VD DE+
Sbjct: 2941 SDED--ERHQCNERKCDEETEFTCTANKLWNRAQCIPKKWLCDGDPDC-----VDGADEN 2993
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C N+ C + +C+ + CD DC +G DEG FCN++
Sbjct: 2994 VTLHHCPTPTPCADNQFTC-DNGRCLNRNWLCDHDNDCGDGSDEGKFCNSRYKPCTSQEF 3052
Query: 382 -CENLKCSHK------------------CSPTPRGAMCFCPAGQNPNKTQCVD------- 415
C N KC K C P + +C P C+D
Sbjct: 3053 TCHNFKCIRKQFHCDGQDDCGDHSDEDGCPPKVKNTVCPNPKDFMCANGNCIDMQLVCNK 3112
Query: 416 ----ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
ADE C ID C C +T SY C C GY L DGK+C ++
Sbjct: 3113 EPDCADESDEPAHCNIDECAVVEMNQCAHKCIDTPTSYYCECNPGYRLLEDGKACEDIDE 3172
Query: 459 PQDEP 463
+ P
Sbjct: 3173 CMETP 3177
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CVA + CDG+ DC + DE C P +F C GKC+P S++CD DC D
Sbjct: 1043 ANQRCVAHAWVCDGENDCLDNSDERNCTKPTCAPNEFQCKSGKCVPMSFRCDAENDC-GD 1101
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN 292
SDE + C Q C + +CIP+ W CD E DC D++DE ++ C
Sbjct: 1102 YSDEADCPNVTCSANQFACD-NNRCIPNTWKCDSENDCG-----DSSDEGEFCVAKTCSY 1155
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1156 SQFTCPRSGHCIPRSWVCDGDNDC-----FDQQDE-----VDCPPVTCLSTQFTCADQKM 1205
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1206 CVLDSYKCDGISDCNDGSDE 1225
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV+ I +P ++ + + ++W D L V N V
Sbjct: 2576 VREKIERSELDGNNRQILVSATI-YPFAITV--FGEYIFWTDLQLRGVYRAEKHTGANKV 2632
Query: 164 LC------HPNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
P +L S+ N C + CD G +C S +E
Sbjct: 2633 ELVKRLEDSPRDLHIYSAARQQCKVNPCNISNGGCDQSCHPGINGSAECKCDDNSRLVNE 2692
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C +F+C G+CI W CDG DC + ++ N C H C + +C
Sbjct: 2693 DRMCVPKNVTCDSSKFACRNGRCISRMWACDGDDDCGDGSDEDTNYCSYHSCSPNEFRCN 2752
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2753 -NGRCIFRTWKCDHENDCR-----DGSDEEGCVYPPCAPGEFTCA-NYRCIPQSQVCNGV 2805
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C PN L+C +N CV CDG DC + DE
Sbjct: 2806 NDCKDNVTSDETHERCPR-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2860
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2861 PLHCAQRTCPQSSFRCPNHRCIPA 2884
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPE 220
A +C P+ +C + N C CDG DC + DE CN EC +F C G+CI E
Sbjct: 3574 ARVCRPSVFQCANGN-CRPSVAVCDGADDCGDKSDEAN-CNLECGELEFKCKSNGRCIHE 3631
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC +DGSDE P C ++ C + +CI W+CD + DC D
Sbjct: 3632 SWKCDGDADC-KDGSDEDPAICHNRPCDPSTEFTCKNGRCIQKVWMCDSDNDCG-----D 3685
Query: 279 NTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3686 DSDEPAYMCRQKNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-----DGSDE-----LP 3735
Query: 335 HNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
N C P + +C ++N+CV CD DC +G DE
Sbjct: 3736 ENCPKCDPEMDFKC-TNNRCVPKQWLCDFADDCGDGSDEA 3774
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 142/357 (39%), Gaps = 68/357 (19%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEG-PFCN---AECTPGQFSCGMGKCIPESWKCDGFVD 229
++N+CV CD DC +G DE C EC+ +F C GKCI W+CD D
Sbjct: 3750 TNNRCVPKQWLCDFADDCGDGSDEAEAMCKDRYRECSESEFKCDNGKCIASRWRCDSEDD 3809
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------ 271
C D SDE C QCA S CI CD DC
Sbjct: 3810 C-GDNSDENGCQEFVCKGDTFQCA-SGHCIASYLRCDGTRDCRDMSDEIGCPPKYPGGRY 3867
Query: 272 ---------------------STDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHN 307
+DD D +DE+ F + QCA + KCI
Sbjct: 3868 CPQTRFQCDNNLCVYLTDICDGSDDCGDGSDENASMCANFKCDTTRRFQCA-NHKCITKY 3926
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
LCD D+ D +DE+ + C ++ +C+ SK CD DC
Sbjct: 3927 QLCD-----GIDNCGDGSDENNMTMCASRVRPCDAITEYTCANKKCIDRSKLCDFADDCG 3981
Query: 368 NGEDEGPFCNNKADCENLK--CSHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADECLI 421
+ DE +NK E+ K CSH C + T G +C C G ++ C D DEC
Sbjct: 3982 DSSDELGCHHNKPCLESNKGGCSHYCHNITDAGYICACYPGYIIAQDDRKHCEDIDECAT 4041
Query: 422 -DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS--CTAVNVPQDEPASIIFSSTVDIR 475
C Q CTN + +Y CSC +G+ L D +S C A+ D I+F++ IR
Sbjct: 4042 GQHQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCKAL----DTDMMILFANGPGIR 4093
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 151/383 (39%), Gaps = 104/383 (27%)
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-R 155
IF D L+ A + G NR +++ + P I D ++W D +L + +
Sbjct: 3389 RIFYADAHLDYIAFADLEGHNRRKVLSGSAV-PHVFAITVFDDFIFWTDWNLKAISRADK 3447
Query: 156 VDGSHNAVL------------CHP----------NELRCGSSNQCV----ALSKFCDG-- 187
G++ VL HP +E G S+ C+ A S +G
Sbjct: 3448 FSGANLRVLRNTTHRPYDIHAYHPLRQLPYNNPCSENNGGCSHLCLISPPASSYLLEGYG 3507
Query: 188 -------KPDCSNG---EDEGPFCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGS 235
K +C N +G C A CT GQ CG KCIP W CDG DC +DGS
Sbjct: 3508 QPGVTSYKCNCPNQFILNKDGKTCRANCTAGQHRCGPPDEKCIPWYWMCDGEKDC-KDGS 3566
Query: 236 DEPNTC--------IHQCFNG-------------------------------QVQCALSK 256
DEP +C + QC NG + +C +
Sbjct: 3567 DEPTSCVARVCRPSVFQCANGNCRPSVAVCDGADDCGDKSDEANCNLECGELEFKCKSNG 3626
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEM 314
+CI +W CD + DC D +DED H C + +CI W+CD +
Sbjct: 3627 RCIHESWKCDGDADCK-----DGSDEDPAICHNRPCDPSTEFTCKNGRCIQKVWMCDSDN 3681
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDE 372
DC D++DE N C RC G +N +C+ FCDGK DC +G DE
Sbjct: 3682 DCG-----DDSDEPAYMCRQKN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDE 3733
Query: 373 GPFCNNKADCE-NLKCS-HKCSP 393
P K D E + KC+ ++C P
Sbjct: 3734 LPENCPKCDPEMDFKCTNNRCVP 3756
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 118/291 (40%), Gaps = 79/291 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C PG+F+C +CIP+S C
Sbjct: 2744 CSPNEFRC-NNGRCIFRTWKCDHENDCRDGSDEEGCVYPPCAPGEFTCANYRCIPQSQVC 2802
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2803 NGVNDCKDNVTSDETHERCPRNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2857
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2858 DENPLHCAQRTCPQSSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2917
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED------WDKYFSHNAVLCHPNELRCGS 349
C + CIP ++CD + DC +D +DED K C N+L +
Sbjct: 2918 TCD-NGNCIPRIYICDGDNDC-----LDRSDEDERHQCNERKCDEETEFTCTANKL--WN 2969
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG----------PFCNNKADCENLKCSHK 390
QC+ CDG PDC +G DE P +N+ C+N +C ++
Sbjct: 2970 RAQCIPKKWLCDGDPDCVDGADENVTLHHCPTPTPCADNQFTCDNGRCLNR 3020
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +C+ +W CDG DCL D SDE N C + QC S KC+P ++ CD E
Sbjct: 1040 FTCANQRCVAHAWVCDGENDCL-DNSDERNCTKPTCAPNEFQCK-SGKCVPMSFRCDAEN 1097
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC D +DE C Q C + +CIP+ W CD E DC D++DE
Sbjct: 1098 DCG-----DYSDEADCPNVTCSANQFACD-NNRCIPNTWKCDSENDCG-----DSSDE-- 1144
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F A C ++ C S C+ S CDG DC + +DE
Sbjct: 1145 -GEFCV-AKTCSYSQFTCPRSGHCIPRSWVCDGDNDCFDQQDE 1185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV I P +L IDY+ Q +LYW DS LNT+ES+ DGS+ V+
Sbjct: 4234 KIEIAWMDGDRRKQLVYDRIGQPIALTIDYSMQHVLYWADSKLNTIESIEQDGSNRKVIL 4293
Query: 166 HPNELR 171
+ LR
Sbjct: 4294 KGDSLR 4299
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS ++ I WP+ L +D +Y+ DS + +++ DG+
Sbjct: 1585 RIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKFDFIDTCLYDGTKRIQVLA 1644
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1645 GSHYLLHPHSL 1655
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD + DK+ + N + + N + +Q+Q + V + + + + ++
Sbjct: 1426 VDGYTLEKDKHTCKAFNRSAAFLIISNRHTILVADLQEQALERVPINVENV--VATASNM 1483
Query: 97 PAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L+K N P+ ++ + L D+ LYW DS LNT+E V
Sbjct: 1484 HTGTIFWSDMKLKKISRLDRNSDPVDVISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVV 1543
Query: 155 RVDGSHNAVLCHPN 168
+ G++ +L N
Sbjct: 1544 KETGTNRMILVKEN 1557
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 11/131 (8%)
Query: 32 STDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN 88
S ++ V+ DW + Y+ GT + N + + ++ + Q
Sbjct: 778 SQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSTRNVTYRRTLLKNLKRPRAIVIHPNQGY 837
Query: 89 DLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+ WD PA + +A G N + WP+ L ID+ +D LYWCD+ L
Sbjct: 838 IFFSEWDRPA--------NISRAYTDGSNLVVFKNLTLGWPNGLAIDFAKDRLYWCDALL 889
Query: 149 NTVESVRVDGS 159
+ V+ ++G+
Sbjct: 890 DHVQHSNLNGT 900
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 110/289 (38%), Gaps = 57/289 (19%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ C Q C S CIP +W+CD + DC +D+ + L+
Sbjct: 1149 VAKTCSYSQFTCPRSGHCIPRSWVCDGDNDC------------FDQQDEVDCPPVTCLST 1196
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRS 119
+F +Q +C + +C I+D + D + P + P +K +
Sbjct: 1197 QFTCADQKMCVLDS-------YKCDGISDCNDGSDEVGCPSLAPDQCNTDK-------QF 1242
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
V+ I P S ++CD + + S V C P +C + +CV
Sbjct: 1243 QCVSSAICIPRS----------WYCDGTADCPDGSDEPASCGQVGCQPGFFKC-RNEKCV 1291
Query: 180 ALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG---------MGKCIPESWKCDGFVDC 230
+ CDGK DC +G DE +A CT +F C +C+ S CDG DC
Sbjct: 1292 FKAYICDGKDDCGDGSDEDTELHA-CTAPEFKCDSQQWKCPNVTDRCVNISSVCDGKFDC 1350
Query: 231 LEDGSDEPNTC-IHQCFNGQ-----VQCALSKKCI--PHNWLCDEEMDC 271
+G+DE C +C +Q L K+C P L + DC
Sbjct: 1351 -PNGADEGPACDFEECRGAYCSYHCIQTPLGKQCTCPPGQELGKDGYDC 1398
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 13/123 (10%)
Query: 43 DW--DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE 100
DW K + + H E N N+ + ++ + SW L A
Sbjct: 3296 DWVGKKLYWLDRHAKHLDVAELNGTNRKTLLTGIADPRAIVVHPGTGYLYFTSWHLQA-- 3353
Query: 101 IFPLDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+ K GM G N + ++T +I WP++L IDY D +++ D+HL+ + ++G
Sbjct: 3354 ------YIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFYADAHLDYIAFADLEG 3407
Query: 159 SHN 161
HN
Sbjct: 3408 -HN 3409
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL KA + G N +P+VT I P + ID + +YW DS +T++ V G ++
Sbjct: 2222 RLGKAYLDGSNWTPIVTSGISTPRDITIDPDTHDVYWVDSKQDTIQKVSYTGGSRQII 2279
>gi|157116559|ref|XP_001658550.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108876398|gb|EAT40623.1| AAEL007657-PA [Aedes aegypti]
Length = 1847
Score = 154 bits (390), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 180/394 (45%), Gaps = 69/394 (17%)
Query: 144 CDSHLN---TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--- 197
CD H++ + ++ +G CH ++ C C+ ++ CDG PDC +G DE
Sbjct: 1018 CDEHVDCGDGSDEMKCEGYDRGTGCHEHQHAC-PDGMCIDVNTLCDGFPDCLDGSDEVGC 1076
Query: 198 ----GPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQV 250
NA C P F C MG+CIP+ W+CDG DC DGSDE + C+ + C G
Sbjct: 1077 TDLTNEKSNATTCGPLMFRCNMGQCIPKWWECDGNPDC-TDGSDEHDKCLTKTDCAAGFT 1135
Query: 251 QCALSKKCIPHNWLCDEEMDCS--TDDI---------VDNTDEDWDKF-----HQCFNGQ 294
+CAL CI LCD DC +D++ V D++ K+ +C +
Sbjct: 1136 KCALGH-CIEDRLLCDGNNDCGDNSDELNCKVELEPCVGLEDDNPTKYLCPRSGKCLDIA 1194
Query: 295 VQCA------------------------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
V+C S KCI W CD+E+DC DD D D
Sbjct: 1195 VRCNGTAECPDGEDEAGCSNCGLQEFQCKSGKCIRKEWRCDKEVDC--DDGSDEVDCVNG 1252
Query: 331 KYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
H V C C C+ +S+ C+GK DC +G+DEG C++ C C
Sbjct: 1253 TAAEHMEVHVACGGGTFEC-KPGVCIEMSQVCNGKKDCDDGKDEGKGCDDA--CAKSPCE 1309
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
HKC TP GA+C C G PNK C+D DEC C Q C NT SY CSC G+ L
Sbjct: 1310 HKCIKTPTGAICECREGFTLAPNKKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFML 1369
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
R D SC AV + ++++S IR++ +N
Sbjct: 1370 RSDKISCKAVGPSR----YVLYTSYNQIRKLEVN 1399
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 161/354 (45%), Gaps = 48/354 (13%)
Query: 148 LNTVESVRVDGSHN---AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
+V++ R S A C NE RC + C+ C+G DC++G DE
Sbjct: 25 FGSVDAARKSSSSRIAKAPACAENEYRC-DNGACIPDVNHCNGVKDCTDGSDEVGCDYFL 83
Query: 205 C-TPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSK 256
C P + C K CI ++ CD DC G DE N + + V C+ K
Sbjct: 84 CKKPMWYRCKHDKSCISATFLCDKHDDC-PLGDDEENCENFEVPHVPVPCSKFEFTCTDK 142
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA----LSKKCI-PHNWLCD 311
CIP + +CD C +D +DE C + + +C +K+CI H+W+CD
Sbjct: 143 MCIPLDLVCDGVSHC-----LDGSDETIG----CKDIENKCKGFVCKNKRCINSHDWVCD 193
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSN 368
DD D +DE+ N + + C ++ CV L CDGK DC +
Sbjct: 194 -----GIDDCGDGSDEE-------NCFIGCDLEHGKFECADNSTCVDLKLVCDGKDDCGD 241
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCD 426
DEG CN+K +C++++C C TP GA+C C G NK C D +EC G C
Sbjct: 242 HSDEGGSCNSK-ECDSMRCPEGCKATPHGAVCLCKPGFRFNKKSKVCEDINECERYGLCS 300
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C NT S+ C+C + L+ D ++C + EP +++++ I +HLN
Sbjct: 301 QGCENTPGSFKCTCVNKFKLKDDSRTCELDD--STEPL-LLYTTQKSIGGLHLN 351
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 90/223 (40%), Gaps = 58/223 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--------GKCIPE 220
E +C +S +C+ +SK C+G DC++G DE C+ P Q C KCI +
Sbjct: 957 EFKC-TSGECLTISKRCNGNKDCADGSDEKG-CDEAGQPKQLHCQYDEFMCADKSKCIDQ 1014
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ +CD VDC DGSD EM C
Sbjct: 1015 TRRCDEHVDC-GDGSD-------------------------------EMKC--------- 1033
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDKYFSHNAVL 339
E +D+ C Q C CI N LCD DC D V TD +K NA
Sbjct: 1034 -EGYDRGTGCHEHQHACP-DGMCIDVNTLCDGFPDCLDGSDEVGCTDLTNEK---SNATT 1088
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
C P RC + QC+ CDG PDC++G DE C K DC
Sbjct: 1089 CGPLMFRC-NMGQCIPKWWECDGNPDCTDGSDEHDKCLTKTDC 1130
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA----- 162
+ AGM G+N+ L+ ++I WP+ L +D+ LYW D+ L +ES+RVDG++
Sbjct: 474 IGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIRVDGTNRVTVLAD 533
Query: 163 VLCHP 167
VL HP
Sbjct: 534 VLKHP 538
>gi|402888559|ref|XP_003907625.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Papio anubis]
Length = 4620
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 159/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 111 CSSHQITC-SNGQCIPGEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 167
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIPH ++CD + DC D +DE
Sbjct: 168 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPHAYVCDHDSDCQ-----DGSDEHA 219
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + SH C P E
Sbjct: 220 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSSHGVHKCSPRE 273
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 274 WSCPESGRCISIYKVCDGILDCPGREDENSTTTGKYCSTTL-CSALNCQYQCHETPYGGA 332
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 333 CFCPPGYTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILE-RGQHCKAN 391
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 392 DSFGE--ASIIFSNGRDLLIGDIHG 414
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESW 222
+C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI +
Sbjct: 1126 ICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCISVTN 1183
Query: 223 KCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+CDG DC D SDE P C + + QC CIP+ W CD DC +
Sbjct: 1184 RCDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYG 1237
Query: 280 TDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+DE + C NG CI WLCD + DC D +DE K
Sbjct: 1238 SDEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---K 1281
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHK 390
C + +C N CV +S CDG DC NG DE P CN N N C+H+
Sbjct: 1282 DCPTQPFRCPSWQWQCLGYNICVNMSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHE 1341
Query: 391 CSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1342 CVQEPFGAKCLCPLGFLLANDSKT-CEDVDECDIPGSCSQHCYNMRGSFRCSCDTGYMLE 1400
Query: 448 PDGKSCTAV 456
DG++C
Sbjct: 1401 SDGRTCKVT 1409
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2800 CQSGYTKCQNSNICIPRIYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2859
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD +DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2860 YCDQEIDC-SDASDEPASCGHPERTCLADEFKCDRG-RCIPSEWICDGDNDCG-----DM 2912
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2913 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2965
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2966 CTRRTCSENEFTCGYGLCIPEIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3025
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3026 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3085
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC C Q C
Sbjct: 3086 GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTETPFVCSQKC 3145
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3146 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3194
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 143/365 (39%), Gaps = 62/365 (16%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3684 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3742
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + DC D SDE + + C QC S C+P CD DC +D +DE
Sbjct: 3743 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVPSELKCDGTADC-----LDASDEA 3795
Query: 284 ----------------------------W-------------DKFHQCFNGQVQCALSKK 302
W ++ H C N +
Sbjct: 3796 DCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLNVPCNSPNRFR 3855
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C + + E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3856 CDNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPNDNVCDD 3914
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDAD 417
DC + DE G + C C C+ G +C C AG N +T C+D +
Sbjct: 3915 ADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDIN 3974
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIR 475
EC G+C Q C NT SY C C +G+T D GK C A + ++ V IR
Sbjct: 3975 ECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAA----EGSSPLLLLPDNVRIR 4030
Query: 476 RIHLN 480
+ +L+
Sbjct: 4031 KYNLS 4035
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1015 RCVPSYYRCDGVNDCHDNSDEQLCGTLNNTCSSSAFTCGNGECIPAHWRCDKRNDCV-DG 1073
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1074 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTEIC 1127
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1128 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1174
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++ CDG DCS+ DE
Sbjct: 1175 GDKCISVTNRCDGVFDCSDNSDEA 1198
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 116/274 (42%), Gaps = 66/274 (24%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCI 218
N C + C S+ +C++ CD DC +G DE A C+P F+C G+C+
Sbjct: 2674 NGERCAASSFTC-SNGRCISKEWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCANGRCV 2732
Query: 219 PESWKCDGFVDCLEDGSDEP-----------------NTCI------------------- 242
S++CD + DC DGSDE CI
Sbjct: 2733 QYSYRCDYYNDC-GDGSDEAGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNTSD 2791
Query: 243 ------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQ 294
C +G +C S CIP +LCD + DC DN+DE+ + H C + +
Sbjct: 2792 EKNCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDCG-----DNSDENPTYCTTHTCSSSE 2846
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QC S +CIP +W CD+E+DCS D +DE H C +E +C +C+
Sbjct: 2847 FQCT-SGRCIPQHWYCDQEIDCS-----DASDE--PASCGHPERTCLADEFKC-DRGRCI 2897
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + C+N CS
Sbjct: 2898 PSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2927
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3559 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3617
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3618 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAACNGVDDCRDNSDE 3676
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3677 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3730
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3731 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVPS 3778
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3779 ELKCDGTADCLDASDEA 3795
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 114/271 (42%), Gaps = 66/271 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNA---------ECTPGQFS 211
C P C ++ +CV S CD DC +G DE CNA C P +F
Sbjct: 2719 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFV 2777
Query: 212 C------------------------GMGKC------IPESWKCDGFVDCLEDGSDEPNTC 241
C G KC IP + CDG DC ++ + P C
Sbjct: 2778 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDCGDNSDENPTYC 2837
Query: 242 I-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQC 297
H C + + QC S +CIP +W CD+E+DCS D +DE H C + +C
Sbjct: 2838 TTHTCSSSEFQCT-SGRCIPQHWYCDQEIDCS-----DASDEPASCGHPERTCLADEFKC 2891
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS----SNQC 353
+CIP W+CD + DC D +DED +++ N C +E C + +C
Sbjct: 2892 DRG-RCIPSEWICDGDNDCG-----DMSDED-ERHQCQNQN-CSDSEFLCVNDRPPDRRC 2943
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ S CDG DC++G DE C + EN
Sbjct: 2944 IPQSWVCDGDVDCTDGYDENQNCTRRTCSEN 2974
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 138/348 (39%), Gaps = 98/348 (28%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ----------- 138
W PA ++ +A G + P+V + WP+ L ID+ +
Sbjct: 844 FFTDWFRPA--------KIMRAWSDGSHLLPIVNTTLGWPNGLAIDWARLGHIEQMTHPF 895
Query: 139 ------DILYWCDSHLNTVESVR-VDGSHNAVL-----------CHPNELRCGS------ 174
+ L++ D L V VR DG V+ + ++ GS
Sbjct: 896 GLAIFGEHLFFTDWRLGAVIRVRKADGGEMTVIRSGIAYILHLKSYDVNIQTGSNACNQP 955
Query: 175 -------SNQCVALSKF------------------CDGKPDCSNGEDEGPFCNAECTPGQ 209
S+ C + F C+G P +E P +C
Sbjct: 956 THPNGDCSHFCFPVPNFQRVCGCPYGMRLASNHLTCEGDP-----TNEPP--TEQCGVFS 1008
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
F C G+C+P ++CDG DC D SDE T + C + C + +CIP +W CD+
Sbjct: 1009 FPCKNGRCVPSYYRCDGVNDC-HDNSDEQLCGTLNNTCSSSAFTCG-NGECIPAHWRCDK 1066
Query: 268 EMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC VD +DE H C + Q C + +CI NW+CD + DC D
Sbjct: 1067 RNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DG 1115
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE ++ +C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1116 SDEK----NCNSTEICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1158
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHN 262
C GQF C G C C+ +C DGSDE H C + + QCA +K+CIP +
Sbjct: 3518 CRLGQFQCNDGNCTSPQTLCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPES 3575
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD DC DN+DED C GQ +CA + +CIP W CD + DC
Sbjct: 3576 WQCDTFNDCE-----DNSDEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG--- 3626
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D++DE ++ S + + E C ++ +C+ C+G DC + DE
Sbjct: 3627 --DHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAACNGVDDCRDNSDE 3676
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 118/298 (39%), Gaps = 76/298 (25%)
Query: 181 LSKFC--DGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
L FC DG PDC EC F CG G CIP W+CDG DC +D +DE
Sbjct: 16 LIMFCSADGLPDCR-----------ECDSEHFRCGNGHCIPADWRCDGTKDCSDD-TDEI 63
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWL----------CDEEMDCSTDDIVDNTDEDWDKFH 288
+ C G +C +CIP++W+ DE CS
Sbjct: 64 GCAVVTCQQGYFKCQSEGQCIPNSWVCDQDQDCDDGSDEHQGCSQS-------------- 109
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C + Q+ C+ + +CIP + CD DC D DE+ +Y + + C
Sbjct: 110 TCSSHQITCS-NGQCIPGEYRCDHVRDCP-----DGADENDCQYPTCEQLTC-------- 155
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE----------------------GPFCNNKADCENLK 386
+ C S+ CD K DC + DE C++ +DC++
Sbjct: 156 DNGACYNTSQKCDWKVDCRDSSDEINCTEICLHNEFSCGSGECIPHAYVCDHDSDCQDGS 215
Query: 387 CSHKCS-PTPRGAMCFCPAGQNPNKTQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
H C+ PT G CP+G+ + D D+C +G D +++H + CS E
Sbjct: 216 DEHACNYPTCGGYQFTCPSGRCIYQNWVCDGEDDCKDNGDEDGCESSSHGVHKCSPRE 273
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 185 ICLHNEFSCGSG-ECIPHAYVCDHDSDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 243
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + + +H+C + C S +CI +CD +DC
Sbjct: 244 CDGEDDCKDNGDEDGCESSSHGVHKCSPREWSCPESGRCISIYKVCDGILDC 295
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3266 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3322
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+HL +E ++G
Sbjct: 3323 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3374
Query: 159 S-----HNAVLCHP 167
++ L HP
Sbjct: 3375 HRRHTVYDGTLPHP 3388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4121 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4180
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV K++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4181 NGEDRNILVFKDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4232
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 44/280 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V
Sbjct: 2506 MHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKIERSTLTGMDREV 2565
Query: 164 LCHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-E 220
+ + G + Q + + + +N D G+ + +
Sbjct: 2566 IVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQ 2625
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCST 273
+C+ + G C H C G + QC PH NW L + C
Sbjct: 2626 KEQCNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC-- 2670
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
IVDN + C NG +CI W CD + DC D +DE
Sbjct: 2671 --IVDNGERCAASSFTCSNG--------RCISKEWKCDNDNDCG-----DGSDEMESVCA 2715
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H C P C ++ +CV S CD DC +G DE
Sbjct: 2716 LHT---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2751
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 538 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 597
Query: 165 CHPNEL 170
H L
Sbjct: 598 VHGGSL 603
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1489 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1547
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1548 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNG 1607
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1608 HHRRQVIASDLIIRHPYAL 1626
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 67/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2088 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2147
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2148 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2207
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + + ++G ++ V+
Sbjct: 2208 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIHINGENSEVI 2249
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1471 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1528
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 631 NKFAETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 685
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 686 DGLGFRCKCTFGFQLGTDERHCIAVQ------NFLIFSSQVAIRGI 725
>gi|297264242|ref|XP_001104179.2| PREDICTED: low-density lipoprotein receptor-related protein 2
isoform 2 [Macaca mulatta]
Length = 4639
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 121/325 (37%), Positives = 159/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPGEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIPH ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPHAYVCDHDSDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + SH C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSSHGVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENSTTTGKYCSTTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILE-RGQHCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESW 222
+C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI +
Sbjct: 1148 ICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCISVTN 1205
Query: 223 KCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+CDG DC D SDE P C + + QC CIP+ W CD DC +
Sbjct: 1206 RCDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYG 1259
Query: 280 TDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+DE + C NG CI WLCD + DC D +DE K
Sbjct: 1260 SDEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---K 1303
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHK 390
C + +C N CV LS CDG DC NG DE P CN N N C+H+
Sbjct: 1304 DCPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHE 1363
Query: 391 CSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C P GA C CP G N +KT C D DEC I GSC Q C N S+ C+C GY L
Sbjct: 1364 CVQEPFGAKCLCPLGFLLANDSKT-CEDIDECDIPGSCSQHCYNMRGSFRCACDTGYMLE 1422
Query: 448 PDGKSCTAV 456
DG++C
Sbjct: 1423 SDGRTCKVT 1431
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 164/412 (39%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2806 CQSGYTTCQNSNICIPRIYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2865
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD +DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2866 YCDQEIDCF-DASDEPASCGHPERTCLADEFKCDRG-RCIPSEWICDGDNDCG-----DM 2918
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2919 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2971
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2972 CTRRTCSENEFTCGYGLCIPEIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3031
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3032 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3091
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC C Q C
Sbjct: 3092 GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTETPFVCSQKC 3151
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3152 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3200
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 143/365 (39%), Gaps = 62/365 (16%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3703 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3761
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + DC D SDE + + C QC S C+P CD DC +D +DE
Sbjct: 3762 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVPSELKCDGTADC-----LDASDEA 3814
Query: 284 ----------------------------W-------------DKFHQCFNGQVQCALSKK 302
W ++ H C N +
Sbjct: 3815 DCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLNVPCNSPNRFR 3874
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C + + E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3875 CDNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPNDNVCDD 3933
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDAD 417
DC + DE G + C C C+ G +C C AG N +T C+D +
Sbjct: 3934 ADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDIN 3993
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIR 475
EC G+C Q C NT SY C C +G+T D GK C A + ++ V IR
Sbjct: 3994 ECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAA----EGSSPLLLLPDNVRIR 4049
Query: 476 RIHLN 480
+ +L+
Sbjct: 4050 KYNLS 4054
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3495 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3554
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QC +K+CIP +W CD DC DN+
Sbjct: 3555 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFNDCE-----DNS 3607
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3608 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3661
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3662 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3695
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 153/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3272 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3328
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3329 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3380
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3381 HRRHTVYDGSLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3440
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3441 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3498
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3499 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3556
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QC +K+CIP +W CD DC D
Sbjct: 3557 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFNDCE-----D 3605
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3606 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3650
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPSYYRCDGVNDCHDNSDEQLCGTLNNTCSSSAFTCGNGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTEIC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++ CDG DCS+ DE
Sbjct: 1197 GDKCISVTNRCDGVFDCSDNSDEA 1220
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 115/273 (42%), Gaps = 71/273 (26%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RCG+S+ +C++ CD DC +G DE A C+P F+C G+C+
Sbjct: 2680 NGERCGASSFTCSNGRCISKEWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCANGRCVQ 2739
Query: 220 ESWKCDGFVDCLEDGSDEPN-----------------TCI-------------------- 242
S++CD + DC DGSDE CI
Sbjct: 2740 YSYRCDYYNDC-GDGSDEAGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNTSDE 2798
Query: 243 -----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQV 295
C +G C S CIP +LCD + DC DN+DE+ + H C + +
Sbjct: 2799 KNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCG-----DNSDENPTYCTTHTCSSSEF 2853
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC S +CIP +W CD+E+DC D +DE H C +E +C +C+
Sbjct: 2854 QCT-SGRCIPQHWYCDQEIDC-----FDASDE--PASCGHPERTCLADEFKC-DRGRCIP 2904
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + C+N CS
Sbjct: 2905 SEWICDGDNDCGDMSDE----DERHQCQNQNCS 2933
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3578 CDSNEWQC-TNKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3636
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3637 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3695
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3696 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3749
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3750 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVPS 3797
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3798 ELKCDGTADCLDASDEA 3814
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 177 QCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
+C+ C+G +C +N DE + C G +C CIP + CDG DC ++
Sbjct: 2776 RCIPREFVCNGVDNCHDNNTSDEKNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCGDN 2835
Query: 234 GSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---Q 289
+ P C H C + + QC S +CIP +W CD+E+DC D +DE H
Sbjct: 2836 SDENPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQEIDC-----FDASDEPASCGHPERT 2889
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + +C +CIP W+CD + DC D +DED +++ N C +E C +
Sbjct: 2890 CLADEFKCDRG-RCIPSEWICDGDNDCG-----DMSDED-ERHQCQNQN-CSDSEFLCVN 2941
Query: 350 ----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+C+ S CDG DC++G DE C + EN
Sbjct: 2942 DRPPDRRCIPQSWVCDGDVDCTDGYDENQNCTRRTCSEN 2980
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C + +CIP
Sbjct: 1025 QCGIFSFPCKNGRCVPSYYRCDGVNDC-HDNSDEQLCGTLNNTCSSSAFTCG-NGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ +C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTEICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 110/273 (40%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSEHFRCGSGHCIPADWRCDGTKDCSDD-TDEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE CS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDEHQGCSQS--------------TCSSHQITCS-NGQCIPGEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ +DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPHAYVCDHDSDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D +++H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSSHGVHKCSPRE 270
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGSG-ECIPHAYVCDHDSDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + + +H+C + C S +CI +CD +DC
Sbjct: 241 CDGEDDCKDNGDEDGCESSSHGVHKCSPREWSCPESGRCISIYKVCDGILDC 292
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 44/280 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V
Sbjct: 2512 MHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKIERSTLTGMDREV 2571
Query: 164 LCHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-E 220
+ + G + Q + + + +N D G+ + +
Sbjct: 2572 IVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQ 2631
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCST 273
+C+ + G C H C G + QC PH NW L + C
Sbjct: 2632 KEQCNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC-- 2676
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
IVDN + C NG +CI W CD + DC D +DE
Sbjct: 2677 --IVDNGERCGASSFTCSNG--------RCISKEWKCDNDNDCG-----DGSDEMESVCA 2721
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H C P C ++ +CV S CD DC +G DE
Sbjct: 2722 LHT---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2757
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4140 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4199
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4200 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4251
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P+V + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHLCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P + CD DC
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGIFSFPCKNG--------RCVPSYYRCDGVNDCH- 1052
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ C + CG+ +C+ CD + DC +G DE
Sbjct: 1053 ----DNSDEQLCGTLNNT---CSSSAFTCGNG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFAETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|157104069|ref|XP_001648242.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108869278|gb|EAT33503.1| AAEL014222-PA [Aedes aegypti]
Length = 1847
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 180/394 (45%), Gaps = 69/394 (17%)
Query: 144 CDSHLN---TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--- 197
CD H++ + ++ +G CH ++ C C+ ++ CDG PDC +G DE
Sbjct: 1018 CDEHVDCGDGSDEMKCEGYDRGTGCHEHQHAC-PDGMCIDVNTLCDGFPDCLDGSDEVGC 1076
Query: 198 ----GPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQV 250
NA C P F C MG+CIP+ W+CDG DC DGSDE + C+ + C G
Sbjct: 1077 TDLTNEKSNATTCGPLMFRCNMGQCIPKWWECDGNPDC-TDGSDEHDKCLTKTDCGAGFT 1135
Query: 251 QCALSKKCIPHNWLCDEEMDCS--TDDI---------VDNTDEDWDKF-----HQCFNGQ 294
+CAL CI LCD DC +D++ V D++ K+ +C +
Sbjct: 1136 KCALGH-CIEDRLLCDGNNDCGDNSDELNCKVELEPCVGLEDDNPTKYLCPRSGKCLDIA 1194
Query: 295 VQCA------------------------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
V+C S KCI W CD+E+DC DD D D
Sbjct: 1195 VRCNGTAECPDGEDEAGCSNCGLQEFQCKSGKCIRKEWRCDKEVDC--DDGSDEVDCVNG 1252
Query: 331 KYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
H V C C C+ +S+ C+GK DC +G+DEG C++ C C
Sbjct: 1253 TAAEHLEVHVACGEGTFEC-KPGVCIEMSQVCNGKKDCDDGKDEGKGCDDA--CAKSPCE 1309
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
HKC TP GA+C C G PNK C+D DEC C Q C NT SY CSC G+ L
Sbjct: 1310 HKCIKTPTGAICECREGFTLAPNKKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFML 1369
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
R D SC AV + ++++S IR++ +N
Sbjct: 1370 RSDKISCKAVGPSR----YVLYTSYNQIRKLEVN 1399
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 156/338 (46%), Gaps = 45/338 (13%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGK-CI 218
A C NE RC + C+ C+G DC++G DE C P + C K CI
Sbjct: 41 KAPACAENEYRC-DNGACIPDVNHCNGAKDCTDGSDEVGCDYFLCKKPMWYRCKHDKSCI 99
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCS 272
++ CD DC G DE N + + V C+ K CIP + +CD C
Sbjct: 100 SATFLCDKHDDC-PLGDDEENCENFEVPHVPVPCSKFEFTCTDKMCIPLDLVCDGVSHC- 157
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCA----LSKKCI-PHNWLCDEEMDCSTDDIVDNTDE 327
+D +DE C + + +C +K+CI H+W+CD DD D +DE
Sbjct: 158 ----LDGSDETIG----CKDIENKCKGFVCKNKRCINSHDWVCD-----GIDDCGDGSDE 204
Query: 328 DWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ N + + C ++ CV L CDGK DC + DEG CN+K +C++
Sbjct: 205 E-------NCFIGCDLEHGKFECADNSTCVDLKLVCDGKDDCGDHSDEGGSCNSK-ECDS 256
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
++C C TP GA+C C G NK C D +EC G C Q C NT S+ C+C +
Sbjct: 257 MRCPEGCKATPHGAVCLCKPGFRFNKKSKVCEDINECERYGLCSQGCENTPGSFKCTCVD 316
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ L+ D ++C + EP +++++ I +HLN
Sbjct: 317 KFKLKDDSRTCELDD--STEPL-LLYTTQKSIGGLHLN 351
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 90/223 (40%), Gaps = 58/223 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--------GKCIPE 220
E +C +S +C+ +SK C+G DC++G DE C+ P Q C KCI +
Sbjct: 957 EFKC-TSGECLTISKRCNGNKDCADGSDEKG-CDEAGQPKQLHCQYDEFMCADKSKCIDQ 1014
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ +CD VDC DGSD EM C
Sbjct: 1015 TRRCDEHVDC-GDGSD-------------------------------EMKC--------- 1033
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDKYFSHNAVL 339
E +D+ C Q C CI N LCD DC D V TD +K NA
Sbjct: 1034 -EGYDRGTGCHEHQHACP-DGMCIDVNTLCDGFPDCLDGSDEVGCTDLTNEK---SNATT 1088
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
C P RC + QC+ CDG PDC++G DE C K DC
Sbjct: 1089 CGPLMFRC-NMGQCIPKWWECDGNPDCTDGSDEHDKCLTKTDC 1130
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA----- 162
+ AGM G+N+ L+ ++I WP+ L +D+ LYW D+ L +ES+RVDG++
Sbjct: 474 IGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIRVDGTNRVTVLAD 533
Query: 163 VLCHP 167
VL HP
Sbjct: 534 VLKHP 538
>gi|338715564|ref|XP_001494319.3| PREDICTED: low-density lipoprotein receptor-related protein 2
[Equus caballus]
Length = 4905
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 164/361 (45%), Gaps = 61/361 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + +C S C+ S CD + DC +G DE C+ Q +C G+CIP ++C
Sbjct: 316 CQSGQFKCQSEGLCIPHSWVCDDEHDCEDGSDEQHCRGTTCSSDQITCSSGECIPNEFRC 375
Query: 225 DGFVDCLEDGSDE------------------------------------PNTCIHQCFNG 248
D DC DG+DE N C C
Sbjct: 376 DHTRDC-SDGTDERDCHYPTCTQLTCANGACYNISQVCDGKADCRDSSDENNCTKICSQN 434
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+ QC S +CIPH +LCD + DC D +DE+ + C + C S CI +W
Sbjct: 435 EFQCG-SGECIPHAYLCDHDHDCE-----DGSDENSCTYQTCRGNEFTCP-SGYCISQDW 487
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD E DC+ DN DED + +H+ C+P E C S +C+ + K CDG DC
Sbjct: 488 VCDGEDDCT-----DNGDEDGCESSTHHIHKCYPGEWACPGSGKCIPIGKVCDGTLDCPA 542
Query: 369 GEDEGPFCNNK----ADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADECL 420
GEDE + C L C ++C +P G MC+CP+G QN + CVD D+C
Sbjct: 543 GEDESNITQGQNCDVNLCPLLGCEYQCHMSPHGGMCYCPSGFIVDQNSTR-NCVDFDDCE 601
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
I G CDQ C + + C C EGY L + C A N E AS+IFS+ D+ ++
Sbjct: 602 IWGICDQMCEDRVGHHQCHCAEGYILEHQ-RHCKA-NTSSGE-ASVIFSNGRDLLIGDIH 658
Query: 481 G 481
G
Sbjct: 659 G 659
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 109/301 (36%), Positives = 138/301 (45%), Gaps = 27/301 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C P + RC ++C+ LS CDG DC +G DE C CT QF C +CI +
Sbjct: 1398 CLPTQFRC-PGHRCIDLSFVCDGDSDCVDGSDEQA-CFINCTASQFKCASENRCISNVYH 1455
Query: 224 CDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE + C + QC CIP +W CD DC + +
Sbjct: 1456 CDGVFDCT-DHSDETDCSTRPSGMCHPDEFQCQADGTCIPGSWECDGHRDC-----ISGS 1509
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C C + C+ WLCD + DC D +DE K A
Sbjct: 1510 DEHQGCSPRTCPPSHFLCD-NGNCVYKEWLCDGDNDCR-----DMSDE---KDCPTQAFH 1560
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C + +C + CV LS C+G DC NG DE P CN ++ N C+H+C P GA
Sbjct: 1561 CPVGQWQCPGHSVCVNLSAVCNGISDCPNGTDESPLCNQESCSDSNAGCTHQCIQGPFGA 1620
Query: 399 MCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C CP G N +KT C D DEC I G C Q C N S+ C C + Y L DG++C
Sbjct: 1621 QCLCPLGFLLANDSKT-CEDIDECEIPGYCSQHCYNMRGSFRCWCDKEYMLDTDGRTCKV 1679
Query: 456 V 456
Sbjct: 1680 T 1680
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 165/358 (46%), Gaps = 78/358 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C P ++C ++N C+ CDG DC + DE P FC ++ C+ +F C G+CIP W
Sbjct: 3071 CRPGYIKCQTTNICIPRLYLCDGDNDCGDMSDESPIFCASQTCSSTEFQCTSGRCIPIHW 3130
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP+TC+H C + + +C S +CI W+CD + DC D
Sbjct: 3131 YCDQERDC-SDGSDEPSTCVHDEPTCLSDEFKCD-SGRCIQREWICDGDNDCG-----DM 3183
Query: 280 TDEDWDKFHQCFN-----GQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+DED + HQC N Q C S ++CIP +W+CD + DC+ + +D
Sbjct: 3184 SDED--ERHQCENRSCSGSQFHCVHSTPPSRRCIPQSWVCDGDADCA---------DGYD 3232
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCN-NKADCENL 385
++ + C NE C S+ CV S CD + DC + DE P CN N+ C+N
Sbjct: 3233 EHQNCTRRSCSENEFTC-SNGLCVPHSYRCDWRNDCGDYSDERECSYPTCNENQFTCQNG 3291
Query: 386 KCSHKC-----------SPTPRGAMCFCPAGQ-NPNKTQCVDA------------DECLI 421
C +K +C P +P++ +C + D+CL
Sbjct: 3292 ICIYKVYTCDGENDCGDDSDELEHLCHTPETTCHPHQFKCDNGNCIEMVKVCNHLDDCLD 3351
Query: 422 DG----------------SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+ CDQ CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3352 NSDEKGCGINECNDASLSGCDQNCTDTLTSFYCSCHPGYKLMSDKRTCNDIDECKETP 3409
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 149 NTVESVRVD-GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CT 206
++ +++R+D +H LC + C ++ +C+ + CDG+ DCS+G DE C C
Sbjct: 3744 DSFQALRLDDRTHCLPLCSSTQFLCANNEKCIPIWWKCDGQRDCSDGSDEPTICPPRYCR 3803
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWL 264
GQF C G C + C+ DC DGSDE + HQC + + QCA +K+CIP W
Sbjct: 3804 LGQFQCKDGNCTSPHFLCNAHEDC-PDGSDEDHILCEHHQCESNEWQCA-NKRCIPEAWQ 3861
Query: 265 CDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD E DC DN+DED C G CA + +CIP NW CD + DC
Sbjct: 3862 CDSENDCE-----DNSDEDSSHCARRICQPGYFMCA-NGRCIPQNWKCDVDNDCG----- 3910
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE + S + E C ++ +C+ C+G DC + DE C
Sbjct: 3911 DYSDEPIQECMSAAHRCDNYTEFSCRTNYRCIPQWAVCNGFNDCRDNSDE-------QGC 3963
Query: 383 ENLKC---------SHKCSP 393
E + C +H+C P
Sbjct: 3964 EEMTCNPVGDFRCKNHRCIP 3983
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 126/280 (45%), Gaps = 49/280 (17%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
AEC F C G CIP SW+CDG DCL+D SDE C +GQ +C CIPH+
Sbjct: 275 AECDSEHFRCENGHCIPASWRCDGTKDCLDD-SDETGCPPSSCQSGQFKCQSEGLCIPHS 333
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
W+CD+E DC D +DE + C + Q+ C+ S +CIP+ + CD DCS
Sbjct: 334 WVCDDEHDCE-----DGSDEQHCRGTTCSSDQITCS-SGECIPNEFRCDHTRDCS----- 382
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------- 372
D TDE Y + + C ++ C +S+ CDGK DC + DE
Sbjct: 383 DGTDERDCHYPTCTQLTC--------ANGACYNISQVCDGKADCRDSSDENNCTKICSQN 434
Query: 373 ------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNKTQCVDA-DE 418
C++ DCE+ + C+ T RG CP+G ++ D D+
Sbjct: 435 EFQCGSGECIPHAYLCDHDHDCEDGSDENSCTYQTCRGNEFTCPSGYCISQDWVCDGEDD 494
Query: 419 CLIDGSCDQTCTNTHLSYVC-----SCTEGYTLRPDGKSC 453
C +G D ++TH + C +C P GK C
Sbjct: 495 CTDNGDEDGCESSTHHIHKCYPGEWACPGSGKCIPIGKVC 534
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 141/330 (42%), Gaps = 32/330 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RCG + C+ + CD DC + DE C PG F C G C+P+ KC
Sbjct: 4008 CTESEFRCGDQS-CIPSRQICDHFDDCGDNSDERDCDMRTCHPGYFQCNSGHCMPDQLKC 4066
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DGF DC D SDE C + NG A +C H +C ++ D D D
Sbjct: 4067 DGFADCF-DSSDEA-ACPTRFPNGAYCPATEFECKNH--VC-VQLSWKCDGDDDCGDGSD 4121
Query: 285 DKFHQCFNGQVQCAL-------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
++ H C N V C + +CI + LC++ DC D +DE +
Sbjct: 4122 EELHLCLN--VTCVSPNRFRCDNNRCIYSHELCNQIDDCG-----DGSDEKKENCADPTP 4174
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPR 396
C +E +C S+ C++ CD DC + DE G + C C H C+
Sbjct: 4175 RPCKEDEFKC-SNGHCISQHLVCDDFDDCGDHFDETGCNTGKERSCAENLCEHNCTQLKE 4233
Query: 397 GA-MCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--G 450
G +C C G ++ C D +EC G C Q C NT SY CSC +G+ D G
Sbjct: 4234 GGFICTCRPGFKASTLDRNSCDDINECEQFGVCPQNCHNTKGSYECSCAQGFKSMGDDYG 4293
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
K C A P + + V IR+ +L+
Sbjct: 4294 KRCAA----DGNPPLFLLAENVRIRKYNLS 4319
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 138/350 (39%), Gaps = 89/350 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D +D+LYW D+ L +E + G V+
Sbjct: 2778 NAKIERATLGGNFRVPIVNSSLVWPNGLALDTEEDLLYWADASLLKIERSTLTGLEREVI 2837
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKFC-----------DGK 188
HP L + S Q ++F D +
Sbjct: 2838 VSATFHPFGLTLYGQYIYWTDFSAKKVYRANKYDGSGQMAMTTRFSFEPEGIRVVVKDQQ 2897
Query: 189 PDCSNGEDE-GPFCNAECTPG----------------------------------QFSCG 213
CSN DE C+ C PG +F+C
Sbjct: 2898 RQCSNPCDEFNGGCSHICAPGPNGAECQCPHEGRWYLANDNKHCIVDNGTRCDSSKFTCL 2957
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G CI E WKCD DC DGSDE + H C C + +C+ +++ CD DC
Sbjct: 2958 NGHCISEQWKCDNDNDC-GDGSDELESVCAFHTCPLTAFTCD-NGRCVRYHYRCDHYNDC 3015
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DN+DE F C +++CIP ++C+ +C +D D + D+
Sbjct: 3016 G-----DNSDEAGCLFRDCNATTEFTCSNRRCIPLQFVCNGINNCHDNDTSDEKNCP-DR 3069
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
C P ++C ++N C+ CDG DC + DE P FC ++
Sbjct: 3070 -------TCRPGYIKCQTTNICIPRLYLCDGDNDCGDMSDESPIFCASQT 3112
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 78/332 (23%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N+S +++ I WP+ + IDY D+LYW D+HL +E ++G+H +
Sbjct: 3595 IGRVGMDGTNKSVIISTKIVWPNGITIDYTNDLLYWADAHLGYIEYSDLEGNHRHTVYDG 3654
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+L HP + + S++ V ++ P
Sbjct: 3655 MLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRMVLVNTTHKPFDIHVYHPYRQPIV 3714
Query: 202 NAECTPGQFSCG---MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
N C C + K + + C+ D+ C+ C + Q CA ++KC
Sbjct: 3715 NNPCGTNNGGCSHLCLIKAGGKGFTCECPDSFQALRLDDRTHCLPLCSSTQFLCANNEKC 3774
Query: 259 IPHNWLCDEEMDCST-----------------------------------DDIVDNTDED 283
IP W CD + DCS +D D +DED
Sbjct: 3775 IPIWWKCDGQRDCSDGSDEPTICPPRYCRLGQFQCKDGNCTSPHFLCNAHEDCPDGSDED 3834
Query: 284 WD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLC 340
+ HQC + + QCA +K+CIP W CD E DC DN+DED SH A +C
Sbjct: 3835 HILCEHHQCESNEWQCA-NKRCIPEAWQCDSENDCE-----DNSDED----SSHCARRIC 3884
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P C ++ +C+ + CD DC + DE
Sbjct: 3885 QPGYFMC-ANGRCIPQNWKCDVDNDCGDYSDE 3915
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 121/297 (40%), Gaps = 72/297 (24%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG-- 198
HL VE D SH + H CGS + +CV CDG DC + DE
Sbjct: 1258 HLTCVE----DPSHEPPIEH-----CGSFSFTCNNGRCVPTYYRCDGVDDCHDNSDEHLC 1308
Query: 199 PFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCAL 254
N C+P F+CG G+CIP W+CD DC+ DGSDE P C C
Sbjct: 1309 GTSNNTCSPSAFTCGHGGECIPGHWRCDRHADCV-DGSDEQNCPTQTPTSCPASSFTCD- 1366
Query: 255 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 279
+ CI NW+CD + DC D VD
Sbjct: 1367 NHHCISRNWVCDTDNDCGDGSDEKDCELPETCLPTQFRCPGHRCIDLSFVCDGDSDCVDG 1426
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE F C Q +CA +CI + + CD DC+ D D TD + + +
Sbjct: 1427 SDEQ-ACFINCTASQFKCASENRCISNVYHCDGVFDCT--DHSDETDCS-----TRPSGM 1478
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA------DCENLKCSHK 390
CHP+E +C + C+ S CDG DC +G DE C+ + C+N C +K
Sbjct: 1479 CHPDEFQCQADGTCIPGSWECDGHRDCISGSDEHQGCSPRTCPPSHFLCDNGNCVYK 1535
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 107/222 (48%), Gaps = 25/222 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGE--DEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDC 230
S+ +C+ L C+G +C + + DE + C PG C CIP + CDG DC
Sbjct: 3038 SNRRCIPLQFVCNGINNCHDNDTSDEKNCPDRTCRPGYIKCQTTNICIPRLYLCDGDNDC 3097
Query: 231 LEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH- 288
+ + P C Q C + + QC S +CIP +W CD+E DCS D +DE H
Sbjct: 3098 GDMSDESPIFCASQTCSSTEFQCT-SGRCIPIHWYCDQERDCS-----DGSDEPSTCVHD 3151
Query: 289 --QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + + +C S +CI W+CD + DC D +DED +++ N C ++
Sbjct: 3152 EPTCLSDEFKCD-SGRCIQREWICDGDNDCG-----DMSDED-ERHQCENRS-CSGSQFH 3203
Query: 347 C----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C S +C+ S CDG DC++G DE C ++ EN
Sbjct: 3204 CVHSTPPSRRCIPQSWVCDGDADCADGYDEHQNCTRRSCSEN 3245
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 20/224 (8%)
Query: 157 DGSHNAVLCHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQF 210
DGS +C P R G C + C+ DC +G DE + +C ++
Sbjct: 3789 DGSDEPTICPPRYCRLGQFQCKDGNCTSPHFLCNAHEDCPDGSDEDHILCEHHQCESNEW 3848
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEM 269
C +CIPE+W+CD DC ++ ++ + C + C G CA + +CIP NW CD +
Sbjct: 3849 QCANKRCIPEAWQCDSENDCEDNSDEDSSHCARRICQPGYFMCA-NGRCIPQNWKCDVDN 3907
Query: 270 DCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D + E H+C N + C + +CIP +C+ DC DN+DE
Sbjct: 3908 DCG-DYSDEPIQECMSAAHRCDNYTEFSCRTNYRCIPQWAVCNGFNDCR-----DNSDEQ 3961
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + N V + RC +++C+ L CDG DC + DE
Sbjct: 3962 GCEEMTCNPV----GDFRC-KNHRCIPLRWKCDGHNDCGDHSDE 4000
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE +CGS +C+ + CD DC +G DE C +F+C G CI + W
Sbjct: 430 ICSQNEFQCGSG-ECIPHAYLCDHDHDCEDGSDENSCTYQTCRGNEFTCPSGYCISQDWV 488
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + IH+C+ G+ C S KCIP +CD +DC
Sbjct: 489 CDGEDDCTDNGDEDGCESSTHHIHKCYPGEWACPGSGKCIPIGKVCDGTLDC 540
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 161/436 (36%), Gaps = 90/436 (20%)
Query: 51 ILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP--------APEIF 102
++ G +L+ ++ +N ++VS +RL +++ + + P A IF
Sbjct: 1030 MVEGVESLSFDWISKNLYWTEASYKSVSVMRLADKSRREIIKNVNNPRSIVVHPIAGYIF 1089
Query: 103 PLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
D ++ +A G N P+V + WP+ L ID+ LYW D+ + +E DG
Sbjct: 1090 FSDWYRPAKILRAWSDGSNVVPIVNTTLGWPNGLAIDWGALRLYWVDAFFDKIEHSTFDG 1149
Query: 159 SHNAVLCHPNEL------------------RCGSSNQC------------VALSKFCDGK 188
S L H ++ R G+ + +SK K
Sbjct: 1150 SERRALGHIPQMAHPFGLTVFQDYLFFTDWRLGAIVRVRKTDGGDRTVIRSGISKIMQVK 1209
Query: 189 PDCSNGEDEGPFCNAECTPG-------------QFSCGMGKCIPESWKCDGFVDCLEDGS 235
+N + +CN P Q CG C + C+ED S
Sbjct: 1210 SYDANTQTGSNYCNRPTHPNGDCSHFCFPVPNLQRVCG---CPYGMTLTSNHLTCVEDPS 1266
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCFNG 293
EP I C + C + +C+P + CD DD DN+DE + C
Sbjct: 1267 HEPP--IEHCGSFSFTCN-NGRCVPTYYRCD-----GVDDCHDNSDEHLCGTSNNTCSPS 1318
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
C +CIP +W CD DC VD +DE + C + C ++ C
Sbjct: 1319 AFTCGHGGECIPGHWRCDRHADC-----VDGSDE--QNCPTQTPTSCPASSFTC-DNHHC 1370
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQC 413
++ + CD DC +G DE DCE C PT CP + + +
Sbjct: 1371 ISRNWVCDTDNDCGDGSDE-------KDCE---LPETCLPT----QFRCPGHRCIDLSFV 1416
Query: 414 VDADECLIDGSCDQTC 429
D D +DGS +Q C
Sbjct: 1417 CDGDSDCVDGSDEQAC 1432
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 109/272 (40%), Gaps = 69/272 (25%)
Query: 168 NELRCGSS------NQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPG---- 208
N RC SS C++ CD DC +G DE P C G
Sbjct: 2945 NGTRCDSSKFTCLNGHCISEQWKCDNDNDCGDGSDELESVCAFHTCPLTAFTCDNGRCVR 3004
Query: 209 -----------------------------QFSCGMGKCIPESWKCDGFVDCLE-DGSDEP 238
+F+C +CIP + C+G +C + D SDE
Sbjct: 3005 YHYRCDHYNDCGDNSDEAGCLFRDCNATTEFTCSNRRCIPLQFVCNGINNCHDNDTSDEK 3064
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQ 296
N C G ++C + CIP +LCD + DC D +DE + C + + Q
Sbjct: 3065 NCPDRTCRPGYIKCQTTNICIPRLYLCDGDNDCG-----DMSDESPIFCASQTCSSTEFQ 3119
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C S +CIP +W CD+E DCS D +DE H+ C +E +C S +C+
Sbjct: 3120 CT-SGRCIPIHWYCDQERDCS-----DGSDE--PSTCVHDEPTCLSDEFKC-DSGRCIQR 3170
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + CEN CS
Sbjct: 3171 EWICDGDNDCGDMSDE----DERHQCENRSCS 3198
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 67/140 (47%), Gaps = 10/140 (7%)
Query: 136 YNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
Y+ D ++ C H + + S R G +CHP+E +C + C+ S CDG DC +G
Sbjct: 1454 YHCDGVFDCTDHSDETDCSTRPSG-----MCHPDEFQCQADGTCIPGSWECDGHRDCISG 1508
Query: 195 EDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQ 251
DE C+ C P F C G C+ + W CDG DC + D D P H C GQ Q
Sbjct: 1509 SDEHQGCSPRTCPPSHFLCDNGNCVYKEWLCDGDNDCRDMSDEKDCPTQAFH-CPVGQWQ 1567
Query: 252 CALSKKCIPHNWLCDEEMDC 271
C C+ + +C+ DC
Sbjct: 1568 CPGHSVCVNLSAVCNGISDC 1587
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WP+ L IDY +LY+ D++L+ ++ DG H
Sbjct: 1827 RIERASMDGSLRTVIVQDKIFWPNGLTIDYPNRLLYFMDAYLDYIDFCDYDGQHRRQVIA 1886
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1887 SDLILRHPYAL 1897
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S R+ A+++ W D PA + + + ++E A M
Sbjct: 4405 IYWSDAKSQRIEVAKLDGRYRKWLISTQLDQPAAVVVNPKLGLMYWTDWGKEPKIESAWM 4464
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGS 159
G++R LV +++ WP+ L IDY N D +YW D N +E+++ DG+
Sbjct: 4465 DGQHRIILVKEDLGWPTGLSIDYLNNDQIYWSDFKENVIETMKHDGT 4511
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LV + WP+ + +D +YW D + +E+V DG + H
Sbjct: 785 KVERAFMDGTNRKDLVKTKLGWPAGITLDMVSKRVYWVDCRFDYIETVTYDGIQRKTVVH 844
Query: 167 PNEL 170
L
Sbjct: 845 GGSL 848
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 110/296 (37%), Gaps = 71/296 (23%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C + + QC S +CIP +W CD+E DCS D +DE
Sbjct: 3113 CSSTEFQCT-SGRCIPIHWYCDQERDCS-----DGSDE---------------------- 3144
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLE-------KAGM 113
S C + S +C + W D ++ DER + +
Sbjct: 3145 --PSTCVHDEPTCLSDEFKCDSGRCIQREWICDGDNDCGDMSDEDERHQCENRSCSGSQF 3202
Query: 114 HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG 173
H + +P + I P S V D + D D H N C NE C
Sbjct: 3203 HCVHSTPPSRRCI--PQSWVCDGDADCADGYDEHQNCTRRS----------CSENEFTC- 3249
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ CV S CD + DC + DE C QF+C G CI + + CDG DC +D
Sbjct: 3250 SNGLCVPHSYRCDWRNDCGDYSDERECSYPTCNENQFTCQNGICIYKVYTCDGENDCGDD 3309
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE----EMDC---STDDIVDNTDE 282
SDE H C + C PH + CD EM DD +DN+DE
Sbjct: 3310 -SDELE---HLCHTPETTCH------PHQFKCDNGNCIEMVKVCNHLDDCLDNSDE 3355
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL D+P +
Sbjct: 2394 NGVRGIALDWVAGNLYFTNAFLSETLIEVLRINTTYRRVLLKVIVDMPRDIVVDPKNRYL 2453
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ + ++E++ + NR+ LV++ I P L +D+N +YW D L+ + + ++
Sbjct: 2454 FWADYGQNPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHNNGYIYWVDDSLDMIARINIE 2513
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2514 GEESEVI 2520
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + P Q + C D + G C+Q C +H
Sbjct: 876 NKFTETNPETYYRTSLRPFGVTVYHPLRQPYVRNPCGDNN-----GGCEQICVLSHRTDN 930
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L Y C C+ G+ + D + C AV +IFSS V +R I
Sbjct: 931 DGLGYRCKCSLGFDMDADERHCVAVK------QFLIFSSEVAVRGI 970
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 52 LNGTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ + +L L RNQ + Q N+ S+ + I + +D + +F D
Sbjct: 1679 VTASESLLLLVASRNQIVADNITSQVHNIYSLIQDGSHIVAI--DFDSVSGRVFWSDGTQ 1736
Query: 107 -RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++ A +G ++ ++ + S+V+D+ LYW + L T+E ++DGSH VL
Sbjct: 1737 GKIWSAFQNGTDKKVVLDSGVTMTESIVVDWVGRHLYWTNYALETIEVCKLDGSHRTVLI 1796
Query: 166 HPN 168
N
Sbjct: 1797 SEN 1799
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+H+ C+P E C S +C+ + K CDG DC GEDE
Sbjct: 508 THHIHKCYPGEWACPGSGKCIPIGKVCDGTLDCPAGEDE 546
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 6/49 (12%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRI 51
HQC + + QCA +K+CIP W CD E DC DN+DED +RI
Sbjct: 3841 HQCESNEWQCA-NKRCIPEAWQCDSENDCE-----DNSDEDSSHCARRI 3883
>gi|327283157|ref|XP_003226308.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Anolis carolinensis]
Length = 4621
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/363 (33%), Positives = 169/363 (46%), Gaps = 67/363 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C ++ +C S +C+ S CD + DC +G DE C C+ QF+C G+CIP +++
Sbjct: 66 CGGSQFQCLSDGECIPRSWVCDDEEDCEDGSDEHQQCPGRTCSSQQFTCTNGQCIPGTYR 125
Query: 224 CDGFVDCLE------------------------------------DGSDEPNTCIHQCFN 247
CD DC++ D SDE N C C N
Sbjct: 126 CDRVKDCMDETDERGCQYPTCDQLSCSNGACFNASQHCDGKLDCRDASDEAN-CTRGCSN 184
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
Q QC + +CIP +LCD + DC D +DE+ + C G S +CI +
Sbjct: 185 AQFQCG-NGECIPRAFLCDHDDDCG-----DRSDENSCTYATC-KGNFYTCPSGRCIHQS 237
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD + DC DN DE + + C+P E C +S QC+ + K CDG PDC
Sbjct: 238 WICDGDDDCE-----DNADEIGCESGHRD---CYPGEWACPTSGQCIPIGKVCDGTPDCP 289
Query: 368 NGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADE 418
GEDE G C N + C L C ++C +P G CFCPAG N ++T CVD D+
Sbjct: 290 AGEDETNITAGRLC-NISRCAALSCQYRCHSSPSGGTCFCPAGFVISSNDSRT-CVDFDD 347
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C + G CDQ C + + C C EGY L + C A AS+IFS+ D+
Sbjct: 348 CKMWGVCDQVCEDRVGHHQCRCVEGYVLE-HHRHCRANT--SSGVASVIFSNGRDLLVGD 404
Query: 479 LNG 481
L+G
Sbjct: 405 LHG 407
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 145/316 (45%), Gaps = 38/316 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + +C ++C+ CDG DC +G DE C C+ +F C G +CI ++
Sbjct: 1145 CEPGQFQC-PDHRCIDPFYVCDGDKDCIDGADEHD-CIYNCSSTEFKCASGDQCISNYYQ 1202
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP NW CD DC VD +
Sbjct: 1203 CDGVFDC-NDHSDEVNCPTRPPGMCHQNEFQCQSDGNCIPANWECDGHPDC-----VDGS 1256
Query: 281 DEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE H+C L + CI W+CD + DC D+ D +D +
Sbjct: 1257 DE----HHRCPPRTCPPTLFRCDNGNCIYRAWVCDGDNDCR--DMSDESDCPTPPF---- 1306
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + +C + CV LSK CD DC NG DE P CN + N C+H+C P
Sbjct: 1307 --RCPSWQWQCPGHSMCVNLSKVCDNLSDCPNGADESPLCNQETCSDNNAGCTHECIQGP 1364
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
GA C CP G N +KT C D +EC G C Q C N S+ C C EGY L P+GK+
Sbjct: 1365 FGAQCSCPFGYQLANDSKT-CEDINECDPPGFCSQHCHNERGSFRCYCDEGYVLEPNGKT 1423
Query: 453 CTAVNVPQDEPASIIF 468
C EP ++
Sbjct: 1424 CKVA-----EPGYLLL 1434
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 161/417 (38%), Gaps = 117/417 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C +C S+N C+ + CDG DC + DE P + CT +F C G+CIP W
Sbjct: 2818 CQSGYTKCQSTNICIPRTYLCDGDNDCGDMSDESPTHCVSLTCTSSEFRCSSGRCIPAHW 2877
Query: 223 KCDGFVDCLEDGSDEPNTC--------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CD +DC D SDEP++C + C + Q +C +CIP W+CD + DC
Sbjct: 2878 YCDQAIDC-ADSSDEPSSCGKYEVVPPVRSCSSDQFRCD-DGRCIPATWICDGDNDCG-- 2933
Query: 275 DIVDNTDEDWDKFHQCFN-----GQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE D+ H C N + C + ++CIP W+CD + DCS D
Sbjct: 2934 ---DMSDE--DQRHSCANRTCSASEFTCVNNAPPLRRCIPRAWVCDGDADCS-----DAY 2983
Query: 326 DED--------WDKYFSHNAVLCHPNELRCGSSN-------------------------- 351
DE D F+ + LC N RC N
Sbjct: 2984 DEHQNCTRRPCMDHEFTCSNGLCIRNTYRCDRRNDCGDSSDERSCIYQPCPQHQFTCQNG 3043
Query: 352 QCVALSKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN 384
+C++ + CDG DC + DE CN DC +
Sbjct: 3044 RCISKAYICDGDNDCGDESDELEHLCVTPEVTCPPHHFKCDNGNCIEVAKLCNRVDDCLD 3103
Query: 385 -----------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS- 424
C H C+ T C C G NK C D DEC S
Sbjct: 3104 NSDEKGCGINECNDSSISGCDHVCTDTLTSFYCSCHPGYRLMSNKRSCDDVDECSETPSV 3163
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C Q C N+ SY+C C GY PDGKSC + +IFS+ +R + +G
Sbjct: 3164 CSQICENSVGSYICKCAPGYIREPDGKSCRQ---NSNISPYLIFSNRYYLRNLTTDG 3217
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 18/221 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
D +H +C + C S +C+ + CDG+ DC +G DE C + C GQF C G
Sbjct: 3505 DLAHCLPMCSSTQFLCADSERCIPIWWKCDGQRDCRDGSDEPSTCPHRYCPVGQFQCNDG 3564
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
C + C+G DC DG+DE + HQC + Q QC +K+CIP W CD E DC
Sbjct: 3565 NCTSSHYLCNGLSDC-PDGADEDHVLCANHQCESHQWQCD-NKRCIPEAWQCDREDDCG- 3621
Query: 274 DDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DN+DED C GQ +C + +CIP +W CD + DC DN+DE +
Sbjct: 3622 ----DNSDEDSSHCASRTCPPGQFKCD-NGRCIPQSWKCDVDDDCG-----DNSDEPVHE 3671
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + E C ++ +CV L C+G DC + DE
Sbjct: 3672 CMGPSYRCDNHTEFSCRTNYRCVPLWAVCNGHNDCRDNSDE 3712
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 143/360 (39%), Gaps = 61/360 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ RC +++C+ L CDG DC + DE ECT ++ C +CIP W CD
Sbjct: 3725 DFRC-DNHRCIPLRWKCDGDNDCGDESDEQNCSPRECTESEYRCDNLRCIPSRWICDHDN 3783
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----- 283
DC ED SDE + + C G QC S C+ + CD DC +D +DE
Sbjct: 3784 DC-EDNSDERDCELRTCHPGYFQCD-SGHCVAERFRCDGSADC-----LDFSDEAACPTR 3836
Query: 284 -----------------------W-------------DKFHQCFNGQVQCALSKKCIPHN 307
W ++ H C + + +C +
Sbjct: 3837 YPNGTYCPRTMFECKNHVCIQPYWKCDGDDDCGDGSDEELHFCLDIACEPPFRFRCGNNR 3896
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+ E+ DD D +DE + C E +CG+ N C+ L CD DC
Sbjct: 3897 CIYSHELCNQKDDCGDGSDEKEEHCREPTPKPCTTEEFKCGNGN-CIPLHYVCDNYDDCG 3955
Query: 368 NGEDE-GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPN---KTQCVDADECLID 422
+ DE G C C H C+ T G +C C G PN + C D +EC I
Sbjct: 3956 DHFDELGCNSGTGRTCTENICEHNCTNLTEGGFICTCRPGYRPNDLNRNNCEDINECDIF 4015
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+C Q C NT SY C C EG+ D GK C A P ++ V IRR +++
Sbjct: 4016 GTCPQVCQNTKGSYECFCAEGFRSVGDQQGKQCAA----NGNPPILLLPDNVRIRRYNMS 4071
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 110/363 (30%), Positives = 144/363 (39%), Gaps = 91/363 (25%)
Query: 165 CHPN--ELRCGSSNQCVALSKF-------------CDGKPDCSNGEDE------GPFCNA 203
CH N E CGS N A S F CD DC + DE GP
Sbjct: 1047 CHDNSDEQNCGSLNTSCATSAFTCRNGQCIPRRWRCDKHNDCLDNSDELHCPTQGP---T 1103
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHN 262
C F+C GKCIP W CD DC DGSDE N T C GQ QC +CI
Sbjct: 1104 SCPATLFTCDNGKCIPRIWMCDTDNDC-GDGSDEKNCTFTETCEPGQFQCP-DHRCIDPF 1161
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
++CD + DC +D DE D + C + + +CA +CI + + CD DC+
Sbjct: 1162 YVCDGDKDC-----IDGADEH-DCIYNCSSTEFKCASGDQCISNYYQCDGVFDCN----- 1210
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-- 380
D++DE + +CH NE +C S C+ + CDG PDC +G DE C +
Sbjct: 1211 DHSDE--VNCPTRPPGMCHQNEFQCQSDGNCIPANWECDGHPDCVDGSDEHHRCPPRTCP 1268
Query: 381 ----DCENLKCSHKC-----------------SPTPRGAMCFCPAGQN--PNKTQCVD-- 415
C+N C ++ PTP CP+ Q P + CV+
Sbjct: 1269 PTLFRCDNGNCIYRAWVCDGDNDCRDMSDESDCPTPPFR---CPSWQWQCPGHSMCVNLS 1325
Query: 416 ------------ADECLI---------DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
ADE + + C C CSC GY L D K+C
Sbjct: 1326 KVCDNLSDCPNGADESPLCNQETCSDNNAGCTHECIQGPFGAQCSCPFGYQLANDSKTCE 1385
Query: 455 AVN 457
+N
Sbjct: 1386 DIN 1388
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 84/176 (47%), Gaps = 21/176 (11%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P C GQF CG G+CIP W+CDG DC +D +DE C Q QC +C
Sbjct: 21 PVQGQGCESGQFRCGNGRCIPAEWRCDGARDCSDD-TDEAGCPRPTCGGSQFQCLSDGEC 79
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
IP +W+CD+E DC D +DE C + Q C + +CIP + CD DC
Sbjct: 80 IPRSWVCDDEEDCE-----DGSDEHQQCPGRTCSSQQFTCT-NGQCIPGTYRCDRVKDC- 132
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+D TDE +Y + + + C S+ C S+ CDGK DC + DE
Sbjct: 133 ----MDETDERGCQYPTCDQLSC--------SNGACFNASQHCDGKLDCRDASDEA 176
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 111/229 (48%), Gaps = 20/229 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P CG+ +CV+ + CD DC + DE C + +F+C G+CI +
Sbjct: 2737 CQPTAFTCGNG-RCVSYAYRCDHYNDCGDNSDEVGCLFRTCDSNREFTCNNGRCISLEYV 2795
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++G SDE N C +G +C + CIP +LCD + DC D+ D +
Sbjct: 2796 CNGVNNCYDNGTSDERNCPERTCQSGYTKCQSTNICIPRTYLCDGDNDCG--DMSDESPT 2853
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSHNAVL- 339
C + + +C+ S +CIP +W CD+ +DC+ D++DE KY V
Sbjct: 2854 HCVSL-TCTSSEFRCS-SGRCIPAHWYCDQAIDCA-----DSSDEPSSCGKYEVVPPVRS 2906
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C ++ RC +C+ + CDG DC + DE + + C N CS
Sbjct: 2907 CSSDQFRC-DDGRCIPATWICDGDNDCGDMSDE----DQRHSCANRTCS 2950
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 84/181 (46%), Gaps = 37/181 (20%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------K 257
+C FSCG G+C+P ++CDG DC D SDE N C + CA S +
Sbjct: 1021 QCGAYSFSCGNGRCVPRFYQCDGVDDC-HDNSDEQN-----CGSLNTSCATSAFTCRNGQ 1074
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCD 311
CIP W CD+ DC +DN+DE H G C + KCIP W+CD
Sbjct: 1075 CIPRRWRCDKHNDC-----LDNSDE----LHCPTQGPTSCPATLFTCDNGKCIPRIWMCD 1125
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DC D +DE + F+ C P + +C ++C+ CDG DC +G D
Sbjct: 1126 TDNDCG-----DGSDEK-NCTFTET---CEPGQFQC-PDHRCIDPFYVCDGDKDCIDGAD 1175
Query: 372 E 372
E
Sbjct: 1176 E 1176
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 112/241 (46%), Gaps = 38/241 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPES 221
C + +C N C + C+G DC +G DE N +C Q+ C +CIPE+
Sbjct: 3553 YCPVGQFQCNDGN-CTSSHYLCNGLSDCPDGADEDHVLCANHQCESHQWQCDNKRCIPEA 3611
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC ++ ++ + C + C GQ +C + +CIP +W CD + DC DN+
Sbjct: 3612 WQCDREDDCGDNSDEDSSHCASRTCPPGQFKCD-NGRCIPQSWKCDVDDDCG-----DNS 3665
Query: 281 DEDWDKFHQCF--------NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE H+C + + C + +C+P +C+ DC DN+DE
Sbjct: 3666 DE---PVHECMGPSYRCDNHTEFSCRTNYRCVPLWAVCNGHNDCR-----DNSDEQ---- 3713
Query: 333 FSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF--CNNKADCENLK 386
C P + RC +++C+ L CDG DC + DE P ++ C+NL+
Sbjct: 3714 -GCETRTCDPLGDFRC-DNHRCIPLRWKCDGDNDCGDESDEQNCSPRECTESEYRCDNLR 3771
Query: 387 C 387
C
Sbjct: 3772 C 3772
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH NE +C S C+ + CDG PDC +G DE C C P F C G CI +W
Sbjct: 1225 MCHQNEFQCQSDGNCIPANWECDGHPDCVDGSDEHHRCPPRTCPPTLFRCDNGNCIYRAW 1284
Query: 223 KCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC D SDE + T +C + Q QC C+ + +CD DC
Sbjct: 1285 VCDGDNDC-RDMSDESDCPTPPFRCPSWQWQCPGHSMCVNLSKVCDNLSDC 1334
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G+N++ +++ ++WP+ L IDY D LYW D+HLN +E +DG H +
Sbjct: 3347 IGRVGMDGKNKTVIISAKLEWPNGLTIDYTNDKLYWADAHLNYIEYSNLDGQHRHTVYDG 3406
Query: 163 VLCHP 167
L HP
Sbjct: 3407 TLPHP 3411
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 174/485 (35%), Gaps = 117/485 (24%)
Query: 32 STDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVS 78
+ +D + +D D +K+ +GT L N + LCF + +++S
Sbjct: 746 AQEDTIFYSDTTKDIIYKQKTDGTGKEILAANRVEGVEDLCFDWISKNIYWTDPRYRSIS 805
Query: 79 SVRL----RCAQINDLLNSWDLPA----PEIFPLD----ERLEKAGMHGENRSPLVTKNI 126
+RL R A + +L N + IF D ++ +A G + P+V +
Sbjct: 806 VMRLADKSRRAIVQNLNNPRSIVVHPVIGYIFWTDWYRPAKIMRAWSDGSHAMPIVNTTL 865
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL------CHPNEL---------- 170
WP+ L ID++ LYW D+ + +E DG L HP L
Sbjct: 866 GWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLERISQMTHPFGLTIFGGYAYFT 925
Query: 171 --RCGSSNQCVAL----------------------SKFCDGKPDCSNGEDEGPFCNAECT 206
R G + + F G C+ + C+ C
Sbjct: 926 DWRLGGIVRVRKTDGGEMTIIRRGINNIMHVKAYNAHFQTGNNYCNRATNPNGDCSHFCF 985
Query: 207 P---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
P Q CG + S + C+ED S+EP T QC C + +C+P +
Sbjct: 986 PVPNFQRVCGCPYGMKLS---SNQLTCVEDPSNEPPTL--QCGAYSFSCG-NGRCVPRFY 1039
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCS 317
CD DD DN+DE C + CA S +CIP W CD+ DC
Sbjct: 1040 QCD-----GVDDCHDNSDE-----QNCGSLNTSCATSAFTCRNGQCIPRRWRCDKHNDC- 1088
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
+DN+DE + P L + +C+ CD DC +G DE
Sbjct: 1089 ----LDNSDE---LHCPTQGPTSCPATLFTCDNGKCIPRIWMCDTDNDCGDGSDE----- 1136
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+N + C P CP + + D D+ IDG+ + C Y
Sbjct: 1137 -----KNCTFTETCEP----GQFQCPDHRCIDPFYVCDGDKDCIDGADEHDCI-----YN 1182
Query: 438 CSCTE 442
CS TE
Sbjct: 1183 CSSTE 1187
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 126/301 (41%), Gaps = 49/301 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + GENR +++ + +P ++ + ++Q I YW D + ++ + DGS V+
Sbjct: 2569 QKIERSSITGENREVIISTAL-YPFAMTL-FDQHI-YWTDWNTRSIYRANKYDGSDQIVM 2625
Query: 165 C-----HPNELRCGSSN---QCV--------ALSKFCDGKPDCSNGE--DEGPFCNA--- 203
P ++ S + QC S C P + + EG + A
Sbjct: 2626 ISSLPTRPMDIHVWSKSKQRQCTNPCNQFNGGCSHICVSGPTGAECQCPSEGHWYLANNN 2685
Query: 204 ---------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C G F+C G+CI E WKCD DC +D + + C H C C
Sbjct: 2686 KHCVMDNGTRCAGGFFTCLNGRCISERWKCDNDNDCGDDSDELESVCAFHTCQPTAFTCG 2745
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +C+ + + CD DC DN+DE F C + + + +CI ++C+
Sbjct: 2746 -NGRCVSYAYRCDHYNDCG-----DNSDEVGCLFRTCDSNREFTCNNGRCISLEYVCNGV 2799
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+C + D + C +C S+N C+ + CDG DC + DE
Sbjct: 2800 NNCYDNGTSDERN--------CPERTCQSGYTKCQSTNICIPRTYLCDGDNDCGDMSDES 2851
Query: 374 P 374
P
Sbjct: 2852 P 2852
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++++ WP+ L IDY N D +YW D N VES++ DG+ +
Sbjct: 4210 KIESAWMDGQQRQILVSEDLGWPTGLSIDYLNGDRIYWSDQKENLVESMKFDGTDRKTIL 4269
Query: 166 H 166
H
Sbjct: 4270 H 4270
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR LV + WP+ + +D LYW DS + +E+V DG +
Sbjct: 531 DPKVERAFMDGTNRLDLVKTKLGWPAGITLDIVSKRLYWVDSRFDYIETVTYDGLQRRTI 590
Query: 165 CHPNEL 170
H L
Sbjct: 591 AHGGSL 596
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G R+ +++ N+ WP+ L +DY LYW D+ L +E + G + V+
Sbjct: 2527 KIERATLGGNFRTAIISTNLVWPNGLTLDYEDQQLYWADASLQKIERSSITGENREVI 2584
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V+ I WP+ L IDY +LY+ D++L+ ++ +G +
Sbjct: 1574 RIERASMDGTLRTTIVSSKIYWPNGLSIDYPNKLLYFADAYLDYIDFCDYNGNNRRQVVA 1633
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1634 SDLVLRHPHAL 1644
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 21/139 (15%)
Query: 47 YFKRI------LNGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLL-NSWDLP 97
YF+ + LNG +A+++ N F+ + + +RL LL + D+P
Sbjct: 2129 YFRNVITSGIGLNGIRGIAIDWVADNLYFTNAFVAETFIEVLRLNTTYRRVLLKTTIDMP 2188
Query: 98 APEI------------FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD 145
+ + + ++E+A + NR+ LV++ I P L ID++ +YW D
Sbjct: 2189 RHIVVDPKNRYLFWADYGQNPKIERALLDCSNRTVLVSEGIVTPRGLAIDHSTGYVYWVD 2248
Query: 146 SHLNTVESVRVDGSHNAVL 164
L+ + + DG ++
Sbjct: 2249 DSLDMIARISHDGGEPEII 2267
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 12/119 (10%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQI-----NDLLNSWDLPAPEIFPLD---ERLE 109
L L RNQ I N++S R + N + +D IF D +++
Sbjct: 1432 LLLLVASRNQ----IVADNITSHAQRIYSLVRDGRNIVAIDFDSVTERIFWSDITQDKIW 1487
Query: 110 KAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + + S+ +D+ LYW D L T+E R+DG+H VL N
Sbjct: 1488 SAYQNGTDRKVVFDSGVTVTESIAVDWIGRNLYWTDYVLETIEVSRLDGTHRTVLISEN 1546
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q + C + G CDQ C +H
Sbjct: 624 NKFADSNPQVIYQSSLRPYGVTIYHALRQPYVRNPCSGNN-----GGCDQICVLSHRTDN 678
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 679 DGLGYRCKCMLGFDLHADGRRCVAVQ------QFLLFSSQLAVRGIPFNLS 723
>gi|355564952|gb|EHH21441.1| hypothetical protein EGK_04507 [Macaca mulatta]
Length = 4655
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 160/329 (48%), Gaps = 37/329 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C +++ C S+ QC+ CD DC +G DE P C Q +C G C
Sbjct: 108 CSSHQITC-SNGQCIPGEYRCDHVRDCPDGADENDCRIPTCE------QLTCDNGACYNT 160
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S KCD VDC D SDE N C C + + C S +CIPH ++CD + DC D +
Sbjct: 161 SQKCDWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPHAYVCDHDSDCQ-----DGS 212
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C Q C S +CI NW+CD E DC DN DED + SH C
Sbjct: 213 DEHACNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSSHGVHKC 266
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
P E C S +C+++ K CDG DC EDE G +C+ C L C ++C TP
Sbjct: 267 SPREWSCPESGRCISIYKVCDGILDCPGREDENSTTTGKYCSTTL-CSALNCQYQCHETP 325
Query: 396 RGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+
Sbjct: 326 YGGACFCPPGYTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILE-RGQH 384
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C A + + ASIIFS+ D+ ++G
Sbjct: 385 CKANDSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/309 (37%), Positives = 144/309 (46%), Gaps = 41/309 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESW 222
+C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI +
Sbjct: 1148 ICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCISVTN 1205
Query: 223 KCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+CDG DC D SDE P C + + QC CIP+ W CD DC +
Sbjct: 1206 RCDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYG 1259
Query: 280 TDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+DE + C NG CI WLCD + DC D +DE K
Sbjct: 1260 SDEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---K 1303
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHK 390
C + +C N CV LS CDG DC NG DE P CN N N C+H+
Sbjct: 1304 DCPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHE 1363
Query: 391 CSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C P GA C CP G N +KT C D DEC I GSC Q C N S+ C+C GY L
Sbjct: 1364 CVQEPFGAKCLCPLGFLLANDSKT-CEDIDECDIPGSCSQHCYNMRGSFRCACDTGYMLE 1422
Query: 448 PDGKSCTAV 456
DG++C
Sbjct: 1423 SDGRTCKVT 1431
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 164/412 (39%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTTCQNSNICIPRIYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD +DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQEIDCF-DASDEPASCGHPERTCLADEFKCDRG-RCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPEIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDSGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC C Q C
Sbjct: 3108 GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTETPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 143/365 (39%), Gaps = 62/365 (16%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + DC D SDE + + C QC S C+P CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVPSELKCDGTADC-----LDASDEA 3830
Query: 284 ----------------------------W-------------DKFHQCFNGQVQCALSKK 302
W ++ H C N +
Sbjct: 3831 DCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLNVPCNSPNRFR 3890
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C + + E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3891 CDNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPNDNVCDD 3949
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDAD 417
DC + DE G + C C C+ G +C C AG N +T C+D +
Sbjct: 3950 ADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDIN 4009
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIR 475
EC G+C Q C NT SY C C +G+T D GK C A + ++ V IR
Sbjct: 4010 ECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAA----EGSSPLLLLPDNVRIR 4065
Query: 476 RIHLN 480
+ +L+
Sbjct: 4066 KYNLS 4070
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QC +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 153/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HRRHTVYDGSLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QC +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPSYYRCDGVNDCHDNSDEQLCGTLNNTCSSSAFTCGNGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTEIC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++ CDG DCS+ DE
Sbjct: 1197 GDKCISVTNRCDGVFDCSDNSDEA 1220
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 115/273 (42%), Gaps = 71/273 (26%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RCG+S+ +C++ CD DC +G DE A C+P F+C G+C+
Sbjct: 2696 NGERCGASSFTCSNGRCISKEWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCANGRCVQ 2755
Query: 220 ESWKCDGFVDCLEDGSDEP-----------------NTCI-------------------- 242
S++CD + DC DGSDE CI
Sbjct: 2756 YSYRCDYYNDC-GDGSDEAGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNTSDE 2814
Query: 243 -----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQV 295
C +G C S CIP +LCD + DC DN+DE+ + H C + +
Sbjct: 2815 KNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCG-----DNSDENPTYCTTHTCSSSEF 2869
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC S +CIP +W CD+E+DC D +DE H C +E +C +C+
Sbjct: 2870 QCT-SGRCIPQHWYCDQEIDC-----FDASDE--PASCGHPERTCLADEFKC-DRGRCIP 2920
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + C+N CS
Sbjct: 2921 SEWICDGDNDCGDMSDE----DERHQCQNQNCS 2949
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-TNKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVPS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGTADCLDASDEA 3830
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 103/219 (47%), Gaps = 25/219 (11%)
Query: 177 QCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
+C+ C+G +C +N DE + C G +C CIP + CDG DC ++
Sbjct: 2792 RCIPREFVCNGVDNCHDNNTSDEKNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCGDN 2851
Query: 234 GSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---Q 289
+ P C H C + + QC S +CIP +W CD+E+DC D +DE H
Sbjct: 2852 SDENPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQEIDC-----FDASDEPASCGHPERT 2905
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + +C +CIP W+CD + DC D +DED +++ N C +E C +
Sbjct: 2906 CLADEFKCDRG-RCIPSEWICDGDNDCG-----DMSDED-ERHQCQNQN-CSDSEFLCVN 2957
Query: 350 ----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+C+ S CDG DC++G DE C + EN
Sbjct: 2958 DRPPDRRCIPQSWVCDGDVDCTDGYDENQNCTRRTCSEN 2996
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 87/174 (50%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C + +CIP
Sbjct: 1025 QCGIFSFPCKNGRCVPSYYRCDGVNDC-HDNSDEQLCGTLNNTCSSSAFTCG-NGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ +C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTEICQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSEHFRCGSGHCIPADWRCDGTKDCSDD-TDEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE CS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDEHQGCSQS--------------TCSSHQITCS-NGQCIPGEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ + + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCRIPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ +DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPHAYVCDHDSDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D +++H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSSHGVHKCSPRE 270
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGSG-ECIPHAYVCDHDSDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + + +H+C + C S +CI +CD +DC
Sbjct: 241 CDGEDDCKDNGDEDGCESSSHGVHKCSPREWSCPESGRCISIYKVCDGILDC 292
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 44/280 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V
Sbjct: 2528 MHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKIERSTLTGMDREV 2587
Query: 164 LCHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-E 220
+ + G + Q + + + +N D G+ + +
Sbjct: 2588 IVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQ 2647
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCST 273
+C+ + G C H C G + QC PH NW L + C
Sbjct: 2648 KEQCNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC-- 2692
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
IVDN + C NG +CI W CD + DC D +DE
Sbjct: 2693 --IVDNGERCGASSFTCSNG--------RCISKEWKCDNDNDCG-----DGSDEMESVCA 2737
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H C P C ++ +CV S CD DC +G DE
Sbjct: 2738 LHT---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P+V + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHLCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P + CD DC
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGIFSFPCKNG--------RCVPSYYRCDGVNDCH- 1052
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ C + CG+ +C+ CD + DC +G DE
Sbjct: 1053 ----DNSDEQLCGTLNNT---CSSSAFTCGNG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVTSDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFAETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|3386583|gb|AAC28497.1| putative vitellogenin receptor [Aedes aegypti]
gi|13273500|gb|AAK15810.1| vitellogenin receptor [Aedes aegypti]
Length = 1847
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 182/393 (46%), Gaps = 67/393 (17%)
Query: 144 CDSHLN---TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--- 197
CD H++ + ++ +G CH ++ C C+ ++ CDG PDC +G DE
Sbjct: 1018 CDEHVDCGDGSDEMKCEGYDRGTGCHEHQHAC-PDGMCIDVNTLCDGFPDCLDGSDEVGC 1076
Query: 198 ----GPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQV 250
NA C P F C MG+CIP+ W+CDG DC DGSDE + C+ + C G
Sbjct: 1077 TDLTNEKSNATTCGPLMFRCNMGQCIPKWWECDGNPDC-TDGSDEHDKCLTKTDCGAGFT 1135
Query: 251 QCALSKKCIPHNWLCDEEMDCS--TDDI---------VDNTDEDWDKF-----HQCFNGQ 294
+CAL CI LCD DC +D++ V D++ K+ +C +
Sbjct: 1136 KCALGH-CIEDRLLCDGNNDCGDNSDELNCKVELEPCVGLEDDNPTKYLCPRSGKCLDIA 1194
Query: 295 VQCA------------------------LSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDW 329
V+C S KCI W CD+E+DC D VD +
Sbjct: 1195 VRCNGTAECPDGEDEAGCSNCGLQEFQCKSGKCIRKEWRCDKEVDCDDGSDEVDCVNGTA 1254
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
++ + V C C C+ +S+ C+GK DC +G+DEG C++ C C H
Sbjct: 1255 AEHLEVH-VACGEGTFEC-KPGVCIEMSQVCNGKKDCDDGKDEGKGCDDA--CAKSPCEH 1310
Query: 390 KCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
KC TP GA+C C G PNK C+D DEC C Q C NT SY CSC G+ LR
Sbjct: 1311 KCIKTPTGAICECREGFTLAPNKKSCLDVDECAEGRPCAQQCRNTFGSYRCSCNPGFMLR 1370
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D SC AV + ++++S IR++ +N
Sbjct: 1371 SDKISCKAVGPSR----YVLYTSYNQIRKLEVN 1399
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 156/338 (46%), Gaps = 45/338 (13%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGK-CI 218
A C NE RC + C+ C+G DC++G DE C P + C K CI
Sbjct: 41 KAPACAENEYRC-DNGACIPDVNHCNGAKDCTDGSDEVGCDYFLCKKPMWYRCKHDKSCI 99
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCS 272
++ CD DC G DE N + + V C+ K CIP + +CD C
Sbjct: 100 SATFLCDKHDDC-PLGDDEENCENFEVPHVPVPCSKFEFTCTDKMCIPLDLVCDGVSHC- 157
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCA----LSKKCI-PHNWLCDEEMDCSTDDIVDNTDE 327
+D +DE C + + +C +K+CI H+W+CD DD D +DE
Sbjct: 158 ----LDGSDETIG----CKDIENKCKGFVCKNKRCINSHDWVCD-----GIDDCGDGSDE 204
Query: 328 DWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ N + + C ++ CV L CDGK DC + DEG CN+K +C++
Sbjct: 205 E-------NCFIGCDLEHGKFECADNSTCVDLKLVCDGKDDCGDHSDEGGSCNSK-ECDS 256
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
++C C TP GA+C C G NK C D +EC G C Q C NT S+ C+C +
Sbjct: 257 MRCPEGCKATPHGAVCLCKPGFRFNKKSKVCEDINECERYGLCSQGCENTPGSFKCTCVD 316
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ L+ D ++C + EP +++++ I +HLN
Sbjct: 317 KFKLKDDSRTCELDD--STEPL-LLYTTQKSIGGLHLN 351
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 90/223 (40%), Gaps = 58/223 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--------GKCIPE 220
E +C +S +C+ +SK C+G DC++G DE C+ P Q C KCI +
Sbjct: 957 EFKC-TSGECLTISKRCNGNKDCADGSDEKG-CDEAGQPKQLHCQYDEFMCADKSKCIDQ 1014
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ +CD VDC DGSD EM C
Sbjct: 1015 TRRCDEHVDC-GDGSD-------------------------------EMKC--------- 1033
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDKYFSHNAVL 339
E +D+ C Q C CI N LCD DC D V TD +K NA
Sbjct: 1034 -EGYDRGTGCHEHQHACP-DGMCIDVNTLCDGFPDCLDGSDEVGCTDLTNEK---SNATT 1088
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
C P RC + QC+ CDG PDC++G DE C K DC
Sbjct: 1089 CGPLMFRC-NMGQCIPKWWECDGNPDCTDGSDEHDKCLTKTDC 1130
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA----- 162
+ AGM G+N+ L+ ++I WP+ L +D+ LYW D+ L +ES+RVDG++
Sbjct: 474 IGAAGMDGKNKRILIEQDIHWPNGLCLDWPNGRLYWVDAKLKKIESIRVDGTNRVTVLAD 533
Query: 163 VLCHP 167
VL HP
Sbjct: 534 VLKHP 538
>gi|328778687|ref|XP_624737.2| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Apis mellifera]
Length = 4546
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 128/380 (33%), Positives = 161/380 (42%), Gaps = 96/380 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN+ +C S +CV +S CD + DC + DE N CT QF+C +CIP +WKC
Sbjct: 1073 CAPNQFQC-KSGRCVPMSFLCDSENDCGDYSDEASCPNVTCTANQFACANNRCIPNTWKC 1131
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD---------EEMDC--- 271
D DC D SDE + C+ + C Q C S CIP +W+CD +EMDC
Sbjct: 1132 DSENDC-GDSSDEGDFCVAKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDEMDCPPV 1190
Query: 272 -----------------------STDDIVDNTDE---DWDKFHQC-FNGQVQCALSKKCI 304
D D +DE QC + Q QCA S CI
Sbjct: 1191 TCLSTQFTCADQKMCVLDSYKCDGISDCNDGSDEVGCPSLAPDQCNTDKQFQCASSAICI 1250
Query: 305 PHNWLCDEEMDC-----------------------------------STDDIVDNTDEDW 329
P +W CD DC DD D +DED
Sbjct: 1251 PRSWYCDGTPDCPDRSDEPASCGQVGCQPGFFKCRNEKCVFKAYICDGKDDCGDGSDEDT 1310
Query: 330 DKYFSHNAVLCHPNELRCGS--------SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ + C E +C S +N CV ++ CD K DC NG DEGP CN + +
Sbjct: 1311 ELH------ACTAPEFKCDSQQWKCPNVTNICVNITSVCDNKFDCPNGADEGPACNFQ-E 1363
Query: 382 CENLK--CSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYV 437
CE CS+ C TP G C CP+G+ NK C D +EC G C Q C N Y
Sbjct: 1364 CEYRGGYCSNDCIETPLGKQCTCPSGEELNKDGYTCEDLNECEPPGRCSQICVNIKRGYY 1423
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C+C EGYTL D +C A N
Sbjct: 1424 CNCVEGYTLEKDKHTCKAFN 1443
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 160/336 (47%), Gaps = 45/336 (13%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG----SSNQCVALSKF 184
P++LV +Y +D C+S + +S C ++ CG + C+ +
Sbjct: 72 PATLVCNYQKD----CESAEDEFQSC------TPPDCEAGQITCGQYIFNKTYCIPPHQR 121
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---CIPESWKCDGFVDCLEDGSDEP--- 238
CD DC +G DE +C P F CG CIP+ KCDG++DC +G DE
Sbjct: 122 CDMTVDCVDGTDEAGCNYRKCQPDDFRCGGSTPELCIPKEKKCDGYLDC-RNGRDEEKCE 180
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
N C Q +C +++CI + C+ + DC DN+DE+ F QC Q +CA
Sbjct: 181 NNSKPACRLDQFRCNSTQRCIEQSARCNYKDDCG-----DNSDEENCNFQQCTMDQFRCA 235
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-----C 353
S CIP +++CD DC D +DE S C N+ C C
Sbjct: 236 NSL-CIPRSYVCDGYKDCH-----DGSDEK-----SCTTTSCPQNKFVCPRGTTDGKPLC 284
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT 411
+ S+ CDGK DC + DE C++ C +L C +KC +P G +C+CPAG + T
Sbjct: 285 IDRSQICDGKTDCEDKADEEATCSS-VICTSLACRYKCRASPTGGVCYCPAGWILANDST 343
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C+D DEC G C+Q C NT SY CSC G+ L+
Sbjct: 344 TCIDRDECSEWGFCEQLCKNTEGSYTCSCAPGFILQ 379
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 111/378 (29%), Positives = 157/378 (41%), Gaps = 75/378 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2809 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQSSFRCPNHRCIPATW 2868
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +D
Sbjct: 2869 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDY 2922
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDC------------ 316
+DED + HQC + + C +K +CIP WLCD + DC
Sbjct: 2923 SDED--ERHQCNDRKCDEETEFTCTANKVWHRAQCIPKKWLCDGDPDCVDGADENVTLHH 2980
Query: 317 -------------------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
DD D++DED N +P E C ++
Sbjct: 2981 XXXXXXXXXFTCHNFKCIRKQFHCDGQDDCGDHSDEDGCPPKMKNMTCSNPKEFMC-ANG 3039
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCENLKCSHKCSPTPRGAMCFCPAGQN-- 407
C+ C+ +PDC++ DE CN A E +C+HKC TP C C G
Sbjct: 3040 ICIDQQLVCNKEPDCADESDEPAHCNVDECAMVEMNQCAHKCIDTPTSYYCECNPGYRLL 3099
Query: 408 PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVN--VPQDEP 463
+ C D DEC+ C Q C NT S+ C C + R D +C + +P
Sbjct: 3100 ADGKACEDIDECVETPQVCSQQCQNTPGSFYCKCNHYWYERAADEHTCKRRDNIIPW--- 3156
Query: 464 ASIIFSSTVDIRRIHLNG 481
IIF++ +R + ++
Sbjct: 3157 --IIFTNKYYVRNMSIDA 3172
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C++ + CDG+ DC + DE C P QF C G+C+P S+ CD DC D
Sbjct: 1042 ANQRCISHAWVCDGENDCLDNSDERNCTKPTCAPNQFQCKSGRCVPMSFLCDSENDC-GD 1100
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN 292
SDE + C Q CA + +CIP+ W CD E DC D++DE D+ C
Sbjct: 1101 YSDEASCPNVTCTANQFACA-NNRCIPNTWKCDSENDCG-----DSSDEGDFCVAKTCSY 1154
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1155 FQFTCPRSGHCIPRSWVCDGDNDC-----FDQQDE-----MDCPPVTCLSTQFTCADQKM 1204
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1205 CVLDSYKCDGISDCNDGSDE 1224
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 135/306 (44%), Gaps = 30/306 (9%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSHNA 162
+ E++E++ + G NR LV+ I +P ++ + ++ +YW D L V + + G++
Sbjct: 2576 VREKIERSELDGSNRQILVSATI-YPFAITV--FREHIYWTDLQLRGVYRAEKHTGANKV 2632
Query: 163 VLCHPNELRCGSSNQCVALSKF--CDGKPDC-----SNGEDEGPFC---NAECTPGQFSC 212
L E +G +C S +E C N C +F+C
Sbjct: 2633 ELVKRLEXXXXXXXXXXXXXXXXXINGSAECKCDDNSRLVNEDRMCVPKNVTCDSSKFAC 2692
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G+CI W CDG DC + ++ N C H C + +C + +CI W CD E DC
Sbjct: 2693 RNGRCISRMWACDGDDDCGDGSDEDTNYCSYHSCSPNEFRCN-NGRCIFKTWKCDHENDC 2751
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE+ + C G+ CA + +CIP + +C+ DC + D T E +
Sbjct: 2752 R-----DGSDEEGCVYPPCAAGEFTCA-NYRCIPQSQVCNGINDCKDNVTSDETHERCPR 2805
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC-S 388
C PN L+C +N CV CDG DC + DE P + C + +C +
Sbjct: 2806 -----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQSSFRCPN 2860
Query: 389 HKCSPT 394
H+C P
Sbjct: 2861 HRCIPA 2866
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFS 211
+ D +H ++ C E +C S+ +C+ S CDG DC +G DE P N C P +F+
Sbjct: 3543 KSDEAHCSLECGELEFKCKSNGRCIHESWKCDGDADCKDGSDEDPAICHNRPCDPNTEFT 3602
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDE 267
C +CI + W CD DC +D SDEP Q C G +C + +CIP CD
Sbjct: 3603 CKNNRCIQKVWMCDSDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDG 3661
Query: 268 EMDC--STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC +D++ +N + D + +C N +C+P WLCD DC D
Sbjct: 3662 KDDCRDGSDELAENCPKCDPEMDFKCTN--------NRCVPKQWLCDFADDCG-----DG 3708
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE + + C +E RC + +C+A CD + DC + DE
Sbjct: 3709 SDEA-ETMCKNRYRECSESEFRC-DNGKCIASRWRCDSEDDCGDNSDE 3754
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 142/329 (43%), Gaps = 38/329 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+A CD + DC + DE C F C G CI +C
Sbjct: 3723 CSESEFRC-DNGKCIASRWRCDSEDDCGDNSDENGCQEFVCKNDTFQCASGHCIASYLRC 3781
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE C + QC + C+ + +CD DC D
Sbjct: 3782 DGTRDC-RDMSDEIGCPPRYPGGRYCPQSRFQCD-NNLCVYLSDICDGSDDCG-----DG 3834
Query: 280 TDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+DE+ + F + QCA + KCI LCD D+ D +DE+ +
Sbjct: 3835 SDENTNMCANFKCDTTRRFQCA-NHKCIAKYQLCD-----GIDNCGDGSDENNMTMCASR 3888
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA--DCENLKCSHKC-SP 393
C ++ +C+ +K CD DC + DE +NK D CSH C +
Sbjct: 3889 VRPCDAITEYTCANKKCIERTKLCDFADDCGDSSDELGCHHNKPCLDSNKGGCSHYCHNI 3948
Query: 394 TPRGAMCFCPAG----QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRP 448
T G +C C G QN N+ C D +EC+ C Q CTN + +Y CSC +G+ L
Sbjct: 3949 TEGGYICACYPGYIISQN-NRKHCEDINECVTGQHQCSQLCTNLNGTYSCSCRQGFELS- 4006
Query: 449 DGKS--CTAVNVPQDEPASIIFSSTVDIR 475
D +S C AV D I+F++ IR
Sbjct: 4007 DNRSGVCRAV----DTNMMILFANGPGIR 4031
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 146/397 (36%), Gaps = 117/397 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP+S C
Sbjct: 2726 CSPNEFRC-NNGRCIFKTWKCDHENDCRDGSDEEGCVYPPCAAGEFTCANYRCIPQSQVC 2784
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2785 NGINDCKDNVTSDETHERCPRNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2839
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2840 DENPLHCAQRTCPQSSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2899
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +D +DED +++ ++ E C ++
Sbjct: 2900 TCD-NGNCIPRIYICDGDNDC-----LDYSDED-ERHQCNDRKCDEETEFTCTANKVWHR 2952
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNNKA--------DCENLKCSHK------------ 390
QC+ CDG PDC +G DE ++ C N KC K
Sbjct: 2953 AQCIPKKWLCDGDPDCVDGADENVTLHHXXXXXXXXXFTCHNFKCIRKQFHCDGQDDCGD 3012
Query: 391 ------CSPTPRGAMCFCPAGQNPNKTQCVD----------------------ADECLI- 421
C P + C P C+D DEC +
Sbjct: 3013 HSDEDGCPPKMKNMTCSNPKEFMCANGICIDQQLVCNKEPDCADESDEPAHCNVDECAMV 3072
Query: 422 -DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C +T SY C C GY L DGK+C ++
Sbjct: 3073 EMNQCAHKCIDTPTSYYCECNPGYRLLADGKACEDID 3109
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 131/328 (39%), Gaps = 62/328 (18%)
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
IF D L+ A + G NR +++ P I D ++W D +L +
Sbjct: 3327 RIFWADAHLDYIAFADLEGHNRRKVLS-GTAVPHVFAITIFDDFIFWTDWNLKAISRAEK 3385
Query: 157 DGSHNAVLC-------------HP----------NELRCGSSNQCV----ALSKFCDG-- 187
+N + HP NE G S+ C+ A S +G
Sbjct: 3386 FSGYNLRVLRNTTHRPYDIHAYHPLRQLPYNNPCNENNGGCSHLCLISPPASSYLLEGYG 3445
Query: 188 -------KPDCSNG---EDEGPFCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGS 235
K C N + +G C A CT GQ CG KCIP WKCDG DC +DGS
Sbjct: 3446 QPGVTSYKCKCPNQFVLDKDGKTCTANCTAGQHKCGPPDEKCIPWYWKCDGEKDC-KDGS 3504
Query: 236 DEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
DEP +C C QCA + C P +CD DC D +DE +C +
Sbjct: 3505 DEPISCPARVCRPSVFQCA-NGNCRPSVAVCDGADDCG-----DKSDEAHCSL-ECGELE 3557
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + +CI +W CD + DC D +DE D HN C PN +N+C+
Sbjct: 3558 FKCKSNGRCIHESWKCDGDADCK-----DGSDE--DPAICHNRP-CDPNTEFTCKNNRCI 3609
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADC 382
CD DC + DE + + +C
Sbjct: 3610 QKVWMCDSDNDCGDDSDEPAYMCRQRNC 3637
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 80/164 (48%), Gaps = 19/164 (11%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CI +W CDG DCL D SDE N C Q QC S +C+P ++LCD E
Sbjct: 1039 FTCANQRCISHAWVCDGENDCL-DNSDERNCTKPTCAPNQFQCK-SGRCVPMSFLCDSEN 1096
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-D 328
DC D +DE C Q CA + +CIP+ W CD E DC D++DE D
Sbjct: 1097 DCG-----DYSDEASCPNVTCTANQFACA-NNRCIPNTWKCDSENDCG-----DSSDEGD 1145
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ A C + C S C+ S CDG DC + +DE
Sbjct: 1146 F-----CVAKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDE 1184
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 110/303 (36%), Gaps = 69/303 (22%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCAL----SKKCI 259
C F C G CIP + C+ DC E DE +C C GQ+ C CI
Sbjct: 58 CGVNSFRCLDGTCIPATLVCNYQKDC-ESAEDEFQSCTPPDCEAGQITCGQYIFNKTYCI 116
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS--KKCIPHNWLCDEEMDCS 317
P + CD +DC VD TDE + +C +C S + CIP CD +DC
Sbjct: 117 PPHQRCDMTVDC-----VDGTDEAGCNYRKCQPDDFRCGGSTPELCIPKEKKCDGYLDC- 170
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----- 372
D +K +++ C ++ RC S+ +C+ S C+ K DC + DE
Sbjct: 171 ------RNGRDEEKCENNSKPACRLDQFRCNSTQRCIEQSARCNYKDDCGDNSDEENCNF 224
Query: 373 ------------------GPFCNNKADCENLKCSHKCSPT--PRGAMCFCPAGQNPNKTQ 412
C+ DC + C+ T P+ CP G K
Sbjct: 225 QQCTMDQFRCANSLCIPRSYVCDGYKDCHDGSDEKSCTTTSCPQNKF-VCPRGTTDGKPL 283
Query: 413 CVDADECLIDG----------------------SCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C+D + + DG +C C + VC C G+ L D
Sbjct: 284 CIDRSQ-ICDGKTDCEDKADEEATCSSVICTSLACRYKCRASPTGGVCYCPAGWILANDS 342
Query: 451 KSC 453
+C
Sbjct: 343 TTC 345
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV+ I P +L IDY+ Q +LYW DS LNT+ES+ DGS+ ++
Sbjct: 4172 KIEIAWMDGDRRKQLVSDRIGQPIALTIDYSMQHVLYWADSKLNTIESIEQDGSNRKIIL 4231
Query: 166 HPNELR 171
+ L+
Sbjct: 4232 KGDSLK 4237
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 96/232 (41%), Gaps = 50/232 (21%)
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF-----NGQVQCAL----SKKCI 304
L CIP +C+ + DC + + D+F C GQ+ C CI
Sbjct: 66 LDGTCIPATLVCNYQKDCESAE---------DEFQSCTPPDCEAGQITCGQYIFNKTYCI 116
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ--CVALSKFCDG 362
P + CD +DC VD TDE Y C P++ RCG S C+ K CDG
Sbjct: 117 PPHQRCDMTVDC-----VDGTDEAGCNYRK-----CQPDDFRCGGSTPELCIPKEKKCDG 166
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR----GAMCFCP--AGQNPNKTQCVDA 416
DC NG DE NN L +C+ T R A C G N ++ C +
Sbjct: 167 YLDCRNGRDEEKCENNSKPACRLD-QFRCNSTQRCIEQSARCNYKDDCGDNSDEENC-NF 224
Query: 417 DECLIDGSCDQTCTNT---HLSYVCSCTEGYTLRPDG---KSCTAVNVPQDE 462
+C +D C N+ SYVC +GY DG KSCT + PQ++
Sbjct: 225 QQCTMD---QFRCANSLCIPRSYVC---DGYKDCHDGSDEKSCTTTSCPQNK 270
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS ++ I WP+ L +D +Y+ DS L+ +++ DGS
Sbjct: 1586 RIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKLDFIDTCLYDGSKRIQVLA 1645
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1646 SSHYLLHPHSL 1656
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 53 NGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
+ H E N N+ + ++ + SW L A + K G
Sbjct: 3246 HAKHLDVAELNGTNRKTLLTGIADPRAIVVHPGTGYLYFTSWHLQA--------YIGKMG 3297
Query: 113 MHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
M G N + ++T +I WP++L IDY D ++W D+HL+ + ++G HN
Sbjct: 3298 MDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEG-HN 3347
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ K M G + ++ K++ PS L IDY +LYW D+ +E +DGS+
Sbjct: 2531 FGTSGKIFKTTMAGSLKKAVIDKDLSQPSGLAIDYEDRMLYWTDAVREKIERSELDGSNR 2590
Query: 162 AVL 164
+L
Sbjct: 2591 QIL 2593
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 27 EEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLR 83
E + S ++ V+ DW + Y+ GT + N + + ++ +
Sbjct: 772 EVVLASQNEGVEGLAVDWVAKNLYYIDSRKGTLNVLSTRNVTYRRTLLKNLKRPRAIVIH 831
Query: 84 CAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
Q + WD PA + +A G N ++ WP+ L ID+ +D LYW
Sbjct: 832 PNQGYIFFSEWDRPA--------NISRAYTDGSNLIVFKNLSLGWPNGLAIDFAKDRLYW 883
Query: 144 CDSHLNTVESVRVDGS 159
CD+ L+ V+ ++G+
Sbjct: 884 CDALLDHVQHSNLNGT 899
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL KA + G N P+VT I P + ID +YW DS +T++ V G + ++
Sbjct: 2222 RLGKAYLDGSNWMPIVTSGISTPRDITIDPITHDVYWVDSKQDTIQKVSYTGGNRQII 2279
>gi|442622884|ref|NP_788284.2| LDL receptor protein 1, isoform E [Drosophila melanogaster]
gi|440214197|gb|AAF59114.4| LDL receptor protein 1, isoform E [Drosophila melanogaster]
Length = 4725
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 127/229 (55%), Gaps = 19/229 (8%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP W CD + DC D +DE + +C GQ +C +S+ CIP+NWLCD E DC
Sbjct: 73 CIPMRWKCDSKADCP-----DMSDEGSECAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCG 127
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DI D + + + C E +C + + C+ LS+FCDG+ DC N E + C+
Sbjct: 128 KGDISDELNCP-----NGDTPKCRAFEGQCRNGD-CLELSRFCDGRWDCDNDELQ---CD 178
Query: 378 NK-ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTH 433
+ A C L CS C TP+GA C+CP Q P N T+CVD DEC G+CDQ C NT
Sbjct: 179 KQNAACAALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRNTP 238
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY CSC GY + G C A+NVP EP ++IF S ++ + NG+
Sbjct: 239 GSYECSCVSGYA-KTKGNRCRAINVPPTEPTTLIFLSRDGVQSVGTNGT 286
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 161/379 (42%), Gaps = 71/379 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
+H ++ C P + RC S N C+A S CDG+ DC +G DE C EC QF+C C
Sbjct: 2772 ANHTSLSCDPGQFRCASGN-CIAGSWHCDGEKDCPDGSDE-INCRTECRHNQFACDK-TC 2828
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP SW+CDG DC EDGSDE C ++ C QC S +CIP W+CD E DC + +
Sbjct: 2829 IPASWQCDGKSDC-EDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GL 2886
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDE 327
D E D+ QC S CI +++CD + DC DD +
Sbjct: 2887 GDEGSE--DEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVP 2944
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------- 374
+ + L H + C+ ++ CDGKPDC +G DE
Sbjct: 2945 AFQPHSCPGGSLMHQCQ-----DGLCIFKNQTCDGKPDCGDGSDETSSLCAHTRGCNGTD 2999
Query: 375 --------------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAG 405
C+ + DC + C H+C G C C G
Sbjct: 3000 DFRCKNGACIHADLLCDRRNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPG 3059
Query: 406 QN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
+ C D DEC C QTC NT+ SY C C +GY L D +C A + +
Sbjct: 3060 YKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATS---NV 3115
Query: 463 PASIIFSSTVDIRRIHLNG 481
+IFS+ IR++ + G
Sbjct: 3116 SMELIFSNRYYIRQVDMTG 3134
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIP 219
C+ NE C S +C+ L+ DG DC +D E F ++C +F C G+C
Sbjct: 1032 CNSNEFTCHKSGRCIQLTWVNDGVVDCGPDDDSDETSETIFA-SKCP--EFDCNNGRCRQ 1088
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMD 270
+ CDG +C + +DE C +C +G+ C C +CD +E +
Sbjct: 1089 FADVCDGIDNC-GNNADEME-CEQECEHGEKYCR-PIGCYGEMHMCDGIHDCLDFSDEAN 1145
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--- 327
C+ ++ +W + +C + C +CIP CD C D TDE
Sbjct: 1146 CNQTKSDNHPVTEWKELGECAPLEFACMFPFECIPDFLRCDGISHC-----FDKTDEFNC 1200
Query: 328 ---DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ ++ + V+C HP+ L CG S QCV + + CDGK DC + DEG C +K
Sbjct: 1201 THINTTRFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDR 1259
Query: 384 NLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
+CSH+C TP G +C CP PN +C C +C Q C ++ Y C C
Sbjct: 1260 GHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCL 1319
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+G+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1320 DGFDLGFDRFTCKS--TAPDEPY-VIFTNRQDIKGINL 1354
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ CG+S C+ CDG PDC +G DE + C PGQF C G CI SW CDG
Sbjct: 2741 VHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSWHCDG 2800
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD- 285
DC DGSDE N C +C + Q C K CIP +W CD + DC D +DE
Sbjct: 2801 EKDC-PDGSDEIN-CRTECRHNQFAC--DKTCIPASWQCDGKSDCE-----DGSDEGPQC 2851
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPN 343
C QC S +CIP W+CD E DC + + D ED A + C P
Sbjct: 2852 PNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GLGDEGSEDEGPQCGGVAHIPDCPPP 2910
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +S C+ CDG DC G+DE C
Sbjct: 2911 AHLC-TSGLCIDSHYVCDGDEDCPGGDDEYEGC 2942
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N ++CG SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3507 CFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKKDQFQCGNNRCMPF 3566
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD++ DC +
Sbjct: 3567 VWVCDGDIDC-PDKSDEANCDNVSCGPNDFQCD-SGRCIPLAWRCDDDHDCPNGE----- 3619
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF+ + C + KCIP W CD E DC D +DE +
Sbjct: 3620 ----DEPASCFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3665
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ + CDG+ C + DE
Sbjct: 3666 CQMRNCSESEFRCGTG-KCIKHNYRCDGEIHCDDNSDE 3702
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C ++ +CG+ N+C+ CDG DC + DE N C P F C G+CIP +W
Sbjct: 3549 LVCKKDQFQCGN-NRCMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAW 3607
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP +C F+ + C + KCIP W CD E DC
Sbjct: 3608 RCDDDHDC-PNGEDEPASC----FSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3658
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT--DEDWDKY 332
D +DE + C + +C + KCI HN+ CD E+ C ++D+I N E+ K
Sbjct: 3659 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDNSDEINCNITCKENQFKC 3716
Query: 333 FSHNAVL----------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ N + CH + CG+ +C+ CDG DC +G
Sbjct: 3717 AAFNTCINKQYKCDGDDDCPDGSDEVNCTCHSDHFSCGNG-KCIMSRWKCDGWDDCLDGS 3775
Query: 371 DE 372
DE
Sbjct: 3776 DE 3777
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 101/241 (41%), Gaps = 42/241 (17%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC---------------NAECTPGQFSCGMGKCIPE 220
++C+ CDG+ C +G DE P N + P F CG G+CIP
Sbjct: 2650 HRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGECIPR 2709
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ CD DC D SDE C V C S CI W CD + DC D
Sbjct: 2710 KFLCDSLKDC-RDFSDEKMCAPIPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCP--DGT 2766
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSH 335
D D C GQ +CA S CI +W CD E DC +D+I T+
Sbjct: 2767 DELDCANHTSLSCDPGQFRCA-SGNCIAGSWHCDGEKDCPDGSDEINCRTE--------- 2816
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCS 392
C N+ C + C+ S CDGK DC +G DEGP C N+ +L K S +C
Sbjct: 2817 ----CRHNQFACDKT--CIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCI 2870
Query: 393 P 393
P
Sbjct: 2871 P 2871
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 152/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3257 IGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3316
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRC--- 172
YW D ++E + N + P +LR
Sbjct: 3317 SINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHP 3376
Query: 173 ------GSSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+A S C P+ C D+G C A CT F C
Sbjct: 3377 YRQQQPMSGNPCLAANCSTLCVLSPEEPYYKCMCPTNFILADDGRTCRANCTAAHFECVN 3436
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP TC C GQ QCA +KKC + LCD C
Sbjct: 3437 TYKCIPFYWRCDTQDDC-GDGSDEPETCPPFHCEPGQYQCA-NKKCTHPSNLCDGINQCG 3494
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF+ ++C +
Sbjct: 3495 -----DGSDELNCDKF-TCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTP 3548
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P W+CD ++DC D +DE + + V C PN+ +C
Sbjct: 3549 LVCKKDQFQCGNNRCMPFVWVCDGDIDCP-----DKSDE-----ANCDNVSCGPNDFQC- 3597
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD DC NGEDE C ++KA C+ KC++ KC P
Sbjct: 3598 DSGRCIPLAWRCDDDHDCPNGEDEPASCFSSKATCDPTYFKCNNSKCIP 3646
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 145/391 (37%), Gaps = 106/391 (27%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+ G NR L + ++ + D+L+W D L+
Sbjct: 2458 TLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2515
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD--------GK 188
V V V + C +NQC L+ C+ G+
Sbjct: 2516 AVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSINC-DANQCKILNGQCEDVCILNKSGQ 2574
Query: 189 PDC--SNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
C + G +G C N C Q++C G+CIP CD C DGSDE +
Sbjct: 2575 ATCHCTQGVLAPDGRRCIAPVNTSCGLSQYNCHSGECIPLELTCDNVTHC-ADGSDEFRS 2633
Query: 241 -CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCS-------------TDDI-----VDNT 280
CI QC C + +CIP CD E C ++DI +NT
Sbjct: 2634 YCIFRQCPETHFMCQ-NHRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNT 2692
Query: 281 DEDWDKFHQCFNGQ-----------------------------------VQCALSKKCIP 305
E D F +C +G+ V C S CI
Sbjct: 2693 KEMPDMF-RCGSGECIPRKFLCDSLKDCRDFSDEKMCAPIPCEKNDMTFVHCGNSTICIM 2751
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD + DC D TDE +H ++ C P + RC S N C+A S CDG+ D
Sbjct: 2752 PRWRCDGDPDCP-----DGTDE--LDCANHTSLSCDPGQFRCASGN-CIAGSWHCDGEKD 2803
Query: 366 CSNGEDEGPFCNNKADCEN--LKCSHKCSPT 394
C +G DE N + +C + C C P
Sbjct: 2804 CPDGSDE---INCRTECRHNQFACDKTCIPA 2831
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLE-DGS 235
C+ + CD K DC + DEG C +C GQF CG+ + CIP +W CDG DC + D S
Sbjct: 73 CIPMRWKCDSKADCPDMSDEGSECAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDIS 132
Query: 236 DE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DE PN +C + QC + C+ + CD DC D++
Sbjct: 133 DELNCPNGDTPKCRAFEGQCR-NGDCLELSRFCDGRWDCDNDEL 175
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C FSCG GKCI W
Sbjct: 3707 ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDE---VNCTCHSDHFSCGNGKCIMSRW 3763
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC C +C ++ C+ ++ LCD DC ++ D +
Sbjct: 3764 KCDGWDDCL-DGSDESLETCAKTHCHANAFKCR-NQLCVRNSALCDGINDCGENE--DES 3819
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +C + Q QC + CI + CD + +C VD +DE + C
Sbjct: 3820 DAVCAALPKCRHDQFQCE-NDDCISKAFRCDGQYNC-----VDGSDE----------MNC 3863
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3864 QPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGP 3897
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 132/380 (34%), Gaps = 103/380 (27%)
Query: 158 GSHNAVLCHPNELR--------CGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAE 204
GSH P+ +R C S+ QC+ CDG DC +G DE GP CN
Sbjct: 933 GSHCIPQLAPSPIRPNCTSGYMCRSTRQCLDTKDMCDGFEDCEDGIDESSDPKGP-CNVN 991
Query: 205 C--TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
F C G+C S C C DG+D+ N + C + + C S +CI
Sbjct: 992 TCDKTHNFVCN-GRCYQRSLLCSTIPYC-SDGTDQANCHQNTCNSNEFTCHKSGRCIQLT 1049
Query: 263 WLCDEEMDCSTDDIVDNTDEDW----------------------DKFHQCFNG------Q 294
W+ D +DC DD D T E D C N +
Sbjct: 1050 WVNDGVVDCGPDDDSDETSETIFASKCPEFDCNNGRCRQFADVCDGIDNCGNNADEMECE 1109
Query: 295 VQCALSKK------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV------LCHP 342
+C +K C +CD DC D D + + K +H C P
Sbjct: 1110 QECEHGEKYCRPIGCYGEMHMCDGIHDCL--DFSDEANCNQTKSDNHPVTEWKELGECAP 1167
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
E C +C+ CDG C + DE C+H T R M
Sbjct: 1168 LEFACMFPFECIPDFLRCDGISHCFDKTDE------------FNCTH--INTTRFDMNET 1213
Query: 403 PAGQNPNK-----TQCVDADECLIDGS-----------------------CDQTCTNTHL 434
++P++ QCV D+ L DG C C NT
Sbjct: 1214 VICEHPDRLCGFSKQCVTVDQ-LCDGKNDCEDTTDEGFLCADKLCDRGHECSHRCHNTPE 1272
Query: 435 SYVCSCTEGYTLRPDGKSCT 454
Y+CSC + L+P+GK C+
Sbjct: 1273 GYICSCPDHLYLQPNGKRCS 1292
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1484 RIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1543
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1544 VLRNKEI 1550
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 4062 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4121
Query: 164 L 164
+
Sbjct: 4122 V 4122
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++++ + G ++ +I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2433 IQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAH 2491
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 126 IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFC 185
+QWP SL +D LYWCD L+T+E +R+DG+ VL ++ S Q L +
Sbjct: 791 MQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGREVLFKSDQFHPYSIVQNNGLIYWA 850
Query: 186 DGK 188
D K
Sbjct: 851 DNK 853
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
+C GQ +C +S+ CIP+NWLCD E DC DI D
Sbjct: 99 KCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDISD 133
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL----DERLEKAGMHGENRSPLVT 123
L ++ ++ R+ Q+ D L+S DL + F L ++ + G NR+ LVT
Sbjct: 391 GLVYLCTNAMTYCRVILQQV-DPLSSLDLDPTKGFMFYTDWTPSLSRSLLDGSNRTVLVT 449
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ PSS+ +D +++YW D + + V V +G + L P
Sbjct: 450 DQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 493
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+H+NT R D + + HP+ L CG S QCV + + CDGK DC + DEG C
Sbjct: 1201 THINTT---RFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLC 1252
>gi|442622882|ref|NP_001260800.1| LDL receptor protein 1, isoform D [Drosophila melanogaster]
gi|440214196|gb|AGB93333.1| LDL receptor protein 1, isoform D [Drosophila melanogaster]
Length = 4747
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 127/229 (55%), Gaps = 19/229 (8%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP W CD + DC D +DE + +C GQ +C +S+ CIP+NWLCD E DC
Sbjct: 99 CIPMRWKCDSKADCP-----DMSDEGSECAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCG 153
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DI D + + + C E +C + + C+ LS+FCDG+ DC N E + C+
Sbjct: 154 KGDISDELNCP-----NGDTPKCRAFEGQCRNGD-CLELSRFCDGRWDCDNDELQ---CD 204
Query: 378 NK-ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTH 433
+ A C L CS C TP+GA C+CP Q P N T+CVD DEC G+CDQ C NT
Sbjct: 205 KQNAACAALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRNTP 264
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY CSC GY + G C A+NVP EP ++IF S ++ + NG+
Sbjct: 265 GSYECSCVSGYA-KTKGNRCRAINVPPTEPTTLIFLSRDGVQSVGTNGT 312
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/379 (31%), Positives = 161/379 (42%), Gaps = 71/379 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
+H ++ C P + RC S N C+A S CDG+ DC +G DE C EC QF+C C
Sbjct: 2798 ANHTSLSCDPGQFRCASGN-CIAGSWHCDGEKDCPDGSDE-INCRTECRHNQFACDK-TC 2854
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP SW+CDG DC EDGSDE C ++ C QC S +CIP W+CD E DC + +
Sbjct: 2855 IPASWQCDGKSDC-EDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GL 2912
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDE 327
D E D+ QC S CI +++CD + DC DD +
Sbjct: 2913 GDEGSE--DEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVP 2970
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------- 374
+ + L H + C+ ++ CDGKPDC +G DE
Sbjct: 2971 AFQPHSCPGGSLMHQCQ-----DGLCIFKNQTCDGKPDCGDGSDETSSLCAHTRGCNGTD 3025
Query: 375 --------------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAG 405
C+ + DC + C H+C G C C G
Sbjct: 3026 DFRCKNGACIHADLLCDRRNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPG 3085
Query: 406 QN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
+ C D DEC C QTC NT+ SY C C +GY L D +C A + +
Sbjct: 3086 YKVLPKSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYAL-VDHHTCKATS---NV 3141
Query: 463 PASIIFSSTVDIRRIHLNG 481
+IFS+ IR++ + G
Sbjct: 3142 SMELIFSNRYYIRQVDMTG 3160
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 155/338 (45%), Gaps = 38/338 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIP 219
C+ NE C S +C+ L+ DG DC +D E F ++C +F C G+C
Sbjct: 1058 CNSNEFTCHKSGRCIQLTWVNDGVVDCGPDDDSDETSETIFA-SKCP--EFDCNNGRCRQ 1114
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMD 270
+ CDG +C + +DE C +C +G+ C C +CD +E +
Sbjct: 1115 FADVCDGIDNC-GNNADEME-CEQECEHGEKYCR-PIGCYGEMHMCDGIHDCLDFSDEAN 1171
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--- 327
C+ ++ +W + +C + C +CIP CD C D TDE
Sbjct: 1172 CNQTKSDNHPVTEWKELGECAPLEFACMFPFECIPDFLRCDGISHC-----FDKTDEFNC 1226
Query: 328 ---DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ ++ + V+C HP+ L CG S QCV + + CDGK DC + DEG C +K
Sbjct: 1227 THINTTRFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDR 1285
Query: 384 NLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
+CSH+C TP G +C CP PN +C C +C Q C ++ Y C C
Sbjct: 1286 GHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCL 1345
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+G+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1346 DGFDLGFDRFTCKS--TAPDEPY-VIFTNRQDIKGINL 1380
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 100/213 (46%), Gaps = 17/213 (7%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ CG+S C+ CDG PDC +G DE + C PGQF C G CI SW CDG
Sbjct: 2767 VHCGNSTICIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSWHCDG 2826
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD- 285
DC DGSDE N C +C + Q C K CIP +W CD + DC D +DE
Sbjct: 2827 EKDC-PDGSDEIN-CRTECRHNQFAC--DKTCIPASWQCDGKSDCE-----DGSDEGPQC 2877
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPN 343
C QC S +CIP W+CD E DC + + D ED A + C P
Sbjct: 2878 PNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GLGDEGSEDEGPQCGGVAHIPDCPPP 2936
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +S C+ CDG DC G+DE C
Sbjct: 2937 AHLC-TSGLCIDSHYVCDGDEDCPGGDDEYEGC 2968
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N ++CG SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3533 CFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKKDQFQCGNNRCMPF 3592
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD++ DC +
Sbjct: 3593 VWVCDGDIDC-PDKSDEANCDNVSCGPNDFQCD-SGRCIPLAWRCDDDHDCPNGE----- 3645
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF+ + C + KCIP W CD E DC D +DE +
Sbjct: 3646 ----DEPASCFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3691
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ + CDG+ C + DE
Sbjct: 3692 CQMRNCSESEFRCGTG-KCIKHNYRCDGEIHCDDNSDE 3728
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C ++ +CG+ N+C+ CDG DC + DE N C P F C G+CIP +W
Sbjct: 3575 LVCKKDQFQCGN-NRCMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAW 3633
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP +C F+ + C + KCIP W CD E DC
Sbjct: 3634 RCDDDHDC-PNGEDEPASC----FSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3684
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT--DEDWDKY 332
D +DE + C + +C + KCI HN+ CD E+ C ++D+I N E+ K
Sbjct: 3685 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDNSDEINCNITCKENQFKC 3742
Query: 333 FSHNAVL----------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ N + CH + CG+ +C+ CDG DC +G
Sbjct: 3743 AAFNTCINKQYKCDGDDDCPDGSDEVNCTCHSDHFSCGNG-KCIMSRWKCDGWDDCLDGS 3801
Query: 371 DE 372
DE
Sbjct: 3802 DE 3803
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/241 (33%), Positives = 101/241 (41%), Gaps = 42/241 (17%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC---------------NAECTPGQFSCGMGKCIPE 220
++C+ CDG+ C +G DE P N + P F CG G+CIP
Sbjct: 2676 HRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNTKEMPDMFRCGSGECIPR 2735
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ CD DC D SDE C V C S CI W CD + DC D
Sbjct: 2736 KFLCDSLKDC-RDFSDEKMCAPIPCEKNDMTFVHCGNSTICIMPRWRCDGDPDCP--DGT 2792
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSH 335
D D C GQ +CA S CI +W CD E DC +D+I T+
Sbjct: 2793 DELDCANHTSLSCDPGQFRCA-SGNCIAGSWHCDGEKDCPDGSDEINCRTE--------- 2842
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCS 392
C N+ C + C+ S CDGK DC +G DEGP C N+ +L K S +C
Sbjct: 2843 ----CRHNQFACDKT--CIPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCI 2896
Query: 393 P 393
P
Sbjct: 2897 P 2897
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 152/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3283 IGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3342
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRC--- 172
YW D ++E + N + P +LR
Sbjct: 3343 SINPLLNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHP 3402
Query: 173 ------GSSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+A S C P+ C D+G C A CT F C
Sbjct: 3403 YRQQQPMSGNPCLAANCSTLCVLSPEEPYYKCMCPTNFILADDGRTCRANCTAAHFECVN 3462
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP TC C GQ QCA +KKC + LCD C
Sbjct: 3463 TYKCIPFYWRCDTQDDC-GDGSDEPETCPPFHCEPGQYQCA-NKKCTHPSNLCDGINQCG 3520
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF+ ++C +
Sbjct: 3521 -----DGSDELNCDKF-TCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTP 3574
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P W+CD ++DC D +DE + + V C PN+ +C
Sbjct: 3575 LVCKKDQFQCGNNRCMPFVWVCDGDIDCP-----DKSDE-----ANCDNVSCGPNDFQC- 3623
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD DC NGEDE C ++KA C+ KC++ KC P
Sbjct: 3624 DSGRCIPLAWRCDDDHDCPNGEDEPASCFSSKATCDPTYFKCNNSKCIP 3672
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 145/391 (37%), Gaps = 106/391 (27%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+ G NR L + ++ + D+L+W D L+
Sbjct: 2484 TLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2541
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD--------GK 188
V V V + C +NQC L+ C+ G+
Sbjct: 2542 AVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSINC-DANQCKILNGQCEDVCILNKSGQ 2600
Query: 189 PDC--SNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
C + G +G C N C Q++C G+CIP CD C DGSDE +
Sbjct: 2601 ATCHCTQGVLAPDGRRCIAPVNTSCGLSQYNCHSGECIPLELTCDNVTHC-ADGSDEFRS 2659
Query: 241 -CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCS-------------TDDI-----VDNT 280
CI QC C + +CIP CD E C ++DI +NT
Sbjct: 2660 YCIFRQCPETHFMCQ-NHRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDMHPSNNNT 2718
Query: 281 DEDWDKFHQCFNGQ-----------------------------------VQCALSKKCIP 305
E D F +C +G+ V C S CI
Sbjct: 2719 KEMPDMF-RCGSGECIPRKFLCDSLKDCRDFSDEKMCAPIPCEKNDMTFVHCGNSTICIM 2777
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD + DC D TDE +H ++ C P + RC S N C+A S CDG+ D
Sbjct: 2778 PRWRCDGDPDCP-----DGTDE--LDCANHTSLSCDPGQFRCASGN-CIAGSWHCDGEKD 2829
Query: 366 CSNGEDEGPFCNNKADCEN--LKCSHKCSPT 394
C +G DE N + +C + C C P
Sbjct: 2830 CPDGSDE---INCRTECRHNQFACDKTCIPA 2857
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLE-DGS 235
C+ + CD K DC + DEG C +C GQF CG+ + CIP +W CDG DC + D S
Sbjct: 99 CIPMRWKCDSKADCPDMSDEGSECAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDIS 158
Query: 236 DE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DE PN +C + QC + C+ + CD DC D++
Sbjct: 159 DELNCPNGDTPKCRAFEGQCR-NGDCLELSRFCDGRWDCDNDEL 201
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C FSCG GKCI W
Sbjct: 3733 ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDE---VNCTCHSDHFSCGNGKCIMSRW 3789
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC C +C ++ C+ ++ LCD DC ++ D +
Sbjct: 3790 KCDGWDDCL-DGSDESLETCAKTHCHANAFKCR-NQLCVRNSALCDGINDCGENE--DES 3845
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +C + Q QC + CI + CD + +C VD +DE + C
Sbjct: 3846 DAVCAALPKCRHDQFQCE-NDDCISKAFRCDGQYNC-----VDGSDE----------MNC 3889
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3890 QPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGP 3923
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 132/380 (34%), Gaps = 103/380 (27%)
Query: 158 GSHNAVLCHPNELR--------CGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAE 204
GSH P+ +R C S+ QC+ CDG DC +G DE GP CN
Sbjct: 959 GSHCIPQLAPSPIRPNCTSGYMCRSTRQCLDTKDMCDGFEDCEDGIDESSDPKGP-CNVN 1017
Query: 205 C--TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
F C G+C S C C DG+D+ N + C + + C S +CI
Sbjct: 1018 TCDKTHNFVCN-GRCYQRSLLCSTIPYC-SDGTDQANCHQNTCNSNEFTCHKSGRCIQLT 1075
Query: 263 WLCDEEMDCSTDDIVDNTDEDW----------------------DKFHQCFNG------Q 294
W+ D +DC DD D T E D C N +
Sbjct: 1076 WVNDGVVDCGPDDDSDETSETIFASKCPEFDCNNGRCRQFADVCDGIDNCGNNADEMECE 1135
Query: 295 VQCALSKK------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV------LCHP 342
+C +K C +CD DC D D + + K +H C P
Sbjct: 1136 QECEHGEKYCRPIGCYGEMHMCDGIHDCL--DFSDEANCNQTKSDNHPVTEWKELGECAP 1193
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
E C +C+ CDG C + DE C+H T R M
Sbjct: 1194 LEFACMFPFECIPDFLRCDGISHCFDKTDE------------FNCTH--INTTRFDMNET 1239
Query: 403 PAGQNPNK-----TQCVDADECLIDGS-----------------------CDQTCTNTHL 434
++P++ QCV D+ L DG C C NT
Sbjct: 1240 VICEHPDRLCGFSKQCVTVDQ-LCDGKNDCEDTTDEGFLCADKLCDRGHECSHRCHNTPE 1298
Query: 435 SYVCSCTEGYTLRPDGKSCT 454
Y+CSC + L+P+GK C+
Sbjct: 1299 GYICSCPDHLYLQPNGKRCS 1318
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1510 RIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1569
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1570 VLRNKEI 1576
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 4088 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4147
Query: 164 L 164
+
Sbjct: 4148 V 4148
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++++ + G ++ +I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2459 IQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAH 2517
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 126 IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFC 185
+QWP SL +D LYWCD L+T+E +R+DG+ VL ++ S Q L +
Sbjct: 817 MQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGREVLFKSDQFHPYSIVQNNGLIYWA 876
Query: 186 DGK 188
D K
Sbjct: 877 DNK 879
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
+C GQ +C +S+ CIP+NWLCD E DC DI D
Sbjct: 125 KCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDISD 159
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 5/104 (4%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL----DERLEKAGMHGENRSPLVT 123
L ++ ++ R+ Q+ D L+S DL + F L ++ + G NR+ LVT
Sbjct: 417 GLVYLCTNAMTYCRVILQQV-DPLSSLDLDPTKGFMFYTDWTPSLSRSLLDGSNRTVLVT 475
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ PSS+ +D +++YW D + + V V +G + L P
Sbjct: 476 DQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 519
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+H+NT R D + + HP+ L CG S QCV + + CDGK DC + DEG C
Sbjct: 1227 THINTT---RFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLC 1278
>gi|348508901|ref|XP_003441991.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oreochromis niloticus]
Length = 4633
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 162/360 (45%), Gaps = 61/360 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C E +C +S +C+ CDG+ DC +G DE C C+P QF+C G+CIP ++
Sbjct: 72 CTSQEFKCVTSGECIPSGFVCDGEEDCIDGSDEQRTCGGRTCSPNQFTCREGQCIPSKYR 131
Query: 224 CDGFVDCLE------------------------------------DGSDEPNTCIHQCFN 247
CD DC++ DGSDE N C
Sbjct: 132 CDHVKDCVDNSDENNCNYPQCPEKTCANGACYNNSQHCNGLEDCRDGSDEFNCTTQHCSM 191
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
Q QCA + CIP + +CD DC D++DE + C Q CA S +CIP
Sbjct: 192 HQFQCA-NGFCIPMSLVCDHWDDCG-----DDSDELNCDYQSCSGNQFTCA-SGRCIPQQ 244
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD+ DC D +DE + N+ C+P E C S C+ + CD KPDC
Sbjct: 245 WVCDKFNDCG-----DYSDE---RGCDSNSRDCYPGEWGCPGSTMCIPVGNVCDDKPDCP 296
Query: 368 NGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLI 421
G DE + C L C C P+P+G C+CP G + CVD ++C I
Sbjct: 297 GGTDETNTTAQQTCGLERCAALSCEFYCHPSPQGGACYCPDGFIVANDSRSCVDYNDCQI 356
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G CDQ C + ++ CSC +GY L G C A NV P +IF++ D+ L+G
Sbjct: 357 WGICDQLCEDRPGTHHCSCADGYVLE-QGHVCRA-NVSAGLP-QLIFTNGGDVMIADLHG 413
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 158/325 (48%), Gaps = 33/325 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C PN C ++C++ CDG DC +G DE C C+ +F+C G +C+ S++
Sbjct: 1153 CPPNYFLC-PDHRCISSFYVCDGDQDCLDGSDEKD-CEFSCSSFEFACASGDQCVYSSYR 1210
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC C+P W CD DC D +
Sbjct: 1211 CDGVFDC-RDHSDEQGCPTRGPGLCHDDEFQCQSDGFCVPDEWECDGHSDCE-----DGS 1264
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C + QCA +K CIP +WLCD + DC D+ D + +
Sbjct: 1265 DEHNSCPPVTCGSNYFQCA-NKICIPMSWLCDGQNDCR--DMSDELNCPTPPF------T 1315
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRG 397
C + C S C+ K CDG+ DC NG DE P CN + DC N CS C P G
Sbjct: 1316 CPSGQWLCPISEVCIDQDKVCDGQRDCPNGADESPICN-EDDCSLSNGGCSDGCVQGPFG 1374
Query: 398 AMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
A C CP G N +KT C D +ECL+ G C Q C N S+ C C++GY L PDG++C
Sbjct: 1375 AECTCPPGYQLLNDSKT-CDDINECLVPGFCSQQCYNERGSFRCHCSDGYLLEPDGRTCK 1433
Query: 455 AVN----VPQDEPASIIFSSTVDIR 475
A N V S I ++ V+IR
Sbjct: 1434 ATNPSAAVLLLAKRSQIIANRVNIR 1458
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 155/368 (42%), Gaps = 66/368 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIPES 221
C P++ RC +C+ + CD DC++G DE C C+P F+C G C+PES
Sbjct: 2867 CAPDQFRC-DVGKCIPQTWVCDFIKDCTDGTDEPASCEDIIRTCSPNHFTCTNGNCVPES 2925
Query: 222 WKCDGFVDCLEDGSDEP------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--- 272
CDG DC ++ + P TC F +C+P +++CD E DC+
Sbjct: 2926 LVCDGNNDCWDNSDEAPELECGQRTCSSDQFTCPTWYPGHPRCVPLSFVCDGEKDCANAA 2985
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C + Q C+ +
Sbjct: 2986 DELQNCPNRTCHMNEFACANGLCILVPFHCDRVNDCGDGSDEVGCTYDTCSSNQFTCS-N 3044
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CI ++CD + DC +D +DE D C P + C S +C+ +K C
Sbjct: 3045 GACIYSFYICDGQNDC-----LDGSDEA-DSLCLTPQPTCSPQQYMC-KSGECIDSNKVC 3097
Query: 361 DGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDAD 417
+G+ DC + DE G N D KC+ C+ T G C C G P+ C D D
Sbjct: 3098 NGQKDCQDDSDEKGCGINECLDPAVHKCAQICTDTLTGYYCSCNPGYQLMPDGKACEDLD 3157
Query: 418 ECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC---TAVNVPQDEPASIIFSSTVD 473
EC+ C Q C N+ SY C C GY PDG++C + +N +++++
Sbjct: 3158 ECVSTPAVCSQICENSFGSYHCKCAPGYIREPDGRTCRQNSGIN------PYLLYTNRYY 3211
Query: 474 IRRIHLNG 481
IR + +G
Sbjct: 3212 IRNLTTDG 3219
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 148/363 (40%), Gaps = 58/363 (15%)
Query: 163 VLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C P + RC +++C+ + CDG DC + DE C+ +F C +CIP S
Sbjct: 3721 VTCDPLGDFRC-DNHRCIPIRWQCDGSNDCGDSSDERNCQPRPCSESEFRCDNEQCIPGS 3779
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W C+ DC D SDE + + C G QC S CIP CD DC D+ D T
Sbjct: 3780 WACNHVNDC-GDNSDERDCELQTCRPGFFQCD-SGHCIPAILQCDNRPDCL--DLSDETS 3835
Query: 282 --EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS---------------------- 317
+ C Q QCA + C+ W+CD DC
Sbjct: 3836 CPTRYPGGRYCPEHQFQCA-NHICVNQGWVCDGIDDCGDRSDEQLNLCLNITCEMPSRFR 3894
Query: 318 ---------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
DD D +DE D + C E +C ++ CVAL CD
Sbjct: 3895 CDNGYCVYAGVVCNKKDDCGDGSDEKEDLCMTPTHAPCTLEEFKC-TNGHCVALPYVCDH 3953
Query: 363 KPDCSNGEDEGPFCNNKAD--CENLKCSHKCS-PTPRGAMCFCPAGQ--NPNKT-QCVDA 416
+C + DE CN D C+ C HKC+ G +C C G +P+ T C+D
Sbjct: 3954 NDNCGDRTDEMG-CNFGLDRNCDENLCQHKCTNLNGTGFICSCRPGYTVDPDSTYTCLDI 4012
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
+EC + G+C Q C NT Y C C GY +GK C A ++ + IRR
Sbjct: 4013 NECEVYGTCPQVCKNTKGGYDCECAPGYRKVGNGKMCEAAGA----APMLLLPENIRIRR 4068
Query: 477 IHL 479
+L
Sbjct: 4069 FNL 4071
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 150/362 (41%), Gaps = 84/362 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +++C ++N C+ CDG +C + DE P FC C P QF C +GKCIP++W
Sbjct: 2825 CPNGQIKCDNTNICIYPGNLCDGFNNCGDNSDENPLFCAGRTCAPDQFRCDVGKCIPQTW 2884
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DG+DEP +C I C C + C+P + +CD DC DN
Sbjct: 2885 VCDFIKDCT-DGTDEPASCEDIIRTCSPNHFTCT-NGNCVPESLVCDGNNDC-----WDN 2937
Query: 280 TDEDWD---KFHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCS--------------- 317
+DE + C + Q C +C+P +++CD E DC+
Sbjct: 2938 SDEAPELECGQRTCSSDQFTCPTWYPGHPRCVPLSFVCDGEKDCANAADELQNCPNRTCH 2997
Query: 318 --------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+D D +DE Y + C N+ C S+ C+
Sbjct: 2998 MNEFACANGLCILVPFHCDRVNDCGDGSDEVGCTYDT-----CSSNQFTC-SNGACIYSF 3051
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT-----Q 412
CDG+ DC +G DE AD L CSP + MC + NK
Sbjct: 3052 YICDGQNDCLDGSDE-------ADSLCLTPQPTCSP--QQYMCKSGECIDSNKVCNGQKD 3102
Query: 413 CVD--------ADECLIDG--SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
C D +ECL C Q CT+T Y CSC GY L PDGK+C ++
Sbjct: 3103 CQDDSDEKGCGINECLDPAVHKCAQICTDTLTGYYCSCNPGYQLMPDGKACEDLDECVST 3162
Query: 463 PA 464
PA
Sbjct: 3163 PA 3164
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 114/243 (46%), Gaps = 34/243 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C + RCG + +CV + CDG+ DC +G DE C C+ G F C G C +
Sbjct: 3516 CSSTQFRCGDNEKCVPIWWKCDGQSDCGDGSDEPQTCPPRYCSVGLFQCQDGNCTYPGFI 3575
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG +C DGSDE H+C Q QC +K+CIP +W CD +DC+ D +D
Sbjct: 3576 CDGHQNC-PDGSDEDAALCSDHRCAENQFQCK-NKRCIPVSWHCDGVVDCT-----DGSD 3628
Query: 282 EDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED + Q C G+ CA + +C+P ++CD + DC D +DE ++ +
Sbjct: 3629 EDAETCSQKTCKPGEFTCA-NGRCVPSMYVCDAQDDCG-----DGSDEPYEVCMGPDYKC 3682
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHK 390
E C ++ +C+ CDG DC + DE CE + C +H+
Sbjct: 3683 DEDTEFSCKTNYRCIPQWARCDGSNDCIDNSDE-------EGCEEVTCDPLGDFRCDNHR 3735
Query: 391 CSP 393
C P
Sbjct: 3736 CIP 3738
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 161/417 (38%), Gaps = 114/417 (27%)
Query: 52 LNGTHTLALEFNHRN--------QSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+ G LAL++ R S+ I+ +L D +++ + P
Sbjct: 3272 IGGAEGLALDWVGRKLYWVDRYYGSVHVIELDGRYQKKLLSGHFTDRNHTYVITRPRAVA 3331
Query: 104 LDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------ 137
++ + + +AGM G N S ++T ++WP++L IDY
Sbjct: 3332 VNPKYGWLYWTDWGDAAYIGRAGMDGTNVSAIITTKLEWPNALTIDYTNNKIFFADSHLN 3391
Query: 138 -----------------------------QDILYWCDSHLNTVESV-RVDGSHNAVL--- 164
+D +YW D + +TVE + G V+
Sbjct: 3392 FLDFADMDGQNRHRAIAGSLPHVYAISLFEDWVYWTDWNTHTVEKAHKYTGEERTVMGNN 3451
Query: 165 ---------CHPNELRCGSSNQC----VALSKFCDGKPDCSNGEDEGP------------ 199
HP + S N C + S C P E P
Sbjct: 3452 THRPYDIHVYHPYR-QPQSENPCSSHYLTCSHLCLIAPGGQRATCECPDHFIGVAVGFKI 3510
Query: 200 FCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKK 257
C A+C+ QF CG KC+P WKCDG DC DGSDEP TC C G QC
Sbjct: 3511 QCVADCSSTQFRCGDNEKCVPIWWKCDGQSDC-GDGSDEPQTCPPRYCSVGLFQCQ-DGN 3568
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
C ++CD +C D +DED H+C Q QC +K+CIP +W CD +D
Sbjct: 3569 CTYPGFICDGHQNCP-----DGSDEDAALCSDHRCAENQFQCK-NKRCIPVSWHCDGVVD 3622
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ D +DED + + + C P E C ++ +CV CD + DC +G DE
Sbjct: 3623 CT-----DGSDEDAE---TCSQKTCKPGEFTC-ANGRCVPSMYVCDAQDDCGDGSDE 3670
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 105/229 (45%), Gaps = 30/229 (13%)
Query: 157 DGSHNAVLCHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDE-GPFC-NAECTPGQF 210
DGS C P G C CDG +C +G DE C + C QF
Sbjct: 3544 DGSDEPQTCPPRYCSVGLFQCQDGNCTYPGFICDGHQNCPDGSDEDAALCSDHRCAENQF 3603
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEM 269
C +CIP SW CDG VDC + ++ TC + C G+ CA + +C+P ++CD +
Sbjct: 3604 QCKNKRCIPVSWHCDGVVDCTDGSDEDAETCSQKTCKPGEFTCA-NGRCVPSMYVCDAQD 3662
Query: 270 DCSTDDIVDNTDEDWD----KFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC D +DE ++ ++C + + C + +CIP CD DC +DN
Sbjct: 3663 DCG-----DGSDEPYEVCMGPDYKCDEDTEFSCKTNYRCIPQWARCDGSNDC-----IDN 3712
Query: 325 TDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE+ V C P + RC +++C+ + CDG DC + DE
Sbjct: 3713 SDEE-----GCEEVTCDPLGDFRC-DNHRCIPIRWQCDGSNDCGDSSDE 3755
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 130/311 (41%), Gaps = 56/311 (18%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+++E++ + GENR ++ + + +P + I Y QDI +W D + + + DGS VL
Sbjct: 2576 DKIERSTLTGENRE-VIMQGLSYPFGMTI-YKQDI-FWTDWTERGVFRASKNDGSGFTVL 2632
Query: 165 CH-----PNELRCGSSNQCVALSKFCDG--------------KPDC-----------SNG 194
P ++ + ++ S FC P+C +NG
Sbjct: 2633 AQNLEYLPKDIHIHAESKQEICSSFCQQFNGGCSHVCVSGPVGPECQCPHEGNWYLANNG 2692
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
+D C QF+C G CI WKCDG+ DC ++ + C H C C
Sbjct: 2693 KDCIQDTGKRCQADQFTCLNGNCILARWKCDGYNDCHDNSDELERVCAFHTCSATDFTCD 2752
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CIP ++ CD DC DN+DE F C + +CI ++CD
Sbjct: 2753 -NGRCIPLSYTCDYTNDCG-----DNSDEQGCPFPTCNPATEFTCANGRCISATFVCDGY 2806
Query: 314 MDC---STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
DC +T D ++ D C +++C ++N C+ CDG +C +
Sbjct: 2807 NDCRDNATSDEINCPDR-----------TCPNGQIKCDNTNICIYPGNLCDGFNNCGDNS 2855
Query: 371 DEGP-FCNNKA 380
DE P FC +
Sbjct: 2856 DENPLFCAGRT 2866
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 135/372 (36%), Gaps = 104/372 (27%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+C S CDG DC + DE A C+P F+C CI SW+CDG DC D
Sbjct: 1039 GRCRPNSDRCDGIVDCIDQTDEANCTDSGATCSPYAFTCNNKHCIYASWRCDGMDDC-GD 1097
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------- 271
GSDE P C +G C + +CI W+CD E DC
Sbjct: 1098 GSDEINCPTRVPTSCSSGYFTCN-NNRCISAIWVCDGENDCGDGSDEHNCNSTITTCPPN 1156
Query: 272 -----------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
D +D +DE +F C + + CA +C+ ++ CD
Sbjct: 1157 YFLCPDHRCISSFYVCDGDQDCLDGSDEKDCEF-SCSSFEFACASGDQCVYSSYRCDGVF 1215
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-- 372
DC D++DE + LCH +E +C S CV CDG DC +G DE
Sbjct: 1216 DCR-----DHSDEQGCP--TRGPGLCHDDEFQCQSDGFCVPDEWECDGHSDCEDGSDEHN 1268
Query: 373 ----------------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--P 408
C+ + DC ++ C PTP CP+GQ P
Sbjct: 1269 SCPPVTCGSNYFQCANKICIPMSWLCDGQNDCRDMSDELNC-PTPPFT---CPSGQWLCP 1324
Query: 409 NKTQCVDADEC-----------------------LIDGSCDQTCTNTHLSYVCSCTEGYT 445
C+D D+ L +G C C C+C GY
Sbjct: 1325 ISEVCIDQDKVCDGQRDCPNGADESPICNEDDCSLSNGGCSDGCVQGPFGAECTCPPGYQ 1384
Query: 446 LRPDGKSCTAVN 457
L D K+C +N
Sbjct: 1385 LLNDSKTCDDIN 1396
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C QF C G+CI W+CDG DC +D SDE N C + + +C S +CIP ++
Sbjct: 33 CGSDQFQCNNGQCIDIGWRCDGTKDCADD-SDELNCPPPSCTSQEFKCVTSGECIPSGFV 91
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC +D +DE C Q C +CIP + CD DC VD
Sbjct: 92 CDGEEDC-----IDGSDEQRTCGGRTCSPNQFTCR-EGQCIPSKYRCDHVKDC-----VD 140
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DE+ Y C ++ C S+ C+G DC +G DE
Sbjct: 141 NSDENNCNYPQCPEKTC--------ANGACYNNSQHCNGLEDCRDGSDE 181
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 113/273 (41%), Gaps = 55/273 (20%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C + + +C S +CIP ++CD E DC +D +DE +R G +F
Sbjct: 72 CTSQEFKCVTSGECIPSGFVCDGEEDC-----IDGSDE------QRTCGGRTCSPNQFTC 120
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
R + Q + S + RC + D +++ D EN
Sbjct: 121 R-------EGQCIPS-KYRCDHVKDCVDNSD--------------------EN------- 145
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH----NAVLCHPNELRCGSSNQCVA 180
N +P Y H N +E R DGS C ++ +C ++ C+
Sbjct: 146 NCNYPQCPEKTCANGACYNNSQHCNGLEDCR-DGSDEFNCTTQHCSMHQFQC-ANGFCIP 203
Query: 181 LSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-- 238
+S CD DC + DE C+ QF+C G+CIP+ W CD F DC D SDE
Sbjct: 204 MSLVCDHWDDCGDDSDELNCDYQSCSGNQFTCASGRCIPQQWVCDKFNDC-GDYSDERGC 262
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
++ C+ G+ C S CIP +CD++ DC
Sbjct: 263 DSNSRDCYPGEWGCPGSTMCIPVGNVCDDKPDC 295
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 118/304 (38%), Gaps = 68/304 (22%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++E+A + G R+ +++ + P+ L IDY + +LYW D L+ +E + G + V
Sbjct: 2534 KIERATLGGNFRTVIISTGLTSPNGLSIDYEERMLYWADVSLDKIERSTLTGENREVIMQ 2593
Query: 164 -LCHPNELRC----------------------GSSNQCVALSKFCDGKPDCSNGEDEGPF 200
L +P + GS +A + K + E +
Sbjct: 2594 GLSYPFGMTIYKQDIFWTDWTERGVFRASKNDGSGFTVLAQNLEYLPKDIHIHAESKQEI 2653
Query: 201 CNAECTPGQFSCG------MGKCIPE-------SWK-CDGFVDCLEDGSDEPNTCIHQCF 246
C++ C QF+ G G PE +W + DC++D C
Sbjct: 2654 CSSFCQ--QFNGGCSHVCVSGPVGPECQCPHEGNWYLANNGKDCIQDTGKRCQADQFTCL 2711
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCI 304
NG CI W CD DC DN+DE FH C C + +CI
Sbjct: 2712 NG--------NCILARWKCDGYNDCH-----DNSDELERVCAFHTCSATDFTCD-NGRCI 2757
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P ++ CD DC DN+DE + + C+P ++ +C++ + CDG
Sbjct: 2758 PLSYTCDYTNDCG-----DNSDEQGCPFPT-----CNPATEFTCANGRCISATFVCDGYN 2807
Query: 365 DCSN 368
DC +
Sbjct: 2808 DCRD 2811
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 126/350 (36%), Gaps = 50/350 (14%)
Query: 36 IVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNS 93
IVD DW T++ + F ++S N + + + +
Sbjct: 789 IVDAMAYDWTSKVLFWTTSTYSSVVAFRVTDKSRRDIVTGLGNPKGIAVHPSAGYLFWSD 848
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA + + G N PLV + WP L +DY D LYW D+ L+ +
Sbjct: 849 WYRPA--------VITRGFTDGSNAVPLVNTTLGWPFGLAVDYMNDRLYWVDTLLDQIGH 900
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ ++GS + G Q +L+ + D S+ F G +
Sbjct: 901 IDIEGSDRKTFTN-----IGQITQPYSLTIYTD-YLYVSDTRTSAIF-EMRKRDGGGNIM 953
Query: 214 MGKCIPESWKCDGFVDCLEDGSDE-----PNT-CIHQCFN----GQV-QCALSKKCIPHN 262
+ + I + L + PN C H CF G+V C K
Sbjct: 954 VRQGITGIMNIKAYTADLHSTFNSRCNMLPNGHCSHFCFPTPNFGRVCGCPYGMK----- 1008
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
L + DC DD V D + C + +C +C P++ CD +DC +
Sbjct: 1009 -LQSNQRDCIKDDSVPPPD------NICGDYSFECD-EGRCRPNSDRCDGIVDC-----I 1055
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D TDE + + C P C ++ C+ S CDG DC +G DE
Sbjct: 1056 DQTDE---ANCTDSGATCSPYAFTC-NNKHCIYASWRCDGMDDCGDGSDE 1101
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 24/151 (15%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIF 102
D F L T ++A+++ RN +N+ L + +L S ++ P
Sbjct: 1502 DKQAVFSSGLMVTESIAVDWVGRNLYWTDSVMENIEVSTLD-GRFRKVLLSKNITNPRGL 1560
Query: 103 PLDER----------------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDS 146
LD R +E+A M G R +V+ I WP+ L +DY +Y+ D+
Sbjct: 1561 ALDPRNHTNLMFWSDWGQNPRIEQASMDGTMRKVIVSTKIYWPNGLALDYTTQRVYFADA 1620
Query: 147 HLNTVESVRVDG-------SHNAVLCHPNEL 170
+L ++ DG + + VL HP +
Sbjct: 1621 YLRYIDYCDYDGNNRYQVMASDVVLQHPYSM 1651
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G NR+ L ++++ P L +DY+ + LYW D L+ + + +DG+ ++
Sbjct: 2217 KIERALLDGTNRTVLASESLASPRGLTVDYSNNFLYWTDDVLDMISRMAIDGTERQII 2274
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+ +LE+A M G NR LV + P+ + +D +YW DSH +TVE+V G
Sbjct: 536 VQSKLERAFMDGSNRFELVKSRLGTPTGITLDIITQRVYWSDSHFDTVETVTYSG 590
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + + G+ R LV+ + WP+ L ID+ N D +YW DS + +ES+ G
Sbjct: 4211 KIECSWLDGQERKVLVSDGLGWPTGLSIDFTNNDRIYWSDSKESRIESILPSGEQRKTAV 4270
Query: 166 H 166
+
Sbjct: 4271 Y 4271
>gi|195381779|ref|XP_002049622.1| GJ21697 [Drosophila virilis]
gi|194144419|gb|EDW60815.1| GJ21697 [Drosophila virilis]
Length = 4618
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 121/221 (54%), Gaps = 22/221 (9%)
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E DC D +DE + K +C GQ +CA S KCIP NWLCD E DC D
Sbjct: 3 WKCDSEPDCK-----DGSDETSECAKSSKCNEGQFRCAQSLKCIPSNWLCDGEYDCGKGD 57
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK- 379
I D T+ A C E C + C+ LS+FCDG DC N E + C+ +
Sbjct: 58 ISDETNCP-----DSVAPKCRAIESEC-HNGACLELSRFCDGHWDCDNDELQ---CDKQN 108
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSY 436
C L CS+ C TP+GA C+CPAGQ P N T+CVD DEC + G+CDQ C NT SY
Sbjct: 109 VACAALNCSYNCKLTPQGARCYCPAGQVPESLNSTRCVDYDECSVPGTCDQQCRNTPGSY 168
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C+C GYT G C A+NVP EPA++ S IRRI
Sbjct: 169 ECACISGYT--KHGSRCLAINVPPSEPATLSLLSVGTIRRI 207
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 124/412 (30%), Positives = 163/412 (39%), Gaps = 116/412 (28%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECTPGQFSCGMGKCIPESWKCDGF 227
C +S C+ + CDG+PDC +G DE CN + C GQF C G+CIP W+CDG
Sbjct: 2637 CENSTLCIMPTWRCDGEPDCPDGTDE-LGCNNNTLSTCAIGQFRCANGRCIPGGWRCDGE 2695
Query: 228 VDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DC+ E+GSDE N C C Q C CIP +W CD + DC D TDE
Sbjct: 2696 NDCMDNAGENGSDELN-CRPSCLVNQFSC--DNGCIPSSWQCDGKSDCE-----DGTDEG 2747
Query: 284 WD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--C 340
C QC S +CIP W+CD E DC ++ D ED + A + C
Sbjct: 2748 PQCPNRPCRAHLFQCKSSGRCIPQKWVCDGEQDCPSNG--DQGSEDEGPHCGGVAHIPDC 2805
Query: 341 HPNELRC---------------------------------------GSSNQ------CVA 355
P C GSS C+
Sbjct: 2806 QPPAFLCSTGQCIDSHYVCDGDEDCPGGDDEYDGCEPVYPPHACPGGSSMHQCQDGLCIF 2865
Query: 356 LSKFCDGKPDCSNGEDEGP---------------------------FCNNKADCENLK-- 386
++ CDGKPDC +G DE P C+ + DC +
Sbjct: 2866 KNQTCDGKPDCGDGSDELPSLCKHTRACNGADDFRCKNGACISADLLCDRRNDCADYSDE 2925
Query: 387 -------------CSHKCSPTPRGAMCFCPAGQN---PNKTQCVDADECLIDGSCDQTCT 430
C H+C G C C G + C D DEC C QTC
Sbjct: 2926 ELCNVNECLIPDICEHECVDKVVGFECRCRPGYKLLPKSPHLCTDIDECDEQQPCSQTCI 2985
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
NT+ SY C C +GY LR D ++C A + + +IFS+ IR+++ G+
Sbjct: 2986 NTYGSYKCLCAKGYELR-DHRTCKATS---NVTMKLIFSNRYYIRQVNHTGN 3033
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 155/334 (46%), Gaps = 30/334 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC----SNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C+ NE C S +C+ L+ DG DC S+ E + ++C +F CG G+C
Sbjct: 938 CNSNEFTCEKSGRCIQLTWVNDGVIDCGPDDSSDESLDLYSGSKCP--EFDCGNGRCRQF 995
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S CDG +C + +DE C H+C +G+ C C +CD DC +D D
Sbjct: 996 SDICDGLDNC-GNNADEA-ACEHECGHGERYCR-PIGCYGDMHICDGVNDC--EDFSDEA 1050
Query: 281 D-----------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDED 328
+ W + +C + CA +CIP CD C D ++ T
Sbjct: 1051 NCNQTKSDNHPLSGWKELGECATFEFACADPFECIPEFLRCDGINHCYDKTDELNCTHIH 1110
Query: 329 WDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
K+ + V+C HP+ L CG SN+C+ +S+ CDG DC + DEG C ++ + +C
Sbjct: 1111 PTKFDMNETVICEHPDRL-CGFSNKCITVSQLCDGNNDCEDTTDEGFLCADELCEQGHEC 1169
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
SH C TP G +C CP PN +C C +C Q C N Y C C EGY
Sbjct: 1170 SHNCHNTPEGYICSCPPHLYLQPNGKRCSMQHACEHWDTCSQVCENNGKGYACQCLEGYD 1229
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
L D +C + DEP +IF++ DIR I+L
Sbjct: 1230 LAYDKFTCKS--TAPDEPY-VIFTNRQDIRGINL 1260
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 96/218 (44%), Gaps = 32/218 (14%)
Query: 165 CHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N L+C SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3405 CFENHLKCEATANSSAFCVDSVKRCDGVKDCPGGEDEAGCTPLVCKKDQFQCGNNRCMPY 3464
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD+E+DC +
Sbjct: 3465 VWVCDGDIDC-ADKSDETNCEHVSCGPNDFQCN-SGRCIPLAWRCDDEVDCPNGE----- 3517
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ C + C + KCIP W CD E DC D +DE +
Sbjct: 3518 ----DEPPSCHTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3563
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ CDG+ C + DE
Sbjct: 3564 CQMRNCSESEFRCGTG-KCIKHDYRCDGEIHCDDSSDE 3600
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 111/409 (27%), Positives = 163/409 (39%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ KAGM G ++ +N+ WP++L I +
Sbjct: 3155 IGKAGMDGSQPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3214
Query: 138 -----------------QDILYWCDSHLNTVESV-RVDGSHNAVLC----HPNELRCG-- 173
+D +YW D ++E + DG + + L P +LR
Sbjct: 3215 SINPNLNLHHIFAIAVWEDRIYWSDWETKSIEYCNKYDGQNCSTLITTIHRPMDLRVFHP 3274
Query: 174 -------SSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+ S C P+ C N ++G C A CT F C
Sbjct: 3275 YRQQQPISGNPCLQANCSTLCLLSPEAPYYKCACPNNFVLAEDGRTCRANCTAAHFECVN 3334
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP TC C GQ QC+ +KKCI + +CD C
Sbjct: 3335 TYKCIPFYWRCDTQDDC-GDGSDEPETCPPFHCEPGQYQCS-NKKCIHPSAICDGVNQCG 3392
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF ++C +
Sbjct: 3393 -----DGSDELNCDKF-TCFENHLKCEATANSSAFCVDSVKRCDGVKDCPGGEDEAGCTP 3446
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P+ W+CD ++DC+ D +DE ++ S C PN+ +C
Sbjct: 3447 LVCKKDQFQCGNNRCMPYVWVCDGDIDCA-----DKSDETNCEHVS-----CGPNDFQC- 3495
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCE--NLKCSH-KCSP 393
+S +C+ L+ CD + DC NGEDE P C+ +KA C+ KC++ KC P
Sbjct: 3496 NSGRCIPLAWRCDDEVDCPNGEDEPPSCHTSKATCDPTYFKCNNSKCIP 3544
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C PN+ +C + N C+ CDG DC +G DE N C P F+CG GKCI W
Sbjct: 3605 ITCKPNQFKCAAFNTCINKQYQCDGDDDCPDGSDE---VNCTCPPDHFTCGNGKCIMSRW 3661
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC H C +CA + CI + LCD DC ++ D +
Sbjct: 3662 KCDGWDDCL-DGSDESYGTCAHVHCHYNAFKCA-NLLCIRKSALCDGVNDCGNNE--DES 3717
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
D+ +C + Q QC + CI N+ CD + +C +D +DE
Sbjct: 3718 DQVCAALPKCRHDQFQCE-NDDCISKNFRCDGQYNC-----IDGSDE 3758
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 149/419 (35%), Gaps = 134/419 (31%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+A G NR +V + + + D+L+W D L+
Sbjct: 2368 TLDLEQQQLYWADARLDKIERANYDGTNR--VVLAHTTPKHAFAMAVYGDLLFWTDWVLH 2425
Query: 150 TVESVRVDGSHNAVLCHPNELRCGS------------SNQCVALSKFCD----------G 187
V + + + R +NQC L+ C+
Sbjct: 2426 AVVRANKYTGTDVLFLREHVARPMGIIAVQNSTINCDANQCKILNGLCEDVCILNKNGLA 2485
Query: 188 KPDCSNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNT 240
C+ G +G C N C Q++C G+CIP CD CL DGSDE N
Sbjct: 2486 SCHCTQGVLAPDGRRCIAPVNTSCGKSQYNCHSGECIPLELTCDNVTHCL-DGSDELRNY 2544
Query: 241 CI--------------------------HQCFNGQVQCAL------------SKKCIPHN 262
C+ QC +G + AL S +CI +
Sbjct: 2545 CVIRQCPENYFMCQNHRCIAQDQTCDGLQQCGDGSDETALLCKCQPDQFRCGSGECISRS 2604
Query: 263 WLCDEEMDC--------------------------------------STDDIVDNTDE-- 282
+LCD DC D D TDE
Sbjct: 2605 FLCDHMRDCRDFSDEKHCPQRTCEQGDVLFEHCENSTLCIMPTWRCDGEPDCPDGTDELG 2664
Query: 283 -DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ + C GQ +CA + +CIP W CD E DC +DN E+ + + C
Sbjct: 2665 CNNNTLSTCAIGQFRCA-NGRCIPGGWRCDGENDC-----MDNAGEN-----GSDELNCR 2713
Query: 342 P----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN---KADCENLKCSHKCSP 393
P N+ C N C+ S CDGK DC +G DEGP C N +A K S +C P
Sbjct: 2714 PSCLVNQFSC--DNGCIPSSWQCDGKSDCEDGTDEGPQCPNRPCRAHLFQCKSSGRCIP 2770
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 122/313 (38%), Gaps = 65/313 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------N 161
+E+ + G R L+ K+ Q+ ++ YN+ I+YW D+ +T+ V H +
Sbjct: 718 IERIKLDGTGRE-LLFKSEQFHPFSIVQYNE-IVYWVDNINSTIWRFPVRHVHKTSTFSS 775
Query: 162 AVLCHPN----ELRC--------GSSNQCVALSKFCDGK------------PDCSNGEDE 197
V PN +LR + ALSK C G PD
Sbjct: 776 TVHLQPNGNAVDLRIFDVATQPLPQTPSSCALSK-CPGMCLNTPKGAICRCPDGYTLNGT 834
Query: 198 GPFCNAECTPGQFSC-------------GMGKCIPESWKCDGFVDCLEDGSDEPN----T 240
G C + TP S G +CI CDGF DC EDGSDE N
Sbjct: 835 GTHCIPQLTPSTVSAPVRSNCTSGYQCRGTLQCIDGKDLCDGFEDC-EDGSDETNDTQGP 893
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C Q + ++ + +C LC CS D +D+ + + C + + C S
Sbjct: 894 CNPQTCDKKLHFVCNGRCYQRALLCSSIAYCS-----DGSDQLNCEHNTCNSNEFTCEKS 948
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CI W+ D +DC D D++DE D Y E CG+ +C S C
Sbjct: 949 GRCIQLTWVNDGVIDCGPD---DSSDESLDLYSGSKC-----PEFDCGNG-RCRQFSDIC 999
Query: 361 DGKPDCSNGEDEG 373
DG +C N DE
Sbjct: 1000 DGLDNCGNNADEA 1012
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 8/99 (8%)
Query: 185 CDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG-KCIPESWKCDGFVDCLE-DGSDE--- 237
CD +PDC +G DE C +++C GQF C KCIP +W CDG DC + D SDE
Sbjct: 5 CDSEPDCKDGSDETSECAKSSKCNEGQFRCAQSLKCIPSNWLCDGEYDCGKGDISDETNC 64
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
P++ +C + +C + C+ + CD DC D++
Sbjct: 65 PDSVAPKCRAIESECH-NGACLELSRFCDGHWDCDNDEL 102
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 119/347 (34%), Gaps = 71/347 (20%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGKCIPESWKC 224
+C + QC+ CDG DC +G DE C P F C G+C + C
Sbjct: 860 QCRGTLQCIDGKDLCDGFEDCEDGSDETNDTQGPCNPQTCDKKLHFVCN-GRCYQRALLC 918
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
C DGSD+ N + C + + C S +CI W+ D +DC D D++DE
Sbjct: 919 SSIAYC-SDGSDQLNCEHNTCNSNEFTCEKSGRCIQLTWVNDGVIDCGPD---DSSDESL 974
Query: 285 DKF--------------------------------------HQCFNGQVQCALSKKCIPH 306
D + H+C +G+ C C
Sbjct: 975 DLYSGSKCPEFDCGNGRCRQFSDICDGLDNCGNNADEAACEHECGHGERYCR-PIGCYGD 1033
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSH------NAVLCHPNELRCGSSNQCVALSKFC 360
+CD DC +D D + + K +H C E C +C+ C
Sbjct: 1034 MHICDGVNDC--EDFSDEANCNQTKSDNHPLSGWKELGECATFEFACADPFECIPEFLRC 1091
Query: 361 DGKPDCSNGEDE---GPFCNNKADC-ENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVD- 415
DG C + DE K D E + C H C + C D
Sbjct: 1092 DGINHCYDKTDELNCTHIHPTKFDMNETVICEHPDRLCGFSNKCITVSQLCDGNNDCEDT 1151
Query: 416 -------ADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
ADE G C C NT Y+CSC L+P+GK C+
Sbjct: 1152 TDEGFLCADELCEQGHECSHNCHNTPEGYICSCPPHLYLQPNGKRCS 1198
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL IDY LYW D T+E+ R++G V
Sbjct: 3960 LENGILVASLDGNNKKSLVERDVGWPISLSIDYPTGRLYWADYRKGTIETCRLNGKDRNV 4019
Query: 164 L 164
+
Sbjct: 4020 V 4020
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+ M GE R + T + WP+ L +DY Q +YW D+ +++ S + DGS + V
Sbjct: 1390 RIERCSMAGEGRRIISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTKYDGSEHHV 1449
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1450 VLRNKEI 1456
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+++A + G ++ +I+ P++L +D Q LYW D+ L+ +E DG++ VL H
Sbjct: 2343 IQRAYLTGYGVERIIRTDIKMPNALTLDLEQQQLYWADARLDKIERANYDGTNRVVLAH 2401
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 25/38 (65%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
+C GQ +CA S KCIP NWLCD E DC DI D T+
Sbjct: 26 KCNEGQFRCAQSLKCIPSNWLCDGEYDCGKGDISDETN 63
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 7/108 (6%)
Query: 62 FNHRNQSLCFIQQQNVSSVRL---RCAQINDLLNSWDLPAPEIFPLD--ERLEKAGMHGE 116
F + N + ++ V+ RL + AQ + L+ D +F D L +A + G
Sbjct: 288 FLNENDGMVYLCTNAVTFCRLILQQVAQPSSLV--LDPTKGYLFYTDWSPGLSRALLDGS 345
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
NR+ LV+ I SS+ +D + +YW D + + +E V DG L
Sbjct: 346 NRTTLVSTQIYHLSSVTLDLASEHVYWIDVYKDVIERVNYDGQQRWAL 393
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 108 LEKAGMHGENRSPLVTKN-----IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
+ A M G ++ L+TK+ + +P SL +D +YWCDS L T+E +++DG+
Sbjct: 671 IYSAWMDGTHKE-LLTKSSEELPMHFPRSLDVDRRTKRIYWCDSKLGTIERIKLDGTGRE 729
Query: 163 VL 164
+L
Sbjct: 730 LL 731
>gi|195565939|ref|XP_002106552.1| GD16065 [Drosophila simulans]
gi|194203931|gb|EDX17507.1| GD16065 [Drosophila simulans]
Length = 1626
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 641 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 700
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 701 CDGIPDC-NDGSDEVGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 754
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 755 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 802
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 803 VPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDCPNGSDEGEGCD-LAECEHQAGQCSSF 861
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + CVD++EC G C Q CTNT SY CSCT+GY L P
Sbjct: 862 CQKTPNGALCVCPPGSEIGEDGFTCVDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEP 921
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 922 NKHTCKAVN 930
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + + QC S +CIP N+ CD+E
Sbjct: 527 FTCNNQRCIPKSWLCDGDDDCLDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQEN 585
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD------- 320
DC DN+DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 586 DCG-----DNSDEQECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGDFCAEK 639
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C N+ +C QCV S
Sbjct: 640 TCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESY 699
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 700 KCDGIPDCNDGSDE 713
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 244 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 303
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQ--WPSS 131
+ V I + WD PA + +A G LV KN+ WP+
Sbjct: 304 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGL--LVFKNVTLGWPNG 351
Query: 132 LVIDYNQDILYWCDSHLNTVESVRVDGS 159
L ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 352 LSIDFKEDRVYWCDALLDHVQHANLDGT 379
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1073 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1132
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1133 SSHYLLHPHSL 1143
>gi|307171853|gb|EFN63508.1| Low-density lipoprotein receptor-related protein 2 [Camponotus
floridanus]
Length = 4578
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 121/345 (35%), Positives = 159/345 (46%), Gaps = 61/345 (17%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM-GKCIPE 220
V C N+ C ++N+C+ + CD + DC + DEG FC + C+ QF+C G CIP+
Sbjct: 1069 VTCSANQFAC-ANNRCIPATWKCDSENDCGDSSDEGEFCAMKTCSYFQFTCPRSGHCIPQ 1127
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC D DE + C + Q CA K C+ ++ CD DC +D D
Sbjct: 1128 SWVCDGDSDCF-DQQDEMDCPPVTCLSTQFTCADQKMCVLASYKCDGISDC--NDGSDEV 1184
Query: 281 DEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDC----------------------- 316
QC + Q +C S CIP +W CD DC
Sbjct: 1185 GCPSLAPDQCNVDKQFRCVSSAICIPRSWYCDGTADCPDKSDEPETCGKVDCQTGFFRCR 1244
Query: 317 ------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS--------SNQCVAL 356
DD D +DED + + C P +C S +N CV +
Sbjct: 1245 NERCVFKAYICDGKDDCGDGSDEDTELH------ACGPPAFKCESQQWSCPNVTNVCVNV 1298
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAGQ--NPNKTQ 412
S CDGK DC NG DEGP C+ A+C + CS+ C TP GA C CPAG+ +
Sbjct: 1299 STVCDGKLDCPNGADEGPGCD-FAECNHQSGLCSNGCIRTPLGAQCVCPAGEELTSDGYT 1357
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C D +EC G C Q C NT SY C+C +GYTL+ D +C A N
Sbjct: 1358 CQDMNECETPGRCSQICVNTKGSYFCNCVDGYTLQKDKHTCKAYN 1402
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/340 (34%), Positives = 165/340 (48%), Gaps = 45/340 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---- 216
C ++ CG + C+ + CD DC +G DE +C P F C +G
Sbjct: 49 CDVGQITCGQYSFNKTYCIPPHQRCDMTVDCVDGTDEDGCTYRKCQPDDFRC-VGTTPEL 107
Query: 217 CIPESWKCDGFVDCLEDGSDEP---NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP+ KCDG++DC +G DE N C Q +C +++C+ N CD DC
Sbjct: 108 CIPKEKKCDGYLDC-RNGRDEERCENNMKPACRLDQFRCNTTQRCVEQNVRCDHRDDCG- 165
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DED F C + Q +CA + CIP + CD DC D +DE+
Sbjct: 166 ----DNSDEDHCNFPPCTSDQFRCA-NALCIPIAYKCDGYKDCQ-----DGSDEE----- 210
Query: 334 SHNAVLCHPNELRC--GSSNQ--CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
S +C N+ C G++ + C+ S+ CD K DC +G DEG C+ C++L C H
Sbjct: 211 SCTMTVCPGNKFMCPKGANGKPLCINRSQLCDEKQDCEDGADEGATCSMSM-CDSLGCQH 269
Query: 390 KCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC +P G C+CP G+ N ++T C+D DEC G C+Q C NT SY+C C GY L
Sbjct: 270 KCQASPIGGTCYCPEGRILANDSRT-CIDRDECSEWGFCEQLCENTDGSYICHCASGYIL 328
Query: 447 RPDGKSCTAVNVP------QDEPASIIFSSTVDIRRIHLN 480
K C A N+ + A S+T + RRI N
Sbjct: 329 HGRNK-CRAQNISVLELLLAQDRAVWRLSATGEDRRIIAN 367
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 152/363 (41%), Gaps = 87/363 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2792 CPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPIHCAQRTCPQNSFRCPNHRCIPATW 2851
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +DN
Sbjct: 2852 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2905
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + + C +K +CIP WLCD + DC VD DE+
Sbjct: 2906 SDED--ERHQCNDRKCDEETEFTCTANKMWNRAQCIPKKWLCDGDPDC-----VDGADEN 2958
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN---------K 379
+ + C N+ C ++ +C+ + CD DC +G DEG CN+ +
Sbjct: 2959 VTIHNCPSPPTCGENQFTC-NNGRCLNRNWMCDHDNDCGDGSDEGKMCNSHYKSCINNQE 3017
Query: 380 ADCENLKCSHK--------------------------CSPTPRGAMCFCPAGQNPNKTQC 413
C+N KC K P P+ MC A N +Q
Sbjct: 3018 FTCQNFKCIRKQFRCDGQDDCGDYSDEVGCPSRTKNTTCPNPKDFMC---ANGNCIDSQL 3074
Query: 414 V---------DADE---CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
V D+DE C +D C C +T S+ C C GY L DGK+C
Sbjct: 3075 VCNKVSDCADDSDEPLHCNVDECAHIEMNQCGHKCVDTPTSFYCECNPGYKLLADGKACD 3134
Query: 455 AVN 457
++
Sbjct: 3135 DID 3137
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 147/343 (42%), Gaps = 43/343 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPFCN-AEC-TPGQFSCGMGK---- 216
C + C + N C+ CDG DC ++ EDE CN +C +F+C K
Sbjct: 2877 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDERHQCNDRKCDEETEFTCTANKMWNR 2935
Query: 217 --CIPESWKCDGFVDCLEDGSDEPNTCIHQC------FNGQVQCALSKKCIPHNWLCDEE 268
CIP+ W CDG DC+ DG+DE N IH C Q C + +C+ NW+CD +
Sbjct: 2936 AQCIPKKWLCDGDPDCV-DGADE-NVTIHNCPSPPTCGENQFTCN-NGRCLNRNWMCDHD 2992
Query: 269 MDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D +DE + C N Q + KCI + CD + DC D +
Sbjct: 2993 NDCG-----DGSDEGKMCNSHYKSCINNQEFTCQNFKCIRKQFRCDGQDDCG-----DYS 3042
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCE 383
DE + N +P + C + N C+ C+ DC++ DE CN A E
Sbjct: 3043 DEVGCPSRTKNTTCPNPKDFMCANGN-CIDSQLVCNKVSDCADDSDEPLHCNVDECAHIE 3101
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSC 440
+C HKC TP C C G + C D DEC+ C Q C NT Y C C
Sbjct: 3102 MNQCGHKCVDTPTSFYCECNPGYKLLADGKACDDIDECIETPQVCSQQCENTPGGYYCKC 3161
Query: 441 TEG-YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
E Y D +C + Q ++F++ +R + ++ S
Sbjct: 3162 NERWYEREADEHTCKRRDNIQ---PWVVFTNKYYVRNMSVDAS 3201
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 93/201 (46%), Gaps = 19/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +CV S CDG+ DC + DE C C+ +F C G+C+P ++ CD DC
Sbjct: 1000 ANQRCVPKSWVCDGENDCLDNSDEMQNCTKPTCSTNEFQCKSGRCVPMTFHCDTENDC-G 1058
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCF 291
D SDE C Q CA + +CIP W CD E DC D++DE ++ C
Sbjct: 1059 DYSDEVGCPNVTCSANQFACA-NNRCIPATWKCDSENDCG-----DSSDEGEFCAMKTCS 1112
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1113 YFQFTCPRSGHCIPQSWVCDGDSDC-----FDQQDE-----MDCPPVTCLSTQFTCADQK 1162
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1163 MCVLASYKCDGISDCNDGSDE 1183
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM 214
DG C + RCG ++ C+ CDG+ DC +G DE C C G F C
Sbjct: 3493 DGKTCIANCTAGQHRCGLPDEKCIPWYWRCDGEKDCKDGSDESTSCPPRNCRSGMFQCTN 3552
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G C P CDG DC D SDE C +C + +C + +CI +W CD + DC
Sbjct: 3553 GNCTPSVTICDGVDDC-GDRSDEAK-CALECGELEFKCKSNGRCIHDSWKCDGDADCK-- 3608
Query: 275 DIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED K C + KCIP W+CD + DC D++DE
Sbjct: 3609 ---DGSDEDSLTCKKENCDASTEFSCKNGKCIPKLWMCDSDNDCG-----DDSDEPAYMC 3660
Query: 333 FSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
N C RC G +N +C+ FCDGK DC +G DE P
Sbjct: 3661 RQKN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDERP 3701
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 150/331 (45%), Gaps = 30/331 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + +C+A CD + DC + DE C F C G CI +C
Sbjct: 3751 CSESEFKC-KNGKCIASRWRCDSEDDCGDNSDEQECHRWVCKHESFQCTSGHCIASYLRC 3809
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STDDIVDNTD 281
DG DC D SDE C + + G C S+ +C +N LC D TDD DN+D
Sbjct: 3810 DGARDC-RDMSDELG-CPPR-YPGGKYCPQSRFEC--NNRLCVSLTDICDGTDDCGDNSD 3864
Query: 282 EDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
E+ F + + QCA + KCI LCD D+ D +DE+ +
Sbjct: 3865 ENPSMCTNFECDTHRRFQCA-NHKCIARYQLCD-----GIDNCGDASDENNMTMCVKHTR 3918
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENLKCSHKC-SPT 394
C P ++ +C+A ++ CD DC + DE C++ C + C+H+C + T
Sbjct: 3919 PCDPISEYTCANKKCIARTRLCDLADDCGDLSDE-LGCHHTHHCSMNDRGGCAHECHNIT 3977
Query: 395 PRGAMCFCPAGQ--NP-NKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDG 450
G +C C G +P N+ CVD DEC D C CTN + SY CSC +G+ L
Sbjct: 3978 NGGYICACYPGYIISPDNRKHCVDVDECQTDQHQCSHICTNLNGSYTCSCRQGFQLSDRH 4037
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
V +D+ ++F++ ++R L
Sbjct: 4038 SGVCRV---EDDNIVVLFANGPELRAYDLRA 4065
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 104/225 (46%), Gaps = 20/225 (8%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNAEC--TPGQFS 211
R D + A+ C E +C S+ +C+ S CDG DC +G DE C E +FS
Sbjct: 3571 RSDEAKCALECGELEFKCKSNGRCIHDSWKCDGDADCKDGSDEDSLTCKKENCDASTEFS 3630
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDE 267
C GKCIP+ W CD DC +D SDEP Q C G +C + +CIP CD
Sbjct: 3631 CKNGKCIPKLWMCDSDNDCGDD-SDEPAYMCRQKNCTTGWQRCPGHANYRCIPKWLFCDG 3689
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC D +DE + +C + +C+P WLCD DC D +DE
Sbjct: 3690 KDDCR-----DGSDERPENCPKCDPDMDFKCTNNRCVPKQWLCDFADDCG-----DGSDE 3739
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C +E +C + +C+A CD + DC + DE
Sbjct: 3740 A-EVMCKNKYRECSESEFKC-KNGKCIASRWRCDSEDDCGDNSDE 3782
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSHNA 162
+ E++E++ + G NR L++ I +P ++ + ++ +YW D L V + + G+
Sbjct: 2541 VREKIERSDLEGNNRKILISATI-YPFAITV--FREHIYWTDLQLRGVYRAEKYTGADKI 2597
Query: 163 VLCH-----PNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
L P +L S+ N C CD G +C S +E
Sbjct: 2598 ELVKRLEDSPRDLHIFSASRQQCTVNPCNINKGGCDQSCHPSHNGSAECKCDDNSKLVNE 2657
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C P +FSC G+CI W CDG DC + + C H C + +C
Sbjct: 2658 DRMCVPKNVTCDPNKFSCRNGRCISRMWACDGDDDCGDGSDENTRYCSYHSCSPNEFRCN 2717
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2718 -NGRCIFKTWKCDHENDCR-----DGSDEEGCVYPPCAMGEFTCA-NYRCIPQSQVCNGI 2770
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C N L+C +N CV CDG DC + DE
Sbjct: 2771 NDCKDNFTSDETHERCPR-----NTTCPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2825
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2826 PIHCAQRTCPQNSFRCPNHRCIPA 2849
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 141/375 (37%), Gaps = 99/375 (26%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ WD PA + +A G N + WP+ L ID+N+D LYWCD+ L+
Sbjct: 787 FFSEWDRPA--------NISRAHADGSNLVVFRNLTLGWPNGLAIDFNKDRLYWCDALLD 838
Query: 150 TVESVRVDGS-----HNAVLCHPNEL--------------------------------RC 172
V+ +DG+ ++ ++ HP + R
Sbjct: 839 HVQHSNLDGTDVRTVNSRLIRHPFSIAIHEDWMYITDWRLDAIIRLHKETGEQEAILVRE 898
Query: 173 GSSNQCVALSKF-----------------------CDGKPDCSNGEDEGPFCNAECTPGQ 209
++N+ + F C PD S+ D F + + P +
Sbjct: 899 PATNRLYGVKVFSREIQIMMISHPCTINNGGCEKLCFAIPDNSSHSDGIVFPDIQSIPPR 958
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
G E + DG C D EP C H CA +++C+P +W+CD
Sbjct: 959 LIQVCGCPYGERLQDDG-RSCAADPDGEPPLQACPH---TWDFTCA-NQRCVPKSWVCDG 1013
Query: 268 EMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
E DC +DN+DE + C + QC S +C+P + CD E DC
Sbjct: 1014 ENDC-----LDNSDEMQNCTKPTCSTNEFQCK-SGRCVPMTFHCDTENDCG--------- 1058
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
D+ V C N+ C ++N+C+ + CD + DC + DEG FC K
Sbjct: 1059 -DYSDEVGCPNVTCSANQFAC-ANNRCIPATWKCDSENDCGDSSDEGEFCAMKT------ 1110
Query: 387 CSHKCSPTPRGAMCF 401
CS+ PR C
Sbjct: 1111 CSYFQFTCPRSGHCI 1125
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 79/164 (48%), Gaps = 18/164 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEE 268
F+C +C+P+SW CDG DCL D SDE C C + QC S +C+P + CD E
Sbjct: 997 FTCANQRCVPKSWVCDGENDCL-DNSDEMQNCTKPTCSTNEFQCK-SGRCVPMTFHCDTE 1054
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C Q CA + +CIP W CD E DC D++DE
Sbjct: 1055 NDCG-----DYSDEVGCPNVTCSANQFACA-NNRCIPATWKCDSENDCG-----DSSDE- 1102
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + C + C S C+ S CDG DC + +DE
Sbjct: 1103 -GEFCAMKT--CSYFQFTCPRSGHCIPQSWVCDGDSDCFDQQDE 1143
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 120/290 (41%), Gaps = 77/290 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP+S C
Sbjct: 2709 CSPNEFRC-NNGRCIFKTWKCDHENDCRDGSDEEGCVYPPCAMGEFTCANYRCIPQSQVC 2767
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2768 NGINDCKDNFTSDETHERCPRNTTCPLNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2822
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2823 DENPIHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2882
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C ++
Sbjct: 2883 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-ERHQCNDRKCDEETEFTCTANKMWNR 2935
Query: 352 -QCVALSKFCDGKPDCSNGEDEG---------PFCN-NKADCENLKCSHK 390
QC+ CDG PDC +G DE P C N+ C N +C ++
Sbjct: 2936 AQCIPKKWLCDGDPDCVDGADENVTIHNCPSPPTCGENQFTCNNGRCLNR 2985
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 108/290 (37%), Gaps = 26/290 (8%)
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
IF D L+ A + G NR +V P I D +YW D +L +
Sbjct: 3355 RIFWADAHLDYIAFADLEGHNRR-IVLSGSSVPHVFAITVFDDFIYWTDWNLKAISKAEK 3413
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMG 215
+ R + L + P N C + G G
Sbjct: 3414 FSGDRLKMLRNTTHRPYDIHIYHPLRQLPYNNPCAQNNGGCSHLCLIAPPASSYLLEGYG 3473
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTD 274
+ ++KC + D + TCI C GQ +C L +KCIP W CD E DC
Sbjct: 3474 QPGVTTYKCKCPNQFILD--KDGKTCIANCTAGQHRCGLPDEKCIPWYWRCDGEKDCK-- 3529
Query: 275 DIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C +G QC + C P +CD DD D +DE
Sbjct: 3530 ---DGSDESTSCPPRNCRSGMFQCT-NGNCTPSVTICD-----GVDDCGDRSDE------ 3574
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ A+ C E +C S+ +C+ S CDG DC +G DE K +C+
Sbjct: 3575 AKCALECGELEFKCKSNGRCIHDSWKCDGDADCKDGSDEDSLTCKKENCD 3624
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV + I PS+L IDY + LYW D L+T+E++ + G++ ++
Sbjct: 4200 KIEIAWMDGDRRKLLVIERIASPSALTIDYAMEHTLYWSDVKLDTIEAINLSGTNRRIVL 4259
Query: 166 HPNELRCGSSNQCVALSKF 184
R G VAL F
Sbjct: 4260 RIGAPRIGIFRHPVALDVF 4278
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ +++ DGS
Sbjct: 1545 RIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFIDTCLYDGSKRIQVLA 1604
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1605 GSHYLLHPHSL 1615
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G N SP+VT I P L ID+ +YW DS L+T++ V G + ++
Sbjct: 2185 RIGKAFLDGSNWSPIVTSGISTPRDLTIDFATHDIYWVDSKLDTIQKVSYTGGNREII 2242
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L IDY D ++W D+HL+ + ++G +
Sbjct: 3317 LQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEGHNR 3376
Query: 162 AVL 164
++
Sbjct: 3377 RIV 3379
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ KA M G + ++ K++ PS L IDY+ +LYW D+ +E ++G++
Sbjct: 2496 FGTSGKIFKATMAGSLKRAIIDKDLSQPSGLAIDYDDRMLYWTDAVREKIERSDLEGNNR 2555
Query: 162 AVL 164
+L
Sbjct: 2556 KIL 2558
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 105/275 (38%), Gaps = 55/275 (20%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
+ C Q C S CIP +W+CD + DC +D+ + L+ +
Sbjct: 1108 MKTCSYFQFTCPRSGHCIPQSWVCDGDSDC------------FDQQDEMDCPPVTCLSTQ 1155
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRSP 120
F +Q +C + +C I+D + D + P + P ++K +
Sbjct: 1156 FTCADQKMCVL-------ASYKCDGISDCNDGSDEVGCPSLAPDQCNVDK-------QFR 1201
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVA 180
V+ I P S ++CD + + + V C RC + +CV
Sbjct: 1202 CVSSAICIPRS----------WYCDGTADCPDKSDEPETCGKVDCQTGFFRC-RNERCVF 1250
Query: 181 LSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---------CIPESWKCDGFVDCL 231
+ CDGK DC +G DE +A C P F C + C+ S CDG +DC
Sbjct: 1251 KAYICDGKDDCGDGSDEDTELHA-CGPPAFKCESQQWSCPNVTNVCVNVSTVCDGKLDCP 1309
Query: 232 EDGSDEPN----TCIHQ---CFNGQVQCALSKKCI 259
+ P C HQ C NG ++ L +C+
Sbjct: 1310 NGADEGPGCDFAECNHQSGLCSNGCIRTPLGAQCV 1344
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD DK+ + N T + N + +Q+Q + V + + + + ++
Sbjct: 1386 VDGYTLQKDKHTCKAYNHTTAFLIISNRHTILVADLQEQALERVPINVENV--VATASNM 1443
Query: 97 PAPEIFPLDERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L++ G + +++ + L D+ LYW DS LNT+E
Sbjct: 1444 HTGTIFWSDMKLKRISRLDRGSDPQDIISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVA 1503
Query: 155 RVDGSHNAVLCHPN 168
+ G +L N
Sbjct: 1504 KETGIGRMILVKEN 1517
>gi|391338536|ref|XP_003743614.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Metaseiulus occidentalis]
Length = 4584
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/389 (32%), Positives = 173/389 (44%), Gaps = 85/389 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E +C +S +CVALS CDG DC +G DE NA C +F+C G+C+P SWKC
Sbjct: 1046 CSVREFKC-ASGRCVALSFKCDGDNDCGDGSDESGCTNATCNANEFACENGRCVPLSWKC 1104
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDC------------ 271
D DC DGSDE + C + C + Q C+ S CIP NW+CD + DC
Sbjct: 1105 DSENDC-GDGSDEGDFCTDKTCSSTQFACS-SGACIPKNWVCDGDTDCNDKDDEKNCPPA 1162
Query: 272 -----------------------STDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIP 305
D D +DE ++C + QC + CIP
Sbjct: 1163 VCTVSQFSCENKRQCIHDSYRCDGIPDCADGSDEKNCPSRAPNECDSNSFQCKSPRICIP 1222
Query: 306 HNWLCDEEMDC-----------------------------------STDDIVDNTDEDWD 330
+W CD DC DD D +DE
Sbjct: 1223 KSWRCDGHKDCDDGSDEPDTCPRGVCPANHFKCDNGKCIYKSWVCDGNDDCGDQSDEHER 1282
Query: 331 KYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCS 388
A++C ++ C + +++C+ + C+GK DC +G DEGP C++ K D E + C+
Sbjct: 1283 HACKQKALICPYDQWACPNVTDRCINNTLVCNGKFDCPDGLDEGPVCDSGKCDPEAVGCT 1342
Query: 389 HKCSPTPRGAMCFCPAGQNPNK-TQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTL 446
HKC TP G +C C AG+ N T CVD DEC + G+C Q C NT SY C C GY
Sbjct: 1343 HKCIQTPMGPVCTCRAGERLNSTTTCVDLDECTELVGACSQHCFNTKGSYTCKCDPGYLE 1402
Query: 447 RP-DGKSCTAVNVPQDEPASIIFSSTVDI 474
P + C A + Q A ++ S+ I
Sbjct: 1403 DPANHHKCKAADRSQ---AYLVISNRRSI 1428
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 140/300 (46%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C P E C +S+ C+ CD DC++G DE G CG G IP
Sbjct: 78 CGPKEFSCQLYKFNSSYCIPAHLRCDRIRDCADGSDEQNCDYRSHQEGDHKCGSGLSIPP 137
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG++DC ++ ++ T +C QC KCI + +CD DC D +
Sbjct: 138 EKKCDGYIDCRDESDEDGCTNSTRCLRTMFQCDDKSKCIATSLVCDHHTDCP-----DAS 192
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C GQ +CA +++C+P W CD DC D +DE + C
Sbjct: 193 DEKNCTYPACTPGQFRCA-NQQCMPERWRCDGHFDCK-----DKSDE-----LNCTQRFC 241
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
N+ C + C+ +K CDGK DCS+G DE C + C +L C C P+ +G C
Sbjct: 242 SDNKFLCPTEKVCIDRTKICDGKEDCSDGADEKLNCTSTL-CPSLSCQQGCRPSLQGGEC 300
Query: 401 FCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C G N K C+D +EC G CDQ C N+ SY CSCT GY L D C A++
Sbjct: 301 TCNLGMRINPEDKRSCIDLNECEEWGYCDQLCQNSPGSYKCSCTAGYELH-DKVGCKAID 359
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 152/308 (49%), Gaps = 36/308 (11%)
Query: 195 EDEGPFCNA-ECTP-GQFSCGMGK------CIPESWKCDGFVDCLEDGSDEPNTCIH--- 243
ED CN+ EC P +F+C K CIP+ W CDG DC+ D +DE + ++
Sbjct: 2917 EDARHQCNSRECDPEKEFTCKKNKMWNRPTCIPKRWLCDGDPDCV-DAADEDSKTLNCPT 2975
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALS 300
C Q +CA + +CI +W CD + DCS D +DE + F +C + + C +
Sbjct: 2976 PEPCKEKQFRCA-NGRCINQDWYCDHDNDCS-----DGSDEPKNCTFRECTSDEFACR-N 3028
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
KC+ N++CD E DC D +DE N+ +C ++C+ L+K C
Sbjct: 3029 AKCVRKNYMCDGEDDCG-----DGSDE-LQANCKRNSTCDEATHHKCRLDDRCIPLTKVC 3082
Query: 361 DGKPDCSNGEDEGPFCNNK--ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
D DCS+G DE P CN A E+ C HKC TP C C G P+ C+D
Sbjct: 3083 DKNRDCSDGSDESPRCNINECATPESNGCEHKCVDTPLSYRCECNPGYKLMPDGKACIDV 3142
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC + C Q C NT S+ C C E + LR PDGK+C + EP I+FS+ +
Sbjct: 3143 DECTEMLSVCSQICVNTPGSFFCKCNETHYLREPDGKTCKRLET-YPEPW-IVFSNRYYL 3200
Query: 475 RRIHLNGS 482
R ++G+
Sbjct: 3201 RNASIDGT 3208
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/333 (31%), Positives = 147/333 (44%), Gaps = 40/333 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + +C+ CD DC +G DE N +C QF C G CI + C
Sbjct: 3755 CSESEFQC-ENKRCIPRKWRCDHDADCDDGSDEKNCANHKCRADQFQCDSGHCIQKKMVC 3813
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
DG DC D SDE N C + NG Q QC + CI +++CD + DC D
Sbjct: 3814 DGNKDC-RDVSDEKN-CPPRFPNGRHCPENQFQCN-NTVCIKPDYVCDRDDDCG-----D 3865
Query: 279 NTDEDWD--KFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
N+DE + H+C + QCA ++KCI LCD E +C D +NT D+
Sbjct: 3866 NSDESDQTCRQHECDVTRKFQCA-NRKCIMLWQLCDGEDNCG-DGSDENTFHLCDRI--K 3921
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE---NLKCSHKCS 392
+ C + +C QC+ +K CD DC + DE C + C N C H C+
Sbjct: 3922 GPLTCSADMFKCADGRQCIDKNKVCDHNLDCDDESDE-LGCREYSRCSPPLNGGCQHNCT 3980
Query: 393 ----PTPRGAMCFCPAGQNPNKTQ---CVDADECLID-GSCDQTCTNTHLSYVCSCTEGY 444
+ +C CP+G N T C D DEC C C NT SY C C
Sbjct: 3981 SLGASSAHDYVCVCPSGYRINATNTKTCADIDECASSLHYCAHICHNTVGSYGCEC---- 4036
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RP K P +P I++++ ++R +
Sbjct: 4037 --RPGFKRVNMDCHPPGDPPVIMYTNGREVRLV 4067
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 135/339 (39%), Gaps = 79/339 (23%)
Query: 108 LEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+ + GM G N + L+T KN+ WP++L IDY D ++W D+HL+ +E +G + +
Sbjct: 3329 IGRLGMDGSNMTLLITYRKNLVWPNALTIDYFSDKIFWADAHLDYIEYADFEGKNRHTV- 3387
Query: 166 HPNELRCGSSNQCVALSKFCD------------GKPDCSNGEDEGPFCNAECTPGQFSC- 212
L ALS F D + GED NA P
Sbjct: 3388 ----LSGSKVPHVFALSVFDDWLFWTDWNMKGIYRAHKFTGEDLLLLRNASHRPYDIHVY 3443
Query: 213 ----------------------------GMGKCIPESWKCDGFVDCLEDGSDEPN--TCI 242
G P +C C ED PN TCI
Sbjct: 3444 HPLRQLPYNNPCEVDNGGCSHLCLLSPNPAGLKFPAEHRCA----CPEDFVLLPNNRTCI 3499
Query: 243 HQCFNGQVQCALS--KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C GQ +C+ +KCIP W+CD E DC+ D +DE ++C GQ QC S
Sbjct: 3500 ANCTEGQKRCSGGGDEKCIPIYWMCDGEQDCA-----DASDEQNCPPYKCKRGQFQCPTS 3554
Query: 301 KK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVALSK 358
C+ +CD DC D Y N L C N +C S+ +CV S
Sbjct: 3555 SDVCVSRIKVCDGHNDCP------------DGYDERNCHLPCGENSFKCNSTGRCVPSSW 3602
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCE---NLKCSH-KCSP 393
CDG DC++G DE P + +C+ + KC + KC P
Sbjct: 3603 QCDGDNDCADGSDESPALCHHGNCDPETHFKCENGKCIP 3641
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 91/197 (46%), Gaps = 18/197 (9%)
Query: 159 SHNAVLCHPNELRCGSSN------QCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQF 210
++ +C P + C S+ +C+ CD DC + DE P +C C+P +F
Sbjct: 2664 ANEGKMCVPENVTCDSTKFACKNGKCIDRRYACDSDDDCGDQSDEDPAYCTVHTCSPSEF 2723
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CG GKC+ WKCD DC D SDE + C +G+ CA + KCIP N +CD D
Sbjct: 2724 RCGNGKCLQLKWKCDHENDC-GDNSDEIDCKYPPCADGEFTCA-NFKCIPKNQMCDGRDD 2781
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D + + K C QV+CA + C WLCD + DC DN+DE
Sbjct: 2782 CKDGKATDESHDHCPKNRTCPGQQVKCATTNICAEPFWLCDGDNDCG-----DNSDE-VS 2835
Query: 331 KYFSHNAVLCHPNELRC 347
S C PN RC
Sbjct: 2836 TLCSQRT--CPPNSFRC 2850
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 110/268 (41%), Gaps = 37/268 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C +CA + KCI W+CD++ DC D +DE + G + +
Sbjct: 38 CAPNHFRCA-NGKCIHQLWVCDQQADCE-----DGSDEHQGCPPPKC--GPKEFSCQLYK 89
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
N S C LRC +I D + D D R + G H
Sbjct: 90 FNSSYCI-------PAHLRCDRIRDCADGSDEQN-----CDYRSHQEGDH---------- 127
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
+ S L I + CD +++ + DG N+ C +C ++C+A S
Sbjct: 128 --KCGSGLSIPPEKK----CDGYIDCRDESDEDGCTNSTRCLRTMFQCDDKSKCIATSLV 181
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
CD DC + DE CTPGQF C +C+PE W+CDG DC +D SDE N
Sbjct: 182 CDHHTDCPDASDEKNCTYPACTPGQFRCANQQCMPERWRCDGHFDC-KDKSDELNCTQRF 240
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
C + + C K CI +CD + DCS
Sbjct: 241 CSDNKFLCPTEKVCIDRTKICDGKEDCS 268
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 105/261 (40%), Gaps = 72/261 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTP-GQFSCGMGKCIPES 221
C N +C S+ +CV S CDG DC++G DE P + C P F C GKCIP
Sbjct: 3584 CGENSFKCNSTGRCVPSSWQCDGDNDCADGSDESPALCHHGNCDPETHFKCENGKCIPHL 3643
Query: 222 WK--------------------------------------------CDGFVDCLEDGSDE 237
W CDG DC D SDE
Sbjct: 3644 WFCDFDDDCGDNSDEPAYQCRNRNCTTGWQKCPSKSNYRCIPQWLFCDGRDDC-RDNSDE 3702
Query: 238 --PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW----DKFHQCF 291
P+ C G +C+ + +CIP W CD E DC DN+DED + + C
Sbjct: 3703 TNPDQCPKCHPTGDFKCS-NGRCIPMRWRCDFEDDCG-----DNSDEDSTMCENLYRDCS 3756
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+ QC +K+CIP W CD + DC D +DE +H C ++ +C S
Sbjct: 3757 ESEFQCE-NKRCIPRKWRCDHDADCD-----DGSDE--KNCANHK---CRADQFQC-DSG 3804
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
C+ CDG DC + DE
Sbjct: 3805 HCIQKKMVCDGNKDCRDVSDE 3825
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 84/204 (41%), Gaps = 59/204 (28%)
Query: 210 FSCGMGKCIPESW----------------------------------------KCDGFVD 229
F+CG +CIP++W KCDG D
Sbjct: 1011 FTCGNQRCIPKNWVCDGDDDCLDGSDEHQNCKGNTCSVREFKCASGRCVALSFKCDGDND 1070
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFH 288
C DGSDE C + C + +C+P +W CD E DC D +DE D+
Sbjct: 1071 C-GDGSDESGCTNATCNANEFACE-NGRCVPLSWKCDSENDCG-----DGSDEGDFCTDK 1123
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C + Q C+ S CIP NW+CD + DC+ D N +C ++ C
Sbjct: 1124 TCSSTQFACS-SGACIPKNWVCDGDTDCNDKDDEKNCP----------PAVCTVSQFSCE 1172
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ QC+ S CDG PDC++G DE
Sbjct: 1173 NKRQCIHDSYRCDGIPDCADGSDE 1196
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 108/246 (43%), Gaps = 46/246 (18%)
Query: 165 CHPNELRC--GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK--CIPE 220
C + RC G +C+ + CDG+ DC++ DE +C GQF C C+
Sbjct: 3502 CTEGQKRCSGGGDEKCIPIYWMCDGEQDCADASDEQNCPPYKCKRGQFQCPTSSDVCVSR 3561
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC DG DE N C C +C + +C+P +W CD + DC+ D +
Sbjct: 3562 IKVCDGHNDC-PDGYDERN-CHLPCGENSFKCNSTGRCVPSSWQCDGDNDCA-----DGS 3614
Query: 281 DE----------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DE D + +C NG KCIPH W CD + DC N+DE
Sbjct: 3615 DESPALCHHGNCDPETHFKCENG--------KCIPHLWFCDFDDDCGD-----NSDEPAY 3661
Query: 331 KYFSHNAVLCHPNELRCGSSN--QCVALSKFCDGKPDCSNGEDEG-----PFCNNKAD-- 381
+ + N C +C S + +C+ FCDG+ DC + DE P C+ D
Sbjct: 3662 QCRNRN---CTTGWQKCPSKSNYRCIPQWLFCDGRDDCRDNSDETNPDQCPKCHPTGDFK 3718
Query: 382 CENLKC 387
C N +C
Sbjct: 3719 CSNGRC 3724
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 118/308 (38%), Gaps = 76/308 (24%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ ++ M G N++ +V+ N+ PS L +DY LYW D+ +E +DG+ L
Sbjct: 2511 KIYRSTMAGNNKTAIVSGNLTQPSGLAVDYEDRKLYWTDALREKIERSNLDGTDREELI- 2569
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----------NAECTPGQFSCGMG 215
++ A++ F GP+ AE G +
Sbjct: 2570 ------SATIYPFAITVF-------------GPYIYWTDLQLRGVYRAEKHTGAGMIEIA 2610
Query: 216 KCI-----------PESWKCDGFV------DCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
K + PE KC+ V C + PN +C K C
Sbjct: 2611 KRLEESPRDIHIFAPERQKCNKTVCEINNGGCAQSCHPGPNGPECRCTGNLKIANEGKMC 2670
Query: 259 IPHNWLCDE-EMDC-------------STDDIVDNTDED--WDKFHQCFNGQVQCALSKK 302
+P N CD + C S DD D +DED + H C + +C + K
Sbjct: 2671 VPENVTCDSTKFACKNGKCIDRRYACDSDDDCGDQSDEDPAYCTVHTCSPSEFRCG-NGK 2729
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+ W CD E DC DN+DE KY C E C ++ +C+ ++ CDG
Sbjct: 2730 CLQLKWKCDHENDCG-----DNSDEIDCKYPP-----CADGEFTC-ANFKCIPKNQMCDG 2778
Query: 363 KPDCSNGE 370
+ DC +G+
Sbjct: 2779 RDDCKDGK 2786
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 144/368 (39%), Gaps = 45/368 (12%)
Query: 37 VDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIND---L 90
V+ DW + YF GT + N R+ I N+ R N
Sbjct: 758 VEGIALDWVTKNLYFVDSRKGTMVV---INTRDTQQRKILMSNLRRPRAIVVHPNKGYIF 814
Query: 91 LNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
+ WD PA + +A + G N+ + ++ WP+ L IDY D +YWCD+ L+
Sbjct: 815 YSVWDRPA--------NISRAHLDGTNQQVVRGVSLGWPNGLAIDYELDRVYWCDALLDH 866
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFC---DGKPDCSNGEDEGPFCNAECTP 207
++ +DGS + + ++ + +F D + D +G + + P
Sbjct: 867 IQHSNLDGS-DVQTVNVTGVQLKHTFSLTIHKEFIYVTDWRIDAIAKIHKGSGQSVKVLP 925
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKC-IPHNW-L 264
CI K + +D + C CF ++ KC P N+ L
Sbjct: 926 LLEEGSRLFCIKVFSKDNQLIDANHPCLNNNGGCAKFCFGVPTADGGMTAKCGCPTNYVL 985
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
++ +C+ D D + C N +++CIP NW+CD + DC
Sbjct: 986 SADQKNCTADPKADPAPK------ACPNSWDFTCGNQRCIPKNWVCDGDDDCLDGSD--- 1036
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NK 379
++ + C E +C +S +CVALS CDG DC +G DE N N+
Sbjct: 1037 ------EHQNCKGNTCSVREFKC-ASGRCVALSFKCDGDNDCGDGSDESGCTNATCNANE 1089
Query: 380 ADCENLKC 387
CEN +C
Sbjct: 1090 FACENGRC 1097
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E G+ G R ++ I WP+ L +D +Y+ DS L+ ++ DG+
Sbjct: 1557 RIESVGLDGSMRRTIIDTRIFWPNGLTLDLPTKRVYFADSKLDYIDFCNYDGTGRQQVLA 1616
Query: 160 HNAVLCHPNEL 170
HN L HP+ L
Sbjct: 1617 HNHYLLHPHSL 1627
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A M NR+ +V ++I PS + +D +YW D ++ +ES R DGS+ L
Sbjct: 2201 KIERALMDCTNRTSIVVEDIISPSDIAVDIASGDIYWVDKRVDRLESCRFDGSNRRTL 2258
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
N+ + +D+ A +IF L M G+ + +++ + L +D+ LYW DS
Sbjct: 1457 NNTIYWFDMNAKKIFKL--------MKGKELTTVISSGLDLIEGLAVDWIASNLYWVDSK 1508
Query: 148 LNTVESVRVDGSHNAVLCHPN 168
L T+E ++G ++ +L + N
Sbjct: 1509 LKTIEVSNLEGKNHIILLNSN 1529
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 107 RLEKAGMHGENRSPLVTK--NIQWPSSLVIDY--NQDILYWCDSHLNTVESVRVDGSHNA 162
++E + + G R +++ + P LVIDY LYW D L+T+ES R DGS
Sbjct: 4211 KIETSWLDGSRRQTILSSKNRVISPGGLVIDYVSGDRRLYWVDPKLSTIESARPDGSGRL 4270
Query: 163 VL----CHPNEL 170
V+ HP L
Sbjct: 4271 VIKNQTVHPIAL 4282
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCI--PESWKCD 225
+C ++C+ L+K CD DCS+G DE P CN EC + + KC+ P S++C+
Sbjct: 3068 KCRLDDRCIPLTKVCDKNRDCSDGSDESPRCNINECATPESNGCEHKCVDTPLSYRCE 3125
>gi|345781659|ref|XP_532820.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Canis lupus familiaris]
Length = 2029
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/349 (32%), Positives = 159/349 (45%), Gaps = 70/349 (20%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
LRC + +C+ CDG DC + +DE +A+C+ +F C G+C+ S +CDG D
Sbjct: 834 LRCDNKTRCIPRIWLCDGNADCLDKKDEQGCIHAKCSAPEFRCKSGQCVSHSLRCDGNRD 893
Query: 230 CLEDGSDE--PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----- 282
CL+ +E P QC +G+V+C S +C+P WLCD ++DC D TDE
Sbjct: 894 CLDHSDEEGCPVAWPVQCPSGEVKCRRSGECVPAAWLCDRDLDCK-----DGTDEKNMGL 948
Query: 283 ---DWDKFH------------------------------------QCFNGQVQCALSKKC 303
+ H +C + Q CA C
Sbjct: 949 VVPEGSGMHLKVQDYGRGTDVPSPPLVGPAPEPECPSQDCGPEELRCGSRQWPCAGGDPC 1008
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
+P W CD + DC D++DE C +E +C S+ C+ L CDGK
Sbjct: 1009 VPDVWRCDGQRDCG-----DSSDE-----AGCPPKKCQSSEFQC-RSHGCLDLRLVCDGK 1057
Query: 364 PDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECL 420
DC++G DEG C++ + C CSH C +PRG +C C G + C D DEC
Sbjct: 1058 EDCADGSDEGGKCSSLLSACSQAPCSHTCYLSPRGPVCACERGFELESSGQVCKDVDECQ 1117
Query: 421 IDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
G C QTC NT SY C+C GY+L PDG +C A + EP ++
Sbjct: 1118 KSGGQPCSQTCVNTQGSYSCTCQPGYSLEPDGHTCKATGI---EPILLV 1163
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 114/255 (44%), Gaps = 25/255 (9%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLC 265
P + C GKCI SW CDG DCL DGSDE N + GQ QC +C LC
Sbjct: 88 PQAWQCDDGKCISSSWLCDGAGDCL-DGSDEANCELSTPCPGQTAQCPGRPQCGDAWELC 146
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ D D +E + C GQ QC +K C+ +W C+ DC D++
Sbjct: 147 EGRKDWE-----DGLEEARCSPNCCLAGQWQCR-NKVCVEASWKCNGVNDCG-----DSS 195
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DED C +RC +C+ S CDG+ DC +G DE C N
Sbjct: 196 DED-------ACASCPDGMVRC-DEGKCIPESLVCDGEADCRDGTDEPATCGKNCSLANG 247
Query: 386 KCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTE 442
C +CS T G C C AG P+ C D DEC L G C Q C N SY C+C +
Sbjct: 248 GCEGQCSVTTWGVQCSCGAGWQLQPDGQSCADIDECSLAYGPCGQLCRNVPGSYSCACIQ 307
Query: 443 GYTLRPDGKSCTAVN 457
GY L +G SC +
Sbjct: 308 GYQLY-NGTSCRVTD 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 156 VDGSHNA-----VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
+DGS A C +C QC + C+G+ D +G +E C GQ+
Sbjct: 112 LDGSDEANCELSTPCPGQTAQCPGRPQCGDAWELCEGRKDWEDGLEEARCSPNCCLAGQW 171
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C C+ SWKC+G DC D SDE + C C +G V+C KCIP + +CD E D
Sbjct: 172 QCRNKVCVEASWKCNGVNDC-GDSSDE-DACA-SCPDGMVRCD-EGKCIPESLVCDGEAD 227
Query: 271 CSTDDIVDNTDE 282
C D TDE
Sbjct: 228 CR-----DGTDE 234
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E AGM G +R L N++ P L +D+ LYW + ++E+V VDGS
Sbjct: 402 IEAAGMDGSDRKVLAAVNVEEPVGLTLDHVAGRLYWISEYKESIETVNVDGS 453
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 41/202 (20%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFN 63
QC +G+V+C S +C+P WLCD ++DC D TDE
Sbjct: 910 QCPSGEVKCRRSGECVPAAWLCDRDLDCK-----DGTDE--------------------- 943
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSP--L 121
+N L + + ++ D D+P+P PL + ++ P L
Sbjct: 944 -KNMGLVVPEGSGMH------LKVQDYGRGTDVPSP---PLVGPAPEPECPSQDCGPEEL 993
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVAL 181
+ QWP + D+ + CD + +S G C +E +C S+ C+ L
Sbjct: 994 RCGSRQWPCAGGDPCVPDV-WRCDGQRDCGDSSDEAGCPPKK-CQSSEFQC-RSHGCLDL 1050
Query: 182 SKFCDGKPDCSNGEDEGPFCNA 203
CDGK DC++G DEG C++
Sbjct: 1051 RLVCDGKEDCADGSDEGGKCSS 1072
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 14/83 (16%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
+LC P+ + C S +CV CDGK DC +G DEG +C SP+P
Sbjct: 736 LLCTPSSVPCRSGERCVPQEYVCDGKRDCRDGSDEG-------NCSQFCARPGLSPSPVQ 788
Query: 398 AMCFCPAGQNPNKTQCVDADECL 420
+ P QC++ ++C+
Sbjct: 789 S-------SMPGVFQCLNGNQCI 804
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 60/167 (35%), Gaps = 38/167 (22%)
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------------DWD 285
P T C V C ++C+P ++CD + DC D +DE
Sbjct: 731 PLTRRLLCTPSSVPCRSGERCVPQEYVCDGKRDCR-----DGSDEGNCSQFCARPGLSPS 785
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPN 343
G QC +CI + CD CS D +DE W P+
Sbjct: 786 PVQSSMPGVFQCLNGNQCIEEKYHCDGAQQCS-----DGSDELGCW-----------KPS 829
Query: 344 E---LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ LRC + +C+ CDG DC + +DE + K +C
Sbjct: 830 DDCSLRCDNKTRCIPRIWLCDGNADCLDKKDEQGCIHAKCSAPEFRC 876
>gi|347963623|ref|XP_310784.4| AGAP000331-PA [Anopheles gambiae str. PEST]
gi|333467112|gb|EAA06237.5| AGAP000331-PA [Anopheles gambiae str. PEST]
Length = 4655
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 118/320 (36%), Positives = 157/320 (49%), Gaps = 26/320 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ E +K
Sbjct: 1144 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCLANQFKCADLRQCVEEPYK 1203
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P +QC +C S CIP W CD DC D+
Sbjct: 1204 CDGIPDC-NDGSDELGCPTMEPNQCNLEKHFRCRSSGVCIPIAWHCDGSNDCD-----DH 1257
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ C NG +CA + KC+ ++CD + DC D +DE +
Sbjct: 1258 SDEEDCSKITCPNGFYKCA-NAKCVFKAYICDGKDDCG-----DGSDESVEHACVTPPQR 1311
Query: 340 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPR 396
C + C G + +CV L+ CD PDC NG DEG C+ A C++ CS+ C TP
Sbjct: 1312 CAHGQWACPGVTERCVNLTSVCDDVPDCPNGADEGLGCD-LAQCQHQTGLCSNGCQKTPL 1370
Query: 397 GAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
GA+C CP G+ P+ C D +EC G C Q CTNT SY CSC +GY L P+ +C
Sbjct: 1371 GALCICPPGEELAPDNFTCKDLNECDPPGLCSQRCTNTKGSYFCSCVDGYVLEPNKHTCK 1430
Query: 455 AVNVPQDEPASIIFSSTVDI 474
AVN P A +I S+ I
Sbjct: 1431 AVNHPA---AFLIISNRHSI 1447
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 130/403 (32%), Positives = 182/403 (45%), Gaps = 83/403 (20%)
Query: 144 CDSHLNTVE--SVRVDGS----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
C+ L+T++ +V V GS V C +C +C+ + C+ + DC GEDE
Sbjct: 8 CEFILSTLQPAAVWVGGSIFSNETDVPCPFGTFKC-PEGKCIPQTSVCNYQKDCDKGEDE 66
Query: 198 GPFCNA-ECTPGQFSCGM-----GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ 251
C EC PGQ SCG CIP +KCD +DC+ DG+DE + +C ++
Sbjct: 67 LNHCPPPECEPGQISCGQYVFNKTYCIPPHYKCDMTIDCV-DGTDESDCTYRKCQTDDIR 125
Query: 252 CA-----------LSKKCIPHNWLCDEEMDCST--------------------------- 273
C +++ C+P CD +DC T
Sbjct: 126 CGAPSLGVSLNGRVAEICVPKEKRCDGYLDCRTGKDEEGCPGTACRLDQFRCANGVRCID 185
Query: 274 --------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+D DN+DE F C GQ +CA + CIP + CD DCS D +
Sbjct: 186 TALKCNHKNDCGDNSDEVGCNFPPCHGGQFRCA-NALCIPATFHCDGYHDCS-----DES 239
Query: 326 DEDWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DE + A+ C N+ C G N +C+ SK CDGK DC +G DE C+ +
Sbjct: 240 DE-----ANCTAIACPDNKFLCPRGGPNGQAKCIVKSKLCDGKRDCDDGTDEETACSTTS 294
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C L C HKC P+ G +C+CPAG+ +P+ C D DEC + G CDQ CTNT S+ C
Sbjct: 295 -CPALGCEHKCGPSLTGGVCYCPAGRTLSPDNRTCADLDECTVWGHCDQLCTNTDGSFSC 353
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+C GYTL + C A P + F+ I R+ +G
Sbjct: 354 ACATGYTLM-EKTRCVA---PTASSLELFFAYDRAILRMSAHG 392
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 156/422 (36%), Gaps = 122/422 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------- 199
C PN L+C +N CV CDG DC + DE P
Sbjct: 2822 CPPNHLKCDRTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQNSFRCPNHRCIPATW 2881
Query: 200 -----------------FCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
+C +E C F+C G CIP + CDG DCL D SDE N
Sbjct: 2882 YCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCDNGNCIPRIYICDGDNDCL-DNSDEDN 2940
Query: 240 TCIHQC------FNGQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
HQC + + C +K +CIP W+CD + DC VD DE+ H
Sbjct: 2941 R--HQCNDRKCDEDTEFTCHENKAWARAQCIPKKWICDGDPDC-----VDGADENTTLQH 2993
Query: 289 -----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----------KYF 333
C CA + +CI W+CD + DC D +DE + + F
Sbjct: 2994 CPSPQPCGEDMFTCA-NGRCINQGWVCDHDNDCG-----DGSDEGKNCNSQYKTCTPQEF 3047
Query: 334 SHNAVLCHPNELRCGSSN----------------------------QCVALSKFCDGKPD 365
+ C N+ RC + QC+ C+ PD
Sbjct: 3048 TCQNFKCIRNQYRCDGEDDCGDHSDEVGCKKDNATCAEGKFTCNNGQCIDYHLVCNKVPD 3107
Query: 366 CSNGEDEGPFCNNK--ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL- 420
C++ DE CN A E +C HKC T C C G + C D DEC+
Sbjct: 3108 CTDESDEPLHCNVDECAKVEIHRCGHKCVDTLTSYYCDCNQGYKLLEDGKACADIDECIE 3167
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G C Q C+NT Y C C E Y R D +C + D +IFS+ +R +
Sbjct: 3168 TPGVCSQHCSNTPGGYYCKCDERYYERQNDEHTCKRKD---DTKPWLIFSNKYYVRNMST 3224
Query: 480 NG 481
+G
Sbjct: 3225 DG 3226
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/273 (35%), Positives = 124/273 (45%), Gaps = 53/273 (19%)
Query: 165 CHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
C + RCG ++ C+ CDG+PDC + DE C A C G F CG G C P +
Sbjct: 3536 CTSGQHRCGGDDEKCIPWFWKCDGEPDCKDRSDEPASCPARHCRAGTFQCGNGNCTPSTT 3595
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DG+DE N C C +C S +CI +W CD + DC D +DE
Sbjct: 3596 ICDGTDDC-GDGTDEQN-CDLPCPVSDFKCKSSGRCILDSWKCDGDADCK-----DGSDE 3648
Query: 283 DWDKFHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D + H+ C NG +CIP W+CD + DC D++DE
Sbjct: 3649 DPEICHKRTCDPETEFSCKNG--------RCIPKLWMCDFDNDCG-----DDSDEPAYMC 3695
Query: 333 FSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CEN 384
N C RC G SN +C+ FCDGK DC + DE P CN + D C N
Sbjct: 3696 RQRN---CTTGWSRCPGQSNYRCIPKWLFCDGKDDCRDKSDELPENCPQCNQETDFKCNN 3752
Query: 385 LKCSHKCSPTPRGAMC----FCPAGQNPNKTQC 413
+C PR MC C G + ++TQC
Sbjct: 3753 NRC------IPRQWMCDFADDCGDGSDESETQC 3779
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 143/324 (44%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV--------- 154
+ E++E++ + G NR L++ I +P ++ + N +YW D L V
Sbjct: 2571 VREKIERSQLDGRNREVLISATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGAGVH 2627
Query: 155 ----RVDGSHNAVLCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGEDE 197
R++ S + + + +N C+ + C +GKP+C + +E
Sbjct: 2628 EMVKRLEDSPRDIHIYSATRQQCQANPCLQNNGGCAQSCHPGANGKPECKCDDTTKPVNE 2687
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC + ++ N C H C + +CA
Sbjct: 2688 GRMCAPKNHTCDASKFYCQNGKCISRMWSCDGDDDCGDGSDEDVNYCAFHSCAANEFRCA 2747
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE+ + C +G+ CA + +CIP +C+
Sbjct: 2748 -NGRCIFKSWKCDHENDCK-----DGSDEEGCSYPPCVDGEFTCA-NGRCIPQAQVCNGV 2800
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C PN L+C +N CV CDG DC + DE
Sbjct: 2801 NDCKDNGTSDETHER-----CPTNTTCPPNHLKCDRTNICVEPYWLCDGDNDCGDNSDEN 2855
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2856 PLHCAQRTCPQNSFRCPNHRCIPA 2879
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 131/328 (39%), Gaps = 66/328 (20%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
++N+C+ CD DC +G DE G + EC+ +F C GKCI W+CD
Sbjct: 3751 NNNRCIPRQWMCDFADDCGDGSDESETQCKGKY--RECSESEFRCDNGKCISSRWRCDHE 3808
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----- 282
DC D SDE QC NG QC S CI + CD + DC D +DE
Sbjct: 3809 DDC-GDNSDEYGCEGFQCKNGTFQCK-SGHCIAAYFRCDGDRDCR-----DMSDEIGCPP 3861
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---------------------- 320
+ C + QCA + +P + LCD DC +
Sbjct: 3862 RFPGGRYCPESRFQCANNLCVLPSD-LCDGTDDCGDNSDEAASVCTNFNCDTLRRFQCAN 3920
Query: 321 --------IVDNTDEDWDKYFSHNAVLCHPNELRCG-------SSNQCVALSKFCDGKPD 365
I D D D +N LC + C ++ +C+ ++ CD D
Sbjct: 3921 HRCVARYQICDGVDNCGDGSDENNMTLCAARQKPCDLYTQYQCANKKCIDRAQVCDYADD 3980
Query: 366 CSNGEDEGPFCNNKADCENLK---CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADEC 419
C +G DE C+ A C L C H C G +C C AG NK +C D DEC
Sbjct: 3981 CGDGSDE-LGCHRTASCSALNKGGCEHHCVNLTDGYICACYAGFIIDASNKKRCTDIDEC 4039
Query: 420 LIDG-SCDQTCTNTHLSYVCSCTEGYTL 446
C CTN + +Y C C EG+ L
Sbjct: 4040 ATGTHGCSHLCTNLNGTYECGCREGFRL 4067
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 90/200 (45%), Gaps = 50/200 (25%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + QC S +CIP N+ CD+E
Sbjct: 1030 FTCNNQRCIPKSWICDGDDDCLDNSDEEQNCTKPTCGTNEFQCK-SGRCIPLNFRCDQEN 1088
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDD--- 320
DC D++DE +C G V CA S+ +CIP+ W CD E DC
Sbjct: 1089 DCG-----DHSDE-----FEC--GNVTCAASQFACENGRCIPNIWKCDSENDCGDGSDEG 1136
Query: 321 --------------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQ 352
+ D D+ +DK + + C N+ +C Q
Sbjct: 1137 PFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCLANQFKCADLRQ 1196
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV CDG PDC++G DE
Sbjct: 1197 CVEEPYKCDGIPDCNDGSDE 1216
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 104/219 (47%), Gaps = 27/219 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPE 220
A C +CG+ N C + CDG DC +G DE C+ C F C G+CI +
Sbjct: 3575 ARHCRAGTFQCGNGN-CTPSTTICDGTDDCGDGTDE-QNCDLPCPVSDFKCKSSGRCILD 3632
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC +DGSDE P C + + + + + + +CIP W+CD + DC D
Sbjct: 3633 SWKCDGDADC-KDGSDEDPEICHKRTCDPETEFSCKNGRCIPKLWMCDFDNDCG-----D 3686
Query: 279 NTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3687 DSDEPAYMCRQRNCTTGWSRCPGQSNYRCIPKWLFCDGKDDCR-----DKSDE-----LP 3736
Query: 335 HNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C + +C ++N+C+ CD DC +G DE
Sbjct: 3737 ENCPQCNQETDFKC-NNNRCIPRQWMCDFADDCGDGSDE 3774
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 124/316 (39%), Gaps = 81/316 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 2739 CAANEFRC-ANGRCIFKSWKCDHENDCKDGSDEEGCSYPPCVDGEFTCANGRCIPQAQVC 2797
Query: 225 DGFVDCLEDG-SDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++G SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2798 NGVNDCKDNGTSDETHERCPTNTTCPPNHLKCDRTNICVEPYWLCDGDNDCG-----DNS 2852
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2853 DENPLHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCGDGADEPPEYCKSEGRTCFGDLF 2912
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------DKYFSHNAVLCHPNELRCGS 349
C + CIP ++CD + DC +DN+DED K CH N + +
Sbjct: 2913 TCD-NGNCIPRIYICDGDNDC-----LDNSDEDNRHQCNDRKCDEDTEFTCHEN--KAWA 2964
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNP 408
QC+ CDG PDC +G D EN H SP P G M C G+
Sbjct: 2965 RAQCIPKKWICDGDPDCVDGAD-----------ENTTLQHCPSPQPCGEDMFTCANGRCI 3013
Query: 409 NKTQCVDADECLIDGS 424
N+ D D DGS
Sbjct: 3014 NQGWVCDHDNDCGDGS 3029
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C +GQ +C +KCIP W CD E DC D +DE C G QC
Sbjct: 3531 TCIANCTSGQHRCGGDDEKCIPWFWKCDGEPDCK-----DRSDEPASCPARHCRAGTFQC 3585
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD TDD D TDE + + C ++ +C SS +C+ S
Sbjct: 3586 G-NGNCTPSTTICD-----GTDDCGDGTDE------QNCDLPCPVSDFKCKSSGRCILDS 3633
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P +K C+
Sbjct: 3634 WKCDGDADCKDGSDEDPEICHKRTCD 3659
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R P++T+ I+ P+ L +DY+QD +YW D+ LNT+E ++ DG+ +
Sbjct: 4234 KIEVSWMDGSKRRPIITEAIRHPAGLTVDYSQDHAVYWVDTKLNTIEVMKPDGTMRRTVL 4293
Query: 166 HPNELR 171
+ L+
Sbjct: 4294 KGDLLK 4299
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3350 LQAYIAKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIYWADAHLDYIAFADLEGRHR 3409
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
V+ L ALS F D
Sbjct: 3410 HVV-----LSGARVPHVFALSIFDD 3429
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 6/118 (5%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
YF + + + + + ++ N + L I LL D +P
Sbjct: 2160 YFTNVFPHENYVEVAWLDGTHRKVLVKTTNDAPRELAVNPIKRLLYWIDYGQ---YP--- 2213
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ K + G N +P+VT I P L +D +YW DS L+ ++ V G H V+
Sbjct: 2214 RIGKCFLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKVSYSGGHRQVI 2271
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQ 75
+ N E + S ++ V+ DW + Y+ GT + + RN S +
Sbjct: 747 VHRNGTGREIVLASQNEGVEGLAVDWVSKNLYYIDSRKGTLNV---LSTRNTSYRRTLLK 803
Query: 76 NVSSVRLRCAQIND---LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N+ R N + WD PA + +A G + WP+ L
Sbjct: 804 NLKRPRAIVVHPNRGYIYFSEWDRPA--------NISRANADGSGLIVFRNLTLGWPNGL 855
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 856 SIDFREDRVYWCDALLDHVQHANLDGT 882
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + ++ +++ PS L IDY+ +LYW D+ +E ++DG +
Sbjct: 2526 FGTSGKIFRTTMAGSLKRAIIDRDLSQPSGLAIDYDDRMLYWTDAVREKIERSQLDGRNR 2585
Query: 162 AVL 164
VL
Sbjct: 2586 EVL 2588
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 27 EEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQS-LCFIQQQNVSSVRLRCA 85
+E+ + D+V+ DW L+ + +E H N S + ++N++ R C
Sbjct: 1499 QEIISTGLDLVEGLAYDWIGQNLYWLD-SKLNTIEVAHENGSNRLVLVRENITQPRGMCL 1557
Query: 86 QINDLLNSWDLPAPE---IFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ 138
P+P +F D R+E+ GM G R +V+ I WP+ L +D
Sbjct: 1558 D----------PSPTAKWLFWTDWGENPRIERIGMDGTMRETIVSTKIYWPNGLTLDVAT 1607
Query: 139 DILYWCDSHLNTVESVRVDGS 159
+Y+ DS L+ ++ +G+
Sbjct: 1608 QRVYFADSKLDFIDFCYYNGT 1628
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 57/134 (42%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD + +K+ + +N + N + + +++Q + V + + + + ++
Sbjct: 1417 VDGYVLEPNKHTCKAVNHPAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNM 1474
Query: 97 PAPEIFPLDERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L+K P +++ + L D+ LYW DS LNT+E
Sbjct: 1475 HTGTIFWSDMKLKKISRLDRGMEPQEIISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVA 1534
Query: 155 RVDGSHNAVLCHPN 168
+GS+ VL N
Sbjct: 1535 HENGSNRLVLVREN 1548
>gi|194769742|ref|XP_001966960.1| GF21799 [Drosophila ananassae]
gi|190622755|gb|EDV38279.1| GF21799 [Drosophila ananassae]
Length = 4648
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1148 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 1208 CDGIPDC-NDGSDELGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 1261
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1262 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 1309
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS+
Sbjct: 1310 VPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDCPNGSDEGEGCD-LAECEHQAGRCSNF 1368
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + C+D +EC G C Q CTNT SY CSCT+GY L P
Sbjct: 1369 CQKTPNGALCVCPPGSEIGEDGYTCIDTNECDPPGLCSQQCTNTKGSYFCSCTDGYILEP 1428
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1429 NKHTCKAVN 1437
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 119/343 (34%), Positives = 162/343 (47%), Gaps = 48/343 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAE--CTP 207
C +L CG + C+ CD DC + DE FCN+ P
Sbjct: 71 CETPQLNCGQYVFNKTYCIPPHYRCDMIEDCEDKSDEAQCTYRKCQHTDVFCNSASGAAP 130
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
+ + +G C+P+ +CDG++DC G DE C Q +CA +KCI C+
Sbjct: 131 AEGARLIGPCVPKEKRCDGYLDC-RTGRDEEGCPGVACRLDQFRCASGQKCIDVALKCNH 189
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC DN+DE F QC + Q +C+ + CIP+N+ CD DC+ D +DE
Sbjct: 190 RDDCG-----DNSDEQGCNFPQCHHAQFRCS-NALCIPYNFHCDGYHDCA-----DKSDE 238
Query: 328 DWDKYFSHNAVLCHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ A+ C N+ C +C+ S+ CDGK DC +G DE C+ A C
Sbjct: 239 -----ANCTAIACPDNKFLCPRGGAQGTPKCILKSQLCDGKRDCEDGSDEETNCS-IASC 292
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L C KC P+ G +C+C GQ N N+T CVD DEC G CDQ CTNT SY C
Sbjct: 293 PALGCEFKCGPSLTGGVCYCKPGQSLSNDNRT-CVDLDECAEWGHCDQLCTNTLGSYTCQ 351
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C +GYTL D K C A P +IF+ + R+ +GS
Sbjct: 352 CAQGYTLINDSK-CIA---PDASNLQLIFAHDRAVMRMLAHGS 390
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 151/364 (41%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2829 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2888
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2889 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2942
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2943 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2995
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2996 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSTQEF 3054
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC ++C + CP GQ QC+D
Sbjct: 3055 TCQNFKCIRNQYRCDGEDDCGDHSDEVGCKKDNVTCPQGQFACTNGQCIDYSLVCNKYPD 3114
Query: 416 -ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ADE C +D C C +T Y C C EGY L DGK+C V+ +
Sbjct: 3115 CADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 3174
Query: 462 EPAS 465
+P +
Sbjct: 3175 QPGA 3178
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2914 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2969
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI W+C
Sbjct: 2970 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWIC 3026
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + + CD E DC
Sbjct: 3027 DHDNDCG-----DGTDEGKFCNSKYKTCSTQEFTCQ-NFKCIRNQYRCDGEDDCG----- 3075
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE K + V C + C ++ QC+ S C+ PDC++ DE CN A
Sbjct: 3076 DHSDEVGCK---KDNVTCPQGQFAC-TNGQCIDYSLVCNKYPDCADESDEPAHCNVDECA 3131
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYV 437
E +C HKC T G C C G + C D DECL G+C Q C+NT +
Sbjct: 3132 KVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFY 3191
Query: 438 CSCTEG-YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y + D +C + + P +IF++ +R + ++G
Sbjct: 3192 CKCDENHYERQNDEHTCKRKD---NIPPWLIFTNKYYVRNMSVDG 3233
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G+NR LV I +P ++ + N +YW D L V N V
Sbjct: 2578 VREKIERSDLDGQNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 2634
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R SS N C+ + C +GK +C + +E
Sbjct: 2635 EMVKRLEDSPRDIRIYSSDRQKCTVNPCMINNGGCAQSCHPVANGKTECKCDDSTKVVNE 2694
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++PN C H C + +C
Sbjct: 2695 GRMCAPRNNTCEASKFYCKNGKCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2754
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ C + +CIP +C+
Sbjct: 2755 -NGRCIFKSWKCDHENDCK-----DESDEIGCTYPPCVDGEFTCG-NGRCIPQAQVCNGV 2807
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2808 NDCKDNGTSDETLERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2862
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2863 PLHCGQRTCPTNSFRCPNHRCIPA 2886
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 150/339 (44%), Gaps = 50/339 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RCG+ +C++ CD + DC + DE +C G F C G CI ++C
Sbjct: 3792 CSESEFRCGNG-KCISSRWQCDHEDDCGDNSDEMHCEGYQCKNGTFQCASGHCIASYFRC 3850
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK------CIPHNWLCDEEMDCSTDDIVD 278
DG DC D SDE C + F G C S+ C+ + LCD TDD D
Sbjct: 3851 DGDRDC-RDMSDEVG-CPPR-FPGGRYCPESRYQCNNNLCVSLSDLCD-----GTDDCGD 3902
Query: 279 NTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+DED F+ + QC+ + +C+ +CD D+ D +DE+
Sbjct: 3903 GSDEDPSVCSDFNCDTLRRFQCS-NHRCVARYQICD-----GVDNCGDGSDEN------- 3949
Query: 336 NAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-- 386
N LC + C Q C+ S+ CD DC + DE C++ + C
Sbjct: 3950 NMTLCASKQKPCDLYTQYQCANKHCIERSQVCDFSDDCGDASDE-LGCHHVSSCSEQNRG 4008
Query: 387 -CSHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSC 440
C H C + T G +C C G NK +C D DECL +C C N + +Y CSC
Sbjct: 4009 GCQHHCHNLTDGGYICTCYPGYIIAPDNKKKCTDVDECLTRQHTCSHQCHNLNGTYSCSC 4068
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
EG+ L DG S V + E ++F++ +IR + L
Sbjct: 4069 REGFHLT-DGAS--GVCRAEKEDVILVFANGQEIRGLDL 4104
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + QC S +CIP N+ CD+E
Sbjct: 1034 FTCNNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGANEFQCR-SGRCIPQNFRCDQEN 1092
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD------- 320
DC DN+DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 1093 DCG-----DNSDEMECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGDFCAEK 1146
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C N+ +C QCV S
Sbjct: 1147 TCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESY 1206
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 1207 KCDGIPDCNDGSDE 1220
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 3622 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCYKRTCDPKTEFSCKNGRCIPQL 3681
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3682 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 3735
Query: 278 DNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + +C +C + +CIP W+CD DC D +DE+ D
Sbjct: 3736 DNSDELPENCPKCNPETDFKCG-NNRCIPKQWMCDFADDCG-----DASDEN-DAICKGR 3788
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C++ CD + DC + DE
Sbjct: 3789 YRDCSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3823
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/237 (34%), Positives = 104/237 (43%), Gaps = 42/237 (17%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C A C G F C C P + CDG DC
Sbjct: 3551 GKDEKCIPWFWKCDGEKDCKDGSDEPATCAARHCRAGTFQCKNTNCTPSATICDGVDDC- 3609
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-- 289
D SDE N C C +C S +CI +W CD + DC D +DED ++
Sbjct: 3610 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCYKRT 3663
Query: 290 --------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C NG +CIP W+CD + DC D++DE N C
Sbjct: 3664 CDPKTEFSCKNG--------RCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CT 3707
Query: 342 PNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
RC G SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 3708 TGWQRCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 3764
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 113/271 (41%), Gaps = 73/271 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC + DE C G+F+CG G+CIP++ C
Sbjct: 2746 CSPNEFRC-NNGRCIFKSWKCDHENDCKDESDEIGCTYPPCVDGEFTCGNGRCIPQAQVC 2804
Query: 225 DGFVDCLEDG-SDEP------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+G DC ++G SDE NT C ++C + C+ WLCD + DC
Sbjct: 2805 NGVNDCKDNGTSDETLERCPMNT---TCPANHLKCEKTNICVEPYWLCDGDNDCG----- 2856
Query: 278 DNTDED-------------------------W--------------------DKFHQCFN 292
DN+DED W + CF
Sbjct: 2857 DNSDEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFG 2916
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2917 DLFTCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKS 2969
Query: 352 ----QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2970 WQRAQCIPKKWICDGDPDCVDGADENTTLHN 3000
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 3538 CIANCTAGQHLCGGKDEKCIPWFWKCDGEKDC-KDGSDEPATCAARHCRAGTFQCK-NTN 3595
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE C +C S +CI +W CD + DC
Sbjct: 3596 CTPSATICD-----GVDDCGDRSDEQNCDL-PCPLSDFKCKSSGRCILDSWRCDGDADCK 3649
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED + C P + +C+ CD DC + DE +
Sbjct: 3650 -----DGSDEDPAVCYKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 3701
Query: 378 NKADC 382
+ +C
Sbjct: 3702 RQRNC 3706
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 4241 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 4300
Query: 166 HPNELR 171
++LR
Sbjct: 4301 KGDQLR 4306
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
SC G+ + E + C+ D S EP + C N +++CIP +W+CD + D
Sbjct: 1001 SCPYGERLAEDQRT-----CMPDPSAEPP--VQPCPNSWDFTCNNQRCIPKSWVCDGDDD 1053
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C +DN+DE+ + C + QC S +CIP N+ CD+E DC DN+DE
Sbjct: 1054 C-----LDNSDEEQNCTKPTCGANEFQCR-SGRCIPQNFRCDQENDCG-----DNSDE-- 1100
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
V C ++ C ++ +C+ CD + DC + DEG FC K
Sbjct: 1101 ---MECGNVTCGTSQFAC-ANGRCIPNMWKCDSENDCGDSSDEGDFCAEKT 1147
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C ++ RC S +C+ ++ C+ + DC + DE +C QF C CIP +
Sbjct: 164 GVACRLDQFRCASGQKCIDVALKCNHRDDCGDNSDEQGCNFPQCHHAQFRCSNALCIPYN 223
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDI 276
+ CDG+ DC D SDE N C + + C + KCI + LCD + DC
Sbjct: 224 FHCDGYHDC-ADKSDEANCTAIACPDNKFLCPRGGAQGTPKCILKSQLCDGKRDCE---- 278
Query: 277 VDNTDED 283
D +DE+
Sbjct: 279 -DGSDEE 284
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 3537 TCIANCTAGQHLCGGKDEKCIPWFWKCDGEKDCK-----DGSDEPATCAARHCRAGTFQC 3591
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 3592 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 3639
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 3640 WRCDGDADCKDGSDEDPAVCYKRTCD 3665
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3356 LQAYIAKMGMDGSNFTTILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 3415
Query: 162 AVL 164
+
Sbjct: 3416 HTV 3418
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G +PLVT I P L ID ++W DS L+T++ + +G++ V+
Sbjct: 2218 RIGKALLDGSKWTPLVTSGISMPRDLTIDMQTHDIFWVDSKLDTIQKISYNGANRKVI 2275
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 746 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 805
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 806 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGLLVFKNVTLGWPNGLS 855
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 856 IDFKEDRVYWCDALLDHVQHANLDGT 881
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K++ PS L IDY++ LYW D+ +E +DG +
Sbjct: 2533 FGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERKLYWTDAVREKIERSDLDGQNR 2592
Query: 162 AVL 164
+L
Sbjct: 2593 ELL 2595
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N T + N + + +++Q + V + + + + ++ IF
Sbjct: 1429 NKHTCKAVNHTAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1486
Query: 105 DERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K P ++T + L D+ LYW DS LNT+E +GS+
Sbjct: 1487 DMKLKKISRLDRGMEPQEIITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRL 1546
Query: 163 VLCHPN 168
VL N
Sbjct: 1547 VLVREN 1552
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1580 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1639
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1640 SSHYLLHPHSL 1650
>gi|281360654|ref|NP_001096924.2| megalin, isoform A [Drosophila melanogaster]
gi|272506047|gb|ABW09371.2| megalin, isoform A [Drosophila melanogaster]
Length = 4769
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1268 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 1327
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 1328 CDGIPDC-NDGSDEVGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 1381
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1382 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 1429
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 1430 VPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDCPNGSDEGEGCD-LAECEHQAGQCSSF 1488
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + C+D++EC G C Q CTNT SY CSCT+GY L P
Sbjct: 1489 CQKTPNGALCVCPPGSEIGEDGYTCIDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEP 1548
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1549 NKHTCKAVN 1557
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAEC-TPG 208
C +L CG + C+ CD DC + DE FCN P
Sbjct: 197 CETPQLNCGQYTFNKTYCIPPHYRCDMIEDCEDKSDEAQCTYRKCQHTDLFCNTPTGAPA 256
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+ + G C+P+ +CDG++DC G DE C Q +CA KCI C+
Sbjct: 257 EGARLTGPCVPKEKRCDGYLDC-RTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHR 315
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE F C + Q +C + CIP+N+ CD DC+ D +DE
Sbjct: 316 DDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DKSDE- 363
Query: 329 WDKYFSHNAVLCHPNELRC---GSSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ A+ C N+ C G+S +C+ S+ CDGK DC +G DE C+ A C
Sbjct: 364 ----ANCTAIACPDNKHLCPRGGASGTPKCILKSQLCDGKRDCEDGSDEETNCS-IASCP 418
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
L C KC P+ G +C+C GQ+ P+ CVD DEC G CDQ CTNT SY C C
Sbjct: 419 ALSCEFKCGPSLTGGVCYCKPGQSLAPDNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCA 478
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+GYTL D K C A P +IF+ I R+ +GS
Sbjct: 479 QGYTLINDSK-CIA---PDANNLQLIFAHDRAIMRMLPHGS 515
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 149/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2950 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 3009
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 3010 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 3063
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 3064 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 3116
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 3117 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEF 3175
Query: 382 -CENLKCSHK---------CSPTPRGAMCF-----CPAGQNP-NKTQCVD---------- 415
C+N KC C C CP GQ QC+D
Sbjct: 3176 TCQNFKCIRNQSRCDGEDDCGDHSDEVGCAKENITCPQGQFACTNGQCIDYNLVCNKYPD 3235
Query: 416 -ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ADE C +D C C +T Y C C EGY L DGK+C V+ +
Sbjct: 3236 CADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 3295
Query: 462 EPAS 465
+P +
Sbjct: 3296 QPGA 3299
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 147/332 (44%), Gaps = 52/332 (15%)
Query: 178 CVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK------CIPESWKC 224
C+ CDG DC + DE C+ E +F+C K CIP+ W C
Sbjct: 3047 CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKSWQRAQCIPKKWIC 3103
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
DG DC+ DG+DE NT +H C Q C + +CI W+CD + DC D
Sbjct: 3104 DGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWICDHDNDCG-----D 3155
Query: 279 NTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
TDE K+ C + C + KCI + CD E DC D++DE +
Sbjct: 3156 GTDEGKFCNSKYKTCSAQEFTCQ-NFKCIRNQSRCDGEDDCG-----DHSDE---VGCAK 3206
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCENLKCSHKCSP 393
+ C + C ++ QC+ + C+ PDC++ DE CN A E +C HKC
Sbjct: 3207 ENITCPQGQFAC-TNGQCIDYNLVCNKYPDCADESDEPAHCNVDECAKVEINQCGHKCVD 3265
Query: 394 TPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRP-D 449
T G C C G + C D DECL G+C Q C+NT + C C E Y R D
Sbjct: 3266 TLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQND 3325
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+C + P +IF++ +R + ++G
Sbjct: 3326 EHTCKRKD---KIPPWLIFTNKYYVRNMSVDG 3354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 157/377 (41%), Gaps = 76/377 (20%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIP 219
C+P + +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI
Sbjct: 3869 CNPETDFKCGN-NRCIPKQWMCDFADDCGDASDENEAVCKGRYRECSESEFRCGNGKCIS 3927
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC D SDE + +QC NG QCA S CI + CD + DC D+ D
Sbjct: 3928 SRWQCDHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCR--DMSDE 3983
Query: 280 TD--EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ C + QC + C+ + LCD TDD D +DED N
Sbjct: 3984 VGCPPRFPGGRYCPESRFQCN-NNLCVSLSDLCD-----GTDDCGDGSDEDPSVCSDFNC 4037
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------------------- 372
+C S+ +CVA + CDG +C +G DE
Sbjct: 4038 DTLR--RFQC-SNERCVARYQICDGVDNCGDGSDENNMTLCASKQKPCDLYTQYQCANKH 4094
Query: 373 ----GPFCNNKADC----ENLKCSH--KCSPTPRGA-------------MCFCPAG---Q 406
C+ DC + L C H CS RG +C C G
Sbjct: 4095 CIERSQVCDFSDDCGDASDELGCHHTSSCSEANRGGCQQHCHNLTDGGYICTCYPGYIIA 4154
Query: 407 NPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E
Sbjct: 4155 ADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLT-DGAS--GVCRAEKEDVI 4211
Query: 466 IIFSSTVDIRRIHLNGS 482
++F + +IR ++ + S
Sbjct: 4212 LLFVNGQEIRGLNWHKS 4228
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G+NR LV I +P ++ + N +YW D L V N V
Sbjct: 2699 VREKIERSDLDGQNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 2755
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R SS N C + C +GK +C + +E
Sbjct: 2756 EMVKRLEDSPRDIRIYSSDRQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDDSTKVVNE 2815
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 2816 GRMCAPRNNTCEASKFYCKNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2875
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 2876 -NGRCIFKSWKCDHENDCK-----DGSDELGCVYPPCVDGEFTCA-NGRCIPQAQVCNGV 2928
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2929 NDCKDNATSDETHERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2983
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2984 PLHCGQRTCPTNSFRCPNHRCIPA 3007
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 3743 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFSCKNGRCIPQL 3802
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3803 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 3856
Query: 278 DNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + +C +C + +CIP W+CD DC D +DE+ +
Sbjct: 3857 DNSDELPENCPKCNPETDFKCG-NNRCIPKQWMCDFADDCG-----DASDEN-EAVCKGR 3909
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C++ CD + DC + DE
Sbjct: 3910 YRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3944
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3672 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3730
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 3731 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 3784
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + + + +CIP W+CD + DC D++DE N C RC G
Sbjct: 3785 CDPKTEFSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 3836
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 3837 QSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 3885
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 2867 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCVYPPCVDGEFTCANGRCIPQAQVC 2925
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2926 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2980
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2981 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 3040
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 3041 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 3093
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 3094 AQCIPKKWICDGDPDCVDGADENTTLHN 3121
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + + QC S +CIP N+ CD+E
Sbjct: 1154 FTCNNQRCIPKSWLCDGDDDCLDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQEN 1212
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD------- 320
DC DN+DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 1213 DCG-----DNSDEQECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGDFCAEK 1266
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C N+ +C QCV S
Sbjct: 1267 TCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESY 1326
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 1327 KCDGIPDCNDGSDE 1340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 3659 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 3716
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE C +C S +CI +W CD + DC
Sbjct: 3717 CTPSATICD-----GVDDCGDRSDEQNCDL-PCPLSDFKCKSSGRCILDSWRCDGDADCK 3770
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED F C P + +C+ CD DC + DE +
Sbjct: 3771 -----DGSDEDPAVCFKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 3822
Query: 378 NKADC 382
+ +C
Sbjct: 3823 RQRNC 3827
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 4362 KIEVSWMDGSKRRPLITEMIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 4421
Query: 166 HPNELR 171
++LR
Sbjct: 4422 RGDQLR 4427
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 3658 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 3712
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 3713 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 3760
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 3761 WRCDGDADCKDGSDEDPAVCFKRTCD 3786
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ + R + + V C ++ RC + +C+ + C+ + DC + DE
Sbjct: 272 CDGYLD-CRTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHRDDCGDNSDEQGCNFP 330
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-----ALSKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + + KC
Sbjct: 331 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKHLCPRGGASGTPKC 389
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 390 ILKSQLCDGKRDCE-----DGSDEE 409
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3477 LQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 3536
Query: 162 AVL 164
+
Sbjct: 3537 HTV 3539
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G +PLVT I P L ID +YW DS L+T++ + +G++ ++
Sbjct: 2338 RIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGANRKII 2395
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 871 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 930
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 931 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGLLVFKNVTLGWPNGLS 980
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 981 IDFKEDRVYWCDALLDHVQHANLDGT 1006
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K++ PS L IDY++ LYW D+ +E +DG +
Sbjct: 2654 FGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLDGQNR 2713
Query: 162 AVL 164
+L
Sbjct: 2714 ELL 2716
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G +
Sbjct: 1700 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1759
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1760 SSHYLLHPHSL 1770
>gi|195350486|ref|XP_002041771.1| GM11364 [Drosophila sechellia]
gi|194123576|gb|EDW45619.1| GM11364 [Drosophila sechellia]
Length = 1676
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 708 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 767
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 768 CDGIPDC-NDGSDEVGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 821
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 822 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 869
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 870 VPPPFKCPHGQWQCPGISERCVNITSVCDDTPDCPNGSDEGEGCD-LAECEHQAGQCSSF 928
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + CVD++EC G C Q CTNT SY CSCT+GY L P
Sbjct: 929 CQKTPNGALCVCPPGSEIGEDGFTCVDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEP 988
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 989 NKHTCKAVN 997
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 134/264 (50%), Gaps = 27/264 (10%)
Query: 200 FCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
FCN P + + G C+P+ +CDG++DC G DE C Q +CA KC
Sbjct: 25 FCNTPTGAPAEGARLTGPCVPKEKRCDGYLDC-RTGRDEVGCSGVACRLDQFRCANGLKC 83
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
I C+ DC DN+DE F C + Q +C + CIP+N+ CD DC+
Sbjct: 84 IDAALKCNHRDDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA- 136
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRC---GSSN--QCVALSKFCDGKPDCSNGEDEG 373
D +DE + A+ C N+ C G+S +C+ S+ CDGK DC +G DE
Sbjct: 137 ----DKSDE-----ANCTAIACPDNKHLCPRGGASGTPKCILKSQLCDGKRDCEDGSDEE 187
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTN 431
C+ A C L C KC P+ G +C+C GQ+ P+ CVD DEC G CDQ CTN
Sbjct: 188 TNCS-IASCPALSCEFKCGPSLTGGVCYCKPGQSLAPDNRTCVDLDECAEWGHCDQLCTN 246
Query: 432 THLSYVCSCTEGYTLRPDGKSCTA 455
T SY C C +GYTL D + CTA
Sbjct: 247 TLGSYTCQCAQGYTLINDSQ-CTA 269
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+G+ P+ R S C + D + C CN T G +
Sbjct: 542 NGTDGVTTSSPSFGRLQSRCSCPYGERLADDQVSCIPDPVPSHQCNPASTHGTLP-ATSE 600
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CIP+SW CDG DCL+ +E N C + + QC S +CIP N+ CD+E DC
Sbjct: 601 CIPKSWLCDGDDDCLDYSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQENDCG---- 655
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD-------------- 320
DN+DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 656 -DNSDEQECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGDFCAEKTCAYFQF 713
Query: 321 -------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ D D+ +DK + + C N+ +C QCV S CDG PD
Sbjct: 714 TCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYKCDGIPD 773
Query: 366 CSNGEDE 372
C++G DE
Sbjct: 774 CNDGSDE 780
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ + R + + V C ++ RC + +C+ + C+ + DC + DE
Sbjct: 50 CDGYLD-CRTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHRDDCGDNSDEQGCNFP 108
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-----ALSKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + + KC
Sbjct: 109 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKHLCPRGGASGTPKC 167
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 168 ILKSQLCDGKRDCE-----DGSDEE 187
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 312 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 371
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 372 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGLLVFKNVTLGWPNGLS 421
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 422 IDFKEDRVYWCDALLDHVQHANLDGT 447
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1140 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1199
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1200 SSHYLLHPHSL 1210
>gi|296204605|ref|XP_002749340.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Callithrix jacchus]
Length = 4656
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 163/364 (44%), Gaps = 62/364 (17%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPES 221
V C +C S QC+ S CD DC +G DE C+ + C+ Q +C G+CIP
Sbjct: 65 VTCQQGYFKCQSDGQCIPNSWVCDRDQDCDDGSDELQHCSQSTCSSHQITCSSGQCIPGE 124
Query: 222 WKCDGFVDCLEDGSDEPN------------------------------------TCIHQC 245
++CD DC DG+DE + C C
Sbjct: 125 YRCDHVRDC-PDGADEKDCQYPTCEQLTCDNGACYNNSQKCDSKVDCRDYSDELNCTEIC 183
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
F+ + C S +CIP ++CD + DC D +DE + C Q C + +CI
Sbjct: 184 FHDEFSCG-SGECIPLTYICDRDNDCQ-----DGSDEHACNYPTCSGYQFTCP-NGRCIR 236
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
NW+CD E DC DN DED + H C P E C S +C+++ K CDG D
Sbjct: 237 QNWVCDGEDDCK-----DNGDEDGCESSPHGVDKCSPREWSCPESGRCISIYKVCDGVLD 291
Query: 366 CSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN---KTQCVDAD 417
C EDE G +C C L C ++C TP G +CFCP G N CV+ D
Sbjct: 292 CPGREDENSTTTGKYCGTTL-CSALNCQYQCHETPYGGVCFCPPGYIINHNDSRTCVEFD 350
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
+C I G CDQ C + ++C C EGY L G+ C A + + A +IFS+ D+
Sbjct: 351 DCQIWGICDQRCESRPGYHLCHCEEGYILE-HGQHCKANDSSGE--AFVIFSNGRDLLIG 407
Query: 478 HLNG 481
++G
Sbjct: 408 DIHG 411
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C ++ C +++C+ LS CDG DC +G DE C CT QF CG G KCI +
Sbjct: 1149 CQASQFNC-PNHRCIDLSFVCDGDRDCVDGSDE-VGCVLNCTASQFKCGSGDKCISITKH 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGDCIPKFWECDGHPDC-----LSGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFLCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGTFDCPNGTDESPLCNQNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP+G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPSGFVLANDSKT-CEDVDECDIPGSCSQQCYNMRGSFRCSCDTGYLLES 1423
Query: 449 DGKSCTAV 456
DG++C A
Sbjct: 1424 DGRTCKAA 1431
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 161/375 (42%), Gaps = 80/375 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C +E +C +S +C+ +CD + DCS+ DE C + C +F C G+CIP
Sbjct: 2864 CSSSEFQC-TSGRCIPQHWYCDEEADCSDASDEPASCGRQVRTCLSDEFKCDDGRCIPSE 2922
Query: 222 WKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-- 272
W CDG DC D SDE C H F ++CIP +W+CD ++DC+
Sbjct: 2923 WICDGDNDC-GDMSDEDERHECGNQNCSHTDFFCVNNRPPERRCIPQSWVCDGDVDCADG 2981
Query: 273 ---------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+D D +DE + C Q C
Sbjct: 2982 YDENQNCTRRSCSENEFTCSYGLCIPAVFRCDRYNDCGDYSDERGCSYPTCQENQFTCQ- 3040
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-------PNELRCGSSNQ 352
+ +CI +++CDE+ DC D +DE +H LCH P+E +C + +
Sbjct: 3041 NGRCISKSFVCDEDNDCG-----DGSDE-----LTH---LCHTLQPTCPPHEFKC-DNGR 3086
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKCSPTPRGAMCFCPAGQN-- 407
C+ + K C+ DC + DE N +C+N C H C+ T C C G
Sbjct: 3087 CIEMVKLCNHLDDCLDNSDEKGCGIN--ECQNPSISGCDHNCTDTLTSFYCSCRPGYKLM 3144
Query: 408 PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+K CVD DEC C Q C N SY+C C GY PDGK+C + EP +
Sbjct: 3145 SDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-L 3201
Query: 467 IFSSTVDIRRIHLNG 481
IFS+ +R + ++G
Sbjct: 3202 IFSNRYYLRNLTVDG 3216
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 152/373 (40%), Gaps = 78/373 (20%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCVPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD F DC D SDE + + C QC S C+ + CD DC +D +DE
Sbjct: 3778 CDHFNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSDLKCDGTADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ C +C + CIP W CD + DC D +DE+ + N
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPQYWKCDGDNDCG-----DGSDEELHQCL--NIP 3882
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------------------------- 373
PN RC +N+C+ + C+G DC +G DE
Sbjct: 3883 CNSPNRFRC-DNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNGHCI 3941
Query: 374 ---PFCNNKADCENLK-----------------CSHKCSPTPRGA-MCFCPAGQNP---N 409
C++ DC +L C C+ G +C C AG +
Sbjct: 3942 PHDSVCDDADDCGDLSDELGCNIGKERTCAENICEQNCTQLNEGGFICSCTAGFEASVFD 4001
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASII 467
+T C+D +EC G C Q C NT SY C C +G+T D GK C A + ++
Sbjct: 4002 RTSCLDINECEQFGICSQHCRNTKGSYECVCADGFTSMSDRLGKRCAA----EGSSPLLL 4057
Query: 468 FSSTVDIRRIHLN 480
V IR+ +L+
Sbjct: 4058 LPDNVRIRKYNLS 4070
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 105/204 (51%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+P F+CG G+CIP W CD DC+ DG
Sbjct: 1037 RCVPQYYRCDGIDDCHDNSDEQLCGTLNNTCSPSAFTCGHGECIPADWHCDKHNDCV-DG 1095
Query: 235 SDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE P C + Q C +++CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEQNCPTQAPASCLDTQYTCD-NQQCISKNWVCDTDNDCG-----DGSDEKNCNSTQTC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +CGS
Sbjct: 1150 QASQFNCP-NHRCIDLSFVCDGDRDC-----VDGSDE-------VGCVLNCTASQFKCGS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++K CDG DCS+ DE
Sbjct: 1197 GDKCISITKHCDGVFDCSDNSDEA 1220
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 172/445 (38%), Gaps = 118/445 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DAHLDSLFVSDLNGEHRRMLARHCVDVNNTFCF---DNPRGIVLHPQYGYIYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRIGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----HPNELR- 171
TVE + DGS L P ++
Sbjct: 3397 RHRHTVCDGTLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSKRQTLVNTTHRPFDIHV 3456
Query: 172 ------------CGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
CG++N S C KP E P +C C+
Sbjct: 3457 YHLYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCLPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDEP C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDEPTLCPQRFCRLGQFQCS-DGNCTSPQSLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H+C + QCA +K CIP +W CD DC D
Sbjct: 3573 NSHQNCP-----DGSDEDHLLCENHRCDTNEWQCA-NKLCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNNKAD 381
N+DED S C P + RC ++ +C+ + CD DC + DE P C + A
Sbjct: 3622 NSDEDSSHCASRT---CQPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE-PIEECMSSAH 3676
Query: 382 -CENL-----KCSHKCSPTPRGAMC 400
C+N K +++C P+ AMC
Sbjct: 3677 LCDNFTEFSCKTNYRC--IPKWAMC 3699
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDEPTLCPQRFCRLGQFQCSDGNCTSPQS 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE + H+C + QCA +K CIP +W CD DC DN+
Sbjct: 3571 LCNSHQNC-PDGSDEDHLLCENHRCDTNEWQCA-NKLCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCQPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAMCNGVDDCRDNSDE 3711
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 98/218 (44%), Gaps = 12/218 (5%)
Query: 177 QCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
+C+ C+G +C +N DE + C G C CIP + CDG DC +
Sbjct: 2792 RCIPREFVCNGVDNCHDNNTSDEKNCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDCGDH 2851
Query: 234 GSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
+ P C Q C + + QC S +CIP +W CDEE DCS D D + C +
Sbjct: 2852 SDENPIYCTTQTCSSSEFQCT-SGRCIPQHWYCDEEADCS--DASDEPASCGRQVRTCLS 2908
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ +C +CIP W+CD + DC D E ++ SH C N +
Sbjct: 2909 DEFKCD-DGRCIPSEWICDGDNDCGDMSDEDERHECGNQNCSHTDFFCVNNR---PPERR 2964
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCSH 389
C+ S CDG DC++G DE C ++ EN CS+
Sbjct: 2965 CIPQSWVCDGDVDCADGYDENQNCTRRSCSENEFTCSY 3002
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 116/273 (42%), Gaps = 69/273 (25%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RCG+S+ +C++ CD + DC +G DE A C+ F+C G+C+P
Sbjct: 2696 NGQRCGASSFTCSNGRCISEEWKCDTEDDCGDGSDEMESVCALHTCSLTAFTCTNGRCVP 2755
Query: 220 ESWKCDGFVDCL----EDG-------------------------------------SDEP 238
S++CD + DC E+G SDE
Sbjct: 2756 YSYRCDYYNDCGDSSDEEGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNTSDEK 2815
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQ 296
N C +G +C S CIP +LCD + DC D++DE+ + C + + Q
Sbjct: 2816 NCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDCG-----DHSDENPIYCTTQTCSSSEFQ 2870
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C S +CIP +W CDEE DCS D +DE C +E +C +C+
Sbjct: 2871 CT-SGRCIPQHWYCDEEADCS-----DASDE--PASCGRQVRTCLSDEFKC-DDGRCIPS 2921
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
CDG DC + DE + + +C N CSH
Sbjct: 2922 EWICDGDNDCGDMSDE----DERHECGNQNCSH 2950
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 105/257 (40%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDTNEWQC-ANKLCIPESWQCDTFNDCEDNSDEDSSHCASRTCQPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAMCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCVPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHFNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 DLKCDGTADCLDASDEA 3830
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 142/366 (38%), Gaps = 66/366 (18%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIF 102
DWD Y K L N R L + V L DLL D
Sbjct: 2525 DWDMYAK-----IERATLGGNFR---LPIVNSSLVMPSGLTLDYEEDLLYWVD------- 2569
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHN 161
P +R+E++ + G +R +V ++ + + Y Q I YW D + + + DGS
Sbjct: 2570 PSLQRIERSTLTGMDREVIVNAHVH--AFGLTLYGQHI-YWTDLYTQRIYRANKYDGSGQ 2626
Query: 162 A-----VLCHPNELRCGSSNQ-------CVAL----SKFCDGKPDCSNGE--DEGPFCNA 203
+L P + NQ C S C PD + + EG + A
Sbjct: 2627 IAMTTNLLFQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPDGAECQCPHEGNWYLA 2686
Query: 204 ------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQ 249
C F+C G+CI E WKCD DC DGSDE + +H C
Sbjct: 2687 NNKKHCIVDNGQRCGASSFTCSNGRCISEEWKCDTEDDC-GDGSDEMESVCALHTCSLTA 2745
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
C + +C+P+++ CD DC D++DE+ F C +++CIP ++
Sbjct: 2746 FTCT-NGRCVPYSYRCDYYNDCG-----DSSDEEGCLFRDCNATTEFMCNNRRCIPREFV 2799
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
C+ +C ++ D + D+ C +C +SN C+ CDG DC +
Sbjct: 2800 CNGVDNCHDNNTSDEKNCP-DR-------TCQSGYTKCQNSNICIPRIYLCDGDNDCGDH 2851
Query: 370 EDEGPF 375
DE P
Sbjct: 2852 SDENPI 2857
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P+ ++CDG DC D SDE T + C C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPQYYRCDGIDDC-HDNSDEQLCGTLNNTCSPSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE C + Q C +++CI NW+CD + DC
Sbjct: 1083 DWHCDKHNDC-----VDGSDEQNCPTQAPASCLDTQYTCD-NQQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C ++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTQTCQASQFNC-PNHRCIDLSFVCDGDRDCVDGSDE 1180
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAVAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC----HPN 168
+GE+R+ LV N+ WP+ L IDY N D +YW D + +E++R DG+ V+ HP
Sbjct: 4216 NGESRNVLVFGNLGWPTGLSIDYLNNDRIYWSDFKEDVIETIRFDGTDRRVITKEAMHPY 4275
Query: 169 EL 170
L
Sbjct: 4276 SL 4277
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVRTKLGWPAGITLDLISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G RS +V I WP L IDY +LY+ DS+L+ ++ +G H
Sbjct: 1578 RIERASMDGSMRSVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIA 1637
Query: 161 -NAVLCHPNEL 170
+ ++ HP L
Sbjct: 1638 SDLIIRHPYAL 1648
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P+V ++ WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPIVNTSLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E +DG L ++ L+ F G+ G G+
Sbjct: 893 KIEHSALDGLDRRRLGRIEQM-----THPFGLTIF--GEHLFFTDWRLGAIIRVRKADGR 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDINIQTGSNACSQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P + CD
Sbjct: 1002 YGMKLASNHLTCEGDPSNEPPTEQCGLFSFPCKNG--------RCVPQYYRCD-----GI 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C P+ CG +C+ CD DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSPSAFTCGHG-ECIPADWHCDKHNDCVDGSDE 1098
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/127 (19%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL + D+P +
Sbjct: 2145 NGVRGIAVDWVAGNIYFTNAFVSETLIEVLRINTTYRRVLLKATVDMPRHIVVDPKNRYL 2204
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D + +YW D L+ + + +
Sbjct: 2205 FWADYGQRPKIERSSLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIHIS 2264
Query: 158 GSHNAVL 164
G ++ V+
Sbjct: 2265 GGNSEVI 2271
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + P Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQTSLRPYGVTVYHPLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D +SC AV +IFSS + +R I
Sbjct: 683 DGLGFRCKCTFGFQLDIDARSCIAVQ------NFLIFSSQLAVRGI 722
>gi|380017337|ref|XP_003692614.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Apis florea]
Length = 4608
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 159/380 (41%), Gaps = 96/380 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN+ +C S +CV +S CD + DC + DE N CT QF+C +CIP +WKC
Sbjct: 1074 CAPNQFQC-KSGRCVPMSFLCDSENDCGDYSDEASCPNVTCTANQFACANNRCIPNTWKC 1132
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD---------EEMDCSTD 274
D DC D SDE + C+ + C Q C S CIP +W+CD +EMDC
Sbjct: 1133 DSENDC-GDSSDEGDFCVAKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDEMDCPPV 1191
Query: 275 DIVDN----TDEDW--------DKFHQCFNG------------------QVQCALSKKCI 304
+ D+ D C +G Q QC S CI
Sbjct: 1192 TCLSTQFTCADQKMCVLDSYKCDGISDCNDGSDEVGCPSLAPDQCNTDKQFQCVSSAICI 1251
Query: 305 PHNWLCDEEMDC-----------------------------------STDDIVDNTDEDW 329
P +W CD DC DD D +DED
Sbjct: 1252 PRSWYCDGTPDCPDRSDEPASCGQVGCQSGFFKCRNEKCVFKAYICDGKDDCGDGSDEDT 1311
Query: 330 DKYFSHNAVLCHPNELRCGS--------SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ + C E +C S +N CV ++ CD K DC NG DEGP CN + +
Sbjct: 1312 ELH------ACTAPEFKCDSQQWKCPNVTNICVNITSVCDNKFDCPNGADEGPACNFQ-E 1364
Query: 382 CENLK--CSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYV 437
CE CS+ C TP G C CP+G+ NK C D +EC G C Q C N Y
Sbjct: 1365 CEYRGGYCSNDCIETPLGKQCTCPSGEELNKDGYTCEDLNECEPPGRCSQICVNIKRGYY 1424
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C+C EGYTL D +C A N
Sbjct: 1425 CNCVEGYTLEKDKHTCKAFN 1444
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 160/336 (47%), Gaps = 45/336 (13%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG----SSNQCVALSKF 184
P++LV +Y +D C+S + +S C ++ CG + C+ +
Sbjct: 73 PATLVCNYQKD----CESAEDEFQSC------TPPDCEAGQITCGQYIFNKTYCIPPHQR 122
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---CIPESWKCDGFVDCLEDGSDEP--- 238
CD DC +G DE +C P F CG CIP+ KCDG++DC +G DE
Sbjct: 123 CDMTVDCVDGTDEAGCNYRKCQPDDFRCGNSTPELCIPKEKKCDGYLDC-RNGRDEEKCE 181
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
N C Q +C +++CI + C+ + DC DN+DE+ F QC Q +CA
Sbjct: 182 NNLKPACRLDQFRCNSTQRCIEQSARCNYKDDCG-----DNSDEENCNFQQCTMDQFRCA 236
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-----C 353
S CIP +++CD DC D +DE S C N+ C C
Sbjct: 237 NSL-CIPRSYVCDGYKDCH-----DGSDEK-----SCTTTSCPQNKFVCPRGTADGKPLC 285
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT 411
+ S+ CDGK DC + DE C++ C +L C +KC +P G +C+CPAG + T
Sbjct: 286 IDRSQICDGKTDCEDKADEEATCSS-VICTSLACGYKCRASPTGGVCYCPAGWILANDST 344
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C+D DEC G C+Q C NT SY CSC G+ L+
Sbjct: 345 TCIDRDECSEWGFCEQLCKNTEGSYTCSCAPGFILQ 380
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 144/359 (40%), Gaps = 80/359 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2827 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQSSFRCPNHRCIPATW 2886
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +D
Sbjct: 2887 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDY 2940
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + + C +K +CIP WLCD + DC VD DE+
Sbjct: 2941 SDED--ERHQCNDRKCDEETEFTCTANKVWHRAQCIPKKWLCDGDPDC-----VDGADEN 2993
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C N+ C + +C+ + CD DC +G DEG FCN +
Sbjct: 2994 VTLHHCPTPTPCAENQFTC-DNGRCLNQNWLCDHDNDCGDGSDEGKFCNTRYKPCTNQEF 3052
Query: 382 -CENLKCSHK------------------CSPTPRGAMCFCPAGQNPNKTQCVD------- 415
C N KC K C P + C P C+D
Sbjct: 3053 TCHNFKCIRKQFHCDGQDDCGDHSDEDGCPPKMKNMTCSNPKEFMCANGNCIDQQLVCNK 3112
Query: 416 ---------------ADECLI--DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC + C C +T SY C C GY L DGK+C ++
Sbjct: 3113 EPDCADESDEPAHCNVDECAMVEMNQCAHKCIDTPTSYYCECNPGYRLLADGKACEDID 3171
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 95/200 (47%), Gaps = 18/200 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C++ + CDG+ DC + DE C P QF C G+C+P S+ CD DC D
Sbjct: 1043 ANQRCISHAWVCDGENDCLDNSDERNCTKPTCAPNQFQCKSGRCVPMSFLCDSENDC-GD 1101
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN 292
SDE + C Q CA + +CIP+ W CD E DC D++DE D+ C
Sbjct: 1102 YSDEASCPNVTCTANQFACA-NNRCIPNTWKCDSENDCG-----DSSDEGDFCVAKTCSY 1155
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C S CIP +W+CD + DC D DE V C + C
Sbjct: 1156 FQFTCPRSGHCIPRSWVCDGDNDC-----FDQQDE-----MDCPPVTCLSTQFTCADQKM 1205
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV S CDG DC++G DE
Sbjct: 1206 CVLDSYKCDGISDCNDGSDE 1225
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPE 220
A +C P+ +C + N C CDG DC + DE CN EC +F C G+CI E
Sbjct: 3574 ARVCRPSVFQCANGN-CRPSVAVCDGADDCGDKSDEA-HCNLECGELEFKCKSNGRCIHE 3631
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
SWKCDG DC +DGSDE P C ++ N + C + +CI W+CD + DC
Sbjct: 3632 SWKCDGDADC-KDGSDEDPAICHNRPCDPNTEFTCK-NNRCIQKVWMCDSDNDCG----- 3684
Query: 278 DNTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D++DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3685 DDSDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-----DGSDE-----L 3734
Query: 334 SHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNNK 379
+ N C P + +C ++N+CV CD DC +G DE C N+
Sbjct: 3735 AENCPKCDPEMDFKC-TNNRCVPKQWLCDFADDCGDGSDEAETMCKNR 3781
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 143/355 (40%), Gaps = 64/355 (18%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEG-PFCN---AECTPGQFSCGMGKCIPESWKCDGFVD 229
++N+CV CD DC +G DE C EC+ +F C GKCI W+CD D
Sbjct: 3750 TNNRCVPKQWLCDFADDCGDGSDEAETMCKNRYRECSESEFRCDNGKCIASRWRCDSEDD 3809
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------ 271
C D SDE C N QCA S CI CD DC
Sbjct: 3810 C-GDNSDENGCQEFVCKNDTFQCA-SGHCIASYLRCDGTRDCRDMSDEIGCPPRYPGGRY 3867
Query: 272 ---------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
+DD D +DE+ + C N + +C+ H +
Sbjct: 3868 CPQSRFQCDNNLCVYLSDICDGSDDCGDGSDEN---TNMCANFKCDTTRRFQCVNHKCIA 3924
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
++ D+ D +DE+ + C ++ +C+ +K CD DC +
Sbjct: 3925 KYQLCDGIDNCGDGSDENNMTMCASRIRPCDAITEYTCANKKCIDRTKLCDFADDCGDSS 3984
Query: 371 DEGPFCNNKA--DCENLKCSHKC-SPTPRGAMCFCPAG----QNPNKTQCVDADECLI-D 422
DE +NK D CSH C + T G +C C G QN N+ C D DEC+
Sbjct: 3985 DELGCHHNKPCLDSNKGGCSHYCHNITEGGYICACYPGYIISQN-NRKHCEDIDECVTGQ 4043
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKS--CTAVNVPQDEPASIIFSSTVDIR 475
C Q CTN + +Y CSC +G+ L D +S C AV D I+F++ IR
Sbjct: 4044 HQCSQLCTNLNGTYSCSCRQGFELS-DNRSGVCRAV----DTNMMILFANGPGIR 4093
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV+ I +P ++ + ++ +YW D L V N V
Sbjct: 2576 VREKIERSELDGSNRQILVSATI-YPFAITV--FREHIYWTDLQLRGVYRAEKHTGANKV 2632
Query: 164 LC------HPNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
P +L S+ N C + CD G +C S +E
Sbjct: 2633 ELVKRLEDSPRDLHIYSAARQQCKINPCNISNGGCDQSCHPGINGSAECKCDDNSRLVNE 2692
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C +F+C G+CI W CDG DC + ++ N C H C + +C
Sbjct: 2693 DRMCVPKNVTCDSSKFACRNGRCISRMWACDGDDDCGDGSDEDTNYCSYHSCSPNEFRCN 2752
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2753 -NGRCIFKTWKCDHENDCR-----DGSDEEGCIYPPCAAGEFTCA-NYRCIPQSQVCNGI 2805
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C PN L+C +N CV CDG DC + DE
Sbjct: 2806 NDCKDNVTSDETHERCPR-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2860
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2861 PLHCAQRTCPQSSFRCPNHRCIPA 2884
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 95/328 (28%), Positives = 131/328 (39%), Gaps = 62/328 (18%)
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
IF D L+ A + G NR +++ P I D ++W D +L +
Sbjct: 3389 RIFWADAHLDYIAFADLEGHNRRKVLS-GTAVPHVFAITIFDDFIFWTDWNLKAISRAEK 3447
Query: 157 DGSHNAVLC-------------HP----------NELRCGSSNQCV----ALSKFCDG-- 187
+N + HP NE G S+ C+ A S +G
Sbjct: 3448 FSGYNLRVLRNTTHRPYDIHAYHPLRQLPYNNPCNENNGGCSHLCLISPPASSYLLEGYG 3507
Query: 188 -------KPDCSNG---EDEGPFCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGS 235
K C N + +G C A CT GQ CG KCIP WKCDG DC +DGS
Sbjct: 3508 QPGVTSYKCKCPNQFVLDKDGKTCTANCTAGQHKCGPPDEKCIPWYWKCDGEKDC-KDGS 3566
Query: 236 DEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
DEP +C C QCA + C P +CD DC D +DE +C +
Sbjct: 3567 DEPISCPARVCRPSVFQCA-NGNCRPSVAVCDGADDCG-----DKSDEAHCNL-ECGELE 3619
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + +CI +W CD + DC D +DE D HN C PN +N+C+
Sbjct: 3620 FKCKSNGRCIHESWKCDGDADCK-----DGSDE--DPAICHNRP-CDPNTEFTCKNNRCI 3671
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADC 382
CD DC + DE + + +C
Sbjct: 3672 QKVWMCDSDNDCGDDSDEPAYMCRQRNC 3699
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 78/163 (47%), Gaps = 17/163 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CI +W CDG DCL D SDE N C Q QC S +C+P ++LCD E
Sbjct: 1040 FTCANQRCISHAWVCDGENDCL-DNSDERNCTKPTCAPNQFQCK-SGRCVPMSFLCDSEN 1097
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC D +DE C Q CA + +CIP+ W CD E DC D++DE
Sbjct: 1098 DCG-----DYSDEASCPNVTCTANQFACA-NNRCIPNTWKCDSENDCG-----DSSDEG- 1145
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
A C + C S C+ S CDG DC + +DE
Sbjct: 1146 ---DFCVAKTCSYFQFTCPRSGHCIPRSWVCDGDNDCFDQQDE 1185
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 117/287 (40%), Gaps = 77/287 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP+S C
Sbjct: 2744 CSPNEFRC-NNGRCIFKTWKCDHENDCRDGSDEEGCIYPPCAAGEFTCANYRCIPQSQVC 2802
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2803 NGINDCKDNVTSDETHERCPRNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2857
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2858 DENPLHCAQRTCPQSSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2917
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +D +DED +++ ++ E C ++
Sbjct: 2918 TCD-NGNCIPRIYICDGDNDC-----LDYSDED-ERHQCNDRKCDEETEFTCTANKVWHR 2970
Query: 352 -QCVALSKFCDGKPDCSNGEDEG----------PFCNNKADCENLKC 387
QC+ CDG PDC +G DE P N+ C+N +C
Sbjct: 2971 AQCIPKKWLCDGDPDCVDGADENVTLHHCPTPTPCAENQFTCDNGRC 3017
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYN-QDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV+ I P +L IDY+ Q +LYW DS LNT+ES+ DGS+ ++
Sbjct: 4234 KIEIAWMDGDRRKQLVSDRIGQPIALTIDYSMQHVLYWADSKLNTIESIEQDGSNRKIIL 4293
Query: 166 HPNELR 171
+ L+
Sbjct: 4294 KGDSLK 4299
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF-----NGQVQCAL----SKKCI 304
L CIP +C+ + DC + + D+F C GQ+ C CI
Sbjct: 67 LDGTCIPATLVCNYQKDCESAE---------DEFQSCTPPDCEAGQITCGQYIFNKTYCI 117
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ--CVALSKFCDG 362
P + CD +DC VD TDE Y C P++ RCG+S C+ K CDG
Sbjct: 118 PPHQRCDMTVDC-----VDGTDEAGCNYRK-----CQPDDFRCGNSTPELCIPKEKKCDG 167
Query: 363 KPDCSNGEDEGPFCNN-KADC--ENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDAD 417
DC NG DE NN K C + +C+ + A C G N ++ C +
Sbjct: 168 YLDCRNGRDEEKCENNLKPACRLDQFRCNSTQRCIEQSARCNYKDDCGDNSDEENC-NFQ 226
Query: 418 ECLIDGSCDQTCTNT---HLSYVCSCTEGYTLRPDG---KSCTAVNVPQDE 462
+C +D C N+ SYVC +GY DG KSCT + PQ++
Sbjct: 227 QCTMD---QFRCANSLCIPRSYVC---DGYKDCHDGSDEKSCTTTSCPQNK 271
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS ++ I WP+ L +D +Y+ DS L+ +++ DGS
Sbjct: 1587 RIERIGMDGTNRSTIINTKIYWPNGLALDIANKRIYFADSKLDFIDTCLYDGSKRIQVLA 1646
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1647 SSHYLLHPHSL 1657
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 53 NGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
+ H E N N+ + ++ + SW L A + K G
Sbjct: 3308 HAKHLDVAELNGTNRKTLLTGIADPRAIVVHPGTGYLYFTSWHLQA--------YIGKMG 3359
Query: 113 MHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
M G N + ++T +I WP++L IDY D ++W D+HL+ + ++G HN
Sbjct: 3360 MDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEG-HN 3409
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Query: 27 EEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLR 83
E + S ++ V+ DW + Y+ GT + N + + ++ +
Sbjct: 773 EVVLASQNEGVEGLAVDWVAKNLYYIDSRKGTLNVLSTRNVTYRRTLLKNLKRPRAIVIH 832
Query: 84 CAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
Q + WD PA + +A G N ++ WP+ L ID+ +D LYW
Sbjct: 833 PNQGYIFFSEWDRPA--------NISRAYTDGSNLIVFKNXSLGWPNGLAIDFAKDRLYW 884
Query: 144 CDSHLNTVESVRVDGS 159
CD+ L+ V+ ++G+
Sbjct: 885 CDALLDHVQHSNLNGT 900
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL KA + G N +VT I P + ID +YW DS +T++ V G + ++
Sbjct: 2222 RLGKAYLDGSNWMSIVTSGISTPRDITIDPITHDVYWVDSKQDTIQKVSYTGGNRQII 2279
>gi|301614657|ref|XP_002936802.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Xenopus (Silurana) tropicalis]
Length = 4553
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 111/301 (36%), Positives = 147/301 (48%), Gaps = 27/301 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + +C ++C+ S CDG DC +G DE C C+ +F C G +CI ++
Sbjct: 1175 CEPGQFQC-PDHRCIDPSYVCDGDKDCVDGSDEMG-CTYNCSYSEFKCASGDQCISTGYQ 1232
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP NW CD DC +D +
Sbjct: 1233 CDGVFDC-NDHSDELNCPTRPAGMCHQNEFQCQSDGACIPSNWECDGHPDC-----IDGS 1286
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C +C + CI +W+CD + DC D +DE K
Sbjct: 1287 DEHNTCPVRSCPPSMFRCD-NGNCIYRSWICDGDNDCR-----DMSDE---KDCPTPPFR 1337
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCSHKCSPTPRGA 398
C + +C + C+ +SK CD PDC NG DE P CN ++ +N C+H+C P GA
Sbjct: 1338 CPSWQWQCPGNTICINVSKVCDNTPDCPNGADESPLCNQESCTDNNAGCTHQCIQGPFGA 1397
Query: 399 MCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C CP G N +KT C D +ECL G C QTC N SY C C +GY L P+G++C A
Sbjct: 1398 QCTCPEGYSLSNDSKT-CEDINECLTPGFCSQTCYNERGSYRCYCEDGYILEPNGRTCKA 1456
Query: 456 V 456
Sbjct: 1457 A 1457
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 162/326 (49%), Gaps = 32/326 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C SS QC+ + CD DC++G DE CT + SCG G C S +C
Sbjct: 137 CSAQQFTC-SSGQCIPRAYRCDRMKDCTDGADERNCLYPVCT--ELSCGSGACYNRSQRC 193
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C +C + Q QC S +CIP ++LCD + DC D +DE
Sbjct: 194 DGIVDC-RDSSDESN-CTQRCLSSQFQCP-SGECIPRDFLCDHDDDCG-----DESDEKN 245
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C C+ + +CI WLCD + DC ++W H C P E
Sbjct: 246 CTYPTCRGDYFTCS-NGRCIHQTWLCDGDDDCDD------NGDEWGCEGGHRE--CGPGE 296
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMC 400
C SS QC+ + K CDG C GEDE + +C +L C H+C +P G +C
Sbjct: 297 WACPSSGQCIPVDKVCDGIVHCRFGEDESNITAGRNCSTNNCASLSCQHRCHSSPAGGLC 356
Query: 401 FCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
+CPAG N ++T C+D D+C + G CDQ C + SY CSC EGY L K C A
Sbjct: 357 YCPAGYVISSNDSRT-CIDFDDCKMWGICDQFCEDRIGSYRCSCAEGYILE-HHKHCRAN 414
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
+ P SIIFS+ D+ ++G
Sbjct: 415 ST--RGPPSIIFSNGRDLLIGDIHGG 438
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 159/363 (43%), Gaps = 86/363 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C P +C S+N C+ + CDG DC + DE P CT +F C G+CIP W
Sbjct: 2848 CQPGYTKCRSTNICIPRTYLCDGDNDCGDMSDESPTHCVTLTCTESEFRCSSGRCIPGHW 2907
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD VDC DGSDEP TC + C + Q +C +CIP +W+CD + DC D
Sbjct: 2908 YCDQGVDC-SDGSDEPPTCVAHVRTCSSDQFRCD-DARCIPASWICDGDNDCG-----DM 2960
Query: 280 TDEDWDKFHQCFNGQVQCALS-----------KKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DE D+ H C N CA + ++CIP +W+CD + DCS +
Sbjct: 2961 SDE--DQRHNCAN--RSCAPTEFTCINNRPPERRCIPQSWVCDGDADCS---------DA 3007
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------------- 372
+D++ + C +E C ++ CV + CD + DC +G DE
Sbjct: 3008 YDEHQNCTRRSCSSSEFAC-ANGLCVRSNFRCDRRNDCGDGSDERGCIYPTCQQQQFTCQ 3066
Query: 373 -------GPFCNNKADC--ENLKCSHKCSPT-----PRGAMC---FCPA----------- 404
C+ DC E+ + H C+ + P C C A
Sbjct: 3067 NGRCISKAFVCDGDNDCGDESDELEHTCTTSEATCNPHYFKCDNWICIAQGSVCNGNDDC 3126
Query: 405 GQNPNKTQCVDADEC---LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G N ++ C +EC I G CD CT+T S+ C+C GY L D ++C ++ +
Sbjct: 3127 GDNSDEKAC-GINECNDPSISG-CDHNCTDTQTSFFCTCRPGYRLMSDKRTCDDIDECSE 3184
Query: 462 EPA 464
P+
Sbjct: 3185 TPS 3187
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 156/368 (42%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
+ C +E RC SS +C+ +CD DCS+G DE P C A C+ QF C +CI
Sbjct: 2887 TLTCTESEFRC-SSGRCIPGHWYCDQGVDCSDGSDEPPTCVAHVRTCSSDQFRCDDARCI 2945
Query: 219 PESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCS 272
P SW CDG DC + D N C + C ++CIP +W+CD + DCS
Sbjct: 2946 PASWICDGDNDCGDMSDEDQRHNCANRSCAPTEFTCINNRPPERRCIPQSWVCDGDADCS 3005
Query: 273 TDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST------------- 318
D DE + C + + CA + C+ N+ CD DC
Sbjct: 3006 -----DAYDEHQNCTRRSCSSSEFACA-NGLCVRSNFRCDRRNDCGDGSDERGCIYPTCQ 3059
Query: 319 ---------------------DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+D D +DE + + + C+P+ +C + C+A
Sbjct: 3060 QQQFTCQNGRCISKAFVCDGDNDCGDESDE-LEHTCTTSEATCNPHYFKCDNW-ICIAQG 3117
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
C+G DC + DE N+ + ++ C H C+ T C C G +K C
Sbjct: 3118 SVCNGNDDCGDNSDEKACGINECNDPSISGCDHNCTDTQTSFFCTCRPGYRLMSDKRTCD 3177
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY P+G++C + +IFS+
Sbjct: 3178 DIDECSETPSVCSQICENTAGSYICKCAPGYIREPNGRNCRQ---NSNINPYLIFSNRYY 3234
Query: 474 IRRIHLNG 481
+R + L+G
Sbjct: 3235 LRNLSLDG 3242
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C S +C+ + CDG+ DC +G DE C C GQF C G C +
Sbjct: 3538 CSSTQFLCADSERCIPIWWKCDGQRDCRDGSDEPATCPQRYCRVGQFQCNDGNCTSSYFM 3597
Query: 224 CDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ + DC DGSDE HQC Q QCA +K+CIP +W CD+E DC DN+D
Sbjct: 3598 CNSYPDC-PDGSDEDQILCANHQCDTHQWQCA-NKRCIPESWQCDQEDDCG-----DNSD 3650
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C GQ +C + +CIP +W CD + DC D++DE + +
Sbjct: 3651 EDSAHCSTRTCNPGQFRCN-NGRCIPQSWKCDVDDDCG-----DHSDEPFQECMGPAYRC 3704
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C ++ +CV + C+G DC + DE
Sbjct: 3705 DNHTDFDCRTNYRCVPMWSVCNGYDDCRDNSDE 3737
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 150/370 (40%), Gaps = 81/370 (21%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ RC +++C+ L CDG DC++G DE ECT +F C +CIP W CD
Sbjct: 3750 DFRC-DNHRCIPLRWKCDGDNDCNDGSDERNCSPRECTESEFRCDNLRCIPGRWICDHDN 3808
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----D 283
DC ED SDE + I C G QC S CI + CD DC +D +DE
Sbjct: 3809 DC-EDNSDERDCEIRTCHPGYFQCN-SGHCIAERFRCDGTADC-----LDVSDEAACPTR 3861
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C +C + CI W CD + DC D +DE+ + C P
Sbjct: 3862 YPNGTYCPASMFECK-NHVCIQPYWRCDGDNDCG-----DGSDEELQHCLD---IPCEPP 3912
Query: 344 -ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------------------- 374
RCG+ N+CV + C+G DCS+G DE
Sbjct: 3913 FRFRCGN-NRCVYRHEICNGVDDCSDGSDETEEQCRPPTPRPCTDEEYKCGNHFCVPLHY 3971
Query: 375 FCNNKADC------------------ENLKCSHKCSPTPRGA-MCFCPAGQNP---NKTQ 412
C++ DC EN+ C H C+ G +C C G ++
Sbjct: 3972 VCDDYDDCGDHSDEAGCNRGTQRSCSENI-CEHNCTNLSEGGFICSCRPGYKASESDRNS 4030
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSS 470
C D +EC + C Q C N+ SY C C EGY D G C A + P ++
Sbjct: 4031 CEDINECELYRKCPQDCKNSKGSYECFCAEGYRSVGDQQGTQCAA----EGTPPLLLLPD 4086
Query: 471 TVDIRRIHLN 480
V IRR +L+
Sbjct: 4087 NVRIRRYNLS 4096
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 136/337 (40%), Gaps = 83/337 (24%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+ +AGM G+N++ +++ I+WP+ L IDY D+LYW D+HLN +E +DG H
Sbjct: 3372 IGRAGMDGKNKTVIISTKIEWPNGLTIDYTNDMLYWADAHLNYIEYSDLDGRHRHTVYDG 3431
Query: 164 -LCHPNELRCGSSN--------QCVALSKFCDGKPDCSNGED-------------EGPFC 201
L HP + N + V DG P
Sbjct: 3432 NLPHPFAITVFEDNIYWTDWNTRTVEKGNKYDGSGRTMLANTTHRPFDIHVYHPYRQPIT 3491
Query: 202 NAECTPGQFSCGMGKCIPESWK-----CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N C C I E + C ++ GS C+ C + Q CA S+
Sbjct: 3492 NNPCGRNNGGCSHLCLIKEGGQGYTCECPDHFLAVQFGS--VVRCLPACSSTQFLCADSE 3549
Query: 257 KCIPHNWLCDEEMDC-----------------------------------STDDIVDNTD 281
+CIP W CD + DC S D D +D
Sbjct: 3550 RCIPIWWKCDGQRDCRDGSDEPATCPQRYCRVGQFQCNDGNCTSSYFMCNSYPDCPDGSD 3609
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAV 338
ED HQC Q QCA +K+CIP +W CD+E DC DN+DED +H +
Sbjct: 3610 EDQILCANHQCDTHQWQCA-NKRCIPESWQCDQEDDCG-----DNSDED----SAHCSTR 3659
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C+P + RC ++ +C+ S CD DC + DE PF
Sbjct: 3660 TCNPGQFRC-NNGRCIPQSWKCDVDDDCGDHSDE-PF 3694
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 149/384 (38%), Gaps = 105/384 (27%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P ++CGS + +CV + CDG DC + DE N C+ F+CG G+CI
Sbjct: 1047 PPTMQCGSYSFPCANGKCVPVYDRCDGVDDCHDNSDEANCGTRNNTCSSRAFTCGNGQCI 1106
Query: 219 PESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
P +W+CD DC+ D SDE P C + C + +CIP WLCD + DC
Sbjct: 1107 PLNWRCDSHNDCV-DRSDEQNCPTQGPRSCSSTSFTCQ-NNRCIPRIWLCDTDNDCG--- 1161
Query: 276 IVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCD--------------------EEM 314
D +DE F C GQ QC +CI +++CD E
Sbjct: 1162 --DGSDELNCNFTSTCEPGQFQCP-DHRCIDPSYVCDGDKDCVDGSDEMGCTYNCSYSEF 1218
Query: 315 DCSTDDIVDNTDEDWDKYF------------SHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C++ D +T D F + A +CH NE +C S C+ + CDG
Sbjct: 1219 KCASGDQCISTGYQCDGVFDCNDHSDELNCPTRPAGMCHQNEFQCQSDGACIPSNWECDG 1278
Query: 363 KPDCSNGEDE------------------------GPFCNNKADCENLKCSHKCSPTPRGA 398
PDC +G DE C+ DC ++ C PTP
Sbjct: 1279 HPDCIDGSDEHNTCPVRSCPPSMFRCDNGNCIYRSWICDGDNDCRDMSDEKDC-PTPPFR 1337
Query: 399 MCFCPAGQN--PNKTQCVD--------------ADECLI---------DGSCDQTCTNTH 433
CP+ Q P T C++ ADE + + C C
Sbjct: 1338 ---CPSWQWQCPGNTICINVSKVCDNTPDCPNGADESPLCNQESCTDNNAGCTHQCIQGP 1394
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVN 457
C+C EGY+L D K+C +N
Sbjct: 1395 FGAQCTCPEGYSLSNDSKTCEDIN 1418
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 128/303 (42%), Gaps = 53/303 (17%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E+ + G NR +V+ + +P ++ + Y+Q I YW D + ++ + DGS ++
Sbjct: 2599 QKIERCSLTGTNREVVVSTAV-YPFAMTL-YDQHI-YWTDWNTRSIYRANKHDGSDQIIM 2655
Query: 165 CH-----PNELRCGSSNQCVALSKFCDG---------KPDCSNGEDEGPFCN-------- 202
P ++ S N+ S CD P + E + P
Sbjct: 2656 IQNLPQRPMDIHVLSKNKQQQCSSPCDQFNGGCSHICAPGPNGAECQCPASGRWYLANNN 2715
Query: 203 --------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
C G+F+C G+CIPE KCD DC DGSDE H C + C
Sbjct: 2716 KDCIVDNGTRCENGKFTCLNGRCIPERHKCDNDNDC-RDGSDELERVCAFHTCPSTSFTC 2774
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCD 311
+ +C+P+++ CD DC DN+DE F C N + C + +CI ++C+
Sbjct: 2775 G-NGRCVPYHYRCDHYNDCG-----DNSDELGCLFRTCDPNTEFTCN-NGRCISRAYVCN 2827
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+C DN D C P +C S+N C+ + CDG DC + D
Sbjct: 2828 GVNNC-----FDNGTSDERNCPDRT---CQPGYTKCRSTNICIPRTYLCDGDNDCGDMSD 2879
Query: 372 EGP 374
E P
Sbjct: 2880 ESP 2882
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPE 220
A +CH NE +C S C+ + CDG PDC +G DE C C P F C G CI
Sbjct: 1253 AGMCHQNEFQCQSDGACIPSNWECDGHPDCIDGSDEHNTCPVRSCPPSMFRCDNGNCIYR 1312
Query: 221 SWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
SW CDG DC D SDE + T +C + Q QC + CI + +CD DC
Sbjct: 1313 SWICDGDNDC-RDMSDEKDCPTPPFRCPSWQWQCPGNTICINVSKVCDNTPDC 1364
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 24/129 (18%)
Query: 50 RILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW------DLPA----- 98
R + LA+++ R+ I + + R+ A+++ W D PA
Sbjct: 4165 RYIGNPDGLAVDWVGRH-----IYWTDAGTNRIEVAKLDGRYRKWLIYTQIDQPAAIVVN 4219
Query: 99 PEI-------FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNT 150
PE+ + ++E A M G+ R LV++++ WP+ L IDY N++ +YW DS N
Sbjct: 4220 PELGFMYWTDWGRQPKIECAWMDGQQRQVLVSEDLGWPTGLTIDYINKNRIYWSDSKENI 4279
Query: 151 VESVRVDGS 159
+ES++ DG+
Sbjct: 4280 IESIKPDGT 4288
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G+ R+ +V+ I WP+ L IDY LY+ D++L+ ++ DG +
Sbjct: 1604 RIERASMDGKMRTVIVSNKIYWPNGLAIDYPNKRLYFADAYLDYIDYCDYDGNNRKQAMA 1663
Query: 160 HNAVLCHPNEL 170
+ VL HP+ +
Sbjct: 1664 SDLVLQHPHAI 1674
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R+ +V ++ WP+ L +DY ++ LYW D++L +E + G++ V+
Sbjct: 2555 NAKIERATLGGNFRTAIVNTSLVWPNGLTLDYEEERLYWADANLQKIERCSLTGTNREVV 2614
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR ++ + WP+ + +D LYW DS + +E+ DG +
Sbjct: 561 ESKLERAFMDGTNRHDIIKTKLGWPAGMTLDIITKRLYWVDSRYDYIETTTYDGLDRRTV 620
Query: 165 CH 166
H
Sbjct: 621 VH 622
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLPA----PEIFP 103
+ G LA ++ +N + +++S ++L R A I +L N + IF
Sbjct: 809 VEGVEDLAYDWISKNLYWTDPRYRSISVMKLADKSRRAIIQNLNNPRSIVVHPVIGYIFW 868
Query: 104 LD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
D ++ +A G + P+V ++ WP+ L +D++ LYW D+ + VE DG
Sbjct: 869 TDWYRPAKIMRAWCDGSHLQPIVNSSLGWPNGLAMDWSSLRLYWVDAFFDKVEHSTFDGL 928
Query: 160 HNAVL 164
L
Sbjct: 929 DRQTL 933
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 8/121 (6%)
Query: 54 GTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD---ER 107
G+ L L RNQ + Q N+ V I + +D IF D ++
Sbjct: 1458 GSANLLLLVASRNQIIADNITTQAHNIYPVIRDGRTI--VAIDFDSVTNRIFWSDIAQDK 1515
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ A ++G +R + + S+ +D+ LYW D L T+E ++DG+H VL
Sbjct: 1516 IWSAFVNGTDRKVIFDSGVTVTESIAVDWVGRNLYWTDYVLETIEVSQLDGTHRTVLISE 1575
Query: 168 N 168
N
Sbjct: 1576 N 1576
Score = 38.9 bits (89), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK + + ++ S P G + A Q + C + G C+Q C +H
Sbjct: 654 NKFTDNSTQVVYRSSSRPYGVTVYHSARQPYVRNPCGTNN-----GGCEQICVLSHRTDN 708
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C V ++FSS + +R I N S
Sbjct: 709 GGLGYRCRCKLGFDLHEDGRRCVVVR------KFLLFSSQLAVRGIPFNLS 753
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
HQC Q QCA +K+CIP +W CD+E DC DN+DED
Sbjct: 3618 HQCDTHQWQCA-NKRCIPESWQCDQEDDCG-----DNSDED 3652
>gi|332210037|ref|XP_003254115.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Nomascus leucogenys]
Length = 4621
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 124/335 (37%), Positives = 162/335 (48%), Gaps = 31/335 (9%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R D S N C +++ C S+ QC+ CD DC +G DE C Q +C
Sbjct: 100 RQDCSQNT--CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDN 154
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G C S KCD VDC D SDE N C C + + C S +CIP ++CD + DC
Sbjct: 155 GACYNTSQKCDWKVDC-RDSSDEVN-CTEICLHNEFSCG-SGECIPRAYVCDHDNDCQ-- 209
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE + C Q C S +CI NW+CD E DC DN DED +
Sbjct: 210 ---DGSDEHACNYPTCGGHQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSP 260
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSH 389
H+ C P E C S +C+++ K CDG DC EDE G +C+ C L C +
Sbjct: 261 HDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENSTTTGKYCSTTL-CSALNCQY 319
Query: 390 KCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
+C TP G CFCP G N CV+ D+C I G CDQ C + ++C C EGY L
Sbjct: 320 QCHETPYGGACFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYIL 379
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C A N + ASIIFS+ D+ ++G
Sbjct: 380 E-RGQYCKANNSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCISVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDIPGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 143/365 (39%), Gaps = 62/365 (16%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + DC D SDE + + C QC S C+P CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVPSELKCDGTADC-----LDASDEA 3830
Query: 284 ----------------------------W-------------DKFHQCFNGQVQCALSKK 302
W ++ H C N +
Sbjct: 3831 DCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLNVPCNSPNRFR 3890
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C + + E+ DD D TDE + C E +CG+ CV CD
Sbjct: 3891 CDNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCVPHDNVCDD 3949
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDAD 417
DC + DE G + C C C+ G +C C AG N +T C+D +
Sbjct: 3950 ADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDIN 4009
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIR 475
EC G+C Q C NT SY C C +G+T D GK C A + ++ V IR
Sbjct: 4010 ECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGNSPLLLLPDNVRIR 4065
Query: 476 RIHLN 480
+ +L+
Sbjct: 4066 KYNLS 4070
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CLPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFV 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2949
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 154/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYRCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++ CDG DCS+ DE
Sbjct: 1197 GDKCISVTNRCDGVFDCSDNSDEA 1220
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVPS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGTADCLDASDEA 3830
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYRCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSEHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFRCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS + C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQN--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEV 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGHQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D ++ H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSPHDVHKCSPRE 270
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 17/173 (9%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPH 261
C F+C G+CI E WKCD DC DGSDE + +H C CA + +C+ +
Sbjct: 2699 RCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCLPTAFTCA-NGRCVQY 2756
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++ CD DC D +DE F C +++CIP ++C+ +C ++
Sbjct: 2757 SYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNT 2811
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D + D+ C +C +SN C+ CDG DC + DE P
Sbjct: 2812 SDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENP 2856
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D LYW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRLYWSDFKEDVIETIKCDGTDRRVI 4267
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDTISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L +DY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTVDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P+V + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPIVNTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEYLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ + CD
Sbjct: 1002 YGMKLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYRCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL + D+P +
Sbjct: 2145 NGVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYL 2204
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D + +YW D L+ + +R++
Sbjct: 2205 FWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRIN 2264
Query: 158 GSHNAVL 164
G ++ V+
Sbjct: 2265 GENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + CTAV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERRCTAVQ------NFLIFSSQVAIRGI 722
>gi|195474641|ref|XP_002089599.1| GE19184 [Drosophila yakuba]
gi|194175700|gb|EDW89311.1| GE19184 [Drosophila yakuba]
Length = 4693
Score = 151 bits (381), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 126/231 (54%), Gaps = 23/231 (9%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CIP W CD + DC D +DE D + +C GQ +C S+ CIP+NWLCD E D
Sbjct: 39 CIPMRWKCDSKADCP-----DMSDEGSDCAEAPKCNEGQFRCGASRHCIPNNWLCDGEFD 93
Query: 316 CSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C D D + H A C E +C + + C+ LS+FCDG+ DC N E +
Sbjct: 94 CGKGDTSDELN------CPHGATPKCRAFEGQCRNGD-CLELSRFCDGRWDCDNDELQ-- 144
Query: 375 FCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCT 430
C+ + A C L CS C TP+GA C+CP Q P N T+CVD DEC G+CDQ C
Sbjct: 145 -CDKQDAACAALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQLCR 203
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
NT SY CSC GY + G C A+NVP EPA++IF S ++ I NG
Sbjct: 204 NTPGSYECSCVSGYA-KTKGGRCRAINVPPTEPATLIFLSRDGVQSIGTNG 253
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 165/379 (43%), Gaps = 71/379 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+H + C P + RC + N C+A S CDG+ DC++G DE C EC QF+C C
Sbjct: 2744 GNHTSASCDPGQFRCAAGN-CIAGSWHCDGENDCADGSDEMN-CRFECGHNQFACDK-TC 2800
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP SW+CDG DC EDGSDE C + C QC S +CIP W+CD E DC + +
Sbjct: 2801 IPASWQCDGKSDC-EDGSDEGPQCPSRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GL 2858
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDE 327
D E D+ QC S CI +++CD + DC DD +
Sbjct: 2859 GDEGSE--DEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVP 2916
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------- 374
+ + ++ H +C + C+ ++ CDGK DCS+G DE
Sbjct: 2917 AFQPHSCPGGMMMH----QCLDGD-CIFKNQTCDGKLDCSDGSDEASSLCAHTRGCNGTD 2971
Query: 375 --------------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAG 405
C+ + DC + C H+C G C C +G
Sbjct: 2972 DFRCKNGACIHADLLCDRRNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRSG 3031
Query: 406 QN--PNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
P T C D DEC C Q C NT+ SY C C +GY L D +C A + +
Sbjct: 3032 FKLLPKSTHLCTDIDECSEQQPCSQICVNTYGSYKCLCAKGYAL-VDHHTCKATS---NV 3087
Query: 463 PASIIFSSTVDIRRIHLNG 481
+IFS+ IR++ + G
Sbjct: 3088 SMELIFSNRYYIRQVDMTG 3106
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 135/335 (40%), Gaps = 67/335 (20%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ CG+S C+ CDG PDC +G DE G +A C PGQF C G CI SW CDG
Sbjct: 2713 VHCGNSTICIMPRWRCDGDPDCPDGTDELDCGNHTSASCDPGQFRCAAGNCIAGSWHCDG 2772
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD- 285
DC DGSDE N C +C + Q C K CIP +W CD + DC D +DE
Sbjct: 2773 ENDC-ADGSDEMN-CRFECGHNQFAC--DKTCIPASWQCDGKSDCE-----DGSDEGPQC 2823
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPN 343
C QC S +CIP W+CD E DC + + D ED A + C P
Sbjct: 2824 PSRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GLGDEGSEDEGPQCGGVAHIPDCPPP 2882
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-----------------ADC--EN 384
C +S C+ CDG DC G+DE C DC +N
Sbjct: 2883 AHLC-TSGLCIDSHYVCDGDEDCPGGDDEYEGCVPAFQPHSCPGGMMMHQCLDGDCIFKN 2941
Query: 385 LKCSHK--CSPTPRGAMCFCPAGQNPNKT--------QCVDAD----------------- 417
C K CS A C + N T C+ AD
Sbjct: 2942 QTCDGKLDCSDGSDEASSLCAHTRGCNGTDDFRCKNGACIHADLLCDRRNDCADFSDEEL 3001
Query: 418 ----ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
ECLI C+ C + + Y C C G+ L P
Sbjct: 3002 CNVNECLIPDICEHECEDKVVGYQCHCRSGFKLLP 3036
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 48/343 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIP 219
C+ NE C S +C+ L+ DG DC +D E F ++C +F C G+C
Sbjct: 999 CNSNEFTCHKSGRCIQLTWVNDGVVDCGPDDDSDETSETIFA-SKCP--EFDCNNGRCRQ 1055
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CDG +C + +DE C +C +G+ C C +CD DC VD
Sbjct: 1056 FADVCDGVDNC-GNNADEVE-CDQECEHGEKYCR-PIGCYGEMHMCDGIHDC-----VDF 1107
Query: 280 TDE--------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE W + +C + C +CIP+ CD C D T
Sbjct: 1108 SDEANCNQTKSDNHPMTGWKELSECGPLEFACMDPFECIPNFLRCDGIPHC-----FDKT 1162
Query: 326 DE------DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
DE + ++ + V+C HP+ L CG S CV + + CDGK DC + DEG C +
Sbjct: 1163 DEFNCTHINASRFDMNETVICEHPDRL-CGFSKLCVTVDQLCDGKNDCEDTTDEGFLCAD 1221
Query: 379 KADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
K +CSH+C TP G +C CP PN +C C +C Q C ++ Y
Sbjct: 1222 KLCDRGHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGY 1281
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C +G+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1282 DCRCLDGFDLAFDRFTCKS--TAPDEPY-VIFTNRQDIKGINL 1321
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N ++CG SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3479 CFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKRDQFQCGNNRCMPF 3538
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD++ DC +
Sbjct: 3539 VWVCDGDIDC-PDKSDEANCDNVSCGPNDFQCD-SGRCIPLAWRCDDDHDCPNGE----- 3591
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF+ + C + KCIP W CD E DC D +DE +
Sbjct: 3592 ----DEPESCFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3637
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ + CDG+ C + DE
Sbjct: 3638 CQMRNCSESEFRCGTG-KCIKHNYRCDGEIHCDDNSDE 3674
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C ++ +CG+ N+C+ CDG DC + DE N C P F C G+CIP +W
Sbjct: 3521 LVCKRDQFQCGN-NRCMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAW 3579
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP +C F+ + C + KCIP W CD E DC
Sbjct: 3580 RCDDDHDC-PNGEDEPESC----FSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3630
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT--DEDWDKY 332
D +DE + C + +C + KCI HN+ CD E+ C ++D+I N E+ K
Sbjct: 3631 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDNSDEINCNITCKENQFKC 3688
Query: 333 FSHNAVL----------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ N + CH + CG+ +C+ CDG DC +G
Sbjct: 3689 AAFNTCINKQYKCDGDDDCPDGSDEVNCTCHSDHFSCGNG-KCIMSRWKCDGWDDCLDGS 3747
Query: 371 DE 372
DE
Sbjct: 3748 DE 3749
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 104/239 (43%), Gaps = 38/239 (15%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPF---CNAEC------------TPGQFSCGMGKCIPE 220
++C+ CDG+ C +G DE P C +E TP F CG G+CIP
Sbjct: 2622 HRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEEIDVHQSNNHTRETPDMFRCGSGECIPR 2681
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ CD DC D SDE C V C S CI W CD + DC D
Sbjct: 2682 KFLCDSLKDC-RDFSDEKMCAPIPCEQNDMTFVHCGNSTICIMPRWRCDGDPDCP--DGT 2738
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D D C GQ +CA + CI +W CD E DC+ D +DE ++
Sbjct: 2739 DELDCGNHTSASCDPGQFRCA-AGNCIAGSWHCDGENDCA-----DGSDEMNCRF----- 2787
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCSP 393
C N+ C + C+ S CDGK DC +G DEGP C ++ +L K S +C P
Sbjct: 2788 -ECGHNQFACDKT--CIPASWQCDGKSDCEDGSDEGPQCPSRPCRPHLFQCKSSGRCIP 2843
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 152/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3229 IGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3288
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRC--- 172
YW D ++E + N + P +LR
Sbjct: 3289 SINPALNLHHIFAIAVWEGHIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHP 3348
Query: 173 ------GSSNQCVAL--SKFCDGKPDCSNGE----------DEGPFCNAECTPGQFSC-G 213
S N C+A S C P+ + D+G C A CT F C
Sbjct: 3349 YRQQQPMSGNPCLAANCSTLCVLSPEKPYYKCMCPTNFILADDGRTCRANCTAAHFECVN 3408
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP TC C GQ QCA +KKC + LCD C
Sbjct: 3409 TYKCIPFYWRCDTQDDC-GDGSDEPETCPPFHCEPGQYQCA-NKKCTHPSNLCDGIHQCG 3466
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF+ ++C +
Sbjct: 3467 -----DGSDELNCDKF-TCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTP 3520
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P W+CD ++DC D +DE + + V C PN+ +C
Sbjct: 3521 LVCKRDQFQCGNNRCMPFVWVCDGDIDCP-----DKSDE-----ANCDNVSCGPNDFQC- 3569
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD DC NGEDE C ++KA C+ KC++ KC P
Sbjct: 3570 DSGRCIPLAWRCDDDHDCPNGEDEPESCFSSKATCDPTYFKCNNSKCIP 3618
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 128/330 (38%), Gaps = 69/330 (20%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+ G NR L + ++ + D+L+W D L+
Sbjct: 2430 TLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2487
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD--------GK 188
V V V + C +NQC L+ C+ G+
Sbjct: 2488 AVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSINC-DANQCKILNGQCEDVCILNKSGQ 2546
Query: 189 PDCSNGED----EGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
C + +G C N C Q++C G+CIP CD C DGSDE +
Sbjct: 2547 ASCHCTQGVLAPDGRRCIAPVNTSCGLSQYNCRSGECIPLELTCDNVTHC-ADGSDEFRS 2605
Query: 241 -CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT-------DEDWDKFHQCF 291
CI QC C + +CIP CD E C D D T E+ D HQ
Sbjct: 2606 YCIFRQCPETHFMCQ-NHRCIPKEHKCDGEQQCG--DGSDETPLLCKCQSEEID-VHQSN 2661
Query: 292 N------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
N +C S +CIP +LCD DC D +DE + C N++
Sbjct: 2662 NHTRETPDMFRCG-SGECIPRKFLCDSLKDCR-----DFSDEKMCA-----PIPCEQNDM 2710
Query: 346 ---RCGSSNQCVALSKFCDGKPDCSNGEDE 372
CG+S C+ CDG PDC +G DE
Sbjct: 2711 TFVHCGNSTICIMPRWRCDGDPDCPDGTDE 2740
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C FSCG GKCI W
Sbjct: 3679 ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDE---VNCTCHSDHFSCGNGKCIMSRW 3735
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC C +C ++ CI ++ LCD DC ++ D +
Sbjct: 3736 KCDGWDDCL-DGSDESLETCAKTHCHANAFKCR-NQLCIRNSALCDGVNDCGENE--DES 3791
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +C + Q QC + CI + CD + +C VD +DE + C
Sbjct: 3792 DAVCAALPKCRHDQFQCE-NDDCISKAFRCDGQYNC-----VDGSDE----------MNC 3835
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3836 QPPVCGFGSCSQICIEKKAGHFNCKCTDGYHKGP 3869
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPESWKCDGFVDCLE-D 233
C+ + CD K DC + DEG C +C GQF CG + CIP +W CDG DC + D
Sbjct: 39 CIPMRWKCDSKADCPDMSDEGSDCAEAPKCNEGQFRCGASRHCIPNNWLCDGEFDCGKGD 98
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SDE P+ +C + QC + C+ + CD DC D++
Sbjct: 99 TSDELNCPHGATPKCRAFEGQCR-NGDCLELSRFCDGRWDCDNDEL 143
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1451 RIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1510
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1511 VLRNKEI 1517
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 4034 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4093
Query: 164 L 164
+
Sbjct: 4094 V 4094
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 108 LEKAGMHGENRSPLVTKNI----QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L I QWP SL +D LYWCD L+T+E +++DG+ V
Sbjct: 736 IYSAWMDGTHKELLAKGTIAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTGREV 795
Query: 164 LCHPNELRCGSSNQCVALSKFCDGK 188
L ++ S Q L + D K
Sbjct: 796 LFKSDQFHPYSIVQSNGLIYWADNK 820
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++++ + G ++ +I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2405 IQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAH 2463
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
L ++ + G NR+ LVT+ + PSS+ +D +++YW D + + V V +G + L P
Sbjct: 401 LSRSLLDGSNRTVLVTEQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 460
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
+C GQ +C S+ CIP+NWLCD E DC D D
Sbjct: 67 KCNEGQFRCGASRHCIPNNWLCDGEFDCGKGDTSD 101
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+ + R D + + HP+ L CG S CV + + CDGK DC + DEG C
Sbjct: 1170 INASRFDMNETVICEHPDRL-CGFSKLCVTVDQLCDGKNDCEDTTDEGFLC 1219
>gi|312381670|gb|EFR27366.1| hypothetical protein AND_05975 [Anopheles darlingi]
Length = 4689
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 149/306 (48%), Gaps = 29/306 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ E +K
Sbjct: 1140 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCLANQFKCADLRQCVEEPYK 1199
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD DC DGSDE PN C + +C S CIP W CD DC
Sbjct: 1200 CDSIPDC-NDGSDELGCPTVEPNQCNQE---KHFRCRASGVCIPIAWHCDGSNDCD---- 1251
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D++DE+ C NG +C S+ C+ +++CD DC D +DE +
Sbjct: 1252 -DHSDEEECGRITCPNGFYKCRNSR-CVYKSYICDGRDDCG-----DGSDESVEHACVSP 1304
Query: 337 AVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSP 393
V C + C G + +CV L+ CD PDC NG DEG C+ A C++ C++ C
Sbjct: 1305 PVRCPHGQWPCPGVTGRCVNLTSVCDDTPDCPNGADEGLGCD-LAQCQHQAGLCTNGCQK 1363
Query: 394 TPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
TP GA+C CP G+ P+ C D DEC G C Q CTNT SY CSC +GY L P+
Sbjct: 1364 TPLGALCICPPGEELGPDGRTCQDLDECAPPGLCSQRCTNTKGSYFCSCVDGYVLEPNKH 1423
Query: 452 SCTAVN 457
+C AVN
Sbjct: 1424 TCKAVN 1429
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/379 (32%), Positives = 172/379 (45%), Gaps = 78/379 (20%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGM-----GK 216
V C +C S +C+ + C+ + DC GEDE C EC PGQ SCG
Sbjct: 35 VPCPFGTFKC-SEGKCIPQTSVCNYQKDCDKGEDEFNHCPPPECEPGQISCGQYVFNKTY 93
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-------ALSKK-----CIPHNWL 264
CIP +KCD +DC+ DG+DE + +C ++C ALS + C+P
Sbjct: 94 CIPPHYKCDMTIDCV-DGTDESDCTYRKCQADDIRCGTPAQGIALSGRGTADICVPKEKR 152
Query: 265 CDEEMDCST-----------------------------------DDIVDNTDEDWDKFHQ 289
CD +DC T +D DN+DE F
Sbjct: 153 CDGYLDCRTGKDEEGCPGSACRLDQFRCANGARCIDTALKCNHKNDCGDNSDEVGCNFPP 212
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-- 347
C GQ +CA + CIP + CD DCS D +DE + A+ C N+ C
Sbjct: 213 CHGGQFRCA-NALCIPATFHCDGYHDCS-----DESDET-----NCTAIACPDNKFLCPR 261
Query: 348 GSSN---QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPA 404
G N +C+ +K CDGK DC +G DE C+ A C L C HKC P+ G +C+CP
Sbjct: 262 GGPNGQAKCIMKAKLCDGKRDCEDGTDEETACST-ASCPALGCEHKCGPSLTGGICYCPP 320
Query: 405 GQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G+ +P+ C D DEC + G CDQ CTNT S+ C+C GY L + + C A P
Sbjct: 321 GRTLSPDNRTCADLDECSVWGHCDQLCTNTDGSFSCACATGYQL-IETQRCVA---PTAS 376
Query: 463 PASIIFSSTVDIRRIHLNG 481
++F+ I R+ +G
Sbjct: 377 SLELVFAYDRAIVRMSAHG 395
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 161/421 (38%), Gaps = 120/421 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------- 199
C PN L+C +N CV CDG DC + DE P
Sbjct: 2831 CPPNHLKCDRTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQNSFRCPNHRCIPATW 2890
Query: 200 -----------------FCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
+C +E C F+C G CIP + CDG DCL D SDE
Sbjct: 2891 YCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCDNGNCIPRIYICDGDNDCL-DSSDEDG 2949
Query: 240 TCIHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
HQC + + C +K +CIP W+CD + DC VD DE+ + H
Sbjct: 2950 R--HQCNDRKCDDDTEFTCDENKAWARAQCIPRKWICDGDPDC-----VDGADENTTRHH 3002
Query: 289 -----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----------KYF 333
C + Q CA + +CI W+CD + DC D +DE + F
Sbjct: 3003 CPSPQPCADDQFTCA-NGRCINRGWVCDHDNDCG-----DGSDEGKSCNSQYKTCTPQEF 3056
Query: 334 SHNAVLCHPNELRCG----------------------------SSNQCVALSKFCDGKPD 365
+ C N+ RC +S QC+ C+ PD
Sbjct: 3057 TCQNFKCIRNQYRCDGEDDCGDHSDEVGCRKENATCPDGKFTCTSGQCIDYQLVCNKVPD 3116
Query: 366 CSNGEDEGPFCNNK--ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL- 420
C++ DE CN A E +C HKC T G C C G + C D DEC+
Sbjct: 3117 CADESDEPLHCNVDECAKVEIHRCGHKCVDTLTGYYCDCNQGYKLLEDGKACADIDECIE 3176
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G C Q C+NT Y C C E Y R + + T + EP +IFS+ +R + ++
Sbjct: 3177 TPGVCSQHCSNTPGGYYCKCDERYYERQNDEH-TCKRKDRTEPW-LIFSNKYYVRNMSID 3234
Query: 481 G 481
G
Sbjct: 3235 G 3235
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 156/369 (42%), Gaps = 74/369 (20%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKC 217
C+P + +C ++N+C+ CD DC +G DE G + EC+ +F C GKC
Sbjct: 3739 CNPETDFKC-NNNRCIPRQWMCDFADDCGDGSDEADGQCKGRY--RECSESEFRCENGKC 3795
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
I W+CD DC D SDE QC NG QCA S CI + CD + DC
Sbjct: 3796 ISSRWRCDHEDDC-GDNSDEYGCEGFQCKNGTFQCA-SGHCIASYFRCDGDRDCR----- 3848
Query: 278 DNTDE-----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC---------------- 316
D +DE + C + QC + C+ + LCD DC
Sbjct: 3849 DMSDEIGCPPRFPGGRYCPESRFQCK-NNLCVLPSDLCDGTDDCGDGSDEAASVCTNFNC 3907
Query: 317 --------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-------SSNQCVA 355
+ I D D D +N LC + C ++ +C+
Sbjct: 3908 DTLRRFQCANHRCVARYQICDGVDNCGDGSDENNMTLCAARQKPCDLYTQYQCANRKCIE 3967
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QNP 408
++ CD DC +G DE C++ + C + C H+C + T G +C C AG
Sbjct: 3968 RAQICDYADDCGDGSDE-LGCHHTSSCTAVARGGCEHQCVNLTDGGYICACHAGFIIDAG 4026
Query: 409 NKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV-NVPQDEPASI 466
NK +C D DEC C CTN + +Y CSC EG+ L S + V V +D+P +
Sbjct: 4027 NKKRCTDIDECATGTHGCSHLCTNLNGTYECSCREGFQL---SDSVSGVCRVLRDDPL-L 4082
Query: 467 IFSSTVDIR 475
+ S +IR
Sbjct: 4083 VLSGGTEIR 4091
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/246 (34%), Positives = 113/246 (45%), Gaps = 40/246 (16%)
Query: 165 CHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
C + RCG +++ C+ CDG+ DC + DE C A C G F CG G C P +
Sbjct: 3544 CTAGQHRCGGTDEKCIPWFWRCDGESDCKDASDEPDSCPARHCRAGTFQCGNGNCTPSTT 3603
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DG+DE +C C +C S +CI +W CD + DC D +DE
Sbjct: 3604 ICDGTDDC-GDGTDE-QSCDLPCPVSDFKCKSSGRCILDSWKCDGDADCK-----DGSDE 3656
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D ++ + +CIP W+CD + DC D++DE N C
Sbjct: 3657 D---------PEICPDKNGRCIPKLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTT 3699
Query: 343 NELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHKCSPT 394
RC G SN +C+ FCDGK DC + DE P CN + D C N +C
Sbjct: 3700 GWSRCPGQSNYRCIPRWLFCDGKDDCRDKSDELPENCPQCNPETDFKCNNNRC------I 3753
Query: 395 PRGAMC 400
PR MC
Sbjct: 3754 PRQWMC 3759
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 141/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E+A + G R L++ I +P ++ + N +YW D L N +
Sbjct: 2580 VREKIERAQLDGRGREVLISATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANVI 2636
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGEDE 197
E V R++ S + + + +N C + C +G+P+C + +E
Sbjct: 2637 EMVKRLEDSPRDIHIYSASRQKCQANPCQQNNGGCAQSCHPGPNGQPECRCDDATKPVNE 2696
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC + ++ N C H C + +C
Sbjct: 2697 GRMCAPRNHTCDASKFYCQNGKCISRMWSCDGDDDCGDGSDEDTNYCAFHSCAPNEFRCN 2756
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE+ + C G+ C + +CIP +C+
Sbjct: 2757 -NGRCIFRSWKCDHENDCK-----DGSDEEGCSYPPCMEGEFTCG-NGRCIPQAQVCNGI 2809
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C PN L+C +N CV CDG DC + DE
Sbjct: 2810 NDCKDNGTSDETHER-----CPTNTTCPPNHLKCDRTNICVEPYWLCDGDNDCGDNSDEN 2864
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2865 PLHCAQRTCPQNSFRCPNHRCIPA 2888
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 90/198 (45%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S CDG DC + DE C C +F C G+CIP +++CD DC D S
Sbjct: 1032 RCIPKSWICDGDDDCLDNSDEEQNCTKPTCGTNEFQCKSGRCIPLNFRCDQENDC-GDHS 1090
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKFHQCFNGQ 294
DE C Q C + +CIP+ W CD E DC D +DE + C Q
Sbjct: 1091 DEFECANVTCAASQFACE-NGRCIPNIWKCDSENDCG-----DGSDEGPFCAEKTCAYFQ 1144
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C + CIP +W+CD + DC D DE + C N+ +C QCV
Sbjct: 1145 FTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK-----DCPPITCLANQFKCADLRQCV 1194
Query: 355 ALSKFCDGKPDCSNGEDE 372
CD PDC++G DE
Sbjct: 1195 EEPYKCDSIPDCNDGSDE 1212
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 103/219 (47%), Gaps = 36/219 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPE 220
A C +CG+ N C + CDG DC +G DE C+ C F C G+CI +
Sbjct: 3583 ARHCRAGTFQCGNGN-CTPSTTICDGTDDCGDGTDEQS-CDLPCPVSDFKCKSSGRCILD 3640
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
SWKCDG DC +DGSDE P C + NG +CIP W+CD + DC D+
Sbjct: 3641 SWKCDGDADC-KDGSDEDPEICPDK--NG--------RCIPKLWMCDFDNDCG-----DD 3684
Query: 280 TDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3685 SDEPAYMCRQRNCTTGWSRCPGQSNYRCIPRWLFCDGKDDCR-----DKSDE-----LPE 3734
Query: 336 NAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
N C+P + +C ++N+C+ CD DC +G DE
Sbjct: 3735 NCPQCNPETDFKC-NNNRCIPRQWMCDFADDCGDGSDEA 3772
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+CG G+CIP++ C
Sbjct: 2748 CAPNEFRC-NNGRCIFRSWKCDHENDCKDGSDEEGCSYPPCMEGEFTCGNGRCIPQAQVC 2806
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++G SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2807 NGINDCKDNGTSDETHERCPTNTTCPPNHLKCDRTNICVEPYWLCDGDNDCG-----DNS 2861
Query: 281 DEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ Q C +C + +CIP W CD + DC ++ +Y
Sbjct: 2862 DENPLHCAQRTCPQNSFRCP-NHRCIPATWYCDGDDDCGD------GADEPPEYCKSEGR 2914
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C + C + N C+ CDG DC + DE + + C + KC
Sbjct: 2915 TCFGDLFTCDNGN-CIPRIYICDGDNDCLDSSDE----DGRHQCNDRKC 2958
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++T NI WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3358 LQAYIAKMGMDGSNFSRILTWEDNIAWPNALTIDYFTDRIYWADAHLDYIAFADLEGRHR 3417
Query: 162 AVL 164
++
Sbjct: 3418 HIV 3420
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD--ILYWCDSHLNTVESVRVDGS----- 159
++E + M G R P++T+ I+ P+ L IDY Q+ ++YW D+ LNT+E ++ DG+
Sbjct: 4232 KIEISWMDGSKRRPIITEAIRHPAGLTIDYAQEHHMVYWVDTKLNTIEVMKPDGTMRRTV 4291
Query: 160 -HNAVLCHPNEL 170
+L HP L
Sbjct: 4292 LKGELLKHPVSL 4303
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V +++ PS L IDY+ +LYW D+ +E ++DG
Sbjct: 2535 FGTSGKIFRTTMAGSLKRAIVDRDLSQPSGLAIDYDDRMLYWTDAVREKIERAQLDGRGR 2594
Query: 162 AVL 164
VL
Sbjct: 2595 EVL 2597
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQ 75
+ N E + S ++ V+ DW + Y+ GT + + RN S +
Sbjct: 750 VHRNGTGREIVLASQNEGVEGLAVDWVSKNLYYIDSRKGTLNV---LSTRNTSYRRTLLK 806
Query: 76 NVSSVRLRCAQIND---LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N+ R N + WD PA + +A G + WP+ L
Sbjct: 807 NLKRPRAIVVHPNRGYLYFSEWDRPA--------NISRANADGTGLMVFRNVTLGWPNGL 858
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 859 SIDFREDRVYWCDALLDHVQHANLDGT 885
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 9/125 (7%)
Query: 43 DW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
DW + YF + + + + + ++ N + L I LL D
Sbjct: 2162 DWVAGNLYFTNVFPHENYVEVAWLDGTHRKVLVRTTNDAPRELAVNPIKRLLYWIDYGQ- 2220
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
FP R+ K + G N +P+VT I P L +D +YW DS L+ ++ V G
Sbjct: 2221 --FP---RIGKCHLDGGNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKVSYSGG 2275
Query: 160 HNAVL 164
+ V+
Sbjct: 2276 NRQVI 2280
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 62/141 (43%), Gaps = 19/141 (13%)
Query: 27 EEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQS-LCFIQQQNVSSVRLRCA 85
+E+ + D+V+ DW L+ + +E H N S + ++N++ R C
Sbjct: 1495 QELITTGLDLVEGLAYDWIGQNLYWLD-SKLNTIEVAHENGSNRLVLVRENITQPRGMCL 1553
Query: 86 QINDLLNSWDLPAPEIFPL-------DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ 138
PAP L + R+E+ G+ G R+ +++ I WP+ L +D
Sbjct: 1554 D----------PAPSARWLFWTDWGENPRIERIGLDGTMRATIISTKIYWPNGLTLDVAT 1603
Query: 139 DILYWCDSHLNTVESVRVDGS 159
+Y+ DS L+ ++ +G+
Sbjct: 1604 QRVYFADSKLDFIDFCYYNGT 1624
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD + +K+ + +N + + N + + +++Q + V + + + + ++
Sbjct: 1413 VDGYVLEPNKHTCKAVNHSAAFLIISNRHSILVADLREQGLERVPIIVENV--VATASNM 1470
Query: 97 PAPEIFPLDERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L+K + P L+T + L D+ LYW DS LNT+E
Sbjct: 1471 HTGTIFWSDMKLKKISRLDRGQEPQELITTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVA 1530
Query: 155 RVDGSHNAVLCHPN 168
+GS+ VL N
Sbjct: 1531 HENGSNRLVLVREN 1544
>gi|426337621|ref|XP_004032799.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like,
partial [Gorilla gorilla gorilla]
Length = 902
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 159/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 130 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPRCE--QLTCDNGACYNTSQKC 186
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIP ++CD + DC D +DE
Sbjct: 187 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPRAYVCDHDNDCQ-----DGSDEHA 238
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 239 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSPHDVHKCSPRE 292
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 293 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSTTL-CSALNCQYQCHETPYGGA 351
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP+G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 352 CFCPSGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 410
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 411 DSFGE--ASIIFSNGRDLLIGDIHG 433
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 204 ICLHNEFSCGSG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 262
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 263 CDGEDDCKDNGDEDGCESSPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 322
Query: 280 T 280
T
Sbjct: 323 T 323
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG + H
Sbjct: 559 KLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTVVH 618
Query: 167 PNEL 170
L
Sbjct: 619 GGSL 622
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L +D+ LYW D++ +
Sbjct: 820 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAVDWAASRLYWVDAYFD 871
Query: 150 TVESVRVDGSHNAVLCHPNEL 170
+E DG L H ++
Sbjct: 872 KIEHSTFDGLDRRRLGHIEQM 892
>gi|194890512|ref|XP_001977327.1| GG18978 [Drosophila erecta]
gi|190648976|gb|EDV46254.1| GG18978 [Drosophila erecta]
Length = 4502
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1001 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 1060
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D
Sbjct: 1061 CDGIPDC-NDGSDEVGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DY 1114
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1115 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 1162
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 1163 VPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDCPNGSDEGEGCD-LAECEHQAGQCSSF 1221
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + C+D++EC G C Q CTNT SY CSCT+GY L P
Sbjct: 1222 CQKTPNGALCVCPPGSEIGEDGYTCIDSNECDPPGLCSQQCTNTKGSYFCSCTDGYVLEP 1281
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1282 NKHTCKAVN 1290
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 133/267 (49%), Gaps = 29/267 (10%)
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CDG++DC G DE C Q +CA KCI C+ DC DN+DE
Sbjct: 4 RCDGYLDC-RTGRDEVGCTGVACRLDQFRCANGLKCIDAALKCNHRDDCG-----DNSDE 57
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
F C + Q +C + CIP+N+ CD DC+ D +DE + A+ C
Sbjct: 58 QGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DKSDE-----ANCTAIACPD 106
Query: 343 NELRC---GSSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
N+ C G+S +C+ S+ CDGK DC +G DE C+ A C L C KC P+ G
Sbjct: 107 NKHLCPRGGASGTPKCILKSQLCDGKRDCEDGSDEETNCS-IASCPALSCEFKCGPSLTG 165
Query: 398 AMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+C+C GQ+ P+ CVD DEC G CDQ CTNT SY C C +GYTL D K C A
Sbjct: 166 GVCYCKPGQSLAPDNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCAQGYTLINDSK-CIA 224
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNGS 482
P +IF+ I R+ +GS
Sbjct: 225 ---PDANNLQLIFAHDRAIMRMLPHGS 248
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 152/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2768 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2823
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI W+C
Sbjct: 2824 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWIC 2880
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + CD E DC
Sbjct: 2881 DHDNDCG-----DGTDEGKFCNSKYKTCSAQEFTCQ-NFKCIRNQSRCDGEDDCG----- 2929
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE + + C + C ++ QC+ S C+ PDC++ DE CN A
Sbjct: 2930 DHSDE---VGCTKENITCPQGQFAC-TNGQCIDYSLVCNKYPDCADESDEPAHCNVNECA 2985
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYV 437
E +C HKC T G C C G + C D DECL G+C Q C+NT +
Sbjct: 2986 KVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFY 3045
Query: 438 CSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + P +IF++ +R + ++G
Sbjct: 3046 CKCDETYYERQNDEHTCKRKDTI---PPWLIFTNKYYVRNMSVDG 3087
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 149/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2683 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2742
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2743 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2796
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2797 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2849
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2850 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEF 2908
Query: 382 -CENLKCSHK---------CSPTPRGAMCF-----CPAGQNP-NKTQCVD---------- 415
C+N KC C C CP GQ QC+D
Sbjct: 2909 TCQNFKCIRNQSRCDGEDDCGDHSDEVGCTKENITCPQGQFACTNGQCIDYSLVCNKYPD 2968
Query: 416 -ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ADE C ++ C C +T Y C C EGY L DGK+C V+ +
Sbjct: 2969 CADESDEPAHCNVNECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 3028
Query: 462 EPAS 465
+P +
Sbjct: 3029 QPGA 3032
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 158/374 (42%), Gaps = 76/374 (20%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIP 219
C+P + +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI
Sbjct: 3602 CNPETDFKCGN-NRCIPKQWMCDFADDCGDASDENEAVCKGRYRECSESEFRCGNGKCIS 3660
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC D SDE + +QC NG QCA S CI + CD + DC D+ D
Sbjct: 3661 SRWQCDHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCR--DMSDE 3716
Query: 280 TD--EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ C + QC + C+ + LCD TDD D +DED N
Sbjct: 3717 VGCPPRFPGGRYCPESRFQCN-NNLCVSLSDLCD-----GTDDCGDGSDEDPSVCSDFNC 3770
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------------------- 372
+C S+++CVA + CDG +C +G DE
Sbjct: 3771 DTLR--RFQC-SNHRCVARYQICDGVDNCGDGSDENNMTLCASKQKPCDLYTQYQCANKH 3827
Query: 373 ----GPFCNNKADCEN----LKCSH--KCSPTPRGA-------------MCFCPAG---Q 406
C+ DCE+ L C H CS RG +C C G
Sbjct: 3828 CIERSQVCDFSDDCEDASDELGCHHTSSCSEANRGGCQHHCHNLTDGGYICTCYPGYIIA 3887
Query: 407 NPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E
Sbjct: 3888 ADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHLT-DGAS--GVCRAEKEDVV 3944
Query: 466 IIFSSTVDIRRIHL 479
++F++ +IR + L
Sbjct: 3945 LVFANGQEIRGLDL 3958
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 92/194 (47%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP SW CDG DCL++ +E N C + + QC S +CIP N+ CD+E
Sbjct: 887 FTCNNQRCIPRSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQEN 945
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD------- 320
DC D++DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 946 DCG-----DSSDEQECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGDFCAEK 999
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C N+ +C QCV S
Sbjct: 1000 TCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESY 1059
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 1060 KCDGIPDCNDGSDE 1073
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 143/324 (44%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ + G+NR LV I +P ++ + N +YW D L N V
Sbjct: 2432 VREKIERSDLDGQNRELLVGATI-YPFAITVFRN--YMYWTDLQLRGVYRAEKHTGANMV 2488
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGEDE 197
E V R++ S + + E + + N C + C +GK +C + +E
Sbjct: 2489 EMVKRLEDSPRDIRIYSAERQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDDSTKVVNE 2548
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 2549 GRMCAPRNNTCEASKFYCKNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2608
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ C + +CIP +C+
Sbjct: 2609 -NGRCIFKSWKCDHENDCK-----DGSDELGCTYPPCVDGEFTCG-NGRCIPQAQVCNGV 2661
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2662 NDCKDNATSDETHERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2716
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2717 PLHCGQRTCPTNSFRCPNHRCIPA 2740
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 3476 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCYKRTCDPKTEFSCKNGRCIPQL 3535
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3536 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 3589
Query: 278 DNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + +C +C + +CIP W+CD DC D +DE+ +
Sbjct: 3590 DNSDELPENCPKCNPETDFKCG-NNRCIPKQWMCDFADDCG-----DASDEN-EAVCKGR 3642
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C++ CD + DC + DE
Sbjct: 3643 YRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3677
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 103/237 (43%), Gaps = 42/237 (17%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3405 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3463
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-- 289
D SDE N C C +C S +CI +W CD + DC D +DED ++
Sbjct: 3464 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCYKRT 3517
Query: 290 --------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C NG +CIP W+CD + DC D++DE N C
Sbjct: 3518 CDPKTEFSCKNG--------RCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CT 3561
Query: 342 PNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
RC G SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 3562 TGWQRCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 3618
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 112/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+CG G+CIP++ C
Sbjct: 2600 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCTYPPCVDGEFTCGNGRCIPQAQVC 2658
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2659 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2713
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2714 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2773
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2774 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2826
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2827 AQCIPKKWICDGDPDCVDGADENTTLHN 2854
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 3392 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 3449
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DC N D C +C S +CI +W CD + DC
Sbjct: 3450 CTPSATICDGVDDCGDRSDEQNCD------LPCPLSDFKCKSSGRCILDSWRCDGDADCK 3503
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED + C P + +C+ CD DC + DE +
Sbjct: 3504 -----DGSDEDPAVCYKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 3555
Query: 378 NKADC 382
+ +C
Sbjct: 3556 RQRNC 3560
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 4095 KIEVSWMDGSKRRPLITELIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 4154
Query: 166 HPNELR 171
++LR
Sbjct: 4155 RGDQLR 4160
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 3391 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 3445
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 3446 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 3493
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 3494 WRCDGDADCKDGSDEDPAVCYKRTCD 3519
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ + R + V C ++ RC + +C+ + C+ + DC + DE
Sbjct: 5 CDGYLD-CRTGRDEVGCTGVACRLDQFRCANGLKCIDAALKCNHRDDCGDNSDEQGCNFP 63
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-----ALSKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + + KC
Sbjct: 64 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKHLCPRGGASGTPKC 122
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 123 ILKSQLCDGKRDCE-----DGSDEE 142
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3210 LQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 3269
Query: 162 AVL 164
+
Sbjct: 3270 HTV 3272
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G +PLVT I P L ID +YW DS L+T++ + +G + V+
Sbjct: 2071 RIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGVNRKVI 2128
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 604 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 663
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 664 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGLLVFKNVTLGWPNGLS 713
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 714 IDFKEDRVYWCDALLDHVQHANLDGT 739
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G +
Sbjct: 1433 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1492
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1493 SSHYLLHPHSL 1503
>gi|345797263|ref|XP_535946.3| PREDICTED: low-density lipoprotein receptor-related protein 2
[Canis lupus familiaris]
Length = 4630
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 163/363 (44%), Gaps = 64/363 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C N+ C QC+ S CDG+ DC +G DE C C+ Q +C G+CIP ++
Sbjct: 51 CKVNQFLCHGEGQCIPNSWECDGERDCEDGSDEHQHCPGRTCSSQQITCSDGECIPNEYR 110
Query: 224 CDGFVDCLEDGSDEP------------------------------------NTCIHQCFN 247
CD DC DG+DE N C C +
Sbjct: 111 CDRVRDC-SDGTDEKDCHYPTCEQLTCANGACYNSSQKCDGKVDCRDFSDENNCTKVCSH 169
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ QC S CIP ++CD +DC D +DE + C Q CA S CI N
Sbjct: 170 HEFQCD-SGVCIPRAYVCDHYLDCE-----DGSDELSCTYETCRGNQFTCA-SGYCISQN 222
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+CD E DC DN DE+ + +H C+P E C S +C+ ++ CDG DC
Sbjct: 223 MVCDGENDCQ-----DNGDENGCESSTHRIHECYPGEWACPESGKCIPIANVCDGTLDCP 277
Query: 368 NGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADE 418
GEDE G +C+ C L C ++C +P G MC+CP G QN N CVD ++
Sbjct: 278 EGEDENNSTKGRYCDVNL-CSVLSCEYQCHMSPSGGMCYCPPGFIVDQN-NTHNCVDFND 335
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C I G CDQ C + + C C EGY L + C A E AS+IFS+ D+
Sbjct: 336 CQIWGVCDQMCEDRIGHHQCRCAEGYVLEHQ-RHCKANT--SSEQASVIFSNGRDLLIGD 392
Query: 479 LNG 481
++G
Sbjct: 393 IHG 395
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 139/300 (46%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C P++ RC ++C+ LS CDG DC +G DE C CT QF C +CI +
Sbjct: 1131 CLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDEAG-CVINCTASQFKCASEDRCISSIYH 1188
Query: 224 CDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE + C + QC CIP +W CD DC I+ +
Sbjct: 1189 CDGVFDC-SDQSDEIDCSTRPPGMCHPDEFQCQADGVCIPKSWECDGHQDC----ILGSD 1243
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ C C + CI +WLCD + DC D +DE K A C
Sbjct: 1244 EHHGCAPRTCPPSHFLCD-NGNCIYRDWLCDGDNDCR-----DMSDE---KDCPTQAFHC 1294
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ C + CV LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1295 PSWQWLCPGYSICVNLSAVCDGISDCPNGTDESPLCNQDSCSDSNGGCTHQCVQGPFGAQ 1354
Query: 400 CFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP+G N +KT C D DEC + G C Q C N S+ C C + YTL D ++C
Sbjct: 1355 CLCPSGYLLANDSKT-CEDIDECDVPGFCSQHCYNMRGSFRCWCDKEYTLDADRRTCKVT 1413
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/363 (29%), Positives = 156/363 (42%), Gaps = 56/363 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIPES 221
C +E C +S +C+ +CD + DC +G DE C A C +F C G+CI E
Sbjct: 2844 CSSDEFPC-TSGRCIPKHWYCDEEGDCPDGSDEPATCEYLEATCLSSEFKCDSGRCIREE 2902
Query: 222 WKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDD 275
W CDG DC + D + + H C + + CA S+KCIP +W+CD + DC+
Sbjct: 2903 WICDGDNDCGDMSDEDERHHCGNHNCSSSEFLCANNVPPSRKCIPKSWVCDGDADCT--- 2959
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS------------------ 317
D DE + + +G + C+PH++ CD DC
Sbjct: 2960 --DGYDEHQNCTRRSCSGNDFTCSNGLCVPHSYRCDRRNDCGDYSDERNCSYSTCSENQF 3017
Query: 318 ---------TDDIVDNTDE-----DWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDG 362
D+ D ++ D ++ H C P++ +C + N C+ ++K C+
Sbjct: 3018 TCQNGLCIYKQDVCDGENDCRDGSDELEHLCHTPETTCPPHQFKCDNGN-CIDMAKVCNH 3076
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADEC 419
DCS+ DE G N D C C+ T C C G +K C D DEC
Sbjct: 3077 LDDCSDNSDEKGCGVNECNDPLLSSCDQNCTDTLTSFYCSCRPGYKLMSDKRSCDDIDEC 3136
Query: 420 L-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C Q C N SY+C C GY PDGKSC + EP +IFS+ +R +
Sbjct: 3137 KETPFVCSQMCENVMGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYLRNLT 3193
Query: 479 LNG 481
+G
Sbjct: 3194 TDG 3196
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/349 (30%), Positives = 153/349 (43%), Gaps = 60/349 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C P ++C ++N C+ CD DC + DE P FC + C+ +F C G+CIP+ W
Sbjct: 2802 CQPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFCASHTCSSDEFPCTSGRCIPKHW 2861
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC + C + + +C S +CI W+CD + DC D+ D
Sbjct: 2862 YCDEEGDC-PDGSDEPATCEYLEATCLSSEFKCD-SGRCIREEWICDGDNDCG--DMSDE 2917
Query: 280 TDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----- 330
+ H C + + CA S+KCIP +W+CD + DC+ D DE +
Sbjct: 2918 DERHHCGNHNCSSSEFLCANNVPPSRKCIPKSWVCDGDADCT-----DGYDEHQNCTRRS 2972
Query: 331 ---KYFSHNAVLCHPNELRCGSSNQC--------------------------VALSKFCD 361
F+ + LC P+ RC N C + CD
Sbjct: 2973 CSGNDFTCSNGLCVPHSYRCDRRNDCGDYSDERNCSYSTCSENQFTCQNGLCIYKQDVCD 3032
Query: 362 GKPDCSNGEDEGP-FCNNKADC---ENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDA 416
G+ DC +G DE C+ KC + C + N ++ C
Sbjct: 3033 GENDCRDGSDELEHLCHTPETTCPPHQFKCDNGNCIDMAKVCNHLDDCSDNSDEKGC-GV 3091
Query: 417 DEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+EC + SCDQ CT+T S+ CSC GY L D +SC ++ ++ P
Sbjct: 3092 NECNDPLLSSCDQNCTDTLTSFYCSCRPGYKLMSDKRSCDDIDECKETP 3140
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 140/340 (41%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ I+WP+ + IDY D+LYW D+H
Sbjct: 3326 IGRIGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGRHRHTVYDR 3385
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS +L HP
Sbjct: 3386 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRIILVNTTHKPFDIHVYHPYRQPFV 3445
Query: 171 --RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCGMG- 215
CG++N S C K + E P C C+ QF C
Sbjct: 3446 NNPCGTNNG--GCSHLCLIKAGGNGFTCECPDDFHTLRMGDMNICLPRCSSTQFLCANSE 3503
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
KCIP WKCDG DC DGSDEP C + C GQ QC C ++LC+ DC
Sbjct: 3504 KCIPIWWKCDGQRDC-SDGSDEPVLCPQRYCRLGQFQCK-DGNCTSSHFLCNAHQDCP-- 3559
Query: 275 DIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED + H+C + + QCA +K+CIP W CD E DC DN+DED
Sbjct: 3560 ---DGSDEDQILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSDED---V 3607
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + +C P +C ++N C+ CD DC + DE
Sbjct: 3608 YNCASRICQPGYFKC-ANNHCIPQDWKCDVDNDCGDYSDE 3646
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 103/213 (48%), Gaps = 20/213 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C +S +C+ + CDG+ DCS+G DE C C GQF C G C +
Sbjct: 3492 CSSTQFLCANSEKCIPIWWKCDGQRDCSDGSDEPVLCPQRYCRLGQFQCKDGNCTSSHFL 3551
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE H+C + + QCA +K+CIP W CD E DC DN+D
Sbjct: 3552 CNAHQDC-PDGSDEDQILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSD 3604
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C G +CA + CIP +W CD + DC D +DE + SH
Sbjct: 3605 EDVYNCASRICQPGYFKCA-NNHCIPQDWKCDVDNDCG-----DYSDEPMPECMSHRCD- 3657
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3658 -NHTEFSCRTNYRCIPQWSVCNGFDDCRDNSDE 3689
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
S+ +CV + CDG DC + DE G N C P F+CG G+CIP WKCD DC
Sbjct: 1016 SNGRCVPSNYRCDGVDDCHDNSDEHLCGKM-NNTCAPSAFTCGHGECIPAHWKCDKQSDC 1074
Query: 231 LEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
+ DGSDE P+ C C + CIP +WLCD + DC+ D +DE +F
Sbjct: 1075 V-DGSDEQNCPSQAPTSCPASFFTCD-NHLCIPRSWLCDTDNDCA-----DGSDEKNCQF 1127
Query: 288 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+ C Q +C +CI +++CD + DC VD +DE + + C ++ +
Sbjct: 1128 TETCLPSQFRCP-DHRCIDLSFVCDGDKDC-----VDGSDE------AGCVINCTASQFK 1175
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C S ++C++ CDG DCS+ DE
Sbjct: 1176 CASEDRCISSIYHCDGVFDCSDQSDE 1201
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 136/323 (42%), Gaps = 18/323 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC C+ CD DC + DE C PG F C G C+ E KC
Sbjct: 3737 CSESEFRC-DDQSCIPSRWVCDHTNDCGDNSDERDCEMKTCQPGYFQCQSGHCVSEQVKC 3795
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D SDE TC + NG A +C H + DD D +DE+
Sbjct: 3796 DGTADCL-DASDEA-TCPTRFPNGAYCSATMFECKNHVCVRSSWKCDGDDDCGDGSDEE- 3852
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H C + + +C + + E+ DD D +DE ++ + + C NE
Sbjct: 3853 --LHLCLDVSCESPNRFRCDNNRCIYKHELCNHVDDCGDGSDEKEEQCLASTSRPCTENE 3910
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFC 402
+C S+ C++ + CD DC + DE G + C C C+ G +C C
Sbjct: 3911 FKC-SNGHCISQNLVCDDVDDCGDHFDETGCNTGKERSCAENLCEQNCTQLNEGGFICSC 3969
Query: 403 PAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVN 457
G ++ C D +EC G C Q C NT SY CSC EG+ D GK C A
Sbjct: 3970 RPGFKASILDRNSCDDINECEQFGVCPQNCQNTKGSYECSCAEGFRSVSDQYGKRCAA-- 4027
Query: 458 VPQDEPASIIFSSTVDIRRIHLN 480
P ++ V IR+ +L+
Sbjct: 4028 --DGNPPLLLLPENVRIRKYNLS 4048
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 136/347 (39%), Gaps = 91/347 (26%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL----------------------- 141
+ ++E+A + G R P+V ++ WP+ L +DY D+L
Sbjct: 2509 NAKIERATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADASLQKIERSTLTGTQREVI 2568
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGSSNQC 178
YW D + + + DGS + PN +R NQ
Sbjct: 2569 VNTAFHPFSLTLYGQYIYWTDWNTKRIYRANKYDGSGQTAMTTSFPFRPNGIRVVVKNQQ 2628
Query: 179 VALSKFC-DGKPDCS-------NGED-----EGPFCNA------------ECTPGQFSCG 213
S C + CS NG + EG + A C +F+C
Sbjct: 2629 QQCSNPCSEFNGGCSHICAPGPNGAECQCPHEGHWYLANNKKHCIVDNGTRCDSSKFTCL 2688
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G CI E WKCD DC DGSDE + H C CA + +C+ +++ CD DC
Sbjct: 2689 NGHCILEQWKCDNDNDC-GDGSDELESVCAFHTCQPTAFTCA-NGRCVQYHYRCDHYNDC 2746
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DN+DE F +C N V+ S ++CIP ++C+ +C +D D +
Sbjct: 2747 G-----DNSDEAGCLFREC-NATVEFTCSNRRCIPLQFVCNGINNCHDNDTSDEKN---- 2796
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC 376
+ C P ++C ++N C+ CD DC + DE P FC
Sbjct: 2797 ----CSDRTCQPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFC 2839
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 80/170 (47%), Gaps = 21/170 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F C G+CI SW+CDG DCL+D +DE C Q C +CIP++W
Sbjct: 11 ECGSEDFRCEDGQCISASWRCDGTRDCLDD-TDEIGCPPPSCKVNQFLCHGEGQCIPNSW 69
Query: 264 LCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD E DC D +DE C + Q+ C+ +CIP+ + CD DCS
Sbjct: 70 ECDGERDCE-----DGSDEHQHCPGRTCSSQQITCS-DGECIPNEYRCDRVRDCS----- 118
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D TDE Y + + C ++ C S+ CDGK DC + DE
Sbjct: 119 DGTDEKDCHYPTCEQLTC--------ANGACYNSSQKCDGKVDCRDFSDE 160
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 103/412 (25%), Positives = 157/412 (38%), Gaps = 92/412 (22%)
Query: 32 STDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVS 78
+ ++ + +D D FK+ +NGT L N +SL F +++S
Sbjct: 732 AKENTIFFSDTSKDMIFKQNINGTGREILTANRVESVESLTFDWISKNLYWTDASYRSIS 791
Query: 79 SVRL----RCAQINDLLNSWDLP----APEIFPLD----ERLEKAGMHGENRSPLVTKNI 126
+RL R A I +L N + A IF D ++ +A G N P+V +
Sbjct: 792 VMRLADKSRRAIIQNLNNPRSIVVHPIAGYIFFTDWFRPAKIMRAWSDGSNLLPIVNTTL 851
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHPNEL---------- 170
WP+ L ID+ LYW D+ + +E DG H + HP L
Sbjct: 852 GWPNGLAIDWGALRLYWIDAFFDKIEHSTFDGLDRRNLGHIQQMTHPFGLTVFEDHVFFT 911
Query: 171 --RCGSSNQC------------VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
R G+ + ++ K +N + +CN P
Sbjct: 912 DWRLGAIVRVRKTDGGDMRVIRSGITNIMHVKSYDANTQIGSNYCNRPTHPNGDCSHFCF 971
Query: 217 CIPESWKCDG----------FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+P + G + C ED S EP + QC + C+ + +C+P N+ CD
Sbjct: 972 PVPNFQRVCGCPYGMNLTSNHLTCQEDPSHEPP--MEQCGSLSFPCS-NGRCVPSNYRCD 1028
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDD 320
DD DN+DE H C CA S +CIP +W CD++ DC
Sbjct: 1029 -----GVDDCHDNSDE-----HLCGKMNNTCAPSAFTCGHGECIPAHWKCDKQSDC---- 1074
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
VD +DE S C + C ++ C+ S CD DC++G DE
Sbjct: 1075 -VDGSDE--QNCPSQAPTSCPASFFTC-DNHLCIPRSWLCDTDNDCADGSDE 1122
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S R++ A+++ W D PA + + + ++E A M
Sbjct: 4134 IYWSDAKSKRIQVAKLDGRYRKWLISTGLDQPAAVVVNPKLGLMYWTDWGREPKIESAWM 4193
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G++R LV +N+ WP+ L IDY N D +YW D N +E+++ DG+ ++
Sbjct: 4194 DGQHRKTLVQENLGWPTGLAIDYLNNDRIYWSDFKENNIETIKHDGTDRRIV 4245
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WPS + IDY +LY+ DS+L+ ++ DG H
Sbjct: 1560 RIERASMDGSLRTVIVQDKIFWPSGITIDYPNRLLYFLDSYLDYIDYCDYDGQHRRQVIA 1619
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1620 SDLILRHPYAL 1630
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW D + +E+V DG
Sbjct: 512 ESLSGEPKLERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWVDCRFDYIETVTYDGI 571
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 572 QRKTVIHGGSL 582
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 109/297 (36%), Gaps = 69/297 (23%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + + C S +CIP +W CDEE DC D +DE
Sbjct: 2842 HTCSSDEFPCT-SGRCIPKHWYCDEEGDCP-----DGSDE-------------------- 2875
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENR 118
+ C + S +C + W D ++ DER G H +
Sbjct: 2876 ----PATCEYLEATCLSSEFKCDSGRCIREEWICDGDNDCGDMSDEDER-HHCGNHNCSS 2930
Query: 119 SPLVTKNIQWPS------SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
S + N PS S V D + D D H N C N+ C
Sbjct: 2931 SEFLCANNVPPSRKCIPKSWVCDGDADCTDGYDEHQNCTRRS----------CSGNDFTC 2980
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S+ CV S CD + DC + DE + C+ QF+C G CI + CDG DC
Sbjct: 2981 -SNGLCVPHSYRCDRRNDCGDYSDERNCSYSTCSENQFTCQNGLCIYKQDVCDGENDC-R 3038
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE--MDCST-----DDIVDNTDE 282
DGSDE H C + C PH + CD +D + DD DN+DE
Sbjct: 3039 DGSDELE---HLCHTPETTCP------PHQFKCDNGNCIDMAKVCNHLDDCSDNSDE 3086
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 52 LNGTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ + +L L +NQ + Q N+ SV + I L +D + +F D
Sbjct: 1412 VTASESLLLLVASQNQIVADNITSQVHNIYSVVRNGSHIVAL--DFDSISGRVFWSDGSQ 1469
Query: 107 -RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++ A +G +R ++ + S+V+D+ LYW D L T+E ++DGSH VL
Sbjct: 1470 GKIWSAFQNGTDRRVILNSGVTMTESIVVDWVGRNLYWTDYALETIEVSKLDGSHRTVLI 1529
Query: 166 HPN 168
N
Sbjct: 1530 SKN 1532
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + H+ S P G + Q C D + G C+ C +H
Sbjct: 610 NKFTETNPQEYHQTSLRPFGVTVYHSLRQPYVSNPCRDNN-----GGCEHVCVLSHRTDN 664
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C CT G++L D + C AV +IFSS V +R I N S
Sbjct: 665 DGLGYRCRCTLGFSLDVDNRHCVAVK------QFLIFSSEVAVRGIPFNLS 709
>gi|344240337|gb|EGV96440.1| Low-density lipoprotein receptor-related protein 4 [Cricetulus
griseus]
Length = 766
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 156/321 (48%), Gaps = 29/321 (9%)
Query: 156 VDGSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
DGS P E LRC + +C+ S CDGK DC + DE +C+ +F C
Sbjct: 27 TDGSDELGCWRPAEDCSLRCDNKTRCIPKSWRCDGKLDCLDRRDEQGCIREKCSSSEFQC 86
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G+CI S CDG DCL+ +E +C G+++C S +C+ W+CD ++DC
Sbjct: 87 ENGQCISSSLHCDGNRDCLDHSDEEGCPVALRCPEGEMKCPESGECVLAEWICDHDVDCK 146
Query: 273 TDDIVDNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D TDE K C Q C +C+P W CD + DC D++DE
Sbjct: 147 -----DGTDEKNCDSKVLPCGPRQWACGSGDECVPDFWHCDGQSDCR-----DSSDE--- 193
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
+ C +E +C ++ C++ S CDG+ DC++G DEG C++ C +C H
Sbjct: 194 --AECAPLKCLDSEFQC-ATGACLSFSMVCDGREDCADGSDEGGECSSSV-CSPGRCYHS 249
Query: 391 CSPTPRGAMCFC-PAGQNPNKTQ-CVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTL 446
C +P G +C C P Q + Q C D +EC C QTC NT SY+C+C GY L
Sbjct: 250 CYLSPAGPVCACGPGFQLESSGQICQDVNECQQPAGRPCSQTCINTEGSYICACHPGYLL 309
Query: 447 RPDGKSCTAVNVPQDEPASII 467
PDG +C A EP ++
Sbjct: 310 GPDGHTCKATGA---EPILLV 327
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD + + ++ +G A+ C E++C S +CV CD DC +G DE C++
Sbjct: 98 CDGNRDCLDHSDEEGCPVALRCPEGEMKCPESGECVLAEWICDHDVDCKDGTDE-KNCDS 156
Query: 204 E---CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C P Q++CG G +C+P+ W CDG DC D SDE +C + + QCA + C+
Sbjct: 157 KVLPCGPRQWACGSGDECVPDFWHCDGQSDC-RDSSDEAECAPLKCLDSEFQCA-TGACL 214
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE 282
+ +CD DC+ D +DE
Sbjct: 215 SFSMVCDGREDCA-----DGSDE 232
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 98/288 (34%), Gaps = 90/288 (31%)
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIP 305
G QC KCI + CD C+ D +DE W C ++C +CIP
Sbjct: 3 GVFQCLDGSKCIEERYHCDGAQQCT-----DGSDELGCWRPAEDC---SLRCDNKTRCIP 54
Query: 306 HNWLCDEEMDC----------------------------------STDDIVDNTDEDWDK 331
+W CD ++DC D +D++DE+
Sbjct: 55 KSWRCDGKLDCLDRRDEQGCIREKCSSSEFQCENGQCISSSLHCDGNRDCLDHSDEE--- 111
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------- 374
A+ C E++C S +CV CD DC +G DE GP
Sbjct: 112 -GCPVALRCPEGEMKCPESGECVLAEWICDHDVDCKDGTDEKNCDSKVLPCGPRQWACGS 170
Query: 375 ---------FCNNKADCENLKCSHKCSPTPRGAMCF-CPAGQNPNKTQCVDADECLIDGS 424
C+ ++DC + +C+P F C G + + D E DGS
Sbjct: 171 GDECVPDFWHCDGQSDCRDSSDEAECAPLKCLDSEFQCATGACLSFSMVCDGREDCADGS 230
Query: 425 ---------------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C +C + VC+C G+ L G+ C VN
Sbjct: 231 DEGGECSSSVCSPGRCYHSCYLSPAGPVCACGPGFQLESSGQICQDVN 278
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G +R LV + + P+S+ +D ++W D+ + + S +DGS +++
Sbjct: 465 QIEQAGMDGSSRKMLVNEGLGQPTSIALDQLSWKIFWSDAKFHCIGSANLDGSGISMM 522
>gi|307208125|gb|EFN85629.1| Low-density lipoprotein receptor-related protein 2 [Harpegnathos
saltator]
Length = 4539
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/345 (34%), Positives = 158/345 (45%), Gaps = 61/345 (17%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM-GKCIPE 220
V C N+ C ++N+C+ + CD + DC + DEG FC A+ C+ QF+C G CIP+
Sbjct: 1038 VTCSANQFAC-ANNRCIPATWKCDSENDCGDSSDEGEFCAAKTCSYFQFTCPRSGHCIPQ 1096
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC D DE + C + Q CA K C+ ++ CD DC +D D
Sbjct: 1097 SWVCDGDSDCF-DQQDEMDCPPVTCLSTQFTCADQKMCVLSSYKCDGISDC--NDGSDEV 1153
Query: 281 DEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDC----------------------- 316
QC + Q QC S CIP NW CD DC
Sbjct: 1154 GCPSLAPDQCNLDKQFQCVSSAICIPKNWYCDGTADCPDKSDEPESCGKIDCQPGFFRCQ 1213
Query: 317 ------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS--------SNQCVAL 356
DD D +DE+ + + C P +C S +N+C+
Sbjct: 1214 NDKCVFKAYICDGKDDCGDGSDENTELH------ACGPPPFKCDSQQWRCPNVTNRCIPT 1267
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAGQ--NPNKTQ 412
CDGKPDC NG DEG C+ ++C + C++ C TP GA C CPAG+ +
Sbjct: 1268 VNVCDGKPDCPNGGDEGFGCD-LSECTHQAGLCTNDCFQTPIGAQCSCPAGEELTSDGYT 1326
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C D +EC G C Q C NT SY C+C EGYTL D +C A N
Sbjct: 1327 CQDMNECEPPGRCSQICVNTKGSYYCNCVEGYTLEKDKHTCKAFN 1371
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/337 (33%), Positives = 156/337 (46%), Gaps = 44/337 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---- 216
C ++ CG + C+ + CD DC +G DE +C P F C +G
Sbjct: 15 CELGQITCGQYSFNKTYCIPPHQRCDMTVDCVDGTDEDGCTYRKCQPDDFRC-VGTTPEL 73
Query: 217 CIPESWKCDGFVDCLEDGSDEP----NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CIP+ +CDG++DC +G DE N C Q +C +++CI + C+ DC
Sbjct: 74 CIPKEKRCDGYLDC-RNGRDEEGCGNNMSKPACRLDQFRCNTTQRCIDQSARCNHRDDCG 132
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ F C + Q +CA + CIP + CD DC DN+DE
Sbjct: 133 -----DMSDEEHCSFPPCTSDQFRCA-NALCIPIAYQCDGYTDCH-----DNSDES---- 177
Query: 333 FSHNAVLCHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
S +C N+ C C+ S+ CD K DC +G DE C+ C L C
Sbjct: 178 -SCTMTVCPGNKFMCPKGAPDGKPMCINRSQLCDEKQDCEDGADEEAACSMSM-CGLLNC 235
Query: 388 SHKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
HKC +P G C+CP G+ N ++T CVD DEC G C+Q C NT SY+CSC GY
Sbjct: 236 QHKCQASPTGGACYCPEGRILANDSRT-CVDRDECSEWGFCEQLCDNTDGSYMCSCALGY 294
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
TL K C A N E ++ + + R+ G
Sbjct: 295 TLHGRNK-CRAQNFSSLE---LLLAQDRAVWRLSATG 327
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 150/362 (41%), Gaps = 86/362 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2760 CPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPVHCAQRTCPQNSFRCPNHRCIPATW 2819
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +DN
Sbjct: 2820 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2873
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED + HQC + + C +K +CIP WLCD + DC VD DE+
Sbjct: 2874 SDED--ERHQCNDRKCDEETEFTCTANKMWNRAQCIPKKWLCDGDPDC-----VDGADEN 2926
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C N+ C ++ +C+ S CD DC +G DEG FCN++
Sbjct: 2927 VTLHHCPAPTPCGDNQFTC-NNGRCLNRSWLCDHDNDCGDGSDEGNFCNSQYKHCNSQEF 2985
Query: 382 -CENLKCSHK--------------------------CSPTPRGAMCFCPAGQNPNKTQCV 414
C+N KC K P P+ MC A N +Q V
Sbjct: 2986 TCQNFKCIRKQFRCDGQDDCGDHSDEVGCPSKGKNTTCPNPKDFMC---ANGNCIDSQLV 3042
Query: 415 -----------------DADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+ DEC + C C +T S+ C C GY L DGK+C
Sbjct: 3043 CNKEPDCADESDEPLHCNVDECARIELNQCGHKCVDTPTSFYCECNPGYKLLDDGKACED 3102
Query: 456 VN 457
++
Sbjct: 3103 ID 3104
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 151/341 (44%), Gaps = 42/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPFCN-AEC-TPGQFSCGMGK---- 216
C + C + N C+ CDG DC ++ EDE CN +C +F+C K
Sbjct: 2845 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDERHQCNDRKCDEETEFTCTANKMWNR 2903
Query: 217 --CIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSKKCIPHNWLCDEEM 269
CIP+ W CDG DC+ DG+DE T H C + Q C + +C+ +WLCD +
Sbjct: 2904 AQCIPKKWLCDGDPDCV-DGADENVTLHHCPAPTPCGDNQFTCN-NGRCLNRSWLCDHDN 2961
Query: 270 DCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC D +DE ++ C + + C + KCI + CD + DC D++D
Sbjct: 2962 DCG-----DGSDEGNFCNSQYKHCNSQEFTCQ-NFKCIRKQFRCDGQDDCG-----DHSD 3010
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E N +P + C + N C+ C+ +PDC++ DE CN A E
Sbjct: 3011 EVGCPSKGKNTTCPNPKDFMCANGN-CIDSQLVCNKEPDCADESDEPLHCNVDECARIEL 3069
Query: 385 LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCT 441
+C HKC TP C C G + C D DEC+ C Q C NT SY C C
Sbjct: 3070 NQCGHKCVDTPTSFYCECNPGYKLLDDGKACEDIDECIETPQVCSQQCENTPGSYYCKCN 3129
Query: 442 EG-YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
E Y D +C + Q IIF++ +R + ++
Sbjct: 3130 ERWYEREADEHTCKRRDNIQ---PWIIFTNKYYVRNMSIDA 3167
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCI 218
A+ C E +C S+ +C+ S CDG DC +G DE P N C P +FSC GKCI
Sbjct: 3545 ALECGELEFKCKSNGRCIHDSWKCDGDADCKDGSDEDPVICHNRTCDPSTEFSCKNGKCI 3604
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTD 274
P+ W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3605 PKLWMCDSDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-- 3661
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----WD 330
D +DE + +C + +C+P WLCD DC D +DE D
Sbjct: 3662 ---DGSDERPENCPKCDPSMDFRCTNNRCVPKQWLCDFADDCG-----DGSDEAEAMCKD 3713
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
KY C +E +C + +C+A CD + DC +G DE
Sbjct: 3714 KYRE-----CSESEFKC-KNGKCIASRWRCDSEDDCGDGSDE 3749
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 103/228 (45%), Gaps = 21/228 (9%)
Query: 153 SVRVDGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQF 210
S+ DG C + RCG ++ C+ CDG+ DC +G DE C C P F
Sbjct: 3456 SLDKDGKTCIANCTAGQHRCGPPDEKCIPWYWRCDGEKDCKDGSDESSSCPPRNCGPSVF 3515
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C G C P CDG DC D SDE C +C + +C + +CI +W CD + D
Sbjct: 3516 QCANGNCTPTVTICDGSDDC-GDKSDEAK-CALECGELEFKCKSNGRCIHDSWKCDGDAD 3573
Query: 271 CSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
C D +DED H C + KCIP W+CD + DC D++DE
Sbjct: 3574 CK-----DGSDEDPVICHNRTCDPSTEFSCKNGKCIPKLWMCDSDNDCG-----DDSDEP 3623
Query: 329 WDKYFSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
N C RC G +N +C+ FCDGK DC +G DE P
Sbjct: 3624 AYMCRQRN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDERP 3668
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 148/331 (44%), Gaps = 32/331 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + +C+A CD + DC +G DE C F C G CI +C
Sbjct: 3718 CSESEFKC-KNGKCIASRWRCDSEDDCGDGSDEEECHRWVCKNDSFQCTSGHCIASYLRC 3776
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+G +C D SDE + C + QC + C+ +CD TDD DN
Sbjct: 3777 NGARNC-RDMSDEVDCPPRYPGGRYCPQSRFQCD-NNLCVAQTDICD-----GTDDCGDN 3829
Query: 280 TDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+DE+ F + + QCA + KCI LCD D+ D +DE+
Sbjct: 3830 SDENPTMCANFECDTHRRFQCA-NHKCIAKYQLCD-----GIDNCGDGSDENNMTICVKQ 3883
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCENLKCSHKC-SP 393
C P ++ +C+ K CD DC + DE +N+ + + C+H+C +
Sbjct: 3884 MRPCDPMSEYTCANKKCIERQKLCDLANDCGDLSDELGCHHNQHCLETDRGGCAHQCHNI 3943
Query: 394 TPRGAMCFCPAGQ--NP-NKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
T G +C C G +P N+ CVD DEC C CTN + SY CSC +G+ L D
Sbjct: 3944 TDGGYICACYPGYIISPDNRKHCVDIDECQTGQHQCSHICTNLNGSYACSCRQGFQLS-D 4002
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G S V +D+ ++F++ ++R L+
Sbjct: 4003 GHS--GVCRVEDDDVVVLFANGPEVRAYGLH 4031
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEE 268
F+C +C+P+SW CDG DCL D SDE C C + QC S +C+P + CD E
Sbjct: 966 FTCANQRCVPKSWVCDGENDCL-DNSDETQNCTKPTCGANEFQCK-SGRCVPITFHCDSE 1023
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C Q CA + +CIP W CD E DC D++DE
Sbjct: 1024 NDCG-----DYSDEMGCPNVTCSANQFACA-NNRCIPATWKCDSENDCG-----DSSDE- 1071
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + A C + C S C+ S CDG DC + +DE
Sbjct: 1072 -GEFCA--AKTCSYFQFTCPRSGHCIPQSWVCDGDSDCFDQQDE 1112
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSHNA 162
+ E++E++ + G NR LV+ I +P ++ + +YW D L V + + G+
Sbjct: 2509 VREKIERSDLEGNNREILVSATI-YPFAITVFRGH--IYWTDLQLRGVYRAEKHTGADKI 2565
Query: 163 VLCH-----PNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
L P +L S+ N C + CD G +C S +E
Sbjct: 2566 ELVKRLEDSPRDLHVFSAARQQCTVNPCNINNGGCDQSCHPGHNGSAECKCDDNSRLVNE 2625
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C +F+C G+CI W CDG DC + + + C H C + +C
Sbjct: 2626 NRMCVPKNVTCNDSKFACRNGRCISRMWACDGDDDCGDGSDENASYCSYHSCSPNEFRCN 2685
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2686 -NGRCIFKTWKCDHENDCR-----DGSDEEGCVYPPCALGEFTCA-NYRCIPQSQVCNGI 2738
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C N L+C +N CV CDG DC + DE
Sbjct: 2739 NDCKDNVTSDETHERCPR-----NTTCPLNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2793
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2794 PVHCAQRTCPQNSFRCPNHRCIPA 2817
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 130/315 (41%), Gaps = 79/315 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C G+F+C +CIP+S C
Sbjct: 2677 CSPNEFRC-NNGRCIFKTWKCDHENDCRDGSDEEGCVYPPCALGEFTCANYRCIPQSQVC 2735
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2736 NGINDCKDNVTSDETHERCPRNTTCPLNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2790
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2791 DENPVHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2850
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C ++
Sbjct: 2851 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-ERHQCNDRKCDEETEFTCTANKMWNR 2903
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF-CPAGQNPN 409
QC+ CDG PDC +G D EN+ H +PTP G F C G+ N
Sbjct: 2904 AQCIPKKWLCDGDPDCVDGAD-----------ENVTLHHCPAPTPCGDNQFTCNNGRCLN 2952
Query: 410 KTQCVDADECLIDGS 424
++ D D DGS
Sbjct: 2953 RSWLCDHDNDCGDGS 2967
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 114/307 (37%), Gaps = 38/307 (12%)
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
IF D L+ A + G NR +V P I D +YW D +L +
Sbjct: 3322 RIFWADAHLDYIAFADLEGHNRR-IVLSGTSVPHVFAITVFDDFIYWTDWNLKAISRAEK 3380
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMG 215
+ R + L + P N C + G G
Sbjct: 3381 FSGAKLKMLRNTTHRPYDIHAYHPLRQLPYNNPCAENNGGCSHLCLIAPPASSYLLEGYG 3440
Query: 216 KCIPESWKCD--GFVDCLEDGSDEPNTCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCS 272
+ S+KC+ +DG TCI C GQ +C +KCIP W CD E DC
Sbjct: 3441 QPGVTSYKCECPNQFSLDKDGK----TCIANCTAGQHRCGPPDEKCIPWYWRCDGEKDCK 3496
Query: 273 TDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE C QCA + C P +CD DC D +DE
Sbjct: 3497 -----DGSDESSSCPPRNCGPSVFQCA-NGNCTPTVTICDGSDDCG-----DKSDE---- 3541
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA-------DCE 383
+ A+ C E +C S+ +C+ S CDG DC +G DE P C+N+ C+
Sbjct: 3542 --AKCALECGELEFKCKSNGRCIHDSWKCDGDADCKDGSDEDPVICHNRTCDPSTEFSCK 3599
Query: 384 NLKCSHK 390
N KC K
Sbjct: 3600 NGKCIPK 3606
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 144 CDSHLNTVESVRVDGSHNAV---LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 200
CD +L+ +G N + C ++ RC ++ +C+ S C+ + DC + DE
Sbjct: 81 CDGYLDCRNGRDEEGCGNNMSKPACRLDQFRCNTTQRCIDQSARCNHRDDCGDMSDEEHC 140
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK---- 256
CT QF C CIP +++CDG+ DC D SDE + + C + C
Sbjct: 141 SFPPCTSDQFRCANALCIPIAYQCDGYTDC-HDNSDESSCTMTVCPGNKFMCPKGAPDGK 199
Query: 257 -KCIPHNWLCDEEMDC 271
CI + LCDE+ DC
Sbjct: 200 PMCINRSQLCDEKQDC 215
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++ I PS+L IDY + LYW DS L+T+E++ + G++ V+
Sbjct: 4167 KIEIAWMDGDRRQMLVSERIANPSALTIDYAMEHTLYWSDSKLDTIEAISLTGTNRRVVL 4226
Query: 166 HPNELR 171
L+
Sbjct: 4227 KGRSLK 4232
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ +++ DGS
Sbjct: 1514 RIERIGMDGNNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFIDTCLYDGSKRIQVLA 1573
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1574 SSHYLLHPHSL 1584
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ WD PA + +A G N + WP+ L ID+N+D LYWCD+ L+
Sbjct: 755 FFSEWDRPA--------NISRAHADGSNLVVFQNLTLGWPNGLAIDFNKDRLYWCDALLD 806
Query: 150 TVESVRVDGS 159
V+ +DG+
Sbjct: 807 HVQHSNLDGT 816
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G N SP+VT I P L ID +YW DS L+T++ V G ++
Sbjct: 2153 RIGKAYLDGSNWSPIVTSGISTPRDLTIDPATHDIYWVDSKLDTIQKVSYTGGGREII 2210
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L IDY D ++W D+HL+ + ++G +
Sbjct: 3284 LQAYIGKMGMDGSNFTRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEGHNR 3343
Query: 162 AVL 164
++
Sbjct: 3344 RIV 3346
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 104/271 (38%), Gaps = 55/271 (20%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q C S CIP +W+CD + DC +D+ + L+ +F
Sbjct: 1080 CSYFQFTCPRSGHCIPQSWVCDGDSDC------------FDQQDEMDCPPVTCLSTQFTC 1127
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRSPLVT 123
+Q +C + +C I+D + D + P + P L+K + V+
Sbjct: 1128 ADQKMCVLSS-------YKCDGISDCNDGSDEVGCPSLAPDQCNLDK-------QFQCVS 1173
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSK 183
I P + ++CD + + S + C P RC +++CV +
Sbjct: 1174 SAICIPKN----------WYCDGTADCPDKSDEPESCGKIDCQPGFFRC-QNDKCVFKAY 1222
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCG---------MGKCIPESWKCDGFVDCLEDG 234
CDGK DC +G DE +A C P F C +CIP CDG DC G
Sbjct: 1223 ICDGKDDCGDGSDENTELHA-CGPPPFKCDSQQWRCPNVTNRCIPTVNVCDGKPDCPNGG 1281
Query: 235 SD----EPNTCIHQ---CFNGQVQCALSKKC 258
+ + + C HQ C N Q + +C
Sbjct: 1282 DEGFGCDLSECTHQAGLCTNDCFQTPIGAQC 1312
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ K M G + ++ K++ PS L IDY+ +LYW D+ +E ++G++
Sbjct: 2464 FGTSGKVFKTTMGGSLKRAIIDKDLSQPSGLAIDYDDRMLYWTDAVREKIERSDLEGNNR 2523
Query: 162 AVL 164
+L
Sbjct: 2524 EIL 2526
>gi|195393330|ref|XP_002055307.1| GJ18862 [Drosophila virilis]
gi|194149817|gb|EDW65508.1| GJ18862 [Drosophila virilis]
Length = 4631
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/309 (37%), Positives = 155/309 (50%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1139 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCADLRQCVEESYK 1198
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC Q +C + CIP W CD DCS D+
Sbjct: 1199 CDGIPDC-NDGSDELGCPSMGPNQCNVEKQFRCKSTGLCIPIAWHCDGSNDCS-----DH 1252
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1253 SDEE-----DC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGTEHAC 1300
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G + +CV ++ CD DC NG DEG C+ A+CE+ +CS
Sbjct: 1301 VPPPFKCPHGQWQCPGVTERCVNITSVCDDTIDCPNGADEGEGCD-LAECEHQTGQCSSF 1359
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G P+ CVD +EC G C Q CTNT SY CSCT GY L P
Sbjct: 1360 CQKTPNGALCVCPPGSEIGPDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTPGYVLGP 1419
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1420 NKHTCKAVN 1428
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/342 (33%), Positives = 158/342 (46%), Gaps = 46/342 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAE--CTP 207
C +L CG + C+ + CD DC + DE FCNA P
Sbjct: 72 CESPQLNCGQYVFNKTYCIPQNYRCDMIEDCEDKSDEAQCNYRKCLHTDVFCNAPGGAAP 131
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
+ S G C+ + +CDG++DC G DE C Q +CA +KCI + C+
Sbjct: 132 AEGSRLTGPCVAKEKRCDGYLDC-RTGRDEDGCNGVACRLDQFRCANGQKCIDVSQKCNH 190
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC DN+DE F C + Q +C + CIP+N+ CD DC+ D +DE
Sbjct: 191 RNDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DESDE 239
Query: 328 DWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ A+ C N+ C G N +C+ S+ CDGK DC +G DE C+ A C
Sbjct: 240 -----ANCTAIACPDNKFLCPRGGVNGAPKCILKSQLCDGKRDCEDGSDEETACS-IASC 293
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
L C KC P+ G +C+C GQ+ + CVD DEC G CDQ CTNT SY C C
Sbjct: 294 PALSCEFKCGPSLTGGVCYCRPGQSLAADNRTCVDLDECAEWGHCDQLCTNTPGSYTCQC 353
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+GY L + C A P +IF+ I R++ + S
Sbjct: 354 AQGYRLM-NASKCIA---PDANNLQLIFAHDRAIMRMYAHDS 391
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 149/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2815 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2874
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2875 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2928
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2929 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2981
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2982 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSPLEF 3040
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC ++C + C GQ QC+D
Sbjct: 3041 TCQNFKCIRNQYRCDGEDDCGDHSDEVDCKKENSTCAQGQFACTNGQCIDYSLVCNKVAD 3100
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
DEC + C C +T Y C C EGY L DGK+C V+ +
Sbjct: 3101 CTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 3160
Query: 462 EPAS 465
+P +
Sbjct: 3161 QPGA 3164
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 142/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E+A + G NR LV I +P ++ + +D +YW D L V N V
Sbjct: 2564 VREKIERADLDGRNRELLVAATI-YPFAITV--FRDYIYWTDLQLRGVYRAEKHTGANMV 2620
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R S+ N C + C +GKP+C S +E
Sbjct: 2621 EMVKRLEDSPRDIRIFSADRQKCNVNPCTINNGGCAQSCHPAPNGKPECKCDDNSKVVNE 2680
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++PN C H C + +C
Sbjct: 2681 GRMCAPRNNTCEASKFYCQNGKCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2740
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 2741 -NGRCIFKSWKCDHENDCK-----DGSDELGCSYPPCVDGEFTCA-NGRCIPQAQVCNGV 2793
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C PN L+C +N CV CDG DC + DE
Sbjct: 2794 NDCKDNATSDETHERCPM-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2848
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2849 PLHCGQRTCPTNSFRCPNHRCIPA 2872
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S CDG DC + DE C C +F C G+CIP +++CD DC D S
Sbjct: 1031 RCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCKSGRCIPLNFRCDQENDC-GDNS 1089
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE + C Q CA + +CIP W CD E DC D++DE D+ C Q
Sbjct: 1090 DELDCGNVTCATSQFACA-NGRCIPSMWKCDSENDCG-----DSSDEGDFCAEKTCAYFQ 1143
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C + CIP +W+CD + DC D DE + C N+ +C QCV
Sbjct: 1144 FTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK-----DCPPISCLANQFKCADLRQCV 1193
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CDG PDC++G DE
Sbjct: 1194 EESYKCDGIPDCNDGSDE 1211
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 155/373 (41%), Gaps = 83/373 (22%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3739 DFKCGN-NRCIPKQWMCDFADDCGDASDENDAICKGRYRECSESEFRCGNGKCISSRWQC 3797
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 3798 DHEDDC-GDNSDEMSCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVDCPPRF 3855
Query: 272 --------------------------STDDIVDNTDEDWDKFHQCFN----GQVQCALSK 301
TDD D +DED K FN + QCA +
Sbjct: 3856 PGGRFCPESRFQCTNNLCVSLTDLCDGTDDCGDGSDED-PKVCSDFNCDTLRRFQCA-NH 3913
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CV 354
+C+ +CD D+ D +DE+ N LC + C Q C+
Sbjct: 3914 RCVARYQICD-----GIDNCGDGSDEN-------NMTLCASKQKPCDLYTQYQCANKHCI 3961
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QN 407
++ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 3962 ERAQVCDYSDDCGDASDE-LGCHHTSSCSEQSRGGCQHHCHNLTDGGYICTCYPGYIIAP 4020
Query: 408 PNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
NK +C D DEC +C C N + +Y CSC EG+ L DG S V + E +
Sbjct: 4021 DNKKKCADVDECATRQHTCSHQCHNMNGTYSCSCREGFHLS-DGAS--GVCKAEKEDVVL 4077
Query: 467 IFSSTVDIRRIHL 479
+F++ +IR + L
Sbjct: 4078 VFANGPEIRGLDL 4090
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 96/215 (44%), Gaps = 36/215 (16%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
GS +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3537 GSDEKCIPWFWKCDGEKDCKDGSDEPTTCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3595
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-- 289
DGSDE N C C +C S +CI +W CD + DC D +DED H+
Sbjct: 3596 GDGSDEQN-CDLPCPLSDFKCKTSGRCILDSWRCDGDADCK-----DGSDEDPLVCHKRS 3649
Query: 290 --------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C NG +CIP W+CD + DC D++DE N C
Sbjct: 3650 CDPETEFACKNG--------RCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CT 3693
Query: 342 PNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
RC G SN +C+ FCDGK DC + DE P
Sbjct: 3694 TGWQRCPGQSNYRCIPKWLFCDGKDDCRDNSDEMP 3728
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 157 DGSHNAVLCHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
DGS C P R G+ + C + CDG DC +G DE C+ C F C
Sbjct: 3557 DGSDEPTTCAPRHCRAGTFQCKNTNCTPSATICDGVDDCGDGSDE-QNCDLPCPLSDFKC 3615
Query: 213 GM-GKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEM 269
G+CI +SW+CDG DC +DGSDE P C + + + + A + +CIP W+CD +
Sbjct: 3616 KTSGRCILDSWRCDGDADC-KDGSDEDPLVCHKRSCDPETEFACKNGRCIPQLWMCDFDN 3674
Query: 270 DCSTDDIVDNTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D++DE Q C G +C + +CIP CD + DC DN+
Sbjct: 3675 DCG-----DDSDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR-----DNS 3724
Query: 326 DEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE N C + +CG +N+C+ CD DC + DE
Sbjct: 3725 DE-----MPENCPKCSAETDFKCG-NNRCIPKQWMCDFADDCGDASDE 3766
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 2732 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCSYPPCVDGEFTCANGRCIPQAQVC 2790
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2791 NGVNDCKDNATSDETHERCPMNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2845
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2846 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2905
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2906 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2958
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2959 AQCIPKKWICDGDPDCVDGADENTTLHN 2986
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 82/188 (43%), Gaps = 33/188 (17%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCAL----SK 256
NA C P F C GKCI W C+ DC +DG DE +C +C + Q+ C
Sbjct: 29 NAPCPPEMFRCNNGKCITRHWVCNYQKDC-DDGEDEMQSCPPPECESPQLNCGQYVFNKT 87
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC------------ALSKKCI 304
CIP N+ CD DC D +DE + +C + V C L+ C+
Sbjct: 88 YCIPQNYRCDMIEDCE-----DKSDEAQCNYRKCLHTDVFCNAPGGAAPAEGSRLTGPCV 142
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
CD +DC T DED N V C ++ RC + +C+ +S+ C+ +
Sbjct: 143 AKEKRCDGYLDCRT-----GRDED-----GCNGVACRLDQFRCANGQKCIDVSQKCNHRN 192
Query: 365 DCSNGEDE 372
DC + DE
Sbjct: 193 DCGDNSDE 200
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 4227 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 4286
Query: 166 HPNELR 171
++LR
Sbjct: 4287 KGDQLR 4292
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ DG N V C ++ RC + +C+ +S+ C+ + DC + DE
Sbjct: 148 CDGYLDCRTGRDEDGC-NGVACRLDQFRCANGQKCIDVSQKCNHRNDCGDNSDEQGCNFP 206
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + KC
Sbjct: 207 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADESDEANCTAIACPDNKFLCPRGGVNGAPKC 265
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 266 ILKSQLCDGKRDCE-----DGSDEE 285
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C +GQ C S +KCIP W CD E DC D +DE C G QC
Sbjct: 3523 TCIANCTSGQHLCGGSDEKCIPWFWKCDGEKDCK-----DGSDEPTTCAPRHCRAGTFQC 3577
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C +S +C+ S
Sbjct: 3578 K-NTNCTPSATICD-----GVDDCGDGSDE------QNCDLPCPLSDFKCKTSGRCILDS 3625
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P +K C+
Sbjct: 3626 WRCDGDADCKDGSDEDPLVCHKRSCD 3651
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3342 LQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYTDLEGRHR 3401
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
++ N S ALS F D
Sbjct: 3402 HIVLSGN-----SVPHVFALSLFDD 3421
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 747 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 806
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 807 RPRAIVVHPNRGYI--FFSEWDRPA--------NITRANTDGSGLLVFRNVTLGWPNGLS 856
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 857 IDFKEDRVYWCDALLDHVQHANLDGT 882
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N T + N + + +++Q + V + + + + ++ IF
Sbjct: 1420 NKHTCKAVNHTAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1477
Query: 105 DERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K HG ++T + L D+ LYW DS LNT+E +GS+
Sbjct: 1478 DMKLKKISRLDHGMEPQEIITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRL 1537
Query: 163 VLCHPN 168
VL N
Sbjct: 1538 VLVREN 1543
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G PLVT +I P L ID ++W DS L+T++ + +G++ ++
Sbjct: 2209 IGRALLDGTKWQPLVTSDISMPRDLTIDMQTHDVFWVDSKLDTIQKISYNGANRKII 2265
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 27 EEMDCSTDDIVDNTDEDWDKYFKRILNGT-HTLALEFNHRNQSLCFIQQQNVSSVRLRCA 85
+E+ + D+V+ DW L+ +T+ + + + L +++ N++ R C
Sbjct: 1494 QEIITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRLVLVRE-NITQPRGMCI 1552
Query: 86 QINDLLNSWDLPAPE---IFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ 138
P+P+ IF D R+E+ GM G R ++ I WP+ L +D
Sbjct: 1553 D----------PSPDARFIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIAT 1602
Query: 139 DILYWCDSHLNTVESVRVDGS-------HNAVLCHPNEL 170
+Y+ DS L+ ++ +G+ + L HP+ L
Sbjct: 1603 KRVYFADSKLDFIDFCYYNGTGRQQVLASSHYLLHPHSL 1641
>gi|47219712|emb|CAG12634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3848
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 157/325 (48%), Gaps = 44/325 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C PN C ++C+ S CDG DC +G DE C C +F+C G +C+ S++
Sbjct: 967 CPPNYFLC-PDHRCIYNSYVCDGDQDCLDGSDEKD-CEFACASYEFACASGDQCVSSSYR 1024
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP W CD DC D +
Sbjct: 1025 CDGVFDC-RDHSDEQDCPTRGPGLCHDDEFQCQNDGFCIPGVWECDGHSDCE-----DGS 1078
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE ++QC N K CIP +W CD + DC +D +DE +
Sbjct: 1079 DEHNSCPPVTCRPNYYQCQN--------KLCIPTSWQCDGDNDC-----LDMSDE---QN 1122
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
C + +C + C+ L K CDG+ DC NG DE P CN + DC N CS
Sbjct: 1123 CPTPPFRCPSGQWQCPTDQLCIDLDKVCDGQSDCPNGADESPICN-QDDCILNNGGCSDI 1181
Query: 391 CSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C+ P GA C CP+G N +KT C D +ECLI G C Q C N S+ C C+EGY L
Sbjct: 1182 CTQGPFGAQCSCPSGFQLLNDSKT-CEDINECLIPGFCSQECYNERGSFRCYCSEGYLLE 1240
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTV 472
PDG++C A++ QD I S +
Sbjct: 1241 PDGRTCKAIDT-QDAVLLIAKRSQI 1264
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 147/466 (31%), Positives = 197/466 (42%), Gaps = 61/466 (13%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H+C Q QC +KKCIP +W CD DCS DN+DED +
Sbjct: 3346 HRCQENQFQCK-NKKCIPVSWHCDGVKDCS-----DNSDEDPET---------------- 3383
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW--DLPAPEIFPLDERLEKAGMHGENRSP 120
Q+ + + +CA L +S+ D DE LE ++R
Sbjct: 3384 ---------CSQKTCAPGQFQCANGRCLPSSYVCDFQNDCGDNSDEPLETCS---KSRHV 3431
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVA 180
VT+ I + L + + S V + C E C ++ +C+
Sbjct: 3432 SVTQTWSLQKRKEITFFNIFLIMMLTFVMHFLSCPVGPDYK---CDETEFSCKTNYRCIP 3488
Query: 181 LSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
CDG DC + DE + C P G F C +CIP W+CDG DC DGSDE N
Sbjct: 3489 QWARCDGTNDCLDNSDEEGCEDVTCDPLGDFRCDNHRCIPIRWQCDGNNDC-GDGSDERN 3547
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC-FNGQVQC 297
C + +C S++CIP W+CD DC DN+DE D C + +C
Sbjct: 3548 CQPRPCSESEFRCD-SQQCIPATWVCDHMNDCG-----DNSDERDCAATITCEMPSKFRC 3601
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
A + CI LC+++ DC D +DE D C +E +C S+ CV L
Sbjct: 3602 A-NGYCIFAGLLCNQKDDCG-----DGSDETEDLCREPTLPPCTLDEFKC-SNGHCVPLP 3654
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPN---KTQ 412
CD +C + DE G N +CE C H C+ G +C C G N T
Sbjct: 3655 YVCDHNDNCGDLTDELGCNFGNDRNCEEKLCQHVCTNLNGTGFICSCKPGYKVNPDSTTT 3714
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C+D DEC I G+C Q C NT SY C C GY DGK C A +V
Sbjct: 3715 CLDIDECQIYGTCPQFCKNTKGSYDCECAPGYRKVGDGKMCEAEDV 3760
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 114/390 (29%), Positives = 156/390 (40%), Gaps = 66/390 (16%)
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
+IL + D +LN S C NE RC S +C+ S CDG DC +G DE
Sbjct: 2602 NILCFTDKYLNLCSS-------ETRTCSMNEFRC-DSGKCIPNSWVCDGIRDCQDGTDEP 2653
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQ 251
C C QF+C G CIP+ CDG DC D SDE TC F
Sbjct: 2654 LSCGKSCAFVQFTCTNGNCIPQFMLCDGNNDCW-DNSDEAVELDCGERTCSSVQFTCPTW 2712
Query: 252 CALSKKCIPHNWLCDEEMDCS-----------------------------------TDDI 276
KC+P +++CD E DC+ +D
Sbjct: 2713 IPGFPKCLPISYVCDGERDCANAADELRNCPNRTCHLDEFSCSNGLCILLPFHCDRVNDC 2772
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + C + Q C + CI + CD DC +D +DE+ D
Sbjct: 2773 GDGSDELGCTYDTCSSNQFTCT-NGACISSAFTCDGMSDC-----LDGSDEE-DSLCVSP 2825
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTP 395
C P + C +S QC+ ++ CDG+ DC + DE G N + KC+ C+ T
Sbjct: 2826 QPTCAPQQYMC-TSGQCIDTNRVCDGQKDCPDNSDEKGCGINECTNPSVHKCAQLCTDTL 2884
Query: 396 RGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G C C G P+ C D +EC C Q C N SY C C GY DG++
Sbjct: 2885 TGYYCSCQPGYRLMPDGKACEDINECSSTPAVCSQICENVVGSYYCKCAPGYIREADGRT 2944
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C +++S+ IR + +GS
Sbjct: 2945 CRQ---NSGIAPYLLYSNRYYIRNLTTDGS 2971
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/339 (30%), Positives = 142/339 (41%), Gaps = 92/339 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ +AGM G N S ++T ++WPS+L IDY
Sbjct: 3100 IGRAGMDGRNVSAIITTKLEWPSALTIDYTTNRIFFADSHLNFLDFADMDGQNRHRAVGG 3159
Query: 138 -----------QDILYWCDSHLNTVESV-RVDGSHNAVL------------CHPNELRCG 173
+D +YW D + +TVE + G V+ HP +
Sbjct: 3160 TLPHVFAVSLFEDWVYWTDWNTHTVEKAHKYTGEMRTVMGNNTHRPYDIHVYHPYR-QPR 3218
Query: 174 SSNQC----VALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCGMG-K 216
S N C + S C P E P C A+C+ QF CG K
Sbjct: 3219 SENPCSSHHLTCSHLCLIGPGGQQASCECPDHFIGLAVGFKIQCVADCSSTQFRCGDNEK 3278
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP W+CDG DC DGSDEP TC C GQ QC + C ++CD DC
Sbjct: 3279 CIPIWWECDGQSDC-GDGSDEPQTCPPRYCPVGQFQCQ-DRNCTHSGFICDGHADCP--- 3333
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D++DED H+C Q QC +KKCIP +W CD DCS DN+DED +
Sbjct: 3334 --DHSDEDAALCSDHRCQENQFQCK-NKKCIPVSWHCDGVKDCS-----DNSDEDPE--- 3382
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C P + +C ++ +C+ S CD + DC + DE
Sbjct: 3383 TCSQKTCAPGQFQC-ANGRCLPSSYVCDFQNDCGDNSDE 3420
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 56/308 (18%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVL 164
+++E+A + GENR ++ + +P ++ + + QDI +W D V R DG S AVL
Sbjct: 2299 DKIERATLTGENRH-IILHGVVYPYAMTV-FQQDI-FWTDWTERAVFRARKDGGSGFAVL 2355
Query: 165 CH-----PNELRCGS-------SNQCVALSKFCD-------GKPDC-----------SNG 194
PN++ + S+ C + C P+C ++G
Sbjct: 2356 AQDLQYRPNDIHVYAGSKQEMCSSSCQQFNGGCSHICVSGPSGPECQCPHDGSWYLANDG 2415
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
+D C QF+C G CI SWKCDG+ DC ++ + C H C + C
Sbjct: 2416 KDCIQDTGKRCQADQFTCLNGHCISVSWKCDGYNDCQDNSDELERVCAFHTCSATEFVCD 2475
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +C+P +++CD DC DN+DE F C + +CI +++CD
Sbjct: 2476 -NGRCVPLSYVCDYTNDCR-----DNSDERGCPFPTCNPTTEFTCDNGRCISADFICDGH 2529
Query: 314 MDC---STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
DC +T D ++ D C ++C +N C+ CDG +C +
Sbjct: 2530 NDCRDNATSDEINCPDR-----------TCPDGLVKCDHTNICIYPGNLCDGYNNCGDNS 2578
Query: 371 DEGP-FCN 377
DE P FC
Sbjct: 2579 DENPLFCG 2586
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 20/182 (10%)
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+C+P ++ CD DC +DN+DE+ Y P R ++ C S+ C+
Sbjct: 38 QCVPASYRCDHVKDC-----LDNSDENNCNY--------PPCTERTCANGACYNNSQHCN 84
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADEC 419
G DC +G DE F + C L C + C P+P+G C+CP G + CVD D+C
Sbjct: 85 GLQDCRDGSDE--FNCSLQRCATLSCEYMCHPSPQGGACYCPDGFTVANDSRSCVDYDDC 142
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
I G CD C + S+ CSC +GY L G C A NV P +IF++ D+ +
Sbjct: 143 QIWGICDHLCEDRPGSHQCSCADGYFLE-QGHICKA-NVSGGLP-QLIFTNGGDVMMADI 199
Query: 480 NG 481
+G
Sbjct: 200 HG 201
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 92/224 (41%), Gaps = 37/224 (16%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
SH P +CG C K D K DC +D P + C F C G+C
Sbjct: 802 SHFCFPVPPFSRKCG----CPYGMKLQDNKRDCIK-DDSVPPPDNNCGDNAFECDEGRCR 856
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCS 272
P S++CDG +DC+ D SDE N C + C+ +K CI W CD DC
Sbjct: 857 PNSYRCDGIIDCV-DKSDEAN-----CTDTGATCSPLAFTCDNKHCILSGWRCDGLDDCG 910
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D D + C C + +CI ++LCD + DC D +DE
Sbjct: 911 --DGSDEMNCPTKTPTTCSADYFTCD-NYRCISKSFLCDGDNDCG-----DGSDE----- 957
Query: 333 FSHN----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
HN C PN C ++C+ S CDG DC +G DE
Sbjct: 958 --HNCNSTITTCPPNYFLC-PDHRCIYNSYVCDGDQDCLDGSDE 998
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 127/350 (36%), Gaps = 48/350 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G N PLV + WP L +DY D LYW DS L+ V + + GS +
Sbjct: 671 IMRAFTDGSNAIPLVNTTLGWPYGLALDYITDRLYWVDSQLDQVGHIDIQGSDRQTFTNI 730
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
E+ Q +L+ + D G S + + I +
Sbjct: 731 GEI-----TQPYSLTVYTDYLYVADTRTRS--IYEMRKRDGGGSVVVRRGITAIMNIKAY 783
Query: 228 V----DCLEDGSDEPNTCIHQCFNGQVQCALSKKC-IPHNW-LCDEEMDCSTDDIVDNTD 281
C+ C H CF S+KC P+ L D + DC DD V D
Sbjct: 784 TPELHSCIRCTKPPNGQCSHFCFPVP---PFSRKCGCPYGMKLQDNKRDCIKDDSVPPPD 840
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ C + +C +C P+++ CD +DC VD +DE + C
Sbjct: 841 NN------CGDNAFECD-EGRCRPNSYRCDGIIDC-----VDKSDE---ANCTDTGATCS 885
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
P C + C+ CDG DC +G DE + C K T
Sbjct: 886 PLAFTC-DNKHCILSGWRCDGLDDCGDGSDE------------MNCPTKTPTTCSADYFT 932
Query: 402 CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
C + +K+ D D DGS + C +T + +C Y L PD +
Sbjct: 933 CDNYRCISKSFLCDGDNDCGDGSDEHNCNST----ITTCPPNYFLCPDHR 978
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 112/301 (37%), Gaps = 67/301 (22%)
Query: 95 DLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D IF D L + A M G+NR V + P + +D +YW D + +TV
Sbjct: 3127 DYTTNRIFFADSHLNFLDFADMDGQNRHRAVGGTL--PHVFAVSLFEDWVYWTDWNTHTV 3184
Query: 152 ESV-RVDGSHNAVL------------CHPNELRCGSSNQC----VALSKFCDGKPDCSNG 194
E + G V+ HP + S N C + S C P
Sbjct: 3185 EKAHKYTGEMRTVMGNNTHRPYDIHVYHPYR-QPRSENPCSSHHLTCSHLCLIGPG---- 3239
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL 254
G + EC +G I C+ C + Q +C
Sbjct: 3240 ---GQQASCECPDHFIGLAVGFKI---------------------QCVADCSSTQFRCGD 3275
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEE 313
++KCIP W CD + DC D +DE C GQ QC + C ++CD
Sbjct: 3276 NEKCIPIWWECDGQSDCG-----DGSDEPQTCPPRYCPVGQFQCQ-DRNCTHSGFICDGH 3329
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D++DED H C N+ +C + +C+ +S CDG DCS+ DE
Sbjct: 3330 ADCP-----DHSDEDAALCSDHR---CQENQFQC-KNKKCIPVSWHCDGVKDCSDNSDED 3380
Query: 374 P 374
P
Sbjct: 3381 P 3381
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSS 131
+ +NV+S R + D N +L + + R+E+A M G R +V+ + WP+
Sbjct: 1363 LLSKNVTSPR---GLVLDPRNHTNLMFWSDWGQNPRIERAFMDGTVRQVIVSTKLYWPNG 1419
Query: 132 LVIDYNQDILYWCDSHLNTVESVRVDGSH-------NAVLCHPNEL 170
L +DY +Y+ D++L ++ DGS+ N VL HP+ +
Sbjct: 1420 LALDYTTHRIYFADAYLKYIDYCSYDGSNRHQVMASNMVLQHPHGM 1465
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G NR+ L ++++ P L +DY D LYW D L+ + + DGS ++
Sbjct: 2025 KIERALLDGTNRTVLASESLASPRGLTVDYTNDFLYWTDDVLDMISRMASDGSQRQII 2082
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+LE+A M G NR LV K + P+++ +D +YW D H +TVE+V G ++
Sbjct: 355 KLERAFMDGSNRVELVKKRLGIPAAITVDIVTKRVYWTDIHFDTVETVTYSGLDRKIV 412
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 54/275 (19%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH----PNEL-------------- 170
P+ L IDY + +LYW D+ L+ +E + G + ++ H P +
Sbjct: 2279 PNGLSIDYEERMLYWADASLDKIERATLTGENRHIILHGVVYPYAMTVFQQDIFWTDWTE 2338
Query: 171 ------RCGSSNQCVALSKFCDGKPDCSN--GEDEGPFCNAECTPGQFSCGMGK-CI--P 219
R + L++ +P+ + + C++ C QF+ G C+ P
Sbjct: 2339 RAVFRARKDGGSGFAVLAQDLQYRPNDIHVYAGSKQEMCSSSCQ--QFNGGCSHICVSGP 2396
Query: 220 ESWKC----DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+C DG DG D +C Q C L+ CI +W CD DC
Sbjct: 2397 SGPECQCPHDGSWYLANDGKDCIQDTGKRCQADQFTC-LNGHCISVSWKCDGYNDCQ--- 2452
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DE FH C + C + +C+P +++CD DC DN+DE +
Sbjct: 2453 --DNSDELERVCAFHTCSATEFVCD-NGRCVPLSYVCDYTNDCR-----DNSDERGCPFP 2504
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+ C+P + +C++ CDG DC +
Sbjct: 2505 T-----CNPTTEFTCDNGRCISADFICDGHNDCRD 2534
>gi|195446934|ref|XP_002070989.1| GK25553 [Drosophila willistoni]
gi|194167074|gb|EDW81975.1| GK25553 [Drosophila willistoni]
Length = 4521
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/309 (37%), Positives = 154/309 (49%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C M +C+ ES+K
Sbjct: 1026 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCSDMRQCVEESYK 1085
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 1086 CDGIPDC-NDGSDELGCPSMGPNQCNIEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 1139
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1140 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGTEHAC 1187
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
C + +C G + +CV ++ CD PDC NG DEG C+ A+C + +CS+
Sbjct: 1188 VPPPFKCAHGQWQCPGVTERCVNITSVCDDTPDCPNGADEGEGCD-LAECVHQTGQCSNF 1246
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + CVD +EC G C Q CTNT SY CSCT+GY L P
Sbjct: 1247 CQKTPNGALCVCPPGSEIGEDGFTCVDTNECDPPGLCSQQCTNTKGSYFCSCTDGYILEP 1306
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1307 NKHTCKAVN 1315
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/292 (37%), Positives = 143/292 (48%), Gaps = 31/292 (10%)
Query: 200 FCNAE--CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
FCNA P + S G C+P+ +CDG+VDC G DE C Q +CA K
Sbjct: 14 FCNAPGGAAPAEGSRLAGPCVPKEKRCDGYVDC-RTGRDEEGCNGVACQLDQFRCASGHK 72
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CI C+ DC DN+DE F C + Q +C + CIP+N+ CD DC+
Sbjct: 73 CIDAALKCNHRDDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA 126
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDCSNGEDE 372
D +DE + A+ C N+ C G N +C+ SK CDGK DC +G DE
Sbjct: 127 -----DESDE-----ANCTAIACPDNKFLCPRGGVNGAPKCIFKSKLCDGKRDCEDGSDE 176
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCT 430
C+ A C L C +KC P+ G +C+C GQ+ P+ C D DEC G CDQ CT
Sbjct: 177 ETNCS-IASCPALSCEYKCGPSLTGGVCYCRPGQSLAPDNRTCADLDECAEWGHCDQLCT 235
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
NT SY C C +GYTL + K C A P +IF+ I R+ +G
Sbjct: 236 NTLGSYSCQCAQGYTLINESK-CIA---PDANNLQLIFAHDRAIMRMKAHGG 283
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 152/364 (41%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2705 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2764
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2765 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2818
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2819 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2871
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ + C RCG+ +C+ CD DC +G DEG FCN K
Sbjct: 2872 ATLHNCATPLPCGEEMYRCGNG-RCINKGWLCDHDNDCGDGTDEGKFCNTKYKACSNQEF 2930
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC ++C + CP GQ QC+D
Sbjct: 2931 TCQNFKCIRNQYRCDGEDDCGDHSDEVDCKKDNTTCPQGQFACTNGQCIDYSLVCNKIPD 2990
Query: 416 -ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ADE C +D C C +T SY C C EGY L DGK+C V+ +
Sbjct: 2991 CADESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLE 3050
Query: 462 EPAS 465
+P +
Sbjct: 3051 QPGA 3054
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 155/346 (44%), Gaps = 55/346 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2790 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2845
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG------QVQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE N +H C +C + +CI WLC
Sbjct: 2846 WQRAQCIPKKWICDGDPDCV-DGADE-NATLHNCATPLPCGEEMYRCG-NGRCINKGWLC 2902
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C N + C + KCI + + CD E DC
Sbjct: 2903 DHDNDCG-----DGTDEGKFCNTKYKACSNQEFTCQ-NFKCIRNQYRCDGEDDCG----- 2951
Query: 323 DNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-- 379
D++DE D K + C + C ++ QC+ S C+ PDC++ DE CN
Sbjct: 2952 DHSDEVDCKK----DNTTCPQGQFAC-TNGQCIDYSLVCNKIPDCADESDEPAHCNVDEC 3006
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSY 436
A E +C HKC T C C G + C D DECL G+C Q C+NT S+
Sbjct: 3007 AKVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGSF 3066
Query: 437 VCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + + P +IF++ +R + ++G
Sbjct: 3067 YCKCDENYYERQNDEHTCKRKD---NIPPWLIFTNKYYVRNMSVDG 3109
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 111/372 (29%), Positives = 155/372 (41%), Gaps = 81/372 (21%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3630 DFKCGN-NRCIPKQWMCDFADDCGDASDENDAICKGRYRECSESEFKCGNGKCISSRWQC 3688
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE N +QC NG QCA S CI + CD + DC
Sbjct: 3689 DHEDDC-GDNSDEMNCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVGCPPRF 3746
Query: 272 --------------------------STDDIVDNTDEDW---DKFHQCFNGQVQCALSKK 302
TDD D +DED F+ + QCA + +
Sbjct: 3747 PGGRYCPESRYQCTNNLCVSLSDLCDGTDDCGDGSDEDPSVCSDFNCDTLRRFQCA-NHR 3805
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CVA 355
C+ +CD D+ D +DE+ N LC + C Q CV
Sbjct: 3806 CVARYQICD-----GVDNCGDGSDEN-------NMTLCATKQKPCDMYTQHPCANKKCVE 3853
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QNP 408
S+ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 3854 RSQVCDFSDDCGDASDE-LGCHHTSSCSEQNRGGCQHHCHNLTEGGYICTCYPGYIIAAD 3912
Query: 409 NKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
NK +CVD DEC +C C N + +Y CSC EG+ L DG S V + + ++
Sbjct: 3913 NKKKCVDVDECATRQHTCSHQCHNMNGTYSCSCREGFRLS-DGAS--GVCKAEKDDVILV 3969
Query: 468 FSSTVDIRRIHL 479
+++ +IR + L
Sbjct: 3970 YANGPEIRGLDL 3981
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV I +P ++ + +D +YW D L V N V
Sbjct: 2454 VREKIERSDLDGRNRELLVAATI-YPFAITV--FRDYIYWTDLQLRGVYRAEKHTGANMV 2510
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R S+ N C + C +GK +C S +E
Sbjct: 2511 EMVKRLEDSPRDIRIYSADRQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDDNSKVVNE 2570
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++PN C H C + +C
Sbjct: 2571 GRMCAPRNNTCESSKFYCQNGKCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2630
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ C + +CIP +C+
Sbjct: 2631 -NGRCIFKSWKCDHENDCK-----DGSDEVGCSYPPCVDGEFTCG-NGRCIPQTQVCNGV 2683
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC DN D + C N L+C +N CV CDG DC + DE
Sbjct: 2684 NDCK-----DNATSDETRERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2738
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2739 PLHCGQRTCPTNSFRCPNHRCIPA 2762
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 93/194 (47%), Gaps = 38/194 (19%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP+SW CDG DCL++ +E N C + + QC S +CIP N+ CD+E
Sbjct: 912 FTCNNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCK-SGRCIPLNFRCDQEN 970
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD------- 320
DC DN+DE C Q CA + +CIP+ W CD E DC S+D+
Sbjct: 971 DCG-----DNSDELDCGNVTCGTSQFACA-NGRCIPNMWKCDSENDCGDSSDEGEFCAEK 1024
Query: 321 --------------------IVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSK 358
+ D D+ +DK + + C N+ +C QCV S
Sbjct: 1025 TCAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLANQFKCSDMRQCVEESY 1084
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC++G DE
Sbjct: 1085 KCDGIPDCNDGSDE 1098
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 112/232 (48%), Gaps = 27/232 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTP-GQFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P CN C P +F+C G+CIP+
Sbjct: 3499 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCNKRSCDPHTEFACKNGRCIPQL 3558
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 3559 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 3612
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DN+DE + +C + + +CIP W+CD DC D +DE+ D
Sbjct: 3613 DNSDELPENCPKCSSDTDFKCGNNRCIPKQWMCDFADDCG-----DASDEN-DAICKGRY 3666
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
C +E +CG+ +C++ CD + DC + DE +CE +C +
Sbjct: 3667 RECSESEFKCGNG-KCISSRWQCDHEDDCGDNSDE-------MNCEGYQCKN 3710
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 93/207 (44%), Gaps = 20/207 (9%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
GS +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3428 GSDEKCIPWFWKCDGEKDCKDGSDEPTTCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3486
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQ 289
DGSDE N C C +C S +CI +W CD + DC D +DED
Sbjct: 3487 GDGSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCNKRS 3540
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
C + +CIP W+CD + DC D++DE N C RC G
Sbjct: 3541 CDPHTEFACKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 3592
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEGP 374
SN +C+ FCDGK DC + DE P
Sbjct: 3593 QSNYRCIPKWLFCDGKDDCRDNSDELP 3619
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+CG G+CIP++ C
Sbjct: 2622 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDEVGCSYPPCVDGEFTCGNGRCIPQTQVC 2680
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE C ++C + C+ WLCD + DC DN+
Sbjct: 2681 NGVNDCKDNATSDETRERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2735
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2736 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2795
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2796 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2848
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2849 AQCIPKKWICDGDPDCVDGADENATLHN 2876
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 129/337 (38%), Gaps = 64/337 (18%)
Query: 93 SWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D I+ D L+ A + G +R ++T N Q P + D +YW D +L
Sbjct: 3264 SIDYFTDRIYWADAHLDYVAYADLEGRHRHKVLTGN-QVPHVFALSLFDDYVYWSDWNLK 3322
Query: 150 T-VESVRVDGSHNAVL---------CHPNE-LR-------CGSSNQCVALSKFCDGKPDC 191
V + + G++ VL H N LR CG++N + P+
Sbjct: 3323 AIVRANKFTGANYTVLRNTTHRPYDLHINHPLRQLPYTNPCGTNNGGCSHLCLIAPPPES 3382
Query: 192 SNGEDEGPF-----------------------CNAECTPGQFSCGMG--KCIPESWKCDG 226
+ EG C A CT GQ CG KCIP WKCDG
Sbjct: 3383 TYLNIEGYIEEGAPIFKCACPNQFHLAGDSKTCIANCTAGQHLCGGSDEKCIPWFWKCDG 3442
Query: 227 FVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC +DGSDEP TC C G QC + C P +CD DC N D
Sbjct: 3443 EKDC-KDGSDEPTTCAPRHCRAGTFQCK-NTNCTPSATICDGVDDCGDGSDEQNCD---- 3496
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
C +C S +CI +W CD + DC D +DED N C P+
Sbjct: 3497 --LPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDED---PAVCNKRSCDPHTE 3546
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ +C+ CD DC + DE + + +C
Sbjct: 3547 FACKNGRCIPQLWMCDFDNDCGDDSDEPAYMCRQRNC 3583
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY QD I+YW D+ LN +ES+R DGS +
Sbjct: 4118 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYAQDHIIYWVDTKLNAIESMRADGSRRKAII 4177
Query: 166 HPNELR 171
++LR
Sbjct: 4178 KGDQLR 4183
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 52/297 (17%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA 162
L + ++ A + G + + ++ ++ P S+VI + D +Y D L+ + + ++ G
Sbjct: 761 LLDHVQHASLDGTDIKTVNSRLVRHPFSIVI--HNDWMYITDWRLDAIIRLHKLTGEQEE 818
Query: 163 VLC---HPNEL-----------RCGSSNQC----VALSKFCDGKPDCSNGEDEGPFCNAE 204
++ N L R + C K C P SN P A
Sbjct: 819 MMVREPQTNRLYGVKVYSHEVQRIAETQPCHMNNGGCQKICFAVPIASN-TTTIPRLQAR 877
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C SC G+ + E + C+ D S EP + C N +++CIP +W+
Sbjct: 878 C-----SCPYGERLAEDQ-----MSCVPDPSAEPP--VQPCPNSWDFTCNNQRCIPKSWV 925
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD + DC +DN+DE+ + C + + QC S +CIP N+ CD+E DC D
Sbjct: 926 CDGDDDC-----LDNSDEEQNCTKPTCGSNEFQCK-SGRCIPLNFRCDQENDCG-----D 974
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
N+DE V C ++ C ++ +C+ CD + DC + DEG FC K
Sbjct: 975 NSDE-----LDCGNVTCGTSQFAC-ANGRCIPNMWKCDSENDCGDSSDEGEFCAEKT 1025
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 11/128 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N V C ++ RC S ++C+ + C+ + DC + DE C QF C CIP
Sbjct: 56 NGVACQLDQFRCASGHKCIDAALKCNHRDDCGDNSDEQGCNFPPCHHAQFRCTNALCIPY 115
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDD 275
++ CDG+ DC D SDE N C + + C + KCI + LCD + DC
Sbjct: 116 NFHCDGYHDC-ADESDEANCTAIACPDNKFLCPRGGVNGAPKCIFKSKLCDGKRDCE--- 171
Query: 276 IVDNTDED 283
D +DE+
Sbjct: 172 --DGSDEE 177
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 14/152 (9%)
Query: 33 TDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLN 92
TD VD+T + + + +G +A+++ R +N+ L + L +
Sbjct: 3150 TDPQVDDTPPEREAIIRHDSHGLEGIAIDWVGRKLYWLDRHSKNLDVSELDGTKRKTLRS 3209
Query: 93 SW-DLPAPEIFP-----------LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQ 138
D A + P L + K GM G N + ++ N I WP++L IDY
Sbjct: 3210 GVVDPRAIVVHPGIGYLYFTSWHLQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFT 3269
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
D +YW D+HL+ V ++G H + N++
Sbjct: 3270 DRIYWADAHLDYVAYADLEGRHRHKVLTGNQV 3301
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G+ +PLVT I P L ID +YW DS L+T++ + +G + V+
Sbjct: 2095 RIGKALLDGDKWTPLVTSGISLPRDLTIDMQTHDVYWVDSKLDTIQKISYNGVNRKVI 2152
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 638 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 697
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G N + WP+ L
Sbjct: 698 RPRAIVVHPNRGYI--FFSEWDRPA--------NITRANTDGSNLLVFRNVTLGWPNGLS 747
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 748 IDFKEDRVYWCDALLDHVQHASLDGT 773
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 32/274 (11%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K++ PS L IDY++ LYW D+ +E +DG +
Sbjct: 2409 FGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLDGRN- 2467
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
EL ++ A++ F D ++ + G + AE G M K + +S
Sbjct: 2468 ------RELLVAATIYPFAITVFRD-YIYWTDLQLRGVY-RAEKHTGANMVEMVKRLEDS 2519
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---IVD 278
+ D +D ++ C CA S P+ + +C DD +V+
Sbjct: 2520 PR-----DIRIYSADRQKCNVNPCRINNGGCAQSCHPAPNG-----KAECKCDDNSKVVN 2569
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ + C + + C + KCI W + D ++ Y S
Sbjct: 2570 EGRMCAPRNNTCESSKFYCQ-NGKCISRMW---SCDGDDDCGDNSDEDPNYCAYHS---- 2621
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C PNE RC ++ +C+ S CD + DC +G DE
Sbjct: 2622 -CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDE 2653
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1458 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1517
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1518 RSHYLLHPHSL 1528
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N T + N + + +++Q + V + + + + ++ IF
Sbjct: 1307 NKHTCKAVNHTAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1364
Query: 105 DERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K P ++T + L D+ LYW DS LNT+E +GS+
Sbjct: 1365 DMKLKKISRLDRGMEPQEIITTGLDLVEGLAYDWIAQNLYWLDSKLNTIEVSAENGSNRL 1424
Query: 163 VLCHPN 168
VL N
Sbjct: 1425 VLVREN 1430
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 102/272 (37%), Gaps = 52/272 (19%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q C + CIP +W+CD + DC +DK ++ LA +F
Sbjct: 1026 CAYFQFTCPRTGHCIPQSWVCDGDDDC------------FDKQDEKDCPPISCLANQFKC 1073
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRSPLVT 123
+ C + +C I D + D L P + P +EK H +S
Sbjct: 1074 SDMRQCVEES-------YKCDGIPDCNDGSDELGCPSMGPNQCNIEK---HFRCKSTGFC 1123
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSK 183
I W D C H + + + C N +C ++N CV +
Sbjct: 1124 IPIAWHCDGSND--------CSDHSDEQDC-------GQITCAQNFFKCNNTN-CVFKAY 1167
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG---------KCIPESWKCDGFVDCLEDG 234
CDGK DC + DEG C P F C G +C+ + CD DC +G
Sbjct: 1168 ICDGKDDCGDNSDEG--TEHACVPPPFKCAHGQWQCPGVTERCVNITSVCDDTPDC-PNG 1224
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC 265
+DE C + +C + QC+ + P+ LC
Sbjct: 1225 ADEGEGCDLAECVHQTGQCSNFCQKTPNGALC 1256
>gi|359320553|ref|XP_538245.4| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Canis lupus familiaris]
Length = 4544
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 157/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDSLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ L K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPLDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESVTAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CT-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERACHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSSTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C + C L C H C PT G C+C
Sbjct: 82 TELCVLMSRLCNGVQDCVDGSDEGPHCRELQGQCSQLGCQHHCVPTLNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 153/371 (41%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTPHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 3326 DGRTCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 3384
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 3385 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 3440
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 3441 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 3489
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3490 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1007
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1008 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1063
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C + C+ L CDG DC + DE CE + +H C P
Sbjct: 1064 NDEFQCRLDSLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 1106
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEVPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGAGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGAGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVLMSRLCNGVQDCVDGSDEGPHC 108
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEVPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIP 260
S C+G DC+ DGSDE C GQ Q C+P
Sbjct: 87 LMSRLCNGVQDCV-DGSDEGPHCRE--LQGQCSQLGCQHHCVP 126
>gi|301761302|ref|XP_002916050.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1-like [Ailuropoda melanoleuca]
Length = 4552
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 157/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDSLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ L K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPLDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/344 (33%), Positives = 165/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESITAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CT-----DGSDESTECEYPTCGPNEFRCANGRCLSSRQWACDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C +E +C +S+Q CVA + CDG+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSSEHKCNASSQFLCSSGRCVAEALLCDGQDDCGDGSDERGCHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCVNTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 24 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 78
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC++G DEGP C + C L C H C PT G C+C
Sbjct: 79 HNCLGTELCVLMSRLCNGVQDCADGSDEGPHCRELQGPCSQLGCQHHCVPTLNGPTCYCN 138
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 139 NSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 197
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 198 DRPPVLLIANSQNILATYLSGA 219
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 153/374 (40%), Gaps = 88/374 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C G C L + +C +N LC + D DD DN+DE+ ++ +C PN
Sbjct: 3646 ----ACGTGVRTCPLDEFQC--NNTLCKPKCD-GEDDCGDNSDENPEECAR---FVCPPN 3695
Query: 344 E-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLKC---- 387
RC + C+ + + CDG +C +G DE P C +K + C N +C
Sbjct: 3696 RPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDWEPPTAQTPHCKDKKEFLCRNQRCLSSS 3755
Query: 388 ------------------------------------SHKCSPTPRGAMCFCPAGQN---- 407
+C T + A C P
Sbjct: 3756 LRCNMLDDCGDGSDEEECSIDPKLTSCATNASICGDEARCVRTEKAAYCAPPCRSGFHIV 3815
Query: 408 PNKTQCVDA------DECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAV 456
P + C DA +ECL G+C Q C NT ++CSC + T + +G +
Sbjct: 3816 PGQPGCQDASXPSPLNECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVL 3875
Query: 457 NVPQDEPASIIFSS 470
+ D +F S
Sbjct: 3876 YIADDNEIRSLFPS 3889
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1007
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1008 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1063
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C + C+ L CDG DC + DE CE + +H C P
Sbjct: 1064 NDEFQCRLDSLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 1106
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 145/365 (39%), Gaps = 103/365 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 680 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 739
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 740 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGAGSAPPTVTLLRSERPPIFEIRMYDA 799
Query: 175 ------SNQCVALSKFCD-----GKPDCSNGEDE-----GPFCNA--------ECTPGQF 210
+N+C + C G C+ ED+ G C A +C PG+F
Sbjct: 800 QQQQVGTNKCRVNNGGCSXLATPGSRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEF 859
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEM 269
+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD +
Sbjct: 860 ACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDN 918
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 919 DCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESA 969
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ C P ++ +C+ ++ CD DC + DE CSH
Sbjct: 970 SCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GCSH 1013
Query: 390 KCSPT 394
CS T
Sbjct: 1014 SCSST 1018
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4030 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4086
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 349 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 406
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIP 219
A C PNE C + CV +S+ C+G DC++G DEGP C P Q C C+P
Sbjct: 71 AQRCQPNEHNCLGTELCVLMSRLCNGVQDCADGSDEGPHCRELQGPCSQLGC-QHHCVP 128
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 29 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 88
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S C+G DC DGSDE C
Sbjct: 89 LMSRLCNGVQDC-ADGSDEGPHC 110
>gi|395519723|ref|XP_003763992.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Sarcophilus harrisii]
Length = 4631
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/329 (36%), Positives = 162/329 (49%), Gaps = 40/329 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C ++ C + QC+ CD DC +G DE P C Q +C G C
Sbjct: 84 CSSQQMTC-PNGQCIPNEYRCDRVRDCPDGADENGCQYPVCE------QLTCANGACYNT 136
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S KCDG VDC D SDE N C +C N Q QCA + +CIP +++CD + DC D +
Sbjct: 137 SQKCDGKVDC-RDSSDEVN-CTQKCLNTQFQCA-NGECIPRSFVCDHDDDCG-----DQS 188
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C C S +CI +W+CD + DC DN DE+ + H C
Sbjct: 189 DEHDCTYQTCRGNFFTCP-SGRCIHQSWICDGDDDCE-----DNADENGCESGHHE---C 239
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
+P E C S C+ + K CDG DC +GEDE G C N + C L C H+C +P
Sbjct: 240 YPGEWACPGSGHCIPIEKLCDGTLDCPSGEDETNVTAGRHC-NISQCATLSCQHRCHSSP 298
Query: 396 RGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G C+CP G N N ++ CVD D+C + G CDQ C + + C C EGY L +
Sbjct: 299 TGGTCYCPQGYVINSNDSRTCVDFDDCKMWGVCDQICEDRIGHHQCHCMEGYVLE-QHRH 357
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C A NV AS+IFS+ D+ ++G
Sbjct: 358 CRA-NVSSGV-ASLIFSNGRDLLIGDIHG 384
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/343 (34%), Positives = 147/343 (42%), Gaps = 74/343 (21%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPESWKC 224
P L +NQC+ CD DC +G DE CN C PGQF C +CI + C
Sbjct: 1083 PESLYTCDNNQCIPRIWLCDTDNDCGDGSDEKN-CNFTGTCDPGQFQCPDHRCIDPFYVC 1141
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DG+DE CI+ C + +CA +CI + + CD DC+ DN+DE
Sbjct: 1142 DGDRDC-ADGADEVG-CIYNCTASEFKCASGDQCISNIYHCDGVFDCN-----DNSDEAG 1194
Query: 285 ---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-- 339
C + QC CIP+NW CD +DC +D +DE HN L
Sbjct: 1195 CPTRPPGMCHQNEFQCQSDGTCIPNNWECDGHLDC-----MDGSDE-------HNGCLPM 1242
Query: 340 -CHPNELRCGSSN-----------------------------------------QCVALS 357
C P+ RC + N CV LS
Sbjct: 1243 TCAPSLFRCDNGNCIYRAWICDGDNDCRDMSDERDCPTQPFRCPSWQWQCPGHSICVNLS 1302
Query: 358 KFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
CD PDC NG DE P CN ++ N C+H+C P GA C CP G N +KT C
Sbjct: 1303 SVCDDIPDCPNGADESPVCNQESCSDNNAGCTHECIQGPFGAQCLCPFGYQLTNDSKT-C 1361
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
D +EC G C Q C N S C C EGY L +GK+C
Sbjct: 1362 EDINECETPGFCSQHCYNERGSSRCWCDEGYILEGNGKTCKVA 1404
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 152/334 (45%), Gaps = 40/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +CV CD DC + DE C PG F C G C+PE +KC
Sbjct: 3732 CSESEFRC-DNQRCVPSRWICDHDNDCEDNSDERDCEMRTCHPGFFQCNSGHCVPERFKC 3790
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
DG DCL D SDE +C + NG A +C H W CD + DC DN
Sbjct: 3791 DGSADCL-DFSDEA-SCPTRYPNGTYCAATMFECKNHVCIQPFWKCDGDNDCG-----DN 3843
Query: 280 TDEDWDKFHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
+DE+ H C + + + +CI + LC++E DC D +DE + +
Sbjct: 3844 SDEE---LHLCLDSPCEPPFRFRCENNRCIYSHELCNQEDDCG-----DGSDEKVEYCMN 3895
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKCSHKCS 392
+ C +E +CG+ C+ LS CD DC + DE CN A+ C+ C H C+
Sbjct: 3896 ATSKPCTEDEFKCGNG-HCIPLSYVCDNFDDCGDHFDETG-CNPGAERTCDENICEHNCT 3953
Query: 393 PTPRGA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
G +C C G N ++ C+D +EC G C Q C N+ SY C C +G+
Sbjct: 3954 NLNEGGFICSCRPGYNASAIDRNSCIDINECEQFGVCPQDCRNSKGSYECICADGFRSVG 4013
Query: 449 D--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D GK C A P ++ V IR+ +L+
Sbjct: 4014 DHEGKQCAA----DGTPPLLLLPDNVRIRKYNLS 4043
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 159/368 (43%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
++ C NE RC +S +C+ +CD DC++G DE C + C QF C G+CI
Sbjct: 2834 SLTCTSNEFRC-TSGRCIPAHWYCDQGVDCADGSDEPSSCVSHVRTCRADQFRCDDGRCI 2892
Query: 219 PESWKCDGFVDCLE-DGSDEPNTCI-HQCFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
P +W CDG DC + D+ ++C C + C ++ +CIP W+CD + DC+
Sbjct: 2893 PSTWTCDGDNDCGDMSDEDQRHSCADRNCTRSEFTCVNNRPPLRRCIPRAWICDGDADCN 2952
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
+D D++DE + C Q C
Sbjct: 2953 DAYDEHQNCTRRPCTENEFTCGNGLCIRNSYRCDRRNDCGDSSDERGCVYPPCQQYQFTC 3012
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI +LCD + DC D +DE + A C P++ +C + N C+ ++
Sbjct: 3013 Q-NGRCISKAYLCDGDNDCG-----DLSDELEHLCITPEAT-CPPHQFKCDNGN-CIEMT 3064
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
+ C+ DC++ DE G N D C H C+ T C C G +K C
Sbjct: 3065 QICNHLDDCNDNSDEKGCGINECNDPSISGCDHNCTDTQTSFYCTCLPGYKLMSDKKTCD 3124
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY PDGK C + +IFS+
Sbjct: 3125 DIDECNETPSVCSQMCENTVGSYICKCARGYIREPDGKRCRQ---NSNISPYLIFSNRYY 3181
Query: 474 IRRIHLNG 481
+R + +G
Sbjct: 3182 LRNLTADG 3189
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 117/249 (46%), Gaps = 34/249 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKC 217
+H +C + CG S +C+ + CDG+ DC +G DE C C GQF C G C
Sbjct: 3479 THCLPMCSSTQFLCGDSERCIPIWWKCDGQKDCRDGSDEPSTCPPRYCQLGQFQCNDGNC 3538
Query: 218 IPESWKCDGFVDCLEDGSDEPNT-CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ C+ +C DGSDE + C+ HQC Q QCA +K+CIP W CD E DC
Sbjct: 3539 TNPHFLCNTLREC-PDGSDEDHVLCVNHQCETHQWQCA-NKRCIPEAWQCDTEDDCG--- 3593
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DED C GQ +C + +CIP +W CD + DC D++DE +
Sbjct: 3594 --DNSDEDSAHCASRTCLPGQFKCD-NGRCIPQSWKCDVDNDCG-----DHSDEPVHECM 3645
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC------ 387
+ ++ C ++ +C+ C+G DC + DE CE + C
Sbjct: 3646 GPEYRCDNHSDFSCKTNYRCIPRWAVCNGYDDCRDNSDE-------QGCEEMTCNPLGDF 3698
Query: 388 ---SHKCSP 393
+H+C P
Sbjct: 3699 RCNNHRCIP 3707
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 99/219 (45%), Gaps = 31/219 (14%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P L+CGS + +CV CDG DC + DE N C F+C G+CI
Sbjct: 994 PPTLQCGSYSFSCNNGRCVPRYYRCDGVDDCHDNSDEQHCGTLNNTCAASAFTCAHGQCI 1053
Query: 219 PESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
P W CD DCL DGSDE P C C + +CIP WLCD + DC
Sbjct: 1054 PGRWHCDRHNDCL-DGSDEEHCPTLGPASCPESLYTCD-NNQCIPRIWLCDTDNDCG--- 1108
Query: 276 IVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE F C GQ QC +CI ++CD + DC+ D DE Y
Sbjct: 1109 --DGSDEKNCNFTGTCDPGQFQCP-DHRCIDPFYVCDGDRDCA-----DGADEVGCIYN- 1159
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C +E +C S +QC++ CDG DC++ DE
Sbjct: 1160 -----CTASEFKCASGDQCISNIYHCDGVFDCNDNSDEA 1193
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 110/253 (43%), Gaps = 44/253 (17%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQF CG G+CIP W+CDG DC +D +DE C Q QC +CIP W+
Sbjct: 4 CNSGQFRCGNGRCIPAHWRCDGAKDCSDD-TDEVGCPHPSCEASQFQCHSDGECIPRAWV 62
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CDEE DC D +DE C + Q+ C + +CIP+ + CD DC D
Sbjct: 63 CDEEEDCD-----DGSDEHQQCPGRTCSSQQMTCP-NGQCIPNEYRCDRVRDCP-----D 111
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------- 372
DE+ +Y + C ++ C S+ CDGK DC + DE
Sbjct: 112 GADENGCQYPVCEQLTC--------ANGACYNTSQKCDGKVDCRDSSDEVNCTQKCLNTQ 163
Query: 373 -----------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNKTQCVDADECL 420
C++ DC + H C+ T RG CP+G+ +++ D D+
Sbjct: 164 FQCANGECIPRSFVCDHDDDCGDQSDEHDCTYQTCRGNFFTCPSGRCIHQSWICDGDDDC 223
Query: 421 IDGSCDQTCTNTH 433
D + + C + H
Sbjct: 224 EDNADENGCESGH 236
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/370 (26%), Positives = 146/370 (39%), Gaps = 93/370 (25%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N++ ++T + WP+ + IDY D LYW D+HL+ +E ++G H +
Sbjct: 3319 IGRVGMDGTNKTVIITTKLSWPNGITIDYTNDKLYWSDAHLSYIEFSDLEGRHRHTVFDG 3378
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
L HP + + S + V ++ P
Sbjct: 3379 TLPHPFAITIFEDTVFWTDWNTRTVEKGNKYNGSGRMVLVNTTHRPFDIHVYHPYRQPIV 3438
Query: 202 NAECTPGQFSCG---MGKCIPESWKC---DGFVDCLEDGSDEPNTCIHQCFNGQVQCALS 255
N C C + K + + C D F L+ GS C+ C + Q C S
Sbjct: 3439 NNPCGINNGGCSHLCLIKAGGQGFTCECPDNF-QTLQLGS--VTHCLPMCSSTQFLCGDS 3495
Query: 256 KKCIPHNWLCDEEMDC-----------------------------------STDDIVDNT 280
++CIP W CD + DC + + D +
Sbjct: 3496 ERCIPIWWKCDGQKDCRDGSDEPSTCPPRYCQLGQFQCNDGNCTNPHFLCNTLRECPDGS 3555
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED HQC Q QCA +K+CIP W CD E DC DN+DED S
Sbjct: 3556 DEDHVLCVNHQCETHQWQCA-NKRCIPEAWQCDTEDDCG-----DNSDEDSAHCASRT-- 3607
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GP--FCNNKADCENLKCSHK 390
C P + +C + +C+ S CD DC + DE GP C+N +D + K +++
Sbjct: 3608 -CLPGQFKC-DNGRCIPQSWKCDVDNDCGDHSDEPVHECMGPEYRCDNHSDF-SCKTNYR 3664
Query: 391 CSPTPRGAMC 400
C PR A+C
Sbjct: 3665 C--IPRWAVC 3672
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 110/254 (43%), Gaps = 62/254 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C ++ +C ++ +C+ + CD + DC + DE + C PGQF C G+CIP+SW
Sbjct: 3567 CETHQWQC-ANKRCIPEAWQCDTEDDCGDNSDEDSAHCASRTCLPGQFKCDNGRCIPQSW 3625
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQ--------CALSKKCIPHNWLCD-------- 266
KCD DC D SDEP +H+C + + C + +CIP +C+
Sbjct: 3626 KCDVDNDC-GDHSDEP---VHECMGPEYRCDNHSDFSCKTNYRCIPRWAVCNGYDDCRDN 3681
Query: 267 ------EEMDC---------------------STDDIVDNTDEDWDKFHQCFNGQVQCAL 299
EEM C S DD D +DE +C + +C
Sbjct: 3682 SDEQGCEEMTCNPLGDFRCNNHRCIPLRWKCDSYDDCGDESDEQNCTPRECSESEFRCD- 3740
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+++C+P W+CD + DC DN+DE CHP +C +S CV
Sbjct: 3741 NQRCVPSRWICDHDNDCE-----DNSDER-----DCEMRTCHPGFFQC-NSGHCVPERFK 3789
Query: 360 CDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3790 CDGSADCLDFSDEA 3803
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCI 218
N C + C + +C++ CD DC +G DE A C P F+CG G+C+
Sbjct: 2669 NGTRCEGVQFTC-LNGRCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCV 2727
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
P ++CD + DC D SDE C + +CI ++C+ +C +
Sbjct: 2728 PYHYRCDHYNDC-GDNSDEAGCLFRTCDTNTEFACNNGRCISLEYVCNGINNCYDN---G 2783
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
TDE C +G +C + CIP +LCD + DC D +DE S +
Sbjct: 2784 TTDERNCPDRTCQSGFTKCQNTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---L 2835
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C NE RC +S +C+ +CD DC++G DE C
Sbjct: 2836 TCTSNEFRC-TSGRCIPAHWYCDQGVDCADGSDEPSSC 2872
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 100/219 (45%), Gaps = 19/219 (8%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C + C G C CIP ++ CDG DC
Sbjct: 2762 NNGRCISLEYVCNGINNCYDNGTTDERNCPDRTCQSGFTKCQNTNICIPRTYLCDGDNDC 2821
Query: 231 LEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
+ + P C+ C + + +C S +CIP +W CD+ +DC+ D D
Sbjct: 2822 GDMSDESPTHCVSLTCTSNEFRCT-SGRCIPAHWYCDQGVDCA--DGSDEPSSCVSHVRT 2878
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q +C +CIP W CD + DC D +DE D+ S C +E C +
Sbjct: 2879 CRADQFRCD-DGRCIPSTWTCDGDNDCG-----DMSDE--DQRHSCADRNCTRSEFTCVN 2930
Query: 350 S----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ +C+ + CDG DC++ DE C + EN
Sbjct: 2931 NRPPLRRCIPRAWICDGDADCNDAYDEHQNCTRRPCTEN 2969
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 126/350 (36%), Gaps = 102/350 (29%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R +V ++ WP+ L +DY++D LYW D++L +E + G++ V+
Sbjct: 2502 NAKIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQKIERSSLTGANREVI 2561
Query: 165 ----CHPNEL---------------------RCGSSNQCVALSKF----CDGKPDCSNGE 195
HP + + S Q V + D + +
Sbjct: 2562 ISTAIHPFAMTVYDQHIYWTDWNTRTIYRANKYDGSEQIVMIMNLPLRPMDIHVLVKSRQ 2621
Query: 196 DEGP--------FCNAECTPG----QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
+ P C+ C PG + C G + +G C+ D
Sbjct: 2622 QQCPNPCSQFNGGCSHICAPGPNGAECQCPSGG---RWYLANGNKHCITDNGTRCEGVQF 2678
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK 301
C NG +CI W CD + DC D +DE FH C C +
Sbjct: 2679 TCLNG--------RCISERWKCDNDNDCG-----DGSDELESVCAFHTCQPTAFTCG-NG 2724
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDE--------DWDKYFSHNAVLCHPNEL-------- 345
+C+P+++ CD DC DN+DE D + F+ N C E
Sbjct: 2725 RCVPYHYRCDHYNDCG-----DNSDEAGCLFRTCDTNTEFACNNGRCISLEYVCNGINNC 2779
Query: 346 ---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+C ++N C+ + CDG DC + DE P
Sbjct: 2780 YDNGTTDERNCPDRTCQSGFTKCQNTNICIPRTYLCDGDNDCGDMSDESP 2829
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S+ R+ A+++ W D PA + + ++E+A M
Sbjct: 4129 IYWSDASTNRIEVAKLDGRYRKWLVSTQLDQPAAVVVNPKLGFMYWTDWGRQPKIERAWM 4188
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G+ R LV+ ++ WP+ L IDY N D +YW DS N +ES+R DG+ ++
Sbjct: 4189 DGQQRQTLVSNDLGWPTGLSIDYLNNDRIYWSDSKENIIESMRHDGTDRRLV 4240
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G NR+ ++ I WP+ L IDY +LY+ D++L+ ++ +G+H
Sbjct: 1551 RIERASMDGTNRTVIIKDKIYWPNGLAIDYPNKLLYFMDAYLDYIDFCDYNGNHRRQVVA 1610
Query: 161 -NAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1611 SDLVLRHPHAL 1621
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR L+ + WP+ + +D +YW D + +E+V DG +
Sbjct: 508 DPKVERAFMDGTNRQDLIKTKLGWPAGITLDIISKRVYWVDCRFDYIETVTYDGLQRKTI 567
Query: 165 CHPNEL 170
H +
Sbjct: 568 AHGGAI 573
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q + C + + G CDQ C +H
Sbjct: 601 NKFSESNPQIIYQSSLRPYGVTIYHALRQPYVRNPCGNNN-----GGCDQVCVLSHRTDN 655
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L PDG+ C AV ++FSS + +R I N S
Sbjct: 656 DGLGYRCKCILGFDLHPDGRRCIAVR------QFLLFSSQLAVRGIPFNLS 700
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 35/136 (25%)
Query: 36 IVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD 95
+ DN D + I +G H +A++F D
Sbjct: 1420 VADNITSQGDNIYSLIRDGEHIVAIDF--------------------------------D 1447
Query: 96 LPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+ IF D R +K A +G +R + + S+ +D+ LYW D L T+E
Sbjct: 1448 SLSGRIFWSDIRQDKIWSAFQNGTDRKVIFDSGVTVTESIAVDWVGRNLYWTDYVLETIE 1507
Query: 153 SVRVDGSHNAVLCHPN 168
++DG+H VL N
Sbjct: 1508 VSKMDGNHRTVLISEN 1523
>gi|297668798|ref|XP_002812613.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Pongo abelii]
Length = 4624
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGTDENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPRREDENSTTTGKYCSTTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 143/300 (47%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCISVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDCT-DNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC----LYGSD 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C + C + CI WLCD + DC D +DE K C
Sbjct: 1262 EHNACVPKTCPSSYFHCD-NGNCIHRAWLCDRDNDCG-----DMSDE---KDCPTQPFRC 1312
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAM 399
+ +C N CV LS CDG DC NG DE P CN N N C+H+C P GA
Sbjct: 1313 PSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAK 1372
Query: 400 CFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L DG++C
Sbjct: 1373 CLCPLGFLLANDSKT-CEDIDECDIPGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVT 1431
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 164/412 (39%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2825 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2884
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2885 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2937
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2938 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2990
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2991 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3050
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3051 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3110
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC C Q C
Sbjct: 3111 GCGINECHDPSISGCDHNCTDTLTSFYCSCHPGYKLMSDKRTCVDIDECTETPFVCSQKC 3170
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N S++C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3171 ENVIGSFICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3219
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3514 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3573
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3574 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3626
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3627 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3680
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3681 CDNFTEFSCKTNYRCIPKWAMCNGVDDCRDNSDE 3714
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 172/445 (38%), Gaps = 118/445 (26%)
Query: 41 DEDWDKYFKRILNGTHTLALEFN--HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H L L + N + CF N + L W A
Sbjct: 3291 DARLDGLFVSDLNGGHRLMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3347
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3348 --------YIGRIGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3399
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3400 HHRHMVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3459
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3460 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3517
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3518 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3575
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3576 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3624
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNNKAD 381
N+DED S C P + RC ++ +C+ + CD DC + DE P C + A
Sbjct: 3625 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE-PIEECMSSAH 3679
Query: 382 -CENL-----KCSHKCSPTPRGAMC 400
C+N K +++C P+ AMC
Sbjct: 3680 LCDNFTEFSCKTNYRC--IPKWAMC 3702
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2744 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2802
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2803 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2857
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2858 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2909
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2910 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2952
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3722 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3780
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3781 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGTADC-----LDASDEA 3833
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3834 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3892
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3893 RCDNNRCIYGHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3951
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3952 DADDCGDWSDELGCNRGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4011
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4012 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDHPGKRCAA----EGSSPLLLLPDNVRI 4067
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4068 RKYNLS 4073
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 103/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYRCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTGTC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++ CDG DC++ DE
Sbjct: 1197 GDKCISVTNRCDGVFDCTDNSDEA 1220
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3597 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3655
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3656 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAMCNGVDDCRDNSDE 3714
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3715 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3768
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3769 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3816
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3817 ELKCDGTADCLDASDEA 3833
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYRCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTGTCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 110/273 (40%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D TDE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGTDENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D ++ H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSPHDVHKCSPRE 270
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 122/302 (40%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + ++ + DGS
Sbjct: 2576 QRIERSTLTGMDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYQANKYDGSGQIAM 2632
Query: 163 ---VLCHPNELRCGSSNQ-------CVAL----SKFCDGKPDCSNGE--DEGPFCNA--- 203
+L P + NQ C S C P+ + + EG + A
Sbjct: 2633 TTNLLSQPRGINTVVKNQRQQCNNPCEQFNGGCSHICASGPNGAECQCPHEGNWYLANNR 2692
Query: 204 ---------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2693 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2751
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2752 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2805
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2806 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2857
Query: 373 GP 374
P
Sbjct: 2858 NP 2859
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 56/112 (50%), Gaps = 5/112 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGSG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC EDG + +H+C + C S +CI +CD +DC
Sbjct: 241 CDGEDDCKDNGDEDGCESSPHDVHKCSPREWSCPESGRCISIYKVCDGILDC 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 107/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2534 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVIVN 2593
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2594 AAVHAFGLTLYGQYIYWTDLYTQRIYQANKYDGSGQIAMTTNLLSQPRGINTVVKNQRQQ 2653
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C +G + QC PH NW L + C I
Sbjct: 2654 CNNPCEQFNGG------CSHICASGPNGAECQC-------PHEGNWYLANNRKHC----I 2696
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2697 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2743
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2744 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2776
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4159 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4218
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GENR+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4219 NGENRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4270
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYSG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 RIEHSTFDGLGRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ + CD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYRCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL + D+P +
Sbjct: 2145 NGVRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYL 2204
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D + +YW D L+ + +R++
Sbjct: 2205 FWADYGQRPKIERSFLDCTNRTVLVSEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRIN 2264
Query: 158 GSHNAVL 164
G ++ V+
Sbjct: 2265 GENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERRCIAVQ------NFLIFSSQVAIRGI 722
>gi|156407460|ref|XP_001641562.1| predicted protein [Nematostella vectensis]
gi|156228701|gb|EDO49499.1| predicted protein [Nematostella vectensis]
Length = 770
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C C +S+ C+ CDG +C +G DE C P +F+C G CI W
Sbjct: 120 VTCASTYFLCPNSSHCIPRRWLCDGLAECEDGSDEKNCQKFTCAPDKFACASGGCIASRW 179
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC D SDE N C + CA + CIP + +CD E DC D +DE
Sbjct: 180 VCDGDNDC-GDNSDELNCTRLTCPPTKFLCA-NGMCIPKSAVCDGENDCG-----DMSDE 232
Query: 283 DWD-KFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ H C + QCA + +CI W CD DC+ D +DE + C
Sbjct: 233 PSNCSAHICDPKLEFQCA-NGRCINKKWRCDGMKDCA-----DGSDES-----TCGEGTC 281
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
P+E C +++C+ LS+ CDG DC + DEG C + DC+ CS +C TPRG C
Sbjct: 282 RPDEWHCIGTSRCIPLSRVCDGTNDCGDNYDEGSHCLD-LDCKKKNCSQRCVQTPRGGEC 340
Query: 401 FCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL-RPDGKSCTAVN 457
C G +K C D +EC G CD C NT SY C+C EGY L RP +C V
Sbjct: 341 RCFPGYTISKDLITCKDINECSSIGRCDHFCYNTPGSYKCACDEGYVLERP--HTCKPVG 398
Query: 458 VPQDEPASIIFSSTVDIRRIHLNGS 482
+ +IFS+ DIR++ L+G+
Sbjct: 399 PYK---PWLIFSNCKDIRQVSLDGT 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 134/336 (39%), Gaps = 62/336 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +C S +C+ S CDG+ DC + DE N C+ +F+C +C+P SWKC
Sbjct: 43 CGSRHFKCVSDGKCIPKSWRCDGEMDCPDSSDEEGCVNRTCSSKEFNCN-NQCVPLSWKC 101
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC G DE C + C S CIP WLCD +C D +DE
Sbjct: 102 DGEKDCRPGGFDEEGCEPVTCASTYFLCPNSSHCIPRRWLCDGLAECE-----DGSDEKN 156
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C + CA S CI W+CD + DC DN+DE + + C P +
Sbjct: 157 CQKFTCAPDKFACA-SGGCIASRWVCDGDNDCG-----DNSDE-----LNCTRLTCPPTK 205
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-------KADCENLKCSHK------- 390
C ++ C+ S CDG+ DC + DE C+ + C N +C +K
Sbjct: 206 FLC-ANGMCIPKSAVCDGENDCGDMSDEPSNCSAHICDPKLEFQCANGRCINKKWRCDGM 264
Query: 391 --CSPTPRGAMCFCPAGQNPNKTQCVDADECL-----IDGS------------------- 424
C+ + C P++ C+ C+ DG+
Sbjct: 265 KDCADGSDESTCG-EGTCRPDEWHCIGTSRCIPLSRVCDGTNDCGDNYDEGSHCLDLDCK 323
Query: 425 ---CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C T C C GYT+ D +C +N
Sbjct: 324 KKNCSQRCVQTPRGGECRCFPGYTISKDLITCKDIN 359
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------------ 105
LA+++ RN + + +L + L+ + DL P +D
Sbjct: 481 LAVDWVGRNLYFVESSVRRIYVSKLDGSMRTSLITT-DLSKPRGIAVDPRVGYLFWTDWE 539
Query: 106 -ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------ 158
R+E+A M G +R L N+ W ++L +DY +YW ++HL+ + ++ DG
Sbjct: 540 AHRIERANMDGSSRVILAKTNVYWANTLTLDYTLQTVYWVEAHLDYIGAMSYDGLKRREV 599
Query: 159 SHNAVLCHP 167
HN + HP
Sbjct: 600 RHNGDIIHP 608
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 161 NAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCI 218
+A +C P E +C ++ +C+ CDG DC++G DE C P ++ C G +CI
Sbjct: 237 SAHICDPKLEFQC-ANGRCINKKWRCDGMKDCADGSDESTCGEGTCRPDEWHCIGTSRCI 295
Query: 219 PESWKCDGFVDCLEDGSDEPNTCI 242
P S CDG DC D DE + C+
Sbjct: 296 PLSRVCDGTNDC-GDNYDEGSHCL 318
>gi|283837871|ref|NP_001123962.1| prolow-density lipoprotein receptor-related protein 1 precursor
[Rattus norvegicus]
gi|149066587|gb|EDM16460.1| rCG59548 [Rattus norvegicus]
Length = 4545
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 158/321 (49%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKGCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C++ K CDGK DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1150 SHPCANNTSVCLSPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1209 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---PFIIFSNRHEIRRIDLH 1286
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 155/363 (42%), Gaps = 75/363 (20%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC NGEDE CN C+ QF C +CI + W CDG DC DG
Sbjct: 2706 SGRCIPMSWTCDKEDDCENGEDE-THCNKFCSEAQFECQNHRCISKQWLCDGSDDC-GDG 2763
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQ 289
SDE C + C C + C+P WLCD + DC+ D DE
Sbjct: 2764 SDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCA-----DGADESISAGCLYNST 2818
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG- 348
C + + C ++ CIP +++CD + DC+ D +DE + + C PNE RC
Sbjct: 2819 CDDREFMCQ-NRLCIPKHFVCDHDRDCA-----DGSDESPECEYP----TCGPNEFRCAN 2868
Query: 349 ---------------------------------------------SSNQCVALSKFCDGK 363
SS +CVA + C+G+
Sbjct: 2869 GRCLSSRQWECDGENDCHDHSDEAPKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQ 2928
Query: 364 PDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECL 420
DC +G DE N+ L CS C G C C G + C D DEC
Sbjct: 2929 DDCGDGSDERGCHVNECLSRKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECS 2988
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C Q C NTH SY C C EGY R D SC AV DE +IF++ +R+++L
Sbjct: 2989 TTFPCSQLCINTHGSYKCLCVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNL 3045
Query: 480 NGS 482
+GS
Sbjct: 3046 DGS 3048
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 102/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C + +C + C H C PTP G C+C
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCRELRVNCSRMGCQHHCVPTPSGPTCYCN 137
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 138 NSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 196
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 197 DRPPVLLIANSQNILATYLSGA 218
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 150/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3596 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3646
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3647 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEEC---TRF 3694
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3695 QCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQR 3754
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C G
Sbjct: 3755 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRPGF 3814
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3815 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3874
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3875 DDNEIRSLF 3883
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3344 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3402
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3403 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3457
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3458 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3508
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3509 IPARWKCDGEDDCGDGSDE 3527
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2575 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2633
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2634 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2691
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2692 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCENGE-----DE------THCNKFCSEAQ 2739
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2740 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2774
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 765 SVYRLERGVAGAQPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 134/317 (42%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP--FCNAE 204
H LCH E R GS + L + G +P + E P F
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVAGAQPTVTLLRSERPPIFEIRM 795
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 796 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 853
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA + +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 854 --QCQPGEFACA-NNRCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 904
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 905 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 955
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 956 CDLDDDCGDRSDESASC 972
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4026 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4082
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3171 IGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVV 3227
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2033 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2087
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2355 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2414
Query: 164 L 164
+
Sbjct: 2415 I 2415
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2642
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2643 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2686
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1407 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1459
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1460 YSARYDGSGHMEVLRGHEF 1478
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHC 109
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 80/213 (37%), Gaps = 55/213 (25%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + Q +C S +CIP +W CD + DC D D T + R G H+ EF
Sbjct: 1014 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHS--DEF 1068
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
R LC +R RC D ++S D + G G
Sbjct: 1069 QCRLDGLCI-------PLRWRCDGDTDCMDSSD--------------EKGCEG------- 1100
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV-DGSHN-----------AVLCHPNEL 170
+ V D N + + C + V DG + A+ C P
Sbjct: 1101 -------VTHVCDPN--VKFGCKDSARCISKAWVCDGDSDCEDNSDEENCEALACRPPSH 1151
Query: 171 RCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C +++ C++ K CDGK DC +G DEG C+
Sbjct: 1152 PCANNTSVCLSPDKLCDGKDDCGDGSDEGELCD 1184
>gi|260828979|ref|XP_002609440.1| hypothetical protein BRAFLDRAFT_93487 [Branchiostoma floridae]
gi|229294796|gb|EEN65450.1| hypothetical protein BRAFLDRAFT_93487 [Branchiostoma floridae]
Length = 1291
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 123/326 (37%), Positives = 153/326 (46%), Gaps = 27/326 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIP 219
AV C + +C C+ +S CDG DC + DE C+ E C+ +F C G+CI
Sbjct: 654 GAVTCPAGQFQCLQGYPCIQMSWRCDGYKDCPDNSDEEGGCDYESCSENEFRCRSGQCIL 713
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC ED SDE N I + QCA CIP+ WLCD + DC VD
Sbjct: 714 GSWKCDGDNDC-EDQSDEANCEITAAPDCDGFQCADHSHCIPNVWLCDFKNDC-----VD 767
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE H C ++QC + +C+P W CD + DC+ D DE D V
Sbjct: 768 GSDESNCTLHTCHPMELQCG-TGECVPLRWKCDGDEDCT-----DGADEQ-DCAIGGEFV 820
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCSPTPR 396
C CG CV L CD P C NG DEG C + C+ C+ C PTP
Sbjct: 821 DCTEG-YPCGD-GLCVQLQAVCDRVPHCRNGNDEGGKCGPQL-CQTSPCAGPADCYPTPD 877
Query: 397 GAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G +C C G N + C D +EC GSC Q C NT SY CSC +GY + G C
Sbjct: 878 GPLCHCHEGFNISSDNITCEDVNECATPGSCSQGCDNTKGSYRCSCRDGYYMEL-GTKCK 936
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLN 480
A Q ++ SS DIR L
Sbjct: 937 A----QGPNPVLVVSSRHDIRTQDLR 958
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/328 (32%), Positives = 147/328 (44%), Gaps = 67/328 (20%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C ++ RC + + C+ S CD DC +G DE +++C + CG G+C+ +W
Sbjct: 106 AVCSADQFRCLTGD-CIPSSVRCDNNTDCPDGSDERGCYHSKCKDDYWQCGTGECVRVAW 164
Query: 223 KCDGFVDCLEDGSDEPNTCIH-------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CDG DC D SDE N H +C + Q +C+ S +CI W CD + DC
Sbjct: 165 LCDGETDCT-DNSDEDNCNGHTVTSGGSECLSHQFRCS-SGECIESLWHCDGDKDCQ--- 219
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D TDE H C GQV C CI H WLCD E+DC D DE D SH
Sbjct: 220 --DGTDEHRCGVHTCQAGQVMCD-DGLCISHTWLCDGELDCR-----DGFDEQ-DCGSSH 270
Query: 336 NAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
VL C + C S C+ S C+G DC +G DEG
Sbjct: 271 PPVLPSCKATQFTC-SDGSCIDRSLLCNGDEDCRDGSDEG-------------------- 309
Query: 394 TPRGAMCFCPAGQNPNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
TQCV D C++ G+C Q C T S+ CSC +GY + PDG +
Sbjct: 310 -----------------TQCV-VDHCVLHFGACSQLCDATESSFKCSCVDGYKMEPDGST 351
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A+ +EP ++ S + +H++
Sbjct: 352 CRAMG---EEPYLLVAESNSIRKVVHIH 376
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++E AGM G R L + + WP+ LVID++ D +YW D+ L+ V+ + +DG ++
Sbjct: 1097 KIEVAGMDGSQRRVLENQLVGWPNDLVIDFSLDKIYWIDAKLDIVQRMDLDGGNSETVLE 1156
Query: 164 --LCHPNEL 170
L HP L
Sbjct: 1157 GQLQHPFSL 1165
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 11/114 (9%)
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLN--------SWDLPAPEIF---PLDERLEKAGMH 114
N L + ++ + LR Q N ++N S+D ++ DE + +
Sbjct: 941 NPVLVVSSRHDIRTQDLRTGQYNSVVNHLRNTVALSFDSVEERLYWTDVSDEVISSVKLG 1000
Query: 115 GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
GE+ ++T ++ P L +D+ LYW D+ NT+ +DG+H VL N
Sbjct: 1001 GEDIRRVITTGLKTPDGLAVDWVGRNLYWTDAGYNTISVSTMDGAHQTVLLGDN 1054
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 19/100 (19%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
DKF QC NG +CIP +W+CD + DC+ DN+DE AV C +
Sbjct: 622 DKF-QCDNG--------RCIPSHWVCDTDNDCA-----DNSDES-----KCGAVTCPAGQ 662
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+C C+ +S CDG DC + DE C+ ++ EN
Sbjct: 663 FQCLQGYPCIQMSWRCDGYKDCPDNSDEEGGCDYESCSEN 702
>gi|397507745|ref|XP_003824348.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Pan
paniscus]
Length = 4655
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 142/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPTQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPAPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2949
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 154/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCLPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYRCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPTQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYRCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P + C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPTQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D ++ H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSPHDVHKCSPRE 270
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGMDREVIVNAAVH---AFGLALYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGSG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESSPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 105/277 (37%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R +V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLALYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ + CD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYRCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N L F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYLTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|403259169|ref|XP_003922099.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Saimiri boliviensis boliviensis]
Length = 4618
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 145/300 (48%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ +S CDG DC +G DE C CT QF C G KCI +
Sbjct: 1111 CQPSQFNC-PNHRCIDISFVCDGDRDCVDGSDEVG-CVLNCTASQFKCASGDKCISITKH 1168
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP W CD +DC + +
Sbjct: 1169 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGDCIPKFWECDGHLDC----LYGSD 1223
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C + C + CI WLCD++ DC D +DE K C
Sbjct: 1224 EHNACVPKTCPSSYFLCG-NGNCIHRAWLCDQDNDCG-----DMSDE---KDCPTQPFHC 1274
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAM 399
+ +C N CV LS CDG DC NG DE P CN N N C+H+C P GA
Sbjct: 1275 PSWQWQCLGHNICVNLSVVCDGTFDCPNGTDESPLCNQNSCSDFNGGCTHECVQEPFGAK 1334
Query: 400 CFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP+G N +KT C D DEC I GSC Q C N S+ CSC GY L DG++C A
Sbjct: 1335 CLCPSGFVLANDSKT-CEDVDECDIPGSCSQQCYNLRGSFRCSCDTGYLLESDGRTCKAA 1393
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 160/328 (48%), Gaps = 28/328 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPES 221
V C C S QC+ S CD DC +G DE C+ + C+ Q +C G+CIP
Sbjct: 65 VTCQQGYFNCQSDGQCIPNSWVCDQDQDCDDGSDELQHCSQSTCSSHQITCSNGQCIPGE 124
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
++CD DCL DG+DE + C Q+ C + C ++ CD ++DC D +D
Sbjct: 125 YRCDHVRDCL-DGADEKDCEYPTC--EQLTCD-NGACYNNSQKCDSKVDCR-----DFSD 175
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + C Q C + +CI NW+CD E DC DN DED + H C
Sbjct: 176 ELNCNYPTCGGYQFTCP-NGRCIYQNWVCDGEDDCK-----DNGDEDGCESSPHGVDKCS 229
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPR 396
P E C S +C+ + K CDG DC EDE G +C C L C ++C TP
Sbjct: 230 PREWSCPESGRCIPIYKVCDGVLDCPGKEDENSTATGKYCGTTL-CSALNCQYQCRETPY 288
Query: 397 GAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G +CFCP G + N CV+ D+C I G CDQ C + ++C C EGY L G+ C
Sbjct: 289 GGVCFCPPGYSINHNDSRTCVEFDDCQIWGICDQRCESRPGHHLCHCEEGYILE-RGQHC 347
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
A + + AS+IFS+ D+ ++G
Sbjct: 348 KANDSFGE--ASVIFSNGRDLLIGDIHG 373
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 114/376 (30%), Positives = 160/376 (42%), Gaps = 82/376 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C +E +C +S C+ +CD + DCS+ DE C + C +F C G+CIP
Sbjct: 2826 CSSDEFQC-TSGHCIPQHWYCDDEADCSDASDEPASCGRQVRTCLSDEFKCDDGRCIPSE 2884
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS-----------KKCIPHNWLCDEEMD 270
W CDG DC D SDE HQC G C+ + ++CIP +W+CD ++D
Sbjct: 2885 WICDGDNDC-GDMSDEDER--HQC--GNQNCSHTDFFCVNNRPPERRCIPQSWVCDGDVD 2939
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D DE+ + C + CA CIP + CD DC D +DE
Sbjct: 2940 CA-----DGYDENQNCTRRTCSENEFTCAYGL-CIPAVFRCDRYNDCG-----DYSDERG 2988
Query: 330 DKY---------------FSHNAV----------------LCH-------PNELRCGSSN 351
Y S + V LCH P+E +C +
Sbjct: 2989 CSYPTCQENQFTCQNGRCISKSFVCDDDNDCGDGSDELTHLCHTLQPTCPPHEFKC-DNG 3047
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKCSPTPRGAMCFCPAGQN- 407
+C+ + K C+ DC + DE N +C+N C H C+ T C C G
Sbjct: 3048 RCIEMMKLCNHLDDCLDNSDEKGCGIN--ECQNPSISGCDHNCTDTLTSFYCSCRPGYKL 3105
Query: 408 -PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
+K CVD DEC C Q C N SY+C C GY PDGK+C + EP
Sbjct: 3106 MSDKRTCVDIDECTETPFVCSQKCENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY- 3162
Query: 466 IIFSSTVDIRRIHLNG 481
+IFS+ +R + ++G
Sbjct: 3163 LIFSNRYYLRNLTVDG 3178
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 151/361 (41%), Gaps = 84/361 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C + C+ +F C G CIP+ W
Sbjct: 2784 CQSGYTKCQNSNICIPRIYLCDGDNDCGDNSDENPIYCTTQTCSSDEFQCTSGHCIPQHW 2843
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C + C + + +C +CIP W+CD + DC D
Sbjct: 2844 YCDDEADC-SDASDEPASCGRQVRTCLSDEFKCD-DGRCIPSEWICDGDNDCG-----DM 2896
Query: 280 TDEDWDKFHQCFNGQVQCALS-----------KKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DE D+ HQC G C+ + ++CIP +W+CD ++DC+ +
Sbjct: 2897 SDE--DERHQC--GNQNCSHTDFFCVNNRPPERRCIPQSWVCDGDVDCA---------DG 2943
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCN-NKADCE 383
+D+ + C NE C + C+ CD DC + DE P C N+ C+
Sbjct: 2944 YDENQNCTRRTCSENEFTC-AYGLCIPAVFRCDRYNDCGDYSDERGCSYPTCQENQFTCQ 3002
Query: 384 NLKCS-----------------------HKCSPTPRGAMCFCPAGQNPNKTQ-CVDADEC 419
N +C H PT C G+ + C D+C
Sbjct: 3003 NGRCISKSFVCDDDNDCGDGSDELTHLCHTLQPTCPPHEFKCDNGRCIEMMKLCNHLDDC 3062
Query: 420 L-----------------IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
L I G CD CT+T S+ CSC GY L D ++C ++ +
Sbjct: 3063 LDNSDEKGCGINECQNPSISG-CDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTET 3121
Query: 463 P 463
P
Sbjct: 3122 P 3122
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 134/327 (40%), Gaps = 26/327 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD DC + DE C P F C G C+ KC
Sbjct: 3721 CTESEFRC-VNQQCIPSRWICDHYNDCGDNSDERDCEMRTCHPEYFQCTSGHCVRSDLKC 3779
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCSTDDIVDNT 280
DG DCL D SDE + Q + + CIP W CD + DC D +
Sbjct: 3780 DGTADCL-DASDEADCPTRFPDGAYCQATMFECKNHVCIPQYWKCDGDNDCG-----DGS 3833
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE+ HQC N +C + + E+ D+ D TDE + C
Sbjct: 3834 DEE---LHQCLNIPCNSPDRFRCDNNRCIYGHELCNGVDNCGDGTDETEEHCRKPTPKPC 3890
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA- 398
E +CG+ C+ CD DC + DE G + C C C+ G
Sbjct: 3891 TEYEYKCGNG-HCIPHDSVCDDADDCGDLSDELGCNIGKERTCAENICEQNCTQLNEGGF 3949
Query: 399 MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSC 453
+C C AG ++T C+D +EC G C Q C NT SY C C +G+T D GK C
Sbjct: 3950 ICSCTAGFETSVFDRTSCLDINECEQFGICSQHCRNTKGSYECVCADGFTSMSDRLGKRC 4009
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLN 480
A + ++ V IR+ +L+
Sbjct: 4010 AA----EGSSPLLLLPDNVRIRKYNLS 4032
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 117/409 (28%), Positives = 154/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3250 DAHLDSLFVSDLNGKHRRMLAQHCVDANNTFCF---DNPRGIVLHPQYGYIYWADWGHRA 3306
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3307 --------YIGRVGMDGANKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3358
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS L
Sbjct: 3359 RNRHTVYDGTLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSKRQTLVNTTHRPFDIHV 3418
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3419 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCLPMCSS 3476
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDEP C + C GQ QC+ C LC
Sbjct: 3477 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDEPTLCPQRFCRLGQFQCS-DGNCTSPQSLC 3534
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED H+C + QCA +K+CIP +W CD DC D
Sbjct: 3535 NAHQNCP-----DGSDEDRLLCDNHRCDTNEWQCA-NKRCIPESWQCDTFNDCE-----D 3583
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3584 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3628
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3473 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDEPTLCPQRFCRLGQFQCSDGNCTSPQS 3532
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H+C + QCA +K+CIP +W CD DC DN+
Sbjct: 3533 LCNAHQNC-PDGSDEDRLLCDNHRCDTNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3585
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3586 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3639
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3640 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3673
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 104/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+P F+CG G+CIPE W CD DC+ DG
Sbjct: 999 RCVPQYYRCDGVDDCHDNSDEQLCGTLNNTCSPSAFTCGHGECIPEHWHCDKHNDCV-DG 1057
Query: 235 SDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE P C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1058 SDEQNCPTEAPASCLDTQYTCD-NHQCISMNWVCDTDNDCG-----DGSDEKNCNSTETC 1111
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1112 QPSQFNCP-NHRCIDISFVCDGDRDC-----VDGSDE-------VGCVLNCTASQFKCAS 1158
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C++++K CDG DCS+ DE
Sbjct: 1159 GDKCISITKHCDGVFDCSDNSDEA 1182
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 105/221 (47%), Gaps = 21/221 (9%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RCG+S+ +C+A CD DC +G DE A C+P F+C G+C+P
Sbjct: 2658 NGQRCGASSFTCSNGRCIAAEWKCDTDNDCGDGSDEMESVCALHTCSPTAFTCANGRCVP 2717
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S++CD + DC DGSDE C +++CIP ++C+ +C + +
Sbjct: 2718 YSYRCDFYNDC-GDGSDEEGCLFRDCNATTEFMCSNRRCIPREFVCNGVDNCHDN---NT 2773
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C +G +C S CIP +LCD + DC DN+DE+
Sbjct: 2774 SDEKNCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDCG-----DNSDEN---PIYCTTQT 2825
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +E +C +S C+ +CD + DCS+ DE C +
Sbjct: 2826 CSSDEFQC-TSGHCIPQHWYCDDEADCSDASDEPASCGRQV 2865
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3556 CDTNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3614
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3615 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3673
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3674 QGCEERTCRPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCVPRECTESEFR 3727
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3728 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVRS 3775
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3776 DLKCDGTADCLDASDEA 3792
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 96/215 (44%), Gaps = 11/215 (5%)
Query: 174 SSNQCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
S+ +C+ C+G +C +N DE + C G C CIP + CDG DC
Sbjct: 2751 SNRRCIPREFVCNGVDNCHDNNTSDEKNCPDRTCQSGYTKCQNSNICIPRIYLCDGDNDC 2810
Query: 231 LEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
++ + P C Q C + + QC S CIP +W CD+E DCS D D +
Sbjct: 2811 GDNSDENPIYCTTQTCSSDEFQCT-SGHCIPQHWYCDDEADCS--DASDEPASCGRQVRT 2867
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + +C +CIP W+CD + DC D + ++ SH C N
Sbjct: 2868 CLSDEFKCD-DGRCIPSEWICDGDNDCGDMSDEDERHQCGNQNCSHTDFFCVNNR---PP 2923
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+C+ S CDG DC++G DE C + EN
Sbjct: 2924 ERRCIPQSWVCDGDVDCADGYDENQNCTRRTCSEN 2958
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P+ ++CDG DC D SDE T + C C +CIP
Sbjct: 987 QCGLFSFPCKNGRCVPQYYRCDGVDDC-HDNSDEQLCGTLNNTCSPSAFTCG-HGECIPE 1044
Query: 262 NWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE + C + Q C + +CI NW+CD + DC
Sbjct: 1045 HWHCDKHNDC-----VDGSDEQNCPTEAPASCLDTQYTCD-NHQCISMNWVCDTDNDCG- 1097
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ +S CDG DC +G DE
Sbjct: 1098 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDISFVCDGDRDCVDGSDE 1142
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 51/306 (16%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHN 161
P +R+E++ + G +R +V + + + Y Q I YW D + + + DGS
Sbjct: 2532 PSLQRIERSTLTGMDREVIVNAAVH--AFGLTLYGQHI-YWTDLYTQRIYRANKYDGSGQ 2588
Query: 162 A-----VLCHPNELRCGSSNQ-------CVAL----SKFCDGKPDCSNGE--DEGPFCNA 203
+L P + NQ C S C P+ + + EG + A
Sbjct: 2589 IAITTDLLFQPRGINIVVKNQKQQCNNPCEQFNGGCSHICSPGPNGAECQCPHEGNWYLA 2648
Query: 204 ------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQ 249
C F+C G+CI WKCD DC DGSDE + +H C
Sbjct: 2649 NNRKHCIVDNGQRCGASSFTCSNGRCIAAEWKCDTDNDC-GDGSDEMESVCALHTCSPTA 2707
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
CA + +C+P+++ CD DC D +DE+ F C +++CIP ++
Sbjct: 2708 FTCA-NGRCVPYSYRCDFYNDCG-----DGSDEEGCLFRDCNATTEFMCSNRRCIPREFV 2761
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
C+ +C ++ D + D+ C +C +SN C+ CDG DC +
Sbjct: 2762 CNGVDNCHDNNTSDEKNCP-DR-------TCQSGYTKCQNSNICIPRIYLCDGDNDCGDN 2813
Query: 370 EDEGPF 375
DE P
Sbjct: 2814 SDENPI 2819
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 85/213 (39%), Gaps = 54/213 (25%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F C G CIP+ W+CDG DCL+D SDE C G C +CIP++W
Sbjct: 27 ECDSEHFRCRNGHCIPKDWRCDGTKDCLDD-SDEIGCAPVTCQQGYFNCQSDGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE CS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDELQHCSQS--------------TCSSHQITCS-NGQCIPGEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC +D DE +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDC-----LDGADEKDCEYPTCEQLTC--------DNGACYNNSQKCDSKVDCRDFSDE- 176
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
L C++ PT G CP G+
Sbjct: 177 -----------LNCNY---PTCGGYQFTCPNGR 195
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 23/122 (18%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4118 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPTAVAVNPKLGLMFWTDWGKEPKIESAWM 4177
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC----HPN 168
+GE+R+ LV N+ WP+ L IDY N D +YW D + +E+V+ DG+ V+ HP
Sbjct: 4178 NGESRNVLVFGNLGWPTGLSIDYLNNDRIYWSDFKEDVIETVKFDGTDRRVIAKEAMHPY 4237
Query: 169 EL 170
L
Sbjct: 4238 SL 4239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 138/384 (35%), Gaps = 80/384 (20%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
D ++K I + L R + ++ N SV + W PA
Sbjct: 764 DSHYKSI----SVMGLADKMRRTVVQYLN--NPRSVVIHPLAGYLFFTDWFRPA------ 811
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------ 158
++ +A G + P+V + WP++L ID+ LYW D++ + +E DG
Sbjct: 812 --KIMRAWSDGSHLLPIVNTTLGWPNALAIDWAASRLYWIDAYFDKIEHSTFDGLDRRRL 869
Query: 159 SHNAVLCHPNEL------------RCGS---------SNQCVALSKFC------------ 185
H + HP L R G+ V S
Sbjct: 870 GHIEQMTHPFGLTVFGEHLFFTDWRLGAIIRVRKADGGGMTVIRSGIAYLLHLKSYDINI 929
Query: 186 -DGKPDCSNGEDEGPFCNAECTP---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
G CS C+ C P Q CG C + C D S+EP T
Sbjct: 930 QTGSNACSQPTHPNGDCSHFCFPVPNFQRVCG---CPYGMRLASNHLTCEGDPSNEPPT- 985
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCFNGQVQCAL 299
QC C + +C+P + CD DD DN+DE + C C
Sbjct: 986 -EQCGLFSFPCK-NGRCVPQYYRCD-----GVDDCHDNSDEQLCGTLNNTCSPSAFTCG- 1037
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+CIP +W CD+ DC VD +DE + C + C ++QC++++
Sbjct: 1038 HGECIPEHWHCDKHNDC-----VDGSDE--QNCPTEAPASCLDTQYTC-DNHQCISMNWV 1089
Query: 360 CDGKPDCSNGEDEGPFCNNKADCE 383
CD DC +G DE CN+ C+
Sbjct: 1090 CDTDNDCGDGSDEKN-CNSTETCQ 1112
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 492 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGITLDLISKRVYWVDSRFDYIETVTYDGI 551
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 552 QRKTVVHGGSL 562
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G RS +V I WP L IDY +LY+ DS+L+ ++ +G H
Sbjct: 1540 RIERASMDGSMRSVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNGHHRRQVIA 1599
Query: 161 -NAVLCHPNEL 170
+ V+ HP L
Sbjct: 1600 SDLVIRHPYAL 1610
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/162 (17%), Positives = 66/162 (40%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2072 YWCDFSSSVTSDNAIRRIKPDGSSLMNIVTQGIGENGVRGIAVDWVAGNIYFTNAFVSET 2131
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2132 LIEVLRINTTYRRVLLKATVDMPRHIVVDPKNRYLFWADYGQRPKIERSALDCTNRTVLV 2191
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + + + G ++ V+
Sbjct: 2192 SEGIVTPRGLAVDRSNGYVYWVDDSLDIIARIHISGENSEVI 2233
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ +D+ LYW D L T+E ++DGSH VL N
Sbjct: 1455 AFQNGTDRRVVFDSSIVLTETIAVDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1512
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + P Q C D + G C+Q C +H
Sbjct: 590 NKFTETNPQVYYQTSLKPYGVTVYHPLSQPYATNPCKDNN-----GGCEQVCVLSHRTDN 644
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C A+ +IFSS + +R I
Sbjct: 645 DGLGFRCKCTFGFQLDMDERRCIAIQ------NFLIFSSQLAVRGI 684
>gi|148695088|gb|EDL27035.1| mCG129621 [Mus musculus]
Length = 4105
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 162/329 (49%), Gaps = 32/329 (9%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C +L C S+ QCV + CD DC +G DE C Q +C G C S
Sbjct: 105 GTTCSSQQLTC-SNGQCVPIEYRCDHVSDCPDGSDERNCYYPTCD--QLTCANGACYNTS 161
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
KCD VDC D SDE N C C + QC S +CI ++CD + DC DN+D
Sbjct: 162 QKCDHKVDC-RDSSDEAN-CTTLCSQKEFQCG-SGECILRAYVCDHDNDCE-----DNSD 213
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLC 340
E + C Q C+ + +CI NW+CD + DC D+ DED + H+ C
Sbjct: 214 EHNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQRHHT--C 265
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
+P E C S +C+++ K CDG PDC GEDE G +C C L C ++C TP
Sbjct: 266 YPREWACPGSGRCISMDKVCDGVPDCPEGEDENNATSGRYCGTGL-CSILNCEYQCHQTP 324
Query: 396 RGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G CFCP G N N ++ C+D D+C I G CDQ C + + C C EGY L G+
Sbjct: 325 YGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILE-RGQH 383
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C + + ASIIFS+ D+ L+G
Sbjct: 384 CKSND--SFSAASIIFSNGRDLLVGDLHG 410
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 142/299 (47%), Gaps = 23/299 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
CHP + RC ++C++ CDG DC +G DE C CT QF C G CI ++
Sbjct: 1150 CHPTQFRC-PDHRCISPLYVCDGDKDCVDGSDEAG-CVLNCTSSQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-KDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDC-----IQGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI ++W+CD + DC D+ D D + C
Sbjct: 1262 DEHNGCVPKTCSPSHFLCDNGNCIYNSWVCDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGAM 399
++ +C + CV LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSSQWQCPGYSICVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CVCPIGYQLANDTKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVT 1432
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 159/367 (43%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C NE +C S ++C+ FCDG+ DC + DE C C+ QF C G+CI S
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISSS 2924
Query: 222 WKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS--- 272
W CDG DC + D + + C + + C S+ +CIP +W+CD + DC+
Sbjct: 2925 WVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCADAL 2984
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C + Q C +
Sbjct: 2985 DELQNCTMRACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQ-N 3043
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKF 359
+CI ++CDE+ DC D +DE ++ H C P++ RC + C+ +
Sbjct: 3044 GQCITKLYVCDEDNDCG-----DGSDEQ--EHLCHTPEPTCPPHQFRC-DNGHCIEMGTV 3095
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C H C+ T C C G +K CVD
Sbjct: 3096 CNHVDDCSDNSDEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDI 3155
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGKSC + EP ++FS+ IR
Sbjct: 3156 DECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LVFSNRYYIR 3212
Query: 476 RIHLNGS 482
+ ++G+
Sbjct: 3213 NLTIDGT 3219
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 69/356 (19%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIP 219
+ C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2821 ITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCVSPHRCIP 2880
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W CDG DC+ D SDEP+TC H C Q C + +CI +W+CD + DC D+
Sbjct: 2881 SYWFCDGEADCV-DSSDEPDTCGHSLNSCSANQFHCD-NGRCISSSWVCDGDNDCG--DM 2936
Query: 277 VDNTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D + C + + C S ++CIP +W+CD + DC+ + D+
Sbjct: 2937 SDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCA---------DALDEL 2987
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNNKADCENLKC 387
+ C E C ++ +C+ S CD + DC + DE P +++ C+N +C
Sbjct: 2988 QNCTMRACSTGEFSC-ANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQNGQC 3046
Query: 388 SHKC-----------SPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS------------ 424
K + +C P P D C+ G+
Sbjct: 3047 ITKLYVCDEDNDCGDGSDEQEHLCHTPEPTCPPHQFRCDNGHCIEMGTVCNHVDDCSDNS 3106
Query: 425 -----------------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
CD CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3107 DEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDIDECKETP 3162
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 151/376 (40%), Gaps = 78/376 (20%)
Query: 162 AVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V CHP+ + RCG+ + C+ L CDG DC + DE ECT +F C +CIP
Sbjct: 3667 SVPCHPSGDFRCGN-HHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCADQQCIPS 3725
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CD DC D SDE + + C QC S C+P CD DC +D +
Sbjct: 3726 RWVCDQENDC-GDNSDERDCEMKTCHPEHFQCT-SGHCVPKALACDGRADC-----LDAS 3778
Query: 281 DED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DE + C +C + CI W+CD E DC VD +DE+ F
Sbjct: 3779 DESACPTRFPNGTYCPAAMFECK-NHVCIQSFWICDGENDC-----VDGSDEEIHLCF-- 3830
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------- 374
N P RC +S +C+ + C+G DC +G DE
Sbjct: 3831 NVPCESPQRFRCDNS-RCIYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNG 3889
Query: 375 -------FCNNKADCENLK-----------------CSHKCSPTPRGA-MCFCPAGQNP- 408
C+N DC +L C C+ G +C C G P
Sbjct: 3890 NCVSQHYVCDNVDDCGDLSDETGCNLGENRTCAEKICEQNCTQLSNGGFICSCRPGFKPS 3949
Query: 409 --NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPA 464
+K C D +EC G C Q+C N+ SY C C +G+ G+ C A P
Sbjct: 3950 TLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAA----DGSPP 4005
Query: 465 SIIFSSTVDIRRIHLN 480
++ V IR+ +++
Sbjct: 4006 LLLLPENVRIRKYNIS 4021
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3462 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQA 3521
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + QCA +K+CIP W CD S DD +DN+
Sbjct: 3522 LCNARQDC-ADGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNS 3574
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE + +
Sbjct: 3575 DEDPSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIHECMTAAYN 3628
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3629 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3662
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 110/253 (43%), Gaps = 62/253 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ CD DC + DE P + C PGQF C G+CIP+SW
Sbjct: 3545 CEANEWQC-ANKRCIPEYWQCDSVDDCLDNSDEDPSHCASRTCRPGQFKCNNGRCIPQSW 3603
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNG--------QVQCALSKKCIPHNWLCDEEMDC--- 271
KCD DC D SDEP IH+C + C + +CIP +C+ DC
Sbjct: 3604 KCDVDNDC-GDYSDEP---IHECMTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDN 3659
Query: 272 --------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCAL 299
DD DN+DE+ +C + +CA
Sbjct: 3660 SDEQGCESVPCHPSGDFRCGNHHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCA- 3718
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
++CIP W+CD+E DC DN+DE CHP +C +S CV +
Sbjct: 3719 DQQCIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALA 3767
Query: 360 CDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 3768 CDGRADCLDASDE 3780
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +CV CD DC + DE C + +F+C G+CIP S+ C+G +C +
Sbjct: 2750 ANGRCVPYHYRCDFYNDCGDNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHD 2809
Query: 233 -DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQ 289
D SDE N C +C + C+P +LCD + DC D +DE+ + H
Sbjct: 2810 NDTSDEKNCPPITCQPDFAKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT 2864
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + QC +CIP W CD E DC VD++DE H+ C N+ C
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADC-----VDSSDE--PDTCGHSLNSCSANQFHC-D 2916
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ +C++ S CDG DC + DE + + CE CS
Sbjct: 2917 NGRCISSSWVCDGDNDCGDMSDE----DQRHHCELQNCS 2951
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 136/326 (41%), Gaps = 55/326 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +++ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGSNREVVISTAFH---SFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQQQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C A C QF+C G+CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGARCNQFQFTCLNGRCISQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 A-NGRCVPYHYRCDFYNDCG-----DNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPFCNNKADCEN--LKC--SHKCSPT 394
P C + +C H+C P+
Sbjct: 2856 NPIYCASHTCRSNEFQCVSPHRCIPS 2881
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C++ CD DC +G DE P A C F+C G+C+P ++CD + DC D
Sbjct: 2712 RCISQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCANGRCVPYHYRCDFYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE C
Sbjct: 2771 SDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPITCQPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S ++C+
Sbjct: 2828 AKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCVSPHRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCN--------NKADCENLKC 387
FCDG+ DC + DE C N+ C+N +C
Sbjct: 2880 PSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRC 2920
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSGQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCGSGFFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
IP +W+CD++ DCS D DE + C + Q+ C+ + +C+P + CD DC
Sbjct: 81 IPSSWVCDQDKDCS-----DGADEQQNCPGTTCSSQQLTCS-NGQCVPIEYRCDHVSDCP 134
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 -----DGSDERNCYYPTCDQLTC--------ANGACYNTSQKCDHKVDCRDSSDEA 177
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 157/424 (37%), Gaps = 126/424 (29%)
Query: 48 FKRILNGT-HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN-DLLNSWDLPAPEIFPLD 105
+ IL G + +AL+F+ + L +I + R+ + N + + S L E +D
Sbjct: 3221 YSLILQGLGNVVALDFDRVEERLYWIDAEKQIIERMFLNKTNQETIISHRLRRAESLAVD 3280
Query: 106 --------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI----------- 140
+ + GM G N++ +++ I+WP+++ IDY D+
Sbjct: 3281 WVSRYVYWADWGDHAYIARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 141 ------------------------------LYWCDSHLNTVESV-RVDGSHNAVLCH--- 166
++W D + TVE + DGS VL +
Sbjct: 3341 EFSDLEGHHRHTVYDGTLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH 3400
Query: 167 -PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
P ++ + +S C +N C + F+C +C P+ ++
Sbjct: 3401 KPFDIHVLHPYRQPIMSNPC-----ATNNGGCSHLCLIKAGGRGFTC---EC-PDDFQTV 3451
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS------------- 272
D C+ C + Q C ++KCIP W CD + DCS
Sbjct: 3452 QLRD--------RTLCMPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRF 3503
Query: 273 ----------------------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
D D +DED + H+C + QCA +K+CIP W
Sbjct: 3504 CRLGQFQCRDGNCTSPQALCNARQDCADGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYW 3562
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
CD S DD +DN+DED S C P + +C ++ +C+ S CD DC +
Sbjct: 3563 QCD-----SVDDCLDNSDEDPSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGD 3613
Query: 369 GEDE 372
DE
Sbjct: 3614 YSDE 3617
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 121/329 (36%), Gaps = 51/329 (15%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N S+ + A L+ W PA ++ +A G + P+V ++ WP+ L ID
Sbjct: 826 NPRSIVVHPAAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGLAID 877
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 878 WSTSRLYWVDAFFDKIEHSNLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FLTDW 930
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF-- 246
G + G + + I + L+ G++ PN C H CF
Sbjct: 931 RLGAIIRVRKSDGGDMTVVRRGISSIMHVKAYDADLQTGTNYCSQTTHPNGDCSHFCFPV 990
Query: 247 -NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
N Q C C L ++M C D + + QC + C + KC+P
Sbjct: 991 PNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSSSFPCN-NGKCVP 1039
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ CD DD DN+DE ++ C + C QC+ CD + D
Sbjct: 1040 SIFRCD-----GVDDCHDNSDEHQCGALNNT---CSSSAFTCVHGGQCIPGQWRCDKQND 1091
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C +G DE +C S C PT
Sbjct: 1092 CLDGSDE-------QNCPTRSPSSTCPPT 1113
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL S D+P +
Sbjct: 2146 NGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDIIARIHRD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|124487372|ref|NP_001074557.1| low-density lipoprotein receptor-related protein 2 precursor [Mus
musculus]
gi|160409939|sp|A2ARV4.1|LRP2_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330;
Short=gp330; AltName: Full=Megalin; Flags: Precursor
Length = 4660
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 162/329 (49%), Gaps = 32/329 (9%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C +L C S+ QCV + CD DC +G DE C Q +C G C S
Sbjct: 105 GTTCSSQQLTC-SNGQCVPIEYRCDHVSDCPDGSDERNCYYPTCD--QLTCANGACYNTS 161
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
KCD VDC D SDE N C C + QC S +CI ++CD + DC DN+D
Sbjct: 162 QKCDHKVDC-RDSSDEAN-CTTLCSQKEFQCG-SGECILRAYVCDHDNDCE-----DNSD 213
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLC 340
E + C Q C+ + +CI NW+CD + DC D+ DED + H+ C
Sbjct: 214 EHNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQRHHT--C 265
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
+P E C S +C+++ K CDG PDC GEDE G +C C L C ++C TP
Sbjct: 266 YPREWACPGSGRCISMDKVCDGVPDCPEGEDENNATSGRYCGTGL-CSILNCEYQCHQTP 324
Query: 396 RGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G CFCP G N N ++ C+D D+C I G CDQ C + + C C EGY L G+
Sbjct: 325 YGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILE-RGQH 383
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C + + ASIIFS+ D+ L+G
Sbjct: 384 CKSND--SFSAASIIFSNGRDLLVGDLHG 410
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 142/299 (47%), Gaps = 23/299 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
CHP + RC ++C++ CDG DC +G DE C CT QF C G CI ++
Sbjct: 1150 CHPTQFRC-PDHRCISPLYVCDGDKDCVDGSDEAG-CVLNCTSSQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-KDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDC-----IQGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI ++W+CD + DC D+ D D + C
Sbjct: 1262 DEHNGCVPKTCSPSHFLCDNGNCIYNSWVCDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGAM 399
++ +C + CV LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSSQWQCPGYSICVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CVCPIGYQLANDTKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVT 1432
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 159/367 (43%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C NE +C S ++C+ FCDG+ DC + DE C C+ QF C G+CI S
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISSS 2924
Query: 222 WKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS--- 272
W CDG DC + D + + C + + C S+ +CIP +W+CD + DC+
Sbjct: 2925 WVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCADAL 2984
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C + Q C +
Sbjct: 2985 DELQNCTMRACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQ-N 3043
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKF 359
+CI ++CDE+ DC D +DE ++ H C P++ RC + C+ +
Sbjct: 3044 GQCITKLYVCDEDNDCG-----DGSDEQ--EHLCHTPEPTCPPHQFRC-DNGHCIEMGTV 3095
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C H C+ T C C G +K CVD
Sbjct: 3096 CNHVDDCSDNSDEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDI 3155
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGKSC + EP ++FS+ IR
Sbjct: 3156 DECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LVFSNRYYIR 3212
Query: 476 RIHLNGS 482
+ ++G+
Sbjct: 3213 NLTIDGT 3219
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 69/356 (19%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIP 219
+ C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2821 ITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCVSPHRCIP 2880
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W CDG DC+ D SDEP+TC H C Q C + +CI +W+CD + DC D+
Sbjct: 2881 SYWFCDGEADCV-DSSDEPDTCGHSLNSCSANQFHCD-NGRCISSSWVCDGDNDCG--DM 2936
Query: 277 VDNTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D + C + + C S ++CIP +W+CD + DC+ + D+
Sbjct: 2937 SDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCA---------DALDEL 2987
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNNKADCENLKC 387
+ C E C ++ +C+ S CD + DC + DE P +++ C+N +C
Sbjct: 2988 QNCTMRACSTGEFSC-ANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQNGQC 3046
Query: 388 SHKC-----------SPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS------------ 424
K + +C P P D C+ G+
Sbjct: 3047 ITKLYVCDEDNDCGDGSDEQEHLCHTPEPTCPPHQFRCDNGHCIEMGTVCNHVDDCSDNS 3106
Query: 425 -----------------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
CD CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3107 DEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDIDECKETP 3162
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 151/376 (40%), Gaps = 78/376 (20%)
Query: 162 AVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V CHP+ + RCG+ + C+ L CDG DC + DE ECT +F C +CIP
Sbjct: 3718 SVPCHPSGDFRCGN-HHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCADQQCIPS 3776
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CD DC D SDE + + C QC S C+P CD DC +D +
Sbjct: 3777 RWVCDQENDC-GDNSDERDCEMKTCHPEHFQCT-SGHCVPKALACDGRADC-----LDAS 3829
Query: 281 DED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DE + C +C + CI W+CD E DC VD +DE+ F
Sbjct: 3830 DESACPTRFPNGTYCPAAMFECK-NHVCIQSFWICDGENDC-----VDGSDEEIHLCF-- 3881
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------- 374
N P RC +S +C+ + C+G DC +G DE
Sbjct: 3882 NVPCESPQRFRCDNS-RCIYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNG 3940
Query: 375 -------FCNNKADCENLK-----------------CSHKCSPTPRGA-MCFCPAGQNP- 408
C+N DC +L C C+ G +C C G P
Sbjct: 3941 NCVSQHYVCDNVDDCGDLSDETGCNLGENRTCAEKICEQNCTQLSNGGFICSCRPGFKPS 4000
Query: 409 --NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPA 464
+K C D +EC G C Q+C N+ SY C C +G+ G+ C A P
Sbjct: 4001 TLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAA----DGSPP 4056
Query: 465 SIIFSSTVDIRRIHLN 480
++ V IR+ +++
Sbjct: 4057 LLLLPENVRIRKYNIS 4072
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3513 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQA 3572
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + QCA +K+CIP W CD S DD +DN+
Sbjct: 3573 LCNARQDC-ADGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNS 3625
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE + +
Sbjct: 3626 DEDPSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIHECMTAAYN 3679
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3680 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 110/253 (43%), Gaps = 62/253 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ CD DC + DE P + C PGQF C G+CIP+SW
Sbjct: 3596 CEANEWQC-ANKRCIPEYWQCDSVDDCLDNSDEDPSHCASRTCRPGQFKCNNGRCIPQSW 3654
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNG--------QVQCALSKKCIPHNWLCDEEMDC--- 271
KCD DC D SDEP IH+C + C + +CIP +C+ DC
Sbjct: 3655 KCDVDNDC-GDYSDEP---IHECMTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDN 3710
Query: 272 --------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCAL 299
DD DN+DE+ +C + +CA
Sbjct: 3711 SDEQGCESVPCHPSGDFRCGNHHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCA- 3769
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
++CIP W+CD+E DC DN+DE CHP +C +S CV +
Sbjct: 3770 DQQCIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALA 3818
Query: 360 CDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 3819 CDGRADCLDASDE 3831
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +CV CD DC + DE C + +F+C G+CIP S+ C+G +C +
Sbjct: 2750 ANGRCVPYHYRCDFYNDCGDNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHD 2809
Query: 233 -DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQ 289
D SDE N C +C + C+P +LCD + DC D +DE+ + H
Sbjct: 2810 NDTSDEKNCPPITCQPDFAKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT 2864
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + QC +CIP W CD E DC VD++DE H+ C N+ C
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADC-----VDSSDE--PDTCGHSLNSCSANQFHC-D 2916
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ +C++ S CDG DC + DE + + CE CS
Sbjct: 2917 NGRCISSSWVCDGDNDCGDMSDE----DQRHHCELQNCS 2951
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 136/326 (41%), Gaps = 55/326 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +++ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGSNREVVISTAFH---SFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQQQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C A C QF+C G+CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGARCNQFQFTCLNGRCISQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 A-NGRCVPYHYRCDFYNDCG-----DNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPFCNNKADCEN--LKC--SHKCSPT 394
P C + +C H+C P+
Sbjct: 2856 NPIYCASHTCRSNEFQCVSPHRCIPS 2881
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C++ CD DC +G DE P A C F+C G+C+P ++CD + DC D
Sbjct: 2712 RCISQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCANGRCVPYHYRCDFYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE C
Sbjct: 2771 SDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPITCQPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S ++C+
Sbjct: 2828 AKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCVSPHRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCN--------NKADCENLKC 387
FCDG+ DC + DE C N+ C+N +C
Sbjct: 2880 PSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRC 2920
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 133/337 (39%), Gaps = 88/337 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N++ +++ I+WP+++ IDY D+LYW D+HL +E ++G H
Sbjct: 3348 IARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGH------HR 3401
Query: 168 NELRCGSSNQCVALSKFCD---------------GKPDCSN-----GEDEGPFCNAECTP 207
+ + G+ AL+ F D K D S PF P
Sbjct: 3402 HTVYDGTLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVLHP 3461
Query: 208 GQFSCGMGKCIPESWKCD----------GFV-DCLEDGSD----EPNTCIHQCFNGQVQC 252
+ C + C GF +C +D + C+ C + Q C
Sbjct: 3462 YRQPIMSNPCATNNGGCSHLCLIKAGGRGFTCECPDDFQTVQLRDRTLCMPMCSSTQFLC 3521
Query: 253 ALSKKCIPHNWLCDEEMDCS-----------------------------------TDDIV 277
++KCIP W CD + DCS D
Sbjct: 3522 GNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQALCNARQDCA 3581
Query: 278 DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DED + H+C + QCA +K+CIP W CD S DD +DN+DED S
Sbjct: 3582 DGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNSDEDPSHCASR 3635
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P + +C ++ +C+ S CD DC + DE
Sbjct: 3636 T---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 3668
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSGQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCGSGFFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
IP +W+CD++ DCS D DE + C + Q+ C+ + +C+P + CD DC
Sbjct: 81 IPSSWVCDQDKDCS-----DGADEQQNCPGTTCSSQQLTCS-NGQCVPIEYRCDHVSDCP 134
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 -----DGSDERNCYYPTCDQLTC--------ANGACYNTSQKCDHKVDCRDSSDEA 177
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS L + N+ WP+ L IDY N D +YW DS + +ES++ DG+ ++
Sbjct: 4211 KIESAWMNGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDRRLI 4269
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 121/329 (36%), Gaps = 51/329 (15%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N S+ + A L+ W PA ++ +A G + P+V ++ WP+ L ID
Sbjct: 826 NPRSIVVHPAAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGLAID 877
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 878 WSTSRLYWVDAFFDKIEHSNLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FLTDW 930
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF-- 246
G + G + + I + L+ G++ PN C H CF
Sbjct: 931 RLGAIIRVRKSDGGDMTVVRRGISSIMHVKAYDADLQTGTNYCSQTTHPNGDCSHFCFPV 990
Query: 247 -NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
N Q C C L ++M C D + + QC + C + KC+P
Sbjct: 991 PNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSSSFPCN-NGKCVP 1039
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ CD DD DN+DE ++ C + C QC+ CD + D
Sbjct: 1040 SIFRCD-----GVDDCHDNSDEHQCGALNNT---CSSSAFTCVHGGQCIPGQWRCDKQND 1091
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C +G DE +C S C PT
Sbjct: 1092 CLDGSDE-------QNCPTRSPSSTCPPT 1113
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL S D+P +
Sbjct: 2146 NGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDIIARIHRD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|114581572|ref|XP_515882.2| PREDICTED: low-density lipoprotein receptor-related protein 2
isoform 2 [Pan troglodytes]
Length = 4655
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C S +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-SGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESSLHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 142/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPTQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPAPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2949
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 154/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYIYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCLPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYRCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPTQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYRCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P + C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPTQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 109/273 (39%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGSGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D ++ H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESSLHDVHKCSPRE 270
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGMDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CGS +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGSG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESSLHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 105/277 (37%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R +V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVSIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGMDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 103/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ + CD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYRCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 69/162 (42%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N L F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYLTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|354490790|ref|XP_003507539.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Cricetulus griseus]
Length = 4544
Score = 148 bits (373), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCRDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDGK DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1150 SHTCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1209 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---PFIIFSNRHEIRRIDLH 1286
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 103/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C + +C + C H C PTP G CFC
Sbjct: 78 HNCLGTELCVPMSRLCNGVQDCMDGSDEGAHCRELRVNCSRMGCQHHCVPTPSGPTCFCN 137
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 138 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 196
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 197 DRPPVLLIANSQNILATYLSGA 218
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE + C++ C + + C ++ CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESISAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDE-GPFCNNKAD 381
+ C E +C +S+Q CVA + C+G+ DC +G DE G N +
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLN 2946
Query: 382 CENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
+ CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQLCVNTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 153/369 (41%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTTQNPHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCMRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT S++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 SSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 147/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 896 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 954
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 955 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1013
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C + QC L
Sbjct: 1014 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRL 1072
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1073 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCRDSARCISKAW 1124
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE L C SH C+ ++C P K C D
Sbjct: 1125 VCDGDSDCEDNSDE-------ENCEALACRPPSHTCANNT--SVCLPPDKLCDGKDDCGD 1175
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1176 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1222
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C NW+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPNWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 765 SVYRLERGAAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACPNSRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 130/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGAAGAPPTVTLLRSERPPIFEIRM 795
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 796 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 853
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ C S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 854 --QCQPGEFACPNS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 904
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 905 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 955
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 956 CDLDDDCGDRSDESASC 972
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R+DG+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLDGTDPVV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2086
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2354 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2413
Query: 164 L 164
+
Sbjct: 2414 I 2414
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGVQDCM-DGSDEGAHC 109
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2586
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2587 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A + CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPNWVCDGANDCGDYSDE 2685
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1407 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1459
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1460 YSARYDGSGHMEVLRGHEF 1478
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGAHC 109
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 83/202 (41%), Gaps = 33/202 (16%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + Q +C S +CIP +W CD + DC D D T + R G HT EF
Sbjct: 1014 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHT--DEF 1068
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE-IFPLDERLEKAGMHGENRSPL 121
R LC +R RC D ++S D + E + + + K G R
Sbjct: 1069 QCRLDGLCI-------PLRWRCDGDTDCMDSSDEKSCEGVTHVCDPNVKFGCRDSAR--C 1119
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG-SSNQCVA 180
++K + V D + D E + + A+ C P C +++ C+
Sbjct: 1120 ISK------AWVCDGDSD-----------CEDNSDEENCEALACRPPSHTCANNTSVCLP 1162
Query: 181 LSKFCDGKPDCSNGEDEGPFCN 202
K CDGK DC +G DEG C+
Sbjct: 1163 PDKLCDGKDDCGDGSDEGELCD 1184
>gi|417414461|gb|JAA53523.1| Putative low-density lipoprotein receptor, partial [Desmodus
rotundus]
Length = 2645
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 156/318 (49%), Gaps = 34/318 (10%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC + +
Sbjct: 988 RCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDE 1046
Query: 237 EPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKF 287
C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1047 THANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVT 1101
Query: 288 HQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
H C N + C S +CI W+CD + DC DN+DE+ + +++C P
Sbjct: 1102 HVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLVCRPPSHP 1151
Query: 347 CGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPA 404
C + ++ C+ K CDG DCS+G DEG C+ + N CSH CS P G +C CP
Sbjct: 1152 CANNTSVCLPPDKLCDGNDDCSDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCPL 1210
Query: 405 GQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1211 GMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK-- 1268
Query: 463 PASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1269 -PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C ++C L C H C PT G C+C +
Sbjct: 82 TELCVPMSRLCNGVQDCLDGSDEGPHCRELLSNCSQLGCQHHCVPTLNGPTCYCNSSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QTDGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +LNG+
Sbjct: 201 LLIANSQNILATYLNGA 217
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/347 (30%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C + + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHSDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLVCRPPSHPCANNT--SVCLPPDKLCDGNDDCSD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGTGGAPPTVTLLRSERPPIFEIRMYDA 797
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C G C+ ED+ G C A +C PG
Sbjct: 798 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPG 857
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 858 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 916
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 917 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 967
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 968 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 1011
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 1012 SHSCSST 1018
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC +D SD
Sbjct: 2577 RCVSNMLWCNGVDDCGDGSDEIPCNKTACGAGEFRCRDGTCIGNSSRCNQFVDC-DDASD 2635
Query: 237 EPN 239
E N
Sbjct: 2636 EMN 2638
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G + V+
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
P S C+G DCL DGSDE C + + Q C+P
Sbjct: 87 PMSRLCNGVQDCL-DGSDEGPHC-RELLSNCSQLGCQHHCVP 126
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANALTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPGQFSCGMGKCIPESWKCD 225
+E C ++ +C+ S CDG C + DE P +CN+ C C G+C+ C+
Sbjct: 2528 DEFEC-ANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCNNGRCVSNMLWCN 2586
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G DC DGSDE C G+ +C CI ++ C++ +DC
Sbjct: 2587 GVDDC-GDGSDEIPCNKTACGAGEFRCR-DGTCIGNSSRCNQFVDC 2630
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCLDGSDEGPHC 108
>gi|62988879|gb|AAY24266.1| unknown [Homo sapiens]
Length = 773
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 94/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|32816597|gb|AAP88586.1| glycoprotein receptor gp330/megalin precursor [Homo sapiens]
Length = 4655
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP +W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPSSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPL--------------DERLEKAGM 113
I +V + R+ A+++ W DL P + + +LE A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKLESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|32816595|gb|AAP88585.1| glycoprotein receptor gp330/megalin precursor [Homo sapiens]
Length = 4655
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRXWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP +W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPSSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKXESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 530 ESLSGEPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGI 589
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 590 QRKTVVHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|1809240|gb|AAB41649.1| gp330 precursor [Homo sapiens]
Length = 4655
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 93/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP +W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPSSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|126012573|ref|NP_004516.2| low-density lipoprotein receptor-related protein 2 precursor [Homo
sapiens]
gi|160332309|sp|P98164.3|LRP2_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330;
Short=gp330; AltName: Full=Megalin; Flags: Precursor
Length = 4655
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 94/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|119631685|gb|EAX11280.1| low density lipoprotein-related protein 2 [Homo sapiens]
Length = 4655
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 94/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPL--------------DERLEKAGM 113
I +V + R+ A+++ W DL P + + +LE A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKLESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
>gi|241848581|ref|XP_002415648.1| lipophorin receptor, putative [Ixodes scapularis]
gi|215509862|gb|EEC19315.1| lipophorin receptor, putative [Ixodes scapularis]
Length = 1001
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 155/328 (47%), Gaps = 31/328 (9%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPE 220
LC E RC + C++++ CD DC +G DEG F +A C F C G+C+
Sbjct: 6 LCGEAEFRC-INGGCISIAWRCDKDIDCVDGSDEGGCTAFTSAICLAEDFECRSGRCVGG 64
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+++C+G DC + +E C G+ +C CI +W CD + DC D++
Sbjct: 65 AYRCNGDNDCGDWSDEEGCEGKSACQEGEFRCE-DGFCINLDWKCDGDADCD-----DHS 118
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE QC + QC S KCI W CD + DCS DN+DED C
Sbjct: 119 DERDCAPRQCAPHEFQCH-SGKCIQAEWRCDGDFDCS-----DNSDED----GCGPEGAC 168
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNNKADC--ENLKCSHKCSPTPR 396
P RC C+ C+G PDC + DE C + C + C H+C T
Sbjct: 169 EPGHFRC-LDGTCIVERLVCNGVPDCPDRSDESQNTTCKSSTPCREDGFPCQHQCMATAT 227
Query: 397 GAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G C C G P+ C+D DEC +G+C Q+C NT S+ C C +GY LR D + C
Sbjct: 228 GQRCSCKEGYQLAPDGRSCLDVDECTYEGTCSQSCVNTVPSFQCLCKQGYRLRDDKRHCK 287
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A Q A +IF++ DIRRI ++ S
Sbjct: 288 A----QGPEAYVIFANGADIRRITMDKS 311
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 50/115 (43%), Gaps = 2/115 (1%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+G C E RC C+ L CDG DC + DE +C P +F C GK
Sbjct: 81 EGCEGKSACQEGEFRC-EDGFCINLDWKCDGDADCDDHSDERDCAPRQCAPHEFQCHSGK 139
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CI W+CDG DC ++ ++ C G +C L CI +C+ DC
Sbjct: 140 CIQAEWRCDGDFDCSDNSDEDGCGPEGACEPGHFRC-LDGTCIVERLVCNGVPDC 193
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 11/120 (9%)
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSP 120
E + RN+ + F ++V S R + W +I R+E A M G+NR
Sbjct: 688 ELDGRNRHVLF--WKDVDSPRAIALHYEKGVMFWTDWGNKI-----RIETADMDGDNRMN 740
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL----CHPNELRCGSSN 176
LV + WP L ID L W D+ + +ESV +DG + VL HP + S N
Sbjct: 741 LVHDGLGWPHGLAIDKQGSRLIWADAKQDVIESVGLDGKNRRVLVRDIAHPYGVAAFSGN 800
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+ G +R +V ++ WP+ L IDY D ++W D+ + +ES +DGS+ L
Sbjct: 432 RIERIYTDGSDRRSIVDTSLFWPNGLTIDYASDRIFWADAKHHQLESADLDGSNRKKL 489
>gi|363733420|ref|XP_427861.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Gallus gallus]
Length = 2327
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/298 (36%), Positives = 143/298 (47%), Gaps = 39/298 (13%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
LRC ++ +CV S CDG DC + DE +C+ +F C G+C+ + +CDG D
Sbjct: 1186 LRCDAATRCVPESWLCDGHADCLDHTDEQGCVPKKCSASEFPCRSGQCVALALRCDGDPD 1245
Query: 230 CLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
C DGSDE + + C G+V C+ S +C+P W CD DC D+TDE
Sbjct: 1246 C-RDGSDEEGCAVPRPLLCRPGEVACSHSGECVPEAWRCDGVADCR-----DSTDEQGCP 1299
Query: 287 F--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-- 342
QC Q C+ +CIP W CD E DCS D +DE CHP
Sbjct: 1300 LEDQQCGERQWGCSHGHECIPDAWRCDRESDCS-----DGSDE----------AGCHPTP 1344
Query: 343 ---NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
+E CG C+ S C G+ DC++G DEG C+ C+ CS C P+P+G
Sbjct: 1345 CLSHEYPCG-LGICLNASLVCSGQQDCADGSDEGGNCS--LPCQR-PCSQLCYPSPQGPR 1400
Query: 400 CFCPAGQN--PNKTQCVDADECLIDG--SCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
C+C G + CVD DEC G +C Q C N +Y C C GY L PDG C
Sbjct: 1401 CWCTPGYQLAEDGMSCVDVDECTEQGKRTCSQICLNAPGTYSCGCLSGYLLEPDGHIC 1458
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/247 (34%), Positives = 113/247 (45%), Gaps = 33/247 (13%)
Query: 167 PNELRCGSSNQ------CVALSKFCDGKPDCSNGEDEGPFCNAECT--PGQFSCGMGKCI 218
P C +S Q C+ +S CDG+ C +G DE C+A C P + C G+C+
Sbjct: 175 PTSPTCAASRQAACGDVCIPISWLCDGEQQCPDGTDE--LCDAPCGGDPHVWQCDDGRCV 232
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SW+CDG DC DGSDE C+ C ++QC + CIPH LCD DC D
Sbjct: 233 ASSWRCDGAADC-PDGSDE-QDCV--CGAKKLQCPGTHHCIPHWELCDRHQDCE-----D 283
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ C GQ QC ++ CI W C+ DD D++DED
Sbjct: 284 GWDEEGCPLQPCLPGQWQCR-NRVCIVAEWKCN-----GVDDCGDSSDED-------ICA 330
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C P +RC +C+ S C+ + DC +G DE C N C+ C+ T G
Sbjct: 331 PCPPGMVRC-DEGKCILESLMCNDEDDCLDGTDEPSTCGRSCFVRNGGCAESCTDTHWGV 389
Query: 399 MCFCPAG 405
C C +G
Sbjct: 390 QCSCGSG 396
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 111/269 (41%), Gaps = 69/269 (25%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPH 261
Q +CG CIP SW CDG C DG+DE + + QC +G +C+
Sbjct: 185 QAACG-DVCIPISWLCDGEQQC-PDGTDELCDAPCGGDPHVWQCDDG--------RCVAS 234
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD DC D +DE + C ++QC + CIPH LCD DC
Sbjct: 235 SWRCDGAADCP-----DGSDE---QDCVCGAKKLQCPGTHHCIPHWELCDRHQDC----- 281
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++ WD+ C P + +C + C+ C+G DC + DE
Sbjct: 282 ----EDGWDEE-GCPLQPCLPGQWQC-RNRVCIVAEWKCNGVDDCGDSSDE--------- 326
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECL---------------IDGSC 425
C+P P G M C G+ C D D+CL +G C
Sbjct: 327 -------DICAPCPPG-MVRCDEGKCILESLMCNDEDDCLDGTDEPSTCGRSCFVRNGGC 378
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
++CT+TH CSC G+ L+ DG+SC
Sbjct: 379 AESCTDTHWGVQCSCGSGWVLQADGQSCA 407
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMG-KCIP 219
+LC P E+ C S +CV + CDG DC + DE P + +C Q+ C G +CIP
Sbjct: 1261 LLCRPGEVACSHSGECVPEAWRCDGVADCRDSTDEQGCPLEDQQCGERQWGCSHGHECIP 1320
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
++W+CD DC DGSDE C + + C L C+ + +C + DC+ D
Sbjct: 1321 DAWRCDRESDC-SDGSDEAGCHPTPCLSHEYPCGLG-ICLNASLVCSGQQDCA-----DG 1373
Query: 280 TDE 282
+DE
Sbjct: 1374 SDE 1376
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C +L+C ++ C+ + CD DC +G DE C PGQ+ C CI WK
Sbjct: 254 VCGAKKLQCPGTHHCIPHWELCDRHQDCEDGWDEEGCPLQPCLPGQWQCRNRVCIVAEWK 313
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D SDE + C C G V+C KCI + +C++E DC +D TDE
Sbjct: 314 CNGVDDC-GDSSDE-DICA-PCPPGMVRCD-EGKCILESLMCNDEDDC-----LDGTDEP 364
Query: 284 WDKFHQCFNGQVQCALS 300
CF CA S
Sbjct: 365 STCGRSCFVRNGGCAES 381
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ AGM G NR L +++ P L +DY LYW + ++E++RVDGS P
Sbjct: 548 IAAAGMDGSNRQELTVVSMEEPVGLSLDYVAGRLYWISEYKESIETLRVDGSGRHSF--P 605
Query: 168 NELRCGSSNQCVALSKF 184
LR S + + L+ F
Sbjct: 606 AVLR--SHTEPLGLAVF 620
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL +A M G + L+ + + WP++L +D L+W D L +V S +DG+ VL
Sbjct: 1608 RLMEATMDGRRQRVLLAQGLGWPTALALDLPTSRLFWLDEKLGSVGSTHLDGTDVKVL 1665
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C ++C+ + CD + DCS+G DE C ++ CG+G C+ S C
Sbjct: 1305 CGERQWGCSHGHECIPDAWRCDRESDCSDGSDEAGCHPTPCLSHEYPCGLGICLNASLVC 1364
Query: 225 DGFVDCLEDGSDEPNTCIHQC 245
G DC DGSDE C C
Sbjct: 1365 SGQQDC-ADGSDEGGNCSLPC 1384
>gi|354467110|ref|XP_003496014.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Cricetulus griseus]
Length = 4675
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/331 (35%), Positives = 156/331 (47%), Gaps = 36/331 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C ++ C S+ QC+ CD DCS+G DE C Q +C G C S
Sbjct: 122 GTTCSSQQMAC-SNGQCIPREYRCDHVSDCSDGSDERNCYYPTCD--QLTCANGACYNTS 178
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
KCD VDC D SDE N C C + + QC S +CI ++CD + DC DN+D
Sbjct: 179 QKCDQKVDC-RDASDEAN-CTTHCSHKEFQCG-SGECILRAYVCDHDNDCE-----DNSD 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW----DKYFSHNA 337
E + C C+ + +CI NW+CD E DC D+ DED +Y +
Sbjct: 231 EHNCTYDTCGGHHFTCS-NGQCINQNWVCDGEDDCQ-----DSGDEDGCESNQRYHT--- 281
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCSP 393
C+P E C S +C+ + K CDG PDC GEDE + C L C ++C
Sbjct: 282 --CYPREWHCPGSGRCIPIDKVCDGVPDCPGGEDETNTTTGRQCGTGICSVLNCEYQCHQ 339
Query: 394 TPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
TP G CFCP N C+D D+C I G+CDQ C N + C C EGY L G
Sbjct: 340 TPYGGECFCPPSHIINVNDSRTCIDFDDCQIWGTCDQKCENRQGRHQCLCEEGYILE-RG 398
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ C A + ASIIFS+ D+ L+G
Sbjct: 399 QHCKANS--SFSVASIIFSNGRDLLIGDLHG 427
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 139/300 (46%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC +G DE C CT QF C G CI ++
Sbjct: 1166 CQPTQFRC-PDHRCISPFYVCDGDKDCVDGSDEAG-CVLNCTSSQFKCADGSACIGSRYR 1223
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP+ W CD DC +D +
Sbjct: 1224 CDGVYDC-KDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDRHPDC-----IDGS 1277
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE + C C + C+ W+CD + DC DN+DE K
Sbjct: 1278 DEHNGCVYKTCSPSHFLCD-NGNCVYRPWVCDGDNDCR-----DNSDE---KDCPAPPFR 1328
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGA 398
C +C N C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1329 CPFRHWQCPGYNICINLSALCDGNFDCPNGTDESPLCNQDSCLHYNGGCTHQCVQGPFGA 1388
Query: 399 MCFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP+G Q N T+ C D DEC G C Q C N ++ C+C YTL D ++C
Sbjct: 1389 TCVCPSGYQLANDTKTCEDIDECDSPGFCSQHCVNMRGTFRCTCDPEYTLEGDRRTCKVT 1448
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 112/366 (30%), Positives = 159/366 (43%), Gaps = 61/366 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C +E +C S +C+ FCDG+ DC++ DE C CT QF C G+CI +
Sbjct: 2881 CSSSEFQCVSPRRCIPNIWFCDGEADCADQSDEPSSCAPTVNTCTANQFRCDNGRCISST 2940
Query: 222 WKCDGFVDCLE-DGSDEPNTC-IHQCFNGQVQC----ALSKKCIPHNWLCDEEMDCS--- 272
W CDG DC + D+ + C I C Q C +++CIP +W+CD + DCS
Sbjct: 2941 WVCDGDNDCGDMSDEDQRHQCEIRNCSASQFACRNDRTSNRRCIPLSWVCDGDADCSDGL 3000
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE + C + Q C +
Sbjct: 3001 DELQNCTRRTCSAGEFTCANGRCIMQSFRCDRRDDCGDYSDERGCSYPPCRDDQFTCQ-N 3059
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKF 359
+CI ++CDE+ DC D +DE ++ H C P++ RC + C+ + K
Sbjct: 3060 GRCISKFFVCDEDNDCG-----DGSDEQ--EHLCHTPEPTCPPHQFRC-DNGHCIEMGKV 3111
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DC + DE G N D +C H C+ T C C G +K CVD
Sbjct: 3112 CNHVDDCLDNSDEKGCGINECQDTSISRCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDI 3171
Query: 417 DECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGK+C + EP +IFS+ +R
Sbjct: 3172 DECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKTCRQNS--NIEPY-LIFSNRYYLR 3228
Query: 476 RIHLNG 481
+ +G
Sbjct: 3229 NLTTDG 3234
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 159/403 (39%), Gaps = 107/403 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
E C ++ +C+ + C+G DC + DE + C PG F C +CIP WKCD +
Sbjct: 3701 EFSCKTNYRCIPKWEVCNGVDDCRDNSDEQGCESVPCNPGDFRCRNHRCIPLRWKCDAYD 3760
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
DC D SDE N +C + +CA +++CIP W+CD+E DC DN+DE +
Sbjct: 3761 DC-GDSSDEENCVPRECSESEFRCA-NQQCIPSRWVCDQENDCG-----DNSDERDCEMK 3813
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------------------- 316
C QC S C+P++ CD DC
Sbjct: 3814 TCHPEHFQCT-SGHCVPNSLTCDGRADCLDASDESSCPTRFPNGTYCPAAMFECKNHVCI 3872
Query: 317 -------STDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSN 368
+D VD +DE+ F+ V C P+ RC +S +C+ + C+G DC +
Sbjct: 3873 QSFWICDGDNDCVDGSDEELHLCFN---VPCEPPHRFRCDNS-RCIYGHQLCNGVDDCGD 3928
Query: 369 GEDEGP----------------------------FCNNKADCENLK-------------- 386
G DE C+N DC +L
Sbjct: 3929 GTDEREEHCRKPTHKPCTQTEYKCGNGNCISQHYVCDNVDDCGDLSDESGCNLGENRTCA 3988
Query: 387 ---CSHKCSPTPRGA-MCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
C C+ G +C C G +K C D +EC G C Q+C N+ SY C
Sbjct: 3989 ENICEQNCTQLSNGGFICSCIPGFKSSTLDKNSCQDINECEQFGICPQSCRNSKGSYECL 4048
Query: 440 CTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C +G+ G+ C A +P ++ V IR+ +++
Sbjct: 4049 CADGFKSMDSHFGERCAA----DGDPPLLLLPENVRIRKYNVS 4087
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 138/338 (40%), Gaps = 90/338 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N S +++ I WP+++ IDY D+LYW D+H
Sbjct: 3364 IARTGMDGTNMSVIISTKITWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 3423
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNE---L 170
TVE + DGS+ VL HP +
Sbjct: 3424 TLPHPYAITIFEDTVYWTDWNTRTVEKGNKYDGSNRVVLVNTTHRPFDIHVYHPYRQPIV 3483
Query: 171 RCGSSNQCVALSKFCDGKPD-----CSNGED-------EGPFCNAECTPGQFSCGMG-KC 217
N S C K C+ +D + C C+ QF CG KC
Sbjct: 3484 NNPCGNNNGGCSHLCLIKAGGKGFTCACPDDFQTVQLRDRTLCMPMCSSTQFLCGNNEKC 3543
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDE + C H+ C GQ QC C LC+ DC+
Sbjct: 3544 IPIWWKCDGQKDC-ADGSDESDLCPHRFCRLGQFQCR-DGNCTSPQALCNAHQDCA---- 3597
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD DC DN+DED S
Sbjct: 3598 -DGSDEDRVLCEHHRCESNEWQCA-NKRCIPEAWQCDSVNDCQ-----DNSDEDSSHCAS 3650
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P + RC ++ +C+ S CD DC + DE
Sbjct: 3651 RT---CKPGQFRC-NNGRCIPQSWKCDVDNDCGDYSDE 3684
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 33/243 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DC++G DE C + C GQF C G C
Sbjct: 3529 MCSSTQFLCGNNEKCIPIWWKCDGQKDCADGSDESDLCPHRFCRLGQFQCRDGNCTSPQA 3588
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP W CD DC DN+
Sbjct: 3589 LCNAHQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPEAWQCDSVNDCQ-----DNS 3641
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE + +
Sbjct: 3642 DEDSSHCASRTCKPGQFRCN-NGRCIPQSWKCDVDNDCG-----DYSDEPVQECMTAAYN 3695
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--------SHK 390
+ E C ++ +C+ + C+G DC + DE CE++ C +H+
Sbjct: 3696 CDNHTEFSCKTNYRCIPKWEVCNGVDDCRDNSDE-------QGCESVPCNPGDFRCRNHR 3748
Query: 391 CSP 393
C P
Sbjct: 3749 CIP 3751
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 112/249 (44%), Gaps = 55/249 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ + CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3612 CESNEWQC-ANKRCIPEAWQCDSVNDCQDNSDEDSSHCASRTCKPGQFRCNNGRCIPQSW 3670
Query: 223 KCDGFVDCLEDGSDEP-NTCIHQCFN----GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP C+ +N + C + +CIP +C+ DC
Sbjct: 3671 KCDVDNDC-GDYSDEPVQECMTAAYNCDNHTEFSCKTNYRCIPKWEVCNGVDDCRDNSDE 3729
Query: 272 ----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+ DD D++DE+ +C + +CA +++C
Sbjct: 3730 QGCESVPCNPGDFRCRNHRCIPLRWKCDAYDDCGDSSDEENCVPRECSESEFRCA-NQQC 3788
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP W+CD+E DC DN+DE CHP +C +S CV S CDG+
Sbjct: 3789 IPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPNSLTCDGR 3837
Query: 364 PDCSNGEDE 372
DC + DE
Sbjct: 3838 ADCLDASDE 3846
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 132/347 (38%), Gaps = 74/347 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCI 218
C P+ C QC+ CD DC +G DE P+ C F+C CI
Sbjct: 1083 CSPSAFTCVHGGQCIPSQWCCDKHNDCIDGSDEQNCPTSAPY---SCPSTSFTCDNHMCI 1139
Query: 219 PESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
P +W CD DCL DGSDE N C Q +C +CI ++CD + DC V
Sbjct: 1140 PRNWVCDTDNDCL-DGSDEKNCEASGTCQPTQFRCP-DHRCISPFYVCDGDKDC-----V 1192
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE + C + Q +CA CI + CD DC DN+DE +
Sbjct: 1193 DGSDEAGCVLN-CTSSQFKCADGSACIGSRYRCDGVYDCK-----DNSDEAGCP--TRPP 1244
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----------------- 380
+CHP+E +C C+ + CD PDC +G DE C K
Sbjct: 1245 GMCHPDEFQCQGDGTCIPNTWECDRHPDCIDGSDEHNGCVYKTCSPSHFLCDNGNCVYRP 1304
Query: 381 -------DCEN-----------LKCSHKCSPTPRGAMCF-----------CPAGQNPNKT 411
DC + +C + P +C CP G +++
Sbjct: 1305 WVCDGDNDCRDNSDEKDCPAPPFRCPFRHWQCPGYNICINLSALCDGNFDCPNGT--DES 1362
Query: 412 QCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ D CL +G C C C C GY L D K+C ++
Sbjct: 1363 PLCNQDSCLHYNGGCTHQCVQGPFGATCVCPSGYQLANDTKTCEDID 1409
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 90/188 (47%), Gaps = 29/188 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC G F C G CIP +W+CDG DCL+D +DE H C G C + CI +W
Sbjct: 44 ECGSGNFRCDNGHCIPAAWRCDGTRDCLDD-TDEIGCPPHSCGTGFFLCPVEGTCISRSW 102
Query: 264 LCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+CD+E DCS D DE + C + Q+ C+ + +CIP + CD DCS
Sbjct: 103 VCDQEKDCS-----DGADEHQNCAGTTCSSQQMACS-NGQCIPREYRCDHVSDCS----- 151
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE Y + + + C ++ C S+ CD K DC + DE A+C
Sbjct: 152 DGSDERNCYYPTCDQLTC--------ANGACYNTSQKCDQKVDCRDASDE-------ANC 196
Query: 383 ENLKCSHK 390
CSHK
Sbjct: 197 -TTHCSHK 203
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ +S + +YW D + + DGS +
Sbjct: 2590 QKIERSSLTGTNREVIVSTAF---NSFGLTVYGQYIYWTDYFTRKIYRANKYDGSDLIAM 2646
Query: 165 -----CHPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P + NQ S CD CS+ GP
Sbjct: 2647 TTRLPVQPRGISRVLKNQPQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDN 2706
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
+C + C+ QF+C G+CI E WKCD DC D SDE T H C + C
Sbjct: 2707 KYCIMDTGSRCSQSQFTCLNGRCIIEDWKCDNDNDC-GDNSDELQTLCAFHTCPSTAFTC 2765
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+P+ + CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2766 A-NGRCVPYRYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLDFVCNG 2819
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C+ + D + C P+ +C ++N CV + CDG DC + DE
Sbjct: 2820 INNCNDNGTSDEKN--------CPPRTCLPSFTKCQTTNICVPRAFLCDGDNDCGDMSDE 2871
Query: 373 GPF 375
P
Sbjct: 2872 NPI 2874
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I + S R+ A ++ W DL P ++ +L E A M
Sbjct: 4173 IYWSDAKSQRIEVATLDGRYRKWLITTDLDQPGAIVVNPKLGLMFWTDQGKQPKIESAWM 4232
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+RS LV++++ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4233 NGEHRSVLVSEDLGWPNGLSIDYLNDDRIYWSDSKEDVIETIKYDGTDRRLI 4284
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 106/290 (36%), Gaps = 46/290 (15%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA ++ +A G + P+V ++ WP+ L ID++ LYW D+ + +E
Sbjct: 861 WQRPA--------KIMRAWSDGSHIMPIVNSSLGWPNGLAIDWSASRLYWVDAFFDKIEH 912
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
DG L H +++ L+ F D G + G
Sbjct: 913 STFDGLDRKRLGHIDQM-----THPFGLTIFKDNL--FLTDWRLGALIRVRKSDGGDMTV 965
Query: 214 MGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCIPHNW 263
+ I + L+ GS+ PN C H C+ N Q C C
Sbjct: 966 IRSGIESIMHVKAYDVDLQTGSNYCREPTHPNGDCSHFCYPVPNFQRVCG----CPYGMK 1021
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
L ++ C D + E F C NG KC+P ++ CD DD
Sbjct: 1022 LQRDQRTCEGDPASEPPTEQCGSFSFACDNG--------KCVPSSFRCD-----GMDDCH 1068
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE F++ C P+ C QC+ CD DC +G DE
Sbjct: 1069 DNSDEHQCGAFNNT---CSPSAFTCVHGGQCIPSQWCCDKHNDCIDGSDE 1115
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1595 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHSRRQVIA 1654
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1655 SDLVLRHPHAL 1665
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 553 KVERAFMDGSNRKDLVKTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGVQRMTVAR 612
Query: 167 PNEL 170
L
Sbjct: 613 GGSL 616
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL S D+P +
Sbjct: 2162 NGIRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVSVDMPRHIVVDPKSRYL 2221
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2222 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHSTGYIYWVDDSLDIIARIHLD 2281
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2282 GGESQVV 2288
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIPES 221
P+ RC +S +C+ + C+G DC +G DE + CT ++ CG G CI +
Sbjct: 3903 PHRFRCDNS-RCIYGHQLCNGVDDCGDGTDEREEHCRKPTHKPCTQTEYKCGNGNCISQH 3961
Query: 222 WKCDGFVDCLEDGSDE 237
+ CD DC D SDE
Sbjct: 3962 YVCDNVDDC-GDLSDE 3976
>gi|198414835|ref|XP_002125195.1| PREDICTED: similar to low density lipoprotein receptor-related
protein 4, partial [Ciona intestinalis]
Length = 1166
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 120/325 (36%), Positives = 163/325 (50%), Gaps = 40/325 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+E+ G + C+ CD + DC NG DE C+ CT Q+ CG G+CI CDG
Sbjct: 215 SEVGHGQLDFCIPFEYVCDQELDCDNGIDERN-CSHPCTDEQYRCGNGQCIGLHNHCDGQ 273
Query: 228 VDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC DG+DE N +C G+ +C S CI W CD + DC+ D +DE +
Sbjct: 274 DDC-GDGTDEINCPEYEECIYGEFKCK-SGMCISEAWRCDGDSDCN-----DGSDEQNCQ 326
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + Q +C SK+CI +W CD E DCS D +DE C + R
Sbjct: 327 PLGCNDDQFECFTSKRCIRISWRCDGEHDCS-----DQSDE-------IECDTCGSGKHR 374
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGP--FCN-------NKADCE--NLKCSHKCSPTP 395
C ++ QC+ + K CDG DC + DE P CN N C N C H C +
Sbjct: 375 C-NNGQCIGMHKVCDGVVDCLDSSDESPRRACNGSNMLPTNFTSCADNNGGCEHTCRESL 433
Query: 396 RG-AMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G A C C G +P+ + C+D +EC + SC Q C NT S+VCSC GY LRPD ++
Sbjct: 434 SGRAQCICRKGFELSPDLSSCIDLNECNEEASCSQVCNNTIGSFVCSCLHGYILRPDSRT 493
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRI 477
C A EPA ++F++ +DIR+I
Sbjct: 494 CKASG---PEPA-LLFTNRIDIRKI 514
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/265 (30%), Positives = 110/265 (41%), Gaps = 70/265 (26%)
Query: 165 CHPNELRCGSSNQC--VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C + C SN+C + ++ CDG DC + DE C P F C GKCI W
Sbjct: 31 CKRKQFACSVSNKCTCIPVAWKCDGDTDCGDASDEMDCVIPTCRPSSFQCDNGKCIMAEW 90
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-----TD--- 274
KCDG DC +D SDE + I C + S C+P W CD + DCS TD
Sbjct: 91 KCDGENDCGDD-SDEVSCPIQPCDESTEKTCGSGDCVPKRWWCDGDEDCSDGSDETDCNR 149
Query: 275 --------------------------DIVDNTDEDWDK------------FHQCFNGQVQ 296
D D +DE+ ++ F C + +
Sbjct: 150 RTCGGTEYACTSGECVSSAFNCDGDFDCRDGSDEECEEPADPDVIPSNSNFTACKDEEFS 209
Query: 297 CALSKK---------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
CA S CIP ++CD+E+DC D+ +D ++ SH C + RC
Sbjct: 210 CAGSDSEVGHGQLDFCIPFEYVCDQELDC--DNGID------ERNCSHP---CTDEQYRC 258
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
G + QC+ L CDG+ DC +G DE
Sbjct: 259 G-NGQCIGLHNHCDGQDDCGDGTDE 282
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G NR+ LV+ + WP+ + IDY D++YW D+ T+E+ + G+ VL
Sbjct: 943 KIERAGMDGTNRTTLVSTGLTWPNGVAIDYTSDMIYWTDAGAKTIETCDLHGAQRRVL 1000
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAV-- 163
RLE A M G R + ++N+ WP+ L IDY ++ +YW D+ + +E +DG AV
Sbjct: 639 RLESAAMDGSQRHTVASRNLHWPNGLAIDYTRNHIYWADAKYHIIEKANLDGGDRRAVIS 698
Query: 164 --LCHP 167
L HP
Sbjct: 699 RGLLHP 704
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A G +V+ ++ P+ L ID+ + +YW ++ +N +E +DGS VL
Sbjct: 857 ISRAEWDGSQEKVIVSSSLDSPAGLAIDWITNKIYWTEAGINRIEVALLDGSMRCVL 913
>gi|194379030|dbj|BAG58066.1| unnamed protein product [Homo sapiens]
Length = 1225
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 159/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPNKT---QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N+ CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINRNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILG-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1012 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCIGVTNR 1069
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1070 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC----LYGSD 1124
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C + C + CI WLCD + DC D +DE K C
Sbjct: 1125 EHNACVPKTCPSSYFHCD-NGNCIHRAWLCDRDNDCG-----DMSDE---KDCPTQPFRC 1175
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ +C N CV LS CDG DC NG DE P C+ D
Sbjct: 1176 PSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCSKFPD 1216
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
+ +CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+
Sbjct: 898 NGRCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV- 956
Query: 233 DGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFH 288
DGSDE N H C + Q C + +CI NW+CD + DC D +DE + +
Sbjct: 957 DGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTE 1010
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C Q C + +CI +++CD + DC VD +DE + C ++ +C
Sbjct: 1011 TCQPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE------VGCVLNCTASQFKCA 1058
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEG 373
S ++C+ ++ CDG DCS+ DE
Sbjct: 1059 SGDKCIGVTNRCDGVFDCSDNSDEA 1083
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 888 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 945
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 946 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 998
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 999 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1043
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 107/273 (39%), Gaps = 63/273 (23%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP +W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPSSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNK 410
C++ DC++ H C+ PT G CP+G+ +
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQ 237
Query: 411 TQCVDA-DECLIDGSCDQTCTNTHLSYVCSCTE 442
D D+C +G D + H + CS E
Sbjct: 238 NWVCDGEDDCKDNGDEDGCESGPHDVHKCSPRE 270
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 124/344 (36%), Gaps = 51/344 (14%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP--------APEIFP 103
+ +LA ++ +N +++S +RL ++ + P A +F
Sbjct: 646 VENVESLAFDWISKNLYWTDSHYKSISVMRLADKTRRTVVQYLNNPRSVVVHPFAGYLFF 705
Query: 104 LD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
D ++ +A G + P++ + WP+ L ID+ LYW D++ + +E DG
Sbjct: 706 TDWFRPAKIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFDKIEHSTFDGL 765
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
L H ++ L+ F G+ G G + I
Sbjct: 766 DRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGGEMTVIRSGIA 818
Query: 220 ESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCIPHNWLCDEEM 269
+ ++ GS+ PN C H CF N Q C C L +
Sbjct: 819 YILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CPYGMRLASNHL 874
Query: 270 DCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
C D + E F C NG +C+P+ +LCD DD DN+DE
Sbjct: 875 TCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GVDDCHDNSDEQ 921
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C + CG +C+ CD + DC +G DE
Sbjct: 922 LCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 961
>gi|338726177|ref|XP_001916726.2| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1-like [Equus caballus]
Length = 4487
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPNSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CT-----DGSDESSECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 103/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + C +L C H C PT G C+C
Sbjct: 77 HNCLGTELCVHMSRLCNGVQDCVDGSDEGPHCRELRGHCSHLGCQHHCVPTLNGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 137 NTFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D PA ++ +++ +I +L+G+
Sbjct: 196 DRPAVLLIANSQNILATYLSGT 217
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 48/323 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGXWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGK---PDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+C PN RC + C+ + + CDG P ++ C ++A +C T
Sbjct: 3694 VCPPNRPFRCKNDRVCLXIGRQCDGTDNYPKLTSCATNVSICGDEA---------RCVRT 3744
Query: 395 PRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLR 447
A C C +G + P + C D +ECL G+C Q C NT S++CSC + T +
Sbjct: 3745 ENAAYCACRSGFHTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHNTCK 3804
Query: 448 PDGKSCTAVNVPQDEPASIIFSS 470
+G + + D +F S
Sbjct: 3805 AEGSEYQVLYIADDNEIRSLFPS 3827
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 146/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLEKA M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLEKAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGTAGAPPTVTLLRSERPPIFEIRMYDA 797
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C+ G C+ ED+ G C A +C PG
Sbjct: 798 QQQQVGTNKCRVNNGGCNSLCLATPGSRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPG 857
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E W+CDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 858 EFACANSRCIQERWRCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 916
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 917 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 967
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 968 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 1011
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 1012 SHSCSST 1018
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNLLWCNGADDCGDGSDEIPCNKTACGAGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDETNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+
Sbjct: 3968 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4020
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G +R LV +I WP+ + +DY +YWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTDRVVLVNVSISWPNGISVDYQDGKIYWCDARTDKIERIDLETGEN 2086
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 74/170 (43%), Gaps = 19/170 (11%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNLLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD- 326
DC D +DE C G+ +C CI ++ C++ +DC +D D T+
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGAGEFRCR-DGTCIGNSSRCNQFVDC--EDASDETNC 2639
Query: 327 --EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2640 SATDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVHMSRLCNGVQDCVDGSDEGPHC 108
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S C+G DC+ DGSDE C
Sbjct: 87 HMSRLCNGVQDCV-DGSDEGPHC 108
>gi|195332400|ref|XP_002032886.1| GM21016 [Drosophila sechellia]
gi|194124856|gb|EDW46899.1| GM21016 [Drosophila sechellia]
Length = 4717
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/230 (40%), Positives = 125/230 (54%), Gaps = 21/230 (9%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CIP W CD + DC D +DE + +C GQ +C +S+ CIP+NWLCD E D
Sbjct: 51 CIPMRWKCDSKADCP-----DMSDEGSECAGAPKCNEGQFRCGVSRHCIPNNWLCDGEFD 105
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C D D + + + C E +C + + C+ LS+FCDG+ DC N E +
Sbjct: 106 CGKGDTSDELNCP-----NGDTPKCRAFEGQCLNGD-CLELSRFCDGRWDCDNDELQ--- 156
Query: 376 CNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTN 431
C+ + A C L CS C TP+GA C+CP Q P N T+CVD DEC G+CDQ C N
Sbjct: 157 CDKQNAACAALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRN 216
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
T SY CSC GY + G C A+NVP EP ++IF S ++ + NG
Sbjct: 217 TPGSYECSCVSGYA-KTKGNRCRAINVPPTEPTTLIFLSRDGVQSVGTNG 265
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 161/379 (42%), Gaps = 71/379 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
+H ++ C P + RC S N C+A S CDG+ D +G DE C +EC QF+C +
Sbjct: 2756 ANHTSLSCDPGQFRCASGN-CIAGSWHCDGERDRPDGSDE-INCRSECRHNQFACDKSR- 2812
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP SW+CDG DC EDGSDE C ++ C QC S +CIP W+CD E DC + +
Sbjct: 2813 IPASWQCDGKSDC-EDGSDEGPQCPNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GL 2870
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDE 327
D E D+ QC S CI +++CD + DC DD +
Sbjct: 2871 GDEGSE--DEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVP 2928
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------- 374
+ + L H + C+ ++ CDGKPDC +G DE
Sbjct: 2929 AFQPHSCPGGSLMHQCQ-----DGLCIFKNQTCDGKPDCGDGSDETSSLCAHTRGCNGTD 2983
Query: 375 --------------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAG 405
C+ + DC + C H+C G C C G
Sbjct: 2984 DFRCKNGACIHADLLCDRRNDCADFSDEELCNVNECLIPDICEHECEDKVVGYQCHCRPG 3043
Query: 406 QN--PNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
P C D DEC C QTC NT+ SY C C +GY L D +C A + +
Sbjct: 3044 YKVLPRSPHLCTDIDECDEQQPCSQTCINTYGSYKCLCAKGYALV-DHHTCKATS---NV 3099
Query: 463 PASIIFSSTVDIRRIHLNG 481
+IFS+ IR++ + G
Sbjct: 3100 SMELIFSNRYYIRQVDMTG 3118
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 149/340 (43%), Gaps = 42/340 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG--QFSCGMGKCIPESW 222
C+ NE C S +C+ L+ DG DC +D +F C G+C +
Sbjct: 1011 CNSNEFTCQKSGRCIQLTWVNDGVVDCGPDDDSDEMSETIFASKCPEFDCNNGRCRQFAD 1070
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG +C + +DE C +C +G+ C C +CD DC VD +DE
Sbjct: 1071 VCDGIDNC-GNNADEME-CEQECEHGEKYCR-PIGCYGEMHMCDGIHDC-----VDFSDE 1122
Query: 283 --------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
W + +C + C +CIP CD C D TDE
Sbjct: 1123 ANCNQTKSDNHPVTGWKELGECAPLEFACMDPFECIPDFLRCDGIPHC-----FDKTDEL 1177
Query: 328 -----DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ ++ + V+C HP+ L CG S QCV + + CDGK DC + DEG C +K
Sbjct: 1178 NCSHINTSRFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLC 1236
Query: 382 CENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
+CSH+C TP G +C CP PN +C C +C Q C ++ Y C
Sbjct: 1237 DRGHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCR 1296
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C +G+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1297 CLDGFDLGFDRFTCKS--TAPDEPY-VIFTNRQDIKGINL 1333
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 99/213 (46%), Gaps = 17/213 (7%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ CG+S C+ CDG PDC +G DE + C PGQF C G CI SW CDG
Sbjct: 2725 VHCGNSTMCIMPRWRCDGDPDCPDGTDELDCANHTSLSCDPGQFRCASGNCIAGSWHCDG 2784
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD- 285
D DGSDE N C +C + Q C S+ IP +W CD + DC D +DE
Sbjct: 2785 ERD-RPDGSDEIN-CRSECRHNQFACDKSR--IPASWQCDGKSDCE-----DGSDEGPQC 2835
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPN 343
C QC S +CIP W+CD E DC + + D ED A + C P
Sbjct: 2836 PNRPCRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GLGDEGSEDEGPQCGGVAHIPDCPPP 2894
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +S C+ CDG DC G+DE C
Sbjct: 2895 AHLC-TSGLCIDSHYVCDGDEDCPGGDDEYEGC 2926
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N ++CG SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3491 CFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTPLVCKKDQFQCGNNRCMPF 3550
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD++ DC +
Sbjct: 3551 VWVCDGDIDC-PDKSDEANCDNVSCGPNDFQCD-SGRCIPLAWRCDDDHDCPNGE----- 3603
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF+ + C + KCIP W CD E DC D +DE +
Sbjct: 3604 ----DEPASCFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3649
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ + CDG+ C + DE
Sbjct: 3650 CQMRNCSESEFRCGTG-KCIKHNYRCDGEIHCDDNSDE 3686
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C ++ +CG+ N+C+ CDG DC + DE N C P F C G+CIP +W
Sbjct: 3533 LVCKKDQFQCGN-NRCMPFVWVCDGDIDCPDKSDEANCDNVSCGPNDFQCDSGRCIPLAW 3591
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP +C F+ + C + KCIP W CD E DC
Sbjct: 3592 RCDDDHDC-PNGEDEPASC----FSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3642
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT--DEDWDKY 332
D +DE + C + +C + KCI HN+ CD E+ C ++D+I N E+ K
Sbjct: 3643 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDNSDEINCNITCKENQFKC 3700
Query: 333 FSHNAVL----------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ N + CH + CG+ +C+ CDG DC +G
Sbjct: 3701 AAFNTCINKQYKCDGDDDCPDGSDEVNCTCHSDHFSCGNG-KCIMSRWKCDGWDDCLDGS 3759
Query: 371 DE 372
DE
Sbjct: 3760 DE 3761
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 152/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3241 IGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3300
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRC--- 172
YW D ++E + N + P +LR
Sbjct: 3301 SINPLLNLHHIFAIAVWEGRIYWSDWETKSIEYCSIFNGQNCTTLITTIHRPMDLRVFHP 3360
Query: 173 ------GSSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+A S C P+ C D+G C A CT F C
Sbjct: 3361 YRQQQPMSGNPCLAANCSTLCVLSPEEPYYKCMCPTNFILADDGRTCRANCTAAHFECVN 3420
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP TC C GQ QCA +KKC + LCD C
Sbjct: 3421 TYKCIPFYWRCDTQDDC-GDGSDEPETCPPFHCEPGQYQCA-NKKCTHPSNLCDGINQCG 3478
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF+ ++C +
Sbjct: 3479 -----DGSDELNCDKF-TCFDNHMKCGATANSSAFCVDNVKRCDGVKDCPGGEDESACTP 3532
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P W+CD ++DC D +DE + + V C PN+ +C
Sbjct: 3533 LVCKKDQFQCGNNRCMPFVWVCDGDIDCP-----DKSDE-----ANCDNVSCGPNDFQC- 3581
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD DC NGEDE C ++KA C+ KC++ KC P
Sbjct: 3582 DSGRCIPLAWRCDDDHDCPNGEDEPASCFSSKATCDPTYFKCNNSKCIP 3630
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPF---CNAE------------CTPGQFSCGMGKCIPE 220
++C+ CDG+ C +G DE P C +E P F CG G+CIP
Sbjct: 2634 HRCIPKEHKCDGEQQCGDGSDETPLLCKCQSEDIDIHQSNNQTKEMPDMFRCGSGECIPR 2693
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ CD DC D SDE C V C S CI W CD + DC D
Sbjct: 2694 KFLCDSLKDC-RDFSDEKMCAPIPCEVSDMTFVHCGNSTMCIMPRWRCDGDPDCP--DGT 2750
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D D C GQ +CA S CI +W CD E D D +DE +
Sbjct: 2751 DELDCANHTSLSCDPGQFRCA-SGNCIAGSWHCDGER-----DRPDGSDE------INCR 2798
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCSP 393
C N+ C S + S CDGK DC +G DEGP C N+ +L K S +C P
Sbjct: 2799 SECRHNQFACDKSR--IPASWQCDGKSDCEDGSDEGPQCPNRPCRPHLFQCKSSGRCIP 2855
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 125/335 (37%), Gaps = 79/335 (23%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+ G NR L + + I D+L+W D L+
Sbjct: 2442 TLDLEQQKLYWADARLDKIERTNYDGSNRVVLAHSTPK--HAFAIAVYGDLLFWTDWVLH 2499
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD---------- 186
V V V + C +NQC L+ C+
Sbjct: 2500 AVVRANKYTGTDVLFLREHVTRPMGIVAVQNTSINC-DANQCKILNGQCEDVCILNKSGH 2558
Query: 187 GKPDCSNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
C+ G +G C N C Q++C G+CIP CD C DGSDE +
Sbjct: 2559 ATCHCTQGVLAPDGRRCIAPVNTSCGLSQYNCHSGECIPLELTCDNVTHC-ADGSDEFRS 2617
Query: 241 -CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT-------DEDWDKFHQCF 291
CI QC C + +CIP CD E C D D T ED D HQ
Sbjct: 2618 YCIFRQCPETHFMCQ-NHRCIPKEHKCDGEQQCG--DGSDETPLLCKCQSEDID-IHQSN 2673
Query: 292 NG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP--- 342
N +C S +CIP +LCD DC D +DE +C P
Sbjct: 2674 NQTKEMPDMFRCG-SGECIPRKFLCDSLKDCR-----DFSDEK----------MCAPIPC 2717
Query: 343 -----NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ CG+S C+ CDG PDC +G DE
Sbjct: 2718 EVSDMTFVHCGNSTMCIMPRWRCDGDPDCPDGTDE 2752
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C FSCG GKCI W
Sbjct: 3691 ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDE---VNCTCHSDHFSCGNGKCIMSRW 3747
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC C +C ++ C+ ++ LCD DC ++ D +
Sbjct: 3748 KCDGWDDCL-DGSDESLETCAKTHCHANAFKCR-NQLCVRNSALCDGVNDCGENE--DES 3803
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +C + Q QC + CI + CD + +C VD +DE + C
Sbjct: 3804 DAVCAALPKCRHDQFQCE-NDDCISKAFRCDGQYNC-----VDGSDE----------MNC 3847
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3848 QPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGP 3881
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGK-CIPESWKCDGFVDCLE-D 233
C+ + CD K DC + DEG C +C GQF CG+ + CIP +W CDG DC + D
Sbjct: 51 CIPMRWKCDSKADCPDMSDEGSECAGAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGD 110
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SDE PN +C + QC L+ C+ + CD DC D++
Sbjct: 111 TSDELNCPNGDTPKCRAFEGQC-LNGDCLELSRFCDGRWDCDNDEL 155
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1463 RIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1522
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1523 VLRNKEI 1529
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 4046 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4105
Query: 164 L 164
+
Sbjct: 4106 V 4106
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++++ + G ++ +I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2417 IQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAH 2475
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 108 LEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L +QWP SL +D LYWCD L+T+E +R+DG+ V
Sbjct: 748 IYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMRLDGTGREV 807
Query: 164 LCHPNELRCGSSNQCVALSKFCDGK 188
L ++ S Q L + D K
Sbjct: 808 LFKSDQFHPYSIVQNNGLIYWADNK 832
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
SH+NT R D + + HP+ L CG S QCV + + CDGK DC + DEG C
Sbjct: 1180 SHINTS---RFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLC 1231
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
+C GQ +C +S+ CIP+NWLCD E DC D D
Sbjct: 79 KCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDTSD 113
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
L ++ + G NR+ LVT + PSS+ +D +++YW D + + V V +G + L P
Sbjct: 413 LSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 472
>gi|417515788|gb|JAA53703.1| prolow-density lipoprotein receptor-related protein 1 precursor [Sus
scrofa]
Length = 4544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPNSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HMCVPERWLCDGDKDC-ADGADESITAGCLYNNTCDDREFMCQ-NRQCIPKHFMCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKTQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC++G DEGP C + C +L C H C PT G C+C
Sbjct: 82 TELCILMSRLCNGIQDCADGSDEGPHCREQRGQCSHLGCQHHCVPTLNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 153/371 (41%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQSPHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG + C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 3326 DGRNCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 3384
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 3385 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 3440
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 3441 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 3489
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3490 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C+ G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACSVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESV-RVDGSHNAVLCHPN-------ELRCGSSNQ--------------CVALSKFCDG 187
+V + R G ++ E+R + Q C +L G
Sbjct: 764 SVYRLERGTGGAPPIVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDKDGVTCLANPSYVPPPQCQPGEFACSNSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAPPIVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDKDG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ C+ S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACSNS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G V+
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEDREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKTQRCQPNEHNCLGTELCI 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ 244
S C+G DC DGSDE C Q
Sbjct: 87 LMSRLCNGIQDC-ADGSDEGPHCREQ 111
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACSVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
>gi|410964879|ref|XP_003988980.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Felis catus]
Length = 4544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSSTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 101/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + C+ +S+ C+G DC +G DEGP C + C L C H C PT G C+C
Sbjct: 77 HNCLGTEMCILMSRLCNGVQDCVDGSDEGPHCRELQGQCSQLGCQHHCVPTLNGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 137 NSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 153/371 (41%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTPHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACRVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGTGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTEMCI 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIP 260
S C+G DC+ DGSDE C GQ Q C+P
Sbjct: 87 LMSRLCNGVQDCV-DGSDEGPHCRE--LQGQCSQLGCQHHCVP 126
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + C+ +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTEMCILMSRLCNGVQDCVDGSDEGPHC 108
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACRVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
>gi|432112067|gb|ELK35095.1| Prolow-density lipoprotein receptor-related protein 1 [Myotis
davidii]
Length = 4213
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 154/318 (48%), Gaps = 34/318 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 954 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 1012
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1013 ETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGV 1067
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1068 THVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPPSH 1117
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+ K CDGK DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1118 PCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1176
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1177 LGMELGPDSHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1235
Query: 462 EPASIIFSSTVDIRRIHL 479
IIFS+ +IRRI L
Sbjct: 1236 --PFIIFSNRHEIRRIDL 1251
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTP 395
A C PNE C + C+ +S+ C+G DC +G DEG C +C L C H C PT
Sbjct: 38 AQRCQPNEHNCLGTELCIPMSRLCNGVQDCMDGSDEGAHCRELLGNCSQLGCQHHCVPTL 97
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G C+C Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +S
Sbjct: 98 NGPTCYCNNSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRS 156
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C A N P D P ++ +++ +I +LNG+
Sbjct: 157 CKAKNEPVDRPPVLLIANSQNILATYLNGA 186
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 149/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 862 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 920
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 921 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 979
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C + + QC L
Sbjct: 980 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHSDEFQCRL 1038
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1039 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1090
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P K C D
Sbjct: 1091 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGKDDCGD 1141
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1142 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDSHTC 1188
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 102/211 (48%), Gaps = 22/211 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3145 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 3204
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D +D
Sbjct: 3205 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG-----DGSD 3258
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E C + CA + +CI W CD + DC+ D +DE C
Sbjct: 3259 EP-KXPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTPRCD 3305
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S C+ L CD DC +G DE
Sbjct: 3306 MDQFQC-KSGHCIPLRWRCDADADCMDGSDE 3335
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 645 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 704
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 705 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGAGGAPPTVTLLRSERPPIFEIRMYDA 764
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C G C+ ED+ G C A +C PG
Sbjct: 765 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLRADGVTCMANPSYVPPPQCQPG 824
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 825 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 883
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 884 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 934
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 935 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 978
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 979 SHSCSST 985
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 140/374 (37%), Gaps = 105/374 (28%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D I+ D R +E A + G NR ++ ++I P + +D +YW D ++
Sbjct: 2929 DYVTERIYWADAREDYIEFASLDGSNRHVVLNQDI--PHIFALTLFEDYVYWTDWETKSI 2986
Query: 152 ESV-RVDGSHNAVLC----HPNELRC------------------------GSSNQCVALS 182
+ G++ +L P +L G ++C +
Sbjct: 2987 NRAHKTTGANKTLLISTLHRPMDLHVFHALRQPDALSSQHCPLACSLLSPGGGHKCACPT 3046
Query: 183 KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL----------- 231
F G +G C + CT QF C KCIP WKCD DC
Sbjct: 3047 NFYLGS--------DGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDXPLLMRSLPP 3098
Query: 232 ----------------------------------EDGSDEPNTCIHQCFNGQVQCALSKK 257
+D SDE N IH C Q +C + +
Sbjct: 3099 ACPADEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNR 3158
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP + C+ + +C D DE C Q QC+++K+CIP W+CD + DC
Sbjct: 3159 CIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC- 3212
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----G 373
VD +DE + + C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3213 ----VDGSDEP----ANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKXPR 3264
Query: 374 PFCNNKADCENLKC 387
P ++ C N +C
Sbjct: 3265 PCSESEFSCANGRC 3278
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/321 (30%), Positives = 134/321 (41%), Gaps = 54/321 (16%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC +D S
Sbjct: 2543 GRCVSNILWCNGADDCGDGSDEIPCNKTACGAGEFRCRDGTCIGNSSRCNQFVDC-DDAS 2601
Query: 236 DEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DE N C F V+ C + C +W+CD DC D D D K
Sbjct: 2602 DEMNCSATDCSSYFRLGVKGVHFQPCEHTSLCYAPSWVCDGANDCG--DYSDERDCPGVK 2659
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2660 RPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQFE 2707
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
C +++C++ CDG DC +G DE A CE C P +C
Sbjct: 2708 C-QNHRCISKQWLCDGSDDCGDGSDEA------AHCEGKTCGPNSFSCPGTHVCV----- 2755
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
P + C D D+ DG+ D++ L L P AV + D +
Sbjct: 2756 -PERWLC-DGDKDCADGA-DESVAAGLLH----------LSPTQGLNNAVALDFDYREQM 2802
Query: 467 IFSSTVD-----IRRIHLNGS 482
I+ + V IRR+HLNGS
Sbjct: 2803 IYWTDVTTQGSMIRRMHLNGS 2823
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC +GEDE CN C+ QF C +CI + W CDG DC DG
Sbjct: 2672 SGRCIPMSWTCDKEDDCEHGEDE-THCNKFCSEAQFECQNHRCISKQWLCDGSDDC-GDG 2729
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
SDE C + C C + C+P WLCD + DC+
Sbjct: 2730 SDEAAHCEGKTCGPNSFSCPGTHVCVPERWLCDGDKDCA 2768
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 21/178 (11%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C C + C+P WLCD + DC+ D D + + + +AL+F++
Sbjct: 2741 CGPNSFSCPGTHVCVPERWLCDGDKDCA--DGADESVAAGLLHLSPTQGLNNAVALDFDY 2798
Query: 65 RNQSLCFIQQQNVSSVRLRCAQIN----DLLNSWDLPAPEIFPLD-------------ER 107
R Q + + S+ +R +N +L+ L P+ +D +
Sbjct: 2799 REQMIYWTDVTTQGSM-IRRMHLNGSDVQVLHRTGLSNPDGLAVDWVGGNLYWCDKGRDT 2857
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+E + ++G R+ LV+ ++ P +LV+D LYW D + + + +DGS +V+
Sbjct: 2858 IEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHSLIGRIGMDGSGRSVI 2915
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY + LYWCD+ + +E + ++ N
Sbjct: 1999 RIERSRLDGTERVVLVNVSISWPNGISVDYQEGKLYWCDARTDKIERIDLETGEN 2053
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE---------------RLEKAGMHGE 116
I + V R+ + ++ P F LDE + +A + G
Sbjct: 2274 ITRHTVDQTRVGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRAALSGA 2333
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2334 NALTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2381
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 316 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 373
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 42/223 (18%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--------IHQCFNGQVQCALSKKCIP 260
+F C G+CI S CDG C + ++P+ C QC NG +C+
Sbjct: 2496 EFECANGECIHFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCNNG--------RCVS 2547
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STD 319
+ C+ DC D +DE C G+ +C CI ++ C++ +DC
Sbjct: 2548 NILWCNGADDCG-----DGSDEIPCNKTACGAGEFRCR-DGTCIGNSSRCNQFVDCDDAS 2601
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
D ++ + D YF H C ++ C A S CDG DC + DE
Sbjct: 2602 DEMNCSATDCSSYFRLGVKGVHFQP--CEHTSLCYAPSWVCDGANDCGDYSDE------- 2652
Query: 380 ADCENLKCSHKCSPTPRGAMCF--CPAGQ-NPNKTQCVDADEC 419
DC +K PR + + CP+G+ P C D+C
Sbjct: 2653 RDCPGVK-------RPRCPLNYFACPSGRCIPMSWTCDKEDDC 2688
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1373 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1425
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1426 YSARYDGSGHMEVLRGHEF 1444
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
C ++ +C S C+ L CD DC +G DE C +F C C P +W
Sbjct: 3304 CDMDQFQC-KSGHCIPLRWRCDADADCMDGSDEEACSTGVRTCPLDEFQCNNTLCKPLAW 3362
Query: 223 KCDGFVDCLEDGSDEPNTC 241
KCDG DC ++ + P C
Sbjct: 3363 KCDGEDDCGDNSDENPEEC 3381
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + C+ +S+ C+G DC +G DEG C
Sbjct: 38 AQRCQPNEHNCLGTELCIPMSRLCNGVQDCMDGSDEGAHCR 78
>gi|358412256|ref|XP_003582266.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Bos taurus]
Length = 4544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C PG FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPGSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESVAAGCLYNSTCDDREFMCQ-NRQCIPKHFMCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 HKLSGCSQDCEDLKIGFKCRCRPGFRXKDDGRTCADMDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC++G DEG C + C +L C H C PT G C+C
Sbjct: 82 TELCILMSRLCNGVQDCADGSDEGSHCREQRGQCSHLGCQHHCVPTLNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 151/371 (40%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTSHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSMDPKLTSCATNASICGDEARCVRTEKAAYCACRTGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG + C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 3326 DGRNCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 3384
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 3385 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 3440
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 3441 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 3489
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3490 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESV-RVDGSHNAVLCHPN-------ELRCGSSNQ--------------CVALSKFCDG 187
+V + R G ++ E+R + Q C +L G
Sbjct: 764 SVYRLERGTGGAAPIVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACSNSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 133/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP--FCNAE 204
H LCH E R GS + L + G P + E P F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAAPIVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ C+ S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACSNS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G V+
Sbjct: 2032 RIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCI 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ 244
S C+G DC DGSDE + C Q
Sbjct: 87 LMSRLCNGVQDC-ADGSDEGSHCREQ 111
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFGLTCDGVSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
A C PNE C + C+ +S+ C+G DC++G DEG C +
Sbjct: 69 AQRCQPNEHNCLGTELCILMSRLCNGVQDCADGSDEGSHCREQ 111
>gi|431914039|gb|ELK15301.1| Prolow-density lipoprotein receptor-related protein 1 [Pteropus
alecto]
Length = 4544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/344 (34%), Positives = 166/344 (48%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C A+ C P FSC G
Sbjct: 2726 DETHCNTFCSEAQFEC-QNHRCISKLWLCDGSDDCGDGSDESAHCEAKTCGPNSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PESW CDG DC DG+DE T C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPESWLCDGDKDC-ADGADESVTAGCLYNNTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + CDG+ DC +G DE N+
Sbjct: 2891 ----APMNPHCTSPEHKCYASSQFLCGNGRCVAEALLCDGQDDCGDGSDERGCHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R++HL+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLHLDGS 3047
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 82 TELCILMSRLCNGVQDCMDGSDEGPHCRELRGNCSQLGCQHHCVPTFNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 151/371 (40%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPSTAQTSHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTENAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETVLLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGTGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 107/264 (40%), Gaps = 56/264 (21%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEVLCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATNCSSYFRLGVKGVQFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC---------------------------- 316
K +C C S +CIP +W CD E DC
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDREDDCEHGEDETHCNTFCSEAQFECQNHRCISK 2749
Query: 317 -----STDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+DD D +DE +H A C PN C ++ CV S CDG DC++G
Sbjct: 2750 LWLCDGSDDCGDGSDES-----AHCEAKTCGPNSFSCPGTHVCVPESWLCDGDKDCADGA 2804
Query: 371 DE----GPFCNNKADCENLKCSHK 390
DE G NN D C ++
Sbjct: 2805 DESVTAGCLYNNTCDDREFMCQNR 2828
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E+V ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETVLLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANALTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCI 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S C+G DC+ DGSDE C
Sbjct: 87 LMSRLCNGVQDCM-DGSDEGPHC 108
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + C+ +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCILMSRLCNGVQDCMDGSDEGPHC 108
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEVLCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TNCSSYFRLGVKGVQFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
>gi|359065534|ref|XP_003586126.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Bos taurus]
Length = 4544
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C N + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHNDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C PG FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPGSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESVAAGCLYNSTCDDREFMCQ-NRQCIPKHFMCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADMDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 101/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC++G DEG C + C +L C H C PT G C+C
Sbjct: 82 TELCILMSRLCNGVQDCADGSDEGSHCREQRGQCSHLGCQHHCVPTLNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 151/371 (40%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTSHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSMDPKLTSCATNASICGDEARCVRTEKAAYCACRTGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3874 DDNEIRSLFPS 3884
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG + C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 3326 DGRNCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 3384
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 3385 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 3440
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 3441 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 3489
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3490 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3526
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 148/347 (42%), Gaps = 78/347 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCI---------------------------------------- 242
CD DC D SDE +C
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAGCS 1012
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H C + Q +C S +CIP +W CD + DC +D+ N T++ C N + QC L
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCGDYSDETHANCTNQATRPPGGCHNDEFQCRL 1071
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSK 358
CIP W CD + DC +D++DE + +H +C PN + C S +C++ +
Sbjct: 1072 DGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVTH---VCDPNVKFGCKDSARCISKAW 1123
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC---SHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE +CE+L C SH C+ ++C P C D
Sbjct: 1124 VCDGDSDCEDNSDE-------ENCESLACRPPSHPCANNT--SVCLPPDKLCDGNDDCGD 1174
Query: 416 A-------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSC 453
D+C L +G C C+ VCSC G L PD +C
Sbjct: 1175 GSDEGELCDQCSLNNGGCSHNCSVAPGEGIVCSCPLGMELGPDNHTC 1221
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESV-RVDGSHNAVLCHPN-------ELRCGSSNQ--------------CVALSKFCDG 187
+V + R G ++ E+R + Q C +L G
Sbjct: 764 SVYRLERGTGGAAPIVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACSNSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 133/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP--FCNAE 204
H LCH E R GS + L + G P + E P F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAAPIVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ C+ S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACSNS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G V+
Sbjct: 2032 RIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCI 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ 244
S C+G DC DGSDE + C Q
Sbjct: 87 LMSRLCNGVQDC-ADGSDEGSHCREQ 111
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFGLTCDGVSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF V P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVRFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
A C PNE C + C+ +S+ C+G DC++G DEG C +
Sbjct: 69 AQRCQPNEHNCLGTELCILMSRLCNGVQDCADGSDEGSHCREQ 111
>gi|322797679|gb|EFZ19688.1| hypothetical protein SINV_80786 [Solenopsis invicta]
Length = 612
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/304 (36%), Positives = 148/304 (48%), Gaps = 26/304 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE +C S +CV ++ CD + DC + DE N C+ QF+C +CIP +WKC
Sbjct: 30 CSANEFQC-KSGRCVPMTFHCDSENDCGDYSDEIGCPNVTCSANQFACANNRCIPATWKC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC D SDE C + C Q C S CIP +W+CD + DC D DE
Sbjct: 89 DSENDC-GDSSDEGEFCAAKTCSYFQFTCPRSGHCIPKSWVCDGDSDC-----FDQQDEM 142
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + Q CA K C+ ++ CD DC+ D +DE + + C+ +
Sbjct: 143 DCPPVTCLSTQFTCADQKMCVLASYKCDGISDCN-----DGSDEVGCPSLAPDQ--CNVD 195
Query: 344 -ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC-------ENLKCSHKCSPTP 395
+ +C SS C+ S +CDG DC + DE C K DC + C++ C TP
Sbjct: 196 KQFQCVSSAICIPRSWYCDGTADCPDKSDEPESC-GKVDCQPGFFSHQGGLCTNACFQTP 254
Query: 396 RGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
GA C CP G+ + + C D +EC G C Q C NT SY CSC EGYTL D +C
Sbjct: 255 LGAQCTCPTGEELSSDGFTCQDINECEPQGKCSQLCVNTKGSYYCSCVEGYTLDADKHTC 314
Query: 454 TAVN 457
A N
Sbjct: 315 KAFN 318
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ +++ DGS
Sbjct: 461 RIERIGMDGTNRSTIISTKIYWPNGLALDIANRRIYFADSKLDFIDTCLYDGSKRLQVLA 520
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 521 SSHYLLHPHSL 531
>gi|410968986|ref|XP_003990980.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Felis catus]
Length = 4622
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 160/326 (49%), Gaps = 31/326 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ +C+ CD DCS+G DE C Q +C G C S KC
Sbjct: 84 CSSHQITC-SNGECIPKEYRCDHVRDCSDGTDEKDCQYPTCE--QLTCASGACYNSSQKC 140
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG +DC D SDE N C +C + QC + CIP ++CD DC D +DE
Sbjct: 141 DGRIDC-RDSSDESN-CTQECSQHEFQCDIGV-CIPRIYVCDHYPDCE-----DGSDERS 192
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C + CI N +CD E DC DN DE+ + +H C+P E
Sbjct: 193 CAYETCRGNQFTCP-NGYCISQNMVCDGEDDCR-----DNGDENGCESSTHRFHECYPGE 246
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+ + K CDG DC GEDE G FC+ C L C ++C P+P G +
Sbjct: 247 WACPESGKCIPVLKVCDGTLDCPGGEDETNITKGRFCDVNL-CFILSCEYQCHPSPNGGI 305
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C CP G QN +T CVD D+C I G CDQ C + + C C EGY L + C A
Sbjct: 306 CHCPLGFVVDQNNTRT-CVDFDDCQIWGICDQMCEDRTGHHQCHCAEGYVLEHQ-QHCKA 363
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNG 481
N ++P +IFS+ D+ ++G
Sbjct: 364 -NTSSEQPF-VIFSNGRDLLIGDIHG 387
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/300 (36%), Positives = 141/300 (47%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C P++ RC ++C+ LS CDG DC +G DE C CT QF C G+CI ++
Sbjct: 1123 CLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDENG-CVINCTASQFKCASEGRCISNIYR 1180
Query: 224 CDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE + C + QC CIP +W CD DC I +
Sbjct: 1181 CDGVFDC-NDHSDEVDCSTRPPGMCHPDEFQCQADGVCIPKSWECDGHPDC----IFGSD 1235
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ C + C + CI +WLCD + DC D +DE K A C
Sbjct: 1236 EHHGCAPKTCPSTHFLCD-NGNCIYRDWLCDGDNDCR-----DMSDE---KDCPTQAFHC 1286
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + CV LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1287 PSWQWQCPGHSICVNLSAVCDGISDCPNGTDESPLCNQDSCSDSNGGCTHQCVQGPYGAQ 1346
Query: 400 CFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C C +G N +KT C D EC I G C Q C N S+ C C + YTL +G++C
Sbjct: 1347 CVCTSGYLLANDSKT-CEDIYECDIPGFCSQHCYNVRGSFRCWCDKEYTLDTNGRTCKVT 1405
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 152/335 (45%), Gaps = 32/335 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN--GEDEGPFC-NAECTPGQFSCGMG- 215
++ C NE +C S +C+ CDG DC + EDE C N C+ +F C
Sbjct: 2872 YHEATCLSNEFKC-DSGRCIRREWICDGDNDCGDMSDEDERHHCGNHSCSSSEFLCANNV 2930
Query: 216 ----KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
KCIP+SW CDG DC DGSDE C + +G + +C+PH++ CD DC
Sbjct: 2931 PPSRKCIPQSWVCDGDADCT-DGSDEHQNCTRRSCSGNDFTCSNGRCVPHSYRCDRRDDC 2989
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE + C + C + CI +CD E DC D +DE+ +
Sbjct: 2990 G-----DYSDERDCLYPTCSESEFTCQ-NGLCIYKQEVCDGENDCR-----DGSDEE--E 3036
Query: 332 YFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSH 389
+ H C P++ +C + N C+ + K C+ DCS+ DE G N D C
Sbjct: 3037 HLCHTPETTCPPHQFKCNNGN-CIDMVKVCNHLDDCSDNSDEKGCGVNECNDPLLSGCDQ 3095
Query: 390 KCSPTPRGAMCFCPAGQNP--NKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTL 446
C+ T C C G + C D DEC C Q C N SY+C C GY
Sbjct: 3096 NCTDTLTSFYCSCRPGYKLMFDNRSCDDIDECKETPFVCSQKCENVMGSYICKCAPGYLR 3155
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
PDGKSC + EP +IFS+ +R + L+G
Sbjct: 3156 EPDGKSCRQNS--NIEPY-LIFSNRYYLRNLTLDG 3187
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/354 (31%), Positives = 159/354 (44%), Gaps = 70/354 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C P ++C ++N C+ CD DC + DE P FC A C +F C G+CIP W
Sbjct: 2793 CLPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFCAAHTCNNEEFHCTSGRCIPRHW 2852
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP+TC + C + + +C S +CI W+CD + DC D+ D
Sbjct: 2853 YCDEEADC-PDGSDEPDTCEYHEATCLSNEFKCD-SGRCIRREWICDGDNDCG--DMSDE 2908
Query: 280 TDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ H C + + CA S+KCIP +W+CD + DC+ D +DE + +
Sbjct: 2909 DERHHCGNHSCSSSEFLCANNVPPSRKCIPQSWVCDGDADCT-----DGSDE----HQNC 2959
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCN-NKADCENLKCSHK 390
C N+ C S+ +CV S CD + DC + DE P C+ ++ C+N C +K
Sbjct: 2960 TRRSCSGNDFTC-SNGRCVPHSYRCDRRDDCGDYSDERDCLYPTCSESEFTCQNGLCIYK 3018
Query: 391 C-----------SPTPRGAMCFCPAGQNP------NKTQCVD------------------ 415
+C P P N C+D
Sbjct: 3019 QEVCDGENDCRDGSDEEEHLCHTPETTCPPHQFKCNNGNCIDMVKVCNHLDDCSDNSDEK 3078
Query: 416 ---ADEC---LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+EC L+ G CDQ CT+T S+ CSC GY L D +SC ++ ++ P
Sbjct: 3079 GCGVNECNDPLLSG-CDQNCTDTLTSFYCSCRPGYKLMFDNRSCDDIDECKETP 3131
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 139/328 (42%), Gaps = 28/328 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC C+ CD DC + DE C PG F C G C+PE KC
Sbjct: 3728 CSESEFRC-DDQSCIPSRWVCDHTNDCGDNSDERDCELKTCQPGYFQCQSGHCVPEQSKC 3786
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
DG DCL D SDE TC + NG A +C H +W CD + DC D
Sbjct: 3787 DGTADCL-DASDEA-TCPTRFPNGAYCSATMFECKNHVCIRSSWKCDGDNDCG-----DG 3839
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H C + +C + + E+ DD D +DE ++ + +
Sbjct: 3840 SDEE---LHLCLDVSCDSPYRFRCDNNRCIYKHELCNHVDDCGDGSDEKEEQCVASTSRP 3896
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA 398
C +E +C S+ C++ CD DC + DE G + C C C+ G
Sbjct: 3897 CREDEFKC-SNGHCISQHLVCDDVDDCGDHFDETGCNTGKERSCAENLCEQNCTQLSEGG 3955
Query: 399 -MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKS 452
+C C G ++ C D +EC G C Q C NT SY CSC EG+ D GK
Sbjct: 3956 FICSCRPGFKASILDRNSCDDINECEQFGVCPQHCQNTKGSYECSCAEGFRSVSDHYGKR 4015
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A P ++ V IR+ +L+
Sbjct: 4016 CAA----DGNPPLLLLPENVRIRKYNLS 4039
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C +
Sbjct: 3483 CSSTQFLCANNEKCIPIWWKCDGQRDCSDGSDEPVLCPQRYCPLGQFQCKDGNCTSSHFL 3542
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE H+C + + QCA +K+CIP W CD E DC DN+D
Sbjct: 3543 CNAHQDC-PDGSDEDQILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSD 3595
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C G +CA + CIP W CD + DC D +DE + SH
Sbjct: 3596 EDVYNCASRICQPGYFKCA-NNHCIPQGWKCDVDNDCG-----DYSDEPVSECMSHRCD- 3648
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +CV C+G DC + DE
Sbjct: 3649 -NHTEFSCRTNYRCVPQWAVCNGFDDCRDNSDE 3680
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 141/337 (41%), Gaps = 88/337 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S +++ I+WP+ + IDY D+LYW D+HL +E ++G H +
Sbjct: 3317 IGRVGMDGVNKSVIISTKIEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGRHRHTVYD- 3375
Query: 168 NELRCGSSNQCVALSKFCD------------GKPDCSNGEDEGPFCNAECTP-------- 207
G+ + A++ F D K + +G D N P
Sbjct: 3376 -----GTLSHPFAITIFEDIIYWTDWNTRTVEKGNKYDGSDRTVLVNTTHKPFDIHVYHP 3430
Query: 208 ----------GQFSCGMGKCIPESWKCDGFV-DCLEDGS----DEPNTCIHQCFNGQVQC 252
G + G + +GF +C +D + N C+ +C + Q C
Sbjct: 3431 YRQPVVNNPCGTNNGGCSHLCLITAGGNGFTCECPDDFRTIHMGDLNFCLPKCSSTQFLC 3490
Query: 253 ALSKKCIPHNWLCDEEMDCS--TDDIV--------------------------------- 277
A ++KCIP W CD + DCS +D+ V
Sbjct: 3491 ANNEKCIPIWWKCDGQRDCSDGSDEPVLCPQRYCPLGQFQCKDGNCTSSHFLCNAHQDCP 3550
Query: 278 DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DED + H+C + + QCA +K+CIP W CD E DC DN+DED ++
Sbjct: 3551 DGSDEDQILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSDED---VYNC 3601
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P +C ++N C+ CD DC + DE
Sbjct: 3602 ASRICQPGYFKC-ANNHCIPQGWKCDVDNDCGDYSDE 3637
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 142/375 (37%), Gaps = 109/375 (29%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
S+ +CV CDG DC + DE G F N C F+C G+CIP WKCD DC
Sbjct: 1008 SNGRCVPSHYRCDGVDDCHDNSDEHLCGKF-NNSCASSAFTCSHGECIPAHWKCDKQNDC 1066
Query: 231 LEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------------- 272
+ DGSDE P+ C C + CIP +WLCD + DC+
Sbjct: 1067 V-DGSDEQNCPSQAPTSCPASLFTCD-NNLCIPRSWLCDTDNDCADGSDEKNCEFTETCL 1124
Query: 273 --------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
D VD +DE+ + C Q +CA +CI + + CD
Sbjct: 1125 PSQFRCPDHRCIDLSFVCDGDKDCVDGSDENGCVIN-CTASQFKCASEGRCISNIYRCDG 1183
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC+ D++DE + +CHP+E +C + C+ S CDG PDC G DE
Sbjct: 1184 VFDCN-----DHSDE--VDCSTRPPGMCHPDEFQCQADGVCIPKSWECDGHPDCIFGSDE 1236
Query: 373 ----GP--------------------FCNNKADCENLKCSHKCSPT------------PR 396
P C+ DC ++ C PT P
Sbjct: 1237 HHGCAPKTCPSTHFLCDNGNCIYRDWLCDGDNDCRDMSDEKDC-PTQAFHCPSWQWQCPG 1295
Query: 397 GAMCF-----------CPAGQNP----NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
++C CP G + N+ C D+ +G C C C CT
Sbjct: 1296 HSICVNLSAVCDGISDCPNGTDESPLCNQDSCSDS-----NGGCTHQCVQGPYGAQCVCT 1350
Query: 442 EGYTLRPDGKSCTAV 456
GY L D K+C +
Sbjct: 1351 SGYLLANDSKTCEDI 1365
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 112/235 (47%), Gaps = 34/235 (14%)
Query: 177 QCVALSKFCDGKPDCSNGE--DEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLED 233
+C+ L C+G +C + + DE C PG C CIP + CD DC +
Sbjct: 2763 RCIPLQFVCNGINNCHDNDTSDEKNCAERACLPGYVKCQTTNICIPHFYLCDEDNDCGDM 2822
Query: 234 GSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQ-- 289
+ P C H C N + C S +CIP +W CDEE DC D +DE D ++H+
Sbjct: 2823 SDESPVFCAAHTCNNEEFHCT-SGRCIPRHWYCDEEADCP-----DGSDEPDTCEYHEAT 2876
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + +C S +CI W+CD + DC D +DED + +++ C +E C +
Sbjct: 2877 CLSNEFKCD-SGRCIRREWICDGDNDCG-----DMSDEDERHHCGNHS--CSSSEFLCAN 2928
Query: 350 ----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA------DCENLKC---SHKC 391
S +C+ S CDG DC++G DE C ++ C N +C S++C
Sbjct: 2929 NVPPSRKCIPQSWVCDGDADCTDGSDEHQNCTRRSCSGNDFTCSNGRCVPHSYRC 2983
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 129/345 (37%), Gaps = 88/345 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL----------------------- 141
+ ++E+A + G R P+V ++ WP+ L +DY D+L
Sbjct: 2501 NAKIERATLGGNFRVPIVNSSLVWPNGLTLDYENDLLYWADASLQKIERSTLTGTQREVI 2560
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGSSNQC 178
YW D + + + DGS + PN +R NQ
Sbjct: 2561 VNRAFHPFSLTLYGQYIYWTDWNTKKIYRANKYDGSGQMAMTMSFPFRPNGIRVIVKNQQ 2620
Query: 179 VALSKFCDGKPDCSNGEDEGP--------------------FC----NAECTPGQFSCGM 214
+ + CS+ GP +C C +F+C
Sbjct: 2621 QCSNPCSEFNGGCSHICAPGPNGAECQCPHEGRWYLANNKKYCIVDNGTRCDSSKFTCLN 2680
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G CI E WKCD DC DGSDE H C C + +C+ +++ CD DC
Sbjct: 2681 GHCISEQWKCDNDNDC-GDGSDELEIVCAFHTCPQTAFTCD-NGRCVQYHYRCDHYNDCG 2738
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE F C +++CIP ++C+ +C +D D +K
Sbjct: 2739 -----DNSDEAGCLFRDCNATSEFTCNNRRCIPLQFVCNGINNCHDNDTSD------EKN 2787
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC 376
+ A C P ++C ++N C+ CD DC + DE P FC
Sbjct: 2788 CAERA--CLPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPVFC 2830
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 152/404 (37%), Gaps = 92/404 (22%)
Query: 40 TDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVSSVRL---- 82
+D D FK+ +NGT L N +SL F +++S +RL
Sbjct: 732 SDTSKDMIFKQNINGTGREILTANRVESVESLTFDWISKNLYWTDASYRSISVMRLADKS 791
Query: 83 RCAQINDLLNSWDLP----APEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
R A I +L N + A IF D ++ +A G N P+V + WP+ L I
Sbjct: 792 RRAIIQNLNNPRSIVVHPIAGYIFFTDWFRPAKIMRAWSDGSNLLPIVNTTLGWPNGLAI 851
Query: 135 DYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHPNEL------------RCGSSN 176
D+ LYW D+ + +E DG H + HP L R G+
Sbjct: 852 DWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHIQQMTHPFGLTVFGDYVFFTDWRLGAIV 911
Query: 177 QC------------VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
+ ++ K +N + +CN P +P +
Sbjct: 912 RVRKMDGGDMRVIRSGITNIMHVKSYDANTQTGSNYCNRPTHPNGDCSHFCFPVPNFQRV 971
Query: 225 DG----------FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G + C ED S EP + QC C+ + +C+P ++ CD D
Sbjct: 972 CGCPYGMNLTSNHLTCQEDPSHEPP--LEQCGALSFPCS-NGRCVPSHYRCD-----GVD 1023
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDED 328
D DN+DE H C CA S +CIP +W CD++ DC VD +DE
Sbjct: 1024 DCHDNSDE-----HLCGKFNNSCASSAFTCSHGECIPAHWKCDKQNDC-----VDGSDE- 1072
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ A P L +N C+ S CD DC++G DE
Sbjct: 1073 --QNCPSQAPTSCPASLFTCDNNLCIPRSWLCDTDNDCADGSDE 1114
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 136 YNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
Y D ++ C+ H + V+ S R G +CHP+E +C + C+ S CDG PDC G
Sbjct: 1179 YRCDGVFDCNDHSDEVDCSTRPPG-----MCHPDEFQCQADGVCIPKSWECDGHPDCIFG 1233
Query: 195 EDEGPFCNAECTPG-QFSCGMGKCIPESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQ 251
DE C + P F C G CI W CDG DC + D D P H C + Q Q
Sbjct: 1234 SDEHHGCAPKTCPSTHFLCDNGNCIYRDWLCDGDNDCRDMSDEKDCPTQAFH-CPSWQWQ 1292
Query: 252 CALSKKCIPHNWLCDEEMDC 271
C C+ + +CD DC
Sbjct: 1293 CPGHSICVNLSAVCDGISDC 1312
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S R++ A+++ W D PA + + + ++E A M
Sbjct: 4125 IYWSDAKSKRIQVAKLDGRYTKWLISTQLDQPAAVVVNPKLGLMYWTDWGREPKIESAWM 4184
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G++R+ LV +++ WP+ L IDY N D +YW D N +ES++ DG+ ++
Sbjct: 4185 DGQHRNILVQEDLGWPTGLTIDYLNNDRIYWSDFKENNIESIKHDGTDRRIV 4236
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WPS + IDY +LY+ DS+L+ ++ +G H
Sbjct: 1552 RIERASMDGSLRTVIVQDKIFWPSGITIDYPNRLLYFIDSYLDYIDYCDYNGQHRRQVIA 1611
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1612 SDLILRHPYAL 1622
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 108/294 (36%), Gaps = 63/294 (21%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C N + C S +CIP +W CDEE DC D +DE
Sbjct: 2833 HTCNNEEFHCT-SGRCIPRHWYCDEEADCP-----DGSDE-------------------- 2866
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENR 118
C + S +C + W D ++ DER G H +
Sbjct: 2867 ----PDTCEYHEATCLSNEFKCDSGRCIRREWICDGDNDCGDMSDEDER-HHCGNHSCSS 2921
Query: 119 SPLVTKNIQWPS------SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
S + N PS S V D + D D H N C N+ C
Sbjct: 2922 SEFLCANNVPPSRKCIPQSWVCDGDADCTDGSDEHQNCTRRS----------CSGNDFTC 2971
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S+ +CV S CD + DC + DE C+ +F+C G CI + CDG DC
Sbjct: 2972 -SNGRCVPHSYRCDRRDDCGDYSDERDCLYPTCSESEFTCQNGLCIYKQEVCDGENDC-R 3029
Query: 233 DGSDEPNTCIH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DGSDE H C Q +C + CI +C+ DCS DN+DE
Sbjct: 3030 DGSDEEEHLCHTPETTCPPHQFKCN-NGNCIDMVKVCNHLDDCS-----DNSDE 3077
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + ++E+A M G NR LV + WP+ + +D +YW D + +E+V DG
Sbjct: 504 ESLSGEPKVERAFMDGTNRKDLVKTKLGWPAGITLDIVLKRVYWVDCRFDYIETVTYDGI 563
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 564 QRKTVVHGGSL 574
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 52 LNGTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ + +L L RNQ + Q N+ SV + I + +D + +F D
Sbjct: 1404 VTASESLLLLVASRNQIVADNITSQVHNIYSVVRNGSHIVAI--DFDSISSRVFWSDGGQ 1461
Query: 107 -RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+ A ++G +R L+ + S+V+D+ LYW D L T+E ++DG+H VL
Sbjct: 1462 GTIWSAFLNGTDRRVLLNSGVTMTESMVVDWVGRNLYWTDYALETIEVSKLDGTHRTVLI 1521
Query: 166 HPN 168
N
Sbjct: 1522 SHN 1524
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNA 203
+H C+P E C S +C+ + K CDG DC GEDE G FC+
Sbjct: 236 THRFHECYPGEWACPESGKCIPVLKVCDGTLDCPGGEDETNITKGRFCDV 285
>gi|17508271|ref|NP_492127.1| Protein LRP-1 [Caenorhabditis elegans]
gi|1708868|sp|Q04833.1|LRP_CAEEL RecName: Full=Low-density lipoprotein receptor-related protein;
Short=LRP; Flags: Precursor
gi|156360|gb|AAA28105.1| LDL receptor-related protein [Caenorhabditis elegans]
gi|3876533|emb|CAA98124.1| Protein LRP-1 [Caenorhabditis elegans]
Length = 4753
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 151/307 (49%), Gaps = 20/307 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ C ++ +C+ + CDG DC +G DE +C+ QF C G+ C+P
Sbjct: 1187 CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSALQFRCANGRQCVPLR 1245
Query: 222 WKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + + C Q +C S CIP +W CD + DC DD D
Sbjct: 1246 NHCDGQSDC-EDGSDEDSCAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDC--DDGSDE 1302
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNA 337
QC + Q +C + +CI +NWLCD E DC D +DE ++ S NA
Sbjct: 1303 PKFGCTSGRQCSSDQFKCG-NGRCILNNWLCDGENDCG-----DGSDESSERGCKTSMNA 1356
Query: 338 VLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + C + + C+ L + CDGK C G DEG C + CS KC +P
Sbjct: 1357 RKCPFEHVACENDQETCIPLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSP 1416
Query: 396 RGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G +C CP G Q NKT+C +ECL SC Q C + + CSC EGY L D ++C
Sbjct: 1417 NGPICSCPFGEQLVNKTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCK 1476
Query: 455 AVNVPQD 461
+ +D
Sbjct: 1477 VADNVKD 1483
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 150 TVESVRVDGSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNA 203
+V S + S N +C+ N+ RC + +C+ CDG DCS+GEDE P C +
Sbjct: 36 SVRSRIISASVNTASSVCNENDFRC-NDGKCIRTEWKCDGSGDCSDGEDEKDCPHPGCKS 94
Query: 204 --------------------------ECTPGQ-----------------FSCGMGK-CIP 219
+C G F C G+ C
Sbjct: 95 DQWQCDTYTWHSVSCIAEYQRCDNITDCADGSDEKDCPASTVDCSSQNVFMCADGRQCFD 154
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
S KCDG DC D SDE ++C CF Q +CA +CI +W+CD DC+
Sbjct: 155 VSKKCDGKYDC-RDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCA---- 209
Query: 277 VDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE D +F +C + QC +K+C P + CD DC DN+DED
Sbjct: 210 -DGSDEPDTCEFKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDED-----EC 257
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C P + C + C+ K CDG DC++G DE N C +L C C P+P
Sbjct: 258 GEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNL--CPSLGCQAGCHPSP 315
Query: 396 RGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
G C CP+G + C D +EC G CDQ C N + CSC
Sbjct: 316 HGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSC 363
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 152/341 (44%), Gaps = 41/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE C PG C G CI E C
Sbjct: 3878 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCLPGHRQCDDGTCIAEHKWC 3936
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +CA S CIP ++CD + DC DN+D
Sbjct: 3937 DRKKDC-PNAADELHCEDVSRRTCSPFEFECANSV-CIPRKFMCDGDNDCG-----DNSD 3989
Query: 282 EDWDKFHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E +C + Q +CA S+ C+ LC+ DC +D D + +
Sbjct: 3990 E---TSSECRSAQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMCSSFSEY 4046
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNNKADCENLKCSH 389
C ++ +C ++ +CV + CD K DC + DE G + +A N C H
Sbjct: 4047 GD--CSSDQFKC-ANGKCVNGTVACDRKDDCGDASDEIGCSKHGGKTSCEAFGNNGGCKH 4103
Query: 390 KCSPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-- 444
C+ G C C G P+ +C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 4104 ICTDVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYEN 4163
Query: 445 ---TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+GS
Sbjct: 4164 NVVVGSMTGKDCRA----KGDAANVMIGADDSLVQLSLHGS 4200
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 110/223 (49%), Gaps = 30/223 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC----NAECTPGQFSCGMGKCIP 219
C N ++C ++ +C+ CDG DC + DE +C C +F C +CIP
Sbjct: 1101 CAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIP 1160
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTD 274
E WKCD DC DGSDE + C N Q CA + +CIP WLCD + DC
Sbjct: 1161 EQWKCDSDNDC-GDGSDEK---LEMCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC--- 1212
Query: 275 DIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D TDED ++ QC Q +CA ++C+P CD + DC D +DED
Sbjct: 1213 --YDGTDEDKERCPPVQCSALQFRCANGRQCVPLRNHCDGQSDCE-----DGSDED---S 1262
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+ A C P++ +C SS C+ S CDG+ DC +G DE F
Sbjct: 1263 CAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKF 1305
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 144/336 (42%), Gaps = 74/336 (22%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE---CTPGQFSCGM 214
+ NA L P +C+ + CDG C+ GEDE C E C G+F C
Sbjct: 3057 TSNAKLAQPKY-------ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSN 3109
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CI +W+CDG DCL DGSDE C + C QCA + KC+P++W CD DC
Sbjct: 3110 QHCIHSTWECDGDNDCL-DGSDEHANCTYSSCQPDFFQCA-NHKCVPNSWKCDGNDDC-- 3165
Query: 274 DDIVDNTD-----EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+D D D K +C NGQ QC S +CI +CD DC+ D +DE
Sbjct: 3166 EDGSDEKDCPKNSASAQKASKCSNGQFQCT-SGECIDDAKVCDRNFDCT-----DRSDE- 3218
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ LC +E CS E P C K C ++K
Sbjct: 3219 --------SSLCFIDE---------------------CSLAEK--PLCEQK--CMDMKIG 3245
Query: 389 HKCSPTPRGAMCF-CPAGQNPNKTQCVDADECL--IDGSCDQTCTNTHLSYVCSCTEGYT 445
+KC CF A ++ C + +EC I G C Q C + SY C C +GY
Sbjct: 3246 YKCD-------CFEGFAIDISDQKSCHNVNECYEGISG-CSQKCDDKIGSYKCGCVDGYQ 3297
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
L D SC + + EP + ++ IR+I ++G
Sbjct: 3298 LSSDDHSCKRTEM-EPEPF-FLLANKHYIRKISIDG 3331
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE----PNTCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 1060 QFQCKNGRCIPKEWKCDGENDCL-DESDEIDEKGDKCFHETECAENTIKCRNTKKCIPAQ 1118
Query: 263 WLCDEEMDC---------------------------------------STDDIVDNTDED 283
+ CD + DC S +D D +DE
Sbjct: 1119 YGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCGDGSDE- 1177
Query: 284 WDKFHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
K C N Q CA + +CIP WLCD + DC D TDED ++ V
Sbjct: 1178 --KLEMCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDEDKERC---PPV 1226
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + RC + QCV L CDG+ DC +G DE
Sbjct: 1227 QCSALQFRCANGRQCVPLRNHCDGQSDCEDGSDE 1260
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE C + CT +F C KCI +
Sbjct: 3709 CDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCNNNKCIAK 3768
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W+CD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3769 AWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCR-----DNS 3823
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DED + C + G+ +CA S KCIP W+CD E DC DN+DE D
Sbjct: 3824 DEDKQRCPTCDDVGEFRCATSGKCIPRRWMCDTENDCG-----DNSDE-LDASCGGTTRP 3877
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3878 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3909
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFS-CGMGKCIPESWKC 224
P +CG + C+ L CD KPDC++ DE P +CN P ++ C +CI + KC
Sbjct: 2795 PYNFQCGDGS-CILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKC 2853
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2854 NHIDDC-GDGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESLAT 2911
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +V+C + CI LCD DC D DE ++ F N C
Sbjct: 2912 CPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2963
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2964 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2992
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 54/251 (21%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE--GPFCNAECTP-GQFSCGMGKCIPE 220
C + CG + +C+ +CDG+PDC +G DE C P G+F C C
Sbjct: 3627 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRP 3686
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW----------------- 263
CDG DC D SDE N C C +CA + +CIP +
Sbjct: 3687 FQICDGNDDC-GDSSDEQN-CDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADT 3744
Query: 264 LC-DEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQCALSK 301
LC E +C+ ++ N + + W + +C G +C+ S
Sbjct: 3745 LCMSAERNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSY 3804
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP+ C+ + DC DN+DED + + + V E RC +S +C+ CD
Sbjct: 3805 RCIPNWAFCNGQDDCR-----DNSDEDKQRCPTCDDV----GEFRCATSGKCIPRRWMCD 3855
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 3856 TENDCGDNSDE 3866
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L + LL ++ P +D R
Sbjct: 1554 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVM 1613
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +DY D +Y+ DS L+ ++ V D
Sbjct: 1614 FWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFIDFVNYD 1673
Query: 158 GS 159
GS
Sbjct: 1674 GS 1675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 16/192 (8%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
P F CG G CI CD DC + + PN C + +++CI C+
Sbjct: 2795 PYNFQCGDGSCILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKCN 2854
Query: 267 EEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D +DE D C G C+ + CI +CD DC + + D +
Sbjct: 2855 HIDDCG-----DGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDES 2908
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
+ C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2909 LATCPGL----PIDCRGVKVRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMNQ 2959
Query: 386 KCSHKCSPTPRG 397
+C+ P G
Sbjct: 2960 QCAQHYVRCPSG 2971
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 140/392 (35%), Gaps = 113/392 (28%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D + +F D L + G G R + + SS+V+ D LYW D +L V
Sbjct: 3490 DYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVV--FDDYLYWADWNLREV 3547
Query: 152 ESVRVD---GSHNAVLCH----PNELR-------------CGSSN--------------- 176
+R D G + +L PN+LR CG +N
Sbjct: 3548 --LRCDKWTGKNETILKKTVQLPNDLRIVHPMRQPAYPNPCGDNNGGCSHLCLIGAGGNG 3605
Query: 177 -------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
Q V LS +P+C+ + +A+C P + W CDG D
Sbjct: 3606 YTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIP------------KLWYCDGEPD 3653
Query: 230 CLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
C DGSDEP I C G+ QC + C +CD DC N D+ D
Sbjct: 3654 C-RDGSDEPGESICGQRICPVGEFQCT-NHNCTRPFQICDGNDDCGDSSDEQNCDKACDP 3711
Query: 287 FHQCFNGQVQCALSKKCIPHNW-----------------LC-DEEMDCSTDDIVDNTDED 328
+ +CA + +CIP + LC E +C+ ++ N ++
Sbjct: 3712 W------MFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCNNNKC 3765
Query: 329 WDKYFSHNA----------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
K + + + C RC SS +C+ FC+G+ DC + DE
Sbjct: 3766 IAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCRDNSDE 3825
Query: 373 G----PFCNNKADCENLKCSHKCSPTPRGAMC 400
P C+ D +C+ PR MC
Sbjct: 3826 DKQRCPTCD---DVGEFRCATSGKCIPRRWMC 3854
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G +R +V+++I P+++ +D+ +YW D + +E DG + V+
Sbjct: 2601 RIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVI 2658
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F +LE A M G NR LV + S +V+D +YW D ++ +ES+
Sbjct: 524 LRGEMFFTNQLKLEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 583
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 584 YQGNDRRIVAQ 594
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSHNA 162
L ++E A M G +R +V + P+S+ ID + + +YW D V++V +DGS
Sbjct: 4352 LHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERT 4411
Query: 163 VLCHPNEL 170
+ H +
Sbjct: 4412 TVVHDRHI 4419
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3476 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3513
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + +WD I+ D R +K A +G N + + + + +D+ LYW
Sbjct: 1513 NAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWV 1572
Query: 145 DSHLNTVESVRV-DGSHNAVLCHPN 168
DS LNT+E + D +L H N
Sbjct: 1573 DSSLNTIEVANLEDPKQRTLLVHQN 1597
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 8 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
G+ +CA S KCIP W+CD E DC DN+DE
Sbjct: 3837 GEFRCATSGKCIPRRWMCDTENDCG-----DNSDE 3866
>gi|432888040|ref|XP_004075037.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oryzias latipes]
Length = 2254
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 146/294 (49%), Gaps = 20/294 (6%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
RC ++ +CV + CDG+ DC++G DE C+ QF C G+C+ E+ +CDG+ DC
Sbjct: 1773 RCDNNTRCVPQTFLCDGERDCADGSDEEKCGLVPCSFYQFRCASGQCVSEALRCDGYPDC 1832
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
D SDE Q+QC S +C+ WLCD + DC N + K C
Sbjct: 1833 -SDRSDEAGCAKSPRCPAQLQCPHSHECLQKEWLCDGDEDCKDGSDEKNCNAPPAK---C 1888
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ Q C KCIP +W CD + DC D TDE +K C + +CG S
Sbjct: 1889 RDYQWPCRDGSKCIPLSWRCDGKEDCH-----DGTDE--EKCLQRK---CPSHLYQCG-S 1937
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCN--NKADCENLKCSHKCSPTPRGAMCFCPAG--Q 406
+C+ S C+G +C++ DEG C+ N + + C +C TPRG C+C AG
Sbjct: 1938 GECLDPSLVCNGLTNCADSSDEGVECSRHNCSSPSSPLCDQRCMSTPRGPRCYCTAGFKL 1997
Query: 407 NPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
P T CVDADEC + C +C NT SY C C G+ L PD KSC + P
Sbjct: 1998 QPGATFCVDADECSSAAAPCKHSCVNTRGSYTCRCHPGFYLEPDNKSCKTKDEP 2051
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 121/280 (43%), Gaps = 46/280 (16%)
Query: 191 CSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFN 247
C+ G+ G C G++ C G+CI E+W+CDG DCL DGSDE +C
Sbjct: 17 CTGGQRLG------CPEGKWQCDDGQCITEAWRCDGQGDCL-DGSDEMDCAELSGSECPA 69
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN-------TDEDWDKFHQCFNGQVQCALS 300
GQ C S C+ + CD ++ C T ++ D DW C NG
Sbjct: 70 GQFSCLDSVGCVNASARCDGKIQCPTGSDEESCPPTKGCIDSDW----MCQNG------- 118
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CIP C+ E DC +DN+DE VLC +CV+ + C
Sbjct: 119 -ICIPKGLRCNGENDC-----MDNSDEGDCGLCDEGGVLC--------PEGKCVSPEEMC 164
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADE 418
DG+ C +G DE C N CSH C+ G C CPAG + N C D +E
Sbjct: 165 DGQLHCLDGSDEPITCGRICSMNNGGCSHVCTDESWGTRCVCPAGYELSSNGAVCEDVNE 224
Query: 419 CLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C C NT SY+C C +G+ L +G C A+
Sbjct: 225 CSSALPPCAHYCKNTVGSYLCHCKKGFKLN-EGSICLALG 263
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 121/479 (25%), Positives = 183/479 (38%), Gaps = 106/479 (22%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
+ QC G C ++C+ ++ +CD E DC ED + E
Sbjct: 1458 VLQCRMGSRPCDDGRECVLYSHVCDGEEDCLDGSDEKGCQEDCKQG-------------E 1504
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
F + +C I + V R +C +D L+ W E+ + +
Sbjct: 1505 FQCAHGKMC-IPESEVCDGRPQCRDRSDELDCW-----------EKTKGCEFRCADGKRC 1552
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-LCHPNELRCGSSNQCVA 180
+ P + D D L D + GS +C + C S+ C++
Sbjct: 1553 I------PKKFLCDGEMDCLDGSDEMGCDSSPLEPTGSTVPTSVCAAPSVLCLGSSVCIS 1606
Query: 181 LSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCG-MGKCIPESWKCDGFVDCLEDGSDE- 237
+ CDG+ DC +G DE C +C + F C +C+ + CDG C DGSDE
Sbjct: 1607 QKQLCDGRRDCPDGSDE-ESCVFKCQNAEDFLCSDHRRCVSKIHVCDGRAHC-PDGSDEK 1664
Query: 238 --------PNTCIH---------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
P T I +C G C +C+ ++ +CD E DC D +
Sbjct: 1665 QCQTADLTPTTSISVPSVKTEPVKCRKGFKACKDGLECVMYSHVCDGEQDCK-----DGS 1719
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DED + C G+ QCA +CIP +CD + DC D +DE S C
Sbjct: 1720 DEDGCE-TLCKTGEFQCAHGNRCIPQKGVCDGQRDCQ-----DGSDE---MDCSSQIEGC 1770
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGED-----------------------EGPFCN 377
H RC ++ +CV + CDG+ DC++G D E C+
Sbjct: 1771 HH---RCDNNTRCVPQTFLCDGERDCADGSDEEKCGLVPCSFYQFRCASGQCVSEALRCD 1827
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCV------DADECLIDGSCDQTC 429
DC + C+ +PR CPA Q P+ +C+ D DE DGS ++ C
Sbjct: 1828 GYPDCSDRSDEAGCAKSPR-----CPAQLQCPHSHECLQKEWLCDGDEDCKDGSDEKNC 1881
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 123/288 (42%), Gaps = 43/288 (14%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
LN + + S N + C C +CV LS CDG+ DC +G DE +C
Sbjct: 1139 ELNCPSTAALPKSSNVLKCRLGSTLCRDGTECVLLSHICDGETDCKDGSDE-----EKCA 1193
Query: 207 PGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE---PNTC-------IHQCFNGQVQCALS 255
+F C C+ +S CDG CL DGSDE P+T + +C G C
Sbjct: 1194 --EFLCKDRLSCVLKSQVCDGRSHCL-DGSDELNCPSTAALPKSSNVLKCRLGSTLCRDG 1250
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+C+ + +CD E DC D +DE+ +C + +C ++C+P +CD
Sbjct: 1251 TECVLLSHICDGETDCK-----DGSDEE-----KCAD--FRCKDRRRCVPRRQVCDGRAQ 1298
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C N + + C C +CV S CDG+ DC +G DE
Sbjct: 1299 CHDGSDELNCVGEAPVAPKKADLKCRVGSRLCRDGTECVLFSHVCDGETDCQDGSDE--- 1355
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG 423
DC+ ++ + + TP+ + F P+ Q P+ C++ + L DG
Sbjct: 1356 ----EDCDEVE---RTAETPKPSCSF-PSVQCPDSAVCINPAQ-LCDG 1394
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 126/334 (37%), Gaps = 62/334 (18%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
LN + + S N + C C +CV LS CDG+ DC +G DE + C
Sbjct: 1222 ELNCPSTAALPKSSNVLKCRLGSTLCRDGTECVLLSHICDGETDCKDGSDEEKCADFRCK 1281
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSK 256
+ +C+P CDG C DGSDE P +C G C
Sbjct: 1282 DRR------RCVPRRQVCDGRAQC-HDGSDELNCVGEAPVAPKKADLKCRVGSRLCRDGT 1334
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKFHQ--------CFNGQVQCALSKKCIPHN 307
+C+ + +CD E DC D +D ED D+ + C VQC S CI
Sbjct: 1335 ECVLFSHVCDGETDCQ-----DGSDEEDCDEVERTAETPKPSCSFPSVQCPDSAVCINPA 1389
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
LCD DC D +DE K + + + C CV+ S CDG+ C
Sbjct: 1390 QLCDGIRDCP-----DGSDEACVKNCADES------DFLCKDRRSCVSKSLLCDGRSHCY 1438
Query: 368 NGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCV------DADEC 419
+G DE C + +P + + C G P + +CV D +E
Sbjct: 1439 DGSDEA------------NCRTEAAPESKSEVLQCRMGSRPCDDGRECVLYSHVCDGEED 1486
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+DGS ++ C C G P+ + C
Sbjct: 1487 CLDGSDEKGCQEDCKQGEFQCAHGKMCIPESEVC 1520
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 199/525 (37%), Gaps = 118/525 (22%)
Query: 47 YFKRILNGT---HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLN---------SW 94
Y KR+ + T H L L++ L ++++ + S+ L + LL S+
Sbjct: 654 YPKRLYHTTLEIHNLYLDW--LRSKLFWMEEDRLYSMDLTGGKAELLLKIAEGVRGDISF 711
Query: 95 DLPAPEIFPLDER------LEKAGMHGENRSPLVTKNIQ--WPSSLVIDYNQDILYWCDS 146
DL A + ER L K H + V+ ++ + L+ + I W
Sbjct: 712 DLRASSLHWSSERGLVTLSLLKETTHQAGKRWNVSGSVMAAFEPFLLSLSDHVITLWNRR 771
Query: 147 HLNTVESVRVDGSHNAVL--------------CHPNELRCGSSNQCVALSKFCDGKPDCS 192
+ + ++ V+V G +V+ C + C S+ C+ S+ CDGK DC
Sbjct: 772 NGSIIQDVKVKGHVLSVIPALGNIKTVPDPPVCKEPSMLCRHSSICLPNSQVCDGKRDCP 831
Query: 193 NGEDEGPFCNAEC-TPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDE----------PNT 240
+G+DE FC C + G+F C + CI +S CDG C DGSDE P
Sbjct: 832 DGDDE-EFCVVTCPSKGEFKCKDRRFCISQSLVCDGRSHC-RDGSDEVDCPTLVAPVPLK 889
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWD----KFHQCFNGQ 294
+ +C G C +C+ + +CD E DC +D++ TD C +
Sbjct: 890 NVLKCQMGSKACNDGTECVLLSHVCDGEQDCRDGSDELGCETDAPPSTRPPAVPACISPS 949
Query: 295 VQCALS----------------------------KKCIPH-NWLCDEEMDCSTDDIV--- 322
V C + +KC+ ++LC + C + +V
Sbjct: 950 VLCPSTSTHICISQSQFCNGVKDCPDGFDEKSCLEKCVSRTDFLCKDRRSCVSKILVCDG 1009
Query: 323 -----DNTDE-----DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + + + C C +CV LS CDG+ DC +G DE
Sbjct: 1010 RSHCHDGSDEVNCASEGPQAPQKPKLKCRFGSKLCRDGAECVLLSHVCDGEADCQDGSDE 1069
Query: 373 GP--FCNNKADCENLKCSHKCSP--TPRGAMCFCPAGQNPNKTQCVDADECL-------- 420
KA ++L P TP A C P+ P + C D C+
Sbjct: 1070 EQCDVAETKAAEKDLNIPPPIIPSATPTKAACSSPSVLCPAEFLCKDRLSCVLKNQVCDG 1129
Query: 421 ----IDGSCDQTCTNTHL----SYVCSCTEGYTLRPDGKSCTAVN 457
+DGS + C +T S V C G TL DG C ++
Sbjct: 1130 RSHCLDGSDELNCPSTAALPKSSNVLKCRLGSTLCRDGTECVLLS 1174
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 100/246 (40%), Gaps = 38/246 (15%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
LN V V + C C +CV S CDG+ DC +G DE E T
Sbjct: 1305 ELNCVGEAPVAPKKADLKCRVGSRLCRDGTECVLFSHVCDGETDCQDGSDEEDCDEVERT 1364
Query: 207 P--GQFSCGM--------GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALS 255
+ SC CI + CDG DC DGSDE C+ C + C
Sbjct: 1365 AETPKPSCSFPSVQCPDSAVCINPAQLCDGIRDC-PDGSDE--ACVKNCADESDFLCKDR 1421
Query: 256 KKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
+ C+ + LCD +E +C T+ ++ E QC G C ++C+ +
Sbjct: 1422 RSCVSKSLLCDGRSHCYDGSDEANCRTEAAPESKSE----VLQCRMGSRPCDDGRECVLY 1477
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+ +CD E DC +D +DE K + C E +C C+ S+ CDG+P C
Sbjct: 1478 SHVCDGEEDC-----LDGSDE---KGCQED---CKQGEFQCAHGKMCIPESEVCDGRPQC 1526
Query: 367 SNGEDE 372
+ DE
Sbjct: 1527 RDRSDE 1532
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 96/248 (38%), Gaps = 23/248 (9%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C G+ QCA +CIP +CD + DC + + R N T + F
Sbjct: 1728 CKTGEFQCAHGNRCIPQKGVCDGQRDCQDGSDEMDCSSQIEGCHHRCDNNTRCVPQTFLC 1787
Query: 65 RNQSLCFIQQQN-------VSSVRLRCAQ---INDLLNSWDLPAPEIFPLDERLEKAGMH 114
+ C S + RCA +++ L P +R ++AG
Sbjct: 1788 DGERDCADGSDEEKCGLVPCSFYQFRCASGQCVSEALRCDGYP-----DCSDRSDEAGCA 1842
Query: 115 GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCG 173
+SP +Q P S + + CD + + S + + C + C
Sbjct: 1843 ---KSPRCPAQLQCPHSHECLQKE---WLCDGDEDCKDGSDEKNCNAPPAKCRDYQWPCR 1896
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++C+ LS CDGK DC +G DE +C + CG G+C+ S C+G +C D
Sbjct: 1897 DGSKCIPLSWRCDGKEDCHDGTDEEKCLQRKCPSHLYQCGSGECLDPSLVCNGLTNC-AD 1955
Query: 234 GSDEPNTC 241
SDE C
Sbjct: 1956 SSDEGVEC 1963
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+++++GM G R LV+ N+ WP SL D D +YW D L+ + S +DG
Sbjct: 2192 QIKRSGMDGSKRKVLVSHNLSWPVSLAYDLLDDRVYWADEKLHCIGSSSLDG 2243
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 10/119 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C + C S CV S CDGK C G DE + C + C G CIP+ +
Sbjct: 67 CPAGQFSCLDSVGCVNASARCDGKIQCPTGSDEESCPPTKGCIDSDWMCQNGICIPKGLR 126
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G DC+ D SDE + + C G V C KC+ +CD ++ C +D +DE
Sbjct: 127 CNGENDCM-DNSDEGDCGL--CDEGGVLCP-EGKCVSPEEMCDGQLHC-----LDGSDE 176
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 40/100 (40%), Gaps = 18/100 (18%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C P LRC N DC + DEG C G C GKC+
Sbjct: 119 ICIPKGLRCNGEN-------------DCMDNSDEGDC--GLCDEGGVLCPEGKCVSPEEM 163
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
CDG + CL DGSDEP TC C C S C +W
Sbjct: 164 CDGQLHCL-DGSDEPITCGRICSMNNGGC--SHVCTDESW 200
>gi|348519841|ref|XP_003447438.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Oreochromis niloticus]
Length = 4657
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 119/366 (32%), Positives = 162/366 (44%), Gaps = 67/366 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPES 221
V C + +C S +C+ CD + DC +G DE C CT GQFSC G CIP
Sbjct: 40 VTCDSSHFQCLSDGECIPNLWVCDDEEDCEDGSDERQHCPGRTCTSGQFSCSNGACIPGE 99
Query: 222 WKCDGFVDCLE------------------------------------DGSDEPNTCIHQC 245
++CD DC + DGSDE N C +C
Sbjct: 100 YQCDRLADCSDGSDERNCHYPECTQLRCANGACYNRTQRCDQILDCRDGSDEAN-CTQRC 158
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
G C + C+P ++CD + DC D +DE + C C S +CI
Sbjct: 159 NAGLFSCH-NGMCVPQRYVCDHDDDCG-----DRSDELNCTYPTCRGNYFTCP-SGRCIH 211
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
WLCD E DC DN DE K + C+P E C SS C+ L K CDG P+
Sbjct: 212 QVWLCDGEDDCE-----DNADE---KGCDNVQRECYPGEWPCPSSGLCIPLDKLCDGMPN 263
Query: 366 CSNGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADE 418
C +GEDE + C +L C H C +P G C CP+G + N C+D D+
Sbjct: 264 CPDGEDETNTTAGRNCSIWRCASLSCEHHCHASPDGGTCSCPSGYIVNSNNSRTCIDFDD 323
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG--KSCTAVNVPQDEPASIIFSSTVDIRR 476
C + G CDQ C + S+ CSC EGY L ++ ++ VP S+IFS+ D+
Sbjct: 324 CSMWGVCDQLCEDRIGSHRCSCREGYILEQHRYCRADSSTGVP-----SLIFSNGRDLLI 378
Query: 477 IHLNGS 482
++G+
Sbjct: 379 GDIHGN 384
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 147/317 (46%), Gaps = 45/317 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
CHP + +C ++C+ + CDG DC +G DE C CT +F C G +CI ++
Sbjct: 1121 CHPGQFQC-PDHRCIDPNYVCDGDRDCVDGADE-QGCIYNCTMNEFKCSRGHQCINSYYR 1178
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE P C H+ + QC CIP +W CD DC
Sbjct: 1179 CDGVFDC-SDRSDEQNCPTRPPGMCHHE---SEFQCQSDGSCIPSSWECDGHPDCE---- 1230
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE H C +L + C+ +W+CD + DC D+ D D +
Sbjct: 1231 -DGSDE----HHACPPRTCPSSLFRCDNGNCVLRSWICDGDNDCR--DMSDERDCPTPPF 1283
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCE--NLK 386
C + +C + C+ L+ CD PDC NG DE P CN ++ C N
Sbjct: 1284 ------RCPSWQWQCPGHSVCINLTTVCDNTPDCPNGADESPLCNEPLPDQESCSDNNAG 1337
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C+H C P GA C CP G N +KT C D DEC G C Q C N S+ C C +G
Sbjct: 1338 CTHGCIQGPFGAQCTCPVGYQLSNDSKT-CEDIDECNPPGLCSQHCFNERGSFRCHCQDG 1396
Query: 444 YTLRPDGKSCTAVNVPQ 460
YTL D ++C A + Q
Sbjct: 1397 YTLEADQRTCKASDSRQ 1413
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 167/409 (40%), Gaps = 104/409 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C P + +C S+N C+ S CDG DC + DE P AE C+ +F C G+CIP W
Sbjct: 2824 CQPEQTKCQSTNICIPRSYLCDGDNDCGDMSDESPTHCAESTCSQSEFRCSSGRCIPAHW 2883
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQC--------------------------- 252
CDG DC DGSDEP +C I C Q +C
Sbjct: 2884 YCDGGADC-SDGSDEPLSCTTLIRTCNTDQFRCDDGRCIASSWICDGDNDCGDMSDEDQR 2942
Query: 253 -------------------ALSKKCIPHNWLCDEEMDCS--------------------- 272
+KCIP +W+CD + DC+
Sbjct: 2943 HNCANRTCSSAEFTCVNNRPPQRKCIPRDWVCDGDADCADALDERQNCTRRSCSINEFTC 3002
Query: 273 --------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+D D++DE + C Q C + +C+ +++CD + DC
Sbjct: 3003 NNGLCIRSSYRCDRRNDCGDSSDEQGCTYQPCQQHQFTCQ-NGRCVSRDFVCDGDNDCG- 3060
Query: 319 DDIVDNTDEDWDKYFSHN-AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC 376
D +DE ++ H A C P +C + C++LS+ CD DCS+ DE G
Sbjct: 3061 ----DESDEL--EHMCHTPAPTCPPGNFKC-ENGHCISLSQVCDRSDDCSDNSDEKGCGI 3113
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTH 433
N D C H C+ TP +C C G + C D DEC S C Q C NT
Sbjct: 3114 NECTDPSIHHCDHNCTDTPTSFICTCRPGYRLMSDGKTCDDVDECTETPSVCSQLCENTV 3173
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
S++C C+ G+ PDG+SC + + +IFS+ +R + +G+
Sbjct: 3174 GSHMCKCSPGFLREPDGRSCRQNS---NISPYLIFSNRYYLRNLSTDGA 3219
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 148/328 (45%), Gaps = 28/328 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F CG G CI E +KC
Sbjct: 3760 CTESEYRC-DNLRCIPDRWVCDHDNDCEDNSDERDCELRTCHPGYFQCGSGHCIAERFKC 3818
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQV--QCALSKK---CIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D +DE +C + NG Q K C+P +W CD + DC DN
Sbjct: 3819 DGNADCL-DYTDE-TSCPTRYPNGTYCPQFMFECKNHICVPPHWKCDGDNDCG-----DN 3871
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H C + Q + C + + E+ S DD D +DE +
Sbjct: 3872 SDEE---LHLCLDIQCEAPFRFHCDNNRCIYSHELCNSVDDCGDGSDERQENCQKPTHGP 3928
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSP-TPRG 397
C +E +C S+ QC+ L CD DC + DE G + C C H C+ T G
Sbjct: 3929 CTDDEYKC-SNGQCIPLQYACDDYDDCGDQSDELGCHQTSGHSCSANICEHNCTDLTGGG 3987
Query: 398 AMCFCPAGQNPNKTQ---CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL--RPDGKS 452
+C C G P T+ C D +EC + G+C Q C NT SY C C +G+ P G
Sbjct: 3988 FLCSCRPGYKPKSTERHNCEDVNECEVYGTCPQDCKNTKGSYECFCADGFLSFGEPHGTE 4047
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A Q P ++ V IRR +L+
Sbjct: 4048 CAA----QGNPPVMLLPDNVRIRRYNLS 4071
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 106/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + RC ++ +C+ + CDG+ DC +G DE C + C GQF C G C +
Sbjct: 3512 MCTSTQYRCANNERCIPIWWKCDGQADCRDGSDEPSTCPSRHCRLGQFQCNDGNCTSPHF 3571
Query: 223 KCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H C + Q QCA +K+CIP +W CD E DC D +
Sbjct: 3572 LCNANQDC-HDGSDEDAVLCATHMCESHQWQCA-NKRCIPESWQCDGEDDCG-----DQS 3624
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC DN+DE ++
Sbjct: 3625 DEDPAHCSSRTCRPGQFKCR-NGRCIPQSWKCDVDDDCG-----DNSDEPLEECMGPGYR 3678
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +CV L C+G DC + DE
Sbjct: 3679 CDNHTEFACRTNYRCVPLWSVCNGHNDCRDNSDE 3712
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 136/340 (40%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S ++T I+WP+ + IDY D LYW D+H
Sbjct: 3347 IGRVGMDGTNKSAIITTKIEWPNGITIDYTNDRLYWSDAHLNYIEYSDLDGQHRHTVYDG 3406
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNELRCG 173
TVE + DGS VL HP
Sbjct: 3407 DLPHPFALTVFEDTVYWTDWNTRTVEKGNKYDGSGRQVLVNTTHRPFDIHVYHPYRQPI- 3465
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEG----------------PFCNAECTPGQFSCGMG-K 216
+N C + C +G E C CT Q+ C +
Sbjct: 3466 VNNPCAVNNGGCSHLCLIRHGGREHTCECPDHFLTIQIGGVTRCLPMCTSTQYRCANNER 3525
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP WKCDG DC DGSDEP+TC C GQ QC PH +LC+ DC
Sbjct: 3526 CIPIWWKCDGQADC-RDGSDEPSTCPSRHCRLGQFQCNDGNCTSPH-FLCNANQDCH--- 3580
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DED H C + Q QCA +K+CIP +W CD E DC D +DED
Sbjct: 3581 --DGSDEDAVLCATHMCESHQWQCA-NKRCIPESWQCDGEDDCG-----DQSDED----P 3628
Query: 334 SH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H ++ C P + +C + +C+ S CD DC + DE
Sbjct: 3629 AHCSSRTCRPGQFKC-RNGRCIPQSWKCDVDDDCGDNSDE 3667
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 106/221 (47%), Gaps = 21/221 (9%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKC 217
N C P+ C ++ +CV CDG+ DC + DE C QF+C +C
Sbjct: 1035 NNTTCSPSAFTC-ANQRCVPAGWRCDGQNDCFDNSDEINCPTHVPGTCPANQFTCANHRC 1093
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP +W+CD DC+ DGSDE + + + C GQ QC +CI N++CD + DC
Sbjct: 1094 IPHTWRCDTDNDCV-DGSDEVDCNLGNTCHPGQFQCP-DHRCIDPNYVCDGDRDC----- 1146
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VD DE + C + +C+ +CI + CD DCS D +DE +
Sbjct: 1147 VDGADEQ-GCIYNCTMNEFKCSRGHQCINSYYRCDGVFDCS-----DRSDE--QNCPTRP 1198
Query: 337 AVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+C H +E +C S C+ S CDG PDC +G DE C
Sbjct: 1199 PGMCHHESEFQCQSDGSCIPSSWECDGHPDCEDGSDEHHAC 1239
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPH 261
+C FSCG GKCIP S++CDG DC D SDE N I+ C CA +++C+P
Sbjct: 997 QCGANSFSCGNGKCIPNSYRCDGVDDC-HDNSDEVNCGINNTTCSPSAFTCA-NQRCVPA 1054
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD + DC DN+DE H C Q CA + +CIPH W CD + DC
Sbjct: 1055 GWRCDGQNDC-----FDNSDEINCPTHVPGTCPANQFTCA-NHRCIPHTWRCDTDNDC-- 1106
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
VD +DE + CHP + +C ++C+ + CDG DC +G DE
Sbjct: 1107 ---VDGSDE----VDCNLGNTCHPGQFQC-PDHRCIDPNYVCDGDRDCVDGADE 1152
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 113/253 (44%), Gaps = 44/253 (17%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQF CG G+CIP W CDG DC++D SDE + C + QC +CIP+ W+
Sbjct: 3 CELGQFRCGTGRCIPGDWHCDGTSDCVDD-SDEHDCPQVTCDSSHFQCLSDGECIPNLWV 61
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD+E DC D +DE C +GQ C+ + CIP + CD DCS D
Sbjct: 62 CDDEEDCE-----DGSDERQHCPGRTCTSGQFSCS-NGACIPGEYQCDRLADCS-----D 110
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GP 374
+DE N +LRC ++ C ++ CD DC +G DE G
Sbjct: 111 GSDE-------RNCHYPECTQLRC-ANGACYNRTQRCDQILDCRDGSDEANCTQRCNAGL 162
Query: 375 F-------------CNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNKTQCVDADECL 420
F C++ DC + C+ PT RG CP+G+ ++ D ++
Sbjct: 163 FSCHNGMCVPQRYVCDHDDDCGDRSDELNCTYPTCRGNYFTCPSGRCIHQVWLCDGEDDC 222
Query: 421 IDGSCDQTCTNTH 433
D + ++ C N
Sbjct: 223 EDNADEKGCDNVQ 235
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 99/229 (43%), Gaps = 29/229 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPES 221
C PN ++ +C+A C+G +C NG + C C P Q C CIP S
Sbjct: 2782 CDPNTEFACNNGRCIAKDYVCNGINNCYDNGTSDEQNCPERTCQPEQTKCQSTNICIPRS 2841
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CDG DC + + P C C + +C+ S +CIP +W CD DCS D +
Sbjct: 2842 YLCDGDNDCGDMSDESPTHCAESTCSQSEFRCS-SGRCIPAHWYCDGGADCS-----DGS 2895
Query: 281 DEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DE C Q +C +CI +W+CD + DC D +DED HN
Sbjct: 2896 DEPLSCTTLIRTCNTDQFRCD-DGRCIASSWICDGDNDCG-----DMSDEDQ----RHNC 2945
Query: 338 V--LCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C E C ++ +C+ CDG DC++ DE C ++
Sbjct: 2946 ANRTCSSAEFTCVNNRPPQRKCIPRDWVCDGDADCADALDERQNCTRRS 2994
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 123/319 (38%), Gaps = 65/319 (20%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVI--------DYNQDILYWCDSHLNTVESVRVD 157
+++E++ + G NR +V+ I +P ++ + D+N +Y + H + + V +
Sbjct: 2555 QKIERSSLTGSNREVIVSTAI-YPFAMTMFGQFIYWTDWNTRSIYRANKHDGSDQRVMIQ 2613
Query: 158 GSHNA-----VLCHPNELRCGSSNQCV--ALSKFCDGKPDCSNGE--DEG---------- 198
+ VL + +C S Q S C P+ + + EG
Sbjct: 2614 NLPSRPMDIHVLAGRKQQQCDSPCQQFNGGCSHICTPGPNGAECQCPSEGRWYLADNKHC 2673
Query: 199 -PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---------------- 241
P C PGQF+C G+CI WKCD DC + + C
Sbjct: 2674 IPDNGTRCQPGQFACMNGRCIRAQWKCDNDDDCGDGSDELERVCGRCSQXSXIFPQLLSS 2733
Query: 242 ------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
H C C + +C+P+++ CD DC DN+DE F C
Sbjct: 2734 FIALSAFHTCEPTVFTCG-NGRCVPYHYRCDHYDDCR-----DNSDEVGCLFRPCDPNTE 2787
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+ +CI +++C+ +C DN D C P + +C S+N C+
Sbjct: 2788 FACNNGRCIAKDYVCNGINNC-----YDNGTSDEQNCPERT---CQPEQTKCQSTNICIP 2839
Query: 356 LSKFCDGKPDCSNGEDEGP 374
S CDG DC + DE P
Sbjct: 2840 RSYLCDGDNDCGDMSDESP 2858
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTK-NIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E A M G++R LV K ++ WP+ L +DY N + +YWCDS N +ES++ DG+ ++
Sbjct: 4210 RIESAWMDGQHRQVLVQKEDLGWPTGLTVDYLNGNRIYWCDSKENIIESMKPDGTDRRIV 4269
Query: 165 C-----HPNEL 170
HP L
Sbjct: 4270 ISGDIGHPYSL 4280
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
LE+A M G NR +++ + WP+ + +D +YW DS + +E+ DG H + H
Sbjct: 510 LERAFMDGTNRYGIISSKLGWPAGITLDIEAKRVYWVDSRYDYIETATYDGLHRKTVVH 568
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
W Y +L L+ HR + +NV++ R + D +S L +
Sbjct: 1503 WTDY---VLETIEVSKLDGTHRT----VLVSENVTNPR---GLVLDPRDSAHLMFWTDWG 1552
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG----- 158
+ R+E+A M G+ R+ +++ + WP+ L IDY ++LY+ D++L+ ++ +G
Sbjct: 1553 RNPRIERASMDGKQRTVIISSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQ 1612
Query: 159 --SHNAVLCHPNEL 170
+ + VL HP+ +
Sbjct: 1613 VLASDLVLQHPHAI 1626
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G R +V ++ WP+ L +DY ++ LYW D+ L +E + GS+ V+
Sbjct: 2513 KIERATLGGNFRIEIVNSSLVWPNGLTLDYEEERLYWADASLQKIERSSLTGSNREVI 2570
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEI-------- 101
NG +A+++ N F+ + V + L LL + D+P I
Sbjct: 2123 NGIRGIAVDWVAGNLYFTNAFLTETYVEVLHLNTTFRRVLLKTQVDMPRHIIVDPRNRYL 2182
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ + ++E+A + G NR+ LV+ I P L +D+ +YW D L+ + V
Sbjct: 2183 FWADYGQNPKIERALLDGTNRTVLVSSGIITPRGLALDFQTGYVYWVDDSLDMIARVSPQ 2242
Query: 158 GSHNAVL 164
G ++
Sbjct: 2243 GGETEIV 2249
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ A +G +R + + SL +D+ LYW D L T+E ++DG+H VL
Sbjct: 1466 DRIWSAHKNGSDRVVIFDSGVTVTESLAVDWVGRNLYWTDYVLETIEVSKLDGTHRTVLV 1525
Query: 166 HPN 168
N
Sbjct: 1526 SEN 1528
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVLC 165
R+E A + G R L+ ++ P+++V++ + ++YW D N +ES +DG H VL
Sbjct: 4166 RIEVAKLDGRYRKWLIHTDLDQPAAIVVNPSLGMMYWTDWGRNPRIESAWMDGQHRQVLV 4225
Query: 166 HPNEL 170
+L
Sbjct: 4226 QKEDL 4230
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 419 CLID-GSCDQTCTNTH------LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C +D G C+Q C +H L Y C C GY L DGK C AV ++FSS
Sbjct: 635 CSVDRGGCEQICVLSHRSDNGGLGYRCKCRMGYDLHADGKRCLAVR------QFLLFSSQ 688
Query: 472 VDIRRIHLNGS 482
+ IR I N S
Sbjct: 689 LAIRGIPFNLS 699
>gi|198471567|ref|XP_001355664.2| GA11430 [Drosophila pseudoobscura pseudoobscura]
gi|198145975|gb|EAL32723.2| GA11430 [Drosophila pseudoobscura pseudoobscura]
Length = 4543
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/309 (36%), Positives = 152/309 (49%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1043 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPISCLTNQFKCSDLRQCVEESYK 1102
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 1103 CDGIPDC-NDGSDEVGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 1156
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1157 SDE-----QDC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGAEHAC 1204
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHK 390
C + +C G S +CV ++ CD PDC NG DEG C+ A+CE+ +CS
Sbjct: 1205 VPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDCPNGADEGEGCD-LAECEHQTGQCSSF 1263
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + C D +EC G C Q CTNT SY CSC +GY L P
Sbjct: 1264 CQKTPNGALCVCPPGSEIGDDGFTCNDTNECDPPGLCSQQCTNTKGSYFCSCQDGYVLEP 1323
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1324 NKHTCKAVN 1332
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/292 (36%), Positives = 144/292 (49%), Gaps = 31/292 (10%)
Query: 200 FCNAE--CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
FCNA P + + G C+P+ +CDG++DC G DE C Q +CA K
Sbjct: 21 FCNAPNGAAPAEGTRLAGPCVPKEKRCDGYLDC-RTGRDEDGCNGVACRLDQFRCANGHK 79
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CI C+ DC DN+DE F C + Q +C + CIP+N+ CD DC+
Sbjct: 80 CIDAALKCNHRDDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA 133
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDCSNGEDE 372
D +DE + A+ C N+ C G N +C+ S+ CDGK DC +G DE
Sbjct: 134 -----DKSDE-----ANCTAIACPDNKFLCPRGGVNGAPKCILKSQLCDGKRDCEDGSDE 183
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCT 430
C+ A C L C KC P+ G +C+C GQ+ P+ CVD DEC G CDQ CT
Sbjct: 184 ETNCS-IASCPALSCEFKCGPSLTGGVCYCRPGQSLAPDNRTCVDLDECAEWGHCDQLCT 242
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
NT SY C C +GYTL + K C A P +IF+ I R+ +G+
Sbjct: 243 NTLGSYTCQCAQGYTLINESK-CIA---PNANNLQLIFAHDRAIMRMFAHGA 290
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 148/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2723 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2782
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2783 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2836
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2837 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2889
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2890 TTLHNCATQQPCGEDMFTCGNG-RCINKGWLCDHDNDCGDGTDEGKFCNSKYKTCSPQEF 2948
Query: 382 -CENLKC--------------SHKCSPTPRGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC H + CP GQ QC+D
Sbjct: 2949 TCQNFKCIRNQYRCDGEDDCGDHSDEVNCKKDNVTCPQGQFACTNGQCIDYSLVCNKYPD 3008
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
DEC + C C +T SY C C EGY L DGK+C V+ +
Sbjct: 3009 CSDESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLE 3068
Query: 462 EPAS 465
+P +
Sbjct: 3069 QPGA 3072
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2808 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2863
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI WLC
Sbjct: 2864 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWLC 2920
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + + CD E DC
Sbjct: 2921 DHDNDCG-----DGTDEGKFCNSKYKTCSPQEFTCQ-NFKCIRNQYRCDGEDDCG----- 2969
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE K + V C + C ++ QC+ S C+ PDCS+ DE CN A
Sbjct: 2970 DHSDEVNCK---KDNVTCPQGQFAC-TNGQCIDYSLVCNKYPDCSDESDEPAHCNVDECA 3025
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYV 437
E +C HKC T C C G + C D DECL G+C Q C+NT S+
Sbjct: 3026 KVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGSFY 3085
Query: 438 CSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + + P +IF++ +R + ++G
Sbjct: 3086 CKCDETYYERQNDEHTCKRKD---NIPPWLIFTNKYYVRNMSVDG 3127
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 158/372 (42%), Gaps = 81/372 (21%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3647 DFKCGN-NRCIPKQWMCDFADDCGDATDENEAICKGRYRECSESEFRCGNGKCISSRWQC 3705
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 3706 DHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVGCPPRF 3763
Query: 272 --------------------------STDDIVDNTDEDWD---KFHQCFNGQVQCALSKK 302
TDD D +DED + F+ + QCA + +
Sbjct: 3764 PGGRYCPESRFQCNNNLCVSLSDLCDGTDDCGDGSDEDPNVCSDFNCDTLRRFQCA-NHR 3822
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CVA 355
C+ +CD D+ D +DE+ N LC + C Q C+
Sbjct: 3823 CVARYQICD-----GVDNCGDGSDEN-------NMTLCASKQKPCDLYTQFQCANKHCIE 3870
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QNP 408
S+ CD DC++ DE C++ A C C H C + T G +C C G +
Sbjct: 3871 RSQVCDFSDDCTDASDE-LGCHHTASCSEQNRGGCQHHCHNLTDGGYICTCYPGYIISHD 3929
Query: 409 NKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E ++
Sbjct: 3930 NKKRCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFRL-ADGAS--GVCRAEKEDVVLV 3986
Query: 468 FSSTVDIRRIHL 479
F++ +IR + L
Sbjct: 3987 FANGQEIRGLDL 3998
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +C+ S CDG DC + DE C C +F C G+CIP++++CD DC
Sbjct: 932 TNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCRSGRCIPQNFRCDQENDC-G 990
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCF 291
D SDE + C Q CA + +CIP+ W CD E DC D++DE D+ C
Sbjct: 991 DNSDELDCGNVTCGTSQFACA-NGRCIPNMWKCDSENDCG-----DSSDEGDFCAEKTCA 1044
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q C + CIP +W+CD + DC D DE + C N+ +C
Sbjct: 1045 YFQFTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK-----DCPPISCLTNQFKCSDLR 1094
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
QCV S CDG PDC++G DE
Sbjct: 1095 QCVEESYKCDGIPDCNDGSDE 1115
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV I +P ++ + N +YW D L V N V
Sbjct: 2472 VREKIERSDLEGRNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 2528
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R S+ N C + C +GK +C + +E
Sbjct: 2529 EMVKRLEDSPRDIRIYSADRQKCDVNPCRINNGGCAQSCHPAPNGKAECKCDDNTKVVNE 2588
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 2589 GRMCAPRNNTCEASKFYCQNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2648
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ C + +CIP +C+
Sbjct: 2649 -NGRCIFKSWKCDHENDCK-----DGSDELGCTYPPCVDGEFTCG-NGRCIPQAQVCNGV 2701
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2702 NDCKDNATSDETHERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2756
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2757 PLHCGQRTCPTNSFRCPNHRCIPA 2780
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFS 211
R D + + C ++ +C SS +C+ S CDG DC +G DE P C P +F+
Sbjct: 3506 RSDEQNCELPCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFA 3565
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDE 267
C G+CIP+ W CD DC +D SDEP Q C G +C + +CIP CD
Sbjct: 3566 CKNGRCIPQLWMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDG 3624
Query: 268 EMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC DN+DE + +C +C + +CIP W+CD DC D TD
Sbjct: 3625 KDDCR-----DNSDELPENCPKCSAETDFKCG-NNRCIPKQWMCDFADDCG-----DATD 3673
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ + C +E RCG+ +C++ CD + DC + DE
Sbjct: 3674 EN-EAICKGRYRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3717
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3445 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3503
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 3504 GDRSDEQN-CELPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 3557
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + A + +CIP W+CD + DC D++DE N C RC G
Sbjct: 3558 CDPKTEFACKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 3609
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEGP 374
SN +C+ FCDGK DC + DE P
Sbjct: 3610 QSNYRCIPKWLFCDGKDDCRDNSDELP 3636
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 112/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+CG G+CIP++ C
Sbjct: 2640 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCTYPPCVDGEFTCGNGRCIPQAQVC 2698
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2699 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2753
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2754 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2813
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2814 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2866
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2867 AQCIPKKWICDGDPDCVDGADENTTLHN 2894
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 125/319 (39%), Gaps = 61/319 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVL-- 164
+ A + G +R +++ N + P + D +YW D +L V + + G++ VL
Sbjct: 3299 IAYADLEGRHRHTVLSGN-RVPHVFALSLFDDFIYWSDWNLKAIVRANKFHGANYTVLRN 3357
Query: 165 -------CHPNE-LR-------CGSSNQCVALSKFCDGKPDCSNGEDEGPF--------- 200
H N LR CG++N + P+ + EG
Sbjct: 3358 TTHRPYDIHINHPLRQLPYTNPCGTNNGGCSHLCLIAPPPESTYLNIEGYIEEGAPIYKC 3417
Query: 201 --------------CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-H 243
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC
Sbjct: 3418 ACPNQFYLARDSKTCIANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPR 3476
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C G QC + C P +CD DD D +DE + C +C S +C
Sbjct: 3477 HCRAGTFQCK-NTNCTPSATICD-----GVDDCGDRSDEQNCEL-PCPLSDFKCKSSGRC 3529
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I +W CD + DC D +DED F C P + +C+ CD
Sbjct: 3530 ILDSWRCDGDADCK-----DGSDEDPAVCFKRT---CDPKTEFACKNGRCIPQLWMCDFD 3581
Query: 364 PDCSNGEDEGPFCNNKADC 382
DC + DE + + +C
Sbjct: 3582 NDCGDDSDEPAYMCRQRNC 3600
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 4135 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSMRKAIV 4194
Query: 166 HPNELR 171
++LR
Sbjct: 4195 KGDQLR 4200
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA 162
L + ++ A + G + + ++ ++ P S+VI + D +Y D L+ + + ++ G
Sbjct: 769 LLDHVQHANLDGTDIKTVNSRLVRHPFSIVI--HNDWMYITDWRLDAIIRLHKLTGEQEE 826
Query: 163 VLCH-PNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIP 219
++ P R G + + D +P N C A P + G + P
Sbjct: 827 MMVREPQTNRLYGVKVYSHEVQRIADTQPCNRNNGGCQKICFAVPIAPQNATAGGAEIAP 886
Query: 220 ESWKCDGF-------------VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+ + C+ D S EP + C N +++CIP +W+CD
Sbjct: 887 SVGRLQARCSCPYGERLAEDQMSCVPDPSAEPP--VQPCPNSWDFTCTNQRCIPKSWVCD 944
Query: 267 EEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ DC +DN+DE+ + C + + QC S +CIP N+ CD+E DC DN+
Sbjct: 945 GDDDC-----LDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQENDCG-----DNS 993
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DE V C ++ C ++ +C+ CD + DC + DEG FC K
Sbjct: 994 DE-----LDCGNVTCGTSQFAC-ANGRCIPNMWKCDSENDCGDSSDEGDFCAEKT 1042
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ DG N V C ++ RC + ++C+ + C+ + DC + DE
Sbjct: 47 CDGYLDCRTGRDEDGC-NGVACRLDQFRCANGHKCIDAALKCNHRDDCGDNSDEQGCNFP 105
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + KC
Sbjct: 106 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKFLCPRGGVNGAPKC 164
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 165 ILKSQLCDGKRDCE-----DGSDEE 184
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 3431 TCIANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 3485
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 3486 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCELPCPLSDFKCKSSGRCILDS 3533
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 3534 WRCDGDADCKDGSDEDPAVCFKRTCD 3559
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3250 LQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 3309
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
+ N + ALS F D
Sbjct: 3310 HTVLSGNRV-----PHVFALSLFDD 3329
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 43 DW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
DW + YF + + + + + + ++ N + L I LL D
Sbjct: 2051 DWVAGNMYFTNVYPHENYVEVSWLDGSNRKVLVKTTNDAPRELAVDPIKRLLYWID---- 2106
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ R+ KA + G +PLVT I P L ID +YW DS L+T++ + G+
Sbjct: 2107 --YGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYSGA 2164
Query: 160 HNAVL 164
+ V+
Sbjct: 2165 NRKVI 2169
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 646 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 705
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 706 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGTGLLVFKNVTLGWPNGLS 755
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 756 IDFKEDRVYWCDALLDHVQHANLDGT 781
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
R+E+ GM G R ++ I WP+ L +D +Y+ DS L+ ++ +G+
Sbjct: 1475 RVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADSKLDFIDFCYYNGTGRQQVLA 1534
Query: 160 HNAVLCHPNEL 170
+ L HP+ L
Sbjct: 1535 SSHYLLHPHSL 1545
>gi|157124457|ref|XP_001660469.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108873980|gb|EAT38205.1| AAEL009869-PA [Aedes aegypti]
Length = 4525
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 158/326 (48%), Gaps = 26/326 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ E++K
Sbjct: 1034 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDKQDEKDCPPITCLANQFKCNDLRQCVEETYK 1093
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P +QC +C S CIP W CD DC D+
Sbjct: 1094 CDGIPDC-NDGSDELGCPTMEPNQCNLEKHFRCKSSGVCIPVAWHCDGSNDCE-----DH 1147
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ C N +C SK C+ +++CD + DC D +DE + +
Sbjct: 1148 SDEEDCGKITCPNNFYKCKNSK-CVYKSYICDGKDDCG-----DGSDESTEHACITPPLK 1201
Query: 340 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPR 396
C + C G + +CV L+ CD DC NG DEG C+ A C + CS+ C TP
Sbjct: 1202 CPHGQWACPGITERCVNLTSVCDDVEDCPNGADEGLGCD-LAQCTHQTGLCSNGCQKTPL 1260
Query: 397 GAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
GA+C CP G+ P+ C D +EC G C Q CTNT SY CSCT+GY L P+ +C
Sbjct: 1261 GALCICPPGEELAPDNFTCKDLNECDPPGLCSQICTNTKGSYFCSCTDGYILEPNKHTCK 1320
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLN 480
AVN A +I S+ I LN
Sbjct: 1321 AVN---HSSAFLIISNRHSILVADLN 1343
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 142/297 (47%), Gaps = 41/297 (13%)
Query: 204 ECTPGQFSCGM--------GK----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ 251
+C P CGM G+ C+P+ KCDG++DC G DE C Q +
Sbjct: 21 KCQPDDIHCGMPSQSLSVNGRVADICVPKEKKCDGYLDC-RTGVDEEGCPGIACQLDQFR 79
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
CA +CI C+ + DC DN+DE F C GQ +CA S CIP + CD
Sbjct: 80 CANGLRCIDTALKCNHKNDCG-----DNSDEQNCNFPPCHGGQFRCANSL-CIPATFHCD 133
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDC 366
DCS D +DE + A+ C N+ C G N +C+A +K CDGK DC
Sbjct: 134 GYHDCS-----DESDE-----ANCTAIACPDNKFLCPRGGPNGQPKCIAKTKLCDGKRDC 183
Query: 367 SNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGS 424
+G DE C+ A C L C +KC P+ G +C+C G+ + + C D DEC G
Sbjct: 184 EDGTDEETACST-ASCPALGCEYKCGPSLTGGVCYCQPGRTLSSDNRTCSDLDECNEWGH 242
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
CDQ CTNT SY C+C GYTL D C A P +IF+ I R+ +G
Sbjct: 243 CDQLCTNTDGSYFCACASGYTLM-DKSRCVA---PTASNLELIFAYDRAIVRMSSHG 295
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 149/362 (41%), Gaps = 70/362 (19%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
++N+C+ CD DC +G DE G + EC+ +F CG GKCI W+CD
Sbjct: 3639 NNNRCIPKQWMCDFADDCGDGSDESDAQCKGKY--RECSESEFRCGNGKCISSRWRCDHE 3696
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----- 282
DC D SDE N QC NG QC S CI + CD + DC D +DE
Sbjct: 3697 DDC-GDNSDEFNCEGFQCKNGTFQCT-SGHCIASYFRCDGDRDCR-----DMSDEIGCPP 3749
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---------------------- 320
+ C + QCA + C+ + LCD DC +
Sbjct: 3750 RFPGGRYCPESRFQCA-NNLCVSPSDLCDGTDDCGDNSDEATSVCTNFNCDTLRRFQCAN 3808
Query: 321 --------IVDNTDEDWDKYFSHNAVLCHPNELRCG-------SSNQCVALSKFCDGKPD 365
I D D D +N LC + C ++ +C+ ++ CD D
Sbjct: 3809 HRCVARYQICDGVDNCGDGSDENNMTLCATRQKPCDLYTQYQCANKKCIDRAQICDYADD 3868
Query: 366 CSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QNPNKTQCVDADE 418
C + DE C++ + C L C H C + T G +C C G NK C+D DE
Sbjct: 3869 CGDSSDE-LGCHHTSTCSALTKGGCEHHCHNLTDGGYICACYPGFIIDAENKKHCLDIDE 3927
Query: 419 CLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C C CTN + +Y CSC +G+ L + + V + +++FSS +IR
Sbjct: 3928 CATGTHKCSHICTNLNGTYACSCRDGFRL---ADAVSGVCKALKDDVTVVFSSGPEIRAY 3984
Query: 478 HL 479
L
Sbjct: 3985 DL 3986
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/239 (35%), Positives = 115/239 (48%), Gaps = 29/239 (12%)
Query: 165 CHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
C + RCG +++ C+ CDG+PDC + DE C A C G F CG G C P +
Sbjct: 3424 CTTGQHRCGGADEKCIPWFWKCDGEPDCKDKSDEPETCPARHCRAGTFQCGNGNCTPSTT 3483
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DG+DE N C C +C S +CI +W CD + DC D +DE
Sbjct: 3484 ICDGTDDC-GDGTDEQN-CDLPCPVSDFKCRSSGRCILDSWKCDGDADCK-----DGSDE 3536
Query: 283 DWDKFHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
D + H+ + + C + +CIP W+CD + DC D++DE N
Sbjct: 3537 DPEICHKRACDPDTEFSCK-NGRCIPKLWMCDFDNDCG-----DDSDEPAYMCRQRN--- 3587
Query: 340 CHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
C RC G SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 3588 CTTGWSRCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNTETDFKCNNNRCIPK 3646
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 139/342 (40%), Gaps = 77/342 (22%)
Query: 171 RC-GSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKCDGF 227
RC G SN +C+ FCDGK DC + DE P +C T F C +CIP+ W CD F
Sbjct: 3594 RCPGQSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNTETDFKCNNNRCIPKQWMCD-F 3652
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTD 281
D DGSDE + QC +C+ S+ KCI W CD E DC DN+D
Sbjct: 3653 ADDCGDGSDESDA---QCKGKYRECSESEFRCGNGKCISSRWRCDHEDDCG-----DNSD 3704
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + QC NG QC S CI + CD + DC D +DE C
Sbjct: 3705 EFNCEGFQCKNGTFQCT-SGHCIASYFRCDGDRDCR-----DMSDEIGCPPRFPGGRYCP 3758
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK----CSHKCSP---- 393
+ +C ++N CV+ S CDG DC + DE +C+ L+ +H+C
Sbjct: 3759 ESRFQC-ANNLCVSPSDLCDGTDDCGDNSDEATSVCTNFNCDTLRRFQCANHRCVARYQI 3817
Query: 394 ----------TPRGAMCFCPAGQNP---------NKTQCVD-------ADEC-------- 419
+ M C Q P +C+D AD+C
Sbjct: 3818 CDGVDNCGDGSDENNMTLCATRQKPCDLYTQYQCANKKCIDRAQICDYADDCGDSSDELG 3877
Query: 420 ---------LIDGSCDQTCTN-THLSYVCSCTEGYTLRPDGK 451
L G C+ C N T Y+C+C G+ + + K
Sbjct: 3878 CHHTSTCSALTKGGCEHHCHNLTDGGYICACYPGFIIDAENK 3919
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 97/204 (47%), Gaps = 31/204 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S CDG DC + DE C C +F C G+CIP +++CD DC D S
Sbjct: 926 RCIPKSWICDGDDDCLDNSDEEQNCTKPTCGANEFQCKSGRCIPLNFRCDHENDC-GDHS 984
Query: 236 DEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFH 288
DE +C G V CA S+ +CIP+ W CD E DC D +DE D+
Sbjct: 985 DE-----FEC--GNVTCAASQFACENGRCIPNIWKCDSENDCG-----DGSDEGDFCAEK 1032
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C Q C + CIP +W+CD + DC D DE + C N+ +C
Sbjct: 1033 TCAYFQFTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK-----DCPPITCLANQFKCN 1082
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
QCV + CDG PDC++G DE
Sbjct: 1083 DLRQCVEETYKCDGIPDCNDGSDE 1106
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 146/356 (41%), Gaps = 77/356 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P A+ C F C +CIP +W
Sbjct: 2711 CPANHLKCDKTNICVEPYWLCDGDNDCGDNSDEDPLHCAQRTCPQNSFRCPNHRCIPATW 2770
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P C + CF C + CIP ++CD + DC +DN
Sbjct: 2771 YCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2824
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2825 SDED--NRHQCNDRKCDEETEFTCNENKNWARAQCIPKKWICDGDPDC-----VDGADEN 2877
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C ++ C ++ +C+ CD DC +G DEG CN++
Sbjct: 2878 TTLHNCPTPQPCSDDQFTC-TNGRCINQGWVCDHDNDCGDGSDEGKNCNSQYKTCSTQEF 2936
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVDA--------- 416
C+N KC ++C + CP G+ QC+D+
Sbjct: 2937 TCQNFKCIRNQYRCDGEDDCGDHSDEVDCKKENNTCPQGKFTCTNGQCIDSHLVCNKVPD 2996
Query: 417 -------------DEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC + C C +T Y C C GY L DGK+C ++
Sbjct: 2997 CSDESDEPLHCNVDECAKVEIHRCGHKCVDTPTGYYCDCNSGYKLLEDGKACADID 3052
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 148/324 (45%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ + G++R LV+ I +P ++ + N +YW D L N +
Sbjct: 2460 VREKIERSRLDGKDREVLVSATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMI 2516
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGEDE 197
E V R++ S + + + + +N C+ + C +GK +C + +E
Sbjct: 2517 EMVKRLEDSPRDIHVYSHSRQQCQANPCLQNNGGCAQSCHPGLNGKAECKCDDSTKPVNE 2576
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ ++ N C H C + +C
Sbjct: 2577 GRMCAPKNHTCDSSKFYCQNGKCISRMWSCDGDDDCGDNSDEDTNYCAFHSCGPNEFRCN 2636
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE+ + C +G+ C L+ +CIP + +C+
Sbjct: 2637 -NGRCIFKSWKCDHENDCK-----DGSDEENCSYPPCVDGEFTC-LNGRCIPQSQVCNGV 2689
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E K C N L+C +N CV CDG DC + DE
Sbjct: 2690 NDCKDNATSDETHERCPK-----NTTCPANHLKCDKTNICVEPYWLCDGDNDCGDNSDED 2744
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2745 PLHCAQRTCPQNSFRCPNHRCIPA 2768
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 27/219 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPE 220
A C +CG+ N C + CDG DC +G DE C+ C F C G+CI +
Sbjct: 3463 ARHCRAGTFQCGNGN-CTPSTTICDGTDDCGDGTDEQN-CDLPCPVSDFKCRSSGRCILD 3520
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC +DGSDE P C + + + + + +CIP W+CD + DC D
Sbjct: 3521 SWKCDGDADC-KDGSDEDPEICHKRACDPDTEFSCKNGRCIPKLWMCDFDNDCG-----D 3574
Query: 279 NTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++DE Q C G +C + +CIP CD + DC DN+DE
Sbjct: 3575 DSDEPAYMCRQRNCTTGWSRCPGQSNYRCIPKWLFCDGKDDCR-----DNSDE-----LP 3624
Query: 335 HNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C+ + +C ++N+C+ CD DC +G DE
Sbjct: 3625 ENCPKCNTETDFKC-NNNRCIPKQWMCDFADDCGDGSDE 3662
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 112/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP+S C
Sbjct: 2628 CGPNEFRC-NNGRCIFKSWKCDHENDCKDGSDEENCSYPPCVDGEFTCLNGRCIPQSQVC 2686
Query: 225 DGFVDCLEDG-SDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2687 NGVNDCKDNATSDETHERCPKNTTCPANHLKCDKTNICVEPYWLCDGDNDCG-----DNS 2741
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2742 DEDPLHCAQRTCPQNSFRCPNHRCIPATWYCDGDDDCGDGADEPPEYCKSEGRTCFGDLF 2801
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-----SS 350
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2802 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCNENKNWAR 2854
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2855 AQCIPKKWICDGDPDCVDGADENTTLHN 2882
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ V +G + C ++ RC + +C+ + C+ K DC + DE
Sbjct: 53 CDGYLDCRTGVDEEGCP-GIACQLDQFRCANGLRCIDTALKCNHKNDCGDNSDEQNCNFP 111
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-----KC 258
C GQF C CIP ++ CDG+ DC D SDE N C + + C KC
Sbjct: 112 PCHGGQFRCANSLCIPATFHCDGYHDC-SDESDEANCTAIACPDNKFLCPRGGPNGQPKC 170
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I LCD + DC D TDE+
Sbjct: 171 IAKTKLCDGKRDCE-----DGTDEE 190
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C GQ +C + +KCIP W CD E DC D +DE C G QC
Sbjct: 3419 TCIANCTTGQHRCGGADEKCIPWFWKCDGEPDCK-----DKSDEPETCPARHCRAGTFQC 3473
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD TDD D TDE + + C ++ +C SS +C+ S
Sbjct: 3474 G-NGNCTPSTTICD-----GTDDCGDGTDE------QNCDLPCPVSDFKCRSSGRCILDS 3521
Query: 358 KFCDGKPDCSNGEDEGP-FCNNKA-------DCENLKCSHK 390
CDG DC +G DE P C+ +A C+N +C K
Sbjct: 3522 WKCDGDADCKDGSDEDPEICHKRACDPDTEFSCKNGRCIPK 3562
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGS------ 159
++E + M G R PL+T+ I+ P+ L IDY QD ++YW D+ LNT+E ++ DGS
Sbjct: 4123 KIEVSWMDGSKRRPLITEAIRHPAGLTIDYAQDHMVYWVDTKLNTIEVMKPDGSMRRSIL 4182
Query: 160 HNAVLCHPNEL 170
+L HP L
Sbjct: 4183 KGEMLKHPVSL 4193
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T ++I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3238 LQAYIAKMGMDGSNFTRILTWEQDIAWPNALTIDYFTDRIYWADAHLDYIAFSDLEGRHR 3297
Query: 162 AVL 164
V+
Sbjct: 3298 HVV 3300
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 58/146 (39%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTL--ALEFNHRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + HR L ++
Sbjct: 650 VHRNGTGREIVLASQNEGVEGLAVDWVSKNLYYIDSRKGTLNVLSTRTVTHRRTLLKNLK 709
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 710 RPRAIVVHPNKGYI--YFSEWDRPA--------NISRANSDGTGLMVFKNVTLGWPNGLS 759
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 760 IDFKEDRVYWCDALLDHVQHSNLDGT 785
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Query: 43 DW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
DW + YF + + + + + ++ N + L I LL D
Sbjct: 2042 DWVAGNMYFTNVFPHENYVEVSWLDGTHRKIIVKTTNDAPRELAVNPIKRLLYWIDYGQ- 2100
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+P R+ K + G N +P+VT I P L +D +YW DS L+ ++ + +G
Sbjct: 2101 --YP---RIGKCYLDGSNWTPVVTSGISNPRDLTVDMLTHDVYWVDSKLDMIQKISYNGG 2155
Query: 160 HNAVL 164
+ V+
Sbjct: 2156 NRQVI 2160
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
R+E+ GM G R ++ I WP+ L +D + +Y+ DS L+ ++ +G+
Sbjct: 1466 RIERIGMDGTMRETIINTKIYWPNGLTLDISTQRVYFADSKLDFIDFCYYNGT 1518
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N + + N + + + +Q + V + + + + ++ IF
Sbjct: 1315 NKHTCKAVNHSSAFLIISNRHSILVADLNEQGLERVPIIVENV--VATASNMHTGTIFWS 1372
Query: 105 DERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K + P +++ + L D+ LYW DS LNT+E +GS+
Sbjct: 1373 DMKLKKISRLDRGQEPREIISTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVCSENGSNRL 1432
Query: 163 VLCHPN 168
VL N
Sbjct: 1433 VLVREN 1438
>gi|74181737|dbj|BAE32580.1| unnamed protein product [Mus musculus]
Length = 1457
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 111/318 (34%), Positives = 154/318 (48%), Gaps = 34/318 (10%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC + +
Sbjct: 120 RCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSDE 178
Query: 237 EPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKF 287
C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 179 THANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGVT 233
Query: 288 HQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 234 HVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPPSHP 283
Query: 347 CG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPA 404
C +++ C+ K CDGK DC +G DEG C ++ N CSH CS P G +C CP
Sbjct: 284 CANNTSVCLPPDKLCDGKDDCGDGSDEGELC-DQCSLNNGGCSHNCSVAPGEGIVCSCPL 342
Query: 405 GQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G + C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 343 GMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK-- 400
Query: 463 PASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 401 -PFIIFSNRHEIRRIDLH 417
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 27 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 85
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 86 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 139
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 140 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 195
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C C+ L CDG DC + DE CE + +H C P
Sbjct: 196 SDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 238
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 78/176 (44%), Gaps = 27/176 (15%)
Query: 220 ESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC +
Sbjct: 1 ERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDES 59
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N C Q CA S +CIP +W CD + DC D +DE +
Sbjct: 60 NATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP---- 106
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C P ++ +C+ ++ CD DC + DE CSH CS T
Sbjct: 107 TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GCSHSCSST 150
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ G + V+
Sbjct: 1164 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGENREVVL 1223
Query: 166 HPNEL 170
N +
Sbjct: 1224 SSNNM 1228
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 538 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 590
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 591 YSARYDGSGHMEVLRGHEF 609
>gi|291231248|ref|XP_002735580.1| PREDICTED: low density lipoprotein-related protein 2-like
[Saccoglossus kowalevskii]
Length = 2965
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 158/325 (48%), Gaps = 20/325 (6%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C +C S+ QC++ CD + DC G+DE C F+C G CI + W
Sbjct: 2011 VTCPGGHYQC-STGQCISSYWVCDDEEDCPEGDDELDCMAGTCNEKMFTCLNGMCIFKEW 2069
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CD DC ++ +E + +C + + C + +C+P +W CD E+DC D++DE
Sbjct: 2070 RCDYDDDCGDNSDEEKCVYVSECNDNEFNCT-NGECLPSHWHCDGEVDCQ-----DSSDE 2123
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVL- 339
+ C +V CA + CIP W CD DC S+D+ V+ T D + V+
Sbjct: 2124 LHCELKLCAEDEVMCADTLACIPKQWHCDGVPDCHDSSDEKVNCTTADVATSLPNFLVVE 2183
Query: 340 -CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C ++ +C N C+A + C+G +C + DEG C++ N CSH C PTPRG
Sbjct: 2184 DCTADQYQCAIGN-CIARNLLCNGIDECDDSSDEGHQCDSSC-VFNGGCSHLCIPTPRGP 2241
Query: 399 MCFCPAG--QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+C CP G N C D +ECL+ C C N SY CSC GY L D + C A
Sbjct: 2242 LCGCPNGLELGENDKSCDDVNECLVYPPVCSHNCDNIKGSYTCSCEAGYRLHADERGCKA 2301
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLN 480
Q + A +IF+ ++R L
Sbjct: 2302 ----QGDEARLIFAIEKELRMQTLG 2322
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 149/337 (44%), Gaps = 86/337 (25%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL-- 164
++EK M G R LVT ++ WP+ L +D +D LYW D+H NT+E+VR+DG V+
Sbjct: 1802 KIEKTTMDGAIREKLVTTHLIWPNGLCLDLTEDRLYWTDAHTNTIETVRLDGGDRKVIVT 1861
Query: 165 --------------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
C P++ RC + C+++ CD + DC +G DE
Sbjct: 1862 NIPHPFSVAILENKVYWVDLESTLSTCAPDKFRC-ENGHCLSIYWLCDEEFDCEDGSDET 1920
Query: 199 P-FCNAE----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQV 250
P CN C F C CI ES CDGF DC DGSDE + C+++ C N +
Sbjct: 1921 PEACNRRREHNCIGKDFICENQICIRESLVCDGFQDC-GDGSDEID-CVYERTSCSNEEF 1978
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWL 309
C C+ + +CD DC +D TDE + D C G QC+ + +CI W+
Sbjct: 1979 LCD-EYHCLSLDKICDRIEDC-----LDGTDEQECDVIVTCPGGHYQCS-TGQCISSYWV 2031
Query: 310 CDEEMDCST----------------------------------DDIVDNTDEDWDKYFSH 335
CD+E DC DD DN+DE+ Y S
Sbjct: 2032 CDDEEDCPEGDDELDCMAGTCNEKMFTCLNGMCIFKEWRCDYDDDCGDNSDEEKCVYVSE 2091
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ NE C ++ +C+ CDG+ DC + DE
Sbjct: 2092 ----CNDNEFNC-TNGECLPSHWHCDGEVDCQDSSDE 2123
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/332 (32%), Positives = 147/332 (44%), Gaps = 45/332 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E+ C + +CV CDG+ DC + DE C+ C +F C G+CI +W+C
Sbjct: 1052 CGNFEMEC-PNGKCVLNVWVCDGEDDCGDNADEAE-CDTTCRHNEFQCANGRCISINWRC 1109
Query: 225 DGF---------VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
D VDC +P TC + Q C + +CIP W+CD E DCS +
Sbjct: 1110 DNDNDCNDNSDEVDC--GMLKKPVTCGIE----QFLCNSTMECIPEVWVCDYEADCSQGE 1163
Query: 276 IVDNTDEDWDKFHQCFNG---QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D+ C + + +++CIP +WLCD +DCS N ++ D
Sbjct: 1164 ---------DEPESCLPAGCREDEFNCTERCIPESWLCDRIIDCS------NGIDELDCI 1208
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
S V + + QC+ L C+ DC + DEG C CE CS C
Sbjct: 1209 HSKTHVKSEGCDSFECDNGQCINLELICNDVADCDDESDEGHLCAINL-CERKGCSELCH 1267
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRP 448
TP G MC C G Q+ N T C D +EC G C Q CTN Y CSC +GY L P
Sbjct: 1268 MTPNGPMCHCQVGHRLQSDNMT-CEDINECSESIGLCSQQCTNLKGYYKCSCMDGYKLEP 1326
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D +C D +IF++ +IR L+
Sbjct: 1327 DEHTCKV----SDGDPLLIFTTDHEIRGYFLH 1354
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 149/366 (40%), Gaps = 68/366 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G A C P + +C S C+ +S CDG+ DC + +DE +C +F C G+C
Sbjct: 3 GPRLAQSCSPGQFQC--STLCIPVSWVCDGEADCQDAQDEKDCEMKDCQDDEFRCTNGRC 60
Query: 218 IPESWKCDGFVDC--------------------LEDGSDEPNTCI--------------- 242
I CD DC L DG P + +
Sbjct: 61 ISHDLHCDQTDDCGDATDEQECVSTCSSEDFTCLSDGRCLPISWVCDGDDDCADGLDELH 120
Query: 243 -----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ C QC S CIP W+CD E DC + TDE+ + C + QC
Sbjct: 121 CEHLDNNCEPSMFQCKYS--CIPLRWICDGEADCH-----EGTDEE-NCSDICNDDNYQC 172
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S +CIP W CD DC D +DE+ + C + C + N CV +
Sbjct: 173 G-SGECIPKYWQCDGTSDCD-----DASDENCTI---ADTSQCLQTQFECSNGN-CVLME 222
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVD 415
C+G DC + DE +N+ D +N CSH C P C CP G + C D
Sbjct: 223 YVCNGHDDCGDQSDEN-CGHNECDDDNGGCSHICVTIPTSYRCECPLGFSLGLDNHTCQD 281
Query: 416 ADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
+EC+ G C C NT SY CSC +GY L DG SC A + +IF+ ++
Sbjct: 282 TNECIDSFGICSHECANTLGSYQCSCKQGYLLEVDGVSCKATG----SESKLIFTDKSEV 337
Query: 475 RRIHLN 480
R L+
Sbjct: 338 RIFSLH 343
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 118/265 (44%), Gaps = 57/265 (21%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+E +C +++QC+ ++ CDG DC +G DE C C F C GKCIP +W CD
Sbjct: 941 DEFQC-ANDQCLPIAWRCDGMQDCRDGSDEQD-CGNRCAANTFLCNNGKCIPSNWVCDQD 998
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC D SDE C C +C ++ CIP +W CD + DC D++DED D
Sbjct: 999 NDC-GDYSDELQ-CNLNCTTDDFKCR-NEYCIPSSWRCDGDEDCR-----DHSDED-DCE 1049
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHN---------- 336
+ C N +++C + KC+ + W+CD E DC DN DE + D HN
Sbjct: 1050 NPCGNFEMECP-NGKCVLNVWVCDGEDDCG-----DNADEAECDTTCRHNEFQCANGRCI 1103
Query: 337 --------------------------AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
V C + C S+ +C+ CD + DCS GE
Sbjct: 1104 SINWRCDNDNDCNDNSDEVDCGMLKKPVTCGIEQFLCNSTMECIPEVWVCDYEADCSQGE 1163
Query: 371 DEGPFCNNKADC--ENLKCSHKCSP 393
DE C A C + C+ +C P
Sbjct: 1164 DEPESC-LPAGCREDEFNCTERCIP 1187
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EKAGM G +R +V++N+ WP+ L IDY L+W D L +ES + G V+
Sbjct: 466 KIEKAGMDGSDREVIVSQNLMWPNGLTIDYATGRLFWTDGKLKLLESCDLAGKDRQVV 523
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPES 221
V C + C S+ +C+ CD + DCS GEDE C A C +F+C +CIPES
Sbjct: 1131 VTCGIEQFLCNSTMECIPEVWVCDYEADCSQGEDEPESCLPAGCREDEFNC-TERCIPES 1189
Query: 222 WKCDGFVDCLEDGSDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEE 268
W CD +DC +G DE + CIH +C NGQ CI +C++
Sbjct: 1190 WLCDRIIDC-SNGIDELD-CIHSKTHVKSEGCDSFECDNGQ--------CINLELICNDV 1239
Query: 269 MDC 271
DC
Sbjct: 1240 ADC 1242
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++ ++EKA M G NR ++ + +P+ + IDY LYW D+ LN +E DG+
Sbjct: 2388 IEPKIEKAWMDGSNREVIIKTKLLYPNGITIDYVHQRLYWVDAGLNVIEYANFDGTERRS 2447
Query: 164 L 164
L
Sbjct: 2448 L 2448
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 49 KRILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEI---- 101
K IL+ HT LA+++ +R +++ L + +++ D P I
Sbjct: 1390 KSILSNLHTPVSLAIDWINRMLYWTDSGYSHIAVCTLEGQMVTLVISDIDQPQSIIVDSS 1449
Query: 102 --------FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
+ ++EK+GM G R+ LV +I P+ L +D ++LY+ D+ L+ +
Sbjct: 1450 TGYLYWSSWGETAKIEKSGMDGTRRNILVDTSITTPNRLTLDRTSNMLYFVDTTLDAIMK 1509
Query: 154 VRVDGSHNAVL 164
+ +G + V+
Sbjct: 1510 IDTEGQNFMVI 1520
>gi|348585677|ref|XP_003478597.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2-like [Cavia porcellus]
Length = 4662
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/342 (32%), Positives = 160/342 (46%), Gaps = 63/342 (18%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C++ CD + DC +G DE C+ Q +C G+C+P +++CD DC +DG+D
Sbjct: 89 ECISRLWVCDNEEDCDDGSDEHNCPGRTCSSDQLTCSSGQCVPRAYRCDHVQDC-QDGTD 147
Query: 237 EPN------------------------------------TCIHQCFNGQVQCALSKKCIP 260
E + C C + + QC + +C+P
Sbjct: 148 ERDCHYPVCEQLTCANGACYNTSQKCDSKMDCRDSSDEVNCTETCMHDEFQCG-TGECVP 206
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+LCD + DC+ D +DE K+ C Q C +CI NW+CD + DC
Sbjct: 207 RGYLCDHDQDCN-----DGSDEHNCKYETCSGNQFTCP-GGQCIHQNWVCDGQDDCP--- 257
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--- 377
D DED H++ C+P E C +S QC+++ + CDG PDC G DE N
Sbjct: 258 --DFGDEDGCATKRHHS--CYPREXPCPNSGQCISIYQVCDGVPDCPRGADENSTSNESH 313
Query: 378 -NKADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNT 432
+ C L C +C TP G CFCP G QN ++T CV D+C I G CDQ C N
Sbjct: 314 CGTSLCSVLNCEFQCHKTPYGGSCFCPPGYVINQNDSRT-CVAFDDCQIWGICDQKCENR 372
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
+ C C EGY L + + C A N +E AS+IFS+ D+
Sbjct: 373 MGHHRCGCEEGYVLERE-RHCRA-NTSFNE-ASVIFSNGRDL 411
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/300 (35%), Positives = 140/300 (46%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C PN+ C ++C+ + CDG DC++G DE C CT QF C G +CI ++
Sbjct: 1157 CRPNQFHC-PDHRCIDPTYVCDGDKDCADGSDEAG-CIYNCTTYQFKCADGSRCINNRYR 1214
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1215 CDGVYDC-SDNSDEAGCPTRPPGMCHTDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1268
Query: 281 DEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE + C + Q C + CI W+CD + DC D+ D D +
Sbjct: 1269 DEHHGCVPKTCLSSQFHCD-NGNCIYKEWVCDGDNDCR--DMSDEKDCPTQPFH------ 1319
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C + +C CV LS CDG DC NG DE P CN + N C+H+C P G
Sbjct: 1320 CPSWQWQCPGYAICVNLSAVCDGVFDCPNGTDESPLCNEDSCSHFNGGCTHQCIQGPFGV 1379
Query: 399 MCFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP+G Q N T+ C D +EC G C Q C N S+ C+C Y L DG++C A
Sbjct: 1380 TCLCPSGYQLANDTKTCEDINECDTPGFCSQLCYNLRGSFRCTCDSDYNLEDDGRTCKAT 1439
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 158/366 (43%), Gaps = 61/366 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIPES 221
C +E +C S +C+ S +CD + DCS+G DE C C +F C G+CIP
Sbjct: 2872 CSSSEFQCVSPQRCIPRSWYCDEEADCSDGSDEPSTCTHAERTCLSNEFKCDGGRCIPRD 2931
Query: 222 WKCDGFVDCLE-DGSDEPNTC-IHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS--- 272
W CDG DC + DE + C H C + + CA S ++CIP +W+CD + DC+
Sbjct: 2932 WICDGDNDCGDMSDEDERHHCEQHTCSSSEFHCANSVPPGRQCIPRSWVCDGDADCADAF 2991
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C Q C +
Sbjct: 2992 DEHQNCTRRSCSAGEFTCNNGLCILQSYRCDRRNDCGDYSDERDCSYPTCREYQFTCQ-N 3050
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCGSSNQCVALSKF 359
+CI ++CD + DC D +DE ++ H C P++ +C + C+ + K
Sbjct: 3051 GRCINKLFVCDHDNDCG-----DESDEQ--EHLCHALQPTCPPHQFKC-DNGHCIEMVKV 3102
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C H C+ T C C G +K CVD
Sbjct: 3103 CNHLDDCSDNSDEKGCGINECLDHSISGCDHNCTDTVTSFYCSCRPGYKLMSDKKTCVDI 3162
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGK+C D +IFS+ +R
Sbjct: 3163 DECKETPYVCSQKCENEIGSYICKCAPGYIREPDGKTCRQ---NSDIEPYLIFSNRYYLR 3219
Query: 476 RIHLNG 481
+ ++G
Sbjct: 3220 NLTVDG 3225
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 160/355 (45%), Gaps = 71/355 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C +C ++N C++ CDG DC + DE P +C+ C+ +F C +CIP S
Sbjct: 2830 CPSGYTKCPNTNICISRLYLCDGDNDCGDMSDENPTYCSTHTCSSSEFQCVSPQRCIPRS 2889
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CD DC DGSDEP+TC H C + + +C +CIP +W+CD + DC D+ D
Sbjct: 2890 WYCDEEADC-SDGSDEPSTCTHAERTCLSNEFKCD-GGRCIPRDWICDGDNDCG--DMSD 2945
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
+ + H C + + CA S ++CIP +W+CD + DC+ + +D++ +
Sbjct: 2946 EDERHHCEQHTCSSSEFHCANSVPPGRQCIPRSWVCDGDADCA---------DAFDEHQN 2996
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNN-KADCENLKCSH 389
C E C ++ C+ S CD + DC + DE P C + C+N +C +
Sbjct: 2997 CTRRSCSAGEFTC-NNGLCILQSYRCDRRNDCGDYSDERDCSYPTCREYQFTCQNGRCIN 3055
Query: 390 K---------CSPTPRGAMCFCPAGQN---PNKTQCVDA--------------------- 416
K C C A Q P++ +C +
Sbjct: 3056 KLFVCDHDNDCGDESDEQEHLCHALQPTCPPHQFKCDNGHCIEMVKVCNHLDDCSDNSDE 3115
Query: 417 -----DECL---IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+ECL I G CD CT+T S+ CSC GY L D K+C ++ ++ P
Sbjct: 3116 KGCGINECLDHSISG-CDHNCTDTVTSFYCSCRPGYKLMSDKKTCVDIDECKETP 3169
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/330 (31%), Positives = 143/330 (43%), Gaps = 32/330 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC ++ QC+ CD + DC + DE C P F C G CIP ++C
Sbjct: 3768 CTESEFRC-TNQQCIPSRWVCDQENDCGDNSDERDCELRTCHPEHFQCTSGHCIPSGFQC 3826
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
DG DCL D SDE +TC + NG A +C H ++CD E DC D
Sbjct: 3827 DGRADCL-DASDE-STCPTRFPNGTYCPAALFECKNHVCVQSYFVCDGEDDCG-----DG 3879
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H CF+ + +C L + + DD D TDE +
Sbjct: 3880 SDE---ALHLCFSVACEPPQRFRCDNSRCLYAQRVCNGVDDCGDGTDEKEEHCRKPTPKP 3936
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD---CENLKCSHKCSPTPR 396
C NE +C + N C++ CD DC + DE CN D ENL C H C+
Sbjct: 3937 CTENEFKCSNGN-CISQLNICDDVDDCGDLSDETG-CNIGKDRTCAENL-CEHNCTQLSE 3993
Query: 397 GA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--G 450
G +C C +G ++ C D +EC G C Q C NT SY C C +G+ G
Sbjct: 3994 GGFICSCRSGYKAGTSDRNSCQDINECEGFGVCPQNCRNTKGSYECFCADGFRSLSTHYG 4053
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ C A P ++ V IR+ +++
Sbjct: 4054 ERCAA----DGNPPLLLLPENVRIRKYNVS 4079
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 27/254 (10%)
Query: 151 VESVRVDGSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPG 208
+++R+ G + +C + C ++ +C+ + CDG+ DCS+G DE C + C G
Sbjct: 3506 FQTLRLSGRTLCLPMCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDEPALCPHRFCQLG 3565
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCD 266
QF C G C C+G +C DGSDE + H+C Q QCA +K+CIP +W CD
Sbjct: 3566 QFQCRDGNCTSPQSLCNGQQNC-HDGSDEDHALCENHRCEPYQWQCA-NKQCIPDSWQCD 3623
Query: 267 EEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC +DN+DED C GQ +C + +CIP W CD + DC D
Sbjct: 3624 SVNDC-----LDNSDEDRAHCASRTCRPGQFRCN-NGRCIPQTWKCDVDNDCG-----DY 3672
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----EGPFCNNKA 380
+DE + S + + C ++ +CV L C+G DC + D E C+
Sbjct: 3673 SDEPIHECMSAAHRCDNHTDFSCKTNYRCVPLWTVCNGVDDCRDNSDEQGCEARTCHPSG 3732
Query: 381 DCENLKC-SHKCSP 393
D +C +HKC P
Sbjct: 3733 D---FRCKNHKCIP 3743
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 110/258 (42%), Gaps = 72/258 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C P + +C ++ QC+ S CD DC ++ ED + C PGQF C G+CIP++W
Sbjct: 3603 CEPYQWQC-ANKQCIPDSWQCDSVNDCLDNSDEDRAHCASRTCRPGQFRCNNGRCIPQTW 3661
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQC------------------------------ 252
KCD DC D SDEP IH+C + +C
Sbjct: 3662 KCDVDNDC-GDYSDEP---IHECMSAAHRCDNHTDFSCKTNYRCVPLWTVCNGVDDCRDN 3717
Query: 253 ------------------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+ KCIP W CD E DC D++DE+ +C +
Sbjct: 3718 SDEQGCEARTCHPSGDFRCKNHKCIPLRWKCDGEDDCG-----DSSDEENCAPRECTESE 3772
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C +++CIP W+CD+E DC DN+DE CHP +C +S C+
Sbjct: 3773 FRCT-NQQCIPSRWVCDQENDCG-----DNSDER-----DCELRTCHPEHFQC-TSGHCI 3820
Query: 355 ALSKFCDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 3821 PSGFQCDGRADCLDASDE 3838
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 101/218 (46%), Gaps = 24/218 (11%)
Query: 174 SSNQCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
S+ +C+ L C+G +C ++ DE C G C CI + CDG DC
Sbjct: 2797 SNGRCIPLEYVCNGVNNCHDNSTSDERNCPERTCPSGYTKCPNTNICISRLYLCDGDNDC 2856
Query: 231 LEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
+ + P C H C + + QC ++CIP +W CDEE DCS D +DE H
Sbjct: 2857 GDMSDENPTYCSTHTCSSSEFQCVSPQRCIPRSWYCDEEADCS-----DGSDEPSTCTHA 2911
Query: 290 ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + + +C +CIP +W+CD + DC D +DED + + C +E
Sbjct: 2912 ERTCLSNEFKCD-GGRCIPRDWICDGDNDCG-----DMSDEDERHHCEQHT--CSSSEFH 2963
Query: 347 CGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +S QC+ S CDG DC++ DE C ++
Sbjct: 2964 CANSVPPGRQCIPRSWVCDGDADCADAFDEHQNCTRRS 3001
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 131/331 (39%), Gaps = 76/331 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N+S +++ + WP+++ IDY D LYW D+HL +E ++G H +
Sbjct: 3355 IARVGMDGANKSVIISTKLSWPNAITIDYTNDFLYWADAHLGYIEYSDLEGHHRHTVYDG 3414
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
VL HP + + SN+ V ++ P
Sbjct: 3415 VLPHPYAITVFEDTIYWTDWNTRTVEKGNKYNGSNRVVLVNTTHRPFDIHVYHPYRQPIV 3474
Query: 202 NAECTPGQFSCG---MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
N C C + K + C+ D C+ C + Q CA ++KC
Sbjct: 3475 NNPCGTNNGGCSHLCLIKAGGNGFTCECPDDFQTLRLSGRTLCLPMCSSTQFLCANNEKC 3534
Query: 259 IPHNWLCDEEMDCS--TDDIV---------------------------------DNTDED 283
IP W CD + DCS +D+ D +DED
Sbjct: 3535 IPIWWKCDGQKDCSDGSDEPALCPHRFCQLGQFQCRDGNCTSPQSLCNGQQNCHDGSDED 3594
Query: 284 WD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ H+C Q QCA +K+CIP +W CD DC +DN+DED S C
Sbjct: 3595 HALCENHRCEPYQWQCA-NKQCIPDSWQCDSVNDC-----LDNSDEDRAHCASRT---CR 3645
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P + RC ++ +C+ + CD DC + DE
Sbjct: 3646 PGQFRC-NNGRCIPQTWKCDVDNDCGDYSDE 3675
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 147/389 (37%), Gaps = 114/389 (29%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGM-GKC 217
P +CGS + +CV CDG DC + DE N C+P F+C G+C
Sbjct: 1028 PPTEQCGSFSFACNNGKCVPSFFRCDGIDDCHDNSDEHQCGTSNNTCSPWAFTCVHGGEC 1087
Query: 218 IPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
IP W+CD DC+ DGSDE P C C + +CIP +WLCD + DC
Sbjct: 1088 IPGHWRCDRHNDCV-DGSDEQNCPTRPPTTCPESSYACD-NNRCIPRDWLCDTDNDCG-- 1143
Query: 275 DIVDNTDE----------------------------DWDK-----------FHQCFNGQV 295
D +DE D DK + C Q
Sbjct: 1144 ---DGSDEKNCNSSSTCRPNQFHCPDHRCIDPTYVCDGDKDCADGSDEAGCIYNCTTYQF 1200
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+CA +CI + + CD DCS DN+DE + +CH +E +C C+
Sbjct: 1201 KCADGSRCINNRYRCDGVYDCS-----DNSDEAGCP--TRPPGMCHTDEFQCQGDGTCIP 1253
Query: 356 LSKFCDGKPDCSNGEDEGPFC------NNKADCENLKCSHK---------CS-------- 392
+ CDG PDC +G DE C +++ C+N C +K C
Sbjct: 1254 NTWECDGHPDCIHGSDEHHGCVPKTCLSSQFHCDNGNCIYKEWVCDGDNDCRDMSDEKDC 1313
Query: 393 PT------------PRGAMCF-----------CPAGQNPNKTQCVDADECL-IDGSCDQT 428
PT P A+C CP G +++ + D C +G C
Sbjct: 1314 PTQPFHCPSWQWQCPGYAICVNLSAVCDGVFDCPNGT--DESPLCNEDSCSHFNGGCTHQ 1371
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C C GY L D K+C +N
Sbjct: 1372 CIQGPFGVTCLCPSGYQLANDTKTCEDIN 1400
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 109/274 (39%), Gaps = 66/274 (24%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ + CD DC +G DE A C P F+C G+C+ S++CD + DC ++
Sbjct: 2719 HCIQEAWICDQDNDCGDGSDELEIVCAFHTCPPTTFTCANGRCVRYSYRCDHYNDCGDNS 2778
Query: 235 -----------------------------------------SDEPNTCIHQCFNGQVQCA 253
SDE N C +G +C
Sbjct: 2779 DEQGCLFRSCNDTTEFTCSNGRCIPLEYVCNGVNNCHDNSTSDERNCPERTCPSGYTKCP 2838
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCD 311
+ CI +LCD + DC D +DE+ + H C + + QC ++CIP +W CD
Sbjct: 2839 NTNICISRLYLCDGDNDCG-----DMSDENPTYCSTHTCSSSEFQCVSPQRCIPRSWYCD 2893
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
EE DCS D +DE +H C NE +C +C+ CDG DC + D
Sbjct: 2894 EEADCS-----DGSDE--PSTCTHAERTCLSNEFKC-DGGRCIPRDWICDGDNDCGDMSD 2945
Query: 372 EGPFCNNKADCENLKCS----HKCSPTPRGAMCF 401
E + + CE CS H + P G C
Sbjct: 2946 E----DERHHCEQHTCSSSEFHCANSVPPGRQCI 2975
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/263 (30%), Positives = 106/263 (40%), Gaps = 49/263 (18%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+G CNA+ QF CG G CIP W+CDG DC++D +DE C QC
Sbjct: 35 QGGGCNAD----QFRCGNGYCIPAHWRCDGTRDCIDD-TDEAGCPPRSCSASLFQCH-DG 88
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+CI W+CD E DC D +DE C + Q+ C+ S +C+P + CD DC
Sbjct: 89 ECISRLWVCDNEEDCD-----DGSDEHNCPGRTCSSDQLTCS-SGQCVPRAYRCDHVQDC 142
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---- 372
D TDE Y + C ++ C S+ CD K DC + DE
Sbjct: 143 Q-----DGTDERDCHYPVCEQLTC--------ANGACYNTSQKCDSKMDCRDSSDEVNCT 189
Query: 373 ------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQNPNKTQC 413
G C++ DC + H C T G CP GQ ++
Sbjct: 190 ETCMHDEFQCGTGECVPRGYLCDHDQDCNDGSDEHNCKYETCSGNQFTCPGGQCIHQNWV 249
Query: 414 VDA-DECLIDGSCDQTCTNTHLS 435
D D+C G D T H S
Sbjct: 250 CDGQDDCPDFGDEDGCATKRHHS 272
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 115/287 (40%), Gaps = 44/287 (15%)
Query: 92 NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
++WD PA ++EKA + G R P+V ++ WPS L +DY+ ++LYW D+ L +
Sbjct: 2532 SNWDTPA--------QIEKATLGGNFRVPIVNTSLVWPSGLTLDYDLNLLYWVDTSLQKI 2583
Query: 152 ESVRVDGSHNAVLCHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
E + V G + V+ G + Q + + F K +N D G
Sbjct: 2584 ERISVTGMNREVIISSAFRSFGLTLYGQYIYWTNFFTKKVYRANKYD-----------GS 2632
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP----HNWLC 265
M +P K D D+ C + C Q+ S C+P +C
Sbjct: 2633 GQIAMTTTLPVRPK-----DICVARKDQNQHCTNPC--DQINGGCSHICVPGPNGAECVC 2685
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
E + DN D +C + Q C L+ CI W+CD++ DC D +
Sbjct: 2686 PHEGQWYLAN--DNKFCVVDTGARCEHSQFTC-LNGHCIQEAWICDQDNDCG-----DGS 2737
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE H C P C ++ +CV S CD DC + DE
Sbjct: 2738 DELEIVCAFHT---CPPTTFTC-ANGRCVRYSYRCDHYNDCGDNSDE 2780
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 110/262 (41%), Gaps = 39/262 (14%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIP 260
A C QF+C G CI E+W CD DC DGSDE H C CA + +C+
Sbjct: 2706 ARCEHSQFTCLNGHCIQEAWICDQDNDC-GDGSDELEIVCAFHTCPPTTFTCA-NGRCVR 2763
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+++ CD DC DN+DE F C + + +CIP ++C+ +C
Sbjct: 2764 YSYRCDHYNDCG-----DNSDEQGCLFRSCNDTTEFTCSNGRCIPLEYVCNGVNNCH--- 2815
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNK 379
DN+ D C +C ++N C++ CDG DC + DE P +C+
Sbjct: 2816 --DNSTSDERNCPERT---CPSGYTKCPNTNICISRLYLCDGDNDCGDMSDENPTYCS-- 2868
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
+H CS + C P P C + +C DGS D+ T TH C
Sbjct: 2869 --------THTCSSSE--FQCVSPQRCIPRSWYCDEEADCS-DGS-DEPSTCTHAERTCL 2916
Query: 440 CTEGYTLRPDGKSCTAVNVPQD 461
E + DG C +P+D
Sbjct: 2917 SNE---FKCDGGRC----IPRD 2931
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 138/404 (34%), Gaps = 96/404 (23%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ W PA ++ +A G + P+V + WP+ L ID+ LYW D+ +
Sbjct: 848 FFSDWFRPA--------KIMRAWADGSHLVPIVNTTLGWPNGLAIDWEASRLYWVDAFFD 899
Query: 150 TVESVRVDG------SHNAVLCHPNEL------------RCGSSNQCVAL---------- 181
+E DG H + HP L R G+ Q L
Sbjct: 900 KIEHSTFDGFDRRRLGHVEQMTHPFGLTVFKDHVYFTDWRLGAIVQVRKLDGGDMRIIRS 959
Query: 182 ------------SKFCDGKPDCSNGEDEGPFCNAECTP---GQFSCGMGKCIPESWKCDG 226
+ G CS C+ C P Q CG C
Sbjct: 960 GITNVMHVKAYDANLQTGTNYCSQPTHPNGDCSHFCFPVPNFQRVCG---CXYGMKLASN 1016
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+ C D + EP T QC + C + KC+P + CD DD DN+DE
Sbjct: 1017 HMTCEGDPAHEPPT--EQCGSFSFACN-NGKCVPSFFRCD-----GIDDCHDNSDE---- 1064
Query: 287 FHQCFNGQ-------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
HQC C +CIP +W CD DC VD +DE +
Sbjct: 1065 -HQCGTSNNTCSPWAFTCVHGGECIPGHWRCDRHNDC-----VDGSDE--QNCPTRPPTT 1116
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C + C +N+C+ CD DC +G DE +N S C P
Sbjct: 1117 CPESSYAC-DNNRCIPRDWLCDTDNDCGDGSDE----------KNCNSSSTCRPN----Q 1161
Query: 400 CFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CP + + T D D+ DGS + C +Y C +G
Sbjct: 1162 FHCPDHRCIDPTYVCDGDKDCADGSDEAGCIYNCTTYQFKCADG 1205
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DGS V
Sbjct: 4216 EPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNNDRIYWSDSKEDVIETIKYDGSDRRV 4275
Query: 164 L 164
+
Sbjct: 4276 I 4276
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +CG+ +CV CD DC++G DE C+ QF+C G+CI ++W C
Sbjct: 192 CMHDEFQCGTG-ECVPRGYLCDHDQDCNDGSDEHNCKYETCSGNQFTCPGGQCIHQNWVC 250
Query: 225 DGFVDCLEDGSDE--PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
DG DC + G ++ H C+ + C S +CI +CD DC
Sbjct: 251 DGQDDCPDFGDEDGCATKRHHSCYPREXPCPNSGQCISIYQVCDGVPDC 299
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 542 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDLMAKRVYWVDSRFDCIETVTYDGIQRKTV 601
Query: 165 CHPNEL 170
H L
Sbjct: 602 LHGGSL 607
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 112/311 (36%), Gaps = 70/311 (22%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + + QC ++CIP +W CDEE DCS D +DE
Sbjct: 2870 HTCSSSEFQCVSPQRCIPRSWYCDEEADCS-----DGSDE-------------------- 2904
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLE-------KA 111
S C ++ S +C + W D ++ DER +
Sbjct: 2905 ----PSTCTHAERTCLSNEFKCDGGRCIPRDWICDGDNDCGDMSDEDERHHCEQHTCSSS 2960
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
H N P + I P S V D + D D H N C E
Sbjct: 2961 EFHCANSVPPGRQCI--PRSWVCDGDADCADAFDEHQNCTRRS----------CSAGEFT 3008
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
C ++ C+ S CD + DC + DE C QF+C G+CI + + CD DC
Sbjct: 3009 C-NNGLCILQSYRCDRRNDCGDYSDERDCSYPTCREYQFTCQNGRCINKLFVCDHDNDC- 3066
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE----EMDC---STDDIVDNTDEDW 284
D SDE H AL C PH + CD EM DD DN+DE
Sbjct: 3067 GDESDEQEHLCH---------ALQPTCPPHQFKCDNGHCIEMVKVCNHLDDCSDNSDEKG 3117
Query: 285 DKFHQCFNGQV 295
++C + +
Sbjct: 3118 CGINECLDHSI 3128
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ ++ + I WP L ID ++Y+ D++L+ ++ +G H
Sbjct: 1586 RIERASMDGTLRTVIIQEKIYWPCGLTIDLPNRLIYFMDAYLDYLDFCDYNGQHRRQVIA 1645
Query: 161 -NAVLCHPNEL 170
N + HP L
Sbjct: 1646 GNLNVLHPYAL 1656
>gi|281348191|gb|EFB23775.1| hypothetical protein PANDA_004638 [Ailuropoda melanoleuca]
Length = 4540
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 157/326 (48%), Gaps = 31/326 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C SS +C+ CD DC +G DE C Q +C G C S KC
Sbjct: 2 CSSHQITC-SSGECIPNEYRCDHVRDCLDGTDEKDCQYPTCE--QLTCASGACYNSSQKC 58
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C C + QC C+PH ++CD DC D +DE
Sbjct: 59 DGKVDC-RDFSDE-NNCTKVCLQHEFQCD-GGVCLPHAYVCDHFPDCE-----DGSDEHS 110
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S CI + +CD E DC DN+DE+ + SH+ C+P E
Sbjct: 111 CTYETCRGNQFTCH-SGYCISQDSVCDGENDCK-----DNSDENGCESSSHHIRECYPGE 164
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+ + CDG DC GEDE G +C+ C L C ++C +P G M
Sbjct: 165 WACPESGKCIPIGNVCDGTIDCPGGEDENNSTKGRYCDVNL-CSLLSCEYQCHMSPNGGM 223
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C+CP G QN N CVD ++C I G CDQ C + + C C EGY L + C A
Sbjct: 224 CYCPPGFIVDQN-NTRNCVDFNDCQIWGVCDQICEDRIGHHQCHCAEGYVLEHQ-RHCKA 281
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNG 481
E AS+IFS+ D+ ++G
Sbjct: 282 --DISSEQASVIFSNGRDLLIGDIHG 305
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C P++ RC ++C+ LS CDG DC +G DE C CT QF C +CI +
Sbjct: 1041 CLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDEAG-CVINCTAFQFKCASEDRCISNRYH 1098
Query: 224 CDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE + C + QC CIP +W CD DC
Sbjct: 1099 CDGVSDC-SDHSDEIDCSTRPPGMCHPDEFQCQADGVCIPKSWECDGHSDCVFGS----- 1152
Query: 281 DEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ H C C S+ CI +WLCD + DC D +DE K
Sbjct: 1153 ----DEHHGC--APRTCPPSRFLCDNGNCIQRDWLCDGDNDCR-----DMSDE---KDCP 1198
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSP 393
A C + C + CV LS CDG DC NG DE P CN + + N C+H+C
Sbjct: 1199 TQAFHCPSWQWHCPGYSICVNLSAVCDGIFDCPNGTDESPLCNQDSCSDFNGGCTHQCVQ 1258
Query: 394 TPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
P GA C CP+G N +KT C D DEC + G C Q C N S+ C C E YTL DG
Sbjct: 1259 GPFGAQCLCPSGYLLANDSKT-CEDIDECNVPGFCSQHCFNMRGSFRCWCDEEYTLDTDG 1317
Query: 451 KSCTAV 456
++C
Sbjct: 1318 RTCKVT 1323
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 160/407 (39%), Gaps = 102/407 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
CHP ++C ++N C+ CD DC + DE P FC + C+ +F C G+CIP W
Sbjct: 2713 CHPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPLFCASHTCSSDEFPCTSGRCIPRHW 2772
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC + C + + +C S +CI W+CD + DC D+ D
Sbjct: 2773 YCDEEGDC-PDGSDEPATCEYLEATCLSNEFKCD-SGRCIREEWICDGDNDCG--DMSDE 2828
Query: 280 TDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----- 330
+ H C + + C S+KCIP +W+CD + DC+ D DE +
Sbjct: 2829 DERHHCDSHNCSSSEFLCVNNVPPSRKCIPQSWVCDGDADCT-----DGYDEHQNCTRRS 2883
Query: 331 ---KYFSHNAVLCHPNELRCGSSNQC--------------------------VALSKFCD 361
F+ N LC P+ RC N C + CD
Sbjct: 2884 CSGNDFTCNNGLCVPHSYRCDRRNDCGDYSDERDCSYPPCSENQFTCQNGLCIYKQYMCD 2943
Query: 362 GKPDCSNGEDE---------------------------GPFCNNKADCEN---------- 384
G+ DC +G DE G CN DC +
Sbjct: 2944 GENDCRDGSDELEHLCHTPETTCPPHQFRCDNGNCINMGEVCNRLNDCLDNSDEKGCGVN 3003
Query: 385 -------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHL 434
C C+ T C C G +K C D DEC C Q C N
Sbjct: 3004 ECNDPRLSGCDQNCTDTLTSFYCSCRPGYKLMSDKRSCDDIDECKETPFVCSQKCENVMG 3063
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SY+C C GY PDGKSC + +IFS+ +R + +G
Sbjct: 3064 SYICKCAPGYIREPDGKSCRQ---NSNIDPYLIFSNRYYLRNLTTDG 3107
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 140/338 (41%), Gaps = 90/338 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ I+WP+ + IDY D+LYW D+H
Sbjct: 3237 IGRVGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDR 3296
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3297 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRVVLVNTTHKPYDIHVYHPYRQPIV 3356
Query: 171 --RCGSSN-QCVALSKFCDGK-------PDCSNGEDEGP--FCNAECTPGQFSCGMG-KC 217
CG++N C L G PD G C C+ QF C KC
Sbjct: 3357 NNPCGTNNGGCSHLCLIRAGGNGFTCECPDDFQTLRLGATKVCLPRCSSTQFLCANSEKC 3416
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDEP C + C GQ QC C ++LC+ DC
Sbjct: 3417 IPIWWKCDGQRDC-SDGSDEPVLCPQRYCRLGQFQCK-DGNCTSSHFLCNAHQDCP---- 3470
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD E DC DN+DED ++
Sbjct: 3471 -DGSDEDHILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSDED---VYN 3520
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P +C ++N C+ CD DC + DE
Sbjct: 3521 CASRMCQPGYFKC-ANNHCIPQEWKCDVDNDCGDHSDE 3557
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
S+ +CV S CDG DC + DE G F N C P F+CG G+CIP WKCD DC
Sbjct: 926 SNGRCVPSSYRCDGVDDCQDNSDEHLCGEF-NNTCAPSAFTCGHGECIPAHWKCDKQYDC 984
Query: 231 LEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
+ DGSDE P+ C C + CIP +WLCD + DC+ D +DE +F
Sbjct: 985 V-DGSDEQNCPSQAPTSCPASLFACD-NHMCIPRSWLCDTDNDCA-----DGSDEKNCQF 1037
Query: 288 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+ C Q +C +CI +++CD + DC VD +DE + + C + +
Sbjct: 1038 TETCLPSQFRCP-DHRCIDLSFVCDGDKDC-----VDGSDE------AGCVINCTAFQFK 1085
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C S ++C++ CDG DCS+ DE
Sbjct: 1086 CASEDRCISNRYHCDGVSDCSDHSDE 1111
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C +S +C+ + CDG+ DCS+G DE C C GQF C G C +
Sbjct: 3403 CSSTQFLCANSEKCIPIWWKCDGQRDCSDGSDEPVLCPQRYCRLGQFQCKDGNCTSSHFL 3462
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE + H+C + + QCA +K+CIP W CD E DC DN+D
Sbjct: 3463 CNAHQDC-PDGSDEDHILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSD 3515
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C G +CA + CIP W CD + DC D++DE + SH
Sbjct: 3516 EDVYNCASRMCQPGYFKCA-NNHCIPQEWKCDVDNDCG-----DHSDEPMPECLSHRCD- 3568
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3569 -NHTEFSCRTNYRCIPQWAVCNGVDDCRDNSDE 3600
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/323 (30%), Positives = 134/323 (41%), Gaps = 18/323 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + C+ CD DC + DE C PG F C G C+PE C
Sbjct: 3648 CSESEFRC-DDHSCIPSRWVCDHTNDCGDNSDERDCEMKTCQPGYFQCQSGHCVPEHLTC 3706
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D SDE C + NG A +C H + DD D +DE+
Sbjct: 3707 DGIADCL-DASDEA-ACPTRFPNGAYCSATMFECKNHVCVRSSWKCDGDDDCGDGSDEE- 3763
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H C + + +C + + E+ DD D +DE + + + C NE
Sbjct: 3764 --LHLCLDVPCESPYRFRCDNNRCIYKHELCNHVDDCGDGSDEKEEHCLASTSRPCTENE 3821
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFC 402
+C S+ C++ CD DC + DE G + C C C+ G +C C
Sbjct: 3822 FKC-SNGHCISQHLVCDDVDDCGDHFDETGCNTGKERSCAENLCEQNCTQLNEGGFICSC 3880
Query: 403 PAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVN 457
G ++ C D +EC G C Q C NT SY CSC EG+ D GK C A
Sbjct: 3881 RPGFKASTLDRNSCDDINECEQFGVCPQNCQNTKGSYECSCAEGFRSESDQYGKRCAA-- 3938
Query: 458 VPQDEPASIIFSSTVDIRRIHLN 480
P ++ V IR+ +L+
Sbjct: 3939 --DGNPPLLLLPENVRIRKYNLS 3959
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------K 257
+C F C G+C+P S++CDG DC +D SDE H C CA S +
Sbjct: 917 QCGSFSFPCSNGRCVPSSYRCDGVDDC-QDNSDE-----HLCGEFNNTCAPSAFTCGHGE 970
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
CIP +W CD++ DC VD +DE C C + CIP +WLCD +
Sbjct: 971 CIPAHWKCDKQYDC-----VDGSDEQNCPSQAPTSCPASLFACD-NHMCIPRSWLCDTDN 1024
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC+ D +DE ++ C P++ RC ++C+ LS CDG DC +G DE
Sbjct: 1025 DCA-----DGSDEKNCQF----TETCLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDEA 1073
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 129/346 (37%), Gaps = 91/346 (26%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI------------------------ 140
+ ++E+A + G R P+V ++ WP+ L +D+ D+
Sbjct: 2419 NAKIERATLGGNFRIPIVNSSLVWPNGLTLDHENDLLYWADASLQKIERSTLTGTQREVI 2478
Query: 141 ----------------LYWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGS---- 174
+YW D + + + DGS L PN +R
Sbjct: 2479 VNTVFHPFSLTLYGQYIYWTDWNTQKIYRANKYDGSGQMALTMSLPFRPNGIRVAIEYHH 2538
Query: 175 ----SNQCVALSKFCDG--KPDCSNGE----DEGPFCNA------------ECTPGQFSC 212
SN C + C P E EG + A C +F+C
Sbjct: 2539 QPQCSNPCSEFNGGCSHICAPGPRGAECQCPHEGHWYLANNKKHCIVDNGTRCDSSKFTC 2598
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
G CI E WKCD DC DGSDE H C CA + +C+ +++ CD D
Sbjct: 2599 LNGHCISEQWKCDNDNDC-GDGSDELEGVCAFHTCHPTAFTCA-NGRCVQYHYRCDHYND 2656
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C DN+DE F C N V+ KCIP ++C+ +C +D D
Sbjct: 2657 CG-----DNSDEVGCLFRDC-NATVEFTCGNGKCIPLQFVCNGINNCRDNDTSD------ 2704
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+K S CHP ++C ++N C+ CD DC + DE P
Sbjct: 2705 EKNCSDRP--CHPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPL 2748
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 152/404 (37%), Gaps = 92/404 (22%)
Query: 40 TDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVSSVRL---- 82
+D D +K+ +NGT L N +SL F ++VS +RL
Sbjct: 650 SDTAKDMIYKQNINGTGREILTANRVESVESLTFDWISKNLYWTDASYRSVSVMRLADKS 709
Query: 83 RCAQINDLLNSWDLP----APEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
R A I L N + A IF D ++ +A G N P+V + WP+ L I
Sbjct: 710 RRAIIQKLNNPRSIVVHPIAGYIFFTDWLHPAKIMRAWSDGSNLLPIVNTTLGWPNGLAI 769
Query: 135 DYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHPNEL------------RCGSSN 176
D+ LYW D+ + +E DG H + HP L R G+
Sbjct: 770 DWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHIQQMTHPFGLTVFEDHVFFTDWRLGAIV 829
Query: 177 QC------------VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
+ ++ K +N + +CN P +P +
Sbjct: 830 RVRKTDGGDMRVIRSGITNIMHVKSYDANTQIGSNYCNRPTHPNGDCSHFCFPVPNFQRV 889
Query: 225 DG----------FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G + C ED S EP + QC + C+ + +C+P ++ CD D
Sbjct: 890 CGCPYGMSLTSNHLTCQEDPSREPP--VQQCGSFSFPCS-NGRCVPSSYRCD-----GVD 941
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDED 328
D DN+DE H C CA S +CIP +W CD++ DC VD +DE
Sbjct: 942 DCQDNSDE-----HLCGEFNNTCAPSAFTCGHGECIPAHWKCDKQYDC-----VDGSDE- 990
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ A P L ++ C+ S CD DC++G DE
Sbjct: 991 --QNCPSQAPTSCPASLFACDNHMCIPRSWLCDTDNDCADGSDE 1032
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E A M G++R LV +++ WP+ L IDY N D +YW D N +E+++ DG+ +
Sbjct: 4096 EPKIESAWMDGQHRKILVQEDLGWPTGLAIDYWNNDRIYWSDFKENNIETIKHDGTDRRI 4155
Query: 164 L 164
+
Sbjct: 4156 V 4156
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WPS + IDY +LY+ DS+L+ ++ +G H
Sbjct: 1470 RIERASMDGSLRTVIVEDKIFWPSGITIDYPNRLLYFIDSYLDYIDYCDYNGQHRKQVIA 1529
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1530 SDLILRHPYAL 1540
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + ++E+A M G NR LV + WP+ + +D +YW D + +E+V DG
Sbjct: 422 ESLSGEPKVERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWVDCRFDYIETVTYDGI 481
Query: 160 HNAVLCHPNEL 170
+ L
Sbjct: 482 QRKTVVQGGSL 492
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 52 LNGTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ G+ +L L +NQ L Q N+ S+ + I L +D + +F D
Sbjct: 1322 VTGSESLLLLVASQNQILADNITSQFHNIYSIVQNGSHIVAL--DFDSISGRVFWSDGSQ 1379
Query: 107 -RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++ A +G +R + + S+V+D+ LYW D L T+E ++DGSH VL
Sbjct: 1380 GKIWSAFQNGTDRRVIQNSGVTMTESIVVDWVGRNLYWTDYSLETIEVSKLDGSHRTVLI 1439
Query: 166 HPN 168
N
Sbjct: 1440 SRN 1442
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E++ + NR+ LV++ I P L +D++ +YW D L+ + + ++ + ++ +
Sbjct: 2104 KIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARIGIEAEESEIIGY 2163
Query: 167 PNEL 170
N
Sbjct: 2164 GNRY 2167
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 389 HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH------LSYVCSCTE 442
H+ S P G + Q C D + G C+ C +H L Y C CT
Sbjct: 531 HQTSLRPFGVTVYHSLRQPYVSNPCGDNN-----GGCEHVCVLSHRTDNDGLGYRCRCTL 585
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
G++L D + C AV +IFSS V +R I N S
Sbjct: 586 GFSLDVDNRHCVAVK------QFLIFSSEVAVRGIPFNLS 619
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
SH+ C+P E C S +C+ + CDG DC GEDE
Sbjct: 154 SHHIRECYPGEWACPESGKCIPIGNVCDGTIDCPGGEDE 192
>gi|41016740|dbj|BAC02725.2| vitellogenin receptor [Periplaneta americana]
Length = 1809
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/319 (35%), Positives = 160/319 (50%), Gaps = 31/319 (9%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPESWKCDGFVDCL-- 231
+ +C+ K CDG DC +G DE C P F C G+C +S+ CDG DC
Sbjct: 32 NGECINDDKHCDGTSDCKDGSDEFDCDMVLCKEPHWFRCHNGRCTSKSFHCDGVDDCGGW 91
Query: 232 --EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
E+ E + C + +C + CI +W+CD + DC +D +DE H+
Sbjct: 92 SDEEDCYEMESKPANCTADEWRC-VDNNCIFMDWVCDGKQDC-----MDGSDELQGCSHK 145
Query: 290 --CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFSHNAVLCHPNE 344
C +G V C + CIP+++LCD DC DN+DE + N
Sbjct: 146 MSCEDGFV-CG-NYHCIPNSFLCDGFDDCG-----DNSDEKLCPSVRNVPPEDCKLEKNL 198
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCP 403
C +CV + + CDG P C +G DEGP CN ++A C + CSH+C P+P+G +C C
Sbjct: 199 FLCADRQECVEVRELCDGTPHCYDGSDEGPACNASRAACPTVGCSHQCIPSPQGPLCVCQ 258
Query: 404 AGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G NKT CVD DEC+ G CDQ C N SY C C EGY + D +SC A
Sbjct: 259 VGYKTVDNKT-CVDVDECMEYGICDQRCRNLQGSYSCYCDEGYEVGSDKRSCKATG---- 313
Query: 462 EPASIIFSSTVDIRRIHLN 480
A ++FSST +IR ++++
Sbjct: 314 PDALMLFSSTKEIRGLYVH 332
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/357 (29%), Positives = 148/357 (41%), Gaps = 71/357 (19%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+ C+ S +CDG DC +G DE C P F C +G+CIPE W CDG DC++D
Sbjct: 1029 TGDCIVKSWYCDGSKDCEDGSDEENCEEVTCEPSAFKCALGQCIPEEWVCDGQSDCVDD- 1087
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----------- 283
+DE N C G C + +CI LC+ DC D +DED
Sbjct: 1088 TDEQNCAPPTCGPGAFSCG-NGRCIDQTLLCNNVDDCG-----DRSDEDPCRKPANEEEE 1141
Query: 284 -------WDKFHQCF----------------NGQVQCALS-----------------KKC 303
+ + C NG +C L KC
Sbjct: 1142 RLSVILCKEGEYTCHPHGKNVTICLPSSGRCNGTAECPLGDDERGCGCQDFQFTCYNGKC 1201
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDK-YFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
IP W+CD DC D +DE+ + + P + QC++LS C+
Sbjct: 1202 IPSEWVCDGINDCG-----DGSDENNARCQLPSSVGTPGPCTDYACNDGQCISLSLACNN 1256
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420
K +C +G DEG C+ + ++ C C PT G + + +C D DEC
Sbjct: 1257 KRNCEDGSDEGGQCDIACNAKS-PCDQICQPTLAAQDATVHKGYVLSSDGAKCGDIDECE 1315
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
I G+C Q C NT S+ CSC G+ LR D SC A+ EP IFS+ IR++
Sbjct: 1316 IGGACAQVCHNTRGSFSCSCHPGFQLRSDHVSCKALG----EPMQFIFSAGNQIRKV 1368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/232 (34%), Positives = 105/232 (45%), Gaps = 30/232 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG-EDEGPFCNAECTPGQFSCGMGKCIPES 221
V C +C + N C+ CDGK DC NG EDE C QF C G+CI +
Sbjct: 937 VHCSGEMFKCKTDNFCIPGRMRCDGKIDCPNGGEDELNCHKVNCRDDQFVCHNGQCISIT 996
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-----CIPHNWLCDEEMDCSTDDI 276
KCDG DC DGSDE + CF + L K CI +W CD DC
Sbjct: 997 KKCDGDSDC-RDGSDE-----YYCFEEECNEDLQFKCRTGDCIVKSWYCDGSKDCE---- 1046
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE+ + C +CAL +CIP W+CD + DC VD+TDE +
Sbjct: 1047 -DGSDEENCEEVTCEPSAFKCALG-QCIPEEWVCDGQSDC-----VDDTDEQ-----NCA 1094
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C P CG + +C+ + C+ DC + DE P C A+ E + S
Sbjct: 1095 PPTCGPGAFSCG-NGRCIDQTLLCNNVDDCGDRSDEDP-CRKPANEEEERLS 1144
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +AGM G V+ ++++P+ L IDY+ LYW D+ L +ES+++DGS V+
Sbjct: 455 IARAGMDGSQPEVFVSTDLRFPNGLTIDYHNSRLYWVDAKLLVIESIKLDGSDRRVV 511
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 21/36 (58%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
N C +CV + + CDG P C +G DEGP CNA
Sbjct: 197 NLFLCADRQECVEVRELCDGTPHCYDGSDEGPACNA 232
>gi|432859608|ref|XP_004069178.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oryzias latipes]
Length = 4553
Score = 145 bits (365), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 111/209 (53%), Gaps = 8/209 (3%)
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VD D C Q C CI W CD E DC D +DED D +
Sbjct: 24 VDALTRAIDASRSCSPKQFVCKDGVTCISKGWRCDREKDCP-----DGSDEDPDVCQHSS 78
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTP 395
A C PNE +CG + C+ +SK C+G PDC++G DEGP C ++C C C+ TP
Sbjct: 79 ASRCPPNEFQCGGTELCIHMSKLCNGAPDCTDGWDEGPHCREYMSNCTISTCKENCAVTP 138
Query: 396 RGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C+C +G + + C D DEC + G+C QTCTNT SY CSC EGY +PD +SC
Sbjct: 139 AGPACYCKSGYEISSDGKTCKDFDECSVYGTCSQTCTNTEGSYTCSCVEGYLSQPDNRSC 198
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A NVP D ++ +++ +I+ L+GS
Sbjct: 199 KAKNVPVDRLPVLLIANSQNIQATSLSGS 227
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 158/359 (44%), Gaps = 67/359 (18%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD DC NGEDE + C+ QF C +CIP W CDG DC D
Sbjct: 2706 SGRCIPMSWTCDKDNDCENGEDEAHCADKFCSASQFECANHRCIPSRWVCDGADDC-GDN 2764
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE + C ++ C QC S CIP W CD + DCS D D + F+ +
Sbjct: 2765 SDEGSKCKNKTCSPDAFQCPGSNTCIPQRWKCDGDKDCS--DGADESVRAGCFFNDTCSA 2822
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
+++CIP +++CD + DCS D +DE + + C P+E RC +
Sbjct: 2823 NEFMCQNRQCIPKHFVCDHDNDCS-----DGSDESPECEYPS----CRPSEFRCDNGRCL 2873
Query: 354 VALSKFCDGKPDCSNGEDEGP-----------------------------FCNNKADCEN 384
S CDG+ DC + DE P C++K DC +
Sbjct: 2874 SQASWECDGEFDCHDHSDEAPKNPRCTGAEKKCNNTGYACKNGNCINDTLLCDHKDDCGD 2933
Query: 385 LK-----------------CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGS 424
CS C G C C G ++ KT CVD DEC
Sbjct: 2934 GSDELNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFRLKDDGKT-CVDIDECTTVYP 2992
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C Q C NTH S+ C C EG+ L P + C +++ DE +IF++ +R+++L+GS
Sbjct: 2993 CTQRCINTHGSFHCLCVEGFQLSPQNPTICKSIS---DEEPFLIFANRYYLRKLNLDGS 3048
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 164/369 (44%), Gaps = 65/369 (17%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTP-GQFSCGMGKCI 218
+A C PN+ C +S +C+ S CD DC + DE FC C P QF+C G+CI
Sbjct: 938 SARTCPPNQFSC-ASGRCIPASWTCDLDDDCGDRSDEPAFCAYPTCFPLTQFTCNNGRCI 996
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI 276
+W+CD DC D SDE C H C + Q +C S +CIP W CD + DC +D+
Sbjct: 997 NINWRCDNDNDC-GDNSDEAG-CSHSCSSAQFKCN-SGRCIPDYWTCDGDNDCGDYSDET 1053
Query: 277 VDN-TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
N T+ D C + QC + CIP W CD + DC +D +DE + +H
Sbjct: 1054 HANCTNRDSRPPGGCHTDEFQCLMDGLCIPLRWRCDGDTDC-----MDMSDEKECEGVTH 1108
Query: 336 NAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------- 373
+C P + C S +C++ + CDG DC + DE
Sbjct: 1109 ---MCDPAVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCEALVCKLSHHVCANDSTIC 1165
Query: 374 ----PFCNNKADC--------------ENLKCSHKCSPTP-RGAMCFCPAGQ---NPNKT 411
C+ DC +N CSH C+ P G +C CP G + NKT
Sbjct: 1166 LPAEKLCDGTDDCPDGSDEKLCDLCSLDNGGCSHNCTVAPGEGVICSCPLGMELGSDNKT 1225
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C C C Q C S CSC EG+ L PD ++C + + + IIFS+
Sbjct: 1226 -CQIQSFCAKHLKCSQRCEQDKFSVKCSCYEGWELEPDMENCKSTDPFK---PFIIFSNR 1281
Query: 472 VDIRRIHLN 480
+IRRI LN
Sbjct: 1282 HEIRRIDLN 1290
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 129/270 (47%), Gaps = 34/270 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3413 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPNQFKCTISKRCIPRVW 3472
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3473 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPALWKCDGEADCG--DASDEPK 3529
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DED C
Sbjct: 3530 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----GCMPRKCS 3577
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
+E C ++ +C+A CDG DC++G DE C+ K + +C + C
Sbjct: 3578 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDENG-CDVKCAGDEFQC--------KNGHCI 3627
Query: 402 CPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
P + +C DAD IDGS + C N
Sbjct: 3628 ------PIRWRC-DADADCIDGSDEDRCEN 3650
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/337 (30%), Positives = 142/337 (42%), Gaps = 74/337 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +F+C G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDGCMPRKCSESEFACTNGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE N C +C + QC + CIP W CD + DC +D +DED
Sbjct: 3596 DGDHDC-ADGSDE-NGCDVKCAGDEFQCK-NGHCIPIRWRCDADADC-----IDGSDEDR 3647
Query: 285 ---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C +G+ QC + C P W CD E DC DN+DE+ ++ C
Sbjct: 3648 CENGVDRHCPHGEFQCN-NTLCKPLGWRCDGEDDCG-----DNSDENPEECVQFQ---CP 3698
Query: 342 P-NELRCGSSNQCVALSKFCDGKPDCSNGEDE---------------------------G 373
P + RC + C+ L+K CDG +C + DE
Sbjct: 3699 PTRQFRCYNDRVCLPLTKRCDGVNNCGDNSDEINCPAASPTPVCQKNEFQCSSGHCISSA 3758
Query: 374 PFCNNKADCEN-----LKCSHK-------------------CSPTPRGAMCFC-PAGQNP 408
CN DC++ + C K C + C C P Q+
Sbjct: 3759 LRCNYFNDCDDYGSDEISCQKKVLNDCSSNRTLCGDGDEAHCVMNGTDSFCSCKPGFQSN 3818
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
K +C D +EC G C C NT SY+C+C + +T
Sbjct: 3819 GKNRCEDKNECQQFGVCSHICNNTKGSYMCTCHKPFT 3855
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 149/363 (41%), Gaps = 91/363 (25%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
++E+A M G NR+ +T K + WP+ L +D Q ILYW D++ + +E V ++ S
Sbjct: 688 KIERAWMDGSNRNVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIEMVYLNSSGRKTVY 747
Query: 160 ------HNAVLCHP------NELRCGS--------------------------------- 174
H LCH NE R GS
Sbjct: 748 EGQELNHAFGLCHYKHFLFWNEYRSGSIFKLDTSTGTTTLLRNERPPIFEIRMYDAQQQQ 807
Query: 175 -SNQCVALSKFCD-------GKPDCSNGEDE------GPFCNA--------ECTPGQFSC 212
SN C + C G C+ ED+ C A +C PG+F+C
Sbjct: 808 GSNACRVYNGGCSSLCLAIPGGRQCACAEDQILDPADNTSCRANPSYVPPPQCQPGEFAC 867
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + +C + +CIP WLCD + DC
Sbjct: 868 KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPTDRFKCK-NNRCIPLRWLCDGDNDC 926
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D+ NT C Q CA S +CIP +W CD + DC D +DE
Sbjct: 927 GNDEDESNTTC---SARTCPPNQFSCA-SGRCIPASWTCDLDDDCG-----DRSDEPAFC 977
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHK 390
+ C P ++ +C+ ++ CD DC + DE C++ KC S +
Sbjct: 978 AYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSAQFKCNSGR 1032
Query: 391 CSP 393
C P
Sbjct: 1033 CIP 1035
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/340 (30%), Positives = 135/340 (39%), Gaps = 67/340 (19%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+C + C A S CDG DC + DE +C F+C G+CIP SW CD
Sbjct: 2660 KCEFTTLCYAPSWQCDGANDCGDFSDERNCPGSGKTKCPTPFFACPSGRCIPMSWTCDKD 2719
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-K 286
DC E+G DE + C Q +CA + +CIP W+CD DC DN+DE K
Sbjct: 2720 NDC-ENGEDEAHCADKFCSASQFECA-NHRCIPSRWVCDGADDCG-----DNSDEGSKCK 2772
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C QC S CIP W CD + DCS D DE N C NE
Sbjct: 2773 NKTCSPDAFQCPGSNTCIPQRWKCDGDKDCS-----DGADESVRAGCFFNDT-CSANEFM 2826
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------NKADCENLKCSHKCS-------- 392
C + QC+ CD DCS+G DE P C ++ C+N +C + S
Sbjct: 2827 C-QNRQCIPKHFVCDHDNDCSDGSDESPECEYPSCRPSEFRCDNGRCLSQASWECDGEFD 2885
Query: 393 ------PTPRGAMC------------FCPAGQNPNKTQCVDADECLIDGS---------- 424
P+ C C G N T D + DGS
Sbjct: 2886 CHDHSDEAPKNPRCTGAEKKCNNTGYACKNGNCINDTLLCDHKDDCGDGSDELNCFINEC 2945
Query: 425 -------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C + + + C C G+ L+ DGK+C ++
Sbjct: 2946 LNSKLSGCSQLCEDLKIGFKCRCHPGFRLKDDGKTCVDID 2985
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 156/422 (36%), Gaps = 106/422 (25%)
Query: 49 KRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER- 107
+ +L+ LA+++ N C + + +L A L+N+ L P +D R
Sbjct: 3099 RTLLSNPDGLAVDWIGGNLYWCDKGRDTIEVSKLNGAYRTVLINN-GLKEPRAVAVDVRY 3157
Query: 108 -------------LEKAGMHGENRSPLVTKNIQWPSSLVI--------------DY---- 136
+ + GM G NRS ++ NI WP+ L + DY
Sbjct: 3158 GYLYWTDWGDNAHIGRIGMDGTNRSVIIQDNITWPNGLTLDFVNDRIYWADAREDYIAFA 3217
Query: 137 -----------------------NQDILYWCDSHLNTVESV-RVDGSHNAVLC------- 165
++ +YW D ++ + G++ +L
Sbjct: 3218 SLDGTNRHTVLAEDIPHIFAMTLFEEYIYWTDWETKSINRAHKTLGTNKTMLISTLHRPM 3277
Query: 166 ---------------HPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTP 207
HP ++ G + LS K C +G C + CT
Sbjct: 3278 DIHIYHPYRQPRVEDHPCQINNGGCSNLCLLSPGGGYKCACPTNFYLSADGKHCLSNCTA 3337
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCD 266
QF C KCIP WKCD DC D SDEP C +C GQ QC S C ++CD
Sbjct: 3338 SQFVCKNDKCIPFWWKCDTEDDC-GDRSDEPADCPEFKCRPGQFQCG-SGICTNPAYICD 3395
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC DN+DE H C Q +C+ +CIP + C+ + +C + +
Sbjct: 3396 GDNDCQ-----DNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCP 3450
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
E V C PN+ +C S +C+ CD DC +G DE A+C +
Sbjct: 3451 E----------VTCAPNQFKCTISKRCIPRVWVCDRDNDCVDGSDE------PANCTQMT 3494
Query: 387 CS 388
C
Sbjct: 3495 CG 3496
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV KNIQWP+ L +DY + LYW D+ L+ + SVR++GS V
Sbjct: 4026 KIETAAMDGTMRETLVEKNIQWPTGLAVDYFNERLYWADAKLSLICSVRLNGSDAVV 4082
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R+ LV +I WP+ + IDY + LYWCD+ + +E + ++ N
Sbjct: 2034 RIERSRLDGTQRAVLVNVSISWPNGISIDYEEGRLYWCDARTDKIERINLETGEN 2088
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 92/231 (39%), Gaps = 54/231 (23%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G CI + CDG C + ++ + C ++ C G +C ++ +C+ H C+
Sbjct: 2530 EFECGNGDCINYTLTCDGMAHCKDKSDEKQSYCANRLCKKGYRRC-VNGRCVGHGSWCNG 2588
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD- 326
+ DC DN+DE + C Q QC CI ++ C++++DC DD D +
Sbjct: 2589 QDDCG-----DNSDELFCNTTLCTADQFQCR-DGSCISNSSKCNQKLDC--DDASDEMNC 2640
Query: 327 --EDWDKYFSHNA-----------VLCHPNELRCGSSN---------------------- 351
D YF LC+ +C +N
Sbjct: 2641 PATDCSSYFLLGVKGVVFQKCEFTTLCYAPSWQCDGANDCGDFSDERNCPGSGKTKCPTP 2700
Query: 352 -------QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS-HKCSPT 394
+C+ +S CD DC NGEDE + +C+ H+C P+
Sbjct: 2701 FFACPSGRCIPMSWTCDKDNDCENGEDEAHCADKFCSASQFECANHRCIPS 2751
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+A C PNE +CG + C+ +SK C+G PDC++G DEGP C
Sbjct: 78 SASRCPPNEFQCGGTELCIHMSKLCNGAPDCTDGWDEGPHC 118
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 357 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 414
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 205 CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDE-PNTCIH----QCFNGQVQCALSKKC 258
C+P QF C G CI + W+CD DC DGSDE P+ C H +C + QC ++ C
Sbjct: 37 CSPKQFVCKDGVTCISKGWRCDREKDC-PDGSDEDPDVCQHSSASRCPPNEFQCGGTELC 95
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
I + LC+ DC+ + WD+ C C +S
Sbjct: 96 IHMSKLCNGAPDCT---------DGWDEGPHCREYMSNCTIS 128
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T N WP+ L +DY + + W D+ + +
Sbjct: 1411 WDASLP-------RIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDARSDAI 1463
Query: 152 ESVRVDGS 159
S + DGS
Sbjct: 1464 YSAKYDGS 1471
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-----PEIFPL 104
L TH LA+++ RN ++ ++ RL + N ++ D P P + L
Sbjct: 1662 LPNTHGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVLHPTLGKL 1721
Query: 105 ----DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + A G NRS L T N + P L ID++ + LYW S +T+ ++DGS
Sbjct: 1722 YWTDGDNISMANTDGTNRSILFT-NQKGPVGLSIDFDTEQLYWISSGNSTINRCKLDGSA 1780
Query: 161 NAVL 164
VL
Sbjct: 1781 LEVL 1784
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-----FCNAECTPGQFSCGMGK-CI 218
C P + C C++ CD + DC +G DE P + C P +F CG + CI
Sbjct: 37 CSPKQFVCKDGVTCISKGWRCDREKDCPDGSDEDPDVCQHSSASRCPPNEFQCGGTELCI 96
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S C+G DC DG DE C
Sbjct: 97 HMSKLCNGAPDCT-DGWDEGPHC 118
>gi|383859306|ref|XP_003705136.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Megachile rotundata]
Length = 4572
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 163/335 (48%), Gaps = 39/335 (11%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK---C 217
C ++ CG + C+ + CD DC +G DE +C P F CG C
Sbjct: 100 CEAGQITCGQYIFNKTYCIPPHQRCDMTVDCVDGTDEAGCNYRKCQPDDFRCGGTTPELC 159
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
IP+ KC+G++DC +G DE I+ C Q +C +++CI + C+ + DC
Sbjct: 160 IPKEKKCNGYLDC-RNGRDEEKCAINMRPACRLDQFRCNSTQRCIDQSARCNYKDDCE-- 216
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DE+ F C Q +CA + CIP ++ CD DC D +DE S
Sbjct: 217 ---DNSDEENCNFQPCAINQFRCA-NALCIPKSYHCDGYKDCH-----DGSDEK-----S 262
Query: 335 HNAVLCHPNELRCGSSNQ-----CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
C N+ C + C+ S+ CDGKPDC + DEG C+ C L+C +
Sbjct: 263 CTMTSCPGNKFMCPKGTEDGKPLCIDRSQLCDGKPDCEDETDEGFACSTNM-CNTLRCHY 321
Query: 390 KCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC +P G +C+CPAG N ++T CVD DEC G C+Q C NT SY+CSC G+ L
Sbjct: 322 KCRASPTGGVCYCPAGWVLANDSRT-CVDRDECSEWGFCEQLCENTESSYICSCASGFVL 380
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ K C AV P + ++ + + R+ NG
Sbjct: 381 QGHNK-CRAVQHPGVK-LELLIAQERAVWRMSANG 413
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 121/379 (31%), Positives = 158/379 (41%), Gaps = 94/379 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S +CV +S CD + DC + DE N C+ QF+C +CIP +WKC
Sbjct: 1076 CGPNEFQC-KSGRCVPISFRCDSENDCGDYSDEVGCPNISCSANQFACANFRCIPNTWKC 1134
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD---------EEMDCSTD 274
D DC D SDE + C+ + C Q C S CIP +W+CD +EMDC
Sbjct: 1135 DSENDC-GDSSDEGDFCVAKTCSFFQFTCPRSGHCIPQSWVCDGDNDCFDQQDEMDCPPV 1193
Query: 275 DIVDN----TDEDW--------DKFHQCFNG------------------QVQCALSKKCI 304
+ D+ D C +G Q QC S CI
Sbjct: 1194 TCLSTQFTCADQKMCVLDSYKCDGISDCNDGSDEVGCPSLAPDQCNTDRQFQCVSSAICI 1253
Query: 305 PHNWLCDEEMDC-----------------------------------STDDIVDNTDEDW 329
P +W CD DC DD D +DED
Sbjct: 1254 PKSWYCDGTADCPDKSDEPTPCGQVSCQPGFFKCRNDKCVFKAYICDGKDDCGDGSDEDT 1313
Query: 330 DKYFSHNAVLCHPNELRCGS--------SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKA 380
+ + C E +C S +++CV ++ CDGK DC NG DEGP C+ +
Sbjct: 1314 ELH------ACTAPEFKCDSQQWKCPNVTDRCVNVTSVCDGKFDCPNGADEGPGCDIPEC 1367
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
CS+ C TP G C CPAG+ + C D DEC G C Q C N SY C
Sbjct: 1368 KYRGGYCSNGCIQTPLGKQCTCPAGEELGADGYACQDVDECEPPGRCSQICVNVKGSYYC 1427
Query: 439 SCTEGYTLRPDGKSCTAVN 457
+C +GY+L D +C A N
Sbjct: 1428 NCVDGYSLEGDKHTCKAFN 1446
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 99/208 (47%), Gaps = 19/208 (9%)
Query: 167 PNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
PN+L +NQ CV+ + CDG+ DC + DE C P +F C G+C+P S++CD
Sbjct: 1037 PNKLDFTCANQRCVSYTWVCDGENDCLDNSDEQNCTKPTCGPNEFQCKSGRCVPISFRCD 1096
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DW 284
DC D SDE C Q CA + +CIP+ W CD E DC D++DE D+
Sbjct: 1097 SENDC-GDYSDEVGCPNISCSANQFACA-NFRCIPNTWKCDSENDCG-----DSSDEGDF 1149
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q C S CIP +W+CD + DC D DE V C +
Sbjct: 1150 CVAKTCSFFQFTCPRSGHCIPQSWVCDGDNDC-----FDQQDE-----MDCPPVTCLSTQ 1199
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C CV S CDG DC++G DE
Sbjct: 1200 FTCADQKMCVLDSYKCDGISDCNDGSDE 1227
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 154/375 (41%), Gaps = 70/375 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P A C F C +CIP +W
Sbjct: 2835 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLYCALRTCPQSSFRCPNHRCIPATW 2894
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DCL+ + P C + CF C + CIP ++CD + DC +D+
Sbjct: 2895 YCDGDDDCLDGSDEPPGYCQSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDH 2948
Query: 280 TDEDWDKFHQCFNG------QVQCALSK-----KCIPHNWLCDEEMDC------------ 316
+DED + HQC + + C +K +CIP WLCD + DC
Sbjct: 2949 SDED--ERHQCNDRKCDEEVEFTCTANKVWNRAQCIPKKWLCDGDPDCVDGADENVTLLH 3006
Query: 317 ------------------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
DD D++DED N +P E C + N
Sbjct: 3007 CPTPTPCEFTCHNFKCIRKQFRCDGQDDCGDHSDEDGCPSKVKNTTCPNPGEFMCANGN- 3065
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNK--ADCENLKCSHKCSPTPRGAMCFCPAGQN--P 408
C+ C+ + DC++ DE CN A E +C+HKC TP C C G
Sbjct: 3066 CIDQQLVCNKEVDCADESDEPAHCNVDECARVEMNQCAHKCVDTPTSYYCECNPGYRLLA 3125
Query: 409 NKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASI 466
+ C D DEC C Q C NT S+ C C + R D +C + + I
Sbjct: 3126 DGKACEDIDECTETPQVCSQQCQNTPGSFYCKCNHYWYERASDEHTCKRRD---NIKPWI 3182
Query: 467 IFSSTVDIRRIHLNG 481
IF++ +R + ++
Sbjct: 3183 IFTNKYYVRNMSIDA 3197
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 142/328 (43%), Gaps = 36/328 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+A CD + DC + DE C F C G CI +C
Sbjct: 3748 CSESEFRC-DNGKCIASRWRCDSEDDCGDNSDENGCQTFVCKNYTFQCASGHCIASYLRC 3806
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE C + QC + C+ +CD DC D
Sbjct: 3807 DGTRDC-RDMSDEIGCPPRYPGGRYCPQSRFQCD-NNLCVYLTDICDGSDDCG-----DG 3859
Query: 280 TDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+DE+ + F + QCA + KCI LCD D+ D +DE+
Sbjct: 3860 SDENANMCANFKCDTTRRFQCA-NHKCIAKYQLCD-----GIDNCGDGSDENNMTMCFSR 3913
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKC-SP 393
C P ++ +CV SK CD DC + DE +NK E+ K CSH C +
Sbjct: 3914 IRPCDPITEYTCANKKCVDRSKLCDFADDCGDSSDELGCHHNKPCLESNKGGCSHYCHNI 3973
Query: 394 TPRGAMCFCPAG---QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
T G +C C +G N+ C D DEC C Q CTN + +Y CSC +G+ L D
Sbjct: 3974 TDGGYICACYSGYIISQSNRKHCEDVDECATGQHQCSQICTNMNGTYSCSCRQGFQLS-D 4032
Query: 450 GKS--CTAVNVPQDEPASIIFSSTVDIR 475
+S C A+ D A ++F++ IR
Sbjct: 4033 NRSGVCKAL----DTEAMVLFANGPGIR 4056
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 101/224 (45%), Gaps = 21/224 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM 214
DG C + RCG ++ C+ CDG+ DC +G DE C A C P F C
Sbjct: 3490 DGKTCRANCTAGQHRCGPPDEKCIPWYWQCDGEKDCKDGSDEPTSCPARVCRPSVFQCTN 3549
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G C P CDG DC D SDE C C + +C + +CI +W CD + DC
Sbjct: 3550 GNCRPSVAVCDGADDC-GDKSDEA-LCALDCGELEFKCKSNGRCIHESWKCDGDADCK-- 3605
Query: 275 DIVDNTDEDWDKFH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED H QC + +CI W+CD + DC D++DE
Sbjct: 3606 ---DGSDEDPAICHNRQCDPSTEFTCKNGRCIQKVWMCDSDNDCG-----DDSDEPAYMC 3657
Query: 333 FSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
N C RC G +N +C+ FCDGK DC +G DE P
Sbjct: 3658 RQRN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDELP 3698
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 103/220 (46%), Gaps = 27/220 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPE 220
A +C P+ +C + N C CDG DC + DE C +C +F C G+CI E
Sbjct: 3537 ARVCRPSVFQCTNGN-CRPSVAVCDGADDCGDKSDEA-LCALDCGELEFKCKSNGRCIHE 3594
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC +DGSDE H QC + +CI W+CD + DC D
Sbjct: 3595 SWKCDGDADC-KDGSDEDPAICHNRQCDPSTEFTCKNGRCIQKVWMCDSDNDCG-----D 3648
Query: 279 NTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++DE Q C G +C + +CIP CD + DC D +DE
Sbjct: 3649 DSDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWLFCDGKDDCR-----DGSDE-----LP 3698
Query: 335 HNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
N CHP+ + +C ++N+CV CD DC +G DE
Sbjct: 3699 ENCPKCHPDMDFKC-ANNRCVPKQWLCDFADDCGDGSDEA 3737
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G+NR LV+ I +P ++ + ++ +YW D L V N V
Sbjct: 2584 VREKIERSELDGKNRQVLVSATI-YPFAITV--FREHIYWTDLQLRGVYRAEKHTGANKV 2640
Query: 164 LC------HPNELRCGSS-------NQCVALSKFCD--------GKPDC-----SNGEDE 197
P +L S+ N C + CD G +C S +E
Sbjct: 2641 ELVKRLEDSPRDLHIYSAARQQCKVNPCNISNGGCDQSCHPGINGSAECKCDDNSRLVNE 2700
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
C N C +F+C G+CI W CDG DC + ++ N C H C + +C
Sbjct: 2701 DRMCVPKNVTCDSSKFACRNGRCISRMWACDGDDDCGDGSDEDTNYCSYHSCSPNEFRCN 2760
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD E DC D +DE+ + C G+ CA + +CIP + +C+
Sbjct: 2761 -NGRCIFKTWKCDYENDCR-----DGSDEEGCVYPPCAPGEFTCA-NYRCIPQSQVCNGI 2813
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+C + D T E + C PN L+C +N CV CDG DC + DE
Sbjct: 2814 NECKDNVTSDETHERCPR-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 2868
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P C + +C +H+C P
Sbjct: 2869 PLYCALRTCPQSSFRCPNHRCIPA 2892
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 149/396 (37%), Gaps = 116/396 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ + CD + DC +G DE C PG+F+C +CIP+S C
Sbjct: 2752 CSPNEFRC-NNGRCIFKTWKCDYENDCRDGSDEEGCVYPPCAPGEFTCANYRCIPQSQVC 2810
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G +C ++ SDE + + C ++C + C+ WLCD + DC DN+
Sbjct: 2811 NGINECKDNVTSDETHERCPRNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2865
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DE+ W + CF
Sbjct: 2866 DENPLYCALRTCPQSSFRCPNHRCIPATWYCDGDDDCLDGSDEPPGYCQSEGRTCFGDLF 2925
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +D++DED +++ ++ E C ++
Sbjct: 2926 TCD-NGNCIPRIYICDGDNDC-----LDHSDED-ERHQCNDRKCDEEVEFTCTANKVWNR 2978
Query: 352 -QCVALSKFCDGKPDCSNGEDEGP---FCNNKADCE----NLKCSHK------------- 390
QC+ CDG PDC +G DE C CE N KC K
Sbjct: 2979 AQCIPKKWLCDGDPDCVDGADENVTLLHCPTPTPCEFTCHNFKCIRKQFRCDGQDDCGDH 3038
Query: 391 -----CSPTPRGAMCFCPAGQNPNKTQCVD-----------ADE------CLID------ 422
C + C P C+D ADE C +D
Sbjct: 3039 SDEDGCPSKVKNTTCPNPGEFMCANGNCIDQQLVCNKEVDCADESDEPAHCNVDECARVE 3098
Query: 423 -GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C +T SY C C GY L DGK+C ++
Sbjct: 3099 MNQCAHKCVDTPTSYYCECNPGYRLLADGKACEDID 3134
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M G+ R LV+ I+ P +L IDY+ + +LYW D LNT+ES+ DGS+ V+
Sbjct: 4197 KIEIAWMDGDRRKQLVSDRIEQPIALAIDYSMNHVLYWADRKLNTIESIEQDGSNRKVI 4255
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS +++ I WP+ L +D +Y+ DS L+ +++ DG+
Sbjct: 1589 RIERIGMDGTNRSTIISTKIYWPNGLALDIANKRIYFADSKLDFIDTCLYDGTKRIQVLA 1648
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1649 SSHYLLHPHSL 1659
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 53 NGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
+ H E N N+ + ++ + SW L A + K G
Sbjct: 3271 HAKHLDVAELNGTNRKTLLTGIADPRAIVVHPGTGYLYFTSWHLQA--------YIGKMG 3322
Query: 113 MHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
M G N S ++T +I WP++L IDY D ++W D+HL+ + ++G HN
Sbjct: 3323 MDGSNFSRILTWEDDIAWPNALTIDYFTDRIFWADAHLDYIAFADLEG-HN 3372
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 21/111 (18%)
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQIND-------------LLNSWDLPAPEIFPLDERL 108
+ R +L + QNV+ R + + WD PA +
Sbjct: 800 IDSRKGTLNVLSTQNVTYRRTLLKNLKRPRAIVIHPNHGYIFFSEWDRPA--------NI 851
Query: 109 EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+A G N + WP+ L ID+ +D LYWCD+ L+ V+ ++G+
Sbjct: 852 SRAYTDGSNLIVFRNLTLGWPNGLAIDFAKDRLYWCDALLDHVQHSNLNGT 902
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL KA + G N P+VT I P + ID +YW DS +T++ V G++ ++
Sbjct: 2226 RLGKAYLDGSNWVPIVTSGISTPRDITIDLATHDVYWVDSKQDTIQKVSYTGANREII 2283
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 104/268 (38%), Gaps = 57/268 (21%)
Query: 9 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQS 68
Q C S CIP +W+CD + DC +D+ + L+ +F +Q
Sbjct: 1159 QFTCPRSGHCIPQSWVCDGDNDC------------FDQQDEMDCPPVTCLSTQFTCADQK 1206
Query: 69 LCFIQQQNVSSVRLRCAQINDLLNSWD-LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQ 127
+C + +C I+D + D + P + P + + + V+ I
Sbjct: 1207 MCVLDS-------YKCDGISDCNDGSDEVGCPSLAP-------DQCNTDRQFQCVSSAIC 1252
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDG 187
P S ++CD + + V C P +C +++CV + CDG
Sbjct: 1253 IPKS----------WYCDGTADCPDKSDEPTPCGQVSCQPGFFKC-RNDKCVFKAYICDG 1301
Query: 188 KPDCSNGEDEGPFCNAECTPGQFSCG---------MGKCIPESWKCDGFVDCLEDGSDEP 238
K DC +G DE +A CT +F C +C+ + CDG DC +G+DE
Sbjct: 1302 KDDCGDGSDEDTELHA-CTAPEFKCDSQQWKCPNVTDRCVNVTSVCDGKFDC-PNGADEG 1359
Query: 239 NTC--------IHQCFNGQVQCALSKKC 258
C C NG +Q L K+C
Sbjct: 1360 PGCDIPECKYRGGYCSNGCIQTPLGKQC 1387
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
VD + DK+ + N + + N + +Q Q + V + + ++ ++
Sbjct: 1430 VDGYSLEGDKHTCKAFNHSAAFLIISNRHTILVADLQDQALERVPINVENVVATVS--NM 1487
Query: 97 PAPEIFPLDERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
IF D +L+K G + ++ + L D+ LYW DS LNT+E
Sbjct: 1488 HTGTIFWSDMKLKKISRLDRGSDPEDVILTGLDLVEGLAYDWIGQNLYWLDSKLNTIEVA 1547
Query: 155 RVDGSHNAVLCHPN 168
R +G+ +L N
Sbjct: 1548 RENGADRMILVKEN 1561
>gi|301762274|ref|XP_002916562.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Ailuropoda melanoleuca]
Length = 4697
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/326 (36%), Positives = 157/326 (48%), Gaps = 31/326 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C SS +C+ CD DC +G DE C Q +C G C S KC
Sbjct: 157 CSSHQITC-SSGECIPNEYRCDHVRDCLDGTDEKDCQYPTCE--QLTCASGACYNSSQKC 213
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C C + QC C+PH ++CD DC D +DE
Sbjct: 214 DGKVDC-RDFSDE-NNCTKVCLQHEFQCD-GGVCLPHAYVCDHFPDCE-----DGSDEHS 265
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S CI + +CD E DC DN+DE+ + SH+ C+P E
Sbjct: 266 CTYETCRGNQFTCH-SGYCISQDSVCDGENDCK-----DNSDENGCESSSHHIRECYPGE 319
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+ + CDG DC GEDE G +C+ C L C ++C +P G M
Sbjct: 320 WACPESGKCIPIGNVCDGTIDCPGGEDENNSTKGRYCDVNL-CSLLSCEYQCHMSPNGGM 378
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C+CP G QN N CVD ++C I G CDQ C + + C C EGY L + C A
Sbjct: 379 CYCPPGFIVDQN-NTRNCVDFNDCQIWGVCDQICEDRIGHHQCHCAEGYVLEHQ-RHCKA 436
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNG 481
E AS+IFS+ D+ ++G
Sbjct: 437 --DISSEQASVIFSNGRDLLIGDIHG 460
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 141/306 (46%), Gaps = 37/306 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C P++ RC ++C+ LS CDG DC +G DE C CT QF C +CI +
Sbjct: 1196 CLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDEAG-CVINCTAFQFKCASEDRCISNRYH 1253
Query: 224 CDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE + C + QC CIP +W CD DC
Sbjct: 1254 CDGVSDC-SDHSDEIDCSTRPPGMCHPDEFQCQADGVCIPKSWECDGHSDCVFGS----- 1307
Query: 281 DEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ H C C S+ CI +WLCD + DC D +DE K
Sbjct: 1308 ----DEHHGC--APRTCPPSRFLCDNGNCIQRDWLCDGDNDCR-----DMSDE---KDCP 1353
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSP 393
A C + C + CV LS CDG DC NG DE P CN + + N C+H+C
Sbjct: 1354 TQAFHCPSWQWHCPGYSICVNLSAVCDGIFDCPNGTDESPLCNQDSCSDFNGGCTHQCVQ 1413
Query: 394 TPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
P GA C CP+G N +KT C D DEC + G C Q C N S+ C C E YTL DG
Sbjct: 1414 GPFGAQCLCPSGYLLANDSKT-CEDIDECNVPGFCSQHCFNMRGSFRCWCDEEYTLDTDG 1472
Query: 451 KSCTAV 456
++C
Sbjct: 1473 RTCKVT 1478
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 160/407 (39%), Gaps = 102/407 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
CHP ++C ++N C+ CD DC + DE P FC + C+ +F C G+CIP W
Sbjct: 2868 CHPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPLFCASHTCSSDEFPCTSGRCIPRHW 2927
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC + C + + +C S +CI W+CD + DC D+ D
Sbjct: 2928 YCDEEGDC-PDGSDEPATCEYLEATCLSNEFKCD-SGRCIREEWICDGDNDCG--DMSDE 2983
Query: 280 TDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----- 330
+ H C + + C S+KCIP +W+CD + DC+ D DE +
Sbjct: 2984 DERHHCDSHNCSSSEFLCVNNVPPSRKCIPQSWVCDGDADCT-----DGYDEHQNCTRRS 3038
Query: 331 ---KYFSHNAVLCHPNELRCGSSNQC--------------------------VALSKFCD 361
F+ N LC P+ RC N C + CD
Sbjct: 3039 CSGNDFTCNNGLCVPHSYRCDRRNDCGDYSDERDCSYPPCSENQFTCQNGLCIYKQYMCD 3098
Query: 362 GKPDCSNGEDE---------------------------GPFCNNKADCEN---------- 384
G+ DC +G DE G CN DC +
Sbjct: 3099 GENDCRDGSDELEHLCHTPETTCPPHQFRCDNGNCINMGEVCNRLNDCLDNSDEKGCGVN 3158
Query: 385 -------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHL 434
C C+ T C C G +K C D DEC C Q C N
Sbjct: 3159 ECNDPRLSGCDQNCTDTLTSFYCSCRPGYKLMSDKRSCDDIDECKETPFVCSQKCENVMG 3218
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SY+C C GY PDGKSC + +IFS+ +R + +G
Sbjct: 3219 SYICKCAPGYIREPDGKSCRQ---NSNIDPYLIFSNRYYLRNLTTDG 3262
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 140/338 (41%), Gaps = 90/338 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ I+WP+ + IDY D+LYW D+H
Sbjct: 3392 IGRVGMDGTNKSVIISTKIEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDR 3451
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3452 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRVVLVNTTHKPYDIHVYHPYRQPIV 3511
Query: 171 --RCGSSN-QCVALSKFCDGK-------PDCSNGEDEGP--FCNAECTPGQFSCGMG-KC 217
CG++N C L G PD G C C+ QF C KC
Sbjct: 3512 NNPCGTNNGGCSHLCLIRAGGNGFTCECPDDFQTLRLGATKVCLPRCSSTQFLCANSEKC 3571
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDEP C + C GQ QC C ++LC+ DC
Sbjct: 3572 IPIWWKCDGQRDC-SDGSDEPVLCPQRYCRLGQFQCK-DGNCTSSHFLCNAHQDCP---- 3625
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD E DC DN+DED ++
Sbjct: 3626 -DGSDEDHILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSDED---VYN 3675
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P +C ++N C+ CD DC + DE
Sbjct: 3676 CASRMCQPGYFKC-ANNHCIPQEWKCDVDNDCGDHSDE 3712
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 105/206 (50%), Gaps = 27/206 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
S+ +CV S CDG DC + DE G F N C P F+CG G+CIP WKCD DC
Sbjct: 1081 SNGRCVPSSYRCDGVDDCQDNSDEHLCGEF-NNTCAPSAFTCGHGECIPAHWKCDKQYDC 1139
Query: 231 LEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
+ DGSDE P+ C C + CIP +WLCD + DC+ D +DE +F
Sbjct: 1140 V-DGSDEQNCPSQAPTSCPASLFACD-NHMCIPRSWLCDTDNDCA-----DGSDEKNCQF 1192
Query: 288 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+ C Q +C +CI +++CD + DC VD +DE + + C + +
Sbjct: 1193 TETCLPSQFRCP-DHRCIDLSFVCDGDKDC-----VDGSDE------AGCVINCTAFQFK 1240
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C S ++C++ CDG DCS+ DE
Sbjct: 1241 CASEDRCISNRYHCDGVSDCSDHSDE 1266
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C +S +C+ + CDG+ DCS+G DE C C GQF C G C +
Sbjct: 3558 CSSTQFLCANSEKCIPIWWKCDGQRDCSDGSDEPVLCPQRYCRLGQFQCKDGNCTSSHFL 3617
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE + H+C + + QCA +K+CIP W CD E DC DN+D
Sbjct: 3618 CNAHQDC-PDGSDEDHILCEHHRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSD 3670
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSHNA 337
ED C G +CA + CIP W CD + DC D++DE + F H
Sbjct: 3671 EDVYNCASRMCQPGYFKCA-NNHCIPQEWKCDVDNDCG-----DHSDEPMPECREFLHRC 3724
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3725 D--NHTEFSCRTNYRCIPQWAVCNGVDDCRDNSDE 3757
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 143/527 (27%), Positives = 200/527 (37%), Gaps = 97/527 (18%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H+C + + QCA +K+CIP W CD E DC DN+DED R+ +
Sbjct: 3638 HRCESNEWQCA-NKRCIPEAWRCDSENDCG-----DNSDEDVYNCASRMCQPGY-FKCAN 3690
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
NH C Q+ +C ND + D P PE E L + H E
Sbjct: 3691 NH-----CIPQE-------WKCDVDNDCGDHSDEPMPE---CREFLHRCDNHTEFSCRTN 3735
Query: 123 TKNI-QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVAL 181
+ I QW +D D N+ E G E RC +++ C+ L
Sbjct: 3736 YRCIPQWAVCNGVD---------DCRDNSDEQ----GCEERTCKPSGEFRC-NNHHCIPL 3781
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
CDG DC + DE EC+ +F C CIP W CD DC D SDE +
Sbjct: 3782 RWKCDGHNDCGDHSDEENCVPRECSESEFRCDDHSCIPSRWVCDHTNDC-GDNSDERDCE 3840
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------------------- 282
+ C G QC S C+P + CD DC +D +DE
Sbjct: 3841 MKTCQPGYFQCQ-SGHCVPEHLTCDGIADC-----LDASDEAACPTRFPNGAYCSATMFE 3894
Query: 283 ---------DW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W ++ H C + + +C + + E+ DD
Sbjct: 3895 CKNHVCVRSSWKCDGDDDCGDGSDEELHLCLDVPCESPYRFRCDNNRCIYKHELCNHVDD 3954
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNK 379
D +DE + + + C NE +C S+ C++ CD DC + DE G +
Sbjct: 3955 CGDGSDEKEEHCLASTSRPCTENEFKC-SNGHCISQHLVCDDVDDCGDHFDETGCNTGKE 4013
Query: 380 ADCENLKCSHKCSPTPRGA-MCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLS 435
C C C+ G +C C G ++ C D +EC G C Q C NT S
Sbjct: 4014 RSCAENLCEQNCTQLNEGGFICSCRPGFKASTLDRNSCDDINECEQFGVCPQNCQNTKGS 4073
Query: 436 YVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Y CSC EG+ D GK C A P ++ V IR+ +L+
Sbjct: 4074 YECSCAEGFRSESDQYGKRCAA----DGNPPLLLLPENVRIRKYNLS 4116
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 86/179 (48%), Gaps = 31/179 (17%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------K 257
+C F C G+C+P S++CDG DC +D SDE H C CA S +
Sbjct: 1072 QCGSFSFPCSNGRCVPSSYRCDGVDDC-QDNSDE-----HLCGEFNNTCAPSAFTCGHGE 1125
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
CIP +W CD++ DC VD +DE C C + CIP +WLCD +
Sbjct: 1126 CIPAHWKCDKQYDC-----VDGSDEQNCPSQAPTSCPASLFACD-NHMCIPRSWLCDTDN 1179
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC+ D +DE ++ C P++ RC ++C+ LS CDG DC +G DE
Sbjct: 1180 DCA-----DGSDEKNCQF----TETCLPSQFRC-PDHRCIDLSFVCDGDKDCVDGSDEA 1228
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 83/171 (48%), Gaps = 21/171 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C F C G+CI SW+CDG DCL+D SDE C + Q C CIP+
Sbjct: 75 AKCGSEHFRCEDGQCISASWRCDGTRDCLDD-SDEFGCPSPSCKSDQFLCQGEGLCIPNF 133
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD ++DC D +DE C + Q+ C+ S +CIP+ + CD DC
Sbjct: 134 WECDGDLDCE-----DGSDEHRHCAGRTCSSHQITCS-SGECIPNEYRCDHVRDC----- 182
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+D TDE +Y + + C +S C S+ CDGK DC + DE
Sbjct: 183 LDGTDEKDCQYPTCEQLTC--------ASGACYNSSQKCDGKVDCRDFSDE 225
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 129/346 (37%), Gaps = 91/346 (26%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI------------------------ 140
+ ++E+A + G R P+V ++ WP+ L +D+ D+
Sbjct: 2574 NAKIERATLGGNFRIPIVNSSLVWPNGLTLDHENDLLYWADASLQKIERSTLTGTQREVI 2633
Query: 141 ----------------LYWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGS---- 174
+YW D + + + DGS L PN +R
Sbjct: 2634 VNTVFHPFSLTLYGQYIYWTDWNTQKIYRANKYDGSGQMALTMSLPFRPNGIRVAIEYHH 2693
Query: 175 ----SNQCVALSKFCDG--KPDCSNGE----DEGPFCNA------------ECTPGQFSC 212
SN C + C P E EG + A C +F+C
Sbjct: 2694 QPQCSNPCSEFNGGCSHICAPGPRGAECQCPHEGHWYLANNKKHCIVDNGTRCDSSKFTC 2753
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
G CI E WKCD DC DGSDE H C CA + +C+ +++ CD D
Sbjct: 2754 LNGHCISEQWKCDNDNDC-GDGSDELEGVCAFHTCHPTAFTCA-NGRCVQYHYRCDHYND 2811
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C DN+DE F C N V+ KCIP ++C+ +C +D D
Sbjct: 2812 CG-----DNSDEVGCLFRDC-NATVEFTCGNGKCIPLQFVCNGINNCRDNDTSD------ 2859
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+K S CHP ++C ++N C+ CD DC + DE P
Sbjct: 2860 EKNCSDRP--CHPGYVKCQTTNICIPHFYLCDEDNDCGDMSDESPL 2903
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 152/404 (37%), Gaps = 92/404 (22%)
Query: 40 TDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVSSVRL---- 82
+D D +K+ +NGT L N +SL F ++VS +RL
Sbjct: 805 SDTAKDMIYKQNINGTGREILTANRVESVESLTFDWISKNLYWTDASYRSVSVMRLADKS 864
Query: 83 RCAQINDLLNSWDLP----APEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
R A I L N + A IF D ++ +A G N P+V + WP+ L I
Sbjct: 865 RRAIIQKLNNPRSIVVHPIAGYIFFTDWLHPAKIMRAWSDGSNLLPIVNTTLGWPNGLAI 924
Query: 135 DYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHPNEL------------RCGSSN 176
D+ LYW D+ + +E DG H + HP L R G+
Sbjct: 925 DWGALRLYWVDAFFDKIEHSTFDGLDRRNLGHIQQMTHPFGLTVFEDHVFFTDWRLGAIV 984
Query: 177 QC------------VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
+ ++ K +N + +CN P +P +
Sbjct: 985 RVRKTDGGDMRVIRSGITNIMHVKSYDANTQIGSNYCNRPTHPNGDCSHFCFPVPNFQRV 1044
Query: 225 DG----------FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G + C ED S EP + QC + C+ + +C+P ++ CD D
Sbjct: 1045 CGCPYGMSLTSNHLTCQEDPSREPP--VQQCGSFSFPCS-NGRCVPSSYRCD-----GVD 1096
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDED 328
D DN+DE H C CA S +CIP +W CD++ DC VD +DE
Sbjct: 1097 DCQDNSDE-----HLCGEFNNTCAPSAFTCGHGECIPAHWKCDKQYDC-----VDGSDE- 1145
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ A P L ++ C+ S CD DC++G DE
Sbjct: 1146 --QNCPSQAPTSCPASLFACDNHMCIPRSWLCDTDNDCADGSDE 1187
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E A M G++R LV +++ WP+ L IDY N D +YW D N +E+++ DG+ +
Sbjct: 4253 EPKIESAWMDGQHRKILVQEDLGWPTGLAIDYWNNDRIYWSDFKENNIETIKHDGTDRRI 4312
Query: 164 L 164
+
Sbjct: 4313 V 4313
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WPS + IDY +LY+ DS+L+ ++ +G H
Sbjct: 1625 RIERASMDGSLRTVIVEDKIFWPSGITIDYPNRLLYFIDSYLDYIDYCDYNGQHRKQVIA 1684
Query: 161 -NAVLCHPNEL 170
+ +L HP L
Sbjct: 1685 SDLILRHPYAL 1695
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A M G NR LV + WP+ + +D +YW D + +E+V DG +
Sbjct: 582 EPKVERAFMDGTNRKDLVKTKLGWPAGITLDIVSKRVYWVDCRFDYIETVTYDGIQRKTV 641
Query: 165 CHPNEL 170
L
Sbjct: 642 VQGGSL 647
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Query: 52 LNGTHTLALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-- 106
+ G+ +L L +NQ L Q N+ S+ + I L +D + +F D
Sbjct: 1477 VTGSESLLLLVASQNQILADNITSQFHNIYSIVQNGSHIVAL--DFDSISGRVFWSDGSQ 1534
Query: 107 -RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++ A +G +R + + S+V+D+ LYW D L T+E ++DGSH VL
Sbjct: 1535 GKIWSAFQNGTDRRVIQNSGVTMTESIVVDWVGRNLYWTDYSLETIEVSKLDGSHRTVLI 1594
Query: 166 HPN 168
N
Sbjct: 1595 SRN 1597
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E++ + NR+ LV++ I P L +D++ +YW D L+ + + ++ + ++ +
Sbjct: 2259 KIERSFLDCTNRTVLVSEGIVTPRGLAVDHSNGYIYWVDDSLDIIARIGIEAEESEIIGY 2318
Query: 167 PNEL 170
N
Sbjct: 2319 GNRY 2322
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 389 HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH------LSYVCSCTE 442
H+ S P G + Q C D + G C+ C +H L Y C CT
Sbjct: 686 HQTSLRPFGVTVYHSLRQPYVSNPCGDNN-----GGCEHVCVLSHRTDNDGLGYRCRCTL 740
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
G++L D + C AV +IFSS V +R I N S
Sbjct: 741 GFSLDVDNRHCVAVK------QFLIFSSEVAVRGIPFNLS 774
>gi|81867523|sp|Q91ZX7.1|LRP1_MOUSE RecName: Full=Prolow-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; AltName: CD_antigen=CD91; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 85 kDa subunit; Short=LRP-85; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 515 kDa subunit; Short=LRP-515; Contains:
RecName: Full=Low-density lipoprotein receptor-related
protein 1 intracellular domain; Short=LRPICD; Flags:
Precursor
gi|15825005|gb|AAL09566.1|AF367720_1 lipoprotein receptor-related protein [Mus musculus]
Length = 4545
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDGK DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1150 SHPCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G + C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1209 CPLGMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---PFIIFSNRHEIRRIDLH 1286
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C +A+C + C H C PTP G C+C
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCN 137
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 138 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 196
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 197 DRPPVLLIANSQNILATYLSGA 218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2727 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2785
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C ++ CIP +++CD + D
Sbjct: 2786 HVCVPERWLCDGDKDCT-DGADESVTAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 2843
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D++DE
Sbjct: 2844 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DHSDE-- 2891
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2892 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2947
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2948 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADLDECSTTFPCSQLCINTHGSYKCL 3007
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3008 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3048
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 152/369 (41%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3596 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3646
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3647 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3694
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3695 ICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQR 3754
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3755 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRSGF 3814
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3815 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3874
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3875 DDNEIRSLF 3883
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3344 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3402
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3403 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3457
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3458 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3508
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3509 IPARWKCDGEDDCGDGSDE 3527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 896 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 954
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 955 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1008
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1009 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1064
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C C+ L CDG DC + DE CE + +H C P
Sbjct: 1065 SDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 1107
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2575 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2633
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2634 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2691
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2692 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCENGE-----DE------THCNKFCSEAQ 2739
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2740 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2774
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 765 SVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 796 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 853
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA + +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 854 --QCQPGEFACA-NNRCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 904
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 905 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 955
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 956 CDLDDDCGDRSDESASC 972
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4026 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4082
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3171 IGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVV 3227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2033 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2087
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2355 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2414
Query: 164 L 164
+
Sbjct: 2415 I 2415
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2642
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2643 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2686
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1407 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1459
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1460 YSARYDGSGHMEVLRGHEF 1478
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHC 109
>gi|124494256|ref|NP_032538.2| prolow-density lipoprotein receptor-related protein 1 precursor [Mus
musculus]
gi|15825096|gb|AAL09567.1| lipoprotein receptor-related protein [Mus musculus]
gi|148692566|gb|EDL24513.1| low density lipoprotein receptor-related protein 1 [Mus musculus]
Length = 4545
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDGK DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1150 SHPCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G + C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1209 CPLGMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---PFIIFSNRHEIRRIDLH 1286
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C +A+C + C H C PTP G C+C
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCN 137
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 138 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 196
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 197 DRPPVLLIANSQNILATYLSGA 218
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2727 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2785
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C ++ CIP +++CD + D
Sbjct: 2786 HVCVPERWLCDGDKDCT-DGADESVTAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 2843
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D++DE
Sbjct: 2844 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DHSDE-- 2891
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2892 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2947
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2948 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADLDECSTTFPCSQLCINTHGSYKCL 3007
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3008 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3048
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 152/369 (41%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3596 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3646
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3647 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3694
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3695 ICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQR 3754
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3755 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRSGF 3814
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3815 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3874
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3875 DDNEIRSLF 3883
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3344 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3402
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3403 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3457
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3458 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3508
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3509 IPARWKCDGEDDCGDGSDE 3527
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 896 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 954
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 955 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1008
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1009 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1064
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C C+ L CDG DC + DE CE + +H C P
Sbjct: 1065 SDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 1107
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2575 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2633
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2634 ASDEMNCSTTDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2691
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2692 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCENGE-----DE------THCNKFCSEAQ 2739
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2740 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2774
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 765 SVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 796 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 853
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA + +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 854 --QCQPGEFACA-NNRCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 904
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 905 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 955
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 956 CDLDDDCGDRSDESASC 972
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4026 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4082
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3171 IGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVV 3227
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2033 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2087
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2355 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2414
Query: 164 L 164
+
Sbjct: 2415 I 2415
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCST 2642
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2643 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2686
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1407 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1459
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1460 YSARYDGSGHMEVLRGHEF 1478
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHC 109
>gi|170578062|ref|XP_001894250.1| Low-density lipoprotein receptor-related protein [Brugia malayi]
gi|158599240|gb|EDP36913.1| Low-density lipoprotein receptor-related protein, putative [Brugia
malayi]
Length = 4043
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 153/317 (48%), Gaps = 30/317 (9%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPES 221
+C + +C +++C+ CD DC +G DE C N C+ QF+CG G+CIP
Sbjct: 1154 VCAARKFQC-DNHRCIPEQWKCDSDNDCGDGSDEKLEMCSNTTCSSNQFTCGNGRCIPVY 1212
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC ++ ++ C C Q +CA ++CI CD + DC D +
Sbjct: 1213 WLCDGDNDCYDNTDEDKERCPSALCRPDQFRCANKRQCISLKNHCDGQQDCD-----DGS 1267
Query: 281 DED--WDKFHQCFNGQVQCALSKKCIP--------HNWLCDEEMDCSTDDIVDNTDEDWD 330
DED + + +C + + CA CIP WLCD E DC DN+DED +
Sbjct: 1268 DEDSCFSQSDKCTHNEFTCASDGLCIPIAWKCDGQKTWLCDGENDCG-----DNSDEDAE 1322
Query: 331 KYFSHNAVL---CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENL 385
+ +L C + C GS + C+ CDGK C G DEG C +
Sbjct: 1323 HGCQRSQLLSIRCPFEHMACPGSPDICIPFHNLCDGKDHCPGGTDEGGRCARDLCAADRA 1382
Query: 386 KCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
C+ KC +P G +C CP G+ NKT+C +ECL SC Q CT+ + CSC EGY
Sbjct: 1383 GCAFKCHMSPDGPLCSCPFGEALVNKTKCEPENECLDARSCSQNCTDEKHGFTCSCEEGY 1442
Query: 445 TLRPDGKSCTAVNVPQD 461
TL D ++C + QD
Sbjct: 1443 TLDADKRTCKVTDGVQD 1459
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/293 (35%), Positives = 141/293 (48%), Gaps = 36/293 (12%)
Query: 165 CHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQ-FSCGMG 215
C P++ +C S C+ + CD DC++G DE P + G F C G
Sbjct: 78 CKPDQWQCDKYEWRSVSCIPEYQRCDNITDCADGSDEVDCPAPSVSCNVNDGSVFQCADG 137
Query: 216 K-CIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ C S KCDG DC D SDE ++C H CF Q +CA +CI +W+CD DC
Sbjct: 138 RQCFDISKKCDGKYDC-RDLSDEKDSCPHNHTACFQYQFRCADQSQCIQKSWVCDGSSDC 196
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+ D++DE +F QC G+ QC +K+C P + CD DC DN+DE+
Sbjct: 197 A-----DSSDEPSTCEFKQCSGGEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDEE-- 243
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
LC P + C S C+ +K CDGK DC +G DE +N C +L C
Sbjct: 244 ---GCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDCLDGFDEKNCSSNL--CPSLGCQAG 298
Query: 391 CSPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
C +P G +C CP G ++ C D +EC+ G CDQ C N + CSC
Sbjct: 299 CHSSPSGGVCTCPVGYKLDERFHRTCSDINECIEWGYCDQGCQNHRPGFTCSC 351
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 95/298 (31%), Positives = 133/298 (44%), Gaps = 32/298 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ +K CDG C +G DE +C G C G CIPE C
Sbjct: 3399 CSESEFRC-TDGRCIPGNKVCDGTLQCGDGIDESQCKLRDCNQGFMKCDDGTCIPEHRWC 3457
Query: 225 DGFVDCLEDGSDE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
D DC + SDE PN +C + +C S CIP ++CD + DC D
Sbjct: 3458 DRRRDC-PNASDESHCENYPNR--RECSPFEFECGNSV-CIPRKFICDGDNDCG-----D 3508
Query: 279 NTDEDWDKFHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
N+DE + + +CA S+ C+ LC+ DC D++DE S
Sbjct: 3509 NSDETNEHCKSALCDPPLRFRCAHSRLCLNILQLCNGVNDCGQ---FDHSDEHLSMCSSF 3565
Query: 336 NAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-----DCENLKCSH 389
+ C N+ +C ++ +C+ S CD DC + DE K + EN C H
Sbjct: 3566 SEYGDCTTNQFKC-TNGKCINASLACDHNDDCGDASDEIGCAKRKGITCETNNENGNCKH 3624
Query: 390 KCSPTPRGAMCFCPAGQNPNKTQ---CVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
C+ G C C G PN C+D DEC+ + +C Q C NT SY+C C E Y
Sbjct: 3625 LCTDVKDGYYCHCRDGFQPNPVDPYDCIDIDECMGNNTCTQICMNTKGSYLCRCLEDY 3682
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 121/262 (46%), Gaps = 58/262 (22%)
Query: 163 VLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGP---------------------- 199
VLC N + +N +C+ CDG+ DC +G DE
Sbjct: 1043 VLCASNSSQFLCANGRCIPNEWKCDGENDCLDGSDEVSFIAYHYQYCDMDVDDKKGSDDK 1102
Query: 200 --FCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ-CALS 255
F EC P C KCIP+ + CDG DC D SDE + C NG++ CA
Sbjct: 1103 PCFVEKECPPNTIRCNNTKKCIPQQYACDGDNDC-GDYSDED---VKYCKNGEIPVCAAR 1158
Query: 256 K------KCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHN 307
K +CIP W CD + DC D +DE + C + Q C + +CIP
Sbjct: 1159 KFQCDNHRCIPEQWKCDSDNDCG-----DGSDEKLEMCSNTTCSSNQFTCG-NGRCIPVY 1212
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
WLCD + DC DNTDED ++ S LC P++ RC + QC++L CDG+ DC
Sbjct: 1213 WLCDGDNDC-----YDNTDEDKERCPS---ALCRPDQFRCANKRQCISLKNHCDGQQDCD 1264
Query: 368 NGEDEGPFCNNKADCENLKCSH 389
+G DE C +++D KC+H
Sbjct: 1265 DGSDEDS-CFSQSD----KCTH 1281
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 109/233 (46%), Gaps = 36/233 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C LRC ++N C+ + CDG DC + DE FC N C C G+CIPE+W
Sbjct: 2871 CRGVRLRCPNTNICIQPADLCDGYNDCGDKADENKLFCMNQPCAMHYVRCPSGRCIPETW 2930
Query: 223 KCDGFVDCLEDGSDEPNT--------------CIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CDG DC E DE +T + QC NG KCI ++CD E
Sbjct: 2931 QCDGDNDCGEGAWDENHTNCTDSSGKRICLGEYLFQCDNG--------KCISRAFICDGE 2982
Query: 269 MDC--STDDIVDNTDEDWDKFHQCFNGQVQCALSK---KCIPHNWLCDEEMDCSTDDIVD 323
DC ++D+ + + + Q F+ + LS+ +CIP WLCD ++ C+
Sbjct: 2983 DDCGDASDESIIHNCGNRTCTEQEFHCKSNVHLSQPKYECIPKAWLCDGDVTCA------ 3036
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
N +++ + C+ E RC ++ C+ S CDG DC +G DE P C
Sbjct: 3037 NGEDESKELCGVEKKQCNKGEFRC-ANKHCIHASWECDGDNDCLDGSDEHPNC 3088
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 25/220 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGM-G 215
+++ C RC SS +C+ FC+G+ DC + DE P C+ G+F C G
Sbjct: 3310 SSIECRKGWTRCSSSYRCIPNWAFCNGQDDCRDNSDEIRDRCPTCD---DIGEFRCATSG 3366
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP+ W CD DC +D + +C C + +C +CIP N +CD + C
Sbjct: 3367 KCIPKRWMCDSENDCGDDSDETDPSCGGTSRPCSESEFRCT-DGRCIPGNKVCDGTLQCG 3425
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D DE K C G ++C CIP + CD DC + +DE +
Sbjct: 3426 -----DGIDESQCKLRDCNQGFMKCD-DGTCIPEHRWCDRRRDCP-----NASDESHCEN 3474
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ N C P E CG+S C+ CDG DC + DE
Sbjct: 3475 YP-NRRECSPFEFECGNS-VCIPRKFICDGDNDCGDNSDE 3512
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 109/214 (50%), Gaps = 19/214 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE C + CT +F C KCIP+
Sbjct: 3230 CDPWMFKCSATGKCIPKRFICDGDDDCGDRSDEADAICKNKERNCTAEEFRCSNHKCIPK 3289
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
WK D DGSDEP+ C +C G +C+ S +CIP+ C+ + DC DN
Sbjct: 3290 MWK-CDNDDDCGDGSDEPSECSSIECRKGWTRCSSSYRCIPNWAFCNGQDDCR-----DN 3343
Query: 280 TDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE D+ C + G+ +CA S KCIP W+CD E DC D++DE D +
Sbjct: 3344 SDEIRDRCPTCDDIGEFRCATSGKCIPKRWMCDSENDCG-----DDSDET-DPSCGGTSR 3397
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ +K CDG C +G DE
Sbjct: 3398 PCSESEFRC-TDGRCIPGNKVCDGTLQCGDGIDE 3430
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 83/198 (41%), Gaps = 22/198 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA----LSKKCIP 260
C+ F C GKCI WKCDG DC DG DE + C Q QC S CIP
Sbjct: 39 CSTNDFRCNDGKCIRFEWKCDGSGDC-SDGEDEKDCPHPGCKPDQWQCDKYEWRSVSCIP 97
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQV-QCALSKKCIPHNWLCDEEMDCST 318
CD DC+ D D D N G V QCA ++C + CD + DC
Sbjct: 98 EYQRCDNITDCA--DGSDEVDCPAPSVSCNVNDGSVFQCADGRQCFDISKKCDGKYDCR- 154
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
D+ D D HN C + RC +QC+ S CDG DC++ DE C
Sbjct: 155 -DLSDEKDS-----CPHNHTACFQYQFRCADQSQCIQKSWVCDGSSDCADSSDEPSTCEF 208
Query: 379 KA------DCENLKCSHK 390
K C+N +C +
Sbjct: 209 KQCSGGEFQCKNKRCQPR 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 2/113 (1%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCI 218
HN C + RC +QC+ S CDG DC++ DE C +C+ G+F C +C
Sbjct: 165 HNHTACFQYQFRCADQSQCIQKSWVCDGSSDCADSSDEPSTCEFKQCSGGEFQCKNKRCQ 224
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
P ++CD + DC D SDE + C Q C S CI LCD + DC
Sbjct: 225 PRKFRCDYYDDC-GDNSDEEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDC 276
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 81/168 (48%), Gaps = 34/168 (20%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGP-FCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLE 232
+C+ + CDG C+NGEDE C E C G+F C CI SW+CDG DCL
Sbjct: 3021 ECIPKAWLCDGDVTCANGEDESKELCGVEKKQCNKGEFRCANKHCIHASWECDGDNDCL- 3079
Query: 233 DGSDE-PNTCIHQCFNGQVQCALSKKCIPHNW---------LCDEEMDC---STDDIVDN 279
DGSDE PN QC QC+ + KCIP++W +E DC S ++ N
Sbjct: 3080 DGSDEHPNCTYSQCQPEFWQCS-NNKCIPNSWKCDGNDDCDDGSDEKDCTDKSASALIAN 3138
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ C GQ +C+ S +CI +CD DC +D +DE
Sbjct: 3139 S---------CSIGQFRCS-SGECIAEMKVCDRIYDC-----LDRSDE 3171
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 95/208 (45%), Gaps = 17/208 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESWKC 224
P +CG C+ALS C+GK DC++G DE P +CN C F C +CI +C
Sbjct: 2746 PYNFQCGDG-ICIALSATCNGKHDCADGSDEHPTYCNTRVCPEPYFLCSNRRCIEAELRC 2804
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ DC D SDE + T C +G +C+ + CI +CD DC + + D E
Sbjct: 2805 NNLDDC-GDNSDELDCITTSTTCPSGHFECS-NGHCINSTKVCDGHNDCHDEKVSDENKE 2862
Query: 283 DWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C +++C + CI LCD DC D DE +K F N C
Sbjct: 2863 TCPNLPIDCRGVRLRCPNTNICIQPADLCDGYNDCG-----DKADE--NKLFCMNQP-CA 2914
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNG 369
+ +RC S +C+ + CDG DC G
Sbjct: 2915 MHYVRC-PSGRCIPETWQCDGDNDCGEG 2941
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R LV I WP+++ +D + LY+ DS L+ ++ V DG S
Sbjct: 1599 RIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLDYIDFVNYDGNGRTQVLS 1658
Query: 160 HNAVLCHPNEL 170
+ HP+ L
Sbjct: 1659 STKFVQHPHAL 1669
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 11/133 (8%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQ---SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
D DK ++ +G + + ++RN+ S F++ + R+ N + +WD
Sbjct: 1445 DADKRTCKVTDGVQDMRIYVSNRNRIYWSDRFLENWHTFEARVE----NAIALAWDSVED 1500
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
I+ D R +K A +G N + +++ + + +D+ LYW DS LNT+E +
Sbjct: 1501 RIYWSDIREKKIYSATRNGTNVTVFISEGLDVTEGIALDWIARNLYWVDSSLNTIEVASL 1560
Query: 157 D-GSHNAVLCHPN 168
+ S AVL H N
Sbjct: 1561 ERSSARAVLIHEN 1573
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+++A + G +R +V +NI P+ L ID N ++YW D+ L+ + VR DG
Sbjct: 2248 IQRAYLDGSHRQVIVHENIAEPTDLTIDSNSHMIYWTDAKLDGIYRVRADGG 2299
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+A M G +R ++ + I P++L ID+ + LYW D + +ES DG + +
Sbjct: 2556 RIERANMAGGDRRVILKEGISLPAALAIDFREQRLYWADINKLNIESSDYDGRNRRTV 2613
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 155/415 (37%), Gaps = 107/415 (25%)
Query: 17 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQN 76
+CIP WLCD ++ C+ + DE ++ LC ++++
Sbjct: 3021 ECIPKAWLCDGDVTCANGE-----DE-----------------------SKELCGVEKKQ 3052
Query: 77 VSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDY 136
+ RCA + + SW+ + + G + P T + P
Sbjct: 3053 CNKGEFRCANKHCIHASWECDG----------DNDCLDGSDEHPNCTYSQCQPEFWQCSN 3102
Query: 137 NQDI------LYWCDSHLNTVESVRVDGSHNAVL---CHPNELRCGSSNQCVALSKFCDG 187
N+ I D + E D S +A++ C + RC SS +C+A K CD
Sbjct: 3103 NKCIPNSWKCDGNDDCDDGSDEKDCTDKSASALIANSCSIGQFRC-SSGECIAEMKVCDR 3161
Query: 188 KPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCI--PESWKCDGFVDCLEDGSDEPN----- 239
DC + DE C ECT + KC+ P ++CD F D D+ +
Sbjct: 3162 IYDCLDRSDESSKCFINECTTAEKPLCEQKCVDLPIDYRCDCFEGFALDKDDKKSCHDID 3221
Query: 240 ---TCIHQCFNGQVQCALSKKCIPHNWLC------------------DEEMDCSTDDIVD 278
C C +C+ + KCIP ++C ++E +C+ ++
Sbjct: 3222 ECEKCDKPCDPWMFKCSATGKCIPKRFICDGDDDCGDRSDEADAICKNKERNCTAEEFRC 3281
Query: 279 NTDEDWDKF---------------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+ + K +C G +C+ S +CIP+ C+ + DC
Sbjct: 3282 SNHKCIPKMWKCDNDDDCGDGSDEPSECSSIECRKGWTRCSSSYRCIPNWAFCNGQDDCR 3341
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE D+ + + + E RC +S +C+ CD + DC + DE
Sbjct: 3342 -----DNSDEIRDRCPTCDDI----GEFRCATSGKCIPKRWMCDSENDCGDDSDE 3387
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNA 162
D ++E A M G++R+ +V I P+SL +D +D +YW D VESV DG+
Sbjct: 3872 FDAKIECADMDGKHRNVIVKDLIYSPTSLAVDEGKDNRIYWADPKYRKVESVLPDGTKRT 3931
Query: 163 VLCHPNEL 170
+ N +
Sbjct: 3932 TVIIDNRM 3939
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E + G++R L++ + P+SL +D LYW D +++ +DGSH V+ H
Sbjct: 2204 IEVCQLDGKHRKILLSTKTETPTSLAVDPIGRYLYWADQGQKPSIQRAYLDGSHRQVIVH 2263
Query: 167 PN 168
N
Sbjct: 2264 EN 2265
>gi|395835250|ref|XP_003790595.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Otolemur garnettii]
Length = 4544
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCARHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 166/344 (48%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPASFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE + C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESVSAGCLYNSTCDDHEFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERSCHVNECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C +GY R D SC AV ++EP +IF++ +R+++L+GS
Sbjct: 3007 CVQGYAPRGGDPHSCKAVT--EEEPF-LIFANRYYLRKLNLDGS 3047
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 99/197 (50%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKTQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 82 TELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLNGPTCYCNNSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT ++ C C EGY L+PD +SC A N P D
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGAFTCGCVEGYLLQPDNRSCKAKNEPVDRFPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++ +
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEEC---SRF 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
C PN RC + C+ + + CDG +C +G DE P C +K + C N
Sbjct: 3694 TCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTPHCKDKKEFLCRNQH 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C G
Sbjct: 3754 CLTSSLRCNMFDDCGDGSDEEGCSIDPKLTSCATNASICGDEARCVHTEKAAYCACRPGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P ++ C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQSGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACAVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGT 4077
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERMVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANILTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKTQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACAVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
>gi|291409329|ref|XP_002720990.1| PREDICTED: low density lipoprotein receptor-related protein 1
[Oryctolagus cuniculus]
Length = 4544
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGHDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 81
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C +
Sbjct: 82 TELCVPMSRLCNGVQDCVDGSDEGPHCRELRGNCSRLGCQHHCVPTLSGPTCYCNSSFQL 141
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 142 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 200
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 201 LLIANSQNILATYLSGA 217
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 164/338 (48%), Gaps = 28/338 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC + DE C + C P FSC G
Sbjct: 2726 DEAHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDNSDEAAHCEGKTCGPASFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESITAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 328
C+ D +DE + ++ C + +CA + W C E DC +D++DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECXGENDC-----LDHSDEAP 2892
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-C 387
+ + + C+ + SS +CVA + C+G+ DC +G DE N+ L C
Sbjct: 2893 KNPHCTSPEHKCNVSSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLSHKLSGC 2952
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
S C G C C G + C D DEC C Q C N+H SY C C EGY
Sbjct: 2953 SQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINSHGSYKCLCVEGYA 3012
Query: 446 LRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +RR++L+GS
Sbjct: 3013 PRAGDPHSCKAVT---DEEPFLIFANRYYLRRLNLDGS 3047
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 149/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC + CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-NGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG C +G DE P C +K + C N +
Sbjct: 3694 MCPPNRPFRCKNDRVCLWIGRQCDGIDHCGDGSDEEDCEPPTAQTPHCKDKKEFLCGNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C C T + A C C G
Sbjct: 3754 CLSSSLRCNLLDDCGDGSDEEGCSMDPKLTSCATNASICGDEAXCVRTEKAAYCACRPGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
N P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 NTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +C+ E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANSRCVQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGAGEFRCRDGSCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPKCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------AHCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC + DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDNSDEAAHCEGKT 2773
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +C+ W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCVQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVV 4081
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSRRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G V+
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGDSREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECIGFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGAGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCV-DGSDEGPHC 108
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCVDGSDEGPHC 108
>gi|444509407|gb|ELV09244.1| Prolow-density lipoprotein receptor-related protein 1 [Tupaia
chinensis]
Length = 4570
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 951 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1009
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1010 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1064
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1065 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1114
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1115 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1173
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1174 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1233
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1234 K---PFIIFSNRHEIRRIDLH 1251
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 156/345 (45%), Gaps = 60/345 (17%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC +GEDE CN C+ QF C +CI + W CDG DC DG
Sbjct: 2682 SGRCIPMSWTCDKEDDCEHGEDE-THCNKFCSEAQFECQNHRCISKQWLCDGSDDC-GDG 2739
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQ 289
SDE C + C C + C+P WLCD + DC+ D DE
Sbjct: 2740 SDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCA-----DGADESIAAGCLYNST 2794
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + C +++CIP +++CD + DC+ D +DE + + C PNE RC +
Sbjct: 2795 CDDREFMCQ-NRQCIPKHFVCDHDRDCA-----DGSDESPECEYP----TCGPNEFRC-A 2843
Query: 350 SNQCVALSKF-CDGKPDCSNGEDEGP------------------------------FCNN 378
+ +C++ ++ CDG+ DC + DE P CN
Sbjct: 2844 NGRCLSSRQWECDGENDCHDQSDEAPKNPHCTSSENKCNASSQFLCNSGRCVAEALLCNG 2903
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+ DC + C G C + C D DEC C Q C NTH SY C
Sbjct: 2904 QDDCGDGSDERGCHAN--GCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKC 2961
Query: 439 SCTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2962 LCVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3003
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 100/197 (50%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 34 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 88
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC +G DEG C + +C L C H C PT G C+C
Sbjct: 89 TELCIPMSRLCNGVHDCMDGSDEGAHCLELRTNCSRLGCQHHCVPTLDGPTCYCNNSFQL 148
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 149 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 207
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 208 LLIANSQNILATYLSGA 224
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 150/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3564 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3622
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3623 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3673
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3674 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECVQ---F 3721
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3722 MCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTAHCKDKKEFLCRNQR 3781
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C G
Sbjct: 3782 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRPGF 3841
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3842 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3901
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3902 DDNEIRSLF 3910
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3440 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 3499
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3500 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 3556
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 3557 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 3604
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHKCSP 393
+E C ++ +C+A CDG DC++G DE C + D + +C S C P
Sbjct: 3605 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDEKD-CTPRCDMDQFQCKSGHCIP 3655
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 138/329 (41%), Gaps = 70/329 (21%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLEKA M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 685 RLEKAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 744
Query: 160 ------HNAVLCHPN------ELRCGSSNQC---------------------VALSKFCD 186
H LCH E R GS + + + D
Sbjct: 745 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLEGGVGGTPPTSVTLLRSERPPIFEIRMYD 804
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQC 245
+ +N P +C PG+F+C +CI E WKCDG DCL++ + P C H C
Sbjct: 805 AQQQQANPSYVPP---PQCQPGEFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTC 861
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ + +C + +CIP+ WLCD + DC + N C Q CA S +CIP
Sbjct: 862 PSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIP 916
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D +DE + C P ++ +C+ ++ CD D
Sbjct: 917 ISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRCININWRCDNDND 967
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C + DE CSH CS T
Sbjct: 968 CGDNSDEA------------GCSHSCSST 984
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 3479 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 3538
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC DGSDEP + C Q +C + +C+P W CD + DC D
Sbjct: 3539 RWKCDGEDDC-GDGSDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 3591
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE+ C + CA + +CI W CD + DC+ D +DE
Sbjct: 3592 NSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTP 3639
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ L CD DC +G DE
Sbjct: 3640 RCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 3672
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2551 NNGRCVSSMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2609
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2610 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2667
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2668 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2715
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2716 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2750
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 117/309 (37%), Gaps = 79/309 (25%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVLC---------------------- 165
P + +D +YW D ++ + G++ +L
Sbjct: 3260 PHIFALTLFEDYIYWTDWETKSINRAHKTTGTNKTLLISTLHRPMDLHVFHALRQPDVPN 3319
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQFSCGMGKCIPESW 222
HP ++ G+ + LS K C +G C + CT QF C KCIP W
Sbjct: 3320 HPCKVNTGACSTLCLLSPGGGHKCACPTNFYLGGDGRTCVSNCTASQFVCKNDKCIPFWW 3379
Query: 223 KCDGFVDCL---------------------------------------EDGSDEPNTCIH 243
KCD DC +D SDE N IH
Sbjct: 3380 KCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIH 3439
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C Q +C + +CIP + C+ + +C D DE C Q QC+++K+C
Sbjct: 3440 VCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPNQFQCSITKRC 3494
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP W+CD + DC VD +DE + + C +E RC S +C+ CDG+
Sbjct: 3495 IPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRCIPARWKCDGE 3545
Query: 364 PDCSNGEDE 372
DC +G DE
Sbjct: 3546 DDCGDGSDE 3554
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G
Sbjct: 4053 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNG 4104
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V
Sbjct: 3140 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHV 3195
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2009 RIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2063
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G CI
Sbjct: 34 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCI 93
Query: 219 PESWKCDGFVDCLEDGSDEPNTCI 242
P S C+G DC+ DGSDE C+
Sbjct: 94 PMSRLCNGVHDCM-DGSDEGAHCL 116
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2335 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVV 2391
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 354 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 411
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ C+
Sbjct: 2506 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVSSMLWCNG 2564
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2565 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2618
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2619 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2662
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKC 258
C+P QF+C CI + W+CDG DC DGSDE P + +C + C ++ C
Sbjct: 34 CSPKQFACRDQITCISKGWRCDGERDC-PDGSDEAPEICPQSKAQRCQPNEHNCLGTELC 92
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDE 282
IP + LC+ DC +D +DE
Sbjct: 93 IPMSRLCNGVHDC-----MDGSDE 111
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1372 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1424
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1425 YSARYDGSGHMEVLRGHEF 1443
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + C+ +S+ C+G DC +G DEG C
Sbjct: 76 AQRCQPNEHNCLGTELCIPMSRLCNGVHDCMDGSDEGAHC 115
>gi|242019639|ref|XP_002430267.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212515374|gb|EEB17529.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 4568
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 116/303 (38%), Positives = 148/303 (48%), Gaps = 22/303 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C S C+ + CDG DC + +DE C+ QF C + +CI ES+K
Sbjct: 1090 CAYFQFTCPRSGHCIPQTWVCDGDNDCFDNQDEEDCPPVTCSSTQFKCSDLKQCIQESYK 1149
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ QC Q QC S CIP W CD DC +
Sbjct: 1150 CDGISDCT-DGSDELGCPSLAPDQCDSEKQFQCQSSGICIPRAWHCDGTADCDDESDEPP 1208
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
T D C G +C S CI ++CD DC D +DED
Sbjct: 1209 TCGKVD----CQQGYFKCNNSH-CIFKAYICDGRDDCG-----DGSDEDARHACGPPPFG 1258
Query: 340 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPR 396
C+ NE +C G S +CV +S CDGK DC NG DEGP C+ A+C + CS+ C TP
Sbjct: 1259 CNGNEWQCPGVSERCVNISVVCDGKADCPNGADEGPGCD-LAECNHRSGLCSNGCKQTPV 1317
Query: 397 GAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
GA+C CP G+ + + C D +EC SC Q C NT SY C+C +GY L + C
Sbjct: 1318 GAVCTCPPGETLSNDTYTCQDLNECEKPESCSQHCHNTKGSYYCTCDDGYELELNKHFCK 1377
Query: 455 AVN 457
A+N
Sbjct: 1378 AIN 1380
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/336 (32%), Positives = 154/336 (45%), Gaps = 43/336 (12%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM---GKC 217
C +L CG + C K CD DC +G DE +C F CG +C
Sbjct: 38 CEVGQLSCGQYTWNKTYCYPPHKRCDQVVDCFDGSDEAECTYRKCQTDDFFCGRDTKSQC 97
Query: 218 IPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+P+ KCDG+ DC +E PN + C Q +C ++C+ +N C+ DC
Sbjct: 98 LPKEKKCDGYYDCRNKHDEESCGPNHGV-SCNLDQFRCTNGQRCVDNNLKCNHRNDCG-- 154
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DE+ F C GQ +C+ + CIP+++ CD DC +D +DE +
Sbjct: 155 ---DNSDEEGCNFPACHVGQFRCS-NALCIPNSFHCDGFRDC-----LDGSDE-----VN 200
Query: 335 HNAVLCHPNELRC-----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ C N+ C S +C++ S+ CDGK DC + DE C N C L C +
Sbjct: 201 CTGIACPGNKFLCPRGGPNGSPKCISRSQLCDGKKDCEDSADEETGCCN---CPLLGCEY 257
Query: 390 KCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC + G C+CP G N KT CVD DEC G C+Q C+N +Y CSCT GY L
Sbjct: 258 KCQASLTGGSCYCPEGSTISNDTKT-CVDRDECSEWGFCEQLCSNFPGNYKCSCTSGYVL 316
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C A P I+F+ + + G
Sbjct: 317 L-ENSYCRA---PNGSNVKILFAHDKSVWSLEQQGG 348
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 155/370 (41%), Gaps = 63/370 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPE 220
C + RCG+ N+C+ CD + DC++ DE C EC+ +F CG GKCIP+
Sbjct: 3682 CQDTDFRCGN-NRCIPKRWLCDHENDCADNSDETDALCKGVYRECSESEFRCGNGKCIPQ 3740
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC D SDE +C NG QCA S CI CD E DC N
Sbjct: 3741 RWRCDHDDDC-GDNSDESGCADFKCKNGSFQCA-SGHCIASYLRCDGEKDCRDLSDEKNC 3798
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD-------------------- 320
+ C Q QCA + CI H+ LCD DC +
Sbjct: 3799 PPRYPNGRYCPVTQFQCA-NHLCIQHSDLCDGADDCRDNSDENPSVCNNFNCDTLQRFQC 3857
Query: 321 ----------IVDNTDEDWDKYFSHNAVLC--------HPNELRCGSSNQCVALSKFCDG 362
+ D D D N+ +C E +C ++ +C+ +SK CD
Sbjct: 3858 DNHRCIPRYHLCDGVDNCGDGSDERNSTVCSFRNKPCNRDREFQC-ANKKCIDISKVCDF 3916
Query: 363 KPDCSNGEDEGPFCNNKADCE---NLKCSHKC------SPTPRGAMCFCPAG---QNPNK 410
DC + DE C+ +C+ C C + +G +C C G + NK
Sbjct: 3917 GDDCGDASDEKG-CHRAHECDAETRGGCEQNCENIDGPGSSLKGFICTCLPGFKISDKNK 3975
Query: 411 TQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
+C D DEC C Q CTN + +YVCSC EG+TL +N P E +++FS
Sbjct: 3976 KKCDDVDECETGTHKCSQICTNLNGTYVCSCREGFTLSDTLTGVCKLNEP--ESLTLLFS 4033
Query: 470 STVDIRRIHL 479
+ IR +
Sbjct: 4034 NGPQIRAYKM 4043
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 156/364 (42%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C PN L+C ++N CV CDG DC + DE A+ C F C +CIP +W
Sbjct: 2767 CPPNHLKCSNTNICVEPYWLCDGDNDCGDNSDEDSLHCAQRTCPQNSFRCPNHRCIPATW 2826
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P C + CF C + CIP ++CD + DC +DN
Sbjct: 2827 YCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2880
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2881 SDEDVR--HQCNDRKCDEETEFTCTENKAWNRAQCIPKKWICDGDPDC-----VDGADEN 2933
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------- 380
+ + V C ++ CG+ +C+ + CD DC +G DEG FCN +
Sbjct: 2934 STLHSCPSPVSCASDQFTCGNG-RCINMGWLCDHDNDCGDGTDEGKFCNAQYKTCTPEEF 2992
Query: 381 DCENLKCSHK---------CSPTPRGAMC-----FCPAGQNP-NKTQCVD---------- 415
C+N KC K C C CP GQ N +C+D
Sbjct: 2993 SCQNFKCIRKIYQCDGEDDCGDNSDEVGCSKTNSTCPNGQFRCNDGKCIDYHLVCNKVSD 3052
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
DEC + C+ C NT SY C C +GY L PDGK+C ++ +
Sbjct: 3053 CADDSDEPLHCNVDECAKVEIHQCNHKCVNTLTSYYCECNQGYKLMPDGKACRDIDECTE 3112
Query: 462 EPAS 465
P +
Sbjct: 3113 LPGA 3116
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 126/273 (46%), Gaps = 47/273 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTP-GQFSCGMGKCIPES 221
C E +C S+ +C+ S CDG PDC +G DE P N +C P +FSC G+CIP+
Sbjct: 3556 CPEIEFKCKSNGRCILNSWKCDGDPDCKDGSDEDPLMCHNRKCDPETEFSCKNGRCIPKL 3615
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C NG +C + +CIP CD + DC
Sbjct: 3616 WMCDFDNDCGDD-SDEPAFKCRQRNCTNGWQRCPGRTNYRCIPKWLFCDGKDDCR----- 3669
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DN+DE + +C + +C + +CIP WLCD E DC+ DN+DE D
Sbjct: 3670 DNSDEKPENCPKCQDTDFRCG-NNRCIPKRWLCDHENDCA-----DNSDET-DALCKGVY 3722
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPF------------ 375
C +E RCG+ +C+ CD DC + DE G F
Sbjct: 3723 RECSESEFRCGNG-KCIPQRWRCDHDDDCGDNSDESGCADFKCKNGSFQCASGHCIASYL 3781
Query: 376 -CNNKADCENLKCSHKCSPT-PRGAMCFCPAGQ 406
C+ + DC +L C P P G +CP Q
Sbjct: 3782 RCDGEKDCRDLSDEKNCPPRYPNGR--YCPVTQ 3812
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 110/233 (47%), Gaps = 24/233 (10%)
Query: 171 RC-GSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
RC G +N +C+ FCDGK DC + DE P +C F CG +CIP+ W CD
Sbjct: 3646 RCPGRTNYRCIPKWLFCDGKDDCRDNSDEKPENCPKCQDTDFRCGNNRCIPKRWLCDHEN 3705
Query: 229 DCLEDGSDEPNT----CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC D SDE + +C + +C + KCIP W CD + DC DN+DE
Sbjct: 3706 DC-ADNSDETDALCKGVYRECSESEFRCG-NGKCIPQRWRCDHDDDCG-----DNSDESG 3758
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+C NG QCA S CI CD E DC D +DE N C +
Sbjct: 3759 CADFKCKNGSFQCA-SGHCIASYLRCDGEKDCR-----DLSDEKNCPPRYPNGRYCPVTQ 3812
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSP 393
+C +++ C+ S CDG DC + DE P N +C+ L+ +H+C P
Sbjct: 3813 FQC-ANHLCIQHSDLCDGADDCRDNSDENPSVCNNFNCDTLQRFQCDNHRCIP 3864
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 98/204 (48%), Gaps = 31/204 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ + CDG DC + DE C + C+ +F C G+CIP ++KCD DC D S
Sbjct: 982 RCIPKAWVCDGDDDCLDNSDEEQNCTKSTCSLSEFQCSSGRCIPGTFKCDSENDC-GDYS 1040
Query: 236 DEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFH 288
DE C N V CALS+ +CIP+ W CD E DC D +DE D+
Sbjct: 1041 DETG-----CVN--VTCALSQFLCENNRCIPNAWKCDSENDCG-----DGSDEGDFCAQK 1088
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C Q C S CIP W+CD + DC DN DE+ V C + +C
Sbjct: 1089 TCAYFQFTCPRSGHCIPQTWVCDGDNDC-----FDNQDEE-----DCPPVTCSSTQFKCS 1138
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
QC+ S CDG DC++G DE
Sbjct: 1139 DLKQCIQESYKCDGISDCTDGSDE 1162
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 144/325 (44%), Gaps = 50/325 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E++ ++G R LV I +P ++ + N +YW D L N +
Sbjct: 2516 VREKIERSFLNGTFRQVLVAATI-YPFAITVHGN--YIYWTDLQLRGVYRAEKHTGANMI 2572
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQCVALSKFC--------DGKPDC-----SNGEDE 197
E V R++ S + + SN C + C +GK +C S +E
Sbjct: 2573 EMVKRLEDSPRDIHVFSKSRQMCDSNPCNINNGGCAQSCHPGPNGKAECKCDDNSKLVNE 2632
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
C N C +F C GKCI W CDG DC DGSDE N C H C + +C
Sbjct: 2633 NRMCVPKNLTCDSSKFYCKNGKCISRMWSCDGDNDC-GDGSDEDVNYCTYHSCNPNEFRC 2691
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +CI +W+CD E DC D +DE + C + + CA + +CIP + +C+
Sbjct: 2692 A-NGRCIFKSWVCDHENDCK-----DGSDELECVYPPCDSSEFTCA-NYRCIPMSQVCNG 2744
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC + D T E K C PN L+C ++N CV CDG DC + DE
Sbjct: 2745 VNDCKDNVTSDETHERCPK-----NTTCPPNHLKCSNTNICVEPYWLCDGDNDCGDNSDE 2799
Query: 373 GPFCNNKADC--ENLKC-SHKCSPT 394
+ C + +C +H+C P
Sbjct: 2800 DSLHCAQRTCPQNSFRCPNHRCIPA 2824
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 92/191 (48%), Gaps = 19/191 (9%)
Query: 197 EGPFCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
+G C A CT GQ CG KCIP WKCDG +DC +DGSDEP+TC + C NG QCA
Sbjct: 3468 DGKTCMANCTAGQHHCGGNDQKCIPWFWKCDGELDC-KDGSDEPSTCPVRTCRNGMFQCA 3526
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ C +CD DC D+ D + D C + +C + +CI ++W CD +
Sbjct: 3527 -NNNCTASANICDGVNDCG--DMSDEKNCDL----PCPEIEFKCKSNGRCILNSWKCDGD 3579
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE D HN E C + +C+ CD DC + DE
Sbjct: 3580 PDCK-----DGSDE--DPLMCHNRKCDPETEFSC-KNGRCIPKLWMCDFDNDCGDDSDEP 3631
Query: 374 PFCNNKADCEN 384
F + +C N
Sbjct: 3632 AFKCRQRNCTN 3642
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCG 213
DG C + CG ++Q C+ CDG+ DC +G DE C C G F C
Sbjct: 3467 ADGKTCMANCTAGQHHCGGNDQKCIPWFWKCDGELDCKDGSDEPSTCPVRTCRNGMFQCA 3526
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
C + CDG DC D SDE N C C + +C + +CI ++W CD + DC
Sbjct: 3527 NNNCTASANICDGVNDC-GDMSDEKN-CDLPCPEIEFKCKSNGRCILNSWKCDGDPDCK- 3583
Query: 274 DDIVDNTDEDWDKFH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DED H +C + +CIP W+CD + DC D++DE K
Sbjct: 3584 ----DGSDEDPLMCHNRKCDPETEFSCKNGRCIPKLWMCDFDNDCG-----DDSDEPAFK 3634
Query: 332 YFSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
N C RC G +N +C+ FCDGK DC + DE P
Sbjct: 3635 CRQRN---CTNGWQRCPGRTNYRCIPKWLFCDGKDDCRDNSDEKP 3676
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G ++ V C+ ++ RC + +CV + C+ + DC + DE C GQF C C
Sbjct: 120 GPNHGVSCNLDQFRCTNGQRCVDNNLKCNHRNDCGDNSDEEGCNFPACHVGQFRCSNALC 179
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDC 271
IP S+ CDGF DCL DGSDE N C + C S KCI + LCD + DC
Sbjct: 180 IPNSFHCDGFRDCL-DGSDEVNCTGIACPGNKFLCPRGGPNGSPKCISRSQLCDGKKDC 237
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + + G R+ + T + P+ L ID++ D +YW D+ LNT+ES+ DGS V+
Sbjct: 4180 KIESSWLDGSMRTTIATDGVGHPTGLAIDFSMDNKIYWADTKLNTIESMNYDGSGRQVII 4239
Query: 166 HPNELR 171
+ L+
Sbjct: 4240 KGDYLK 4245
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T N I WP++L IDY D +Y+ D+HL+ + ++G H
Sbjct: 3289 LQAYIGKIGMDGSNFTRILTWNDDIAWPNALTIDYFTDRIYFADAHLDYIAYTDLEGKHR 3348
Query: 162 AVL 164
++
Sbjct: 3349 HIV 3351
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA---- 162
R+E+ GM G NRS ++ I WP+ L +D +Y+ DS L+ ++ +GS
Sbjct: 1521 RIERVGMDGLNRSTIINTKIYWPNGLTLDVATKRIYFADSKLDYIDFCYYNGSGRQQVLA 1580
Query: 163 ---VLCHPNEL 170
L HP+ L
Sbjct: 1581 GSHYLLHPHSL 1591
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 4/133 (3%)
Query: 38 DNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP 97
D + + +K+F + +N + + N + + +++Q + V + + + + ++
Sbjct: 1365 DGYELELNKHFCKAINHSSAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMH 1422
Query: 98 APEIFPLDERLEKAGMHGENRSP--LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
IF D +L+K + P ++T + L D+ +YW DS LNT+E R
Sbjct: 1423 TGTIFWSDMKLKKISRLDRSSEPKDIITNGLDLVEGLAYDWIGGNIYWLDSRLNTIEVAR 1482
Query: 156 VDGSHNAVLCHPN 168
+GS VL N
Sbjct: 1483 ENGSDRMVLLKEN 1495
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 50/131 (38%), Gaps = 11/131 (8%)
Query: 32 STDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIND-- 89
S ++ V+ DW ++ + RN + +N+ R N
Sbjct: 717 SQNEGVEGLAVDWAAKNLYYIDSRKGTLNVLSMRNVTYKRTLLKNLKRPRAIVVHPNKGY 776
Query: 90 -LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+ WD PA + +A G + WP+ L +DY D LYWCD+ L
Sbjct: 777 IFFSEWDRPA--------NISRANSDGSGLMVFKNVTLGWPNGLALDYETDRLYWCDALL 828
Query: 149 NTVESVRVDGS 159
+ V+ ++G+
Sbjct: 829 DHVQHSHLNGT 839
>gi|195049411|ref|XP_001992716.1| GH24913 [Drosophila grimshawi]
gi|193893557|gb|EDV92423.1| GH24913 [Drosophila grimshawi]
Length = 4576
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 113/309 (36%), Positives = 152/309 (49%), Gaps = 35/309 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C + C+ S CDG DC + +DE C QF C + +C+ ES+K
Sbjct: 1083 CAYFQFTCPRTGHCIPQSWVCDGDDDCFDRQDEKDCPPISCLANQFKCADLRQCVEESYK 1142
Query: 224 CDGFVDCLEDGSDE---PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE P+ +QC +C + CIP W CD DCS D+
Sbjct: 1143 CDGIPDC-NDGSDELGCPSMGPNQCNLEKHFRCKSTGFCIPIAWHCDGSNDCS-----DH 1196
Query: 280 TDEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ C GQ+ CA + C+ ++CD + DC DN+DE +
Sbjct: 1197 SDEE-----DC--GQITCAQNFFKCNNTNCVFKAYICDGKDDCG-----DNSDEGTEHAC 1244
Query: 334 SHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
C + +C G + +CV ++ CD DC NG DEG C+ A+C + +CS
Sbjct: 1245 VPPPFKCPHGQWQCPGVAERCVNITSVCDDTMDCPNGADEGEGCD-LAECAHQTGQCSSF 1303
Query: 391 CSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP GA+C CP G + CVD +EC G C Q CTNT SY CSCT GY L P
Sbjct: 1304 CQKTPSGALCVCPPGSEIGQDGFTCVDTNECDPPGLCSQECTNTKGSYFCSCTPGYVLGP 1363
Query: 449 DGKSCTAVN 457
+ +C AVN
Sbjct: 1364 NKHTCKAVN 1372
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 117/342 (34%), Positives = 157/342 (45%), Gaps = 47/342 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAE--CTP 207
C +L CG + C+ CD DC + DE FCNA P
Sbjct: 14 CETPQLNCGQYVFNKTYCIPPHYRCDMIEDCQDKSDEAQCTHRKCQHTDVFCNAANGAAP 73
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
+ G C+P+ +CDG++DC G DE C Q +CA KCI C+
Sbjct: 74 AEGRL-TGPCVPKEKRCDGYLDC-RTGRDEDGCNGVACHLDQFRCANGHKCIDAALKCNH 131
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC DN+DE F C + Q +C + CIP+N+ CD DC+ D +DE
Sbjct: 132 RNDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DESDE 180
Query: 328 DWDKYFSHNAVLCHPNELRC--GSSN---QCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ A+ C N+ C G N +C+ S+ CDGK DC +G DE C+ A C
Sbjct: 181 -----ANCTAIACPDNKFLCPRGGVNGAPKCILKSQLCDGKRDCEDGSDEETACS-IASC 234
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
L C KC P+ G +C+C GQ+ P+ C+D DEC G CDQ CTNT SY C C
Sbjct: 235 PALSCEFKCGPSLTGGVCYCRPGQSLAPDNRTCIDLDECAEWGHCDQLCTNTPGSYTCQC 294
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+GYTL + K C A P +IF+ I R+ + S
Sbjct: 295 AQGYTLINESK-CIA---PDANNLQLIFAHDRAIMRMFAHDS 332
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 147/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C PN L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2760 CPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2819
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2820 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2873
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2874 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2926
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2927 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSPLEF 2985
Query: 382 -CENLKC--------------SHKCSPTPRGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC H + C GQ QC+D
Sbjct: 2986 TCQNFKCIRNQYRCDGEDDCGDHSDEVNCKKENVTCAHGQFACTNGQCIDYSLVCNKVAD 3045
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
DEC + C C +T Y C C EGY L DGK+C V+ +
Sbjct: 3046 CTDESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 3105
Query: 462 EPAS 465
+P +
Sbjct: 3106 QPGA 3109
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 95/198 (47%), Gaps = 19/198 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S CDG DC + DE C C +F C G+CIP +++CD DC D S
Sbjct: 975 RCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCKSGRCIPLNFRCDQENDC-GDNS 1033
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE + C Q CA + +CIP W CD E DC D++DE D+ C Q
Sbjct: 1034 DEVDCGNVTCATSQFACA-NGRCIPSMWKCDSENDCG-----DSSDEGDFCAEKTCAYFQ 1087
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C + CIP +W+CD + DC D DE + C N+ +C QCV
Sbjct: 1088 FTCPRTGHCIPQSWVCDGDDDC-----FDRQDEK-----DCPPISCLANQFKCADLRQCV 1137
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CDG PDC++G DE
Sbjct: 1138 EESYKCDGIPDCNDGSDE 1155
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 155/373 (41%), Gaps = 83/373 (22%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3684 DFKCGN-NRCIPKQWMCDFADDCGDASDENDAICKGRYRECSESEFRCGNGKCISSRWQC 3742
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE N +QC NG QCA S CI + CD + DC
Sbjct: 3743 DHEDDC-GDNSDEMNCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVGCPPRF 3800
Query: 272 --------------------------STDDIVDNTDEDWDKFHQCFN----GQVQCALSK 301
TDD D +DED K FN + QCA +
Sbjct: 3801 PGGRFCPESRFQCTNNLCVSLTDLCDGTDDCGDGSDED-PKVCSDFNCDTLRRFQCA-NH 3858
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CV 354
+C+ +CD D+ D +DE+ N LC + C Q C+
Sbjct: 3859 RCVARYQICD-----GIDNCGDGSDEN-------NMTLCASKQKPCDLYTQYQCANKHCI 3906
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QN 407
++ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 3907 ERAQVCDFSDDCGDASDE-LGCHHTSSCSEQNRGGCQHHCHNLTDGGYICTCYPGYIIAP 3965
Query: 408 PNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
NK +C D DEC +C C N + +Y CSC +G+ L DG S V + + +
Sbjct: 3966 DNKKRCADVDECATRQHTCSHQCHNMNGTYSCSCRDGFHLS-DGSS--GVCKAEKDDVIL 4022
Query: 467 IFSSTVDIRRIHL 479
+F++ +IR + L
Sbjct: 4023 VFANGPEIRGLDL 4035
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 139/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E+A + G NR LV I +P ++ + N +YW D L V N V
Sbjct: 2509 VREKIERADLDGRNRELLVAATI-YPFAITVFRN--YIYWTDVQLRGVYRAEKHTGANMV 2565
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R SS N C + C +GK +C S +E
Sbjct: 2566 EMVKRLEDSPRDIRIFSSDRQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDENSKVVNE 2625
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C GKCI W CDG DC ++ +E N C H C + +C
Sbjct: 2626 GRMCAPRNNTCESSKFYCQNGKCISRMWSCDGDDDCGDNSDEELNYCAYHSCSPNEFRCN 2685
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 2686 -NGRCIFKSWKCDHENDCK-----DGSDELNCSYPPCVDGEFTCA-NGRCIPQAQVCNGV 2738
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C PN L+C +N CV CDG DC + DE
Sbjct: 2739 NDCKDNATSDETHERCPM-----NTTCPPNHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2793
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2794 PLHCGQRTCPTNSFRCPNHRCIPA 2817
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 95/215 (44%), Gaps = 36/215 (16%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
GS +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 3482 GSDEKCIPWFWKCDGEKDCKDGSDEPSTCTPRHCRAGTFQCKNTNCTPSATICDGVDDC- 3540
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--------- 282
DGSDE N C C +C S +CI +W CD + DC D +DE
Sbjct: 3541 GDGSDEQN-CELPCPLSDFKCKTSGRCILDSWRCDGDADCK-----DGSDEDPLVCHKRS 3594
Query: 283 -DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
D D C NG +CIP W+CD + DC D++DE N C
Sbjct: 3595 CDPDTEFSCKNG--------RCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CT 3638
Query: 342 PNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEGP 374
RC G SN +C+ FCDGK DC + DE P
Sbjct: 3639 TGWQRCPGQSNYRCIPKWLFCDGKDDCRDNSDELP 3673
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 157 DGSHNAVLCHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
DGS C P R G+ + C + CDG DC +G DE C C F C
Sbjct: 3502 DGSDEPSTCTPRHCRAGTFQCKNTNCTPSATICDGVDDCGDGSDEQN-CELPCPLSDFKC 3560
Query: 213 GM-GKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCA-LSKKCIPHNWLCDEEM 269
G+CI +SW+CDG DC +DGSDE P C + + + + + +CIP W+CD +
Sbjct: 3561 KTSGRCILDSWRCDGDADC-KDGSDEDPLVCHKRSCDPDTEFSCKNGRCIPQLWMCDFDN 3619
Query: 270 DCSTDDIVDNTDEDWDKFHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D++DE Q C G +C + +CIP CD + DC DN+
Sbjct: 3620 DCG-----DDSDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR-----DNS 3669
Query: 326 DEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE N C + +CG +N+C+ CD DC + DE
Sbjct: 3670 DE-----LPDNCPKCSAETDFKCG-NNRCIPKQWMCDFADDCGDASDE 3711
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 2677 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELNCSYPPCVDGEFTCANGRCIPQAQVC 2735
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2736 NGVNDCKDNATSDETHERCPMNTTCPPNHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2790
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2791 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2850
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2851 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2903
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2904 AQCIPKKWICDGDPDCVDGADENTTLHN 2931
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP+TC C G QC +
Sbjct: 3469 CIANCTAGQHLCGGSDEKCIPWFWKCDGEKDC-KDGSDEPSTCTPRHCRAGTFQCK-NTN 3526
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE + C +C S +CI +W CD + DC
Sbjct: 3527 CTPSATICD-----GVDDCGDGSDEQNCEL-PCPLSDFKCKTSGRCILDSWRCDGDADCK 3580
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCSNGED 371
D +DED ++CH E C + +C+ CD DC + D
Sbjct: 3581 -----DGSDED--------PLVCHKRSCDPDTEFSC-KNGRCIPQLWMCDFDNDCGDDSD 3626
Query: 372 EGPFCNNKADC 382
E + + +C
Sbjct: 3627 EPAYMCRQRNC 3637
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY QD I+YW D+ LN +ES+R DGS +
Sbjct: 4172 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYAQDHIIYWVDTKLNAIESMRADGSRRKAIV 4231
Query: 166 HPNELR 171
++LR
Sbjct: 4232 KGDQLR 4237
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ DG N V CH ++ RC + ++C+ + C+ + DC + DE
Sbjct: 89 CDGYLDCRTGRDEDGC-NGVACHLDQFRCANGHKCIDAALKCNHRNDCGDNSDEQGCNFP 147
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + KC
Sbjct: 148 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADESDEANCTAIACPDNKFLCPRGGVNGAPKC 206
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 207 ILKSQLCDGKRDCE-----DGSDEE 226
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C GQ C S +KCIP W CD E DC D +DE C G QC
Sbjct: 3468 TCIANCTAGQHLCGGSDEKCIPWFWKCDGEKDCK-----DGSDEPSTCTPRHCRAGTFQC 3522
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C +S +C+ S
Sbjct: 3523 K-NTNCTPSATICD-----GVDDCGDGSDE------QNCELPCPLSDFKCKTSGRCILDS 3570
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P +K C+
Sbjct: 3571 WRCDGDADCKDGSDEDPLVCHKRSCD 3596
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 3287 LQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYTDLEGRHR 3346
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
++ N S ALS F D
Sbjct: 3347 HIVLSGN-----SVPHVFALSLFDD 3366
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G PLVT I P L ID ++W DS L+T++ + +G + V+
Sbjct: 2152 RIGKAMLDGSKWQPLVTSGISLPRDLTIDMQTHDVFWVDSKLDTIQKISYNGVNRKVI 2209
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 688 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 747
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 748 RPRAIVVHPNRGYI--FFSEWDRPA--------NITRANTDGTGLLVFRNVTLGWPNGLS 797
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 798 IDFKEDRVYWCDALLDHVQHANLDGT 823
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 35 DIVDNTDEDW-DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNS 93
D+V+ DW K + + +T+ + + + L +++ N++ R C
Sbjct: 1446 DLVEGLAYDWIAKNLYWLDSKLNTIEVSAENGSNRLVLVRE-NITQPRGMCID------- 1497
Query: 94 WDLPAPE---IFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDS 146
P+PE IF D R+E+ GM G R ++ I WP+ L +D +Y+ DS
Sbjct: 1498 ---PSPEARFIFWTDWGENPRVERIGMDGTMRKTIINTKIYWPNGLTLDIATKRVYFADS 1554
Query: 147 HLNTVESVRVDGS-------HNAVLCHPNEL 170
L+ ++ +G+ + L HP+ L
Sbjct: 1555 KLDFIDFCYYNGTGRQQVLASSHYLLHPHSL 1585
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K + PS L IDY+ LYW D+ +E +DG +
Sbjct: 2464 FGTSGKIFRTTMAGSLKRAIVDKELSQPSGLAIDYDDRKLYWTDAVREKIERADLDGRNR 2523
Query: 162 AVL 164
+L
Sbjct: 2524 ELL 2526
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 4/126 (3%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+K+ + +N T + N + + +++Q + V + + + + ++ IF
Sbjct: 1364 NKHTCKAVNHTAAFLIISNRHSILVADLKEQGLERVPIIVENV--VATASNMHTGTIFWS 1421
Query: 105 DERLEKAGM--HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
D +L+K HG ++ + L D+ LYW DS LNT+E +GS+
Sbjct: 1422 DMKLKKISRLDHGMEPQEIINTGLDLVEGLAYDWIAKNLYWLDSKLNTIEVSAENGSNRL 1481
Query: 163 VLCHPN 168
VL N
Sbjct: 1482 VLVREN 1487
>gi|195352538|ref|XP_002042769.1| GM17661 [Drosophila sechellia]
gi|194126800|gb|EDW48843.1| GM17661 [Drosophila sechellia]
Length = 1977
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 172/368 (46%), Gaps = 64/368 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATSRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD---------EEMDCS 272
+CDG +DC DGSDE + C+H+ C ++C L + C+ + +CD +E++C
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMLRCLLGQ-CLDRSLVCDGHNDCGDKSDELNCG 1233
Query: 273 TDDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALS 300
TD N D+F +C G+ +C
Sbjct: 1234 TDSSTVNISCAEDQFQCTSNLKICLPSAVRCNGTTECPRGEDEADCGDVCSIYEFKCRSG 1293
Query: 301 KKCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
++CI + CD + DC +D++ N ++ + +S +++ C P+ C +C
Sbjct: 1294 RECIRREFRCDGQKDCGDGSDELSCELEKGNHNQSQIQPWSTSSLACRPHLFDC-QDGEC 1352
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT 411
V LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G +
Sbjct: 1353 VDLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPSGAVCSCFDGYRLDAD 1412
Query: 412 Q--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
Q C+D DEC C Q C NT Y C C + LR D SC ++ A+++FS
Sbjct: 1413 QKSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFS 1468
Query: 470 STVDIRRI 477
S ++R +
Sbjct: 1469 SFNEVRNL 1476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 154/346 (44%), Gaps = 50/346 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPES 221
C + +C C+ +K CDG+ DC + DE C P F C G C+
Sbjct: 90 CDAGQFQC-RGGGCILQAKMCDGRGDCKDSSDELDCDYRLCQPPHWFPCAQPHGACLAAE 148
Query: 222 WKCDGFVDCLEDGSDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEE 268
C+G +C G DE N + C + C + CIP +++CD
Sbjct: 149 LMCNGIDNC-PGGEDELNCPVRPGFRFGDTAHRMRNCSKYEFTCQQDRTCIPIDFMCDGR 207
Query: 269 MDCS--TDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
DC+ +D++ + + H C NG+ C K+ W+CD DD D
Sbjct: 208 PDCTDKSDEVAGCKQAEVTCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGD 255
Query: 324 NTDEDWDKYFSHNAVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+DE + LC P + C + C+ LS+ CDG DCS+G DE C++K D
Sbjct: 256 GSDE------RGCSNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPD 309
Query: 382 CENLKCS--HKCSPTPR-GAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLS 435
C+ KC+ KC P GA CFCP G K + C D DEC D C Q C NT
Sbjct: 310 CDAKKCALGAKCHMMPAGGAECFCPKGFRLAKFEDKCEDIDECKEQDDLCSQGCENTSGG 369
Query: 436 YVCSCTEGYTLRPDGKSCTA-VNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C GY L D ++C A V+ +++ +++++ + I +HL
Sbjct: 370 YRCVCDAGYLLDKDNRTCRAVVHGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 39/236 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--------CTPGQFSCGMG-KCIP 219
E RC +S +C+ ++ C+G+ DC + DE C+ E C+P QF+C G +CI
Sbjct: 1032 EFRC-NSGECLTMNHRCNGRRDCVDNSDE-MNCDEEHRRKPKVLCSPSQFACHSGEQCID 1089
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCST 273
+ +CD DC D SDE + + F+ +C + + KC+ + +CD DC
Sbjct: 1090 KERRCDNRKDC-HDRSDEQHC---EKFDKNKKCHVHQHGCDNGKCVDSSLVCDGTNDCG- 1144
Query: 274 DDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE + +C G QC S CI +W CD +DCS D +DE DK
Sbjct: 1145 ----DNSDELLCEATSRCEPGMFQCG-SGSCIAGSWECDGRIDCS-----DGSDEH-DKC 1193
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ C P+ LRC QC+ S CDG DC + DE C + N+ C+
Sbjct: 1194 VHRS---CPPDMLRC-LLGQCLDRSLVCDGHNDCGDKSDE-LNCGTDSSTVNISCA 1244
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRNCSKYEFTCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEVTCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
G+C+ + W CDG DC DGSDE N C Q G+ C + C+ + +CD
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDERGCSNLCEPQ--KGKFLCRNRETCLTLSEVCDGHS 292
Query: 270 DCSTDDIVDNTD 281
DCS D D TD
Sbjct: 293 DCS--DGSDETD 302
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q+ +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQERIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
>gi|449514470|ref|XP_002194044.2| PREDICTED: very low-density lipoprotein receptor [Taeniopygia
guttata]
Length = 893
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG S QC+ +S CDG+ DC + EDE N C+P F+C G+CI +S+
Sbjct: 130 CRVNEISCGPQSTQCIPVSWKCDGEKDCDSEEDEQNCGNVTCSPADFTCSSGQCISKSFV 189
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE C + QC S CIP +W+CD++ DCS +D+ ++
Sbjct: 190 CNGQDDC-SDGSDELECAPPTCGVHEFQCKTST-CIPLSWVCDDDADCSDHSDESLEQCG 247
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C +VQC S +CI W CD + DC D +DE + + C
Sbjct: 248 RQPAPSVKCSASEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----INCPSRTCR 296
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ RC N C+ S+ C+G DC +G DE GP C
Sbjct: 297 PDQFRCEDGN-CIHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKFKCRSGECIDINKVC 355
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC+ N CSH C G C CPAG + ++ C D D
Sbjct: 356 NQQRDCKDWSDEPLKECNINECLLNNGGCSHICRDLVIGYECDCPAGFELLDRRTCGDID 415
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 416 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 471
Query: 478 HL 479
L
Sbjct: 472 GL 473
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 91/174 (52%), Gaps = 21/174 (12%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
A+C QF+CG G+CIP+ WKCDG DCL DGSDE C C LS +C+P+
Sbjct: 47 RAKCEESQFACGNGRCIPQIWKCDGDEDCL-DGSDESACVKKTCAESDFVC-LSGQCVPN 104
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH--QCFNGQVQCA-LSKKCIPHNWLCDEEMDCST 318
W CD + DC D +DE + H C ++ C S +CIP +W CD E DC +
Sbjct: 105 RWQCDGDPDCE-----DGSDESSELCHTRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDS 159
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ N V C P + C SS QC++ S C+G+ DCS+G DE
Sbjct: 160 EEDEQNC----------GNVTCSPADFTC-SSGQCISKSFVCNGQDDCSDGSDE 202
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 50 RILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD- 105
RIL+ H+ +A+++ ++N + +S L + L S +L P +D
Sbjct: 526 RILDNIHSPAGIAVDWVYKNIYWSDSTAKTISVASLDGTKRKVLFLS-ELREPASIAVDP 584
Query: 106 -------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
++EKAGM+G +R LVT IQWP+ + +D + LYW DS L+ +
Sbjct: 585 LSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLS 644
Query: 153 SVRVDGSHNAVL 164
SV ++G ++
Sbjct: 645 SVDLNGQDRRIV 656
>gi|291240342|ref|XP_002740078.1| PREDICTED: low density lipoprotein-related protein 2-like
[Saccoglossus kowalevskii]
Length = 4013
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 156/327 (47%), Gaps = 37/327 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGK-CIPES 221
+C P C S +C++L CDG +C++G DE +C T +F C K CI +
Sbjct: 1072 VCAPGYFSCTSVMRCISLVWVCDGISNCADGSDEVNCPVHDCNTSSEFQCTSSKQCISLN 1131
Query: 222 WKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CDG DC ED SDE P + C + + QC S CIP NW CD +DC
Sbjct: 1132 LRCDGAWDC-EDHSDEEDCPTRPPNGCHSDEFQCVGSGTCIPGNWECDGHLDC------- 1183
Query: 279 NTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D++ D+ +C G V C S CIP +W+CD+ DC VD +DE
Sbjct: 1184 --DDNSDEHGEC--GAVTCNPTDFKCDSHVCIPSHWVCDQYNDC-----VDGSDE---LV 1231
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKC 391
C N+ C + QC+ + C+G +C G DE P CN+ + N CSH+C
Sbjct: 1232 CPTQPFSCPDNQWLCPGTTQCIDNNDVCNGVEECPLGHDESPICNDDSCMINNGGCSHQC 1291
Query: 392 SPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP GA C C GQ + C D +EC G+C QTC + S+ C C +GY L PD
Sbjct: 1292 LQTPFGAECVCLLGQQLLNDSKVCADINECEPPGACSQTCIDEKYSFKCECGDGYMLEPD 1351
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRR 476
+C + N P ++ S+ I R
Sbjct: 1352 RHTCKSTN---SAPVYMVVSNVDSIIR 1375
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 120/371 (32%), Positives = 166/371 (44%), Gaps = 59/371 (15%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207
+N+ V V+ S NA C +E C ++ QC+ + CDG DC + DE +C
Sbjct: 3 INSGVVVLVERSSNA--CQHDEFSC-NNGQCIDTTWICDGIEDCLDASDEVGCTAQQCID 59
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCD 266
+F C G+CI W CDG DC ++ +DE +C H C + Q +CA + CIP W CD
Sbjct: 60 DEFRCPSGRCILSEWVCDGDDDCGDN-ADESQSCPEHMCNDSQFKCA-NGNCIPIQWKCD 117
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STD----- 319
E DCS D++DE ++ C + + C C+P + CD DC TD
Sbjct: 118 HENDCS-----DSSDESNCEYRDCESTDITC-FDGTCVPASRRCDGVFDCRDGTDENNCN 171
Query: 320 --------------------------DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
D +D +DE Y S C E C +SN C
Sbjct: 172 SECGILEFECADGSCIPRQLYCNHQSDCLDESDEADCVYPS-----CSSAEFTCENSN-C 225
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKT 411
V CDG DC + DE N +C L C + C +P G +C+C G + +
Sbjct: 226 VPQEWVCDGADDCLDLSDEKRCGEN--NCGILGCENDCHVSPTGGICYCDVGYILDTDNR 283
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
CVD DEC + GSCDQ C N +Y CSC EGY + + C A+ A I FS
Sbjct: 284 TCVDYDECGVWGSCDQLCHNVPSAYRCSCYEGYQIE-NNSHCKAIG---GGAAKIFFSLR 339
Query: 472 VDIRRIHLNGS 482
I + ++GS
Sbjct: 340 NAIMSVDIDGS 350
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 160/369 (43%), Gaps = 65/369 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSC-GMGKCIPES 221
C P +C SS C+ CDG DC + DE FC C G F C G+CIP
Sbjct: 2619 CAPGYHQCESSTLCLPRRWLCDGDNDCGDMSDESTTFCFGIPCNSGDFRCVTSGRCIPPY 2678
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC D SDEP++C + CF Q C S +CIP NW+CD + DC D
Sbjct: 2679 WHCDGDNDC-RDMSDEPSSCGTEEFTCFGDQFTCD-SGRCIPLNWICDSDNDCG-----D 2731
Query: 279 NTDEDWDKFHQCFN-----GQVQCAL----SKKCIPHNWLCDEEMDCS-TDDIVDNTDED 328
++DED + H C G C +CIP WLCD + DC+ +D ED
Sbjct: 2732 HSDED--ERHNCVERNCGPGYFTCTEPIIGRGRCIPLRWLCDGDADCNDAEDEASCDHED 2789
Query: 329 WDKY-FSHNAVLC--------HPN---------------------ELRCGSSNQCVALSK 358
D F+ + +C H N E RC ++ +C+
Sbjct: 2790 CDNSEFTCDNGICIREIYKCDHDNDCGDNSDEPRSCEYRRCNNQTEFRCHNA-RCIPKQW 2848
Query: 359 FCDGKPDCSNGEDEGP-FCNNK-ADCENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVD 415
CDG DC + DE P C + +C +C + +C ++ C +
Sbjct: 2849 VCDGDNDCQDTSDELPSLCEHPPVECPEFQCDNDQCISFDLVCNKHNNCDDESDERHC-N 2907
Query: 416 ADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVD 473
DEC G C Q C NTH SY+C CTEGY D ++C D ++FS+
Sbjct: 2908 VDECTETPGVCSQICENTHGSYICKCTEGYIREGYDNRTCKH---EDDFDPFLVFSNRYY 2964
Query: 474 IRRIHLNGS 482
IR++ ++ S
Sbjct: 2965 IRKLAIDLS 2973
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 147/349 (42%), Gaps = 69/349 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNA-ECTPGQFSCGMGKCIPESW 222
C C S+ +CV CDGK DC + DE P C + EC G+F CG +CIP+ W
Sbjct: 3421 CQAGWFDCHSNYRCVPEWSVCDGKDDCRDNSDESPEECESRECKVGEFRCGNHRCIPQRW 3480
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC D SDE + + C + C + CIP W+CD + DC D++DE
Sbjct: 3481 VCDGDNDC-GDSSDELSCTLRSCSESEFACD-NGACIPSRWICDHDNDCE-----DDSDE 3533
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C G QC LS C+P +++C+ + DC DD D D +Y + C
Sbjct: 3534 QNCHLTTCVPGYFQC-LSGHCVPDSYVCNGDKDCR-DDASDEIDCP-PRY--PDGRYCPA 3588
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--------------CNNK--------- 379
N+ +C S+ CV L CDG DC +G DE CNN
Sbjct: 3589 NKFQC-SNTVCVPLPWRCDGDNDCGDGSDETDMICAEIDCPESSRFRCNNNRCIPRWRLC 3647
Query: 380 ------ADCENLKCSHKCSPTPRG-----------------AMC--FCPAGQNPNKTQCV 414
D + + C P R ++C F G ++ C
Sbjct: 3648 DGVDNCGDASDENTHYMCEPEIRDCTLDEFKCSNKRCVSVFSVCDTFDDCGDQSDEAGCH 3707
Query: 415 DA----DECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGK-SCTAVN 457
+ECL++ G C+ C + ++CSC +GY P K SC VN
Sbjct: 3708 KTGQTLNECLVNNGGCELHCLDIADGFLCSCGDGYQAVPGNKRSCRDVN 3756
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C ++ RC +++ CV+ + CDG DC + DE P FC++ C G ++C G CIPE+W
Sbjct: 3340 CERSQFRC-NNHHCVSENFLCDGDDDCKDNSDEDPDFCDSRTCDVGMYTCDNGFCIPEAW 3398
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC +D ++ + C G C + +C+P +CD + DC DN+DE
Sbjct: 3399 HCDFDNDCGDDSDEKAECRLRPCQAGWFDCHSNYRCVPEWSVCDGKDDCR-----DNSDE 3453
Query: 283 DWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + +C G+ +C + +CIP W+CD + DC D++DE S C
Sbjct: 3454 SPEECESRECKVGEFRCG-NHRCIPQRWVCDGDNDCG-----DSSDE-----LSCTLRSC 3502
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C + C+ CD DC + DE
Sbjct: 3503 SESEFAC-DNGACIPSRWICDHDNDCEDDSDE 3533
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 138/379 (36%), Gaps = 99/379 (26%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
LC C +S +CV CDG+ DC + DE + C+P F+C CI +W+
Sbjct: 955 LCPEYSFTCNNS-RCVYKFWRCDGEDDCHDNSDEENCEDHTCSPMAFTCANNLCIMANWQ 1013
Query: 224 CDGFVDCLE--------------------------------------DGSDEPNTCIHQC 245
CDG DC + DGSDE + H C
Sbjct: 1014 CDGDNDCGDNSDEEDCIPPSCSSSDFTCDNGNCISTQWKCDTDNDCGDGSDEKDCESHVC 1073
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCI 304
G C +CI W+CD +C+ D +DE H C + + QC SK+CI
Sbjct: 1074 APGYFSCTSVMRCISLVWVCDGISNCA-----DGSDEVNCPVHDCNTSSEFQCTSSKQCI 1128
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
N CD DC D++DE+ N CH +E +C S C+ + CDG
Sbjct: 1129 SLNLRCDGAWDCE-----DHSDEEDCPTRPPNG--CHSDEFQCVGSGTCIPGNWECDGHL 1181
Query: 365 DCSNGEDEGPFCNNKA-DCENLKC-SHKCSPT-------------------PRGAMCFCP 403
DC + DE C + + KC SH C P+ P CP
Sbjct: 1182 DCDDNSDEHGECGAVTCNPTDFKCDSHVCIPSHWVCDQYNDCVDGSDELVCPTQPFS-CP 1240
Query: 404 AGQN--PNKTQCVDA----------------------DECLI-DGSCDQTCTNTHLSYVC 438
Q P TQC+D D C+I +G C C T C
Sbjct: 1241 DNQWLCPGTTQCIDNNDVCNGVEECPLGHDESPICNDDSCMINNGGCSHQCLQTPFGAEC 1300
Query: 439 SCTEGYTLRPDGKSCTAVN 457
C G L D K C +N
Sbjct: 1301 VCLLGQQLLNDSKVCADIN 1319
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 107/234 (45%), Gaps = 16/234 (6%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
+L+ CD + ++ S +C+P +C + N C CDG DC + DE
Sbjct: 3276 LLWKCDGQADCRDASDEPTSCPIRVCNPGWFQCDNFN-CTRSVWICDGDNDCGDMSDEEH 3334
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
C QF C C+ E++ CDG DC ++ ++P+ C + + + + CI
Sbjct: 3335 CELRSCERSQFRCNNHHCVSENFLCDGDDDCKDNSDEDPDFCDSRTCDVGMYTCDNGFCI 3394
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
P W CD + DC D++DE + + C G C + +C+P +CD + DC
Sbjct: 3395 PEAWHCDFDNDCG-----DDSDEKAECRLRPCQAGWFDCHSNYRCVPEWSVCDGKDDCR- 3448
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ S C E RCG +++C+ CDG DC + DE
Sbjct: 3449 ----DNSDESPEECESRE---CKVGEFRCG-NHRCIPQRWVCDGDNDCGDSSDE 3494
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 97/229 (42%), Gaps = 20/229 (8%)
Query: 159 SHNAVLCHP------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQF 210
++N +C P + C ++ +C+++ CD DC + DE F E C F
Sbjct: 2484 ANNGRMCVPVDSNCEEDFTCVNTGRCISMRWVCDIDNDCGDSSDEADFMCFEHTCRQTDF 2543
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+C G+CI SW+ + D DGSDE + C + +CI + +CD D
Sbjct: 2544 TCNNGRCIFLSWR-CDYDDDCRDGSDEIDCPFPTCDPINDFTCANSRCISKDDVCDGHDD 2602
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D D C G QC S C+P WLCD + DC D +DE
Sbjct: 2603 CRDGQQSDERDC---PGRTCAPGYHQCESSTLCLPRRWLCDGDNDCG-----DMSDESTT 2654
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
F + C+ + RC +S +C+ CDG DC + DE C +
Sbjct: 2655 FCF---GIPCNSGDFRCVTSGRCIPPYWHCDGDNDCRDMSDEPSSCGTE 2700
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 141 LYW-CDSHLNTVESVRVDGSHNAVL--CHPNELRCG----SSNQCVALSKFCDGKPDCSN 193
L W CDS + + D HN V C P C +C+ L CDG DC++
Sbjct: 2719 LNWICDSDNDCGDHSDEDERHNCVERNCGPGYFTCTEPIIGRGRCIPLRWLCDGDADCND 2778
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
EDE + +C +F+C G CI E +KCD DC D SDEP +C ++ N Q +
Sbjct: 2779 AEDEASCDHEDCDNSEFTCDNGICIREIYKCDHDNDC-GDNSDEPRSCEYRRCNNQTEFR 2837
Query: 254 L-SKKCIPHNWLCDEEMDC 271
+ +CIP W+CD + DC
Sbjct: 2838 CHNARCIPKQWVCDGDNDC 2856
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNA 162
L R+E A M+G+NR+ LV+ I P+ + ID+ N D +YWCD N +E++ DGS+
Sbjct: 3946 LSPRIEAAWMNGQNRTVLVSDQIVEPTGITIDFANGDRIYWCDKKENLIETMNYDGSNRK 4005
Query: 163 VL 164
VL
Sbjct: 4006 VL 4007
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+E++ M G R V+ +I P L IDY+++ LYWCD+ N +E + +DGS+ V+
Sbjct: 2329 IERSTMSGNYREQFVSTDIGSPGGLTIDYDENKLYWCDNERNKIERINIDGSNREVVISH 2388
Query: 168 NELRCGSS 175
+ L G +
Sbjct: 2389 SILSHGMT 2396
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 115/291 (39%), Gaps = 38/291 (13%)
Query: 95 DLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D I+ +D + +E A + G N+ + I P I ++ +YW D + +
Sbjct: 3123 DYTTDRIYWVDAHYDYIEFADLDGSNQHRVTDTGISHP--FAISLFENYIYWTDWNTKAI 3180
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
N V+ R + L + P SN C FS
Sbjct: 3181 YKADKFTGENRVVLQTTIHRPMDLHVYHPLRQREMPNPCGSNNGGCSHLCLISPGGTTFS 3240
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C D FV L+ E C+ C N Q +CA ++KCIP W CD + DC
Sbjct: 3241 CACP---------DDFV--LQSNQRE---CMPNCSNTQYRCADNEKCIPLLWKCDGQADC 3286
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE C G QC + C W+CD + DC D +DE+
Sbjct: 3287 R-----DASDEPTSCPIRVCNPGWFQCD-NFNCTRSVWICDGDNDCG-----DMSDEEHC 3335
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
+ S C ++ RC +++ CV+ + CDG DC + DE P FC+++
Sbjct: 3336 ELRS-----CERSQFRC-NNHHCVSENFLCDGDDDCKDNSDEDPDFCDSRT 3380
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 108 LEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + GM G N+S ++ + + WP+ L IDY D +YW D+H + +E +DGS+
Sbjct: 3095 IGRIGMDGTNQSIVIQGEKVGWPNGLTIDYTTDRIYWVDAHYDYIEFADLDGSN 3148
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
R+E+AGM G +R+ +VT I WP+ L +D + +Y+ D L+ +E DG++
Sbjct: 1440 RIERAGMDGSDRTVIVTDRIYWPNGLTLDLPTERVYFGDRRLDFIEFCDYDGNN 1493
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+++A M G N LV+ + WP+ L +D ++W D L+ V+SV +G + L
Sbjct: 470 IKRAFMDGSNVVILVSDKVIWPNGLTVDIASKRIFWVDGRLDYVQSVTYNGQNRETL 526
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E+ P R+ K M G N +V N+ L ID Q LYW DS L + + VDG+
Sbjct: 1699 EVTPTLTRISKGRMDGTNPQTVVNGNLGQVEYLTIDIKQQQLYWSDSVLKMIGTCNVDGT 1758
>gi|62630220|gb|AAX88965.1| unknown [Homo sapiens]
Length = 3881
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 375 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 432
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 433 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 486
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 487 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 530
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 531 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 590
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 591 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 649
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 650 DGRTCKVT 657
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2048 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2107
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2108 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2160
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2161 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2213
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2214 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 2273
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 2274 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 2333
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 2334 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 2393
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 2394 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 2442
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 2737 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 2796
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 2797 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 2849
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 2850 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 2903
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 2904 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 2937
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 1967 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2025
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2026 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2080
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2081 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2132
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2133 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2175
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 2514 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 2570
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 2571 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 2622
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 2623 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 2682
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 2683 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 2740
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 2741 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 2798
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 2799 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 2847
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 2848 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 2892
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 2945 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3003
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3004 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3056
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3057 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3115
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3116 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3174
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3175 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 3234
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 3235 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 3290
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 3291 RKYNLS 3296
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 263 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 321
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 322 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 375
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 376 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 422
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 423 GDKCIGVTNRCDGVFDCSDNSDEA 446
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 2820 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 2878
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 2879 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 2937
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 2938 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 2991
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 2992 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3039
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3040 ELKCDGSADCLDASDEA 3056
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 251 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 308
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 309 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 361
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 362 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 406
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 1799 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 1855
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 1856 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 1915
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 1916 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 1974
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 1975 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2028
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2029 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2080
Query: 373 GP 374
P
Sbjct: 2081 NP 2082
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 1757 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 1816
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 1817 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 1876
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 1877 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 1919
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 1920 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 1966
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 1967 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 1999
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 3382 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 3441
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 3442 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 3493
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 67 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 118
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 119 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 171
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 172 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 227
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 228 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 274
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 275 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 324
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 737 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 795
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 796 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 855
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 856 HHRRQVIASDLIIRHPYAL 874
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 1336 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 1395
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 1396 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 1455
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 1456 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 1497
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 719 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 776
>gi|303304950|ref|NP_001181916.1| low-density lipoprotein receptor-related protein 2 precursor [Danio
rerio]
gi|302176489|gb|ADK98421.1| low-density lipoprotein receptor-related protein 2 [Danio rerio]
Length = 4673
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 120/364 (32%), Positives = 162/364 (44%), Gaps = 65/364 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C + +C S +C+ CD + DC +G DE C C+ QF+C G CIP ++
Sbjct: 62 CESAQFQCLSDGECIPQHWVCDDEEDCEDGSDERQHCPGRTCSSSQFTCTNGACIPGGYR 121
Query: 224 CDGFVDCLE------------------------------------DGSDEPNTCIHQCFN 247
CD DCL+ DGSDE N C +C +
Sbjct: 122 CDRVPDCLDGADERNCFYPECSELRCANGACFNRSQRCDQVLNCRDGSDEAN-CTQRCSS 180
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
GQ QC+ + +CIP ++CD + DC D +DE + C C S +CI
Sbjct: 181 GQFQCS-NGECIPRGYICDHDDDCG-----DRSDEQNCTYPTCRGTYFTCP-SGRCIHQV 233
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
WLCD E DC DN DE K + C+P E C SS C+ CDG C
Sbjct: 234 WLCDGEDDCE-----DNADE---KGCDNVQQECYPGEWPCPSSGVCIPFDHLCDGTVHCP 285
Query: 368 NGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQ-CVDADECL 420
+GEDE + C +L C H C +P G C CP G N N ++ C+D D+C
Sbjct: 286 DGEDETNITAGRNCSIWRCASLSCEHHCHASPDGGTCACPPGYVINTNDSRSCMDYDDCS 345
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD--IRRIH 478
+ G CDQ C + S+ CSC +GY L + C A P S+IFS+ D I +H
Sbjct: 346 LWGMCDQLCEDRIGSHRCSCRDGYILE-QHRYCRA--NPSSGVPSLIFSNGRDLLIADVH 402
Query: 479 LNGS 482
+GS
Sbjct: 403 GHGS 406
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/309 (34%), Positives = 145/309 (46%), Gaps = 39/309 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C+P + +C ++C+ + CDG DC++G DE C CT +F C +C+ ++
Sbjct: 1141 CYPGQFQC-PDHRCIDPNYVCDGDRDCADGADEQG-CVYNCTAYEFKCANDHQCVNSYYR 1198
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE P C H+ + QC C+P NW CD DC
Sbjct: 1199 CDGVFDC-NDRSDESGCPTRPPGMCHHE---SEFQCQSDGSCVPVNWECDGHPDCE---- 1250
Query: 277 VDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C + C+ W+CD + DC D +DE +
Sbjct: 1251 -DGSDEHHACPPRTCPTTQFRCD-NGNCVYRGWICDGDNDCR-----DGSDE---RDCPT 1300
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCE--NLKCSH 389
C + +C + CV LS+ CD PDC NG DE P CN ++ C N C+H
Sbjct: 1301 PPFRCPSRQWQCPGHSVCVNLSRVCDNTPDCPNGADESPLCNEPLPDQESCSDNNAGCTH 1360
Query: 390 KCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C P GA C CP G N +KT C D DEC G C Q C N S+ C C +GYTL
Sbjct: 1361 GCIQGPFGAQCTCPMGFQLSNDSKT-CEDIDECHPPGVCSQHCFNERGSFRCHCQDGYTL 1419
Query: 447 RPDGKSCTA 455
D ++C A
Sbjct: 1420 EADARTCKA 1428
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 163/408 (39%), Gaps = 104/408 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C P +C S+N C+ S CDG DC + DE P ++C+ +F C G+CIP W
Sbjct: 2840 CQPEHTKCQSTNICIPRSYLCDGDNDCGDNSDESPTHCATSKCSHNEFRCSSGRCIPGHW 2899
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQC--------------------------- 252
CDG DC DGSDEP TC + C + Q +C
Sbjct: 2900 YCDGGTDC-NDGSDEPITCTSLVRTCNSEQFRCDDGRCIASSWICDGDNDCGDMSDEDQR 2958
Query: 253 -------------------ALSKKCIPHNWLCDEEMDCS--------------------- 272
+KCIP +W+CD + DCS
Sbjct: 2959 HNCANRTCSAQEFTCVNNRPPQRKCIPRDWVCDGDADCSDAFDEHQNCTRRSCSTNEFTC 3018
Query: 273 --------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+D D++DE + C Q C + +CI ++LCD + DC
Sbjct: 3019 NNGLCIRSSYRCDRRNDCGDSSDEQGCTYQPCQQHQFTCQ-NGRCISRDFLCDGDNDCG- 3076
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN 377
D +DE D A C RC + N C+ S+ CD DCS+ DE G N
Sbjct: 3077 ----DESDE-LDHLCRMPAPTCPSGHFRCDNGN-CLPQSQVCDRNDDCSDNSDEKGCGIN 3130
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGS-CDQTCTNTH 433
D C H C+ T +C C G + NKT C D DEC + S C Q C NT
Sbjct: 3131 ECTDPSMHHCDHNCTDTLTSFICTCRPGYRLMSDNKT-CDDIDECSVTPSVCSQVCENTL 3189
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SYVC C G+ PDG SC + + +IFS+ +R + +G
Sbjct: 3190 GSYVCKCAPGFLREPDGHSCRQNS---NIHPYLIFSNRYYLRNLSTDG 3234
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 154/368 (41%), Gaps = 60/368 (16%)
Query: 163 VLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C P+ + RC ++QC+ L CDG DC +G DE CT ++ C CIP+
Sbjct: 3734 LTCEPSGDFRC-DNHQCIPLRWRCDGDNDCGDGSDEHNCSPRPCTESEYRCDNLHCIPDR 3792
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC ED SDE + + C G QCA S CI + CD DC +D TD
Sbjct: 3793 WVCDHDNDC-EDNSDERDCELRTCHPGYFQCA-SGHCIAERFKCDGNADC-----LDFTD 3845
Query: 282 ED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------- 316
E + C +C + C+ +W+CD + DC
Sbjct: 3846 ESSCPTRYPNSTYCPPFLFECK-NHVCVQQHWICDGDNDCGDNSDEELHLCLDISCDPPF 3904
Query: 317 -----------------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
S DD D TDE + + C +E +CG+ QC+ L
Sbjct: 3905 RFRCDNNRCIYSHEVCNSIDDCGDGTDERAEHCVTPTHGPCSADEYKCGNG-QCIPLQYA 3963
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCV 414
CD DC + DE G + + C C H C+ G +C C G PN K C
Sbjct: 3964 CDDYDDCEDQSDELGCYFGHGRSCSENLCEHNCTDLSAGGFICSCRPGYKPNPEDKNTCE 4023
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
D DEC I G+C Q C NT SY C C EG+ R G+ + P ++ V I
Sbjct: 4024 DVDECEIYGTCPQLCKNTKGSYECFCAEGF--RSVGEQPGVECAAEGNPPVLLLPDNVRI 4081
Query: 475 RRIHLNGS 482
RR +L+ +
Sbjct: 4082 RRFNLSSA 4089
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 106/219 (48%), Gaps = 33/219 (15%)
Query: 167 PNELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKC 217
P L+CGS++ +CV S CDG DC + DE C A C+P F+C +C
Sbjct: 1013 PPTLQCGSNSFSCSNGKCVPHSYQCDGVDDCHDNSDEA-HCGAHNNTCSPLAFTCANQRC 1071
Query: 218 IPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+P SW CDG DC DGSDE P C Q CA + CIP WLCD + DC
Sbjct: 1072 VPRSWHCDGHNDCF-DGSDERDCPTQTPGTCPADQFICA-NHYCIPRTWLCDTDNDCG-- 1127
Query: 275 DIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE + D C+ GQ QC +CI N++CD + DC+ D DE Y
Sbjct: 1128 ---DGSDENNCDSIGTCYPGQFQCP-DHRCIDPNYVCDGDRDCA-----DGADEQGCVYN 1178
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E +C + +QCV CDG DC++ DE
Sbjct: 1179 ------CTAYEFKCANDHQCVNSYYRCDGVFDCNDRSDE 1211
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 87/264 (32%), Positives = 120/264 (45%), Gaps = 36/264 (13%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
C H TV+ V + +C + RC + +C+ + CDG+ DC +G DE C
Sbjct: 3510 CPDHFLTVQIAGV--ARCLPMCSSTQYRCADNERCIPIWWKCDGQRDCRDGSDEPSTCPV 3567
Query: 204 E-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIP 260
C GQF C G C + C+ DC DGSDE HQC + Q QCA +K+CI
Sbjct: 3568 RHCRLGQFQCNDGNCTSPHFLCNSNQDC-PDGSDEDTVLCATHQCESHQWQCA-NKRCIS 3625
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD E DC D +DED C GQ +C + +CIP+ W CD + DC
Sbjct: 3626 EAWQCDGENDCG-----DGSDEDPAHCSSRTCRPGQFKCR-NGRCIPNTWKCDVDDDCG- 3678
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
DN+DE ++ + E C ++ +CV L C+G DC + DE
Sbjct: 3679 ----DNSDEPIEECMGPAYRCDNHTEFDCRTNYRCVPLWAVCNGHNDCRDNSDE------ 3728
Query: 379 KADCENLKC---------SHKCSP 393
+CE L C +H+C P
Sbjct: 3729 -QNCEELTCEPSGDFRCDNHQCIP 3751
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 126/299 (42%), Gaps = 49/299 (16%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N+S ++T I+WP+ L IDY D LYW D+HLN +E +DG H +
Sbjct: 3363 IGRVGMDGNNKSAIITTKIEWPNGLTIDYTNDKLYWSDAHLNYIEFSDLDGRHRHTVYDG 3422
Query: 163 VLCHPNELRC---------GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
VL HP + ++ +K+ + PF C P +
Sbjct: 3423 VLPHPFAITVFEDTLYWTDWNTRTVEKGNKYNGSGREMLVNTTHRPFDIHVCHPYRQPIV 3482
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNT-----------------CIHQCFNGQVQCALSK 256
C + C CL + T C+ C + Q +CA ++
Sbjct: 3483 TNPCALNNGGCSHL--CLLRAGGQGYTCECPDHFLTVQIAGVARCLPMCSSTQYRCADNE 3540
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+CIP W CD + DC D +DE C GQ QC PH +LC+ D
Sbjct: 3541 RCIPIWWKCDGQRDCR-----DGSDEPSTCPVRHCRLGQFQCNDGNCTSPH-FLCNSNQD 3594
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C D +DED +H C ++ +C ++ +C++ + CDG+ DC +G DE P
Sbjct: 3595 CP-----DGSDEDTVLCATHQ---CESHQWQC-ANKRCISEAWQCDGENDCGDGSDEDP 3644
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 109/258 (42%), Gaps = 72/258 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C ++ +C++ + CDG+ DC +G DE P C++ C PGQF C G+CIP +W
Sbjct: 3611 CESHQWQC-ANKRCISEAWQCDGENDCGDGSDEDPAHCSSRTCRPGQFKCRNGRCIPNTW 3669
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQC------------------AL---------- 254
KCD DC D SDEP I +C +C A+
Sbjct: 3670 KCDVDDDC-GDNSDEP---IEECMGPAYRCDNHTEFDCRTNYRCVPLWAVCNGHNDCRDN 3725
Query: 255 --------------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+ +CIP W CD + DC D +DE C +
Sbjct: 3726 SDEQNCEELTCEPSGDFRCDNHQCIPLRWRCDGDNDCG-----DGSDEHNCSPRPCTESE 3780
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP W+CD + DC DN+DE CHP +C +S C+
Sbjct: 3781 YRCD-NLHCIPDRWVCDHDNDCE-----DNSDER-----DCELRTCHPGYFQC-ASGHCI 3828
Query: 355 ALSKFCDGKPDCSNGEDE 372
A CDG DC + DE
Sbjct: 3829 AERFKCDGNADCLDFTDE 3846
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 132/335 (39%), Gaps = 74/335 (22%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E+ + G NR +V+ I +P ++ + Y+Q I YW D + ++ + DGS V+
Sbjct: 2573 QKIERCSLTGTNREVIVSTAI-YPFAMTV-YDQHI-YWTDWNTRSIYRANKHDGSDQRVM 2629
Query: 165 CH-----PNELRCGS-------SNQCVALSKFC-----------------DGKPDCSNGE 195
P ++ S S+ C + C +G+ ++ +
Sbjct: 2630 LQNLPSRPMDIHVLSNSKQQQCSSPCEQFNGGCSHICTPGPQGAECQCPSEGRWYLADNK 2689
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDG--------------------FVDCLEDGS 235
P C PGQF+C G+CI WKCD FV + +
Sbjct: 2690 HCIPDNGTRCQPGQFTCMNGRCIRSQWKCDNDDDCGDGSDELERVCGSKHHFVFVRQAAA 2749
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQ 294
+ H C C + +C+P+++ CD DC DN+DE F C N +
Sbjct: 2750 FISLSAFHTCEPTVFTCG-NGRCVPYHYRCDHYNDCG-----DNSDETGCIFRPCDPNTE 2803
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C + +CI ++C+ +C + D + C P +C S+N C+
Sbjct: 2804 FSCN-NGRCIAREYICNGINNCYDNGTSDEQN--------CPERTCQPEHTKCQSTNICI 2854
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
S CDG DC + DE P C KCSH
Sbjct: 2855 PRSYLCDGDNDCGDNSDESP-----THCATSKCSH 2884
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
R+E A M G+ R L+ +++ WP+ L +DY N++ +YWCDS N +ES++VDGS ++
Sbjct: 4226 RIETAWMDGQQREVLLDEDLGWPTGLALDYLNENRIYWCDSKENIIESMKVDGSDRQIII 4285
Query: 166 -----HPNEL 170
HP L
Sbjct: 4286 SGDIGHPYSL 4295
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
W Y IL L+ +HR + +NV++ R + D N+ L +
Sbjct: 1523 WTDY---ILETIEVSKLDGSHRT----VLISENVTNPR---GLVVDPRNNTHLMFWTDWG 1572
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG----- 158
+ R+E+A M G+ R+ +++ + WP+ L IDY +LY+ D++L+ ++ DG
Sbjct: 1573 RNPRIERASMDGKLRTTIISNKLYWPNGLTIDYPNSLLYFADAYLDFIDYCDYDGKNRKQ 1632
Query: 159 --SHNAVLCHPNEL 170
+ + VL HP+ +
Sbjct: 1633 VLASDLVLQHPHAI 1646
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C +G +C + +CIP + CD DCS DN+DE C + Q QC +CI
Sbjct: 23 CESGFFRCG-TGRCIPVSQRCDGTNDCS-----DNSDEIGCPQPTCESAQFQCLSDGECI 76
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGK 363
P +W+CD+E DC D +DE H C ++ C ++ C+ CD
Sbjct: 77 PQHWVCDDEEDCE-----DGSDER-----QHCPGRTCSSSQFTC-TNGACIPGGYRCDRV 125
Query: 364 PDCSNGEDE 372
PDC +G DE
Sbjct: 126 PDCLDGADE 134
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
LE+A M G NR ++ + WP+ + +D +YW DS + +E+ DG H + H
Sbjct: 530 LERAYMDGTNRYGIIRTKLGWPAGITLDLEAKRVYWVDSRYDYIETTTYDGLHRKTVVH 588
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEI-------- 101
NG +A+++ N F+ + + +RL LL + D+P +
Sbjct: 2145 NGIRGIAVDWAAGNLYFTNAFLTETYIEVIRLNTTFRRVLLKTQVDMPRHIVVDPKNRYL 2204
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E+A + G NR+ LV+ I P L +D+ +YW D L+ + VR +
Sbjct: 2205 FWADYGQTPKIERAFLDGSNRTALVSSGIVTPRGLALDHRDGYIYWVDDSLDMIARVRPE 2264
Query: 158 GSHNAVL 164
G V+
Sbjct: 2265 GGETEVV 2271
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 56/127 (44%), Gaps = 17/127 (13%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L +A ++ +R Q +SS+ + +Q + +P P LD
Sbjct: 2465 LGAPDGIAYDWINRRIYYSDYINQTISSMAVDGSQRTVVAQ---VPRPRAIMLDPCRGYM 2521
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++E+A + G R+ +V ++ WP+ L +DY+ LYW D+ L +E +
Sbjct: 2522 YWTDWGTSAKIERATLGGNFRTEIVNTSLVWPNGLTLDYDDQRLYWADASLQKIERCSLT 2581
Query: 158 GSHNAVL 164
G++ V+
Sbjct: 2582 GTNREVI 2588
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 6/121 (4%)
Query: 53 NGTHTLALEFNHRNQSLC--FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD---ER 107
+G+ L RNQ + + Q N +R + N + +D I+ D +R
Sbjct: 1429 SGSREALLLVASRNQIISDDILAQPNAIRSLVRDGR-NIVAVDFDSVTERIYWSDTTQDR 1487
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ A +G +R+ + + SL +D+ LYW D L T+E ++DGSH VL
Sbjct: 1488 IWSAHKNGTDRTVIFDSGVTVTESLAVDWVGRNLYWTDYILETIEVSKLDGSHRTVLISE 1547
Query: 168 N 168
N
Sbjct: 1548 N 1548
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 12/66 (18%)
Query: 423 GSCDQTCTNTH------LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
G C+ C +H L Y C C GY L DGK C AV ++FSS + +R
Sbjct: 660 GGCEHICVLSHRTDNGGLGYRCRCRMGYDLHADGKRCVAVR------QFLLFSSQLAVRG 713
Query: 477 IHLNGS 482
I N S
Sbjct: 714 IPFNLS 719
>gi|426337619|ref|XP_004032798.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Gorilla gorilla gorilla]
Length = 3709
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 143/300 (47%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 203 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE-VGCVLNCTASQFKCASGDKCIGVTNR 260
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 261 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC----LYGSD 315
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C + C + CI WLCD + DC D +DE K C
Sbjct: 316 EHNACVPKTCPSSYFHCD-NGNCIHRAWLCDRDNDCG-----DMSDE---KDCPTQPFRC 366
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAM 399
+ +C N CV LS CDG DC NG DE P CN N N C+H+C P GA
Sbjct: 367 PSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHECVQEPFGAK 426
Query: 400 CFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L DG++C
Sbjct: 427 CLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLESDGRTCKVT 485
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 1876 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 1935
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 1936 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 1988
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 1989 SDE--DERHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2041
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2042 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 2101
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 2102 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDSGRCIEMMKLCNHLDDCLDNSDEK 2161
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 2162 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 2221
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 2222 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 2270
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 2565 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 2624
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 2625 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 2677
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 2678 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 2731
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 2732 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 2765
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 109/228 (47%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 1795 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 1853
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 1854 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 1908
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC S +CIP +W CD+E DC D +DE H+ C
Sbjct: 1909 NPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 1960
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 1961 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DERHQCQNQNCS 2003
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 154/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 2342 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 2398
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 2399 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 2450
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 2451 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 2510
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 2511 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 2568
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC C LC
Sbjct: 2569 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGNCTSPQTLC 2626
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 2627 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 2675
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 2676 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 2720
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 2773 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 2831
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 2832 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 2884
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 2885 DCPTRFPDGAYCQATTFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 2943
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 2944 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3002
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3003 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 3062
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 3063 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 3118
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 3119 RKYNLS 3124
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 91 RCVPNYYRCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 149
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 150 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 203
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 204 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 250
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 251 GDKCIGVTNRCDGVFDCSDNSDEA 274
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 2648 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 2706
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 2707 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 2765
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 2766 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 2819
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 2820 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 2867
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 2868 ELKCDGSADCLDASDEA 2884
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C +CIP
Sbjct: 79 QCGLFSFPCKNGRCVPNYYRCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 136
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 137 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 189
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 190 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 234
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 1627 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 1683
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 1684 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 1743
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 1744 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 1802
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 1803 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 1856
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 1857 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 1908
Query: 373 GP 374
P
Sbjct: 1909 NP 1910
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 1585 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 1644
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 1645 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 1704
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 1705 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 1747
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 1748 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 1794
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 1795 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 1827
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 3210 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 3269
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 3270 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 3321
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 565 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 623
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 624 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 683
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 684 HHRRQVIASDLIIRHPYAL 702
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 1164 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 1223
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 1224 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 1283
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 1284 SEGIVTPRGLAVDRSDSYVYWVDDSLDIIARIRINGENSEVI 1325
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 547 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 604
>gi|49942|emb|CAA47817.1| AM2 receptor [Mus musculus]
Length = 4545
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHSDEFQCPLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C +++ C+ K CDGK DC +G DEG C ++ N CSH CS P G +C
Sbjct: 1150 SHPCANNTSVCLPPDKLCDGKDDCGDGSDEGELC-DQCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G + C C C Q C S CSC EG+ L PDG++C +++
Sbjct: 1209 CPLGMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGETCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---LFIIFSNRHEIRRIDLH 1286
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 102/201 (50%), Gaps = 8/201 (3%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C +A+C + C H C PTP G C+C
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCN 137
Query: 404 AG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
+ + C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D
Sbjct: 138 SSFQLEADGKTCKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVD 197
Query: 462 EPASIIFSSTVDIRRIHLNGS 482
P ++ +++ +I +L+G+
Sbjct: 198 RPPVLLIANSQNILATYLSGA 218
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2727 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2785
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C ++ CIP +++CD + D
Sbjct: 2786 HVCVPERWLCDGDKDCT-DGADESVTAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 2843
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D++DE
Sbjct: 2844 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DHSDE-- 2891
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2892 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2947
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2948 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADLDECSTTFPCSQLCINTHGSYKCL 3007
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3008 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3048
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 148/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +F C G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFFCANGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3596 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWPCDADADC-----MDGSDEE- 3646
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3647 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3694
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3695 ICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQR 3754
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3755 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRSGF 3814
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q ++CSC + T + +G + +
Sbjct: 3815 HTVPGQPGCQDINECLRFGTCSQLWNKPKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3874
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3875 DDNEIRSLF 3883
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3344 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3402
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3403 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3457
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + C VD +DE + + C +E RC S +C
Sbjct: 3458 QFQCSITKRCIPRVWVCDRDNHC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3508
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3509 IPARWKCDGEDDCGDGSDE 3527
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 146/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAV--------------LCHPNELRCGSS------NQCVALSKFCDG 187
+V + V G+ V + +E + G++ C +L G
Sbjct: 765 SVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAHEQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PGQF+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGQFACANNRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G C +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2575 NNGRCVSNMLWCNGVDYCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2633
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2634 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2691
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2692 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCENGE-----DE------THCNKFCSEAQ 2739
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2740 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2774
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 132/319 (41%), Gaps = 74/319 (23%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCSN-------------- 193
H LCH E R GS + L + G P
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 194 --------GEDEGPFCNAEC------TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
G ++ N C TPG C + + DG V CL + S P
Sbjct: 796 YDAHEQQVGTNKCRVNNGGCSSLCLATPGSRQCACAE--DQVLDTDG-VTCLANPSYVPP 852
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC 297
QC GQ CA + +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 P---QCQPGQFACA-NNRCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKC 903
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 E-NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPIS 953
Query: 358 KFCDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 954 WTCDLDDDCGDRSDESASC 972
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4026 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4082
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3171 IGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVV 3227
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2033 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2087
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2355 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2414
Query: 164 L 164
+
Sbjct: 2415 I 2415
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
D D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ----GVDYCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2642
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2643 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2686
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHC 109
>gi|343409582|gb|AEM23935.1| very low density lipoprotein receptor transcript variant 2 [Anas
platyrhynchos]
Length = 851
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI +S+
Sbjct: 118 CQVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSAAEFTCSSGQCISKSFV 177
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE C + QC S CIP +W+CD++ DCS +D+ ++
Sbjct: 178 CNGQDDC-SDGSDELECAPPTCGVHEFQCK-SSTCIPISWVCDDDADCSDHSDESLEQCG 235
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C +VQC S +CI W CD + DC D +DE + + C
Sbjct: 236 RQPAPPVKCSASEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----INCPSRTCR 284
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ RC N CV S+ C+G DC +G DE GP C
Sbjct: 285 PDQFRCEDGN-CVHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKFKCRSGECIDINKVC 343
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC+ N CSH C G C CPAG + +K C D D
Sbjct: 344 NQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDFIIGYECDCPAGFELVDKRTCGDID 403
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP +IF++ DIR+I
Sbjct: 404 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEPC-LIFTNRRDIRKI 459
Query: 478 HL 479
L
Sbjct: 460 GL 461
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 115/247 (46%), Gaps = 48/247 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ C S+ +C+ L CDG DCS+G DE C F C G+C+P W+C
Sbjct: 38 CEESQFPC-SNGRCIPLLWKCDGDEDCSDGSDESACVKKTCAESDFVCNSGQCVPNRWQC 96
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
+G DC E+GSDE + C + C ++ C S +CIP +W CD E DC +
Sbjct: 97 EGDPDC-ENGSDEIADLCYMRTCQVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCG 155
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 156 NVTCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVHEFQCK-SSTCIPIS 214
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D++DE ++ A V C +E++CG S +C+ CDG PD
Sbjct: 215 WVCDDDADCS-----DHSDESLEQCGRQPAPPVKCSASEVQCG-SGECIHKKWRCDGDPD 268
Query: 366 CSNGEDE 372
C +G DE
Sbjct: 269 CKDGSDE 275
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
A+C QF C G+CIP WKCDG DC DGSDE C C S +C+P+
Sbjct: 35 RAKCEESQFPCSNGRCIPLLWKCDGDEDC-SDGSDESACVKKTCAESDFVCN-SGQCVPN 92
Query: 262 NWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCST 318
W C+ + DC +D+I D C ++ C S +CIP +W CD E DC +
Sbjct: 93 RWQCEGDPDCENGSDEIADLC-----YMRTCQVNEISCGPQSTQCIPVSWKCDGEKDCDS 147
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C E C SS QC++ S C+G+ DCS+G DE
Sbjct: 148 GEDEENCGN----------VTCSAAEFTC-SSGQCISKSFVCNGQDDCSDGSDE 190
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C +E++CGS +C+ CDG PDC +G DE + C P QF C G C+ S
Sbjct: 242 VKCSASEVQCGS-GECIHKKWRCDGDPDCKDGSDEINCPSRTCRPDQFRCEDGNCVHGSR 300
Query: 223 KCDGFVDCLEDGSDEPN-TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
+C+G DCL DG+DE N + QC G+ +C S +CI N +C+++ DC
Sbjct: 301 QCNGVRDCL-DGTDEANCNNVIQCSGPGKFKCR-SGECIDINKVCNQQRDC 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 50 RILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD- 105
RIL+ H+ +A+++ ++N + +S L + L S +L P +D
Sbjct: 514 RILDNIHSPAGIAVDWVYKNIYWTDSAAKTISVASLDGRKRKVLFLS-ELREPASIAVDP 572
Query: 106 -------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
++EKAGM+G +R LVT IQWP+ + +D + LYW DS L+ +
Sbjct: 573 LSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLS 632
Query: 153 SVRVDGSHNAVL 164
S+ ++G ++
Sbjct: 633 SIDLNGQDRRLV 644
>gi|343409580|gb|AEM23934.1| very low density lipoprotein receptor transcript variant 1 [Anas
platyrhynchos]
Length = 881
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI +S+
Sbjct: 118 CQVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSAAEFTCSSGQCISKSFV 177
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE C + QC S CIP +W+CD++ DCS +D+ ++
Sbjct: 178 CNGQDDC-SDGSDELECAPPTCGVHEFQCK-SSTCIPISWVCDDDADCSDHSDESLEQCG 235
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C +VQC S +CI W CD + DC D +DE + + C
Sbjct: 236 RQPAPPVKCSASEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----INCPSRTCR 284
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ RC N CV S+ C+G DC +G DE GP C
Sbjct: 285 PDQFRCEDGN-CVHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKFKCRSGECIDINKVC 343
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC+ N CSH C G C CPAG + +K C D D
Sbjct: 344 NQQRDCKDWSDEPLKECNINECLVNNGGCSHICRDFIIGYECDCPAGFELVDKRTCGDID 403
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP +IF++ DIR+I
Sbjct: 404 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEPC-LIFTNRRDIRKI 459
Query: 478 HL 479
L
Sbjct: 460 GL 461
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 115/247 (46%), Gaps = 48/247 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ C S+ +C+ L CDG DCS+G DE C F C G+C+P W+C
Sbjct: 38 CEESQFPC-SNGRCIPLLWKCDGDEDCSDGSDESACVKKTCAESDFVCNSGQCVPNRWQC 96
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
+G DC E+GSDE + C + C ++ C S +CIP +W CD E DC +
Sbjct: 97 EGDPDC-ENGSDEIADLCYMRTCQVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCG 155
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 156 NVTCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVHEFQCK-SSTCIPIS 214
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D++DE ++ A V C +E++CG S +C+ CDG PD
Sbjct: 215 WVCDDDADCS-----DHSDESLEQCGRQPAPPVKCSASEVQCG-SGECIHKKWRCDGDPD 268
Query: 366 CSNGEDE 372
C +G DE
Sbjct: 269 CKDGSDE 275
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 84/174 (48%), Gaps = 21/174 (12%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
A+C QF C G+CIP WKCDG DC DGSDE C C S +C+P+
Sbjct: 35 RAKCEESQFPCSNGRCIPLLWKCDGDEDC-SDGSDESACVKKTCAESDFVCN-SGQCVPN 92
Query: 262 NWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCST 318
W C+ + DC +D+I D C ++ C S +CIP +W CD E DC +
Sbjct: 93 RWQCEGDPDCENGSDEIADLC-----YMRTCQVNEISCGPQSTQCIPVSWKCDGEKDCDS 147
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C E C SS QC++ S C+G+ DCS+G DE
Sbjct: 148 GEDEENCGN----------VTCSAAEFTC-SSGQCISKSFVCNGQDDCSDGSDE 190
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 64/111 (57%), Gaps = 5/111 (4%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C +E++CGS +C+ CDG PDC +G DE + C P QF C G C+ S
Sbjct: 242 VKCSASEVQCGS-GECIHKKWRCDGDPDCKDGSDEINCPSRTCRPDQFRCEDGNCVHGSR 300
Query: 223 KCDGFVDCLEDGSDEPN-TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
+C+G DCL DG+DE N + QC G+ +C S +CI N +C+++ DC
Sbjct: 301 QCNGVRDCL-DGTDEANCNNVIQCSGPGKFKCR-SGECIDINKVCNQQRDC 349
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 50 RILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD- 105
RIL+ H+ +A+++ ++N + +S L + L S +L P +D
Sbjct: 514 RILDNIHSPAGIAVDWVYKNIYWTDSAAKTISVASLDGRKRKVLFLS-ELREPASIAVDP 572
Query: 106 -------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
++EKAGM+G +R LVT IQWP+ + +D + LYW DS L+ +
Sbjct: 573 LSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLS 632
Query: 153 SVRVDGSHNAVL 164
S+ ++G ++
Sbjct: 633 SIDLNGQDRRLV 644
>gi|149022164|gb|EDL79058.1| rCG26871, isoform CRA_c [Rattus norvegicus]
Length = 4369
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 163/332 (49%), Gaps = 38/332 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++ C S+ QC+ CD DC +G DE P C+ Q +C G C
Sbjct: 105 GTTCSAQQMTC-SNGQCIPSEYRCDHVSDCPDGSDERNCHYPTCD------QLTCANGAC 157
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S +CD VDC D SDE N C C + +C S +CI ++CD + DC
Sbjct: 158 YNTSQRCDQKVDC-RDSSDEAN-CTTLCSQKEFECG-SGECILRAYVCDHDNDCE----- 209
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
DN+DE + C Q C+ + +CI NW+CD + DC D+ DED + SH+
Sbjct: 210 DNSDERNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQSHH 263
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCS 392
C+P E C S +C+++ K CDG PDC G+DE + + C L C ++C
Sbjct: 264 R--CYPREWACPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCH 321
Query: 393 PTPRGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G CFCP G N N ++ C+D D+C I G CDQ C N + C C EGY L
Sbjct: 322 QTPFGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILE-R 380
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C + + AS+IFS+ D+ L+G
Sbjct: 381 GQHCKSSD--SFSAASVIFSNGRDLLVGDLHG 410
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC++G DE C CT QF C G CI ++
Sbjct: 1150 CQPTQFRC-PDHRCISPLYVCDGDKDCADGSDEAG-CVLNCTSAQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-RDNSDEAGCPTRPPGMCHLDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI W+CD + DC D+ D D + C
Sbjct: 1262 DEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CLCPLGYQLANDTKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTG 1433
Query: 458 VPQDEPASIIFS 469
+ P ++ S
Sbjct: 1434 --SENPLLVVAS 1443
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 165/410 (40%), Gaps = 105/410 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCLSPQRCIPSY 2882
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC DGSDEP+TC H C Q QC + +CI NW+CD + DC D+ D
Sbjct: 2883 WFCDGEADC-ADGSDEPDTCGHSVNTCRASQFQCD-NGRCISGNWVCDGDNDCG--DMSD 2938
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS----------------- 317
+ C + Q C S ++CIP W+CD + DCS
Sbjct: 2939 EDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRTCSAG 2998
Query: 318 ------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+D D +DE Y CH N+ C + +C+
Sbjct: 2999 EFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPP-----CHANQFTC-QNGRCIPRFFV 3052
Query: 360 CDGKPDCSNGEDE---------------------------GPFCNNKADCEN-------- 384
CD DC +G DE G CN+ DC +
Sbjct: 3053 CDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEKGCG 3112
Query: 385 ---------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNT 432
+C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 INECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCENV 3172
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 3173 VGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 3219
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 3710 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 3768
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 3769 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 3821
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 3822 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 3878
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 3879 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 3936
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 3937 GFICSCRPGFKPSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 3996
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 3997 RCAA----DGSPPLLLLPENVRIRK 4017
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3462 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 3521
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP +W CD DC +DN+
Sbjct: 3522 LCNARQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNS 3574
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 3575 DEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTTAAYN 3628
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3629 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3662
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3545 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 3603
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 3604 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3662
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 3663 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 3721
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 3722 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 3770
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 3771 RADCLDASDE 3780
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ CD DC +G DE P A C F+CG G+C+P ++CD + DC D
Sbjct: 2712 HCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRCVPYHYRCDYYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE H C
Sbjct: 2771 SDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPHTCPPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S +C+
Sbjct: 2828 TKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCLSPQRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKAD 381
FCDG+ DC++G DE C + +
Sbjct: 2880 PSYWFCDGEADCADGSDEPDTCGHSVN 2906
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSSQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCESGLFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +W+CDE+ DCS D DE + + Q + +CIP + CD DC
Sbjct: 81 IPSSWVCDEDKDCS-----DGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCP- 134
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 ----DGSDERNCHYPTCDQLTC--------ANGACYNTSQRCDQKVDCRDSSDEA 177
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 139/389 (35%), Gaps = 113/389 (29%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GK 216
P +CGS + +CV CDG DC + DE G F N C+P F+C G+
Sbjct: 1020 PPTQQCGSLSFPCNNGKCVPSFFRCDGVDDCHDNSDEHQCGVF-NNTCSPSAFACVRGGQ 1078
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CIP W CD DCL DGSDE N H C + C + CIP +W+CD + DCS
Sbjct: 1079 CIPGQWHCDRQNDCL-DGSDEQNCPTHATSSTCPSTSFTCD-NHVCIPKDWVCDTDNDCS 1136
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
D D +DE + C + Q +C
Sbjct: 1137 DGSDEKNCQASGTCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAGCVLN-CTSAQFKC 1195
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
A CI + CD DC DN+DE + +CH +E +C C+ +
Sbjct: 1196 ADGSSCINSRYRCDGVYDCR-----DNSDE--AGCPTRPPGMCHLDEFQCQGDGTCIPNT 1248
Query: 358 KFCDGKPDCSNGEDEGP------------------------FCNNKADCENLKCSHKCSP 393
CDG PDC +G DE C+ DC ++ C
Sbjct: 1249 WECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCRDMSDEKDCPT 1308
Query: 394 TPRGAMCFCPAGQN--PNKTQCV----------------------DADECL-IDGSCDQT 428
P CP+ Q P + C+ + D C +G C
Sbjct: 1309 QPF----HCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQ 1364
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C C GY L D K+C +N
Sbjct: 1365 CMQGPFGATCLCPLGYQLANDTKTCEDIN 1393
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGTNREVVVSTAFH---SFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C C QF+C G CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 G-NGRCVPYHYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPHTCPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPF 375
P
Sbjct: 2856 NPI 2858
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 159/424 (37%), Gaps = 126/424 (29%)
Query: 48 FKRILNGT-HTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLN---------SWD 95
+ IL G + +AL+F+ + L +I ++Q + + L ++N + D
Sbjct: 3221 YSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNRETIINHRLRRAESLAVD 3280
Query: 96 LPAPEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL---------- 141
+ ++ D + + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 3281 WVSRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 142 -------------------------------YWCDSHLNTVESV-RVDGSHNAVLCH--- 166
+W D + TVE + DGS VL +
Sbjct: 3341 EFSDLEGHHRHTVYDGSLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH 3400
Query: 167 -PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
P ++ + +S C G + G C+ C G P+ ++
Sbjct: 3401 KPFDIHVYHPYRQPIMSNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTV 3451
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS------------- 272
D C+ C + Q C ++KCIP W CD + DCS
Sbjct: 3452 QLRD--------RTLCMPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRF 3503
Query: 273 ----------------------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
D D +DED + H+C + + QCA +K+CIP +W
Sbjct: 3504 CRLGQFQCRDGNCTSPQALCNARQDCADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSW 3562
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
CD DC +DN+DED S C P + +C ++ +C+ S CD DC +
Sbjct: 3563 QCDSVNDC-----LDNSDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGD 3613
Query: 369 GEDE 372
DE
Sbjct: 3614 YSDE 3617
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH +E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 1230 MCHLDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAW 1289
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC + D D P H C + Q QC CI + LCD DC
Sbjct: 1290 ICDGDNDCRDMSDEKDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDC 1339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4160 KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 4218
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 135/370 (36%), Gaps = 52/370 (14%)
Query: 13 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI 72
K+ I N L E ++C T D + D K + L L R Q + +
Sbjct: 771 GTGKEVITANRL--ESVECLTFDWISRNLYWTDGGLKSVT----VLRLADKSRRQIISNL 824
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N S+ + L+ W PA ++ +A G + P+V ++ WP+ L
Sbjct: 825 N--NPRSIVVHPTAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGL 874
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
ID++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 875 AIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FI 927
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD-------EPNTCIHQC 245
G + G + + I + L+ GS+ C H C
Sbjct: 928 TDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQTTHANGDCSHFC 987
Query: 246 F---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
F N Q C C L ++M C D + + QC + C + K
Sbjct: 988 FPVPNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSLSFPCN-NGK 1036
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P + CD DD DN+DE F++ C P+ C QC+ CD
Sbjct: 1037 CVPSFFRCD-----GVDDCHDNSDEHQCGVFNNT---CSPSAFACVRGGQCIPGQWHCDR 1088
Query: 363 KPDCSNGEDE 372
+ DC +G DE
Sbjct: 1089 QNDCLDGSDE 1098
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D D+LYW D+ L +E + G++ V+
Sbjct: 2530 NAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQKIERSTLTGTNREVV 2589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL S D+P I
Sbjct: 2146 NGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|45382563|ref|NP_990560.1| very low-density lipoprotein receptor precursor [Gallus gallus]
gi|1730110|sp|P98165.1|VLDLR_CHICK RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; AltName: Full=Vitellogenin
receptor; Short=VTG receptor; Flags: Precursor
gi|609266|emb|CAA56505.1| chicken very low density lipoprotein (VLDL)/vitellogenin receptor
[Gallus gallus]
Length = 863
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 174/376 (46%), Gaps = 71/376 (18%)
Query: 157 DGS-HNAVLCH-----PNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +A LCH NE+ CG S QC+ +S CDG+ DC +GEDE N C+ +
Sbjct: 117 DGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSAAE 176
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C G+CI +S+ C+G DC DGSDE C + QC S CIP +W+CD++
Sbjct: 177 FTCSSGQCISKSFVCNGQDDC-SDGSDELECAPPTCGVHEFQCK-SSTCIPISWVCDDDA 234
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DCS +D+ ++ +C +VQC S +CI W CD + DC D +DE
Sbjct: 235 DCSDHSDESLEQCGRQPAPPVKCSTSEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE 288
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ + C P++ RC N C+ S+ C+G DC +G DE GP
Sbjct: 289 -----INCPSRTCRPDQFRCEDGN-CIHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKF 342
Query: 375 ------------FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPA 404
CN+ DC+ N CSH C G C CPA
Sbjct: 343 KCRSGECIDINKVCNHHGDCKDWSDEPLKECNINECLVNNGGCSHICRDLVIGYECDCPA 402
Query: 405 G-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G + ++ C D DEC G C Q C N Y C C+ GY + C AV EP
Sbjct: 403 GFELVDRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP 459
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIR+I L
Sbjct: 460 C-LIFTNRRDIRKIGL 474
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 48/247 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C S+ +C+ L CDG DCS+G DE C F C G+C+P W+C
Sbjct: 51 CEESQFQC-SNGRCIPLLWKCDGDEDCSDGSDESACVKKTCAESDFVCNSGQCVPNRWQC 109
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE H C ++ C S +CIP +W CD E DC +
Sbjct: 110 DGDPDC-EDGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCG 168
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 169 NVTCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVHEFQCK-SSTCIPIS 227
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D++DE ++ A V C +E++CG S +C+ CDG PD
Sbjct: 228 WVCDDDADCS-----DHSDESLEQCGRQPAPPVKCSTSEVQCG-SGECIHKKWRCDGDPD 281
Query: 366 CSNGEDE 372
C +G DE
Sbjct: 282 CKDGSDE 288
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C QF C G+CIP WKCDG DC DGSDE C C S +C+P+
Sbjct: 49 AKCEESQFQCSNGRCIPLLWKCDGDEDC-SDGSDESACVKKTCAESDFVCN-SGQCVPNR 106
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE + H C ++ C S +CIP +W CD E DC +
Sbjct: 107 WQCDGDPDCE-----DGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSG 161
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C E C SS QC++ S C+G+ DCS+G DE
Sbjct: 162 EDEENC----------GNVTCSAAEFTC-SSGQCISKSFVCNGQDDCSDGSDE 203
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 50 RILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD- 105
RIL+ H+ +A+++ ++N + +S L + L S +L P +D
Sbjct: 527 RILDNIHSPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLS-ELREPASIAVDP 585
Query: 106 -------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
++EKAGM+G +R LVT IQWP+ + +D + LYW DS L+ +
Sbjct: 586 LSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLS 645
Query: 153 SVRVDGSHNAVL 164
SV ++G ++
Sbjct: 646 SVDLNGQDRRLV 657
>gi|149022163|gb|EDL79057.1| rCG26871, isoform CRA_b [Rattus norvegicus]
Length = 4609
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 163/332 (49%), Gaps = 38/332 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++ C S+ QC+ CD DC +G DE P C+ Q +C G C
Sbjct: 105 GTTCSAQQMTC-SNGQCIPSEYRCDHVSDCPDGSDERNCHYPTCD------QLTCANGAC 157
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S +CD VDC D SDE N C C + +C S +CI ++CD + DC
Sbjct: 158 YNTSQRCDQKVDC-RDSSDEAN-CTTLCSQKEFECG-SGECILRAYVCDHDNDCE----- 209
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
DN+DE + C Q C+ + +CI NW+CD + DC D+ DED + SH+
Sbjct: 210 DNSDERNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQSHH 263
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCS 392
C+P E C S +C+++ K CDG PDC G+DE + + C L C ++C
Sbjct: 264 R--CYPREWACPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCH 321
Query: 393 PTPRGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G CFCP G N N ++ C+D D+C I G CDQ C N + C C EGY L
Sbjct: 322 QTPFGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILE-R 380
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C + + AS+IFS+ D+ L+G
Sbjct: 381 GQHCKSSD--SFSAASVIFSNGRDLLVGDLHG 410
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC++G DE C CT QF C G CI ++
Sbjct: 1150 CQPTQFRC-PDHRCISPLYVCDGDKDCADGSDEAG-CVLNCTSAQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-RDNSDEAGCPTRPPGMCHLDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI W+CD + DC D+ D D + C
Sbjct: 1262 DEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CLCPLGYQLANDTKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTG 1433
Query: 458 VPQDEPASIIFS 469
+ P ++ S
Sbjct: 1434 --SENPLLVVAS 1443
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 165/410 (40%), Gaps = 105/410 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCLSPQRCIPSY 2882
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC DGSDEP+TC H C Q QC + +CI NW+CD + DC D+ D
Sbjct: 2883 WFCDGEADC-ADGSDEPDTCGHSVNTCRASQFQCD-NGRCISGNWVCDGDNDCG--DMSD 2938
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS----------------- 317
+ C + Q C S ++CIP W+CD + DCS
Sbjct: 2939 EDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRTCSAG 2998
Query: 318 ------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+D D +DE Y CH N+ C + +C+
Sbjct: 2999 EFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPP-----CHANQFTC-QNGRCIPRFFV 3052
Query: 360 CDGKPDCSNGEDE---------------------------GPFCNNKADCEN-------- 384
CD DC +G DE G CN+ DC +
Sbjct: 3053 CDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEKGCG 3112
Query: 385 ---------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNT 432
+C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 INECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCENV 3172
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 3173 VGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 3219
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 3710 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 3768
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 3769 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 3821
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 3822 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 3878
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 3879 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 3936
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 3937 GFICSCRPGFKPSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 3996
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 3997 RCAA----DGSPPLLLLPENVRIRK 4017
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3462 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 3521
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP +W CD DC +DN+
Sbjct: 3522 LCNARQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNS 3574
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 3575 DEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTTAAYN 3628
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3629 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3662
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3545 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 3603
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 3604 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3662
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 3663 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 3721
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 3722 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 3770
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 3771 RADCLDASDE 3780
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ CD DC +G DE P A C F+CG G+C+P ++CD + DC D
Sbjct: 2712 HCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRCVPYHYRCDYYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE H C
Sbjct: 2771 SDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPHTCPPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S +C+
Sbjct: 2828 TKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCLSPQRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKAD 381
FCDG+ DC++G DE C + +
Sbjct: 2880 PSYWFCDGEADCADGSDEPDTCGHSVN 2906
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSSQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCESGLFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +W+CDE+ DCS D DE + + Q + +CIP + CD DC
Sbjct: 81 IPSSWVCDEDKDCS-----DGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCP- 134
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 ----DGSDERNCHYPTCDQLTC--------ANGACYNTSQRCDQKVDCRDSSDEA 177
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 139/389 (35%), Gaps = 113/389 (29%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GK 216
P +CGS + +CV CDG DC + DE G F N C+P F+C G+
Sbjct: 1020 PPTQQCGSLSFPCNNGKCVPSFFRCDGVDDCHDNSDEHQCGVF-NNTCSPSAFACVRGGQ 1078
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CIP W CD DCL DGSDE N H C + C + CIP +W+CD + DCS
Sbjct: 1079 CIPGQWHCDRQNDCL-DGSDEQNCPTHATSSTCPSTSFTCD-NHVCIPKDWVCDTDNDCS 1136
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
D D +DE + C + Q +C
Sbjct: 1137 DGSDEKNCQASGTCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAGCVLN-CTSAQFKC 1195
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
A CI + CD DC DN+DE + +CH +E +C C+ +
Sbjct: 1196 ADGSSCINSRYRCDGVYDCR-----DNSDEAGCP--TRPPGMCHLDEFQCQGDGTCIPNT 1248
Query: 358 KFCDGKPDCSNGEDEGP------------------------FCNNKADCENLKCSHKCSP 393
CDG PDC +G DE C+ DC ++ C
Sbjct: 1249 WECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCRDMSDEKDCPT 1308
Query: 394 TPRGAMCFCPAGQN--PNKTQCV----------------------DADECL-IDGSCDQT 428
P CP+ Q P + C+ + D C +G C
Sbjct: 1309 QP----FHCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQ 1364
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C C GY L D K+C +N
Sbjct: 1365 CMQGPFGATCLCPLGYQLANDTKTCEDIN 1393
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGTNREVVVSTAFH---SFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C C QF+C G CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 G-NGRCVPYHYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPHTCPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPF 375
P
Sbjct: 2856 NPI 2858
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 96/424 (22%), Positives = 159/424 (37%), Gaps = 126/424 (29%)
Query: 48 FKRILNGT-HTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLN---------SWD 95
+ IL G + +AL+F+ + L +I ++Q + + L ++N + D
Sbjct: 3221 YSLILQGLGNVVALDFDRVEKRLYWIDAEKQIIERMFLNKTNRETIINHRLRRAESLAVD 3280
Query: 96 LPAPEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL---------- 141
+ ++ D + + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 3281 WVSRHVYWADWGVHAYIGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYI 3340
Query: 142 -------------------------------YWCDSHLNTVESV-RVDGSHNAVLCH--- 166
+W D + TVE + DGS VL +
Sbjct: 3341 EFSDLEGHHRHTVYDGSLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTH 3400
Query: 167 -PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
P ++ + +S C G + G C+ C G P+ ++
Sbjct: 3401 KPFDIHVYHPYRQPIMSNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTV 3451
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS------------- 272
D C+ C + Q C ++KCIP W CD + DCS
Sbjct: 3452 QLRD--------RTLCMPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRF 3503
Query: 273 ----------------------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
D D +DED + H+C + + QCA +K+CIP +W
Sbjct: 3504 CRLGQFQCRDGNCTSPQALCNARQDCADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSW 3562
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
CD DC +DN+DED S C P + +C ++ +C+ S CD DC +
Sbjct: 3563 QCDSVNDC-----LDNSDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGD 3613
Query: 369 GEDE 372
DE
Sbjct: 3614 YSDE 3617
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH +E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 1230 MCHLDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAW 1289
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC + D D P H C + Q QC CI + LCD DC
Sbjct: 1290 ICDGDNDCRDMSDEKDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDC 1339
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4160 KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 4218
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 135/370 (36%), Gaps = 52/370 (14%)
Query: 13 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI 72
K+ I N L E ++C T D + D K + L L R Q + +
Sbjct: 771 GTGKEVITANRL--ESVECLTFDWISRNLYWTDGGLKSVT----VLRLADKSRRQIISNL 824
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N S+ + L+ W PA ++ +A G + P+V ++ WP+ L
Sbjct: 825 N--NPRSIVVHPTAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGL 874
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
ID++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 875 AIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FI 927
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD-------EPNTCIHQC 245
G + G + + I + L+ GS+ C H C
Sbjct: 928 TDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQTTHANGDCSHFC 987
Query: 246 F---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
F N Q C C L ++M C D + + QC + C + K
Sbjct: 988 FPVPNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSLSFPCN-NGK 1036
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P + CD DD DN+DE F++ C P+ C QC+ CD
Sbjct: 1037 CVPSFFRCD-----GVDDCHDNSDEHQCGVFNNT---CSPSAFACVRGGQCIPGQWHCDR 1088
Query: 363 KPDCSNGEDE 372
+ DC +G DE
Sbjct: 1089 QNDCLDGSDE 1098
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D D+LYW D+ L +E + G++ V+
Sbjct: 2530 NAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQKIERSTLTGTNREVV 2589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL S D+P I
Sbjct: 2146 NGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|156392329|ref|XP_001636001.1| predicted protein [Nematostella vectensis]
gi|156223100|gb|EDO43938.1| predicted protein [Nematostella vectensis]
Length = 678
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/383 (32%), Positives = 165/383 (43%), Gaps = 75/383 (19%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R D S C NE RC +C+ + CD + DC++ DE N C P +F+C
Sbjct: 29 RSDESEPTTTCSANEFRC-DDGRCITSTFRCDREFDCTDRSDERGCVNKTCAPYEFTCAF 87
Query: 215 -GKCIPESWKCDGFVDCLEDGSDEPN------TCI----HQCFNGQVQCALSKKCIPHNW 263
G+CIP ++CD DCL DGSDE N TC H C NG +C+ W
Sbjct: 88 SGRCIPGRFRCDHRSDCL-DGSDEQNCQNAAKTCNPVTDHTCRNG--------RCVLKEW 138
Query: 264 LCDEEMDCSTDDIVDNTDED------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC- 316
LCD DD D++DED +C + CA C+ W+CD E DC
Sbjct: 139 LCD-----GMDDCGDSSDEDNCLTRPTPPPVKCRKNERMCADGNGCVHRRWICDGERDCL 193
Query: 317 ---------------------------------STDDIVDNTDEDW-DKYF--SHNAVLC 340
TD+ D +DE KY + +C
Sbjct: 194 DGSDEAGCGTIGCSSDEFTCTNQKCIPLPQKCDGTDNCGDGSDEKMCRKYLFSTQPGQVC 253
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+ RCGSS C+A SK CD P C +GEDE ++ N C C+ T C
Sbjct: 254 PRDHFRCGSSTICIANSKVCDATPHCPHGEDERNCDIDECKSFNGHCLQLCTNTKTSFYC 313
Query: 401 FCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C +G ++ C D +EC I G C Q C NT S+ CSC EGY L PDG+ C A+
Sbjct: 314 SCFSGYELMDDRKSCRDINECEIPGMCSQKCYNTKGSFKCSCMEGYVLEPDGRRCKALG- 372
Query: 459 PQDEPASIIFSSTVDIRRIHLNG 481
P+ ++F+ IR I +G
Sbjct: 373 PR---PYVLFTDRNSIRLIMTDG 392
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 126/352 (35%), Gaps = 119/352 (33%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD--EPNTCIHQCFNGQVQCALSKKCIPHN 262
C P F+C +C+P S++CDG DC D SD EP T C + +C +CI
Sbjct: 1 CPPSDFTCANSQCVPNSFRCDGENDC-GDRSDESEPTT---TCSANEFRCD-DGRCITST 55
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 316
+ CD E DC+ D +DE C + CA S +CIP + CD DC
Sbjct: 56 FRCDREFDCT-----DRSDERGCVNKTCAPYEFTCAFSGRCIPGRFRCDHRSDCLDGSDE 110
Query: 317 -------------------------------STDDIVDNTDED-WDKYFSHNAVLCHPNE 344
DD D++DED + V C NE
Sbjct: 111 QNCQNAAKTCNPVTDHTCRNGRCVLKEWLCDGMDDCGDSSDEDNCLTRPTPPPVKCRKNE 170
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--------HKCSPTPR 396
C N CV CDG+ DC +G DE A C + CS KC P P+
Sbjct: 171 RMCADGNGCVHRRWICDGERDCLDGSDE-------AGCGTIGCSSDEFTCTNQKCIPLPQ 223
Query: 397 --------------------------GAMC------------------------FCPAGQ 406
G +C CP G+
Sbjct: 224 KCDGTDNCGDGSDEKMCRKYLFSTQPGQVCPRDHFRCGSSTICIANSKVCDATPHCPHGE 283
Query: 407 NPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ D DEC +G C Q CTNT S+ CSC GY L D KSC +N
Sbjct: 284 DERN---CDIDECKSFNGHCLQLCTNTKTSFYCSCFSGYELMDDRKSCRDIN 332
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A M G R L++ ++++ P+ L IDY+ LYW DS L+ ++ ++G+ V+
Sbjct: 514 KIERASMDGTARKVLISGEHLERPAGLAIDYSTRRLYWIDSKLDVIKHCNLNGTEVRVV 572
>gi|395540951|ref|XP_003772412.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Sarcophilus harrisii]
Length = 3562
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/336 (35%), Positives = 163/336 (48%), Gaps = 37/336 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTP-GQFSCGMGKCI 218
+A C PN+ C +S +C+ +S CD DC + DE C C P QF+C G+CI
Sbjct: 997 SARTCPPNQFSC-ASGRCIPISWTCDLDDDCGDRSDESASCAYPTCFPLTQFTCNNGRCI 1055
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIH--------QCFNGQVQCALSKKCIPHNWLCDEEMD 270
+W+CD DC DGSDE TC C + QC L CIP W CD + D
Sbjct: 1056 NMNWRCDNEKDC-GDGSDE-KTCPEPAATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTD 1113
Query: 271 CSTDDIVDNTDED--WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
C +D++DE H C N + C S +CI W+CD + DC VDN+DE
Sbjct: 1114 C-----MDSSDEKNCEGITHVCDPNVKFGCKDSGRCISKAWVCDGDSDC-----VDNSDE 1163
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ + + A P+ +++ C+ K CDG DC +G DEG C+ + N C
Sbjct: 1164 ENCESLACKA----PSHPCANNTSVCLTPDKLCDGNDDCGDGSDEGDLCD-QCSLNNGGC 1218
Query: 388 SHKCSPTP-RGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
SH CS P G +C CP G P+ C C C Q C S CSC EG+
Sbjct: 1219 SHNCSVAPGEGILCSCPLGMELAPDNHTCQIQSYCAKHLKCSQKCEQNKFSVKCSCYEGW 1278
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
L PDG+SC +++ + IIFS+ +IRRI L+
Sbjct: 1279 MLEPDGESCQSLDPFK---PFIIFSNRHEIRRIDLH 1311
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 163/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC GM
Sbjct: 2751 DEAHCNKFCSEAQFEC-QNHRCISKEWLCDGSDDCGDGSDEAAPCQGKTCGPSSFSCPGM 2809
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+P+ W CDG DC DG+DE C++ C + C +++CIP +++CD + D
Sbjct: 2810 HFCVPDRWLCDGDKDC-ADGADESVAAGCLYNSTCDEREFMCQ-NRQCIPKHFVCDHDRD 2867
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2868 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2915
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CV+ S C+G+ DC +G DE N+
Sbjct: 2916 ----APKNPHCTSPEHKCNASSQFLCESGRCVSESLVCNGQNDCGDGSDERSCHINECLS 2971
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2972 RKLSGCSQDCEDLKIGYKCRCRPGFRLKDDGRTCADVDECSTSFPCSQRCINTHGSYKCL 3031
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+G+
Sbjct: 3032 CVEGYAPRGGDAHSCKAVT---DEEPFLIFANRYYLRKLNLDGT 3072
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 105/204 (51%), Gaps = 10/204 (4%)
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E D C Q C CI W CD E DC D +DE + C
Sbjct: 84 EGGDVPKTCSPKQFACRDQITCISKGWRCDGEKDCP-----DGSDEAPEICPQSKVQRCQ 138
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMC 400
PNE C + CV +S+ C+G DC +G DEG C +A+C C H C PT G C
Sbjct: 139 PNEHNCPGTELCVPMSRLCNGVQDCFDGTDEGAHCRELRANCSRAGCQHHCVPTLSGPSC 198
Query: 401 FCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+C + Q+ NK+ C D DEC + G+C Q CTNT ++ CSC EGY L+PD +SC A N
Sbjct: 199 YCNSSFQLQSDNKS-CKDFDECSVYGTCSQVCTNTDGAFTCSCVEGYLLQPDNRSCKAKN 257
Query: 458 VPQDEPASIIFSSTVDIRRIHLNG 481
P D PA ++ +++ +I +L+G
Sbjct: 258 EPVDRPAVLLIANSQNILATYLSG 281
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 100/198 (50%), Gaps = 16/198 (8%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
++C+ CD + DC + DE C +C PGQF C G C ++ CDG DC +D
Sbjct: 3369 DKCIPFWWKCDTEDDCGDHSDEPHDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QDN 3427
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE N IH C Q +C + +CIP + C+ + +C D DE C Q
Sbjct: 3428 SDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPNQ 3482
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QCA++K+CIP W+CD + DC VD +DE + + C +E RC S +C+
Sbjct: 3483 FQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRCI 3533
Query: 355 ALSKFCDGKPDCSNGEDE 372
CDG+ DC +G DE
Sbjct: 3534 PARWKCDGEDDCGDGSDE 3551
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 140/319 (43%), Gaps = 54/319 (16%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ L+W +
Sbjct: 770 SLDIPAGRLYWVDAFYDRIETVLLNGTDRK-IVYEGPELNHAFGLCHHGSYLFWTEYRSG 828
Query: 150 TVESVRVD--GSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 829 SVYRLERGPPGTTPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 888
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 889 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 948
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N+ C
Sbjct: 949 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNSTC---SARTCPPN 1004
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 1005 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 1054
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ ++ CD + DC +G DE
Sbjct: 1055 INMNWRCDNEKDCGDGSDE 1073
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 151/379 (39%), Gaps = 80/379 (21%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E+V ++G+
Sbjct: 743 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETVLLNGTDRKIVY 802
Query: 160 ------HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS------NGEDEGPFCNAECTP 207
H LCH + + ++ + G P + E F
Sbjct: 803 EGPELNHAFGLCHHGSYLFWTEYRSGSVYRLERGPPGTTPTVTLLRSERPPIFEIRMYDA 862
Query: 208 GQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTCIHQ 244
Q G KC P S +C DG V CL + S P Q
Sbjct: 863 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP---Q 918
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKK 302
C G+ CA S +CI W CD + DC +DN+DE HQ C + + +C + +
Sbjct: 919 CQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE-NNR 971
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP+ WLCD + DC + N+ + +A C PN+ C +S +C+ +S CD
Sbjct: 972 CIPNRWLCDGDNDCGNSEDESNS--------TCSARTCPPNQFSC-ASGRCIPISWTCDL 1022
Query: 363 KPDCSNGEDEGPFCN------------NKADCENL--KCSHK--CSPTPRGAMCFCPAGQ 406
DC + DE C N C N+ +C ++ C C PA
Sbjct: 1023 DDDCGDRSDESASCAYPTCFPLTQFTCNNGRCINMNWRCDNEKDCGDGSDEKTCPEPAAT 1082
Query: 407 NPNKTQCVDADECLIDGSC 425
P D +C +DG C
Sbjct: 1083 RPPGGCHTDEFQCRLDGLC 1101
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3437 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCAITKRCIPRVW 3496
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CD DC+ DGSDEP C C + +C S +CIP W CD E DC
Sbjct: 3497 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG 3546
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 104/269 (38%), Gaps = 80/269 (29%)
Query: 168 NELRCGSSNQCVALSKFCDG----------KP---------------------------- 189
+E C ++ +C++ S CDG KP
Sbjct: 2554 DEFEC-ANGECISFSLTCDGTSHCKDKSDEKPSYCNTRRCKKTFRQCNNGRCVPNTLWCN 2612
Query: 190 ---DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
DC +G DE P C +F C G CI S +C+ F+DC ED SDE N C
Sbjct: 2613 GADDCGDGSDEIPCNKTACAVDEFRCRDGSCISNSSRCNQFLDC-EDASDEMNCSTTDCS 2671
Query: 246 --FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
F V+ C + C +W+CD DC D +DE C + +C
Sbjct: 2672 SYFRLGVKGVTFLPCERTSLCYASSWVCDGANDCG-----DYSDE-----RDCPGVKPRC 2721
Query: 298 AL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
L S +CIP +W CD+E DC + DE +H C + C ++
Sbjct: 2722 PLNYFPCPSGRCIPMSWTCDKEDDCEHGE-----DE------AHCNKFCSEAQFEC-QNH 2769
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+C++ CDG DC +G DE C K
Sbjct: 2770 RCISKEWLCDGSDDCGDGSDEAAPCQGKT 2798
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ ++
Sbjct: 3195 IGRIGMDGSGRSVVVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHIV 3251
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2058 RIERSRLDGTERVVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEN 2112
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 25/173 (14%)
Query: 93 SWDLPAPEIFPLDE------RLEKAGMHGENRSPLV---------TKNIQWPSS---LVI 134
+++ P + PL++ RL A + G + P + T I P + +
Sbjct: 2 TFETPPSSLLPLEKSKLDKPRLHLASLPGADPDPALWIGRPFSAHTPKIAPPGAGRDASL 61
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
+++ + + R +G C P + C C++ CDG+ DC +G
Sbjct: 62 GFSRRVFSGPGPRQPRRLAARPEGGDVPKTCSPKQFACRDQITCISKGWRCDGEKDCPDG 121
Query: 195 EDEGP-FCN----AECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
DE P C C P + +C G C+P S C+G DC DG+DE C
Sbjct: 122 SDEAPEICPQSKVQRCQPNEHNCPGTELCVPMSRLCNGVQDCF-DGTDEGAHC 173
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ ++I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2384 IMRAALSGANVLTLIERDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2440
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 20/196 (10%)
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWL 264
T +F C G+CI S CDG C + ++P+ C +C QC + +C+P+
Sbjct: 2552 TQDEFECANGECISFSLTCDGTSHCKDKSDEKPSYCNTRRCKKTFRQCN-NGRCVPNTLW 2610
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVD 323
C+ DC D +DE C + +C CI ++ C++ +DC D ++
Sbjct: 2611 CNGADDCG-----DGSDEIPCNKTACAVDEFRCR-DGSCISNSSRCNQFLDCEDASDEMN 2664
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ D YF L C ++ C A S CDG DC + DE DC
Sbjct: 2665 CSTTDCSSYFRLGVKGV--TFLPCERTSLCYASSWVCDGANDCGDYSDE-------RDCP 2715
Query: 384 NLK--CSHKCSPTPRG 397
+K C P P G
Sbjct: 2716 GVKPRCPLNYFPCPSG 2731
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 412 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 469
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1432 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1484
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1485 YSARYDGSGHMEVLRGHEF 1503
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 3478 CAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDE 3510
>gi|149022162|gb|EDL79056.1| rCG26871, isoform CRA_a [Rattus norvegicus]
Length = 4660
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 163/332 (49%), Gaps = 38/332 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++ C S+ QC+ CD DC +G DE P C+ Q +C G C
Sbjct: 105 GTTCSAQQMTC-SNGQCIPSEYRCDHVSDCPDGSDERNCHYPTCD------QLTCANGAC 157
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S +CD VDC D SDE N C C + +C S +CI ++CD + DC
Sbjct: 158 YNTSQRCDQKVDC-RDSSDEAN-CTTLCSQKEFECG-SGECILRAYVCDHDNDCE----- 209
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
DN+DE + C Q C+ + +CI NW+CD + DC D+ DED + SH+
Sbjct: 210 DNSDERNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQSHH 263
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCS 392
C+P E C S +C+++ K CDG PDC G+DE + + C L C ++C
Sbjct: 264 R--CYPREWACPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCH 321
Query: 393 PTPRGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G CFCP G N N ++ C+D D+C I G CDQ C N + C C EGY L
Sbjct: 322 QTPFGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILE-R 380
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C + + AS+IFS+ D+ L+G
Sbjct: 381 GQHCKSSD--SFSAASVIFSNGRDLLVGDLHG 410
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC++G DE C CT QF C G CI ++
Sbjct: 1150 CQPTQFRC-PDHRCISPLYVCDGDKDCADGSDEAG-CVLNCTSAQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-RDNSDEAGCPTRPPGMCHLDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI W+CD + DC D+ D D + C
Sbjct: 1262 DEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CLCPLGYQLANDTKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTG 1433
Query: 458 VPQDEPASIIFS 469
+ P ++ S
Sbjct: 1434 --SENPLLVVAS 1443
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 165/410 (40%), Gaps = 105/410 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCLSPQRCIPSY 2882
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC DGSDEP+TC H C Q QC + +CI NW+CD + DC D+ D
Sbjct: 2883 WFCDGEADC-ADGSDEPDTCGHSVNTCRASQFQCD-NGRCISGNWVCDGDNDCG--DMSD 2938
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS----------------- 317
+ C + Q C S ++CIP W+CD + DCS
Sbjct: 2939 EDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRTCSAG 2998
Query: 318 ------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+D D +DE Y CH N+ C + +C+
Sbjct: 2999 EFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPP-----CHANQFTC-QNGRCIPRFFV 3052
Query: 360 CDGKPDCSNGEDE---------------------------GPFCNNKADCEN-------- 384
CD DC +G DE G CN+ DC +
Sbjct: 3053 CDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEKGCG 3112
Query: 385 ---------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNT 432
+C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 INECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCENV 3172
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 3173 VGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 3219
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 3761 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 3819
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 3820 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 3872
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 3873 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 3929
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 3930 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 3987
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 3988 GFICSCRPGFKPSTLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 4047
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 4048 RCAA----DGSPPLLLLPENVRIRK 4068
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3513 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 3572
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP +W CD DC +DN+
Sbjct: 3573 LCNARQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNS 3625
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 3626 DEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTTAAYN 3679
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3680 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3596 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 3654
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 3655 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 3714 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 3772
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 3773 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 3821
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 3822 RADCLDASDE 3831
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ CD DC +G DE P A C F+CG G+C+P ++CD + DC D
Sbjct: 2712 HCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRCVPYHYRCDYYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE H C
Sbjct: 2771 SDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPHTCPPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S +C+
Sbjct: 2828 TKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCLSPQRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKAD 381
FCDG+ DC++G DE C + +
Sbjct: 2880 PSYWFCDGEADCADGSDEPDTCGHSVN 2906
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSSQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCESGLFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +W+CDE+ DCS D DE + + Q + +CIP + CD DC
Sbjct: 81 IPSSWVCDEDKDCS-----DGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCP- 134
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 ----DGSDERNCHYPTCDQLTC--------ANGACYNTSQRCDQKVDCRDSSDEA 177
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 139/389 (35%), Gaps = 113/389 (29%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GK 216
P +CGS + +CV CDG DC + DE G F N C+P F+C G+
Sbjct: 1020 PPTQQCGSLSFPCNNGKCVPSFFRCDGVDDCHDNSDEHQCGVF-NNTCSPSAFACVRGGQ 1078
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CIP W CD DCL DGSDE N H C + C + CIP +W+CD + DCS
Sbjct: 1079 CIPGQWHCDRQNDCL-DGSDEQNCPTHATSSTCPSTSFTCD-NHVCIPKDWVCDTDNDCS 1136
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
D D +DE + C + Q +C
Sbjct: 1137 DGSDEKNCQASGTCQPTQFRCPDHRCISPLYVCDGDKDCADGSDEAGCVLN-CTSAQFKC 1195
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
A CI + CD DC DN+DE + +CH +E +C C+ +
Sbjct: 1196 ADGSSCINSRYRCDGVYDCR-----DNSDEAGCP--TRPPGMCHLDEFQCQGDGTCIPNT 1248
Query: 358 KFCDGKPDCSNGEDEGP------------------------FCNNKADCENLKCSHKCSP 393
CDG PDC +G DE C+ DC ++ C
Sbjct: 1249 WECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCRDMSDEKDCPT 1308
Query: 394 TPRGAMCFCPAGQN--PNKTQCV----------------------DADECL-IDGSCDQT 428
P CP+ Q P + C+ + D C +G C
Sbjct: 1309 QP----FHCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQ 1364
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C C GY L D K+C +N
Sbjct: 1365 CMQGPFGATCLCPLGYQLANDTKTCEDIN 1393
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGTNREVVVSTAFH---SFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C C QF+C G CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 G-NGRCVPYHYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPHTCPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPF 375
P
Sbjct: 2856 NPI 2858
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH +E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 1230 MCHLDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAW 1289
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC + D D P H C + Q QC CI + LCD DC
Sbjct: 1290 ICDGDNDCRDMSDEKDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDC 1339
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 129/348 (37%), Gaps = 110/348 (31%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 3348 IGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 3407
Query: 142 ---------------YWCDSHLNTVESV-RVDGSHNAVLCH----PNELRCGSSNQCVAL 181
+W D + TVE + DGS VL + P ++ + +
Sbjct: 3408 SLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVYHPYRQPIM 3467
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
S C G + G C+ C G P+ ++ D C
Sbjct: 3468 SNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTVQLRD--------RTLC 3510
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS----------------------------- 272
+ C + Q C ++KCIP W CD + DCS
Sbjct: 3511 MPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSP 3570
Query: 273 ------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D D +DED + H+C + + QCA +K+CIP +W CD DC +DN
Sbjct: 3571 QALCNARQDCADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDN 3624
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DED S C P + +C ++ +C+ S CD DC + DE
Sbjct: 3625 SDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 3668
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4211 KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 4269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 135/370 (36%), Gaps = 52/370 (14%)
Query: 13 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI 72
K+ I N L E ++C T D + D K + L L R Q + +
Sbjct: 771 GTGKEVITANRL--ESVECLTFDWISRNLYWTDGGLKSVT----VLRLADKSRRQIISNL 824
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N S+ + L+ W PA ++ +A G + P+V ++ WP+ L
Sbjct: 825 N--NPRSIVVHPTAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGL 874
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
ID++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 875 AIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FI 927
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD-------EPNTCIHQC 245
G + G + + I + L+ GS+ C H C
Sbjct: 928 TDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQTTHANGDCSHFC 987
Query: 246 F---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
F N Q C C L ++M C D + + QC + C + K
Sbjct: 988 FPVPNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSLSFPCN-NGK 1036
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P + CD DD DN+DE F++ C P+ C QC+ CD
Sbjct: 1037 CVPSFFRCD-----GVDDCHDNSDEHQCGVFNNT---CSPSAFACVRGGQCIPGQWHCDR 1088
Query: 363 KPDCSNGEDE 372
+ DC +G DE
Sbjct: 1089 QNDCLDGSDE 1098
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D D+LYW D+ L +E + G++ V+
Sbjct: 2530 NAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQKIERSTLTGTNREVV 2589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL S D+P I
Sbjct: 2146 NGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|13562118|ref|NP_110454.1| low-density lipoprotein receptor-related protein 2 precursor
[Rattus norvegicus]
gi|1708867|sp|P98158.1|LRP2_RAT RecName: Full=Low-density lipoprotein receptor-related protein 2;
Short=LRP-2; AltName: Full=Glycoprotein 330;
Short=gp330; AltName: Full=Megalin; Flags: Precursor
gi|561853|gb|AAA51369.1| megalin [Rattus norvegicus]
Length = 4660
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 163/332 (49%), Gaps = 38/332 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++ C S+ QC+ CD DC +G DE P C+ Q +C G C
Sbjct: 105 GTTCSAQQMTC-SNGQCIPSEYRCDHVSDCPDGSDERNCHYPTCD------QLTCANGAC 157
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S +CD VDC D SDE N C C + +C S +CI ++CD + DC
Sbjct: 158 YNTSQRCDQKVDC-RDSSDEAN-CTTLCSQKEFECG-SGECILRAYVCDHDNDCE----- 209
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
DN+DE + C Q C+ + +CI NW+CD + DC D+ DED + SH+
Sbjct: 210 DNSDERNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQSHH 263
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCS 392
C+P E C S +C+++ K CDG PDC G+DE + + C L C ++C
Sbjct: 264 R--CYPREWACPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCH 321
Query: 393 PTPRGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G CFCP G N N ++ C+D D+C I G CDQ C N + C C EGY L
Sbjct: 322 QTPFGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILE-R 380
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C + + AS+IFS+ D+ L+G
Sbjct: 381 GQHCKSSD--SFSAASVIFSNGRDLLVGDLHG 410
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC++G DE C CT QF C G CI ++
Sbjct: 1150 CQPTQFRC-PDHRCISPLYVCDGDKDCADGSDEAG-CVLNCTSAQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-RDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI W+CD + DC D+ D D + C
Sbjct: 1262 DEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CLCPLGYQLANDTKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTG 1433
Query: 458 VPQDEPASIIFS 469
+ P ++ S
Sbjct: 1434 --SENPLLVVAS 1443
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 165/410 (40%), Gaps = 105/410 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCLSPQRCIPSY 2882
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC DGSDEP+TC H C Q QC + +CI NW+CD + DC D+ D
Sbjct: 2883 WFCDGEADC-ADGSDEPDTCGHSVNTCRASQFQCD-NGRCISGNWVCDGDNDCG--DMSD 2938
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS----------------- 317
+ C + Q C S ++CIP W+CD + DCS
Sbjct: 2939 EDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRTCSAG 2998
Query: 318 ------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+D D +DE Y CH N+ C + +C+
Sbjct: 2999 EFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPP-----CHANQFTC-QNGRCIPRFFV 3052
Query: 360 CDGKPDCSNGEDE---------------------------GPFCNNKADCEN-------- 384
CD DC +G DE G CN+ DC +
Sbjct: 3053 CDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEKGCG 3112
Query: 385 ---------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNT 432
+C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 INECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCENV 3172
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 3173 VGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 3219
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 3761 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 3819
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 3820 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 3872
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 3873 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 3929
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 3930 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 3987
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 3988 GFICSCRPGFKPSTSDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 4047
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 4048 RCAA----DGSPPLLLLPENVRIRK 4068
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3513 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 3572
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP +W CD DC +DN+
Sbjct: 3573 LCNARQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNS 3625
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 3626 DEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTTAAYN 3679
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3680 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3596 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 3654
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 3655 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 3714 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 3772
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 3773 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 3821
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 3822 RADCLDASDE 3831
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ CD DC +G DE P A C F+CG G+C+P ++CD + DC D
Sbjct: 2712 HCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRCVPYHYRCDYYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE H C
Sbjct: 2771 SDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPHTCPPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S +C+
Sbjct: 2828 TKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCLSPQRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKAD 381
FCDG+ DC++G DE C + +
Sbjct: 2880 PSYWFCDGEADCADGSDEPDTCGHSVN 2906
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 131/347 (37%), Gaps = 73/347 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C P+ C QC+ CD + DC +G DE ++ C F+C CIP+
Sbjct: 1066 CSPSAFACVRGGQCIPGQWHCDRQNDCLDGSDEQNCPTHATSSTCPSTSFTCDNHVCIPK 1125
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE N C Q +C +CI ++CD + DC+ D
Sbjct: 1126 DWVCDTDNDC-SDGSDEKNCQASGTCQPTQFRCP-DHRCISPLYVCDGDKDCA-----DG 1178
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE + C + Q +CA CI + CD DC DN+DE + +
Sbjct: 1179 SDEAGCVLN-CTSAQFKCADGSSCINSRYRCDGVYDCR-----DNSDEAGCP--TRPPGM 1230
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------F 375
CHP+E +C C+ + CDG PDC +G DE
Sbjct: 1231 CHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAWI 1290
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV------------------- 414
C+ DC ++ C P CP+ Q P + C+
Sbjct: 1291 CDGDNDCRDMSDEKDCPTQP----FHCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDES 1346
Query: 415 ---DADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ D C +G C C C C GY L D K+C +N
Sbjct: 1347 PLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLANDTKTCEDIN 1393
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSSQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCESGLFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +W+CDE+ DCS D DE + + Q + +CIP + CD DC
Sbjct: 81 IPSSWVCDEDKDCS-----DGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCP- 134
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 ----DGSDERNCHYPTCDQLTC--------ANGACYNTSQRCDQKVDCRDSSDEA 177
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGTNREVVVSTAFH---SFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C C QF+C G CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 G-NGRCVPYHYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPHTCPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPF 375
P
Sbjct: 2856 NPI 2858
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CHP+E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 1230 MCHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAW 1289
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC + D D P H C + Q QC CI + LCD DC
Sbjct: 1290 ICDGDNDCRDMSDEKDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDC 1339
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 129/348 (37%), Gaps = 110/348 (31%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 3348 IGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 3407
Query: 142 ---------------YWCDSHLNTVESV-RVDGSHNAVLCH----PNELRCGSSNQCVAL 181
+W D + TVE + DGS VL + P ++ + +
Sbjct: 3408 SLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVYHPYRQPIM 3467
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
S C G + G C+ C G P+ ++ D C
Sbjct: 3468 SNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTVQLRD--------RTLC 3510
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS----------------------------- 272
+ C + Q C ++KCIP W CD + DCS
Sbjct: 3511 MPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSP 3570
Query: 273 ------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D D +DED + H+C + + QCA +K+CIP +W CD DC +DN
Sbjct: 3571 QALCNARQDCADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDN 3624
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DED S C P + +C ++ +C+ S CD DC + DE
Sbjct: 3625 SDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 3668
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4211 KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 4269
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 135/370 (36%), Gaps = 52/370 (14%)
Query: 13 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI 72
K+ I N L E ++C T D + D K + L L R Q + +
Sbjct: 771 GTGKEVITANRL--ESVECLTFDWISRNLYWTDGGLKSVT----VLRLADKSRRQIISNL 824
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N S+ + L+ W PA ++ +A G + P+V ++ WP+ L
Sbjct: 825 N--NPRSIVVHPTAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGL 874
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
ID++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 875 AIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FI 927
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD-------EPNTCIHQC 245
G + G + + I + L+ GS+ C H C
Sbjct: 928 TDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQTTHANGDCSHFC 987
Query: 246 F---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
F N Q C C L ++M C D + + QC + C + K
Sbjct: 988 FPVPNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSLSFPCN-NGK 1036
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P + CD DD DN+DE F++ C P+ C QC+ CD
Sbjct: 1037 CVPSFFRCD-----GVDDCHDNSDEHQCGVFNNT---CSPSAFACVRGGQCIPGQWHCDR 1088
Query: 363 KPDCSNGEDE 372
+ DC +G DE
Sbjct: 1089 QNDCLDGSDE 1098
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D D+LYW D+ L +E + G++ V+
Sbjct: 2530 NAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQKIERSTLTGTNREVV 2589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL S D+P I
Sbjct: 2146 NGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
>gi|405959325|gb|EKC25376.1| Prolow-density lipoprotein receptor-related protein 1 [Crassostrea
gigas]
Length = 3542
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/326 (34%), Positives = 144/326 (44%), Gaps = 54/326 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C P + RC ++ C+ + CD DC +G DEG FC C F CG +CI
Sbjct: 262 CGPTQFRCNNT-LCINMRFKCDTDNDCGDGSDEGEFCGTHTCDVDHFQCGDKRCIYTRKL 320
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC DGSDE + QC +G+ C ++CIP + CD DC +D D D
Sbjct: 321 CDGQEDCY-DGSDEKDCPPLQCADGKWTCKKRRQCIPERYHCDGAPDC--EDETDELDCP 377
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--------WDKYFS- 334
C + C CIP +W CD + DC D +DE W F
Sbjct: 378 TRGEKTCLVDEFNCT-QGGCIPKSWKCDGQPDCE-----DGSDEPDSCPEPTCWSDRFRC 431
Query: 335 ------------------------HNAVLCHPNELRC--------GSSNQCVALSKFCDG 362
++ C P +C G+S C+ +K CDG
Sbjct: 432 ANGRCISQSWICDGDDDCGDNSDEDQSLTCPPPTFKCPHYQWECPGNSRVCINRTKVCDG 491
Query: 363 KPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT-QCVDADECL 420
DC NG+DE P CN ++ EN C+ C TPRGA C CP GQ N T +CVD +EC
Sbjct: 492 NADCPNGDDESPICNTDECGVENGHCNFLCIQTPRGAECVCPVGQVLNGTKECVDDNECD 551
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTL 446
G C Q C NT S+ C+C GY L
Sbjct: 552 PPGKCSQHCINTKGSFKCTCDPGYEL 577
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 163/366 (44%), Gaps = 61/366 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCI 218
+V C C +++C+ ++ +CDG DC GEDE P C N C+ QF+C G+CI
Sbjct: 1890 SVACTDGYYECKITHKCIPMNWYCDGDDDCGMGEDEMPNCKKTNNTCSSNQFTCASGRCI 1949
Query: 219 PESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCA------------ 253
+ W CDG DC+++ + P TC +G+ C
Sbjct: 1950 SKRWVCDGDDDCMDNSDEAPELKCVERACPADTFTCESNKLSGRYSCIDKRLVCDGVKNC 2009
Query: 254 ----------LSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWD-KFHQCFNGQVQCALSK 301
S+ C P + C + C DD D +DE K+ C G+ +C +K
Sbjct: 2010 VKGEDEMMNCTSRTCQPGEFQCTNDFHCDHVDDCGDGSDETEACKYPPCNEGKFECD-NK 2068
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI +++CD + DC TD+ +K +H C E +C + +C+ C+
Sbjct: 2069 RCIAESFVCDGDNDC--------TDKSDEKNCTHTENKCPNGEFQC-KNGKCIDYKLVCN 2119
Query: 362 GKPDCSNGEDEGPFCNNKADCENL---KCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
+ DC + DE N +CE++ C HKC T +C C G +K C D
Sbjct: 2120 KEYDCEDESDENKC--NVNECESILTNNCEHKCRDTITSFVCECDPGYKLQTDKKSCEDI 2177
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
+EC + GSC QTC N+ +Y C C G+ +G+SC + + +IF++ IR
Sbjct: 2178 NECTEVPGSCSQTCINSPGNYTCKCENGFKKEINGRSCKKTD---NVTPWLIFTNKYYIR 2234
Query: 476 RIHLNG 481
+ +G
Sbjct: 2235 ELSTDG 2240
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 105/230 (45%), Gaps = 23/230 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P +C ++N+C+ L CDG DC + DE N C P QF C CI +KC
Sbjct: 223 CGPQHFQC-NNNRCIDLKWKCDGDNDCGDSSDEIGCSNKTCGPTQFRCNNTLCINMRFKC 281
Query: 225 DGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC DGSDE C H C QC K+CI LCD + DC D +DE
Sbjct: 282 DTDNDC-GDGSDEGEFCGTHTCDVDHFQCG-DKRCIYTRKLCDGQEDC-----YDGSDEK 334
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
QC +G+ C ++CIP + CD DC D TDE + C +
Sbjct: 335 DCPPLQCADGKWTCKKRRQCIPERYHCDGAPDCE-----DETDE--LDCPTRGEKTCLVD 387
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC------NNKADCENLKC 387
E C + C+ S CDG+PDC +G DE C +++ C N +C
Sbjct: 388 EFNC-TQGGCIPKSWKCDGQPDCEDGSDEPDSCPEPTCWSDRFRCANGRC 436
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 153/382 (40%), Gaps = 88/382 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE----CTPGQFSCGMGKCIPE 220
CHP ++ +C+ CD DC + DE P A C+ +F C KCI
Sbjct: 2731 CHPTGDWQCANKRCIPKRWLCDFDSDCDDKSDEDPKLCANLYRNCSESEFRCDNQKCIRG 2790
Query: 221 SWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W+CD DC ++ ++P C HQC Q QCA S CI + LCD +C D
Sbjct: 2791 KWRCDHDNDCGDNSDEDPVYCKKYHQCEGDQFQCA-SGHCISNKTLCDGRRNCQ-----D 2844
Query: 279 NTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+DE + F G C SK CIP W CD DC D +DE+ D
Sbjct: 2845 MSDE--KSCNPRFPGGRFCPASKFECTNTICIPKEWRCDGNDDCG-----DKSDEE-DAV 2896
Query: 333 FSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---------------- 375
S+ + C P RC +N+C+ + CD +C +G DE
Sbjct: 2897 CSN--IPCDPKTRFRC-QNNRCIPRWRLCDKVDNCGDGSDENNLDLCGEKFGHCNASQFK 2953
Query: 376 ------------CNNKADC--------------------ENLKCSHKCSPTP-RGAMCFC 402
C++ DC +N C H C+ G +C C
Sbjct: 2954 CANKRCINATGVCDSVDDCGDHSDELGCHKTSGHVNCSVDNGGCDHNCTDLKGSGYLCSC 3013
Query: 403 PAGQ--NPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNV 458
G + NK C D DEC+ G+ C C N S+ C C G++ ++ G C A +
Sbjct: 3014 KPGYQISSNKKTCEDVDECVTWGNQCPHMCHNVKGSFKCMCYAGFSDVKGKGTVCKAEGM 3073
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
++ F++ +IR+I L+
Sbjct: 3074 -----TTVFFTTGHEIRQIILD 3090
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 26/234 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C P RC ++ +C+ CD DC +G DE +CT QF C +CI ++
Sbjct: 1770 VCDPTFFRC-NNGRCIQPQYRCDYDDDCKDGSDEMDCDYPKCTDKQFECKNFRCISKNLV 1828
Query: 224 CDGFVDCLE-DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C + + +DE C G+ +C S KC+ +LCD + DC N+DE
Sbjct: 1829 CNGEDNCRDGNKTDEIQCPDRPCEKGKTKCPNSNKCLARRYLCDGDDDCGD-----NSDE 1883
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + K C +G +C ++ KCIP NW CD + DC + DE + ++N C
Sbjct: 1884 NPLFCKSVACTDGYYECKITHKCIPMNWYCDGDDDCGMGE-----DEMPNCKKTNNT--C 1936
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
N+ C +S +C++ CDG DC + DE P LKC + P
Sbjct: 1937 SSNQFTC-ASGRCISKRWVCDGDDDCMDNSDEAP---------ELKCVERACPA 1980
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 104/233 (44%), Gaps = 43/233 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVLCH 166
+E A G NR ++ + P I +D +YW D + +VE R G+++ VL H
Sbjct: 2406 IEYANTDGTNRHIVMQGKV--PHPFAITLFEDFMYWTDWNHKSVEKANRFTGANHTVLQH 2463
Query: 167 ----PNELR-------------CGSSNQCVALSKFCDGKPDCSNGEDEGP---------- 199
P ++ CG++N S C P N P
Sbjct: 2464 VTHRPMDIHIYHPLQQPKGINPCGNNNG--GCSHLCLIGPGGKNYTCNCPNDFLLSVDLK 2521
Query: 200 FCNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSK 256
C A C+ QF CG+ +CIP+ WKCDG DCL D SDEP C + C GQ QC +K
Sbjct: 2522 TCVANCSRSQFRCGITDDRCIPKIWKCDGEKDCL-DNSDEPEDCPANHCAPGQFQCK-NK 2579
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
C +CD DC DN+DE+ + QC + Q +C + KCIP W+
Sbjct: 2580 NCTYAFSVCDLHDDCG-----DNSDEENCENRQCEHFQFKCG-NNKCIPQGWV 2626
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 117/312 (37%), Gaps = 85/312 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW-- 222
C P + +C + N A S CD DC + DE N +C QF CG KCIP+ W
Sbjct: 2569 CAPGQFQCKNKNCTYAFS-VCDLHDDCGDNSDEENCENRQCEHFQFKCGNNKCIPQGWVC 2627
Query: 223 --------------------KCDGFVDCLEDG---------------------SDEPNTC 241
CD ++G E N
Sbjct: 2628 DGDDDCGDNSEEDSSICGNRTCDSHQFTCDNGKCIPSSWHCDYDDDCGDGSDEKKEWNCE 2687
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF-NGQVQCALS 300
+C G +C + +CIP+ CD DC DN+DE+ C G QCA +
Sbjct: 2688 ARKCVEGWWKCKTNYRCIPNWQRCDGRDDCR-----DNSDENEADCPTCHPTGDWQCA-N 2741
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
K+CIP WLCD + DC D +DED K ++ C +E RC + +C+ C
Sbjct: 2742 KRCIPKRWLCDFDSDCD-----DKSDED-PKLCANLYRNCSESEFRC-DNQKCIRGKWRC 2794
Query: 361 DGKPDCSNGEDEGP--------------------------FCNNKADCENLKCSHKCSPT 394
D DC + DE P C+ + +C+++ C+P
Sbjct: 2795 DHDNDCGDNSDEDPVYCKKYHQCEGDQFQCASGHCISNKTLCDGRRNCQDMSDEKSCNPR 2854
Query: 395 PRGAMCFCPAGQ 406
G FCPA +
Sbjct: 2855 FPGGR-FCPASK 2865
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 130/313 (41%), Gaps = 83/313 (26%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL-- 164
++E++ M G R +V ++ WP+ L IDY++D++YW D+ + +E +G + ++
Sbjct: 1559 KIERSTMAGNLRKTIVKTDLGWPNGLSIDYDEDMIYWADALRDRIERANFNGQYREIIVQ 1618
Query: 165 --CHPNELRC-------------------------------GSSNQCVALSKFCDGKPDC 191
HP + G N+ + ++ F + C
Sbjct: 1619 STVHPYSMTVFGHYVYWTDWTLHGVYRAEKHTGANMVVMVEGILNRPMGITVFSPRRQKC 1678
Query: 192 SNGEDEGPF---CNAECTP---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
N + PF C+ C P GQ C KC PE+ DG L +G H C
Sbjct: 1679 DN-DPCTPFNGGCSHSCHPAPDGQAEC---KC-PET---DGVTYKLGNGGKMCVPSNHTC 1730
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---------KFHQCFNGQVQ 296
+ + C+ + +C+ + W+CD + DCS D DE+ + F +C NG
Sbjct: 1731 KSNRFVCS-NGQCLSYKWVCDSDPDCS-----DGFDENQNMCATHVCDPTFFRCNNG--- 1781
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
+CI + CD + DC D D D D+ K C + C + +C++
Sbjct: 1782 -----RCIQPQYRCDYDDDCK--DGSDEMDCDYPK--------CTDKQFEC-KNFRCISK 1825
Query: 357 SKFCDGKPDCSNG 369
+ C+G+ +C +G
Sbjct: 1826 NLVCNGEDNCRDG 1838
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 134/357 (37%), Gaps = 79/357 (22%)
Query: 34 DDIVDNTDEDWDKYFKRILNGTHT-------------LALEFNHRNQSLCFIQQQNVSSV 80
+D + TD K ++ LNGT+ LA+++ R ++Q++
Sbjct: 2262 EDRMYFTDVRAKKMYRMHLNGTNKEVIVRHSMLGAEGLAVDWIGRKVYWVDSRKQSIYVT 2321
Query: 81 RLRCAQINDLLNSWDLPAPEIFPLDERLEKA--------------GMHGENRSPLVTKNI 126
+ L + P F +D A GM+G N S ++T +
Sbjct: 2322 EMNGTSRLTLFKGGFMKNPRAFVVDPIRGYAYWTDWAVTPYIGCIGMNGINASKVITNKL 2381
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD 186
WP++L +D L+W D+HL+ +E DG++ ++ G A++ F D
Sbjct: 2382 GWPNALAVDIVNGRLWWGDAHLDYIEYANTDGTNRHIVMQ------GKVPHPFAITLFED 2435
Query: 187 GKP----DCSNGEDEGPFCNAECT----------------PGQFSCGMGKCIPESWKCDG 226
+ + E F A T P Q G+ C + C
Sbjct: 2436 FMYWTDWNHKSVEKANRFTGANHTVLQHVTHRPMDIHIYHPLQQPKGINPCGNNNGGCSH 2495
Query: 227 FVDCLEDGSDE----PN---------TCIHQCFNGQVQCALS-KKCIPHNWLCDEEMDCS 272
G + PN TC+ C Q +C ++ +CIP W CD E DC
Sbjct: 2496 LCLIGPGGKNYTCNCPNDFLLSVDLKTCVANCSRSQFRCGITDDRCIPKIWKCDGEKDC- 2554
Query: 273 TDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DN+DE D + C GQ QC +K C +CD DC DN+DE+
Sbjct: 2555 ----LDNSDEPEDCPANHCAPGQFQCK-NKNCTYAFSVCDLHDDCG-----DNSDEE 2601
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C +G +C ++ KCIP NW CD + DC ED K+ N +
Sbjct: 1893 CTDGYYECKITHKCIPMNWYCDGDDDCG-------MGEDEMPNCKKTNNTCSS------- 1938
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
NQ C S R C +D +++ D APE+ + ER A + L +
Sbjct: 1939 -NQFTC--ASGRCISKRWVCDGDDDCMDNSD-EAPELKCV-ERACPADTFTCESNKLSGR 1993
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
LV D ++ + D +N C P E +C +
Sbjct: 1994 YSCIDKRLVCDGVKNCVKGEDEMMNCTSRT----------CQPGEFQCTNDFH------- 2036
Query: 185 CDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
CD DC +G DE C C G+F C +CI ES+ CDG DC D SDE N C H
Sbjct: 2037 CDHVDDCGDGSDETEACKYPPCNEGKFECDNKRCIAESFVCDGDNDCT-DKSDEKN-CTH 2094
Query: 244 ---QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+C NG+ QC + KCI + +C++E DC
Sbjct: 2095 TENKCPNGEFQCK-NGKCIDYKLVCNKEYDC 2124
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCA 253
+DE F +C G F+C +C+P ++ CD DCL D SDE N T C QC
Sbjct: 173 QDEEVFKEEKCRAGFFTCDNKRCVPNTFTCDQENDCL-DKSDEKNCTEGKTCGPQHFQCN 231
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI W CD + DC D++DE C Q +C + CI + CD +
Sbjct: 232 -NNRCIDLKWKCDGDNDCG-----DSSDEIGCSNKTCGPTQFRCN-NTLCINMRFKCDTD 284
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE + +H C + +CG +C+ K CDG+ DC +G DE
Sbjct: 285 NDCG-----DGSDEG-EFCGTHT---CDVDHFQCGDK-RCIYTRKLCDGQEDCYDGSDE- 333
Query: 374 PFCNNKADCENLKCS 388
DC L+C+
Sbjct: 334 ------KDCPPLQCA 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 134/343 (39%), Gaps = 82/343 (23%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVI--------DYNQDILYWCDSHLNTVESVR 155
L +R+E+A +G+ R +V + P S+ + D+ +Y + H V
Sbjct: 1599 LRDRIERANFNGQYREIIVQSTVH-PYSMTVFGHYVYWTDWTLHGVYRAEKHTGANMVVM 1657
Query: 156 VDGSHN----AVLCHPNELRCGSSNQCVALSKFC--------DGKPDCSNGEDEG----- 198
V+G N + P +C ++ C + C DG+ +C E +G
Sbjct: 1658 VEGILNRPMGITVFSPRRQKC-DNDPCTPFNGGCSHSCHPAPDGQAECKCPETDGVTYKL 1716
Query: 199 ----PFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQV 250
C N C +F C G+C+ W CD DC + + N C H C
Sbjct: 1717 GNGGKMCVPSNHTCKSNRFVCSNGQCLSYKWVCDSDPDCSDGFDENQNMCATHVCDPTFF 1776
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
+C + +CI + CD + DC D +DE + +C + Q +C + +CI N +C
Sbjct: 1777 RCN-NGRCIQPQYRCDYDDDCK-----DGSDEMDCDYPKCTDKQFECK-NFRCISKNLVC 1829
Query: 311 DEEMDC----STDDI---------------------------------VDNTDEDWDKYF 333
+ E +C TD+I DN+DE+
Sbjct: 1830 NGEDNCRDGNKTDEIQCPDRPCEKGKTKCPNSNKCLARRYLCDGDDDCGDNSDEN---PL 1886
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+V C C +++C+ ++ +CDG DC GEDE P C
Sbjct: 1887 FCKSVACTDGYYECKITHKCIPMNWYCDGDDDCGMGEDEMPNC 1929
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVID-YNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A M+GE+R LV+ + P+ L ID + D ++WCDS N +ES+ DGS ++
Sbjct: 3219 KIERAWMNGEHREELVSTRLGRPTGLAIDDHMNDRVFWCDSKENLIESMNADGSDRVIV 3277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
++E++GM G R ++++N+ WP+ L +DY LY+ D+ L+ +E DGS
Sbjct: 733 KIERSGMDGIGRKVIISENLYWPNGLTLDYPNRRLYFTDARLDFIEFCNYDGSGRRKVFA 792
Query: 160 HNAVLCHPNEL 170
++ L HP++L
Sbjct: 793 NDHFLRHPHDL 803
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 21/113 (18%)
Query: 162 AVLCHPNELRC--------GSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSC 212
++ C P +C G+S C+ +K CDG DC NG+DE P CN EC C
Sbjct: 458 SLTCPPPTFKCPHYQWECPGNSRVCINRTKVCDGNADCPNGDDESPICNTDECGVENGHC 517
Query: 213 GM--------GKCI-PESWKCDGFVDCLEDGS-DEPNTCIHQCFN--GQVQCA 253
+C+ P +G +C++D D P C C N G +C
Sbjct: 518 NFLCIQTPRGAECVCPVGQVLNGTKECVDDNECDPPGKCSQHCINTKGSFKCT 570
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + G NR+ LV I +P + ID +YW DS ++ ++ + G + +
Sbjct: 1388 KIERSHLDGSNRTVLVKHGIIYPRGITIDITTHEVYWVDSRVDAIQKMSFSGGNRKYV 1445
>gi|321459730|gb|EFX70780.1| hypothetical protein DAPPUDRAFT_327801 [Daphnia pulex]
Length = 1830
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 153/375 (40%), Gaps = 72/375 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C + RC ++ C+ CDG PDC G DE C P Q CG G C+P
Sbjct: 72 CTASSFRCPNNGNCIPQVWVCDGDPDCDGGADERDCSVLLTRTCPPSQHRCGNGACLPAE 131
Query: 222 WKCDGFVDCLEDGSDEPN-----------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
W+CDG DC D SDE C + QCA S CI + CD E+
Sbjct: 132 WRCDGDPDC-SDMSDETGCQQSGDGGADGAVDRDCGADEFQCA-SGHCIKGAYRCDGEIH 189
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D+ D D +C G +C +CI W CD E DC VD + D
Sbjct: 190 CR--DVSDELDCG-SLLPRCVEGDFRCP-DGQCIAQAWRCDGEQDCEPG--VDEENCDSS 243
Query: 331 KYFSHNAVLCHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDE-------------- 372
C PN++ C SS C++ S CDG+ DC +G+DE
Sbjct: 244 TVAGGATHTCGPNQMACSSSTGKNGPCISTSWVCDGETDCPDGQDEQNCPANHCGKDQFS 303
Query: 373 ---------GPFCNNKADC----------------ENLKCSHKCSPTPRG-AMCFCPAG- 405
CN + DC +C H C G C C +G
Sbjct: 304 CSNDTCVGFSRVCNGERDCPGGEDEFDCTIQKECDAGSRCQHTCLVLSNGTGACGCRSGF 363
Query: 406 -QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ CVD DEC + C Q CTNT + CSC +GY LRPD SC A+ +P
Sbjct: 364 RLTSDGVNCVDVDECATETYCSQLCTNTVGGFSCSCVDGYVLRPDKSSCKALG----QPV 419
Query: 465 SIIFSSTVDIRRIHL 479
+IF++ VDIR++ L
Sbjct: 420 RLIFANRVDIRQVSL 434
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
R+E++ M G NR LVT+N+ WP+ L IDY D +YW D+ + +ESVR+DG+
Sbjct: 557 RIERSDMDGSNRQILVTENLVWPNGLTIDYTVDHIYWADAKHHVIESVRLDGT 609
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN----A 162
R+E+A M G NR +V+ ++ WP+SL IDY ++LYW D+ T+ES + G H
Sbjct: 1175 RIEQADMDGRNRKVMVSTDLGWPNSLTIDYAANMLYWTDARKKTIESCDLSGLHRREVLT 1234
Query: 163 VLCHP 167
L HP
Sbjct: 1235 GLSHP 1239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G RS +V N+ WP+ L ID+ + LYW D +E +DG + VL
Sbjct: 864 KIERAGMDGSQRSVIVISNLTWPNGLAIDHEGERLYWADGGTKAIEYASLDGKNRTVL 921
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++E++ + G +R +VT + WP+ L IDY LYW D+ L+ +E+ + G L
Sbjct: 1481 KIERSFLDGSHRVAIVTSELGWPNGLAIDYEGQRLYWADAQLDRIETSDLSGRFRVQLVQ 1540
Query: 166 ---HPNEL 170
HP L
Sbjct: 1541 GATHPFGL 1548
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD + IF D + + +A +G N+ LV +++ P+ L +D+ LYW D+ N
Sbjct: 761 WDGASQTIFWTDVESDVINRAFWNGSNQQTLVANDLESPAGLAVDWVTKKLYWTDAGTNR 820
Query: 151 VESVRVDGSHNAVL 164
+E +DG+ ++L
Sbjct: 821 IEVSNLDGTLRSLL 834
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 79/194 (40%), Gaps = 20/194 (10%)
Query: 190 DCSNGEDEG----PFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DC G+DE C+ C G +CI W CDG DC ++ +
Sbjct: 12 DCDRGQDESECGETVCHGIRCRSGSAGHPTPRCIQPDWLCDGDDDCGDNSDEIHCEASRN 71
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C +C + CIP W+CD + DC D D D C Q +C + C+
Sbjct: 72 CTASSFRCPNNGNCIPQVWVCDGDPDC--DGGADERDCSVLLTRTCPPSQHRCG-NGACL 128
Query: 305 PHNWLCDEEMDCSTDDIVDNT------DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
P W CD + DCS D+ D T D D + C +E +C +S C+ +
Sbjct: 129 PAEWRCDGDPDCS--DMSDETGCQQSGDGGADGAVDRD---CGADEFQC-ASGHCIKGAY 182
Query: 359 FCDGKPDCSNGEDE 372
CDG+ C + DE
Sbjct: 183 RCDGEIHCRDVSDE 196
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
N LV+ N+ P L +D+ D LYW D+ N +E+ R+DG++ ++
Sbjct: 1404 NVETLVSSNLTTPDGLAVDWLADNLYWTDAGRNVLEASRLDGTNRKII 1451
>gi|351704735|gb|EHB07654.1| Prolow-density lipoprotein receptor-related protein 1 [Heterocephalus
glaber]
Length = 4544
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/318 (34%), Positives = 152/318 (47%), Gaps = 34/318 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 991 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 1049
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1050 ETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWHCDGDTDC-----MDSSDEKSCEGV 1104
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1105 THVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPPSH 1154
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+A K CDG DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1155 PCANNTSVCLAPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1213
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G + C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1214 LGMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1272
Query: 462 EPASIIFSSTVDIRRIHL 479
IIFS+ +IRRI L
Sbjct: 1273 --PFIIFSNRHEIRRIDL 1288
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 26 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 80
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C +++C L C H C PT G C+C
Sbjct: 81 HNCLGTELCVPMSRLCNGVQDCVDGSDEGPHCRELQSNCSQLGCQHHCVPTLSGPTCYCN 140
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 141 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 199
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 200 DRPPVLLIANSQNILATYLSGA 221
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 163/338 (48%), Gaps = 28/338 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2730 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2788
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE + C++ C + + C + +CIP +++CD + D
Sbjct: 2789 HMCVPERWLCDGDKDC-ADGADESISAGCLYNSTCDDREFMCQ-NHQCIPKHFVCDHDRD 2846
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 328
C+ D +DE + ++ C + + +CA + W CD E DC D +DE
Sbjct: 2847 CA-----DGSDESPECEYPTCGSSEFRCANGRCLSSRQWECDGENDCH-----DQSDEAP 2896
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-C 387
+ + + C+ + SS +CVA C+G+ DC +G DE N+ L C
Sbjct: 2897 RNPHCTSPEHKCNASSQFLCSSGRCVAEVLLCNGQDDCGDGSDERSCHVNECLSRKLSGC 2956
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
S C G C C G + C D DEC C Q C NTH SY C C EGY
Sbjct: 2957 SQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYA 3016
Query: 446 LR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3017 PRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3051
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 131/482 (27%), Positives = 195/482 (40%), Gaps = 74/482 (15%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q QC+++K+CIP W+CD + DC VD +DE + ++ G EF
Sbjct: 3457 CAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEPAN--CTQMTCGVD----EFRC 3505
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
++ C R +C +D + D P E P+ L H N P ++
Sbjct: 3506 KDSGRCI-------PARWKCDGEDDCGDGSDEPKEECDPV---LILVVFHPPN-PPTMSA 3554
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
+ + + V V H C +E C ++ +C+A
Sbjct: 3555 RRAAAGTFALSW-----------------VSV---HAPRPCSESEFSC-ANGRCIAGRWK 3593
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCI 242
CDG DC++G DE C C QF C G CIP W+CD DC+ DGSDE T +
Sbjct: 3594 CDGDHDCADGSDEKD-CTPRCDMDQFQCKSGHCIPLRWRCDADADCM-DGSDEEACGTGV 3651
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
C + QC + C P W CD E DC D D E+ +F N +C +
Sbjct: 3652 RTCPLDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPEECARFVCPPNRPFRCKNDRV 3708
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+ CD TD+ D TDE+ + + A C + + C++ S C+
Sbjct: 3709 CLWIGRQCD-----GTDNCGDGTDEEDCEPPTAQAAHCKDKKEFLCRNQHCLSSSLRCNM 3763
Query: 363 KPDCSNGEDE---------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKT 411
DC +G DE N + C + +C T + A C C G + P +
Sbjct: 3764 FDDCGDGSDEEDCSIDPKLTSCATNASICGD---EARCVRTEKAAYCACRPGFHTVPGQP 3820
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVPQDEPASI 466
C D +ECL G+C Q C NT ++CSC + T + +G + + D
Sbjct: 3821 GCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEIRS 3880
Query: 467 IF 468
+F
Sbjct: 3881 LF 3882
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 899 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 957
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 958 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1011
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1012 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1067
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C C+ L CDG DC + DE CE + +H C P
Sbjct: 1068 TDEFQCRLDGLCIPLRWHCDGDTDCMDSSDE-------KSCEGV--THVCDP 1110
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 100/198 (50%), Gaps = 16/198 (8%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
++C+ CD + DC + DE C +C PGQF C G C ++ CDG DC +D
Sbjct: 3348 DKCIPFWWKCDTEDDCGDHSDEPADCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QDN 3406
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE N IH C Q +C + +CIP + C+ + +C D DE C Q
Sbjct: 3407 SDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPNQ 3461
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C+
Sbjct: 3462 FQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRCI 3512
Query: 355 ALSKFCDGKPDCSNGEDE 372
CDG+ DC +G DE
Sbjct: 3513 PARWKCDGEDDCGDGSDE 3530
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 104/248 (41%), Gaps = 58/248 (23%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3416 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 3475
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D +D
Sbjct: 3476 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG-----DGSD 3529
Query: 282 E----------------------------------DWDKFHQ---CFNGQVQCALSKKCI 304
E W H C + CA + +CI
Sbjct: 3530 EPKEECDPVLILVVFHPPNPPTMSARRAAAGTFALSWVSVHAPRPCSESEFSCA-NGRCI 3588
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
W CD + DC+ D +DE C ++ +C S C+ L CD
Sbjct: 3589 AGRWKCDGDHDCA-----DGSDE------KDCTPRCDMDQFQC-KSGHCIPLRWRCDADA 3636
Query: 365 DCSNGEDE 372
DC +G DE
Sbjct: 3637 DCMDGSDE 3644
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 96/214 (44%), Gaps = 25/214 (11%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED S
Sbjct: 2580 GRCVSNMLWCNGADDCGDGSDEIPCNKTACGAGEFRCRDGTCIGNSSRCNQFVDC-EDAS 2638
Query: 236 DEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DE N C F V+ C + C +W+CD DC D D D K
Sbjct: 2639 DEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPGVK 2696
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2697 RPKCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQFE 2744
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2745 C-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2777
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 709 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 767
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + G+ V +E +R + Q C +L G
Sbjct: 768 SVYRLERGAGGTPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 827
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 828 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 887
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 888 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 943
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 944 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 993
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 994 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1022
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 682 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 741
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 742 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGAGGTPPTVTLLRSERPPIFEIRM 798
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 799 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 856
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 857 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 907
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 908 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 958
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 959 CDLDDDCGDRSDESASC 975
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3174 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3230
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2036 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2090
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2362 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2418
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 31 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 90
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 91 PMSRLCNGVQDCV-DGSDEGPHC 112
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2533 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2591
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2592 ADDCG-----DGSDEIPCNKTACGAGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2645
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2646 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2689
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 351 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 408
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1410 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1462
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1463 YSARYDGSGHMEVLRGHEF 1481
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 73 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCVDGSDEGPHCR 113
>gi|334333079|ref|XP_001374466.2| PREDICTED: very low-density lipoprotein receptor-like [Monodelphis
domestica]
Length = 1189
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 170/366 (46%), Gaps = 65/366 (17%)
Query: 161 NAVLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C NE+ CG S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI
Sbjct: 451 NMRTCRINEISCGVRSTQCIPVSWKCDGENDCDSGEDEENCGNVTCSPEEFTCSSGRCIS 510
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIV 277
+++ C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ +
Sbjct: 511 KNFVCNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCSDQSDESL 568
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ +C ++QC S +CI W CD + DC D +DE + +
Sbjct: 569 EQCGRQPVPHEKCPASEIQCG-SGECIHMKWRCDGDPDCK-----DGSDE-----INCPS 617
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------- 374
C P++ C N C+ S+ C+G DC +G DE GP
Sbjct: 618 RTCRPDQFECEDGN-CIHGSRQCNGVRDCIDGTDEINCKNANQCSGPGKFKCRSGECIDI 676
Query: 375 --FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQC 413
CN + DC+ N CSH C G C C AG + ++ C
Sbjct: 677 SKVCNQQQDCKDWSDEPLKDCNVNECLVNNGGCSHICKDLIIGYECDCAAGFELIDRKTC 736
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC G C Q C N Y C C+ GY + C AV EP S+IF++ D
Sbjct: 737 GDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRD 792
Query: 474 IRRIHL 479
IR+I L
Sbjct: 793 IRKIGL 798
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/402 (28%), Positives = 167/402 (41%), Gaps = 101/402 (25%)
Query: 140 ILYWCDS-HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
+ WC S L+TVE R C ++ +C S+ +C+ L CDG DCS+G DE
Sbjct: 356 VAMWCLSGELSTVEGTRTK-------CESSQFQC-SNGRCITLLWKCDGDEDCSDGSDES 407
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-S 255
C F C G+C+P W+CDG DC EDGSDE P C + C ++ C + S
Sbjct: 408 SCVKKTCAESDFVCNNGQCVPNRWQCDGDPDC-EDGSDERPEQCNMRTCRINEISCGVRS 466
Query: 256 KKCIPHNWLCDEEMDCST----------------------------------DDIVDNTD 281
+CIP +W CD E DC + DD D +D
Sbjct: 467 TQCIPVSWKCDGENDCDSGEDEENCGNVTCSPEEFTCSSGRCISKNFVCNGQDDCSDGSD 526
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--L 339
E C + QC+ S CIP +W+CD++ DCS D +DE ++
Sbjct: 527 ELDCAPPTCGTHEFQCSTS-SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVPHEK 580
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KC 391
C +E++CG S +C+ + CDG PDC +G DE C ++ +CE+ C H +C
Sbjct: 581 CPASEIQCG-SGECIHMKWRCDGDPDCKDGSDEINCPSRTCRPDQFECEDGNCIHGSRQC 639
Query: 392 SPT------------PRGAMCFCPAGQNPNKTQCVD-----------------------A 416
+ C P +C+D
Sbjct: 640 NGVRDCIDGTDEINCKNANQCSGPGKFKCRSGECIDISKVCNQQQDCKDWSDEPLKDCNV 699
Query: 417 DECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ECL+ +G C C + + Y C C G+ L D K+C ++
Sbjct: 700 NECLVNNGGCSHICKDLIIGYECDCAAGFEL-IDRKTCGDID 740
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++N + + +S L + L NS DL P +D
Sbjct: 861 AIAVDWVYKNIYWTDVASKTISVATLDGTKRKILFNS-DLREPASIAVDPLSGFVYWSDW 919
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R PLVT +IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 920 GEPAKIEKAGMNGFDRRPLVTIDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRR 979
Query: 163 VLCHPNEL 170
++ E
Sbjct: 980 IVLKSLEF 987
>gi|119617396|gb|EAW96990.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor), isoform CRA_a [Homo sapiens]
Length = 2641
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 34/319 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 987 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 1045
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1046 ETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGV 1100
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1101 THVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPPSH 1150
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1151 PCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1209
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1210 LGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1268
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1269 --PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDA 797
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C G C+ ED+ G C A +C PG
Sbjct: 798 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPG 857
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 858 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 916
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 917 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 967
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 968 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 1011
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 1012 SHSCSST 1018
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPN 239
SDE N
Sbjct: 2633 ASDEMN 2638
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G + V+
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVL 2091
Query: 166 HPNEL 170
N +
Sbjct: 2092 SSNNM 2096
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 5/106 (4%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPGQFSCGMGKCIPESWKCD 225
+E C ++ +C+ S CDG P C + DE P +CN+ C C G+C+ C+
Sbjct: 2528 DEFEC-ANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCVSNMLWCN 2586
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G DC DGSDE C G+ +C CI ++ C++ +DC
Sbjct: 2587 GADDC-GDGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDC 2630
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
>gi|308463167|ref|XP_003093860.1| CRE-LRP-1 protein [Caenorhabditis remanei]
gi|308248901|gb|EFO92853.1| CRE-LRP-1 protein [Caenorhabditis remanei]
Length = 4438
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/303 (35%), Positives = 150/303 (49%), Gaps = 20/303 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ C ++ +C+ + CDG DC +G DE +C+ QF C G+ C+P
Sbjct: 877 CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSALQFRCANGRQCVPLR 935
Query: 222 WKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + + C + Q +C S CIP +W CD + DC DD D
Sbjct: 936 NHCDGQNDC-EDGSDEDSCAVSTETCTSEQFKCQSSGLCIPASWKCDGQQDC--DDGSDE 992
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNA 337
QC Q +C + +CI +NWLCD E DC D +DE ++ NA
Sbjct: 993 PKFGCTSGRQCKADQFKCG-NGRCILNNWLCDGENDCG-----DGSDESAERGCKTPMNA 1046
Query: 338 VLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + C ++ + C+ L + CDGK C G DEG C + C+ KC +P
Sbjct: 1047 RKCPFEHVACENNPEVCIPLHQLCDGKRHCPGGTDEGGRCARDLCSADRAGCAFKCHNSP 1106
Query: 396 RGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G +C CP+G Q NKT+C +ECL SC Q C + + CSC EGY L + ++C
Sbjct: 1107 NGPICSCPSGEQLVNKTKCEPENECLDASSCSQRCKDEKHGFTCSCDEGYELDANKRTCK 1166
Query: 455 AVN 457
N
Sbjct: 1167 VTN 1169
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 150/323 (46%), Gaps = 33/323 (10%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCIPESWKCD 225
+C++ + CDG+ DC +G DE N CT +F C +CIP +W CD
Sbjct: 2708 KCISRAFICDGEDDCGDGSDEHTRHGCGNRTCTDQEFHCASNAKLAQPKYECIPRAWLCD 2767
Query: 226 GFVDCL---EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
G V C ++ +D T +C G+ +C+ ++ CI +W CD + DC +D +DE
Sbjct: 2768 GDVTCAGGEDESTDLCKTEKKECNKGEFRCS-NQHCIHASWECDGDNDC-----LDGSDE 2821
Query: 283 DWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ + C QCA + KC+P++W CD DC +D D + + + C
Sbjct: 2822 HANCTYSSCQPDFWQCA-NHKCVPNSWRCDGNDDC--EDGSDEKECPKNSAAGQKSSKCS 2878
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NNKADCENLKCSHKCSPTPRGAM 399
++ +C +S +C+ +K CD DCS+ DE C + + E C KC G
Sbjct: 2879 KSQFQC-TSGECIDDAKVCDRNFDCSDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYK 2937
Query: 400 CFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
C C G + Q E + C Q C + SY C+C +GY L D SC V++
Sbjct: 2938 CDCYEGFFQSFQQSYVFPEGI--SGCSQKCDDKIGSYKCACVDGYQLSSDDHSCKRVDL- 2994
Query: 460 QDEPAS-IIFSSTVDIRRIHLNG 481
EP + ++ IR+I ++G
Sbjct: 2995 --EPTPFFLLANKHYIRKISMDG 3015
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 151/341 (44%), Gaps = 41/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE C PG C G CI E C
Sbjct: 3562 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCMPGHRQCDDGTCIAEHKWC 3620
Query: 225 DGFVDCLEDGSDEP---NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +C+ S CIP ++CD + DC DN+D
Sbjct: 3621 DRKKDC-ANAADEMHCDDVSRRTCSPFEFECSNSV-CIPRKFMCDGDNDCG-----DNSD 3673
Query: 282 EDWDKFHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E +C + Q +CA S+ C+ LC+ DC +D+ D + +
Sbjct: 3674 E---TSTECRSAQCDPPLRFRCAHSRLCLNILQLCNGVNDCGQNDLSDEHLSMCSSFSEY 3730
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN--KADCE----NLKCSH 389
C ++ +C ++ +CV + CD K DC + DE + K CE N C H
Sbjct: 3731 GD--CTSDQFKC-ANGRCVNGTLACDRKDDCGDASDEIGCSKHGGKTSCESFGNNGGCKH 3787
Query: 390 KCSPTPRGAMCFCPAGQNPNKTQ---CVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-- 444
C+ C C G P+ C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 3788 ICTDITDSFYCHCRDGFRPDPQSPKDCIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYEN 3847
Query: 445 ---TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+G+
Sbjct: 3848 NVVVGSMTGKDCRA----KGDAANVMIGADSSLVQLSLHGA 3884
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 108/223 (48%), Gaps = 30/223 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC----NAECTPGQFSCGMGKCIP 219
C N ++C ++ +C+ CDG DC + DE +C C +F C +CIP
Sbjct: 791 CAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIP 850
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTD 274
E WKCD DC DGSDE I C N Q CA + +CIP WLCD + DC
Sbjct: 851 EQWKCDSDNDC-GDGSDEK---IELCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC--- 902
Query: 275 DIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D TDED ++ QC Q +CA ++C+P CD + DC D +DED
Sbjct: 903 --YDGTDEDKERCPPVQCSALQFRCANGRQCVPLRNHCDGQNDCE-----DGSDED---S 952
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+ + C + +C SS C+ S CDG+ DC +G DE F
Sbjct: 953 CAVSTETCTSEQFKCQSSGLCIPASWKCDGQQDCDDGSDEPKF 995
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 95/193 (49%), Gaps = 36/193 (18%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 750 QFQCKNGRCIPKEWKCDGENDCL-DESDEVDEKGEKCFHETECAENTIKCRNTKKCIPAQ 808
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK-------CIPHNWLCDEEMD 315
+ CD + DC D +DED C +GQ +KK CIP W CD + D
Sbjct: 809 YGCDGDNDCG-----DYSDED---VKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDND 860
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C D +DE + NA C N+ C ++ +C+ + CDG DC +G DE
Sbjct: 861 CG-----DGSDEKIE--LCGNAT-CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDE--- 908
Query: 376 CNNKADCENLKCS 388
+K C ++CS
Sbjct: 909 --DKERCPPVQCS 919
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/221 (35%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C P E +C N C+ S D K E F EC C KCIP +
Sbjct: 758 CIPKEWKCDGENDCLDESDEVDEK-------GEKCFHETECAENTIKCRNTKKCIPAQYG 810
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE + C +GQ +KK CIP W CD + DC
Sbjct: 811 CDGDNDC-GDYSDED---VKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCG---- 862
Query: 277 VDNTDEDWDKFHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE K C N Q CA + +CIP WLCD + DC D TDED ++
Sbjct: 863 -DGSDE---KIELCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDEDKER 912
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C + RC + QCV L CDG+ DC +G DE
Sbjct: 913 C---PPVQCSALQFRCANGRQCVPLRNHCDGQNDCEDGSDE 950
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----CNAECTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE + CT +F C KCI +
Sbjct: 3393 CDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSADRNCTAEEFRCNNNKCIAK 3452
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W+CD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3453 AWRCDNDDDCGDGSDETPECAQIECKKGWTRCSTSYRCIPNWAFCNGQDDCR-----DNS 3507
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE+ + C + G+ +CA + KCIP W+CD E DC DN+DE D +
Sbjct: 3508 DEEKQRCPSCDDVGEFRCATTGKCIPRRWMCDTENDCG-----DNSDE-LDATCGGTSRP 3561
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3562 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3593
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTP-GQFSCGMGKCIPESWKC 224
P +CG + C+ L CD KPDC + DE P +CN P G C +CI + KC
Sbjct: 2485 PYNFQCGDGS-CILLGATCDSKPDCPDASDENPNYCNTRACPDGYHLCTNRRCIDSAKKC 2543
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2544 NHIDDC-GDGSDELDCPSAVSCAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESLAT 2601
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +++C + CI LCD DC D DE ++ F N C
Sbjct: 2602 CPGLPIDCRGVKIRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2653
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2654 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2682
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 54/251 (21%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE--GPFCNAECTP-GQFSCGMGKCIPE 220
C + CG + +C+ +CDG+PDC +G DE C P G+F C C
Sbjct: 3311 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRP 3370
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW----------------- 263
CDG DC DGSDE N C C +CA + +CIP +
Sbjct: 3371 FQICDGNDDC-GDGSDEQN-CDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADT 3428
Query: 264 LC-DEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQCALSK 301
LC + +C+ ++ N + + W + +C G +C+ S
Sbjct: 3429 LCMSADRNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSTSY 3488
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP+ C+ + DC DN+DE+ + S + V E RC ++ +C+ CD
Sbjct: 3489 RCIPNWAFCNGQDDCR-----DNSDEEKQRCPSCDDV----GEFRCATTGKCIPRRWMCD 3539
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 3540 TENDCGDNSDE 3550
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC 265
P F CG G CI CD DC + + PN C C +G C +++CI C
Sbjct: 2485 PYNFQCGDGSCILLGATCDSKPDCPDASDENPNYCNTRACPDGYHLCT-NRRCIDSAKKC 2543
Query: 266 DEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC D +DE D C G C+ + CI +CD DC + + D
Sbjct: 2544 NHIDDCG-----DGSDELDCPSAVSCAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDE 2597
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ + C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2598 SLATCPGL----PIDCRGVKIRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMN 2648
Query: 385 LKCSHKCSPTPRG 397
+C+ P G
Sbjct: 2649 QQCAQHYVRCPSG 2661
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 21/140 (15%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L LL ++ P +D R
Sbjct: 1244 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPTKRTLLVHQNISQPRGIAVDPRKGLM 1303
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +D + +Y+ DS L+ ++ V D
Sbjct: 1304 FWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDLTTNRVYFADSKLDFIDFVNYD 1363
Query: 158 G-------SHNAVLCHPNEL 170
G S + + HP+ L
Sbjct: 1364 GTGRTQVLSSSKFVQHPHAL 1383
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G NR +V+++I P+++ +D+ ++YW D + +E +G + ++
Sbjct: 2291 RIERSNLAGGNRKVIVSESISLPAAITVDFRNQMIYWADVNRLNIEVADYNGENRKII 2348
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F ++E A M G NR LV+ + S +V+D +YW D ++ +ES+
Sbjct: 214 LRGEMFFTNQLKIEAAAMDGTNRRTLVSTHTHQVSGIVVDITAKRIYWVDPKVDRLESID 273
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 274 YQGNDRRIVAQ 284
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3160 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3197
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 393 PTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
P+P G C CP+G + C D +EC G CDQ C N + CSC
Sbjct: 3 PSPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSC 53
>gi|195024691|ref|XP_001985922.1| GH21081 [Drosophila grimshawi]
gi|193901922|gb|EDW00789.1| GH21081 [Drosophila grimshawi]
Length = 4620
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 116/218 (53%), Gaps = 20/218 (9%)
Query: 265 CDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD + DC D +DE D K +C GQ +C S+KCIP WLCD E DC D+
Sbjct: 5 CDSKPDCK-----DGSDESSDCVKSPKCIAGQFRCGQSQKCIPGYWLCDGEYDCGKGDVS 59
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D T+ A C E C + C+ LS+FCDG DC N DE C
Sbjct: 60 DETNCP-----DGVARKCSAFEAEC-HNGACLELSRFCDGHWDCDN--DELHCDKQNVAC 111
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS+ C TP+GA C+CPAGQ + N T+CVD DEC + G CDQ C NT SY C+
Sbjct: 112 AALNCSYNCKLTPQGARCYCPAGQVAESTNSTRCVDYDECTVPGICDQQCKNTPGSYECA 171
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C GYT + GK C +NVP EPA++ S IRRI
Sbjct: 172 CISGYTKQ--GKRCLGINVPPSEPATLSTLSMDTIRRI 207
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 155/331 (46%), Gaps = 24/331 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS--NGEDEGP--FCNAECTPGQFSCGMGKCIPE 220
C+ NE C S +C+ L+ DG DC +G DE F ++C +F CG G+C
Sbjct: 941 CNSNEFTCEKSGRCIQLTWVNDGVVDCGPDDGSDESSDVFFGSKCP--EFDCGNGRCRQF 998
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S CDG +C + +DE C H+C +G+ C C ++CD DC N
Sbjct: 999 SDICDGLDNC-GNNADE-FACEHECGHGERYCR-PIGCYGDMYICDGVNDCEDFSDEANC 1055
Query: 281 DE---------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWD 330
+E W + +C + CA +CIP CD C D V+ T +
Sbjct: 1056 NETKSDNKPLTGWKELGECAPFEFACADPFECIPEFLRCDGINHCFDKTDEVNCTKLNPT 1115
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
K+ + V+C + CG SN+C+ +S+ CDG DC + DEG C +K + +CSH
Sbjct: 1116 KFDMNETVICEEPDRLCGFSNKCITVSQLCDGHNDCEDTTDEGFLCADKLCDQGHECSHN 1175
Query: 391 CSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP G +C CP PN +C C +C Q C N SY C C EGY L
Sbjct: 1176 CHNTPEGYICSCPPHLYLQPNGKRCSMQHACEHWDTCAQVCENNGKSYACQCLEGYDLSY 1235
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
D +C + DEP +IF++ DIR I+L
Sbjct: 1236 DKFTCKS--TAPDEPY-VIFTNRQDIRGINL 1263
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 157/410 (38%), Gaps = 114/410 (27%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
C +S+ C+ S CDG+PDC +G DE G A C QF C G CI +W+CDG
Sbjct: 2640 CANSSLCIMPSFRCDGEPDCPDGTDEIGCGNLTRATCELDQFRCSNGHCIAGTWRCDGEN 2699
Query: 229 DCLED----GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC++D GSDE N C C Q +C CIP +W CD + DC D TDE
Sbjct: 2700 DCMDDVGDNGSDELN-CRSSCQVNQFRC--DNGCIPSSWQCDGKSDCD-----DGTDEGP 2751
Query: 285 D-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CH 341
C QC S +CIP W+CD E+DC ++ D ED + A + C
Sbjct: 2752 QCPNRPCRAHLFQCKSSGRCIPQKWVCDGELDCPSNG--DQGSEDEGPHCGGIAHIPDCQ 2809
Query: 342 PNELRCGSS---------------------------------------------NQCVAL 356
P C S C+
Sbjct: 2810 PPAFLCSSGLCIDSHYVCDGDEDCPSGDDEYEGCEPVYPLHACPGGVLMHQCQDGLCIFK 2869
Query: 357 SKFCDGKPDCSNGEDEGP---------------------------FCNNKADCENLK--- 386
++ CDGKPDC +G DE C+ + DC +
Sbjct: 2870 NQTCDGKPDCGDGSDELASLCAHTRACNGADDFRCKNGACISADLLCDRRNDCGDYSDEE 2929
Query: 387 ------------CSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTN 431
C H+C G C C G + C D DEC C Q C N
Sbjct: 2930 HCNVNECLIPDICEHECEDKVVGYKCLCRPGYRLLANSLRLCTDIDECDEHQPCSQICVN 2989
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
T+ SY C C +GY LR D +C A + + +IFS+ IR+++ G
Sbjct: 2990 TYGSYKCLCAKGYELR-DHHTCKATS---NVTMKLIFSNRYYIRQVNHTG 3035
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 165 CHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N+++C SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3408 CFENQMKCEASANSSAFCVDSVKRCDGVKDCPAGEDEAGCTPLVCKKDQFQCGNNRCMPY 3467
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC D SDE N C QC S +CIP W CD+E DC +
Sbjct: 3468 VWVCDGDTDC-PDKSDEANCEHVSCGPNDFQCN-SGRCIPLTWRCDDEEDCPNGE----- 3520
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ C + C + KCIP W CD E DC D +DE +
Sbjct: 3521 ----DEPPSCHTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3566
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ CDG+ C + DE
Sbjct: 3567 CQMRNCSESEFRCGTG-KCIKHDFRCDGEIHCDDSSDE 3603
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 133/337 (39%), Gaps = 62/337 (18%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL E+A G NR +V + + + D+L+W D L+
Sbjct: 2371 TLDLEQQQLYWADARLDKIERANYDGTNR--VVLAHTTPKHAFAMAVYGDLLFWTDWVLH 2428
Query: 150 TVESVRVDGSHNAVLCHPNELRCGS------------SNQCVALSKFCD----------G 187
V + + + R +NQC L+ C+
Sbjct: 2429 AVVRANKYTGTDVLFLREHVARPMGIIAVQNSSINCDANQCKILNGLCEDVCILSKNGLA 2488
Query: 188 KPDCSNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNT 240
C+ G +G C N C Q++C G+CIP CD CL DGSDE N
Sbjct: 2489 SCHCTQGVLAPDGRRCIAPVNTSCGKSQYNCHSGECIPLELTCDNVTHCL-DGSDELRNY 2547
Query: 241 C-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
C I QC + C + +CI + CD C D +DE +C Q +C
Sbjct: 2548 CVIRQCPDNYFMCQ-NHRCIAQDQTCDGVQQCG-----DGSDET-PLLCKCQPQQFRCG- 2599
Query: 300 SKKCIPHNWLCDEEMDCS----TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
S +CI +++CD DC + T E D F H C +S+ C+
Sbjct: 2600 SGECISRSYVCDNMRDCRDFSDEKNCTQRTCEQGDALFEH-----------CANSSLCIM 2648
Query: 356 LSKFCDGKPDCSNGEDE---GPFCNNKADCENLKCSH 389
S CDG+PDC +G DE G + + +CS+
Sbjct: 2649 PSFRCDGEPDCPDGTDEIGCGNLTRATCELDQFRCSN 2685
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C PN+ +C + N C+ CDG DC +G DE N C P F+CG GKCI W
Sbjct: 3608 ITCKPNQFKCAAFNTCINKQYQCDGDDDCPDGSDE---VNCTCPPDHFTCGNGKCIMSRW 3664
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC H C +CA + CI + LCD DC ++ D +
Sbjct: 3665 KCDGWDDCL-DGSDESYATCAHAHCHYNAFKCA-NLLCIRKSALCDGVNDCGKNE--DES 3720
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
D+ +C + Q QC + CI ++ CD + +C +D +DE
Sbjct: 3721 DQVCAALPKCRHDQFQCE-NDDCISKSFRCDGQYNC-----IDGSDE 3761
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 185 CDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG-KCIPESWKCDGFVDCLE-DGSDE--- 237
CD KPDC +G DE C + +C GQF CG KCIP W CDG DC + D SDE
Sbjct: 5 CDSKPDCKDGSDESSDCVKSPKCIAGQFRCGQSQKCIPGYWLCDGEYDCGKGDVSDETNC 64
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
P+ +C + +C + C+ + CD DC D++
Sbjct: 65 PDGVARKCSAFEAECH-NGACLELSRFCDGHWDCDNDEL 102
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 117/303 (38%), Gaps = 76/303 (25%)
Query: 100 EIFPLDER---LEKAGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+IF D R + + + G+N L+ + N+ I +D +YW D ++E
Sbjct: 3190 QIFWGDAREDTISVSDLDGKNTRLLLARSINPNLNLHHIFAIAVWEDRIYWSDWETKSIE 3249
Query: 153 SV-RVDGSHNAVLC----HPNELRCG---------SSNQCVAL--SKFCDGKPDCSNGED 196
+ DG + + L P +LR S N C+A S C P
Sbjct: 3250 YCNKYDGQNCSTLITTIHRPMDLRVYHPYRQQQPLSGNPCLAANCSTLCLLSP------- 3302
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
E P+ C P F +D+ TC C +C +
Sbjct: 3303 EAPYYKCAC-PNNFVL----------------------ADDGRTCRANCTAAHFECVNTY 3339
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
KCIP W CD + DC D +DE C GQ QC +KKC+ + +CD
Sbjct: 3340 KCIPFYWRCDTQDDCG-----DGSDEPESCPPFNCEPGQYQCG-NKKCVHPSNICDGLNQ 3393
Query: 316 CSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRC----GSSNQCVALSKFCDGKPDCSNGE 370
C D+TDE + DK+ C N+++C SS CV K CDG DC GE
Sbjct: 3394 CG-----DSTDELNCDKF------TCFENQMKCEASANSSAFCVDSVKRCDGVKDCPAGE 3442
Query: 371 DEG 373
DE
Sbjct: 3443 DEA 3445
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKC 258
+ CT G +CI CDGF DC +DGSDE N C Q + ++ + +C
Sbjct: 856 SNCTSGHQCRSTQQCIDGKDLCDGFEDC-DDGSDESNDAQGPCNPQTCDKKLHFVCNGRC 914
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
LC CS D +D+ + + C + + C S +CI W+ D +DC
Sbjct: 915 YQRALLCSSIAYCS-----DGSDQMNCEHNTCNSNEFTCEKSGRCIQLTWVNDGVVDCGP 969
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D D +DE D +F E CG+ +C S CDG +C N DE
Sbjct: 970 D---DGSDESSDVFFGSKC-----PEFDCGNG-RCRQFSDICDGLDNCGNNADE 1014
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL IDY LYW D T+E+ R++G V
Sbjct: 3963 LENGILVASLDGSNKKSLVERDVGWPISLSIDYPTGRLYWADYRKGTIETCRLNGKDRNV 4022
Query: 164 L 164
+
Sbjct: 4023 V 4023
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQ----WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
R+E+ M GE R L++ N Q WP+ L +DY Q +YW D+ +++ S + DGS +
Sbjct: 1393 RIERCSMSGEGRR-LISTNWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTKYDGSEHH 1451
Query: 163 VLCHPNEL 170
V+ E+
Sbjct: 1452 VVLRNMEM 1459
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+++A + G ++ +I+ P++L +D Q LYW D+ L+ +E DG++ VL H
Sbjct: 2346 IQRAYLTGYGVERIIRTDIKMPNALTLDLEQQQLYWADARLDKIERANYDGTNRVVLAH 2404
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
+C GQ +C S+KCIP WLCD E DC D+ D T+
Sbjct: 26 KCIAGQFRCGQSQKCIPGYWLCDGEYDCGKGDVSDETN 63
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 24/129 (18%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP-----APEIFPLDERL--- 108
LA E HRN++LC +Q+ + + + C +I+D +W LP +P ++ RL
Sbjct: 228 VLAYEVWHRNRTLCMLQK--MIDLVMHCQRIDDASVNWTLPVSAFNSPHQIFVELRLDWI 285
Query: 109 --------EKAGM-----HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
E GM + L+ + ++ PSSLV+D + L++ D ++
Sbjct: 286 SGNWYFLNEDDGMVFLCTNAVTYCRLILQQVEQPSSLVLDSTKGYLFYTDWS-PSLSRAL 344
Query: 156 VDGSHNAVL 164
+DGS+ L
Sbjct: 345 LDGSNRTTL 353
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ KAGM G ++ +N+ WP++L I + ++W D+ +T+ +DG + +L
Sbjct: 3158 IGKAGMDGSQPRMIIRENLGWPNALTISFETQQIFWGDAREDTISVSDLDGKNTRLL 3214
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 108 LEKAGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L +++WP SL +D +YWCD L T+E +++DG+ +
Sbjct: 674 IYSAWMDGTHKELLAKSTDGMSMRWPRSLDVDRRTKRIYWCDFKLGTIERMKLDGTGREL 733
Query: 164 L 164
L
Sbjct: 734 L 734
>gi|119617397|gb|EAW96991.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor), isoform CRA_b [Homo sapiens]
Length = 4485
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2667 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2725
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2726 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2783
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2784 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2831
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2832 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2887
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2888 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 2947
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2948 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 2988
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3477 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3535
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3536 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3586
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3587 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3634
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3635 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQR 3694
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3695 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3754
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3755 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3814
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3815 DDNEIRSLF 3823
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3284 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3342
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3343 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3397
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3398 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3448
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3449 IPARWKCDGEDDCGDGSDE 3467
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 27/200 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N C +G +CIP +W CD+E DC + + +KF C
Sbjct: 2633 ASDEMNCSDFACPSG--------RCIPMSWTCDKEDDCEHGE----DETHCNKF--CSEA 2678
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQ 352
Q +C + +CI WLCD +DD D +DE +H C P+ C ++
Sbjct: 2679 QFECQ-NHRCISKQWLCD-----GSDDCGDGSDE-----AAHCEGKTCGPSSFSCPGTHV 2727
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV CDG DC++G DE
Sbjct: 2728 CVPERWLCDGDKDCADGADE 2747
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3966 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4022
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3111 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3167
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|391335881|ref|XP_003742315.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Metaseiulus occidentalis]
Length = 1807
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 144/308 (46%), Gaps = 32/308 (10%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ +C+G DC + DE C+ +F C G+CIP W+CDGF DC D SDE
Sbjct: 78 CIPKDHWCNGVNDCGDHSDETDCLARNCSLSEFECANGRCIPPLWQCDGFDDC-GDHSDE 136
Query: 238 PNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
C H C G+ +C CI +W CD + DCS D +DE + +C Q
Sbjct: 137 --QCPHDTDCQEGEFRCEKDGTCINLDWRCDGDSDCS-----DESDERQCERPECSMNQF 189
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC + +CI W CD + DC D +DE Y C + RC C++
Sbjct: 190 QCN-NGRCIQKEWKCDGDFDCQ-----DMSDEQDCGYIG-----CTAGQFRC-LDGTCIS 237
Query: 356 LSKFCDGKPDCSNGEDEGP--FCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN--PN 409
CDG+P C + DE C + C EN+ C H+C T G C C G +
Sbjct: 238 EKSVCDGEPHCPDRSDESANTTCRSTKPCREENVPCQHQCIATATGHRCACREGYQLAGD 297
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C+D DEC I G C CTNT Y C+C+ GY LR D + C A Q A I+F+
Sbjct: 298 LRSCLDIDECRILGMCSHNCTNTVPGYQCTCSRGYKLRDDHRHCKA----QGPEAFILFA 353
Query: 470 STVDIRRI 477
DIRR+
Sbjct: 354 HCTDIRRL 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E RC C+ L CDG DCS+ DE EC+ QF C G+CI + WKC
Sbjct: 144 CQEGEFRCEKDGTCINLDWRCDGDSDCSDESDERQCERPECSMNQFQCNNGRCIQKEWKC 203
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
DG DC +D SDE + C GQ +C L CI +CD E C
Sbjct: 204 DGDFDC-QDMSDEQDCGYIGCTAGQFRC-LDGTCISEKSVCDGEPHC 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 63/139 (45%), Gaps = 21/139 (15%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNS---WD-LPAP 99
WD ++++ + L F+ N+ L + N R+ I+ L S W+ L P
Sbjct: 728 WDGTNQKMVAQANAADLAFDWINRKLYWTDAMNA---RIEVCHIDGSLRSLLHWNSLYKP 784
Query: 100 EIFPLDE--------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD 145
+D ++E++ M G R+ LV ++WP++L ID+ + LYW D
Sbjct: 785 RGIVVDPLRGFLYWTDWGDVPKIERSTMAGSARTVLVPNGLKWPNALAIDHGSETLYWTD 844
Query: 146 SHLNTVESVRVDGSHNAVL 164
+++ +E + ++ VL
Sbjct: 845 ANMKLIEMLHLESMTRRVL 863
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
R+E+ M G R L ++ WP+ + +DY + +YW D LNT+E +DG
Sbjct: 494 RIERIFMDGSERRTLFNSSLFWPNGITVDYPTNSIYWSDGKLNTLECATIDG 545
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++E+A + G +R +V ++ WP+ L +DY +YW D+ ++ +E ++G H L
Sbjct: 1418 KIERAYLDGSSRRVIVATDLGWPNGLTVDYEAKRIYWVDAQMDCIEMSDLNGKHRTKLVI 1477
Query: 166 ---HPNEL 170
HP L
Sbjct: 1478 DVGHPFGL 1485
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+++A G NR L+ + WP L +D L W D+ +T+ESV +DG VL
Sbjct: 1118 RVDRADADGRNRKTLIIGKLGWPHCLAVDLQAGRLVWADAKSHTIESVDLDGRDRRVL 1175
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
P Q P + C ++ SC C + ++ C+C +G TL D K+C+ P+D
Sbjct: 611 PLRQPPGENPCTNS-------SCSHMCFSNLKAFTCACPDGLTLLADNKTCS--QWPED- 660
Query: 463 PASIIFSSTVDIRRI 477
+IIFS DIRR+
Sbjct: 661 --AIIFSIRGDIRRM 673
>gi|410046577|ref|XP_003952220.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Pan troglodytes]
Length = 4419
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 159/337 (47%), Gaps = 40/337 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GMGKCIPES 221
C + C +++C++ CDG DC +G DE C + C P FSC G C+PE
Sbjct: 2629 FCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGTHVCVPER 2687
Query: 222 WKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC DG+DE C++ C + + C +++CIP +++CD + DC+
Sbjct: 2688 WLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRDCA----- 2740
Query: 278 DNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + ++ C + +CA + W CD E DC D +DE +
Sbjct: 2741 DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE------APK 2789
Query: 337 AVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CS 388
C E +C +S+Q CVA + C+G+ DC + DE N+ L CS
Sbjct: 2790 NPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSGCS 2849
Query: 389 HKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C G C C G + C D DEC C Q C NTH SY C C EGY
Sbjct: 2850 QDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAP 2909
Query: 447 R-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2910 RGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 2943
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3432 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3490
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3491 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3541
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3542 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3589
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3590 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3649
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3650 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3709
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3710 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3769
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3770 DDNEIRSLF 3778
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3239 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3297
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3298 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3352
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3353 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3403
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3404 IPARWKCDGEDDCGDGSDE 3422
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 99/211 (46%), Gaps = 31/211 (14%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2511 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2569
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
SDE N C F V+ C + C +W+CD DC D +DE
Sbjct: 2570 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG-----DYSDERD 2624
Query: 284 -WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCH 341
DKF C Q +C + +CI WLCD +DD D +DE +H C
Sbjct: 2625 CPDKF--CSEAQFECQ-NHRCISKQWLCD-----GSDDCGDGSDE-----AAHCEGKTCG 2671
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P+ C ++ CV CDG DC++G DE
Sbjct: 2672 PSSFSCPGTHVCVPERWLCDGDKDCADGADE 2702
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3921 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 3977
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3066 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3122
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 20/191 (10%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2466 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2524
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2525 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2578
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNN-K 379
D YF VL P C ++ C A S CDG DC + DE FC+ +
Sbjct: 2579 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDERDCPDKFCSEAQ 2634
Query: 380 ADCENLKCSHK 390
+C+N +C K
Sbjct: 2635 FECQNHRCISK 2645
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
M G+NR+ LV I +PS + +D ++YW D++L+ +E V +G +
Sbjct: 353 MDGQNRTKLVDSKIVFPSRITLDPGSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|47123899|gb|AAH70552.1| VLDLR protein [Xenopus laevis]
Length = 869
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C E+ CG S QC+ LS CDG+ DC+N EDE N C+P +F+C G+CI ++
Sbjct: 112 CRATEIGCGVRSTQCIPLSWKCDGERDCANAEDEENCGNITCSPSEFTCSSGRCISSTFV 171
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE N C + QC + CIP W+CD+E DC+ +D+ ++
Sbjct: 172 CNGQNDC-SDGSDEVNCVPPTCGAHEFQCK-NFSCIPLGWVCDDEPDCADHSDESLEQCG 229
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++ C S +CI W CD + DC D +DE + + C
Sbjct: 230 RQPIAPQRCSANEMPCG-SGECIHKKWRCDGDADCK-----DKSDE-----INCPSRTCQ 278
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ +C N C+ S+ CDG DC +G DE GP C
Sbjct: 279 PDQFKCEDGN-CIHGSRQCDGVRDCLDGTDEIRCKNVIQCSGPGKFKCKSGECIESNKVC 337
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N DC+ N CSH C P G C C AG + ++ C D D
Sbjct: 338 NKHKDCKDWSDEPVKDCEVDECLENNGGCSHICHDLPIGYECECTAGFKLIDRKTCGDID 397
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC C Q C N Y C C++GY + P C AV EP +IF++ DIR++
Sbjct: 398 ECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVG---REPC-LIFTNRRDIRKV 453
Query: 478 HL 479
L
Sbjct: 454 GL 455
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 111/251 (44%), Gaps = 48/251 (19%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
LC ++ +CG+ +L K CDG DCS+G DE C F C G+C+P
Sbjct: 28 TTTLCEESQFQCGNGRCITSLWK-CDGDEDCSDGSDESSCVKKTCAESDFVCRNGQCVPS 86
Query: 221 SWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST---- 273
W+CDG DC EDGSDE P C + C ++ C + S +CIP +W CD E DC+
Sbjct: 87 RWECDGDPDC-EDGSDETPELCYMRTCRATEIGCGVRSTQCIPLSWKCDGERDCANAEDE 145
Query: 274 ------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D D +DE C + QC + C
Sbjct: 146 ENCGNITCSPSEFTCSSGRCISSTFVCNGQNDCSDGSDEVNCVPPTCGAHEFQCK-NFSC 204
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCD 361
IP W+CD+E DC+ D++DE ++ C NE+ CG S +C+ CD
Sbjct: 205 IPLGWVCDDEPDCA-----DHSDESLEQCGRQPIAPQRCSANEMPCG-SGECIHKKWRCD 258
Query: 362 GKPDCSNGEDE 372
G DC + DE
Sbjct: 259 GDADCKDKSDE 269
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R L+T ++Q PS + ID + LYW DS L+T+ SV ++G V+
Sbjct: 581 KIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHTLSSVDLNGQDRRVILK 640
Query: 167 PNEL 170
+E
Sbjct: 641 SHEF 644
>gi|148236551|ref|NP_001084168.1| very low-density lipoprotein receptor precursor [Xenopus laevis]
gi|2366773|dbj|BAA22145.1| vitellogenin receptor [Xenopus laevis]
Length = 869
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 166/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C E+ CG S QC+ LS CDG+ DC+N EDE N C+P +F+C G+CI ++
Sbjct: 112 CRATEISCGVRSTQCIPLSWKCDGERDCANAEDEENCGNITCSPSEFTCSSGRCISSTFV 171
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE N C + QC + CIP +W+CD+E DC+ +D+ ++
Sbjct: 172 CNGQNDC-SDGSDEVNCVPPTCGAHEFQCK-NFSCIPLSWVCDDEPDCADHSDESLEQCG 229
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++ C S +CI W CD + DC D +DE + + C
Sbjct: 230 RQPIAPQRCSANEMPCG-SGECIHKKWRCDGDADCK-----DKSDE-----INCPSRTCQ 278
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------GPF-------------C 376
P++ +C N C+ S+ CDG DC +G DE G F C
Sbjct: 279 PDQFKCEDGN-CIHGSRQCDGVRDCLDGTDEIRCKNVIQCSVPGKFKCKSGECIESNKVC 337
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N DC+ N CSH C P G C C AG + ++ C D D
Sbjct: 338 NKHKDCKDWSDEPVKDCEVDECLENNGGCSHICHDLPIGYECECTAGFKLIDRKTCGDID 397
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC C Q C N Y C C++GY + P C AV EP +IF++ DIR++
Sbjct: 398 ECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVG---REPC-LIFTNRRDIRKV 453
Query: 478 HL 479
L
Sbjct: 454 GL 455
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 152/380 (40%), Gaps = 93/380 (24%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
LC ++ +CG+ +L K CDG DCS+G DE C F C G+C+P
Sbjct: 28 TTTLCEESQFQCGNGRCITSLWK-CDGDEDCSDGSDESSCVKKTCAESDFVCRNGQCVPS 86
Query: 221 SWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST---- 273
W+CDG DC EDGSDE P C + C ++ C + S +CIP +W CD E DC+
Sbjct: 87 RWECDGDPDC-EDGSDETPELCYMRTCRATEISCGVRSTQCIPLSWKCDGERDCANAEDE 145
Query: 274 ------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D D +DE C + QC + C
Sbjct: 146 ENCGNITCSPSEFTCSSGRCISSTFVCNGQNDCSDGSDEVNCVPPTCGAHEFQCK-NFSC 204
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCD 361
IP +W+CD+E DC+ D++DE ++ C NE+ CG S +C+ CD
Sbjct: 205 IPLSWVCDDEPDCA-----DHSDESLEQCGRQPIAPQRCSANEMPCG-SGECIHKKWRCD 258
Query: 362 GKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCF 401
G DC + DE C ++ CE+ C H +C C
Sbjct: 259 GDADCKDKSDEINCPSRTCQPDQFKCEDGNCIHGSRQCDGVRDCLDGTDEIRCKNVIQCS 318
Query: 402 CPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHLSYV 437
P +C+++ DECL +G C C + + Y
Sbjct: 319 VPGKFKCKSGECIESNKVCNKHKDCKDWSDEPVKDCEVDECLENNGGCSHICHDLPIGYE 378
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C CT G+ L D K+C ++
Sbjct: 379 CECTAGFKL-IDRKTCGDID 397
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R L+T ++Q PS + ID + LYW DS L+T+ SV ++G V+
Sbjct: 581 KIEKAGMNGIDRQQLITADVQRPSGIAIDVVKSRLYWVDSKLHTLSSVDLNGQDRRVILK 640
Query: 167 PNEL 170
+E
Sbjct: 641 SHEF 644
>gi|297262738|ref|XP_001099678.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1,
partial [Macaca mulatta]
Length = 2409
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 34/319 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 987 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 1045
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1046 ETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGV 1100
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1101 THVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPPSH 1150
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1151 PCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1209
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1210 LGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1268
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1269 --PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q +KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADSKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDA 797
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C G C+ ED+ G C A +C PG
Sbjct: 798 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPG 857
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 858 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 916
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 917 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 967
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 968 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 1011
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 1012 SHSCSST 1018
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G + V+
Sbjct: 2025 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVL 2084
Query: 166 HPNEL 170
N +
Sbjct: 2085 SSNNM 2089
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2351 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2406
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
>gi|156391903|ref|XP_001635789.1| predicted protein [Nematostella vectensis]
gi|156222886|gb|EDO43726.1| predicted protein [Nematostella vectensis]
Length = 711
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/375 (31%), Positives = 163/375 (43%), Gaps = 43/375 (11%)
Query: 144 CDSHLNTVESVRVDGSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
CD + + R D S+ V C +E C S+ +C++ S CD + DC + DE
Sbjct: 59 CDGEDDCRDGYRSDESNCGNVTCGADEFMC-SNRKCISRSWTCDNQDDCGDNSDEDRNVQ 117
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALS-KKCI 259
C QF+C G CI SW CDG DC DGSDE + C + C S +KCI
Sbjct: 118 RTCASNQFTCSNGDCISNSWTCDGDNDC-NDGSDEKESLCASKSCKITEFTCRTSRRKCI 176
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD + DC +C G +C + +C+ +W CD E DCS
Sbjct: 177 PSQWKCDGDNDCPDSSDESGCPTASVSPRRCSVGMFKCR-NGECVLGHWRCDGEKDCSDG 235
Query: 320 ------------------------------DIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
D N + D+ C P E +C S
Sbjct: 236 SDEKGCRKSNCASSEFTCANGQCIPSSQRCDGTSNCRDSSDEKACVTPPPCMPGEFKCQS 295
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQNP 408
+ +C+ SK CDG DC +GEDE CN ++ N CS KC+ G C C +G
Sbjct: 296 TGRCIPESKVCDGTRDCQDGEDEPLRCNIDECKDHNGHCSQKCNDLTLGYNCSCFSGYKL 355
Query: 409 NKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
+ CVD DEC G+C Q C N S+ CSC GY + DG++C A S++
Sbjct: 356 QGARLCVDIDECAEYGTCSQVCENRKGSFKCSCLPGYRIDGDGRTCRANGT----LPSLV 411
Query: 468 FSSTVDIRRIHLNGS 482
+SS IR + ++G+
Sbjct: 412 YSSQFSIRNVTVSGA 426
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 104/370 (28%), Positives = 141/370 (38%), Gaps = 101/370 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C S +C+ L CDG+ DCS+G DE C QF+C GKCI +WKC
Sbjct: 1 CSHGQFECVSDQKCIVLRWRCDGEDDCSDGSDE-QGSPKTCLQDQFTCRNGKCIQATWKC 59
Query: 225 DGFVDCLEDG--SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DG DC DG SDE N C + C+ ++KCI +W CD + DC DN+DE
Sbjct: 60 DGEDDC-RDGYRSDESNCGNVTCGADEFMCS-NRKCISRSWTCDNQDDCG-----DNSDE 112
Query: 283 DWDKFHQCFNGQVQCA------------------------------------------LS 300
D + C + Q C+
Sbjct: 113 DRNVQRTCASNQFTCSNGDCISNSWTCDGDNDCNDGSDEKESLCASKSCKITEFTCRTSR 172
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+KCIP W CD + DC D++DE S + C +C + +CV C
Sbjct: 173 RKCIPSQWKCDGDNDCP-----DSSDESGCPTASVSPRRCSVGMFKC-RNGECVLGHWRC 226
Query: 361 DGKPDCSNGEDEGP-----FCNNKADCENLKC---SHKCSPTPR------GAMCFCPAGQ 406
DG+ DCS+G DE +++ C N +C S +C T C P
Sbjct: 227 DGEKDCSDGSDEKGCRKSNCASSEFTCANGQCIPSSQRCDGTSNCRDSSDEKACVTPPPC 286
Query: 407 NPNKTQCVDADECL-----------------------ID------GSCDQTCTNTHLSYV 437
P + +C C+ ID G C Q C + L Y
Sbjct: 287 MPGEFKCQSTGRCIPESKVCDGTRDCQDGEDEPLRCNIDECKDHNGHCSQKCNDLTLGYN 346
Query: 438 CSCTEGYTLR 447
CSC GY L+
Sbjct: 347 CSCFSGYKLQ 356
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 102 FPLDERLEKAGMHGE--NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ + R+E+AGM G+ R+ +++ + WP+ L IDY LYW D+ L +ES R+DGS
Sbjct: 541 WGYNARIERAGMDGDASTRTIIISGELGWPNGLTIDYTIKRLYWADARLKRIESSRLDGS 600
Query: 160 HNAVL 164
++
Sbjct: 601 DRRLI 605
>gi|441632367|ref|XP_004089687.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Nomascus leucogenys]
Length = 4440
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 34/319 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 933 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 991
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 992 ETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGV 1046
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1047 THVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPPSH 1096
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1097 PCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1155
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1156 LGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1214
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1215 --PFIIFSNRHEIRRIDLH 1231
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/320 (33%), Positives = 148/320 (46%), Gaps = 40/320 (12%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC +GEDE CN C+ QF C +CI + W CDG DC DG
Sbjct: 2651 SGRCIPMSWTCDKEDDCEHGEDE-THCNKFCSEAQFECQXHRCISKQWLCDGSDDC-GDG 2708
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNG 293
S++ C +CIP +++CD + DC+ D +DE + ++ C
Sbjct: 2709 SNKAAHC-------XXXXXXXXQCIPKHFVCDHDRDCA-----DGSDEXPECEYPTCGPS 2756
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ- 352
+ +CA + W CD E DC D +DE + C E +C +S+Q
Sbjct: 2757 EFRCANGRCLSSRQWECDGENDCH-----DQSDE------APKNPHCTSPEHKCNASSQF 2805
Query: 353 ------CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG 405
CVA + C+G+ DC + DE N+ L CS C G C C G
Sbjct: 2806 LCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSGCSQDCEDLKIGFKCRCRPG 2865
Query: 406 --QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDE 462
+ C D DEC C Q C NTH SY C C EGY R D SC AV DE
Sbjct: 2866 FRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVT---DE 2922
Query: 463 PASIIFSSTVDIRRIHLNGS 482
+IF++ +R+++L+GS
Sbjct: 2923 EPFLIFANRYYLRKLNLDGS 2942
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3432 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3490
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3491 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3541
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3542 ----ACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3589
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3590 VCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3649
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3650 CLSFSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3709
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3710 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3769
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3770 DDNEIRSLF 3778
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 3347 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 3406
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC DGSDEP + C Q +C + +C+P W CD + DC D
Sbjct: 3407 RWKCDGEDDC-GDGSDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 3459
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE+ C + CA + +CI W CD + DC+ D +DE
Sbjct: 3460 NSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTP 3507
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ L CD DC +G DE
Sbjct: 3508 RCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 3540
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 127/305 (41%), Gaps = 72/305 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------------------------- 198
C P + +C S+ C + CDG DC + DE
Sbjct: 3273 CRPGQFQC-STGICTNPAFICDGDNDCQDNSDEANCGKALPAHLPSFPSIFPTPGFGAFK 3331
Query: 199 -----------PFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQ-C 245
P C P QF C + K CIP W CD DC+ DGSDEP C C
Sbjct: 3332 AGKEGPHSLACPAAEVTCAPNQFQCSITKRCIPRVWVCDRDNDCV-DGSDEPANCTQMTC 3390
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ +C S +CIP W CD E DC D D E+ D+ C Q +C + +C+P
Sbjct: 3391 GVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPKEECDE-RTCEPYQFRCK-NNRCVP 3446
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD + DC DN+DE+ S C +E C ++ +C+A CDG D
Sbjct: 3447 GRWQCDYDNDCG-----DNSDEE-----SCTPRPCSESEFSC-ANGRCIAGRWKCDGDHD 3495
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSC 425
C++G DE C + D + +C + C P + +C DAD +DGS
Sbjct: 3496 CADGSDEKD-CTPRCDMDQFQC--------KSGHCI------PLRWRC-DADADCMDGSD 3539
Query: 426 DQTCT 430
++ C+
Sbjct: 3540 EEACS 3544
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 138/347 (39%), Gaps = 85/347 (24%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D I+ D R +E A + G NR +++++I P + +D +YW D
Sbjct: 3094 TLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFEDYVYWTDWETK 3151
Query: 150 TVESV-RVDGSHNAVLC----------------------HPNELRCGSSNQCVALSKFCD 186
++ + G++ +L HP ++ G + LS
Sbjct: 3152 SINRAHKTTGTNKTLLISTLHRPMDLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGG 3211
Query: 187 GKPDCSNG---EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
K C +G C + CT QF C KCIP WKCD DC D SDEP C
Sbjct: 3212 HKCACPTNFYLGSDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDC-GDHSDEPPDCPE 3270
Query: 244 -QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-------------------- 282
+C GQ QC+ + C ++CD + DC DN+DE
Sbjct: 3271 FKCRPGQFQCS-TGICTNPAFICDGDNDCQ-----DNSDEANCGKALPAHLPSFPSIFPT 3324
Query: 283 -DWDKFHQ----------------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ F C Q QC+++K+CIP W+CD + DC VD +
Sbjct: 3325 PGFGAFKAGKEGPHSLACPAAEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGS 3379
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + + C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3380 DEP----ANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3422
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 651 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 709
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 710 SVYRLERGVGGTPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 769
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 770 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 829
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 830 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 885
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 886 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 935
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 936 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 964
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 96/212 (45%), Gaps = 25/212 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2520 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2578
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2579 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2636
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2637 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2684
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C ++C++ CDG DC +G ++ C
Sbjct: 2685 FEC-QXHRCISKQWLCDGSDDCGDGSNKAAHC 2715
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 624 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 683
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 684 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGTPPTVTLLRSERPPIFEIRM 740
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 741 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 798
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 799 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 849
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 850 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 900
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 901 CDLDDDCGDRSDESASC 917
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3921 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 3977
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3069 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3125
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 1978 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2032
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2304 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2360
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2475 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2533
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2534 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2587
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2588 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2631
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1352 WDASMP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1404
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1405 YSARYDGSGHMEVLRGHEF 1423
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
>gi|395515031|ref|XP_003761711.1| PREDICTED: very low-density lipoprotein receptor [Sarcophilus
harrisii]
Length = 983
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 121/366 (33%), Positives = 170/366 (46%), Gaps = 65/366 (17%)
Query: 161 NAVLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C NE+ CG S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI
Sbjct: 245 NMRTCRINEISCGVRSTQCIPVSWKCDGENDCDSGEDEENCGNVTCSPEEFTCSSGRCIS 304
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIV 277
+++ C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ +
Sbjct: 305 KNFVCNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCSDQSDESL 362
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ +C ++QC S +CI W CD + DC D +DE + +
Sbjct: 363 EQCGRQPVPHEKCPASEIQCG-SGECIHMKWRCDGDPDCK-----DGSDE-----INCPS 411
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------- 374
C P++ C N C+ S+ C+G DC +G DE GP
Sbjct: 412 RTCRPDQFECEDGN-CIHGSRQCNGVRDCIDGTDELNCKNANQCSGPGKFKCRSGECIDI 470
Query: 375 --FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQC 413
CN + DC+ N CSH C G C C AG + ++ C
Sbjct: 471 SKVCNQQQDCKDWSDEPLKECNINECLINNGGCSHICKDLIIGYECDCAAGFELIDRKTC 530
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC G C Q C N Y C C+ GY + C AV EP S+IF++ D
Sbjct: 531 GDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRD 586
Query: 474 IRRIHL 479
IR+I L
Sbjct: 587 IRKIGL 592
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 112/401 (27%), Positives = 167/401 (41%), Gaps = 99/401 (24%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
+ WC S ++ V+G+ C ++ +C S+ +C+ L CDG DCS+G DE
Sbjct: 150 VAMWCLSGERSI----VEGTRTK--CESSQFQC-SNGRCITLLWKCDGDEDCSDGSDESS 202
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SK 256
C F C G+C+P W+CDG DC EDGSDE P C + C ++ C + S
Sbjct: 203 CVKKTCAESDFVCNNGQCVPNRWQCDGDPDC-EDGSDERPEQCNMRTCRINEISCGVRST 261
Query: 257 KCIPHNWLCDEEMDCST----------------------------------DDIVDNTDE 282
+CIP +W CD E DC + DD D +DE
Sbjct: 262 QCIPVSWKCDGENDCDSGEDEENCGNVTCSPEEFTCSSGRCISKNFVCNGQDDCSDGSDE 321
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LC 340
C + QC+ S CIP +W+CD++ DCS D +DE ++ C
Sbjct: 322 LDCAPPTCGAHEFQCSTS-SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVPHEKC 375
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCS 392
+E++CG S +C+ + CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 376 PASEIQCG-SGECIHMKWRCDGDPDCKDGSDEINCPSRTCRPDQFECEDGNCIHGSRQCN 434
Query: 393 PT------------PRGAMCFCPAGQNPNKTQCVD-----------------------AD 417
C P +C+D +
Sbjct: 435 GVRDCIDGTDELNCKNANQCSGPGKFKCRSGECIDISKVCNQQQDCKDWSDEPLKECNIN 494
Query: 418 ECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
ECLI +G C C + + Y C C G+ L D K+C ++
Sbjct: 495 ECLINNGGCSHICKDLIIGYECDCAAGFEL-IDRKTCGDID 534
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++N + + +S L + L NS DL P +D
Sbjct: 655 AIAVDWVYKNIYWTDVASKTISVATLDGTKRKILFNS-DLREPASIAVDPLSGFVYWSDW 713
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R PLVT +IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 714 GEPAKIEKAGMNGLDRRPLVTVDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRR 773
Query: 163 VLCHPNEL 170
++ E
Sbjct: 774 IVLKSLEF 781
>gi|403268915|ref|XP_003926506.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Saimiri boliviensis boliviensis]
Length = 4544
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 103/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTEVCVPMSRLCNGVQDCVDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCNSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNLFDDCGDGSDEEDCNIDPKLTSCTTNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 112/235 (47%), Gaps = 23/235 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 895 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 953
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 954 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1007
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1008 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1063
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR 396
+E +C C+ L CDG DC + DE CE + +H C P+ +
Sbjct: 1064 TDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDPSVK 1109
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 144/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E +G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILFNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + + G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGIGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 130/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ +G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILFNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGIGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTEVCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCV-DGSDEGPHC 108
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTEVCVPMSRLCNGVQDCVDGSDEGPHC 108
>gi|380783481|gb|AFE63616.1| prolow-density lipoprotein receptor-related protein 1 precursor
[Macaca mulatta]
Length = 4544
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q +KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADSKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA C+G+ DC +G DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEVLLCNGQDDCGDGSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|34339|emb|CAA32112.1| LDL-receptor related precursor (AA -19 to 4525) [Homo sapiens]
gi|3493576|gb|AAC64265.1| lipoprotein receptor-related protein [Homo sapiens]
gi|83699653|gb|ABC40732.1| low density lipoprotein-related protein 1 (alpha-2-macroglobulin
receptor) [Homo sapiens]
Length = 4544
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|397509011|ref|XP_003824931.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1 [Pan
paniscus]
Length = 4544
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 103/202 (50%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSHLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSHLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSHLCNGVQDCMDGSDEGPHC 108
>gi|297692219|ref|XP_002823465.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Pongo abelii]
Length = 4444
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 966 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1024
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1025 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1079
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1080 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1129
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1130 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1188
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1189 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1248
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1249 K---PFIIFSNRHEIRRIDLH 1266
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + C PNE C
Sbjct: 8 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKTQRCQPNEHNCLG 62
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C +
Sbjct: 63 TELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCNSSFQL 122
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P D P
Sbjct: 123 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPV 181
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 182 LLIANSQNILATYLSGA 198
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 161/344 (46%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2626 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2684
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2685 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2742
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2743 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2790
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA C+G+ DC + DE N+
Sbjct: 2791 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEELLCNGQDDCGDSSDERGCHINECLS 2846
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2847 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 2906
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2907 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 2947
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3436 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3494
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3495 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3545
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3546 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3593
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3594 VCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3653
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3654 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3713
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3714 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3773
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3774 DDNEIRSLF 3782
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3243 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3301
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3302 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3356
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3357 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3407
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3408 IPARWKCDGEDDCGDGSDE 3426
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2474 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2532
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2533 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2590
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC V DE +H C +
Sbjct: 2591 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDC-----VYGEDE------THCNKFCSEAQ 2638
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2639 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2673
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 686 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 744
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 745 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 804
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 805 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 864
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 865 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 920
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 921 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 970
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 971 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 999
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 659 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 718
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 719 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 775
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 776 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 833
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 834 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 884
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 885 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 935
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 936 CDLDDDCGDRSDESASC 952
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3925 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 3981
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3070 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3126
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2013 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2067
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 95/222 (42%), Gaps = 32/222 (14%)
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWL 264
T +F C G+CI S CDG C + ++P+ C +C QC+ + +C+ +
Sbjct: 2426 TTNEFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLW 2484
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVD 323
C+ DC D +DE C G+ +C CI ++ C++ +DC D ++
Sbjct: 2485 CNGADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMN 2538
Query: 324 NTDEDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+ D YF VL P C ++ C A S CDG DC + DE D
Sbjct: 2539 CSATDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE-------RD 2587
Query: 382 CENLKCSHKCSPTPRGAMCF--CPAGQ-NPNKTQCVDADECL 420
C +K PR + + CP+G+ P C D+C+
Sbjct: 2588 CPGVK-------RPRCPLNYFACPSGRCIPMSWTCDKEDDCV 2622
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 8 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKTQRCQPNEHNCLGTELCV 67
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 68 PMSRLCNGVQDCM-DGSDEGPHC 89
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 328 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 385
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1387 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1439
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1440 YSARYDGSGHMEVLRGHEF 1458
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 53 CQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 90
>gi|126012562|ref|NP_002323.2| prolow-density lipoprotein receptor-related protein 1 precursor [Homo
sapiens]
gi|317373384|sp|Q07954.2|LRP1_HUMAN RecName: Full=Prolow-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; AltName: Full=Apolipoprotein E
receptor; Short=APOER; AltName: CD_antigen=CD91;
Contains: RecName: Full=Low-density lipoprotein
receptor-related protein 1 85 kDa subunit; Short=LRP-85;
Contains: RecName: Full=Low-density lipoprotein
receptor-related protein 1 515 kDa subunit;
Short=LRP-515; Contains: RecName: Full=Low-density
lipoprotein receptor-related protein 1 intracellular
domain; Short=LRPICD; Flags: Precursor
Length = 4544
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSQEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|355765149|gb|EHH62375.1| Prolow-density lipoprotein receptor-related protein 1, partial
[Macaca fascicularis]
Length = 2456
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 153/319 (47%), Gaps = 34/319 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 965 GRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDYSD 1023
Query: 236 DEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DK 286
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1024 ETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCEGV 1078
Query: 287 FHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1079 THVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPPSH 1128
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C CP
Sbjct: 1129 PCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCSCP 1187
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1188 LGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK- 1246
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1247 --PFIIFSNRHEIRRIDLH 1263
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 5 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 59
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C +
Sbjct: 60 TELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCNSSFQL 119
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q +KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P D P
Sbjct: 120 QADSKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPVDRPPV 178
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 179 LLIANSQNILATYLSGA 195
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 145/367 (39%), Gaps = 105/367 (28%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 656 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 715
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 716 EGPELNHAFGLCHHGNYLFWTEYRSGSVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDA 775
Query: 175 ------SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPG 208
+N+C + C G C+ ED+ G C A +C PG
Sbjct: 776 QQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADGVTCLANPSYVPPPQCQPG 835
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD
Sbjct: 836 EFACANSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDG 894
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC + N C Q CA S +CIP +W CD + DC D +DE
Sbjct: 895 DNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDE 945
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ C P ++ +C+ ++ CD DC + DE C
Sbjct: 946 SASCAYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA------------GC 989
Query: 388 SHKCSPT 394
SH CS T
Sbjct: 990 SHSCSST 996
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G + V+
Sbjct: 2010 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGENREVVL 2069
Query: 166 HPNEL 170
N +
Sbjct: 2070 SSNNM 2074
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + +C G C+
Sbjct: 5 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 64
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 65 PMSRLCNGVQDCM-DGSDEGPHC 86
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2336 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2392
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G
Sbjct: 325 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEG 376
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKC 258
C+P QF+C CI + W+CDG DC DGSDE P + +C + C ++ C
Sbjct: 5 CSPKQFACRDQITCISKGWRCDGERDC-PDGSDEAPEICPQSKAQRCQPNEHNCLGTELC 63
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDE 282
+P + LC+ DC +D +DE
Sbjct: 64 VPMSRLCNGVQDC-----MDGSDE 82
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 47 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 87
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1384 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1436
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1437 YSARYDGSGHMEVLRGHEF 1455
>gi|432934618|ref|XP_004081957.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Oryzias latipes]
Length = 4704
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 115/325 (35%), Positives = 158/325 (48%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ C S+ C+ CD DCS+G DE ECT Q C G C + +C
Sbjct: 126 CTGDQFTC-SNGMCIPALYRCDHMADCSDGSDERHCNYPECT--QLRCTNGACYDRTQRC 182
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D +DC DGSDE N C C G QC + CIP ++CD + DC D +DE
Sbjct: 183 DHVLDC-RDGSDEAN-CTQHCNAGMFQCQ-NGLCIPQRYVCDHDDDCG-----DRSDELN 234
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C C S +CI WLCD E DC DN DE K + C+P E
Sbjct: 235 CTYPTCKGNYFTCP-SGRCIHQVWLCDGEDDCE-----DNADE---KGCDNVPRECYPGE 285
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMC 400
C SS +C+ + K CDG+ DC +GEDE ++ C +L C H+C +P G C
Sbjct: 286 WPCPSSGKCIPMDKLCDGRVDCLDGEDETNTTASRNCSIWRCASLSCEHRCHASPDGGTC 345
Query: 401 FCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
CP+G + CVD D+C + G CDQ C + S+ CSC +GY L + C A +
Sbjct: 346 SCPSGYVVSGNDSRSCVDFDDCSMWGECDQVCEDRIGSHRCSCLQGYVLE-QHRYCRA-D 403
Query: 458 VPQDEPASIIFSSTVDIRRIHLNGS 482
+ P S+IFS+ D+ ++G+
Sbjct: 404 IQTGVP-SLIFSNGKDLIMGDIHGN 427
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 147/322 (45%), Gaps = 45/322 (13%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCI 218
H C+P + +C ++C+ + CDG DC +G DE C+ CT +F C G +CI
Sbjct: 1159 HLGSTCNPEQFQC-PDHRCIDPNYICDGDRDCVDGADEQD-CSYNCTANEFKCTNGHQCI 1216
Query: 219 PESWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ CDG DC D SDE P C H+ + QC C+P W CD DC
Sbjct: 1217 SSYYHCDGVFDC-SDRSDEHNCPTRPPGMCHHE---SEFQCQSDGSCVPSTWECDGHPDC 1272
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDE 327
D +DE H C +L + C+ +W+CD + DC D+ D D
Sbjct: 1273 E-----DGSDE----HHACPPRTCSSSLFRCDNGNCVLRSWICDGDNDCR--DMSDERDC 1321
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCE 383
+ C + +C + C+ ++ CD P+C NG DE P CN ++ C
Sbjct: 1322 PTPPF------RCPSWQWQCPGYSLCINITTVCDNTPNCPNGADESPLCNEHLPDQESCS 1375
Query: 384 --NLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
N C+H C P GA C CP G N +KT CVD DEC G C Q C N S+ C
Sbjct: 1376 DNNAGCTHGCIQGPFGAQCTCPVGYQLSNDSKT-CVDIDECNPPGLCSQHCFNERGSFRC 1434
Query: 439 SCTEGYTLRPDGKSCTAVNVPQ 460
C EGYTL D ++C + Q
Sbjct: 1435 HCQEGYTLEADQRTCKTSDSRQ 1456
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 165/407 (40%), Gaps = 102/407 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C P + +C S+N C+ S CDG DC + DE P + C+ +F C G+CIP W
Sbjct: 2868 CQPEQTKCQSTNICIPRSYLCDGDNDCGDMSDESPTHCATSTCSQSEFRCSSGRCIPAHW 2927
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQC------ALS------------------ 255
CDG DC DGSDEP +C I C Q +C ALS
Sbjct: 2928 YCDGGSDC-SDGSDEPLSCTTLIRTCNTDQFRCDDGRCIALSWICDGDNDCGDMSDEDQR 2986
Query: 256 ----------------------KKCIPHNWLCDEEMDCS--------------------- 272
+KCIP +W+CD + DC+
Sbjct: 2987 HNCANRTCSSSEFTCANNQPPQRKCIPRDWVCDGDADCADALDEHQNCTHRSCGINEFTC 3046
Query: 273 --------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+D D++DE + C Q C + +C+ +++CD + DC
Sbjct: 3047 SNGLCIRSSYRCDRRNDCGDSSDEQGCTYQPCQPHQFTCQ-NGRCVAQDFVCDGDNDCG- 3104
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN 377
D +DE + A C P RC + C+ LS+ CD DCS+ DE G N
Sbjct: 3105 ----DESDE-LEHMCRTPAPTCPPGNFRC-ENGHCIDLSRVCDRSDDCSDNSDEKGCGIN 3158
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHL 434
D +C H C+ T +C C G + ++ C D DEC S C Q C NT
Sbjct: 3159 ECTDPSIHRCDHNCTDTLTSFICTCLPGYHLMSDRKTCDDIDECSKTPSVCSQICENTAG 3218
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SYVC C GY PDG +C + + +IFS+ +R + +G
Sbjct: 3219 SYVCKCAPGYLREPDGHTCRQNS---NISPYLIFSNRYYLRNLSTDG 3262
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 144/323 (44%), Gaps = 18/323 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F CG G CI E +KC
Sbjct: 3804 CTESEFRC-ENLRCIPNRWVCDHDNDCEDNSDERDCELRTCHPGYFQCGSGHCIAERFKC 3862
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D +DE +C + NG +C H + DD DN+DE+
Sbjct: 3863 DGNADCL-DYTDE-TSCPTRFPNGAYCPPFLFECKNHVCVQPHWKCDGDDDCGDNSDEE- 3919
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H C + + +C + + E+ S +D D +DE + S C +E
Sbjct: 3920 --LHLCLDITCEGPFRFRCDNNRCIYSHELCNSVEDCGDGSDERMENCQSPTHGPCTDDE 3977
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSP-TPRGAMCFC 402
+C SS QC+ L CD DC + DE G + C C H C+ T G +C C
Sbjct: 3978 FKC-SSGQCIPLQYACDEYDDCGDESDELGCHQASGHTCSANLCEHNCTDLTDGGFLCSC 4036
Query: 403 PAGQNPNKTQ---CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL--RPDGKSCTAVN 457
+G P T+ C D +EC + G C Q C NT SY C C+EG+ P G C A
Sbjct: 4037 RSGYKPKDTERHNCEDVNECEVYGMCPQDCKNTKGSYECFCSEGFISFGEPHGTECAA-- 4094
Query: 458 VPQDEPASIIFSSTVDIRRIHLN 480
Q P ++ V IRR +L+
Sbjct: 4095 --QGNPPVLLLPDNVRIRRFNLS 4115
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 142/339 (41%), Gaps = 92/339 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ + GM G N++ ++T ++WP+ + IDY
Sbjct: 3391 IGRVGMDGTNKTAVITSKLEWPNGITIDYTNDKLYWSDAHLNYIEYSNLDGHHRHTVYDG 3450
Query: 138 -----------QDILYWCDSHLNTVESV-RVDGSHNAVL------------CHPNELR-- 171
+D +YW D + TVE + DGS VL CHP
Sbjct: 3451 NLPHPFALTVFEDTVYWTDWNTRTVEKGNKYDGSSREVLVNTTHRPFDVHVCHPYRQPIV 3510
Query: 172 ---CGSSNQ-CVALSKFCDGK-------PDCSNGEDEGPF--CNAECTPGQFSCGMG-KC 217
C +N C L DG PD G C CT Q+ C +C
Sbjct: 3511 NNPCAVNNGGCSHLCLIRDGGREHTCECPDHFLTVQTGGVSRCLPMCTSTQYRCANNERC 3570
Query: 218 IPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDEP+TC I C GQ QC+ C +LC+ DC
Sbjct: 3571 IPIWWKCDGQQDC-RDGSDEPSTCPIRHCHLGQFQCS-DGNCTSPYFLCNSNQDCP---- 3624
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED HQC + Q QCA +K+CIP +W CD E DC D++DED +
Sbjct: 3625 -DGSDEDPVLCATHQCESHQWQCA-NKRCIPESWQCDGEDDCG-----DHSDED----PA 3673
Query: 335 H-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H +A C P + +C + +C+ + CD DC + DE
Sbjct: 3674 HCSARTCRPGQFKC-RNGRCIPQAWKCDVDDDCGDNSDE 3711
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 107/217 (49%), Gaps = 26/217 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIP 219
+ C N CG+ +CV S CDG DC + DE + C+P F+C +C+P
Sbjct: 1038 TLQCGANSFSCGNG-KCVPNSYRCDGVDDCHDNSDEMSCGVNSTTCSPSAFTCANRRCVP 1096
Query: 220 ESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W+CDG DCL+D SDE P C Q CA + +CIPH W CD + DC
Sbjct: 1097 VGWRCDGHNDCLDD-SDEINCPTRVPGTCPANQFTCA-NHRCIPHTWRCDTDNDCG---- 1150
Query: 277 VDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE D C Q QC +CI N++CD + DC VD DE + S+
Sbjct: 1151 -DGSDEVDCHLGSTCNPEQFQCP-DHRCIDPNYICDGDRDC-----VDGADE---QDCSY 1200
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C NE +C + +QC++ CDG DCS+ DE
Sbjct: 1201 N---CTANEFKCTNGHQCISSYYHCDGVFDCSDRSDE 1234
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C ++ +C+ S CDG+ DC + DE P C+A C PGQF C G+CIP++W
Sbjct: 3639 CESHQWQC-ANKRCIPESWQCDGEDDCGDHSDEDPAHCSARTCRPGQFKCRNGRCIPQAW 3697
Query: 223 KCDGFVDCLEDGSDEP-NTCIHQCF----NGQVQCALSKKCIPHNWLCDEEMDCST---- 273
KCD DC D SDEP C+ + + + C + +C+P +C+ DC
Sbjct: 3698 KCDVDDDC-GDNSDEPLEECMGPAYRCDNHTEFDCRTNYRCVPLWSVCNGHNDCRDNSDE 3756
Query: 274 ---DDIVDNTDED------------WDKF----------------HQCFNGQVQCALSKK 302
D++ N D D W C + +C + +
Sbjct: 3757 QDCDELTCNPDGDFRCDNHRCIPLRWKCDGDDDCGDNSDERSCVPRSCTESEFRCE-NLR 3815
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP+ W+CD + DC DN+DE CHP +CGS C+A CDG
Sbjct: 3816 CIPNRWVCDHDNDCE-----DNSDER-----DCELRTCHPGYFQCGSG-HCIAERFKCDG 3864
Query: 363 KPDCSNGEDE 372
DC + DE
Sbjct: 3865 NADCLDYTDE 3874
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 83/174 (47%), Gaps = 25/174 (14%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A C GQF CG G+CIP W CDG DC++D SDE + C + QC +CIP
Sbjct: 44 AGCELGQFRCGTGRCIPGDWHCDGTSDCVDD-SDEQDCPQVTCDHSHFQCLSDGECIPDV 102
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W+CD+E DC D +DE + C Q C+ + CIP + CD DCS
Sbjct: 103 WVCDDEEDCE-----DGSDERQNCPGRTCTGDQFTCS-NGMCIPALYRCDHMADCS---- 152
Query: 322 VDNTDEDWDKYFSHNAVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y P +LRC ++ C ++ CD DC +G DE
Sbjct: 153 -DGSDERHCNY---------PECTQLRC-TNGACYDRTQRCDHVLDCRDGSDEA 195
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH + +C N C + C+ DC +G DE P A +C Q+ C +CIPESW
Sbjct: 3598 CHLGQFQCSDGN-CTSPYFLCNSNQDCPDGSDEDPVLCATHQCESHQWQCANKRCIPESW 3656
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CDG DC + ++P C C GQ +C + +CIP W CD + DC DN+D
Sbjct: 3657 QCDGEDDCGDHSDEDPAHCSARTCRPGQFKCR-NGRCIPQAWKCDVDDDCG-----DNSD 3710
Query: 282 EDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E ++ ++C N + C + +C+P +C+ DC DN+DE
Sbjct: 3711 EPLEECMGPAYRCDNHTEFDCRTNYRCVPLWSVCNGHNDCR-----DNSDE 3756
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 133/323 (41%), Gaps = 72/323 (22%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ I +P ++ + + Q +YW D + ++ + DGS V+
Sbjct: 2598 QKIERSSLTGSNREVIVSTAI-YPFAMTM-FGQ-FIYWTDWNTRSIYRANKHDGSDMRVM 2654
Query: 165 CH-----PNELRCGSSN---QC--------VALSKFCDGKPD-----CSNGED----EGP 199
P ++ +S QC S C P+ C +G +
Sbjct: 2655 IQNLPSRPMDIHVLASRKQQQCDSPCQQFNGGCSHICTPGPNGAECQCPSGGHWYLADNK 2714
Query: 200 FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQC 252
+C C PGQF+C G+CI WKCD DC DGSDE + CF+
Sbjct: 2715 YCIPDNGTRCQPGQFTCMNGRCIRALWKCDNDNDC-GDGSDELERVCGRLDLCFSLVFMI 2773
Query: 253 ALSK--------------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-F 291
LS +C+P+++ CD DC DN+DE F C
Sbjct: 2774 LLSSFIALSAFHTCEPTMFTCGNGRCVPYHYRCDHYNDCG-----DNSDEVGCLFRPCDP 2828
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
N + C + +CI ++C+ +C + D + C P + +C S+N
Sbjct: 2829 NTEFPCN-NGRCIAKEYVCNGINNCYDNGTSDEQN--------CPERTCQPEQTKCQSTN 2879
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C+ S CDG DC + DE P
Sbjct: 2880 ICIPRSYLCDGDNDCGDMSDESP 2902
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
LE+A M G NR ++ + WP+ + +D +YW DS + +E+ DG H + H
Sbjct: 553 LERAFMDGTNRYGVIGSKLGWPAGITLDLEAKRVYWVDSRYDYIETATYDGLHRKTVVH 611
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+EKA M G+ R+ +V+ + WP+ L IDY ++LY+ D++L+ ++ +G +
Sbjct: 1599 RIEKASMDGKLRTIIVSSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQVLA 1658
Query: 160 HNAVLCHPNEL 170
+ VL HP+ +
Sbjct: 1659 SDLVLQHPHAI 1669
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G R+ +V ++ WP+ L +DY + LYW D+ L +E + GS+ V+
Sbjct: 2556 KIERATLGGNFRTEIVNSSLVWPNGLTLDYEDERLYWADASLQKIERSSLTGSNREVI 2613
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E A M G+ R LV+ + + WP+ L +D+ N + +YWCDS N +ES++ DG+ +
Sbjct: 4254 RIESAWMDGQQRMVLVSDQGLGWPTGLAVDFVNGNRIYWCDSKENIIESMKHDGTDRKTV 4313
Query: 165 C-----HPNEL 170
HP L
Sbjct: 4314 TSGDIGHPYSL 4324
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ + M+G +R+ + + SL +D+ LYW D L T+E ++DG+H AVL
Sbjct: 1509 DRIWSSYMNGSDRAVIFDSGVTVTESLAVDWVGRNLYWTDYVLETIEVSKLDGTHRAVLL 1568
Query: 166 HPN 168
N
Sbjct: 1569 SEN 1571
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEI-------- 101
NG +A+++ N F+ + V +R+ LL + D+P +
Sbjct: 2166 NGIRGIAVDWAADNLYFTNAFLTETYVEVLRINTTYRRVLLKTQVDMPRHLVVDPRNRFL 2225
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ + ++E+A + G NR+ LV+ I P L +D+ +YW D L+ + +
Sbjct: 2226 FWADYGQNPKIERALLDGTNRTVLVSSGIITPRGLALDWKTGYVYWVDDSLDMIARISPQ 2285
Query: 158 GSHNAVL 164
G ++
Sbjct: 2286 GGETQIV 2292
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 416 ADECLID-GSCDQTCTNTH------LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
A+ C D G C+Q C +H L Y C C GY L DGK C +V ++F
Sbjct: 675 ANPCAADRGGCEQICILSHRSDNGGLGYRCKCRIGYDLHADGKRCLSVR------QFLLF 728
Query: 469 SSTVDIRRIHLNGS 482
SS + +R I N S
Sbjct: 729 SSQLAVRGIPFNLS 742
>gi|194863549|ref|XP_001970495.1| GG23343 [Drosophila erecta]
gi|190662362|gb|EDV59554.1| GG23343 [Drosophila erecta]
Length = 4647
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 122/225 (54%), Gaps = 21/225 (9%)
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD + DC D +DE + + +C GQ +C +S+ CIP+NWLCD E DC D
Sbjct: 3 WKCDSKADCP-----DMSDEGSECAEAPKCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGD 57
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK- 379
D + + C E +C + + C+ LS+FCDG DC N E + C+ +
Sbjct: 58 TSDELNCP-----NGATPKCRAFEGQCRNGD-CLELSRFCDGHWDCDNDELQ---CDKQN 108
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C L CS C TP+GA C+CP Q P N T+CVD DEC G+CDQ C NT SY
Sbjct: 109 AACAALNCSFNCKLTPQGARCYCPKDQVPESSNSTRCVDYDECSEPGTCDQVCRNTPGSY 168
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
CSC GY + G C A+NVP EPA++ F S ++RI NG
Sbjct: 169 ECSCVSGYA-KTKGSRCRAINVPPTEPATLFFLSRDGVQRIGTNG 212
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/379 (31%), Positives = 160/379 (42%), Gaps = 71/379 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
+H V C P + RC N C+A S CDG+ DC++G DE C EC QF+C C
Sbjct: 2698 ANHTGVSCDPGQFRCARGN-CIAGSWHCDGEKDCADGSDE-LNCRFECGHNQFACDK-TC 2754
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP SW+CDG DC EDGSDE C Q C QC S +CIP W+CD E DC + +
Sbjct: 2755 IPASWQCDGKSDC-EDGSDEGPQCPSQACRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GL 2812
Query: 277 VDNTDEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDE 327
D E D+ QC S CI +++CD + DC DD +
Sbjct: 2813 GDEGSE--DEGPQCGGVAHIPDCPPPAHLCTSGLCIDSHYVCDGDEDCPGGDDEYEGCVP 2870
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------- 374
+ + L H + C+ ++ CDGKPDC++G DE
Sbjct: 2871 AFQPHSCPGGALMHQCQ-----DGVCIFKNQTCDGKPDCADGSDEASSLCAHTRGCNGTD 2925
Query: 375 --------------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAG 405
C+ + DC + C H+C G C C G
Sbjct: 2926 DFRCKNGACIHADLLCDRRNDCADFSDEELCNVNECLIPDICEHECEDKVIGYQCHCRPG 2985
Query: 406 QN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
+ C D DEC C QTC NT+ SY C C +GY L D +C A + +
Sbjct: 2986 YKVLARSPHLCTDIDECDEQQPCSQTCVNTYGSYKCLCAKGYAL-VDQHTCKATS---NV 3041
Query: 463 PASIIFSSTVDIRRIHLNG 481
+IFS+ IR++ + G
Sbjct: 3042 SMELIFSNRYYIRQVDMTG 3060
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 149/330 (45%), Gaps = 22/330 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG--QFSCGMGKCIPESW 222
C+ NE C S +C+ L+ DG DC +D +F C G+C +
Sbjct: 958 CNSNEFTCHKSGRCIQLTWVNDGVVDCGPDDDSDETSETILASKCPEFDCNNGRCRQFAD 1017
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
CDG +C + +DE C +C +G+ C C +CD +E +C+
Sbjct: 1018 VCDGIDNC-GNNADEME-CEQECEHGEKYCR-PIGCYGEMHMCDGIHDCVDFSDEANCNQ 1074
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDKY 332
++ W + +C + C +CIP CD C D ++ T + ++
Sbjct: 1075 TKSDNHPSTGWKELSECAPLEFACMDPFECIPDFLRCDGIPHCFDKTDELNCTHINASRF 1134
Query: 333 FSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
+ V+C HP+ L CG S QCV + + CDGK DC + DEG C +K +CSH+C
Sbjct: 1135 DMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLCADKLCDRGHECSHRC 1193
Query: 392 SPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G +C CP PN +C C +C Q C ++ Y C C +G+ L D
Sbjct: 1194 HNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGYDCRCLDGFDLGFD 1253
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C + DEP +IF++ DI+ I+L
Sbjct: 1254 RFTCKS--TAPDEPY-VIFTNRQDIKGINL 1280
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 98/213 (46%), Gaps = 17/213 (7%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ C +S C+ CDG PDC +G DE C PGQF C G CI SW CDG
Sbjct: 2667 VHCANSTMCIMPRWRCDGDPDCPDGTDELDCANHTGVSCDPGQFRCARGNCIAGSWHCDG 2726
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD- 285
DC DGSDE N C +C + Q C K CIP +W CD + DC D +DE
Sbjct: 2727 EKDC-ADGSDELN-CRFECGHNQFAC--DKTCIPASWQCDGKSDCE-----DGSDEGPQC 2777
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPN 343
C QC S +CIP W+CD E DC + + D ED A + C P
Sbjct: 2778 PSQACRPHLFQCKSSGRCIPQKWVCDGEKDCPS-GLGDEGSEDEGPQCGGVAHIPDCPPP 2836
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +S C+ CDG DC G+DE C
Sbjct: 2837 AHLC-TSGLCIDSHYVCDGDEDCPGGDDEYEGC 2868
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N ++CG SS CV K CDG DC GEDE C QF CG +C+P
Sbjct: 3433 CFDNHMKCGATANSSAFCVDNVKRCDGVRDCPGGEDESECTPLVCKKDQFQCGNNRCMPF 3492
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG +DC D SDE N C QC S +CIP W CD+E DC +
Sbjct: 3493 VWVCDGDIDC-PDKSDEANCDNVSCGPNDFQCD-SGRCIPLAWRCDDEHDCPNGE----- 3545
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF+ + C + KCIP W CD E DC D +DE +
Sbjct: 3546 ----DEPKSCFSSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3591
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C+ + CDG+ C + DE
Sbjct: 3592 CQMRNCSESEFRCGTG-KCIKHNYRCDGEIHCDDNSDE 3628
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPF---CNAECT------------PGQFSCGMGKCIPE 220
++C+ CDG C +G DE P C +E P F CG G+CIP
Sbjct: 2576 HRCIPKEHKCDGVQQCGDGSDETPLLCKCQSEEIDMHPSNNHTREMPDMFRCGSGECIPR 2635
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ CD DC D SDE C V CA S CI W CD + DC D
Sbjct: 2636 KFLCDSLKDC-RDFSDEKMCAPIPCEVSDMTFVHCANSTMCIMPRWRCDGDPDCP--DGT 2692
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D D C GQ +CA CI +W CD E DC+ D +DE ++
Sbjct: 2693 DELDCANHTGVSCDPGQFRCARG-NCIAGSWHCDGEKDCA-----DGSDELNCRF----- 2741
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL---KCSHKCSP 393
C N+ C + C+ S CDGK DC +G DEGP C ++A +L K S +C P
Sbjct: 2742 -ECGHNQFACDKT--CIPASWQCDGKSDCEDGSDEGPQCPSQACRPHLFQCKSSGRCIP 2797
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 153/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ + WP++L I + L
Sbjct: 3183 IGKAGMDGSNPKMIIRDGLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3242
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRC--- 172
YW D ++E + N + P +LR
Sbjct: 3243 IINPLLNLHHIFAIAVWEGRIYWSDWETKSIEYCSIFNGQNCNTLITTIHRPMDLRVFHP 3302
Query: 173 ------GSSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+A S C P+ C D+G C A CT F C
Sbjct: 3303 YRQQQPMSGNPCLAANCSTLCVLSPEEPYYKCMCPTNFMLADDGRTCRANCTAAHFECVN 3362
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP +C C GQ QCA +KKC + LCD C
Sbjct: 3363 TYKCIPFYWRCDTQDDC-GDGSDEPESCPPFHCEPGQYQCA-NKKCTHPSNLCDGINQCG 3420
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D +DE + DKF CF+ ++C +
Sbjct: 3421 -----DGSDELNCDKF-TCFDNHMKCGATANSSAFCVDNVKRCDGVRDCPGGEDESECTP 3474
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P W+CD ++DC D +DE + + V C PN+ +C
Sbjct: 3475 LVCKKDQFQCGNNRCMPFVWVCDGDIDCP-----DKSDE-----ANCDNVSCGPNDFQC- 3523
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD + DC NGEDE C ++KA C+ KC++ KC P
Sbjct: 3524 DSGRCIPLAWRCDDEHDCPNGEDEPKSCFSSKATCDPTYFKCNNSKCIP 3572
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 97/218 (44%), Gaps = 35/218 (16%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDE-GPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S +C+ L CD C++G DE +C +C F C +CIP+ KCDG C
Sbjct: 2534 SGECIPLELTCDNVTHCADGSDEFRRYCIFRQCPETHFMCQNHRCIPKEHKCDGVQQC-G 2592
Query: 233 DGSDE-PNTC--------IHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
DGSDE P C +H N +C S +CIP +LCD DC
Sbjct: 2593 DGSDETPLLCKCQSEEIDMHPSNNHTREMPDMFRCG-SGECIPRKFLCDSLKDCR----- 2646
Query: 278 DNTDEDWDKFHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE C V CA S CI W CD + DC D TDE +
Sbjct: 2647 DFSDEKMCAPIPCEVSDMTFVHCANSTMCIMPRWRCDGDPDCP-----DGTDE--LDCAN 2699
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H V C P + RC N C+A S CDG+ DC++G DE
Sbjct: 2700 HTGVSCDPGQFRCARGN-CIAGSWHCDGEKDCADGSDE 2736
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 99/214 (46%), Gaps = 25/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C N+ +C + N C+ CDG DC +G DE N C F+CG GKCI W
Sbjct: 3633 ITCKENQFKCAAFNTCINKQYKCDGDDDCPDGSDE---VNCTCHSDHFTCGNGKCIMSRW 3689
Query: 223 KCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG+ DCL DGSDE TC C +C ++ CI ++ LCD DC ++ D +
Sbjct: 3690 KCDGWDDCL-DGSDESLETCAKIHCHANAFKCR-NQLCIRNSALCDGVNDCGENE--DES 3745
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +C + Q QC + CI + CD + +C VD +DE + C
Sbjct: 3746 DAVCAALPKCRHDQFQCE-NDDCISKAFRCDGQYNC-----VDGSDE----------MNC 3789
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P GS +Q K C++G +GP
Sbjct: 3790 QPPVCGFGSCSQICIEKKAGHYNCKCADGYHKGP 3823
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1410 RIERASMSGDGRRLISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1469
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1470 VLRNKEI 1476
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 3988 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4047
Query: 164 L 164
+
Sbjct: 4048 V 4048
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 108 LEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L T +QWP SL +D LYWCD L+T+E +++DG+ V
Sbjct: 695 IYSAWMDGTHKELLAKDTSTMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTGREV 754
Query: 164 LCHPNELRCGSSNQCVALSKFCDGK 188
L ++ S Q L + D K
Sbjct: 755 LFKSDQFHPYSIVQSNGLIYWADNK 779
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++++ + G ++ +I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2359 IQRSYLTGYGTEVIIKTDIKMPNALTLDLEQQKLYWADARLDKIERTNYDGSNRVVLAH 2417
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 38
+C GQ +C +S+ CIP+NWLCD E DC D D
Sbjct: 26 KCNEGQFRCGVSRHCIPNNWLCDGEFDCGKGDTSD 60
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
L ++ + G NR+ LVT + PSS+ +D +++YW D + + V V +G + L P
Sbjct: 360 LSRSLLDGTNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 419
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+ + R D + + HP+ L CG S QCV + + CDGK DC + DEG C
Sbjct: 1129 INASRFDMNETVICEHPDRL-CGFSKQCVTVDQLCDGKNDCEDTTDEGFLC 1178
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 107 RLEKAGMHGENRSPLVT----KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
R+++ G H E + K W + ID+ + +YW D+ N +E R+DGSH
Sbjct: 1949 RVKRDGTHRETILEALNLVGYKQQDWLGGIAIDWVAENIYWSDTKRNIIEVARLDGSHRY 2008
Query: 163 VL 164
V+
Sbjct: 2009 VV 2010
>gi|402886618|ref|XP_003906725.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Papio anubis]
Length = 4476
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 105/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q +KT C D DEC + G+C Q CTNT S+VC C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADSKT-CKDFDECSVYGTCSQLCTNTDGSFVCGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2658 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2716
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2717 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2774
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2775 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2822
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA C+G+ DC +G DE N+
Sbjct: 2823 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEVLLCNGQDDCGDGSDERGCHINECLS 2878
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2879 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 2938
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2939 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 2979
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3468 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3526
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3527 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3577
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3578 ----ACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3625
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3626 VCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3685
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3686 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3745
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3746 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3805
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3806 DDNEIRSLF 3814
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3275 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3333
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3334 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3388
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3389 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3439
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3440 IPARWKCDGEDDCGDGSDE 3458
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 132/364 (36%), Gaps = 107/364 (29%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVSLRG 2417
Query: 164 -----------------LCHPNELRCG----------------------------SSNQC 178
L H + C ++ +C
Sbjct: 2418 ELSPCRINNGGCQDLCLLTHQGHVNCSCRGGRILQDDLTCRAVNSSCRAQDEFECANGEC 2477
Query: 179 VALSKFCDGKPDCSNGEDEGP-FCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+ S CDG P C + DE P +CN+ C C G+C+ C+G DC DGSD
Sbjct: 2478 INFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCSNGRCVSNMLWCNGADDC-GDGSD 2536
Query: 237 E-------------------------------PNTCIHQC---FNGQVQ------CALSK 256
E P C F V+ C +
Sbjct: 2537 EIPCNSKXGALAXPICTSWGVIGGNQESPSPLPPPGATDCSSYFRLGVKGVLFQPCERTS 2596
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
C +W+CD DC D D D K +C C S +CIP +W CD+E DC
Sbjct: 2597 LCYAPSWVCDGANDCG--DYSDERDCPGVKRPRCPLNYFACP-SGRCIPMSWTCDKEDDC 2653
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ DE +H C + C +++C++ CDG DC +G DE C
Sbjct: 2654 EHGE-----DE------THCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHC 2701
Query: 377 NNKA 380
K
Sbjct: 2702 EGKT 2705
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3957 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4013
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3102 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3158
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
>gi|426373114|ref|XP_004053457.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Gorilla gorilla gorilla]
Length = 4544
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
>gi|355564385|gb|EHH20885.1| Prolow-density lipoprotein receptor-related protein 1 [Macaca
mulatta]
Length = 4645
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 957 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1015
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1016 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1070
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1071 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1120
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1121 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1179
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1180 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1239
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1240 K---PFIIFSNRHEIRRIDLH 1257
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2698 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2756
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2757 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2814
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2815 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2862
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA C+G+ DC +G DE N+
Sbjct: 2863 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEVLLCNGQDDCGDGSDERGCHINECLS 2918
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2919 HKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 2978
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 2979 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3019
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 5/150 (3%)
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTP 395
A C PNE C + CV +S+ C+G DC +G DEGP C + +C L C H C PT
Sbjct: 41 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELRGNCSRLGCQHHCVPTL 100
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G C+C + Q +KT C D DEC + G+C Q CTNT S++C C EGY L+PD +S
Sbjct: 101 DGPTCYCNSSFQLQADSKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRS 159
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C A N P D P ++ +++ +I +L+G+
Sbjct: 160 CKAKNEPVDRPPVLLIANSQNILATYLSGA 189
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3372 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3430
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3431 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3485
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3486 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3536
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3537 IPARWKCDGEDDCGDGSDE 3555
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 103/215 (47%), Gaps = 29/215 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3565 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3623
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3624 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3674
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3675 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3722
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C PN RC + C+ + + CDG +C +G DE
Sbjct: 3723 VCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDGTDE 3757
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 156 VDGSH-----NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPG 208
VDGS + C +E RC S +C+ CDG+ DC +G DE C+ C P
Sbjct: 3509 VDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKEECDERTCEPY 3568
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
QF C +C+P W+CD DC D SDE + C + CA + +CI W CD +
Sbjct: 3569 QFRCKNNRCVPGRWQCDYDNDC-GDNSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGD 3626
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC+ D +DE D +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3627 HDCA-----DGSDEK-DCTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE 3674
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +E +C ++ C L+ CDG+ DC + DE P
Sbjct: 3675 ---ACGTGVRTCPLDEFQCNNT-LCKPLAWKCDGEDDCGDNSDENP 3716
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2546 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2604
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2605 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2662
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2663 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2710
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2711 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 677 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 735
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 736 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 795
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 796 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 855
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 856 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 911
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 912 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 961
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 962 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 990
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 650 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 709
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 710 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 766
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 767 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 824
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 825 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 875
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 876 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 926
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 927 CDLDDDCGDRSDESASC 943
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Query: 84 CAQINDLLNSWDLPAPEIFPLDE------------------RLEKAGMHGENRSPLVTKN 125
CAQ L++ LP + P ++E A M G R LV N
Sbjct: 4085 CAQTKKLVSCLGLPPLALRPAHTHPFSLPSTMYWSDWGNHPKIETAAMDGTLRETLVQDN 4144
Query: 126 IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
IQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4145 IQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4182
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3142 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3198
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2004 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2058
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2330 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2386
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2501 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2559
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2560 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2613
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2614 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2657
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 319 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 376
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1378 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1430
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1431 YSARYDGSGHMEVLRGHEF 1449
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 41 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 81
>gi|431894884|gb|ELK04677.1| Low-density lipoprotein receptor-related protein 2 [Pteropus alecto]
Length = 4395
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 154/337 (45%), Gaps = 47/337 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGK 216
+H C + C +NQC++ + CD DC +G DE CN A C P QF C +
Sbjct: 932 THTPTSCPASSFTC-DNNQCISRNWLCDTDNDCGDGSDE-KHCNFTATCLPSQFHCADHR 989
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CI + CDG DC+ DGSDE N C+ C Q +CA KCI + + CD DC +D
Sbjct: 990 CIDVFYVCDGDKDCV-DGSDE-NGCVINCTASQFKCASEDKCISNMYHCDGVFDC--NDH 1045
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD-------------- 320
D D C + QC CIP +W CD DC +D+
Sbjct: 1046 SDEKDCQTRPPGMCHPDEFQCQADGLCIPGSWECDGHPDCIHGSDEHNGCVLKTCSPSHF 1105
Query: 321 IVDNTD---EDW-------------DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
+ DN + +W +K A C + C + CV LS CDG
Sbjct: 1106 LCDNGNCILREWLCDGDNDCRDMSDEKDCPTQAFYCPSWQWHCPGYSICVNLSAVCDGVS 1165
Query: 365 DCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADEC 419
DC NG DE P CN ++ C NL C+H+C P GA C CP+G N +KT C D DEC
Sbjct: 1166 DCPNGTDESPLCNQES-CSNLNAGCTHQCVQGPFGAQCLCPSGYLLANDSKT-CEDIDEC 1223
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
G C Q C NT S+ C C + Y L DGK+C
Sbjct: 1224 DTPGFCSQHCHNTRGSFRCWCDKEYMLDTDGKTCKVT 1260
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 156/353 (44%), Gaps = 68/353 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C ++N C+ + CDG DC + DE FC C +F C G+CIP W
Sbjct: 2608 CQSGFTKCHTTNICIPRTYLCDGDNDCGDMSDESSTFCAFHTCNSNEFHCTSGRCIPSHW 2667
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DCL DGSDEP TC++ C + + +C S +CI W+CD + DC D+ D
Sbjct: 2668 YCDQERDCL-DGSDEPATCVYHESTCLSDEFKCD-SGRCIQREWICDGDNDCG--DMSDE 2723
Query: 280 TDEDWDKFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ + H C + + C S++CIP +W+CD + DC+ + +D+ +
Sbjct: 2724 DERHHCESHNCSSFEFLCVNNVPPSRRCIPQSWVCDGDADCT---------DGYDERQNC 2774
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCN-NKADCENLKCSHK 390
+ C N+ C S+ QC+ S CD DC + DE P CN N+ C+N C +K
Sbjct: 2775 SRGSCSENDFTC-SNGQCIPDSYRCDRHNDCGDYSDERDCSYPTCNGNQFTCQNGLCIYK 2833
Query: 391 CSPTPRGAMC----------------FCPAGQ----NPNKTQCV-------------DAD 417
C CP Q N N + V D
Sbjct: 2834 GYACDGENDCGDDSDELEHLCHIPETTCPPHQFKCDNGNCIEMVKVCNHLDDCSDNSDEK 2893
Query: 418 ECLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
C I+ CDQ CT+T S+ CSC GY L D ++C+ ++ ++ P
Sbjct: 2894 GCGINECHDPSLSGCDQNCTDTLTSFYCSCRPGYKLMSDKRTCSDIDECKETP 2946
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 159/367 (43%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCIPES 221
C+ NE C +S +C+ +CD + DC +G DE C + C +F C G+CI
Sbjct: 2650 CNSNEFHC-TSGRCIPSHWYCDQERDCLDGSDEPATCVYHESTCLSDEFKCDSGRCIQRE 2708
Query: 222 WKCDGFVDCLE-DGSDEPNTC-IHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDD 275
W CDG DC + DE + C H C + + C S++CIP +W+CD + DC+
Sbjct: 2709 WICDGDNDCGDMSDEDERHHCESHNCSSFEFLCVNNVPPSRRCIPQSWVCDGDADCT--- 2765
Query: 276 IVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW----- 329
D DE + C C+ + +CIP ++ CD DC D D D +
Sbjct: 2766 --DGYDERQNCSRGSCSENDFTCS-NGQCIPDSYRCDRHNDCG--DYSDERDCSYPTCNG 2820
Query: 330 DKYFSHNAV-----------------------LCH-------PNELRCGSSNQCVALSKF 359
+++ N + LCH P++ +C + N C+ + K
Sbjct: 2821 NQFTCQNGLCIYKGYACDGENDCGDDSDELEHLCHIPETTCPPHQFKCDNGN-CIEMVKV 2879
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C C+ T C C G +K C D
Sbjct: 2880 CNHLDDCSDNSDEKGCGINECHDPSLSGCDQNCTDTLTSFYCSCRPGYKLMSDKRTCSDI 2939
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGKSC + EP +IFS+ +R
Sbjct: 2940 DECKETPFVCSQKCENVMGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYLR 2996
Query: 476 RIHLNGS 482
+ ++GS
Sbjct: 2997 NLTIDGS 3003
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/290 (32%), Positives = 134/290 (46%), Gaps = 35/290 (12%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
P EC F C G CI SW+CDG DCL+D SDE C +G QC +
Sbjct: 21 APASGQECDSEHFRCEDGHCIAASWRCDGTKDCLDD-SDEIGCPPPSCQSGYFQCQSKEL 79
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CIP++W+CD+E DC D +DE C + Q+ C+ S +CIP+ + CD DC
Sbjct: 80 CIPNSWVCDDEQDCE-----DGSDEHQHCPGRTCSSHQMTCS-SGECIPNEYRCDHVRDC 133
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--- 373
S D TDE +Y + C ++ C S+ CD K DC + DE
Sbjct: 134 S-----DGTDEKDCRYPVCEQLTC--------ANGACYNASQRCDQKVDCRDYSDEDNCT 180
Query: 374 -PFCNNKADCENLKCSHKCSPTPRGAMC-FCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
P +N+ C + +C R +C P ++ + + D+C I G CDQ C +
Sbjct: 181 EPCSHNQFQCGSGEC------LTRNYICDHIPDCEDGSDEHSCNFDDCQIWGICDQMCED 234
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ C C EGY L + + C A N E AS+IFS D+ ++G
Sbjct: 235 RIGHHQCHCAEGYILEHE-RHCKA-NTSSGE-ASVIFSHGQDLLIGDIHG 281
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGM 214
+D +H +C + C + +C+ + CDG+ DCS+G DE P C C GQF C
Sbjct: 3289 IDSTHCLPMCSSTQFLCANKEKCIPIWWKCDGQRDCSDGSDEPPVCPQRYCRLGQFQCKD 3348
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G C + CD DC DGSDE H+C + + QCA +K+CIP W CD DC
Sbjct: 3349 GNCSSPYFLCDTHQDC-PDGSDEDIVLCEHHRCESNEWQCA-NKRCIPEAWQCDSINDCG 3406
Query: 273 TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DN+DED C G +CA + CIP +W CD + DC D +DE
Sbjct: 3407 -----DNSDEDSSHCASRLCQPGYFKCA-NGHCIPQSWKCDVDNDCG-----DYSDEPIQ 3455
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + E C ++ +C+ C+G DC + DE
Sbjct: 3456 ECMGPAYRCDNHTEFNCKTNYRCIPKWAVCNGVDDCRDNSDE 3497
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 157/375 (41%), Gaps = 103/375 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3132 IGRIGMDGINKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDG 3191
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS +L HP
Sbjct: 3192 TLSHPFAITIFEDTIYWTDWNTKTVEKGNKYDGSDRMMLVNTTHKPYDIHVYHPYRQPIV 3251
Query: 171 --RCGSSN-QCVALSKFCDGKPD--CSNGED-------EGPFCNAECTPGQFSCG-MGKC 217
CG++N C L G C +D + C C+ QF C KC
Sbjct: 3252 NNPCGTNNGGCSHLCLIEAGGKGFTCECPDDFKTIHLIDSTHCLPMCSSTQFLCANKEKC 3311
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDEP C + C GQ QC P+ +LCD DC
Sbjct: 3312 IPIWWKCDGQRDC-SDGSDEPPVCPQRYCRLGQFQCKDGNCSSPY-FLCDTHQDCP---- 3365
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD DC DN+DED S
Sbjct: 3366 -DGSDEDIVLCEHHRCESNEWQCA-NKRCIPEAWQCDSINDCG-----DNSDED----SS 3414
Query: 335 HNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPF--CNNKADCENL 385
H A LC P +C ++ C+ S CD DC + DE GP C+N + N
Sbjct: 3415 HCASRLCQPGYFKC-ANGHCIPQSWKCDVDNDCGDYSDEPIQECMGPAYRCDNHTEF-NC 3472
Query: 386 KCSHKCSPTPRGAMC 400
K +++C P+ A+C
Sbjct: 3473 KTNYRC--IPKWAVC 3485
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 102/326 (31%), Positives = 145/326 (44%), Gaps = 39/326 (11%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
RC +++QC+ L CDG DC + DE ECT +F C CIP W CD D
Sbjct: 3511 FRC-NNHQCIPLRWKCDGHDDCGDHSDEENCVPRECTESEFRCDDQSCIPSRWICDFNND 3569
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DW 284
C D SDE + + C G QC S C+P CD +DC +D +DE +
Sbjct: 3570 C-GDNSDERDCEMRTCHPGYFQCK-SGHCVPDELKCDGIIDC-----LDASDEAVCPTRF 3622
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PN 343
C + +C + C+ +W+CD + DC D +DE+ S V C P+
Sbjct: 3623 PNGAYCPATKFECK-NHVCVQSSWICDGDNDCG-----DGSDEELHLCLS---VPCESPH 3673
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNNKADCENLKCSHK-CSPTPR 396
RC +N+C+ + C+ DC +G DE GP ++ E KCS+K C
Sbjct: 3674 RFRC-DNNRCIYSHEMCNHMDDCGDGSDEKEENCVGPTPRPCSEDE-FKCSNKHCISQHL 3731
Query: 397 GAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP--DGKSCT 454
G ++T C + DEC G+C Q C N+ SY C C EG+ GK C
Sbjct: 3732 ACDDIDDCGDQSDETGC-NIDECEQFGTCPQHCQNSKGSYECYCAEGFRSLSITYGKRCE 3790
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLN 480
A P ++ V IR+ +L+
Sbjct: 3791 A----DGNPPLLLLPENVRIRKYNLS 3812
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 110/254 (43%), Gaps = 59/254 (23%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GK 216
P +CGS + +CV CDG DC + DE G F N C P F+CG G+
Sbjct: 849 PPLKQCGSFSFPCNNGRCVPSYYQCDGIDDCRDNSDEHLCGTF-NNSCAPSAFTCGHGGE 907
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDC-- 271
CIP W+CD DC+ DGSDE N H C C + +CI NWLCD + DC
Sbjct: 908 CIPAHWRCDKHNDCV-DGSDEQNCPTHTPTSCPASSFTCD-NNQCISRNWLCDTDNDCGD 965
Query: 272 ---------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCA 298
D VD +DE+ + C Q +CA
Sbjct: 966 GSDEKHCNFTATCLPSQFHCADHRCIDVFYVCDGDKDCVDGSDENGCVIN-CTASQFKCA 1024
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
KCI + + CD DC+ D++DE + +CHP+E +C + C+ S
Sbjct: 1025 SEDKCISNMYHCDGVFDCN-----DHSDE--KDCQTRPPGMCHPDEFQCQADGLCIPGSW 1077
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC +G DE
Sbjct: 1078 ECDGHPDCIHGSDE 1091
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 110/224 (49%), Gaps = 29/224 (12%)
Query: 174 SSNQCVALSKFCDGKPDCSNGE--DEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDC 230
S+ +C+ L C+G +C + + DE + C G C CIP ++ CDG DC
Sbjct: 2575 SNRRCIPLEFVCNGVNNCHDNDTSDEKNCPDRTCQSGFTKCHTTNICIPRTYLCDGDNDC 2634
Query: 231 LEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KF 287
D SDE +T H C + + C S +CIP +W CD+E DC +D +DE +
Sbjct: 2635 -GDMSDESSTFCAFHTCNSNEFHCT-SGRCIPSHWYCDQERDC-----LDGSDEPATCVY 2687
Query: 288 HQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVLCHPNE 344
H+ C + + +C S +CI W+CD + DC D +DED + SHN C E
Sbjct: 2688 HESTCLSDEFKCD-SGRCIQREWICDGDNDCG-----DMSDEDERHHCESHN---CSSFE 2738
Query: 345 LRCGS----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C + S +C+ S CDG DC++G DE C+ + EN
Sbjct: 2739 FLCVNNVPPSRRCIPQSWVCDGDADCTDGYDERQNCSRGSCSEN 2782
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 111/271 (40%), Gaps = 60/271 (22%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCI 218
N + C+ + C + C+ CD DC +G DE A C F+C G+C+
Sbjct: 2482 NGIRCNGSSFTC-LNGHCILEQWKCDNSNDCGDGSDELESVCAFHTCHSTAFTCDNGRCV 2540
Query: 219 PESWKCDGFVDC-----------------------------LE------------DGSDE 237
++CD + DC LE D SDE
Sbjct: 2541 QYHYRCDHYNDCGDNSDEKGCLFSDCNATTEFTCSNRRCIPLEFVCNGVNNCHDNDTSDE 2600
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
N C +G +C + CIP +LCD + DC D+ D + + FH C + + C
Sbjct: 2601 KNCPDRTCQSGFTKCHTTNICIPRTYLCDGDNDCG--DMSDESST-FCAFHTCNSNEFHC 2657
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S +CIP +W CD+E DC +D +DE + + C +E +C S +C+
Sbjct: 2658 T-SGRCIPSHWYCDQERDC-----LDGSDEPATCVYHEST--CLSDEFKC-DSGRCIQRE 2708
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + CE+ CS
Sbjct: 2709 WICDGDNDCGDMSDE----DERHHCESHNCS 2735
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C +C S C+ S CD + DC +G DE C C+ Q +C G+CIP ++
Sbjct: 67 CQSGYFQCQSKELCIPNSWVCDDEQDCEDGSDEHQHCPGRTCSSHQMTCSSGECIPNEYR 126
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD DC DG+DE + C Q+ CA + C + CD+++DC D +DED
Sbjct: 127 CDHVRDC-SDGTDEKDCRYPVC--EQLTCA-NGACYNASQRCDQKVDCR-----DYSDED 177
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ C + Q QC S +C+ N++CD DC
Sbjct: 178 -NCTEPCSHNQFQCG-SGECLTRNYICDHIPDC 208
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 115/303 (37%), Gaps = 66/303 (21%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WPS L +D+ +D+LYW D+ L +E + G ++
Sbjct: 2315 NAKIERATLGGNFRKPIVNSSLVWPSGLTVDHEEDLLYWADASLRRIERSTLMGMEREIV 2374
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKF-----------CDGK 188
P L + S Q + F D
Sbjct: 2375 VSTVFRPFGLTVNGQYIYWTDWSTKKIYRANKYDGSGQTAMTTSFPFWLMGIRVVVKDHP 2434
Query: 189 PDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPES--WKCDGFVDCLEDGSDEPNTCIHQC 245
CSN D+ C+ C PG + +C E + + C+ D N C
Sbjct: 2435 QHCSNPCDQFNGGCSHICAPGP-NGAECQCPQERHWYLANNNKHCIVDNGIRCNGSSFTC 2493
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKC 303
NG CI W CD DC D +DE FH C + C + +C
Sbjct: 2494 LNGH--------CILEQWKCDNSNDCG-----DGSDELESVCAFHTCHSTAFTCD-NGRC 2539
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
+ +++ CD DC DN+DE + NA E C S+ +C+ L C+G
Sbjct: 2540 VQYHYRCDHYNDCG-----DNSDEKGCLFSDCNAT----TEFTC-SNRRCIPLEFVCNGV 2589
Query: 364 PDC 366
+C
Sbjct: 2590 NNC 2592
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S R+ A+++ W D PA + + + ++E A M
Sbjct: 3898 IYWSDARSQRIEVAELDGRYRKWLISTQLDQPAAVVVNPKLGLMYWTDWGKEPKIEAAWM 3957
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G+ R+ LV +++ WP+ L IDY N D +YW D T+E+++ DG+ ++
Sbjct: 3958 DGQQRNVLVHEDLGWPTGLSIDYLNNDRIYWSDFKEKTIETIKYDGTDRRIV 4009
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 21/136 (15%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVR--LRCAQINDLLNSWDLPAPEI 101
W Y +L L+ NHR + NVS+ R + +++D L W
Sbjct: 1354 WTNY---VLQTIEVSKLDGNHRT----VLISHNVSTPRGLVLDPRVSDHLMFW-----AN 1401
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH- 160
+ R+E+A M G R+ +V + WP+ L IDY +LY+ D++L+ ++ DG H
Sbjct: 1402 WGHHPRIERASMDGSLRTVIVQDKVLWPNGLTIDYPNRLLYFLDAYLDYLDFCDYDGQHR 1461
Query: 161 ------NAVLCHPNEL 170
+ ++ HP L
Sbjct: 1462 HQVIAGDLIMRHPYAL 1477
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+E+A M G NR LV + WP+ + +D +YW DS + +E+V DG + H
Sbjct: 408 VERAFMDGTNRKDLVKTKLGWPAGITLDLVLKRVYWVDSRFDYIETVTYDGIQRKTVLH 466
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + NR+ LV++ + P L +D+N +YW D L+ + + ++G V+
Sbjct: 2000 KIERSFLDCTNRTVLVSEGVVTPRGLALDHNNGYVYWVDDTLDVISRINIEGKQLRVI 2057
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 498 NKFTETNPQVYYQSSLRPFGVTIYHSLRQPHASNPCGDNN-----GGCEQICVLSHRTDN 552
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L Y C CT G+ L DG C AV +IFSS V +R I
Sbjct: 553 DGLGYRCKCTFGFNLDVDGHHCVAVK------QFLIFSSEVAVRGI 592
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A +G ++ +V I S+V+D+ LYW + L T+E ++DG+H VL
Sbjct: 1318 KIWSALQNGTDKKVVVDSGITMTESIVVDWVGRNLYWTNYVLQTIEVSKLDGNHRTVLIS 1377
Query: 167 PN 168
N
Sbjct: 1378 HN 1379
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 37/65 (56%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ +++ G++G + ++ +I P +L +D+ D LY ++ +N ++ V +DGSH +
Sbjct: 314 VKDKVFSVGINGLDIQEVLNVSIDDPENLAVDWVNDKLYVVETKVNRIDMVNLDGSHRVI 373
Query: 164 LCHPN 168
L N
Sbjct: 374 LITEN 378
>gi|351698597|gb|EHB01516.1| Low-density lipoprotein receptor-related protein 1B, partial
[Heterocephalus glaber]
Length = 4485
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 130/400 (32%), Positives = 173/400 (43%), Gaps = 96/400 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 776 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 834
Query: 223 KCDGFVDCLE-------------------------------------DGSDEPNTCIHQC 245
CD DC + DGSDE C+H C
Sbjct: 835 LCDTEDDCGDQTDEMATCEFPTCEPLTQFVCKSGRCISSKWHYDDCGDGSDELG-CVHSC 893
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCALSKK 302
F+ Q +C+ S +CIP +W CD + DC +D+ N T E+ C + QC
Sbjct: 894 FDSQFRCS-SGRCIPGHWACDGDNDCGDFSDETQANCTKEEIQSPAGCNGNEFQCYPDGN 952
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDE----------DWDKYFSH----------------- 335
CIP W CD E DC D +DE D+ FS
Sbjct: 953 CIPDLWRCDGEKDCE-----DGSDEKGCNGTIRLCDYKTKFSCQSTGRCINKAWVCDGDI 1007
Query: 336 -----------NAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1008 DCEDQSDEEDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCD-ECSLN 1066
Query: 384 NLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CS+ CS P RG +C CP G NK C D C C Q C CSC
Sbjct: 1067 NGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSSHLKCSQVCEQHKHMVKCSC 1126
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
EG+ L PDG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1127 YEGWKLDPDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1163
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 159/370 (42%), Gaps = 60/370 (16%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2564 QNKHKCEENYFGC-PSGRCILNTWLCDGQKDCEDGLDE-LHCDSSCSWSQFACSAHKCIS 2621
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S+ C+P +WLCD E DC
Sbjct: 2622 KHWICDGEDDC-GDGLDESDSICGDVTCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 2680
Query: 272 --------------------------------STDDIVDNTDEDWD-KFHQCFNGQVQCA 298
DD D +DE + QC + +CA
Sbjct: 2681 LSTAGCAPNNTCDENTFMCHNKVCIPKQFVCDHDDDCGDASDEPLKCGYRQCGAEEFRCA 2740
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVALS 357
+ + W CD + DC D++DE NA C+ + C + +C+
Sbjct: 2741 DGRCLLNTQWQCDRDFDCP-----DHSDEAPLNPKCKNAEQSCNSSFFMC-QNGRCIPSG 2794
Query: 358 KFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
+ CD K DC +G DE N + CS C P C C G ++ KT C
Sbjct: 2795 RLCDNKDDCGDGSDERNCHINECLSKKTSGCSQDCQDLPISYKCKCWPGFQLKDDGKT-C 2853
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTV 472
VD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I +
Sbjct: 2854 VDIDECSSGFPCSQQCINTYGTYKCLCTDGYKIQPDNPNGCKSLS---DEEPFLILADHH 2910
Query: 473 DIRRIHLNGS 482
+IR+I +GS
Sbjct: 2911 EIRKISTDGS 2920
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 149/362 (41%), Gaps = 80/362 (22%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + A+ C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3419 FWCDGDFDCADGS--DERNCAISCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDERNCE 3475
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3476 PASPSCSSSEYICISGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3533
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS- 317
P WLCD DC VD +DE+ D+ + C + W+CD + DC
Sbjct: 3534 PVRWLCDGIHDC-----VDGSDEEICDRGGNICRADEFLCNNSLCKLYFWVCDGQDDCGD 3588
Query: 318 -------------------------------------TDDIVDNTDEDWDKYFSHNAVLC 340
DD DN+DED ++ A C
Sbjct: 3589 NSDESPDMCVKFLCPPTRPHRCRNNRICLQSEKPCNGVDDCGDNSDEDHCGKDTYKAKPC 3648
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNNKADCEN 384
+E C S+ +C+ + CD DC +G DE P C + A C
Sbjct: 3649 KKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRTTPTEYTCEDNVNP-CGDDAYCNQ 3706
Query: 385 LKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
+K S C C G +N QC D +ECL+ G+C Q C N H SY C C +
Sbjct: 3707 IKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSQQCINIHGSYKCVCDQ 3757
Query: 443 GY 444
+
Sbjct: 3758 NF 3759
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3204 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3262
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C +KCIP N C+ + DC D DE
Sbjct: 3263 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKKRKCIPVNLRCNGKDDCG-----DEEDER 3316
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3317 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3366
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +SN C+ CD + DCS+ DE
Sbjct: 3367 EFQCKNSN-CIPDHWRCDSQNDCSDNSDE 3394
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+C+ L C +KC+ C+C G + C D DEC + G+C QTC NTH SY C
Sbjct: 5 NCQQLNCQYKCALIRNRTRCYCEDGFEVKEDGRSCKDQDECAVYGTCSQTCVNTHGSYAC 64
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY ++P+ +SC A N P D+P ++ +++ I HLNGS
Sbjct: 65 GCAEGYIMQPNNRSCKAKNEPTDKPPMLLIANSETIEIFHLNGS 108
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C +C+ ++ C+GK DC + EDE C+P F C K CI + W
Sbjct: 3282 VCLSGQFKCTKKRKCIPVNLRCNGKDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3341
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC S CIP +W CD + DCS DN+DE
Sbjct: 3342 VCDEDPDC-ADASDEANCDKKTCGPHEFQCKNS-NCIPDHWRCDSQNDCS-----DNSDE 3394
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + A+ C
Sbjct: 3395 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCAISCSK 3442
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3443 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 3471
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 125/336 (37%), Gaps = 85/336 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 773 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 831
Query: 261 HNWLCDEEMDCS---------------------------------TDDIVDNTDEDWDKF 287
WLCD E DC DD D +DE
Sbjct: 832 RAWLCDTEDDCGDQTDEMATCEFPTCEPLTQFVCKSGRCISSKWHYDDCGDGSDE-LGCV 890
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H CF+ Q +C+ S +CIP +W CD + DC D D T + K + C+ NE +C
Sbjct: 891 HSCFDSQFRCS-SGRCIPGHWACDGDNDCG--DFSDETQANCTKEEIQSPAGCNGNEFQC 947
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA------- 380
C+ CDG+ DC +G DE C NKA
Sbjct: 948 YPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDYKTKFSCQSTGRCINKAWVCDGDI 1007
Query: 381 ---------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-LID 422
DC++ C P ++C P K C D DEC L +
Sbjct: 1008 DCEDQSDEEDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCDECSLNN 1067
Query: 423 GSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
G C C+ VCSC EG L D K+C V+
Sbjct: 1068 GGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1103
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3244 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKKRKCIPVNLR 3302
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3303 CNGKDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3356
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC S CIP +W CD + DCS DN+DE+ + C
Sbjct: 3357 NCDKKTCGPHEFQCKNS-NCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3405
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3406 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3433
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV +K CDG+ DC + DE + C +F C G CIP S +C+ VDC D SD
Sbjct: 2450 RCVPHAKLCDGEDDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNVDC-ADASD 2508
Query: 237 EPNTCIHQCFN---------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C + G ++C + C+ W+CD DC D D
Sbjct: 2509 EKNCNNTDCTHFYKLGVKTAGFIKCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2566
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + WLCD + DC D DE H C ++ C
Sbjct: 2567 HKCEENYFGCP-SGRCILNTWLCDGQKDCE-----DGLDE------LHCDSSCSWSQFAC 2614
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+++C++ CDG+ DC +G DE C + AD + + S C P
Sbjct: 2615 -SAHKCISKHWICDGEDDCGDGLDESDSICGDVTCAADMFSCQGSRACVPRHWLCDGERD 2673
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2674 CPDGSDELSTAGCAPNNT 2691
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 135/366 (36%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3010 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGSNQSVVIETRISRPMALTID 3069
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y D LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3070 YVNDRLYWADE--NHIEFSNMDGSHRNKV--PNQDIPG----VIALTLFEDYVYWTDGKT 3121
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDG- 234
++G D N+ T P+ K ++ L G
Sbjct: 3122 KSLSRAHKTSGADRLSLVNSWHTIADIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGK 3181
Query: 235 ------------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
+ + TC+ C Q +C + KCIP W CD DC
Sbjct: 3182 SHTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3240
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C +KCIP N
Sbjct: 3241 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKKRKCIPVN 3300
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3301 LRCNGKDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3350
Query: 368 NGEDEG 373
+ DE
Sbjct: 3351 DASDEA 3356
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 106/231 (45%), Gaps = 19/231 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
++ CG+ +C+ CDG P C + DE +C N C G C +C+P + CD
Sbjct: 2401 SDFECGNG-ECIGYQLTCDGTPHCKDKSDEKLLYCENRSCRRGFQPCYNRRCVPHAKLCD 2459
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ +DC S + +NTD
Sbjct: 2460 GEDDC-GDNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNVDCADASDEKNCNNTDC 2517
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ W+CD DC D +DE K N C
Sbjct: 2518 THFYKLGVKTAGFIKCNSTSLCVLPTWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 2570
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS-HKC 391
N C S +C+ + CDG+ DC +G DE C++ CS HKC
Sbjct: 2571 ENYFGC-PSGRCILNTWLCDGQKDCEDGLDE-LHCDSSCSWSQFACSAHKC 2619
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F CG G+CI CDG C + ++ C ++ Q +++C+PH LCD E
Sbjct: 2403 FECGNGECIGYQLTCDGTPHCKDKSDEKLLYCENRSCRRGFQPCYNRRCVPHAKLCDGED 2462
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2463 DCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNVDCADASDEKNCNNTD 2516
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-- 387
+F V ++C S++ CV + CDG DC + DE LKC
Sbjct: 2517 CTHFYKLGVKT-AGFIKCNSTSLCVLPTWICDGSNDCGDYSDE------------LKCPV 2563
Query: 388 --SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCTNTHLS 435
HKC G CP+G+ T D + DG CD +C+ + +
Sbjct: 2564 QNKHKCEENYFG----CPSGRCILNTWLCDGQKDCEDGLDELHCDSSCSWSQFA 2613
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D+ +LY
Sbjct: 537 VVDPVNGWMYWTDWEEDEIDASVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFQASMLY 596
Query: 143 WCDSHLNTVESVRVDGSH 160
WCD++ + +E V ++G+H
Sbjct: 597 WCDAYYDHIEKVFLNGTH 614
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNW 263
C G+F C CI W+CDG DCL+ ++P C H C + Q +C + +CIP W
Sbjct: 735 CKAGEFRCRNRHCIQARWECDGDDDCLDGSDEDPINCFNHSCPDDQFKCQ-NNRCIPKRW 793
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
LCD DC +++ D +++ C Q C + +CIP WLCD E DC D
Sbjct: 794 LCDGANDCGSNE--DESNQTCTA-RTCQVDQFSCG-NGRCIPRAWLCDTEDDCG-----D 844
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
TDE F C P S +C++ D DC +G DE
Sbjct: 845 QTDEMATCEFP----TCEPLTQFVCKSGRCISSKWHYD---DCGDGSDE 886
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 3938 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFTERIYWADFELSIIGSVLYDG 3988
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1908 IGKARLDGSEKLVLVSMGIVWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 1967
Query: 166 HPN 168
N
Sbjct: 1968 GSN 1970
>gi|351714999|gb|EHB17918.1| Low-density lipoprotein receptor-related protein 2 [Heterocephalus
glaber]
Length = 4674
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 142/304 (46%), Gaps = 25/304 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIP 219
++ CHP++ C S ++C+ LS CDG DC +G DE C CT QF C G +C+
Sbjct: 1121 SSATCHPSQFHC-SEHRCIDLSYVCDGDKDCVDGSDEAG-CVLNCTTSQFKCADGSQCLS 1178
Query: 220 ESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+++CDG DC D SDE P C + QC CIP W CD DC
Sbjct: 1179 NTYRCDGVYDC-SDNSDEAGCPTRPPGMCHTDEFQCQGDGACIPDTWECDGHPDC----- 1232
Query: 277 VDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
V +DE + C +C + CI W+CD + DC D+ D D +
Sbjct: 1233 VHGSDEHHGCVPKTCLPSHFRCD-NGNCIYKAWVCDGDNDCR--DMSDEKDCPTQPFH-- 1287
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPT 394
C + +C CV LS CDG DC NG DE P CN + N C+H+C
Sbjct: 1288 ----CPSWQWQCPGYAICVNLSALCDGVSDCPNGTDESPLCNEDSCSHFNGGCTHQCIQG 1343
Query: 395 PRGAMCFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
P GA C CP G Q N T+ C D +EC G C Q C N S+ C+C Y L DG++
Sbjct: 1344 PFGATCICPPGYQLANDTKTCEDINECDTPGFCSQLCYNLRGSFRCTCDSDYRLEDDGRT 1403
Query: 453 CTAV 456
C
Sbjct: 1404 CKVT 1407
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 154/327 (47%), Gaps = 42/327 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++L C S C+ + CD DC +G DE P C Q +C G C
Sbjct: 81 GTTCSSDQLTC-SDGHCIPRAYRCDHVQDCPDGTDERDCHYPVCE------QLTCANGAC 133
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S KCD VDC D SDE N C C N + QC + +C+P +LCD + DC
Sbjct: 134 YNTSQKCDSKVDC-RDSSDEVN-CTETCSNDEFQCG-TGECVPRPYLCDHDNDCE----- 185
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
D +DE + C Q C +CI NW+CD + DC D DED + H+
Sbjct: 186 DGSDEHNCNYETCSGNQFTCP-GGQCIHQNWVCDGQDDCP-----DFGDEDGCESNQRHH 239
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKC 391
+ C+P E C S C+++ + CDG DC GEDE G C C L C +C
Sbjct: 240 S--CYPREWPCPHSGHCISIYQVCDGISDCPRGEDENSTASGSSCGTSL-CSVLDCVFQC 296
Query: 392 SPTPRGAMCFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
TP G CFCP G QN ++T CV D+C I G CDQ C N + C C EGY +
Sbjct: 297 HKTPYGGSCFCPPGYVINQNDSRT-CVAFDDCQIWGICDQKCENRMGHHQCGCEEGYVME 355
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDI 474
+ + C A + AS+IFS+ D+
Sbjct: 356 RE-RHCRASTSFNE--ASVIFSNGRDL 379
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/367 (31%), Positives = 165/367 (44%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAE--CTPGQFSCGMGKCIPES 221
C E +C SS +CV L FCD + DCS+G DE C +AE C +F C G+CIP +
Sbjct: 2841 CSSTEFQCVSSRRCVPLHWFCDEEADCSDGSDEPSSCAHAERTCQGSEFKCDGGRCIPRN 2900
Query: 222 WKCDGFVDCLE-DGSDEPNTCIHQ-CFNGQVQCALS----KKCIPHNWLCDEEMD----- 270
W CDG DC + DE + C Q C + + C S +KCIP +W+CD + D
Sbjct: 2901 WICDGDNDCGDMSDEDERHHCEQQTCSSSEFHCVNSRPPARKCIPRSWVCDGDADCIDAL 2960
Query: 271 ----------CSTDDIV--------------------DNTDEDWDKFHQCFNGQVQCALS 300
CS D+ D +DE + C Q C +
Sbjct: 2961 DEHQNCTRRSCSADEFTCNNGLCVLQSFRCDWRNDCGDYSDERECSYPACQENQFTCQ-N 3019
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCGSSNQCVALSKF 359
+CI ++CD + DC D +DE ++ H C P++ +C + C+ ++K
Sbjct: 3020 GRCINKAFVCDHDNDCG-----DESDE--QEHLCHALQPTCPPHQFKC-DNGHCIEMTKV 3071
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C H C+ T C C G +K CVD
Sbjct: 3072 CNHLDDCSDNSDEKGCGINECQDHSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDI 3131
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C+Q C N SY+C C GY PDGK+C + D +IFS+ +R
Sbjct: 3132 DECKETPYVCNQKCENEVGSYICKCAPGYIREPDGKTCRQNS---DIEPYLIFSNRYYLR 3188
Query: 476 RIHLNGS 482
+ ++GS
Sbjct: 3189 NLTIDGS 3195
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 112/243 (46%), Gaps = 34/243 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C ++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3490 CSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDEPALCPHRFCRLGQFQCRDGNCTSPQAL 3549
Query: 224 CDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE T H C Q QCA +K+CIP +W CD DC +DN+D
Sbjct: 3550 CNAQEDC-NDGSDEDRTLCANHHCEVYQWQCA-NKRCIPESWQCDSVNDC-----LDNSD 3602
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C GQ +C + +CIP +W CD + DC D +DE + S
Sbjct: 3603 EDSSHCASRTCRPGQFRCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIHECMSAAHRC 3656
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHK 390
+ E C ++ +C+ C+G DC + DE CE L C +H+
Sbjct: 3657 DNHTEFSCKTNYRCIPQWAVCNGANDCRDNSDE-------QGCEALTCNPSGDFRCKNHQ 3709
Query: 391 CSP 393
C P
Sbjct: 3710 CIP 3712
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 157 DGSHNAVLCHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQF 210
DGS LC R G C + C+ + DC++G DE N C Q+
Sbjct: 3518 DGSDEPALCPHRFCRLGQFQCRDGNCTSPQALCNAQEDCNDGSDEDRTLCANHHCEVYQW 3577
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEM 269
C +CIPESW+CD DCL++ ++ + C + C GQ +C + +CIP +W CD +
Sbjct: 3578 QCANKRCIPESWQCDSVNDCLDNSDEDSSHCASRTCRPGQFRCN-NGRCIPQSWKCDVDN 3636
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNG--------QVQCALSKKCIPHNWLCDEEMDCSTDDI 321
DC D +DE H+C + + C + +CIP +C+ DC
Sbjct: 3637 DCG-----DYSDE---PIHECMSAAHRCDNHTEFSCKTNYRCIPQWAVCNGANDCR---- 3684
Query: 322 VDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE A+ C+P+ + RC ++QC+ L CDG DC + DE
Sbjct: 3685 -DNSDEQ-----GCEALTCNPSGDFRC-KNHQCIPLRWKCDGYDDCGDSSDE 3729
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 130/331 (39%), Gaps = 76/331 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N+S +++ + WP+++ IDY D+LYW D+HL +E ++G H +
Sbjct: 3324 IGRVGMDGANKSVIISTKLSWPNAITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDG 3383
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+L HP L + S++ V ++ P
Sbjct: 3384 ILPHPYALTVFENTIYWTDWNTRTVEKGNKYDGSDRVVLVNTTHRPFDIHVYHPYRQPIV 3443
Query: 202 NAECTPGQFSCG---MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
N C C + K + C+ D + C+ C + Q CA ++KC
Sbjct: 3444 NNPCGTNNGGCSHLCLIKAGGNGFTCECPDDFQTLRLSDRTLCLPACSSTQFLCANNEKC 3503
Query: 259 IPHNWLCDEEMDCS-----------------------------------TDDIVDNTDED 283
IP W CD + DCS +D D +DED
Sbjct: 3504 IPIWWKCDGQKDCSDGSDEPALCPHRFCRLGQFQCRDGNCTSPQALCNAQEDCNDGSDED 3563
Query: 284 WD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
H C Q QCA +K+CIP +W CD DC +DN+DED S C
Sbjct: 3564 RTLCANHHCEVYQWQCA-NKRCIPESWQCDSVNDC-----LDNSDEDSSHCASRT---CR 3614
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P + RC ++ +C+ S CD DC + DE
Sbjct: 3615 PGQFRC-NNGRCIPQSWKCDVDNDCGDYSDE 3644
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 142/372 (38%), Gaps = 100/372 (26%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGM-GKCIPESWKCDGFVDC 230
S+ +CV + CDG DC + DE N C+P F+CG G+CIP W+CD DC
Sbjct: 1009 SNGRCVPIYYRCDGVDDCHDNSDEHQCGTSNNTCSPLAFTCGHGGECIPGPWRCDRHNDC 1068
Query: 231 LEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---------------- 271
+ DGSDE P+ C + C + C+P +W+CD + DC
Sbjct: 1069 V-DGSDEQNCPSQAPSTCPSSYYTCD-NNHCVPRDWVCDTDNDCGDGSDEKNCNSSATCH 1126
Query: 272 -------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
D VD +DE + C Q +CA +C+ + + CD
Sbjct: 1127 PSQFHCSEHRCIDLSYVCDGDKDCVDGSDEAGCVLN-CTTSQFKCADGSQCLSNTYRCDG 1185
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DCS DN+DE + +CH +E +C C+ + CDG PDC +G DE
Sbjct: 1186 VYDCS-----DNSDEAGCP--TRPPGMCHTDEFQCQGDGACIPDTWECDGHPDCVHGSDE 1238
Query: 373 GPFCNNKA------DCENLKCSHKC-----------------SPT------------PRG 397
C K C+N C +K PT P
Sbjct: 1239 HHGCVPKTCLPSHFRCDNGNCIYKAWVCDGDNDCRDMSDEKDCPTQPFHCPSWQWQCPGY 1298
Query: 398 AMCF-----------CPAGQNPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYT 445
A+C CP G +++ + D C +G C C C C GY
Sbjct: 1299 AICVNLSALCDGVSDCPNGT--DESPLCNEDSCSHFNGGCTHQCIQGPFGATCICPPGYQ 1356
Query: 446 LRPDGKSCTAVN 457
L D K+C +N
Sbjct: 1357 LANDTKTCEDIN 1368
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 104/255 (40%), Gaps = 64/255 (25%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S CD DC +G DE C +F+CG G+CIP + C+G +C ++GS
Sbjct: 2729 KCIRYSYRCDYYKDCDDGSDERGCMFRNCNDTTEFTCGNGRCIPLEFVCNGIDNCHDNGS 2788
Query: 236 DEPNTC-------------------------------------------IHQCFNGQVQC 252
+ C H C + + QC
Sbjct: 2789 SDERNCPERTCPSGYTKCQNSNICISRLYLCDGDNDCGDMSDENPTYCSTHTCSSTEFQC 2848
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWL 309
S++C+P +W CDEE DCS D +DE H C + +C +CIP NW+
Sbjct: 2849 VSSRRCVPLHWFCDEEADCS-----DGSDEPSSCAHAERTCQGSEFKCD-GGRCIPRNWI 2902
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS----NQCVALSKFCDGKPD 365
CD + DC D +DED + C +E C +S +C+ S CDG D
Sbjct: 2903 CDGDNDCG-----DMSDEDERHHCEQQT--CSSSEFHCVNSRPPARKCIPRSWVCDGDAD 2955
Query: 366 CSNGEDEGPFCNNKA 380
C + DE C ++
Sbjct: 2956 CIDALDEHQNCTRRS 2970
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 104/244 (42%), Gaps = 61/244 (25%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
++ +C+ S CD DC + DE + C PGQF C G+CIP+SWKCD DC
Sbjct: 3580 ANKRCIPESWQCDSVNDCLDNSDEDSSHCASRTCRPGQFRCNNGRCIPQSWKCDVDNDC- 3638
Query: 232 EDGSDEPNTCIHQCFNG--------QVQCALSKKCIPHNWLCDEEMDC------------ 271
D SDEP IH+C + + C + +CIP +C+ DC
Sbjct: 3639 GDYSDEP---IHECMSAAHRCDNHTEFSCKTNYRCIPQWAVCNGANDCRDNSDEQGCEAL 3695
Query: 272 -----------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
DD D++DE+ +C + +C ++CIP W
Sbjct: 3696 TCNPSGDFRCKNHQCIPLRWKCDGYDDCGDSSDEENCAPRECTESEFRCT-DQQCIPSQW 3754
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD+E DC DN+DE CHP +C +S C+ CDG+ DC +
Sbjct: 3755 VCDQENDCG-----DNSDER-----DCELKTCHPEHFQC-TSGHCIPNELKCDGRADCLD 3803
Query: 369 GEDE 372
DE
Sbjct: 3804 ASDE 3807
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 83/175 (47%), Gaps = 22/175 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F+C G+C+P ++CDG DC D SDE T + C C +CIP
Sbjct: 1000 QCGSFSFACSNGRCVPIYYRCDGVDDC-HDNSDEHQCGTSNNTCSPLAFTCGHGGECIPG 1058
Query: 262 NWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD DC VD +DE C + C + C+P +W+CD + DC
Sbjct: 1059 PWRCDRHNDC-----VDGSDEQNCPSQAPSTCPSSYYTCD-NNHCVPRDWVCDTDNDCG- 1111
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE +++ CHP++ C S ++C+ LS CDG DC +G DE
Sbjct: 1112 ----DGSDEK----NCNSSATCHPSQFHC-SEHRCIDLSYVCDGDKDCVDGSDEA 1157
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 131/332 (39%), Gaps = 60/332 (18%)
Query: 162 AVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A+ C+P+ + RC ++QC+ L CDG DC + DE ECT +F C +CIP
Sbjct: 3694 ALTCNPSGDFRC-KNHQCIPLRWKCDGYDDCGDSSDEENCAPRECTESEFRCTDQQCIPS 3752
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CD DC D SDE + + C QC S CIP+ CD DC +D +
Sbjct: 3753 QWVCDQENDC-GDNSDERDCELKTCHPEHFQCT-SGHCIPNELKCDGRADC-----LDAS 3805
Query: 281 DED-----------------------------------------WDKFHQCFNGQVQCAL 299
DE ++ H CF+ +
Sbjct: 3806 DESTCPTRFPNGTYCPAALFECKNHVCVQSYFICDGDDDCGDGSDEELHLCFSVACEPPH 3865
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+C L ++ DD D TDE + C NE +C S N C++
Sbjct: 3866 RFRCDNSRCLYSHQLCNGVDDCGDGTDEKEEHCRKPTPKPCTENEFKCSSGN-CISQHYI 3924
Query: 360 CDGKPDCSNGEDEGPFCNNKAD---CENLKCSHKCSPTPRGA-MCFCPAGQNP---NKTQ 412
CD DC + DE CN D ENL C C+ G +C C G ++
Sbjct: 3925 CDDIDDCGDLSDETG-CNIGKDRTCAENL-CEQNCTQLSEGGFICSCRTGYKAGASDRNS 3982
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
C D +EC G C Q C NT SY C C +G+
Sbjct: 3983 CQDINECEEFGICPQNCRNTKGSYECFCADGF 4014
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 126/342 (36%), Gaps = 84/342 (24%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-ESVRVDGSHNAVL 164
+++E++ + G NR +++ S + +YW D + + + DGS +
Sbjct: 2549 QKIERSTLTGMNREVIISSIFH---SFGLTLYGQYIYWTDFFAKKIYRASKYDGSGQMAV 2605
Query: 165 CHPNELRCGS------------SNQCVALSKFCDG--KPDCSNGE------------DEG 198
+R SN C + C P S E ++
Sbjct: 2606 TTTLPVRPKGICTVKKDQNQNCSNPCDQFNGGCSHICVPGPSGAECLCPHEGQWYLANDN 2665
Query: 199 PFC-----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQ 251
FC A C QF+C G CI E WKCD DC DGSDE H C
Sbjct: 2666 KFCIEDTGGARCENSQFTCLNGHCIQEQWKCDADNDC-GDGSDELEIVCAFHTCPLTAFT 2724
Query: 252 CALSKKCIPHNWLCDEEMDC-----------------------------------STDDI 276
C + KCI +++ CD DC D+
Sbjct: 2725 CD-NGKCIRYSYRCDYYKDCDDGSDERGCMFRNCNDTTEFTCGNGRCIPLEFVCNGIDNC 2783
Query: 277 VDN--TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN +DE C +G +C S CI +LCD + DC D +DE+ +
Sbjct: 2784 HDNGSSDERNCPERTCPSGYTKCQNSNICISRLYLCDGDNDCG-----DMSDENPTYCST 2838
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
H C E +C SS +CV L FCD + DCS+G DE C
Sbjct: 2839 HT---CSSTEFQCVSSRRCVPLHWFCDEEADCSDGSDEPSSC 2877
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 121/298 (40%), Gaps = 59/298 (19%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++EKA + G R P+V ++ WPS+L +DY ++LYW D+ L +E + G + V+
Sbjct: 2507 QIEKATLGGNFRIPIVNTSLVWPSALTLDYELNLLYWVDTSLQKIERSTLTGMNREVIIS 2566
Query: 166 ---HPNELRC----------------------GSSNQCVALSKFCDGKPDCSNGEDEGPF 200
H L GS V + K C+ +D+
Sbjct: 2567 SIFHSFGLTLYGQYIYWTDFFAKKIYRASKYDGSGQMAVTTTLPVRPKGICTVKKDQNQN 2626
Query: 201 CNAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDG----SDEPNTCIH-----QCFNGQV 250
C+ C QF+ G C+P + C +G +++ CI +C N Q
Sbjct: 2627 CSNPCD--QFNGGCSHICVPGPSGAECL--CPHEGQWYLANDNKFCIEDTGGARCENSQF 2682
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
C L+ CI W CD + DC D +DE FH C C + KCI +++
Sbjct: 2683 TC-LNGHCIQEQWKCDADNDCG-----DGSDELEIVCAFHTCPLTAFTCD-NGKCIRYSY 2735
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
CD DC D +DE + + N E CG+ +C+ L C+G +C
Sbjct: 2736 RCDYYKDCD-----DGSDERGCMFRNCNDT----TEFTCGNG-RCIPLEFVCNGIDNC 2783
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 19/118 (16%)
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE--------------IFPLDE----R 107
N L I + + R+ A+++ W + + +F D+ +
Sbjct: 4171 NPKLGHIYWSDAKNQRIEVARLDGRYRKWLITTTQNQPAAIVVNPKLGLVFWTDQGKEPK 4230
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E A M+GE+RS LV++++ WP+ L IDY N D +YW DS + +E++R DG+ V+
Sbjct: 4231 IESAWMNGEHRSILVSEDLGWPNGLSIDYLNNDRIYWSDSKEDVIETIRYDGTDRRVI 4288
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 111/298 (37%), Gaps = 70/298 (23%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + + QC S++C+P +W CDEE DCS D +DE
Sbjct: 2839 HTCSSTEFQCVSSRRCVPLHWFCDEEADCS-----DGSDE-------------------- 2873
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLE-------KA 111
S C ++ +C + +W D ++ DER +
Sbjct: 2874 ----PSSCAHAERTCQGSEFKCDGGRCIPRNWICDGDNDCGDMSDEDERHHCEQQTCSSS 2929
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
H N P K I P S V D + D + D H N C +E
Sbjct: 2930 EFHCVNSRPPARKCI--PRSWVCDGDADCIDALDEHQNCTRRS----------CSADEFT 2977
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
C ++ CV S CD + DC + DE C QF+C G+CI +++ CD DC
Sbjct: 2978 C-NNGLCVLQSFRCDWRNDCGDYSDERECSYPACQENQFTCQNGRCINKAFVCDHDNDC- 3035
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE----EMDC---STDDIVDNTDE 282
D SDE H AL C PH + CD EM DD DN+DE
Sbjct: 3036 GDESDEQEHLCH---------ALQPTCPPHQFKCDNGHCIEMTKVCNHLDDCSDNSDE 3084
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + ++E+A M G NR LV + WP+ + +D +YW DS + +E+V DG
Sbjct: 505 ESLSGEPKVERAFMDGSNRKDLVKTKLGWPAGITLDLLAKRIYWVDSRFDYIETVTYDGL 564
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 565 QRKTVLHGGSL 575
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V + I WP L +DY ++Y+ D++L+ ++ +G H
Sbjct: 1554 RIERASMDGTLRTVIVQEKIYWPCGLTVDYPNRLIYFMDAYLDYLDFCDYNGQHRRQVIA 1613
Query: 161 -NAVLCHPNEL 170
N +L HP L
Sbjct: 1614 GNLILRHPYAL 1624
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + NR+ LV+ I P L +D++ D +YW D L+ + + ++G + V+
Sbjct: 2190 KIERSFLDCTNRTVLVSDGIVTPRGLAVDHSNDYIYWVDDSLDIIARIHLNGGESEVV 2247
>gi|327263592|ref|XP_003216603.1| PREDICTED: very low-density lipoprotein receptor-like [Anolis
carolinensis]
Length = 848
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 166/365 (45%), Gaps = 68/365 (18%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C E+ CG S++C+ +S CDG+ DC +G DE N C+P +F+C G+CI + +
Sbjct: 110 CLLGEISCGPRSSRCIPVSWRCDGENDCGDGTDEDDCANITCSPEEFTCANGRCISKDFA 169
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G DC DGSDE C G+ QC + S CIP NW+CD E DC+ D D + E
Sbjct: 170 CNGQEDC-SDGSDEAGCAAPTCKVGEFQCKSESDSCIPVNWVCDSEPDCT--DWSDESPE 226
Query: 283 DWDK----FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ +C ++ C +C W CD + DC D +DE + +
Sbjct: 227 QCGRQPVLTVKCGESEMLCDSGDECFHKKWRCDGDTDCK-----DGSDE-----INCPSR 276
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP-------------- 374
C P++ +C N C+ ++ C+G DC +G DE GP
Sbjct: 277 TCRPDQFKCEDGN-CIHGTRQCNGVRDCIDGSDEVNCQTVNQCSGPGKFRCRSGECIDSS 335
Query: 375 -FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCV 414
CN K DC+ N CSH C G C CPAG Q ++ C
Sbjct: 336 KVCNQKQDCKDWSDEPLKQCNINECLVNNGGCSHICKDLVIGFECDCPAGFQLIDRKTCG 395
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
D DEC G C Q C NT L Y C C+ GY + C A+ EP S++F++ +I
Sbjct: 396 DIDECQNPGICSQICINTKLGYKCECSRGYRMDAQTGVCKAIG---GEP-SLLFTNHWNI 451
Query: 475 RRIHL 479
R+ L
Sbjct: 452 RQFAL 456
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 122/260 (46%), Gaps = 22/260 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C N+ +C + +C+ L CDG DCS+G DE C+P F C G+CIP W
Sbjct: 28 VTCDENQFQC-HNGRCITLVWRCDGDEDCSDGSDELNCVKKTCSPSDFVCQNGQCIPSRW 86
Query: 223 KCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + +C G++ C S +CIP +W CD E DC D
Sbjct: 87 HCDGDTDC-EDGSDEHSELCYTRKCLLGEISCGPRSSRCIPVSWRCDGENDCG-----DG 140
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
TDED C + CA + +CI ++ C+ + DCS D +DE A
Sbjct: 141 TDEDDCANITCSPEEFTCA-NGRCISKDFACNGQEDCS-----DGSDE-----AGCAAPT 189
Query: 340 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C E +C S S+ C+ ++ CD +PDC++ DE P + +KC G
Sbjct: 190 CKVGEFQCKSESDSCIPVNWVCDSEPDCTDWSDESPEQCGRQPVLTVKCGESEMLCDSGD 249
Query: 399 MCFCPAGQNPNKTQCVDADE 418
CF + T C D +
Sbjct: 250 ECFHKKWRCDGDTDCKDGSD 269
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R PLVT +I+ PS + +D ++ LYW D+ L+ + SV ++G ++ H
Sbjct: 582 KIEKAGMNGLDRQPLVTTDIERPSGIALDLVKNRLYWVDAKLHKLSSVDLNGQDRRIILH 641
Query: 167 PNEL 170
+E
Sbjct: 642 SHEF 645
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C +E+ C S ++C CDG DC +G DE + C P QF C G CI +
Sbjct: 235 TVKCGESEMLCDSGDECFHKKWRCDGDTDCKDGSDEINCPSRTCRPDQFKCEDGNCIHGT 294
Query: 222 WKCDGFVDCLEDGSDEPN-TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
+C+G DC+ DGSDE N ++QC G+ +C S +CI + +C+++ DC
Sbjct: 295 RQCNGVRDCI-DGSDEVNCQTVNQCSGPGKFRCR-SGECIDSSKVCNQKQDC 344
>gi|301609344|ref|XP_002934223.1| PREDICTED: very low-density lipoprotein receptor [Xenopus
(Silurana) tropicalis]
Length = 868
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 125/376 (33%), Positives = 172/376 (45%), Gaps = 71/376 (18%)
Query: 157 DGS-HNAVLCH-----PNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS A LCH E+ CG+ S QC+ LS CDG+ DC N EDE N C+P +
Sbjct: 97 DGSDETAELCHMRTCRATEISCGARSTQCIPLSWKCDGESDCPNAEDEENCGNITCSPAE 156
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C G+CI ++ C+G DC DGSDE N C + QC S CIP NW+CD++
Sbjct: 157 FTCSSGRCISSTFVCNGQNDC-SDGSDEENCVPPTCGAHEFQCKNS-SCIPLNWVCDDDS 214
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC+ +D+ ++ +C ++ C S +CI W CD + DC D +DE
Sbjct: 215 DCADHSDESLEQCGRQPIAPQKCSANEMPCG-SGECIHKKWRCDGDPDCK-----DKSDE 268
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ + C P++ +C N C+ S+ CDG DC +G DE GP
Sbjct: 269 -----MNCPSRTCQPDQFKCEDGN-CIHGSRQCDGVRDCLDGTDEIRCKNVNQCSGPGKF 322
Query: 375 ------------FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPA 404
CN + DC+ N CSH C G C C A
Sbjct: 323 KCRSGECIDIAKVCNKQKDCKDWSDEPIKECYVNECEVNNGGCSHLCHNLVIGYECDCTA 382
Query: 405 G-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G + ++ C D DEC C Q C N Y C C++GY + P C AV EP
Sbjct: 383 GFKLIDRKTCGDIDECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVG---REP 439
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIR++ L
Sbjct: 440 C-LIFTNRRDIRKVGL 454
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 110/249 (44%), Gaps = 48/249 (19%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
LC ++ +C + + +L K CDG DCS+G DE C F C G C+P W
Sbjct: 29 TLCEGSQFQCANGHCITSLWK-CDGDEDCSDGSDESSCVKKTCAETDFVCNNGLCVPRRW 87
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDC-------- 271
+CDG DC EDGSDE H C ++ C A S +CIP +W CD E DC
Sbjct: 88 ECDGDPDC-EDGSDETAELCHMRTCRATEISCGARSTQCIPLSWKCDGESDCPNAEDEEN 146
Query: 272 --------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D D +DE+ C + QC S CIP
Sbjct: 147 CGNITCSPAEFTCSSGRCISSTFVCNGQNDCSDGSDEENCVPPTCGAHEFQCKNS-SCIP 205
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGK 363
NW+CD++ DC+ D++DE ++ C NE+ CGS +C+ CDG
Sbjct: 206 LNWVCDDDSDCA-----DHSDESLEQCGRQPIAPQKCSANEMPCGSG-ECIHKKWRCDGD 259
Query: 364 PDCSNGEDE 372
PDC + DE
Sbjct: 260 PDCKDKSDE 268
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R VT ++Q PS + ID + LYW DS L+T+ SV ++G V+
Sbjct: 580 KIEKAGMNGIDRQQFVTADVQRPSGIAIDVVKSRLYWVDSKLHTLSSVDLNGLDRRVILK 639
Query: 167 PNEL 170
+E
Sbjct: 640 SHEF 643
>gi|326678476|ref|XP_693526.5| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Danio rerio]
Length = 2928
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 157/321 (48%), Gaps = 35/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+++ CD + DC +G DE C C+ QF C GKCIPE W CDG DC D
Sbjct: 952 TNGKCISVKWHCDSEDDCGDGSDE-VGCVHACSVAQFQCSSGKCIPEHWMCDGDNDC-GD 1009
Query: 234 GSDEPNTC-------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---D 283
SDE TC I+ C + C CIP W CD + DC D +DE +
Sbjct: 1010 LSDENATCSRTAISAINDCSEKEFHCRGDGTCIPEIWRCDGDKDCE-----DGSDEFACE 1064
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
K + C +S KC+ +W+CD ++DC D +DE+ +C P
Sbjct: 1065 GAKRMCDPKAKFTCKVSGKCVSKDWVCDGDIDCE-----DQSDEE-----GCEVSVCKPP 1114
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
+ C + ++ C+ + C+G DC++ DEGP+C ++ CSH+CS P +G +C
Sbjct: 1115 KFPCANDTSVCLPPERICNGWKDCADHSDEGPYC-DECSIRKGGCSHECSVAPGKGVVCS 1173
Query: 402 CPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CPAG + C D C C Q C + CSC G++L DG SC + +
Sbjct: 1174 CPAGFQLGSDAQTCEILDYCSKHLRCSQVCEQHKNTVKCSCYPGWSLGSDGDSCYSTDPF 1233
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ A IIFS +IRRI+L+
Sbjct: 1234 E---AFIIFSIRHEIRRINLH 1251
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 8/192 (4%)
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
+ CA C+ +WLCD E+DC D +DE V C N ++C + +C
Sbjct: 3 EFLCADGLNCVSESWLCDGEIDCP-----DASDEAPAICLRQVKVRCPVNNIQCLGTRRC 57
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG--QNPNK 410
V SK CDG DC +G DEG C C+ +C C G CFC G + +
Sbjct: 58 VHFSKLCDGVRDCEDGYDEGVHCRELVRSCQERRCQFDCVVMRNGTSCFCGEGFEVDEDG 117
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
+C D DEC G+C Q C NT SY C+CT+G++L+ + +SC A P D+P ++ ++
Sbjct: 118 RRCRDHDECRDYGTCSQICMNTQGSYRCACTDGFSLQANRRSCKAKTDPGDKPPVLLTTN 177
Query: 471 TVDIRRIHLNGS 482
I ++LNGS
Sbjct: 178 LNFISVLYLNGS 189
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 102/218 (46%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C C S N C++ CDG+ DC +G DE C++ C QF+C KCI + W C
Sbjct: 2660 CEDGHFACPSGN-CISSVWLCDGQKDCEDGADEFQ-CDSSCLWNQFACSKNKCISKQWLC 2717
Query: 225 DGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DG DC DG DE C G C S C+ NWLCD E DC D +DE
Sbjct: 2718 DGEDDC-GDGLDESQEICGSASCSPGLFSCPGSYACVSRNWLCDGERDCP-----DGSDE 2771
Query: 283 DWDKF----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ C + QC ++ CIP ++CD + DC D +DE + +
Sbjct: 2772 LALAGCAPNNTCTDSTFQCR-NQNCIPRRFVCDHDDDCG-----DASDESLECEYR---- 2821
Query: 339 LCHPNELRCGSSNQCVALSKF-CDGKPDCSNGEDEGPF 375
LC E RC + +C+ +++ CDG PDC + DE P
Sbjct: 2822 LCKEEEFRC-ADGRCLLRAQWECDGFPDCQDQSDELPL 2858
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 93/208 (44%), Gaps = 28/208 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV+ +FC+G DC + DE N+ C + C G CIP S C+ +DC D SD
Sbjct: 2538 RCVSNQRFCNGVNDCGDNSDEVYCNNSSCLSSEHRCADGSCIPTSSWCNQIIDC-ADASD 2596
Query: 237 EPN----TCIHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
E + C+ G + C + C+ +W+CD DC D D T
Sbjct: 2597 EKSCNNTDCMGYYRLGARASNTERFLSCNSTSLCVHPSWICDGANDCG--DYADETHCHA 2654
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H C +G C S CI WLCD + DC D DE F ++ C N+
Sbjct: 2655 SAVHTCEDGHFACP-SGNCISSVWLCDGQKDCE-----DGADE-----FQCDSS-CLWNQ 2702
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C S N+C++ CDG+ DC +G DE
Sbjct: 2703 FAC-SKNKCISKQWLCDGEDDCGDGLDE 2729
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 98/228 (42%), Gaps = 42/228 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-------- 216
C +E RC + C+ S +C+ DC++ DE N +C G + G
Sbjct: 2566 CLSSEHRC-ADGSCIPTSSWCNQIIDCADASDEKSCNNTDCM-GYYRLGARASNTERFLS 2623
Query: 217 ------CIPESWKCDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDE 267
C+ SW CDG DC D +DE + + +H C +G C S CI WLCD
Sbjct: 2624 CNSTSLCVHPSWICDGANDC-GDYADETHCHASAVHTCEDGHFACP-SGNCISSVWLCDG 2681
Query: 268 EMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC ++ D+F C Q C+ KCI WLCD E DC D
Sbjct: 2682 QKDC---------EDGADEFQCDSSCLWNQFACS-KNKCISKQWLCDGEDDCG-----DG 2726
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + S + C P C S CV+ + CDG+ DC +G DE
Sbjct: 2727 LDESQEICGSAS---CSPGLFSCPGSYACVSRNWLCDGERDCPDGSDE 2771
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/249 (32%), Positives = 106/249 (42%), Gaps = 50/249 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPESW 222
C P E +C + +C+ +S CDG DCS+G DE P N C QF C +CIP+ W
Sbjct: 821 CSPAEFQC-QNQRCIQISWKCDGDDDCSDGSDEDPLLCSNRICPADQFKCLNNRCIPKRW 879
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWL----------CDEEMDC 271
CDG DC + + TC Q C GQ CA + +CIP NW DE C
Sbjct: 880 LCDGTDDCGSNEDESNRTCSAQTCQPGQFPCA-NGRCIPENWRCDRDDDCGDQSDESSSC 938
Query: 272 --------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
S DD D +DE H C Q QC+ S KCIP
Sbjct: 939 DFPTCEPLTQFGCTNGKCISVKWHCDSEDDCGDGSDE-VGCVHACSVAQFQCS-SGKCIP 996
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC D +DE+ + + + C E C C+ CDG
Sbjct: 997 EHWMCDGDNDCG-----DLSDENATCSRTAISAINDCSEKEFHCRGDGTCIPEIWRCDGD 1051
Query: 364 PDCSNGEDE 372
DC +G DE
Sbjct: 1052 KDCEDGSDE 1060
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 85 AQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI 140
A + D LN W D E+ R+EKA M G +R VT N+ WP+ L +D++ +
Sbjct: 621 AIVVDPLNGWMYWTDWEEDELIDSRGRIEKAWMDGSHRQIFVTSNMLWPNGLTLDHSSSV 680
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
+YWCD++ + +E + ++GSH V+ EL
Sbjct: 681 MYWCDAYYDHIEKIYLNGSHRTVVYSGKEL 710
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 113/252 (44%), Gaps = 37/252 (14%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHN 262
C+P +F C +CI SWKCDG DC + ++P C ++ C Q +C L+ +CIP
Sbjct: 820 RCSPAEFQCQNQRCIQISWKCDGDDDCSDGSDEDPLLCSNRICPADQFKC-LNNRCIPKR 878
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
WLCD TDD N DE C GQ CA + +CIP NW CD + DC
Sbjct: 879 WLCD-----GTDDCGSNEDESNRTCSAQTCQPGQFPCA-NGRCIPENWRCDRDDDCGDQS 932
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D+ S + C P ++ +C+++ CD + DC +G DE
Sbjct: 933 ---------DESSSCDFPTCEPLTQFGCTNGKCISVKWHCDSEDDCGDGSDE-------- 975
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
+ C H CS A C +G+ P C ++C + TC+ T +S +
Sbjct: 976 ----VGCVHACSV----AQFQCSSGKCIPEHWMCDGDNDCGDLSDENATCSRTAISAIND 1027
Query: 440 CTEG-YTLRPDG 450
C+E + R DG
Sbjct: 1028 CSEKEFHCRGDG 1039
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 65/158 (41%), Gaps = 6/158 (3%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC----NAECTPGQFSCGMGKCIPE 220
C P C S CV+ + CDG+ DC +G DE N CT F C CIP
Sbjct: 2739 CSPGLFSCPGSYACVSRNWLCDGERDCPDGSDELALAGCAPNNTCTDSTFQCRNQNCIPR 2798
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD DC D SDE C ++ C + +CA + + W CD DC
Sbjct: 2799 RFVCDHDDDC-GDASDESLECEYRLCKEEEFRCADGRCLLRAQWECDGFPDCQDQSDELP 2857
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+ NG V + +C+P +C++ DC
Sbjct: 2858 LNPKCSAAESLCNGTVFMCANGRCVPLGSVCNQHDDCG 2895
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G+CI CDG C + ++ C ++ C +G C +++C+ + C+
Sbjct: 2490 EFQCGNGECIDYQLTCDGIAHCKDRSDEKMQYCENRNCRHGFKSC-YNQRCVSNQRFCNG 2548
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC DN+DE + C + + +CA CIP + C++ +DC+ D +
Sbjct: 2549 VNDCG-----DNSDEVYCNNSSCLSSEHRCA-DGSCIPTSSWCNQIIDCADASDEKSCNN 2602
Query: 327 EDWDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D Y+ A + L C S++ CV S CDG DC + DE
Sbjct: 2603 TDCMGYYRLGARASNTERFLSCNSTSLCVHPSWICDGANDCGDYADE 2649
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ +V + P+++ +D + ++YW D++L+ +E V +G + +
Sbjct: 317 KVERCNMDGTNRTKIVEYKTEQPTAVTLDLVKKLVYWSDAYLDFIEVVDYNGKNRQTIVQ 376
Query: 167 PNEL 170
N +
Sbjct: 377 GNSV 380
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 209 QFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNW 263
+F C G C+ ESW CDG +DC + + P C+ Q C +QC +++C+ +
Sbjct: 3 EFLCADGLNCVSESWLCDGEIDCPDASDEAPAICLRQVKVRCPVNNIQCLGTRRCVHFSK 62
Query: 264 LCDEEMDC 271
LCD DC
Sbjct: 63 LCDGVRDC 70
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++ + G +S LV+ + P+ + IDY ++ LYWCD+ N +E + ++
Sbjct: 1996 ISRSRLDGSEQSVLVSTGLARPNGVSIDYQENKLYWCDARNNKIERINLE 2045
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-----CNAECTPGQFSC-GMGKCIPESW 222
E C CV+ S CDG+ DC + DE P C C G +C+ S
Sbjct: 3 EFLCADGLNCVSESWLCDGEIDCPDASDEAPAICLRQVKVRCPVNNIQCLGTRRCVHFSK 62
Query: 223 KCDGFVDCLEDGSDEPNTC 241
CDG DC EDG DE C
Sbjct: 63 LCDGVRDC-EDGYDEGVHC 80
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
V C N ++C + +CV SK CDG DC +G DEG C
Sbjct: 42 VRCPVNNIQCLGTRRCVHFSKLCDGVRDCEDGYDEGVHC 80
>gi|535346|gb|AAB60217.1| vitellogenin receptor [Drosophila melanogaster]
gi|1095169|prf||2107325A vitellogenin receptor
Length = 1984
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATLRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C+H+ + LS +C+ + +CD +E++C T
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMHRCLSGQCLDRSLVCDGHNDCGDKSDELNCGT 1234
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D++ +C G+ +C +
Sbjct: 1235 DSSTMNISCAEDQYQCTSNLKICLPSAVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1294
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ + ++ + +S ++ C P+ C +CV
Sbjct: 1295 ECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDC-QDGECV 1353
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1354 DLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1413
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1414 KSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1469
Query: 471 TVDIRRI 477
++R +
Sbjct: 1470 FNEVRNL 1476
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC + DE C P F C G C+ C+G +C G
Sbjct: 102 CILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 160
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD DC+ +D++
Sbjct: 161 EDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGC 220
Query: 280 TDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 221 KQAEITCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDERG------C 262
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCS 392
LC P + C + C+ LS+ CDG DCS+G DE C++K DC+ KC+ KC
Sbjct: 263 LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCH 322
Query: 393 PTP-RGAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA CFCP G K + C D DEC D C Q C NT Y C C GY L
Sbjct: 323 MMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDK 382
Query: 449 DGKSCTAVNV-PQDEPASIIFSSTVDIRRIHLN 480
D ++C AV +++ +++++ + I +HL
Sbjct: 383 DNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 28/183 (15%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN---TCIHQ----CFNGQVQCALSKKCIPH 261
+F C G+C+ + +C+G DC+ D SDE N H+ C Q C ++C+
Sbjct: 1032 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMNCDEEHRHKPKVLCSPSQFACHSGEQCVDK 1090
Query: 262 NWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1091 ERRCDNRKDCH-----DHSDEQHCEKFDKSKKCHVHQHGCD-NGKCVDSSLVCDGTNDCG 1144
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DN+DE + C P +CGS + C+A S CDG+ DCS+G DE C
Sbjct: 1145 -----DNSDE----LLCEATLRCEPGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKCV 1194
Query: 378 NKA 380
+++
Sbjct: 1195 HRS 1197
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDE-RGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSD 293
Query: 271 CSTDDIVDNTD 281
CS D D TD
Sbjct: 294 CS--DGSDETD 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
>gi|24641935|ref|NP_511151.2| yolkless, isoform A [Drosophila melanogaster]
gi|22832717|gb|AAF48349.2| yolkless, isoform A [Drosophila melanogaster]
Length = 1937
Score = 141 bits (355), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATSRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C+H+ +Q L +C+ + +CD +E++C T
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGT 1234
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D++ +C G+ +C +
Sbjct: 1235 DSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1294
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ + ++ + +S ++ C P+ C +CV
Sbjct: 1295 ECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDC-QDGECV 1353
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1354 DLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1413
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1414 KSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1469
Query: 471 TVDIRRI 477
++R +
Sbjct: 1470 FNEVRNL 1476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC + DE C P F C G C+ C+G +C G
Sbjct: 102 CILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 160
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD DC+ +D++
Sbjct: 161 EDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGC 220
Query: 280 TDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 221 KQAEITCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDERG------C 262
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCS 392
LC P + C + C+ LS+ CDG DCS+G DE C++K DC+ KC+ KC
Sbjct: 263 LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCH 322
Query: 393 PTP-RGAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA CFCP G K + C D DEC D C Q C NT Y C C GY L
Sbjct: 323 MMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDK 382
Query: 449 DGKSCTAVNV-PQDEPASIIFSSTVDIRRIHLN 480
D ++C AV +++ +++++ + I +HL
Sbjct: 383 DNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIP 260
+F C G+C+ + +C+G DC+ D SDE N C + C Q C ++C+
Sbjct: 1032 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMN-CDEEHRRKPKVLCSPNQFACHSGEQCVD 1089
Query: 261 HNWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1090 KERRCDNRKDCH-----DHSDEQHCEKFDKSKKCHVHQHGCD-NGKCVDSSLVCDGTNDC 1143
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C P +CGS + C+A S CDG+ DCS+G DE C
Sbjct: 1144 G-----DNSDE----LLCEATSRCEPGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKC 1193
Query: 377 NNKA 380
+++
Sbjct: 1194 VHRS 1197
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDE-RGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSD 293
Query: 271 CSTDDIVDNTD 281
CS D D TD
Sbjct: 294 CS--DGSDETD 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
>gi|45555120|ref|NP_996433.1| yolkless, isoform B [Drosophila melanogaster]
gi|47117786|sp|P98163.2|YL_DROME RecName: Full=Putative vitellogenin receptor; AltName: Full=Protein
yolkless; Short=YL; Flags: Precursor
gi|45446948|gb|AAS65339.1| yolkless, isoform B [Drosophila melanogaster]
Length = 1984
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATSRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C+H+ +Q L +C+ + +CD +E++C T
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGT 1234
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D++ +C G+ +C +
Sbjct: 1235 DSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1294
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ + ++ + +S ++ C P+ C +CV
Sbjct: 1295 ECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDC-QDGECV 1353
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1354 DLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1413
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1414 KSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1469
Query: 471 TVDIRRI 477
++R +
Sbjct: 1470 FNEVRNL 1476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC + DE C P F C G C+ C+G +C G
Sbjct: 102 CILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 160
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD DC+ +D++
Sbjct: 161 EDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGC 220
Query: 280 TDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 221 KQAEITCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDERG------C 262
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCS 392
LC P + C + C+ LS+ CDG DCS+G DE C++K DC+ KC+ KC
Sbjct: 263 LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCH 322
Query: 393 PTP-RGAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA CFCP G K + C D DEC D C Q C NT Y C C GY L
Sbjct: 323 MMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDK 382
Query: 449 DGKSCTAVNV-PQDEPASIIFSSTVDIRRIHLN 480
D ++C AV +++ +++++ + I +HL
Sbjct: 383 DNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIP 260
+F C G+C+ + +C+G DC+ D SDE N C + C Q C ++C+
Sbjct: 1032 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMN-CDEEHRRKPKVLCSPNQFACHSGEQCVD 1089
Query: 261 HNWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1090 KERRCDNRKDCH-----DHSDEQHCEKFDKSKKCHVHQHGCD-NGKCVDSSLVCDGTNDC 1143
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C P +CGS + C+A S CDG+ DCS+G DE C
Sbjct: 1144 G-----DNSDE----LLCEATSRCEPGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKC 1193
Query: 377 NNKA 380
+++
Sbjct: 1194 VHRS 1197
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDE-RGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSD 293
Query: 271 CSTDDIVDNTD 281
CS D D TD
Sbjct: 294 CS--DGSDETD 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
>gi|395819149|ref|XP_003782962.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Otolemur garnettii]
Length = 845
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 168/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-NDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + ++ C
Sbjct: 231 RQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSLTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
IP W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 IPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDEG--PFCNNKAD---CENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE P + D CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSLTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R PLVT +IQWP+ + +D + LYW DS L+ + SV ++G ++
Sbjct: 580 KIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLK 639
Query: 167 PNEL 170
E
Sbjct: 640 SLEF 643
>gi|28316919|gb|AAO39481.1| RE59172p [Drosophila melanogaster]
Length = 1937
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATSRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C+H+ +Q L +C+ + +CD +E++C T
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGT 1234
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D++ +C G+ +C +
Sbjct: 1235 DSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1294
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ + ++ + +S ++ C P+ C +CV
Sbjct: 1295 ECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDC-QDGECV 1353
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1354 DLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1413
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1414 KSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1469
Query: 471 TVDIRRI 477
++R +
Sbjct: 1470 FNEVRNL 1476
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC + DE C P F C G C+ C+G +C G
Sbjct: 102 CILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 160
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD DC+ +D++
Sbjct: 161 EDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGC 220
Query: 280 TDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 221 KQAEITCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDERG------C 262
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCS 392
LC P + C + C+ LS+ CDG DCS+G DE C++K DC+ KC+ KC
Sbjct: 263 LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCH 322
Query: 393 PTP-RGAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA CFCP G K + C D DEC D C Q C NT Y C C GY L
Sbjct: 323 MMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDK 382
Query: 449 DGKSCTAVNV-PQDEPASIIFSSTVDIRRIHLN 480
D ++C AV +++ +++++ + I +HL
Sbjct: 383 DNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIP 260
+F C G+C+ + +C+G DC+ D SDE N C + C Q C ++C+
Sbjct: 1032 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMN-CDEEHRRKPKVLCSPNQFACHSGEQCVD 1089
Query: 261 HNWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1090 KERRCDNRKDCH-----DHSDEQHCEKFDKSKKCHVHQHGCD-NGKCVDSSLVCDGTNDC 1143
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C P +CGS + C+A S CDG+ DCS+G DE C
Sbjct: 1144 G-----DNSDE----LLCEATSRCEPGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKC 1193
Query: 377 NNKA 380
+++
Sbjct: 1194 VHRS 1197
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDE-RGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSD 293
Query: 271 CSTDDIVDNTD 281
CS D D TD
Sbjct: 294 CS--DGSDETD 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
>gi|395819147|ref|XP_003782961.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Otolemur garnettii]
Length = 873
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 169/367 (46%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-NDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
++ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SLTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
IP W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 IPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDEG--PFCNNKAD---CENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE P + D CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSLTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EKAGM+G +R PLVT +IQWP+ + +D + LYW DS L+ + SV ++G ++
Sbjct: 580 KIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLK 639
Query: 167 PNEL 170
E
Sbjct: 640 SLEF 643
>gi|345785304|ref|XP_003432666.1| PREDICTED: very low-density lipoprotein receptor [Canis lupus
familiaris]
Length = 845
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGEHEFQCSTSS-CIPLSWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C + QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVMHTKCPASETQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------GPFC 376
P++ C C+ S+ C+G DC +G DE G C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + +K C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 154/375 (41%), Gaps = 92/375 (24%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R G+ C P++ +C ++ +C+ L CDG DC++G DE C F C
Sbjct: 23 RATGAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNN 81
Query: 215 GKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 271
G+C+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 82 GQCVPNRWQCDGDPDC-EDGSDENPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDC 140
Query: 272 ST----------------------------------DDIVDNTDEDWDKFHQCFNGQVQC 297
+ DD D +DE C + QC
Sbjct: 141 DSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGEHEFQC 200
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVA 355
+ S CIP +W+CD++ DCS D +DE ++ + C +E +CGS +C+
Sbjct: 201 STS-SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVMHTKCPASETQCGSG-ECIH 253
Query: 356 LSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------P 395
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 254 KKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCK 313
Query: 396 RGAMCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTN 431
C P +C+D +ECL+ +G C C +
Sbjct: 314 NVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKD 373
Query: 432 THLSYVCSCTEGYTL 446
+ Y C C G+ L
Sbjct: 374 LVIGYECDCAAGFEL 388
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTRRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|432098390|gb|ELK28190.1| Low-density lipoprotein receptor-related protein 2 [Myotis davidii]
Length = 4330
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 143/307 (46%), Gaps = 27/307 (8%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKC 217
S+ C P++ C ++C+ L+ CDG DC +G DE C CT QF C KC
Sbjct: 1013 SNFTATCLPSQFHC-PDHRCIDLAYVCDGDKDCVDGSDENG-CVINCTASQFKCASENKC 1070
Query: 218 IPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
I + CDG DC D SDE P C + QC CIP W CD DC
Sbjct: 1071 ISNVYHCDGVFDC-SDHSDEKDCPTRPPGMCHQDEFQCQSDGLCIPGIWECDGHPDC--- 1126
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
I + + + C CA + CI W+CD + DC D +DE K
Sbjct: 1127 -IHGSDEHNGCVLKTCSPSHFLCA-NGNCIHKEWVCDGDNDCR-----DMSDE---KDCP 1176
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCS 392
A C + +C + CV L+ CDG PDC NG DE P CN ++ C NL C+H+C
Sbjct: 1177 TQAFHCPNWQWQCPGHSICVNLTAVCDGVPDCPNGTDESPLCNQES-CSNLNAGCTHQCV 1235
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P GA C CP G N +KT C D DEC G C Q C NT S+ C C + Y L D
Sbjct: 1236 QGPFGAQCLCPLGYLLANDSKT-CEDIDECDNPGFCSQHCYNTRGSFRCWCDKEYMLDTD 1294
Query: 450 GKSCTAV 456
GK+C
Sbjct: 1295 GKTCKVT 1301
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 149/331 (45%), Gaps = 32/331 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSN--GEDEGPFCNA-ECTPGQFSC-----GMGK 216
C +E +C S +C+ CDG DC + EDE C C+ +F C +
Sbjct: 2691 CLSDEFKC-DSGRCIQTEWICDGDNDCGDMSDEDERHHCERHRCSGSEFLCVNNVPPSRR 2749
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CIP+SW CDG DC DG DE C +G +CIP ++ CD DC
Sbjct: 2750 CIPQSWVCDGDADC-TDGYDERQNCTRGSCSGNDFICNDGQCIPDSYRCDRHNDCG---- 2804
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH- 335
D +DE + C Q C + CI ++CD DC D++DE ++ H
Sbjct: 2805 -DYSDERNCLYPTCNQNQFTCQ-NGFCIYKTYVCDGVNDCR-----DDSDEL--EHLCHV 2855
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPT 394
C P++ +C + N C+ + K C+ DC + DE N+ + L C H C+ T
Sbjct: 2856 PETTCPPHQFKCDNGN-CIEMVKVCNHLDDCLDNSDEKGCGINECNDPTLSVCDHNCTDT 2914
Query: 395 PRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
C C G +K C D DEC C Q C NT SY+C C GY PDGK
Sbjct: 2915 LTSFYCSCRPGYKLMSDKRTCGDIDECKETPFVCSQKCENTMGSYICKCAPGYIREPDGK 2974
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC + EP +IFS+ +R + ++GS
Sbjct: 2975 SCRQNS--NIEPY-LIFSNRYYLRNLTIDGS 3002
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 104/203 (51%), Gaps = 18/203 (8%)
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+ C Q C + CI +W+CD + DC+ DN DED + H+ C+P E
Sbjct: 169 YGTCRGNQFTCP-NGHCINQDWVCDGDDDCA-----DNGDEDGCESSPHHFHKCYPGEWA 222
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCSPTPRGAMCFC 402
C S +C+ ++K CDG DC +GEDEG + + C L C ++C P G C+C
Sbjct: 223 CPQSGKCIPMTKVCDGILDCPSGEDEGNATALRPCDVSLCPFLSCEYQCHMAPFGGACYC 282
Query: 403 PAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
P G QN N +CVD D+C + G CDQ C + + C C EGY L + + C A N
Sbjct: 283 PPGYVVDQN-NTRKCVDFDDCQVWGVCDQMCEDRVGHHQCHCAEGYILEHE-RHCKA-NT 339
Query: 459 PQDEPASIIFSSTVDIRRIHLNG 481
E AS+IFS+ D+ ++G
Sbjct: 340 SSGE-ASVIFSNGRDLLIGDIHG 361
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 126/294 (42%), Gaps = 26/294 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+ CD DC + DE C PG F C G C+P+ +C
Sbjct: 3544 CSESEFRC-DDQRCIPSRWICDFNNDCGDNSDERDCEMRTCHPGYFQCKSGHCVPDELRC 3602
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
DG DCL D SDE C + NG A+ +C H W+CD + DC D
Sbjct: 3603 DGISDCL-DASDEA-VCPTRFPNGTYCPAVMFECKNHICVQPFWICDGDNDCG-----DG 3655
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H C + + +C + + EM DD D +DE +
Sbjct: 3656 SDEE---LHLCLSVPCESPHRFRCDNNRCIYSHEMCNHVDDCGDGSDEKAENCVGPTPRP 3712
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD---CENLKCSHKCSPTPR 396
C +E +C S+ QC++ CD DC + DE CN + ENL C C+
Sbjct: 3713 CAEDEFKC-SNKQCISQHLACDDVDDCGDQSDETG-CNKGKERSCAENL-CEQNCTQLSE 3769
Query: 397 GA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
G +C C G ++ C D +EC +C Q C NT SY C C EG+
Sbjct: 3770 GGFICSCRPGFKASISDRNSCDDINECEQFATCPQHCQNTKGSYECYCAEGFRF 3823
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGM 214
VD +H +C + C ++ +C+ + CDG+ DC +G DE P C C GQF C
Sbjct: 3288 VDSTHCLPMCSSTQFLCANNEKCIPIWWKCDGQKDCLDGSDEPPTCPQRYCHLGQFQCKD 3347
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G C + CD +C DGSDE H+C + + QCA +K+CIP W CD DC
Sbjct: 3348 GNCTSPYFLCDTHQNC-PDGSDEDLVLCEHHKCESNEWQCA-NKRCIPEAWQCDSVNDCG 3405
Query: 273 TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D++DED C +G +CA + CIP W CD + DC D +DE
Sbjct: 3406 -----DDSDEDSSHCASRTCPSGYFKCA-NGHCIPQTWKCDVDNDCG-----DYSDEPVH 3454
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + E C ++ +C+ C+G DC + DE
Sbjct: 3455 ECMGPAYRCDNHTEFSCKTNYRCIPKLAVCNGVDDCRDNSDE 3496
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 135/338 (39%), Gaps = 90/338 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ I WP+ L IDY D LYW D+H
Sbjct: 3131 IGRVGMDGVNKSVIISTKIAWPNGLTIDYTNDRLYWADAHLGYIEYSDLEGQNRHTVYDG 3190
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3191 TLSHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRMVLVNTTHRPYDIHVYHPYRQPIV 3250
Query: 171 --RCGSSN---------QCVALSKFCDGKPDCSNGE-DEGPFCNAECTPGQFSCGMG-KC 217
CG++N Q C+ D + + C C+ QF C KC
Sbjct: 3251 NNPCGTNNGGCSHLCLIQAGGNGFTCECPDDFKTIQLVDSTHCLPMCSSTQFLCANNEKC 3310
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DCL DGSDEP TC + C GQ QC C +LCD +C
Sbjct: 3311 IPIWWKCDGQKDCL-DGSDEPPTCPQRYCHLGQFQCK-DGNCTSPYFLCDTHQNCP---- 3364
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD DC D++DED S
Sbjct: 3365 -DGSDEDLVLCEHHKCESNEWQCA-NKRCIPEAWQCDSVNDCG-----DDSDED----SS 3413
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H A P+ ++ C+ + CD DC + DE
Sbjct: 3414 HCASRTCPSGYFKCANGHCIPQTWKCDVDNDCGDYSDE 3451
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CH C + +CV CD DC N ++EG A +F+C +CIP +
Sbjct: 2568 CHSTAFTC-DNGKCVPYHYRCDHYNDCGDNSDEEGCLFIACNATTEFTCNNRRCIPLQFV 2626
Query: 224 CDGFVDCLE-DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C + D SDE N H C + + C S CIPH+W CD+E DC +D +DE
Sbjct: 2627 CNGINNCHDNDTSDEKNCPSHSCSSSEFHCT-SGPCIPHHWYCDQERDC-----LDGSDE 2680
Query: 283 DWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ C + + +C S +CI W+CD + DC D +DED + +
Sbjct: 2681 PATCVYPESTCLSDEFKCD-SGRCIQTEWICDGDNDCG-----DMSDEDERHHCERHR-- 2732
Query: 340 CHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDE 372
C +E C + S +C+ S CDG DC++G DE
Sbjct: 2733 CSGSEFLCVNNVPPSRRCIPQSWVCDGDADCTDGYDE 2769
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 104/229 (45%), Gaps = 25/229 (10%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RC SN +C+ CD DC +G DE A C F+C GKC+P
Sbjct: 2523 NGARCVGSNFTCLNGRCITEQWKCDNSNDCGDGSDELESVCAFHTCHSTAFTCDNGKCVP 2582
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
++CD + DC D SDE C +++CIP ++C+ +C + D
Sbjct: 2583 YHYRCDHYNDC-GDNSDEEGCLFIACNATTEFTCNNRRCIPLQFVCNGINNCHDN---DT 2638
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H C + + C S CIPH+W CD+E DC +D +DE + +
Sbjct: 2639 SDEKNCPSHSCSSSEFHCT-SGPCIPHHWYCDQERDC-----LDGSDEPATCVYPEST-- 2690
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C +E +C S +C+ CDG DC + DE + + CE +CS
Sbjct: 2691 CLSDEFKC-DSGRCIQTEWICDGDNDCGDMSDE----DERHHCERHRCS 2734
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 138/369 (37%), Gaps = 62/369 (16%)
Query: 40 TDEDWDKYFKRILNGTHTLALEFNHRN--QSLCF-----------IQQQNVSSVRLRCAQ 86
+D D +K+ ++GT L N +SL F + ++VS +RL
Sbjct: 708 SDTSVDMIYKQKIDGTGREILTANRVESVESLTFDWISKNLYWTDLSYRSVSVMRLADKS 767
Query: 87 INDLLNSWDLP--------APEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
+++ + + P A IF D ++ +A G N P+V + WP+ L I
Sbjct: 768 RREIIRNLNNPRSIVVHPIAGYIFFTDWFRPAKIMRAWGDGSNLLPIVNTTLGWPNGLAI 827
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
D+ LYW D+ + +E DG VL H ++ L+ F D
Sbjct: 828 DWGALRLYWVDALFDKIEHSTFDGLDRRVLGHIQQM-----THPFGLTVFQDYV--FFTD 880
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF- 246
G T G + I + D ++ GS+ PN C H CF
Sbjct: 881 WRLGAIVRVRKTDGGEMTVIRSGISNIMHVKSYDDSIQIGSNYCNRPTHPNGDCSHFCFP 940
Query: 247 --NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKC 303
N Q C C L + C D + E F C NG +C
Sbjct: 941 VPNFQRVCG----CPYGMSLTSNHLTCVEDPSHEPPLEQCGSFSFPCNNG--------RC 988
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
+P + CD DD DN+DE + A C P++ C ++C+ L+ CDG
Sbjct: 989 VPSYYRCD-----GIDDCHDNSDEHLCGTSNFTAT-CLPSQFHC-PDHRCIDLAYVCDGD 1041
Query: 364 PDCSNGEDE 372
DC +G DE
Sbjct: 1042 KDCVDGSDE 1050
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 122/290 (42%), Gaps = 40/290 (13%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP L +D+ +D+LYW D+ L +E + G+ V+
Sbjct: 2356 NAKIERATVGGNFREPVVNSSLVWPCGLTVDHEEDLLYWADASLRKIERSTLKGTEREVI 2415
Query: 165 CHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE-- 220
G + Q + + + K N D G A T F + + +
Sbjct: 2416 VITILRPFGLTINGQYIYWTDWSTRKIYRVNKYD-GSGQTAMTTSFPFRLMSVRVVVKDH 2474
Query: 221 ----SWKCDGF-VDCLEDGSDEPNTCIHQC--------FNGQVQCAL--SKKCIPHNWLC 265
S CD F C + PN QC N C + +C+ N+ C
Sbjct: 2475 PQQCSNPCDQFNGGCSHVCAPGPNGAECQCPQEGRWYLANNNKHCIVDNGARCVGSNFTC 2534
Query: 266 ------DEEMDC-STDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
E+ C +++D D +DE FH C + C + KC+P+++ CD DC
Sbjct: 2535 LNGRCITEQWKCDNSNDCGDGSDELESVCAFHTCHSTAFTCD-NGKCVPYHYRCDHYNDC 2593
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
DN+DE+ + + NA E C ++ +C+ L C+G +C
Sbjct: 2594 G-----DNSDEEGCLFIACNAT----TEFTC-NNRRCIPLQFVCNGINNC 2633
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 19/120 (15%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S R+ A+++ W D PA + + + ++E A M
Sbjct: 3893 IYWSDARSQRIEVAKLDGRYRKWLITTQLDQPAAVVVNPKLGLMYWTDWGKEPKIESAWM 3952
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
G++RS LV +++ WP+ L IDY N D +YW D T+E+++ DG+ ++ RC
Sbjct: 3953 DGQHRSILVREDLGWPTGLSIDYLNNDRIYWSDFKEKTIETIKYDGTDRRIVASAVPNRC 4012
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T +L +++ RN Q + +L + +L S ++ P LD RL
Sbjct: 1381 TESLVVDWVGRNLYWTNYALQTIEVSKLDGSH-RTVLISENVTMPRGLALDPRLSEHLMF 1439
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G +R+ +V I WP+ L IDY +LY+ D++L+ ++ DG
Sbjct: 1440 WSDWGHHPRIERASMDGSSRTVIVQDKILWPNGLTIDYPNRLLYFLDAYLDYLDFCDYDG 1499
Query: 159 SH-------NAVLCHPNEL 170
H + +L HP L
Sbjct: 1500 QHRRQVIASDLILRHPYAL 1518
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKC 258
C QF+C G CI + W CDG DC EDG + H+C+ G+ C S KC
Sbjct: 170 GTCRGNQFTCPNGHCINQDWVCDGDDDCADNGDEDGCESSPHHFHKCYPGEWACPQSGKC 229
Query: 259 IPHNWLCDEEMDCSTDD 275
IP +CD +DC + +
Sbjct: 230 IPMTKVCDGILDCPSGE 246
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+E+A M G NR LV + WP+ + +D +YW DS + +E+V DG+ + H
Sbjct: 488 VERAFMDGTNRKDLVKTKLGWPAGITLDLVLKRVYWVDSRFDYIETVTYDGTQRKTVLH 546
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEG----PFCNAECTPGQFSCGM-GKCI 218
C N+ C + C+ CDG DC+ NG+++G P +C PG+++C GKCI
Sbjct: 172 CRGNQFTC-PNGHCINQDWVCDGDDDCADNGDEDGCESSPHHFHKCYPGEWACPQSGKCI 230
Query: 219 PESWKCDGFVDCLEDGSDEPNT 240
P + CDG +DC G DE N
Sbjct: 231 PMTKVCDGILDC-PSGEDEGNA 251
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + F Q C D + G C+Q C +H
Sbjct: 578 NKFSETNPQVFYQSSLRPFGVIVFHSLRQPHASNPCGDNN-----GGCEQVCVLSHRTDN 632
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L Y C CT G+ L DG C AV +IFSS V +R I
Sbjct: 633 DGLGYRCKCTFGFNLDVDGHRCVAVK------QFLIFSSEVAVRGI 672
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
H+ C+P E C S +C+ ++K CDG DC +GEDEG
Sbjct: 211 HHFHKCYPGEWACPQSGKCIPMTKVCDGILDCPSGEDEG 249
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A +G +R ++ SLV+D+ LYW + L T+E ++DGSH VL
Sbjct: 1359 KIWSAFQNGTDRKLVLDSGTTMTESLVVDWVGRNLYWTNYALQTIEVSKLDGSHRTVLIS 1418
Query: 167 PN 168
N
Sbjct: 1419 EN 1420
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + NR+ LV++ I P + +D++ +YW D L+ + + ++G V+
Sbjct: 2041 KIERAFLDCTNRTVLVSEGIVTPRGVAVDHSNGYVYWVDDTLDVISRIDIEGKELKVI 2098
>gi|195431345|ref|XP_002063703.1| GK15819 [Drosophila willistoni]
gi|194159788|gb|EDW74689.1| GK15819 [Drosophila willistoni]
Length = 4637
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/220 (44%), Positives = 123/220 (55%), Gaps = 17/220 (7%)
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
W CD + DC+ D D T E DK +C GQ +C S KCIPHNW CD E DC D
Sbjct: 3 WKCDSKPDCT--DGSDETSE-CDKAPKCNEGQFRCGKSLKCIPHNWYCDGEYDCGKGDTS 59
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-AD 381
D T+ A C E +C + C+ LS+FCDG DC N E + C+ + A
Sbjct: 60 DETN-----CLDDVAPKCRGFEGKC-HNGACLELSRFCDGHWDCDNDELQ---CDKQNAA 110
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C L CS+ C TP GA C+CP GQ P N T+C+D DEC G+CDQ C NT SY C
Sbjct: 111 CAALNCSYNCKLTPHGARCYCPQGQVPESANSTRCMDYDECSETGTCDQICRNTPGSYEC 170
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
SC GY + +G+ C A+NVP E AS++ S +IRRI+
Sbjct: 171 SCVSGYA-KANGRHCLAINVPPSESASLVLLSLSEIRRIN 209
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 119/373 (31%), Positives = 163/373 (43%), Gaps = 66/373 (17%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C + C + CVA + CDG+PDCS+G DE C C QFSC G CIP SW
Sbjct: 2689 ISCSIGQFTCANGG-CVAGAWRCDGEPDCSDGSDESG-CRTSCQMNQFSCDNG-CIPSSW 2745
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CDG DC EDG+DE + C ++ C Q QC S +CIP W+CD E DC
Sbjct: 2746 QCDGKSDC-EDGTDEGSQCPNRPCPAHQFQCKSSGRCIPQKWVCDGEKDCPLAPNGQQGH 2804
Query: 282 EDWDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
ED +C C+ S CI +++CD + DC D+ E + +
Sbjct: 2805 EDEGAHCGGVAHLPECLPPAFHCS-SGLCIDAHYVCDGDEDCPGG---DDEYEGCEPVYP 2860
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------- 374
+A +C C+ ++ CDGK DC +G DE
Sbjct: 2861 AHACPGGAQMHQC-QDGFCIPKNQTCDGKSDCPDGSDELASLCSHTRLCNGADDFRCKNG 2919
Query: 375 -------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAGQN--PNK 410
C+ + DC + C H+C G C C G P
Sbjct: 2920 ACISADLLCDRRNDCADFSDEELCNVNECMIKDICEHECVDKVIGYECRCREGYKLLPKS 2979
Query: 411 TQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
T C D DEC + C QTC NT+ SY C C +GY LR D +C A + D P +IFS
Sbjct: 2980 THLCTDIDECAEEQPCSQTCINTYGSYKCLCAKGYELR-DHHTCKATS---DIPMKLIFS 3035
Query: 470 STVDIRRIHLNGS 482
+ IR++++ G+
Sbjct: 3036 NRYYIRQVNVTGN 3048
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/335 (32%), Positives = 154/335 (45%), Gaps = 28/335 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----FCNAECTPGQFSCGMGKCI 218
+ C+ NE C S +C+ LS D DC +D F ++C +F CG G+C
Sbjct: 954 ITCNSNEFTCEKSGRCIQLSWVNDNVVDCGPNDDSDESSDVFFGSKCP--EFDCGNGRCR 1011
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ CDG +C + +DE C H+C +G+ C C CD DC D
Sbjct: 1012 QFADVCDGIDNC-GNNADE-FACEHECGHGERYCR-PIGCYGEMHRCDGIFDCQDYSDED 1068
Query: 279 NTDE---------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
N +E W + +C + C+ +CIP CD C +N E
Sbjct: 1069 NCNETKSDNHPLTGWKELGECAPFEFACSDPFECIPDFLRCDGIPHCYDKTDENNCTELH 1128
Query: 330 DKYFSHN-AVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL-K 386
+F N V+C HP+ L CG +N+C+ +++ CDGK DC + DEG C +K CE +
Sbjct: 1129 ATHFDMNETVICEHPDRL-CGFTNKCITVTQLCDGKNDCEDTTDEGFLCADKL-CEQFNE 1186
Query: 387 CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C TP G +C CPA PN +C C +C Q C Y C C EGY
Sbjct: 1187 CSHHCHNTPEGYICSCPAHLFLQPNGKRCSMQHACDNWDTCSQVCETKGKGYQCRCLEGY 1246
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
L D +C + DEP +IF++ DIR I+L
Sbjct: 1247 DLAYDKFTCKS--TAPDEPY-VIFTNRQDIRGINL 1278
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 154/364 (42%), Gaps = 77/364 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCIP 219
V C PN+ C +S +C+ L+ CD + DC +GEDE C A C P F C KCIP
Sbjct: 3501 VSCEPNDFHC-NSGRCIPLAWRCDDEQDCPDGEDEPASCFTSKATCDPTYFKCNNSKCIP 3559
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N + C + +C + KCI H++ CD E+ C S+D+I
Sbjct: 3560 GRWRCDYENDC-GDGSDELNCQMRNCSESEFRCG-TGKCIKHDYRCDGEIHCEDSSDEIN 3617
Query: 278 DNTDEDWDKF-----HQCFNGQVQCAL-----------------------SKKCIPHNWL 309
N ++F + C N Q QC + KCI W
Sbjct: 3618 CNITCKANQFKCAAFNTCINKQYQCDGDDDCPDGSDEVNCTCPADHFTCGNGKCIMSRWK 3677
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD DD +D +DE Y + V CH N +C ++ C+ S CDG DC N
Sbjct: 3678 CD-----GWDDCLDGSDE---SYATCAHVHCHANAFKC-TNLICIRKSALCDGINDCGNN 3728
Query: 370 EDEG-------PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECL- 420
EDE P C +++ CEN C + ++ C N C+D + +
Sbjct: 3729 EDESDEVCAALPKCRHDQFQCENDDCIN--------SIFRCDGQYN-----CIDGSDEMN 3775
Query: 421 ------IDGSCDQTCTNTHLSYV-CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
SC Q C + C CTEGY P + + P ++ +S +
Sbjct: 3776 CTPPVCGFASCSQICIEKKAGHFNCKCTEGYHKGPQKNATCLASGPDQ---ILLLASEQE 3832
Query: 474 IRRI 477
R I
Sbjct: 3833 FRFI 3836
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 101/234 (43%), Gaps = 33/234 (14%)
Query: 165 CHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C ++CG++ CV SK CDG DC GEDE C QF CG +C+P
Sbjct: 3420 CFDTHMKCGATTNTSAFCVENSKRCDGVHDCPGGEDEAGCIPLVCKKDQFQCGNNRCMPN 3479
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG VDC D SDE N C C S +CIP W CD+E DC +
Sbjct: 3480 VWVCDGDVDC-PDKSDEANCEHVSCEPNDFHCN-SGRCIPLAWRCDDEQDCPDGE----- 3532
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ CF + C + KCIP W CD E DC D +DE +
Sbjct: 3533 ----DEPASCFTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG-----DGSDE-----LN 3578
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C +E RCG+ +C+ CDG+ C + DE CN KC+
Sbjct: 3579 CQMRNCSESEFRCGTG-KCIKHDYRCDGEIHCEDSSDE-INCNITCKANQFKCA 3630
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/222 (36%), Positives = 99/222 (44%), Gaps = 28/222 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
LC C +++C+ + CDG C +G DE +C P QF CG G+CI S+
Sbjct: 2567 LCPEGHFMC-QNHRCIGQEQTCDGLQQCGDGSDETALL-CKCQPDQFRCGSGECIARSFL 2624
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQV---QCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CD DC D SDE C G CA S CI +W CD E DC D T
Sbjct: 2625 CDNMRDC-RDFSDEKMCPPRTCDQGDTTFEHCANSTICIMPSWRCDGEPDCP-----DAT 2678
Query: 281 DEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DE+ C GQ CA + C+ W CD E DCS D +DE S
Sbjct: 2679 DEEGCANITRISCSIGQFTCA-NGGCVAGAWRCDGEPDCS-----DGSDE------SGCR 2726
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
C N+ C N C+ S CDGK DC +G DEG C N+
Sbjct: 2727 TSCQMNQFSC--DNGCIPSSWQCDGKSDCEDGTDEGSQCPNR 2766
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 156/409 (38%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ KAGM G N ++ N+ WP++L I +
Sbjct: 3170 IGKAGMDGSNPRMIIRDNLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3229
Query: 138 -----------------QDILYWCDSHLNTVESVRVDGSHN-----AVLCHPNELRCG-- 173
+D +YW D ++E N + P +LR
Sbjct: 3230 SINPHINLHHIFAIAVWEDRIYWSDWETKSIEYCNKYNGQNCSTLITTIHRPMDLRVYHP 3289
Query: 174 -------SSNQCVAL--SKFCDGKPD-------CSNG---EDEGPFCNAECTPGQFSC-G 213
S N C+ S C P+ C N D+G C A CT F C
Sbjct: 3290 YRQQQPLSGNPCLTANCSTLCLLSPEAPYYKCACPNNFILADDGRTCRANCTAAHFECVN 3349
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP C C GQ QCA +KKCI + +CD C
Sbjct: 3350 TYKCIPFYWRCDTQDDC-GDGSDEPENCPPFHCEPGQYQCA-NKKCIHPSSICDGINQCG 3407
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
DNTDE + +KF CF+ ++C +
Sbjct: 3408 -----DNTDELNCEKF-TCFDTHMKCGATTNTSAFCVENSKRCDGVHDCPGGEDEAGCIP 3461
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+P+ W+CD ++DC D +DE ++ S C PN+ C
Sbjct: 3462 LVCKKDQFQCGNNRCMPNVWVCDGDVDCP-----DKSDEANCEHVS-----CEPNDFHC- 3510
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
+S +C+ L+ CD + DC +GEDE C +KA C+ KC++ KC P
Sbjct: 3511 NSGRCIPLAWRCDDEQDCPDGEDEPASCFTSKATCDPTYFKCNNSKCIP 3559
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 139/375 (37%), Gaps = 90/375 (24%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D+ +++ D RL E+A G NR L + ++ + D+L+W D L+
Sbjct: 2386 TLDVEQQQLYWADARLDKIERANYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2443
Query: 150 TVESVRVDGSHNAVLCHPNELRCGS------------SNQCVALSKFCD----------G 187
V + + + R +NQC L+ C+
Sbjct: 2444 AVVRANKYTGTDVLFLREHVARPMGIIAVQNSSINCDANQCKILNGLCEDVCILSKSGLA 2503
Query: 188 KPDCSNG--EDEGPFCNA----ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-- 239
C+ G +G C A C QF+C G+CIP CD CL DGSDE
Sbjct: 2504 TCHCTQGVLAADGRRCIAPVHTTCGKSQFNCHSGECIPLELTCDNVTHCL-DGSDEARSY 2562
Query: 240 -----------------------TC--IHQCFNGQVQCAL------------SKKCIPHN 262
TC + QC +G + AL S +CI +
Sbjct: 2563 CIFRLCPEGHFMCQNHRCIGQEQTCDGLQQCGDGSDETALLCKCQPDQFRCGSGECIARS 2622
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV---QCALSKKCIPHNWLCDEEMDCSTD 319
+LCD DC D +DE C G CA S CI +W CD E DC
Sbjct: 2623 FLCDNMRDCR-----DFSDEKMCPPRTCDQGDTTFEHCANSTICIMPSWRCDGEPDCP-- 2675
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
D TDE+ + + C + C + CVA + CDG+PDCS+G DE C
Sbjct: 2676 ---DATDEEGCANITR--ISCSIGQFTCANGG-CVAGAWRCDGEPDCSDGSDESG-CRTS 2728
Query: 380 ADCENLKCSHKCSPT 394
C + C P+
Sbjct: 2729 CQMNQFSCDNGCIPS 2743
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 205 CTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCI 259
CT G F C G +CI CDGF DC +DGSDE N C Q + + + +C
Sbjct: 873 CTSG-FQCRGTRQCIDGKDLCDGFEDC-DDGSDESNDPTGPCNPQGCDQTLHFVCNGRCY 930
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
LC CS D +D+ + C + + C S +CI +W+ D +DC +
Sbjct: 931 QRALLCSSIAYCS-----DGSDQLNCEHITCNSNEFTCEKSGRCIQLSWVNDNVVDCGPN 985
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D++DE D +F E CG+ +C + CDG +C N DE
Sbjct: 986 ---DDSDESSDVFFGSKCP-----EFDCGNG-RCRQFADVCDGIDNCGNNADE 1029
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+++A + G ++ K+I+ P++L +D Q LYW D+ L+ +E DGS+ VL H
Sbjct: 2361 IQRAYLSGYGVERIIKKDIKMPNALTLDVEQQQLYWADARLDKIERANYDGSNRVVLAH 2419
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 108 LEKAGMHGENRSPLVTKN-----IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
+ A M G ++ L+TK IQWP SL +D +YWCD HL T+E +++DG+
Sbjct: 688 IYSAWMDGTHKE-LLTKGTNDLPIQWPRSLDVDRRTKRIYWCDFHLGTIERIKLDGTGRE 746
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGK 188
+L + + S Q + + D K
Sbjct: 747 ILFKSEQFQPYSMVQHNGMIYWVDNK 772
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 63/153 (41%), Gaps = 19/153 (12%)
Query: 36 IVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD 95
+V + D + L+ T LA+++ +N + +L L + +
Sbjct: 1323 LVGESLRDVEAVIHSGLSTTEGLAVDWIGKNLYWIDSNLDQIEVAKLN-GSFRRTLIAGN 1381
Query: 96 LPAPEIFPLDER---------------LEKAGMHGENRSPLVTK---NIQWPSSLVIDYN 137
+ +P LD R +E+ M GE R + T + WP+ L +DY
Sbjct: 1382 MESPRAIALDPREGLLFWTDWDDNSPRIERCSMAGEGRRMISTTWQLSAGWPNGLTLDYT 1441
Query: 138 QDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
Q +YW D+ +++ S + DGS + V+ E+
Sbjct: 1442 QKRVYWVDAKSDSISSTKYDGSEHHVVLRNKEI 1474
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL IDY LYW D T+E+ R++G V
Sbjct: 3975 LENGILVASLDGSNKKSLVERDVGWPLSLSIDYPTGRLYWADYRKGTIETCRLNGKDRNV 4034
Query: 164 L 164
+
Sbjct: 4035 V 4035
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
+C GQ +C S KCIPHNW CD E DC D D T+
Sbjct: 26 KCNEGQFRCGKSLKCIPHNWYCDGEYDCGKGDTSDETN 63
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+ + D + + HP+ L CG +N+C+ +++ CDGK DC + DEG C
Sbjct: 1127 LHATHFDMNETVICEHPDRL-CGFTNKCITVTQLCDGKNDCEDTTDEGFLC 1176
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
P L +D+ LYWCD L+T+E ++DG + VL + N
Sbjct: 3104 PDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVLINEN 3143
>gi|431894797|gb|ELK04590.1| Low-density lipoprotein receptor-related protein 1B [Pteropus
alecto]
Length = 3196
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 123/376 (32%), Positives = 169/376 (44%), Gaps = 72/376 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE A C QFSCG G+CIP +W
Sbjct: 436 CPDDQFKC-KNNRCIPKRWLCDGANDCGSNEDESNQTCAVRTCQVDQFSCGNGRCIPRAW 494
Query: 223 KCDGFVDCLEDGSDEPNT-------------CIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CD DC D +DE + C+H CF+ Q QC+ S +CIP +W CD +
Sbjct: 495 LCDREDDC-GDQTDEMASCDDDCGDGSDEVGCVHSCFDNQFQCS-SGRCIPGHWACDGDN 552
Query: 270 DC---STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD------- 319
DC S + ++ T E+ C + QC CIP W CD E DC
Sbjct: 553 DCGDFSDETQINCTKEEIRSPVGCNVNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCN 612
Query: 320 -------------------------------DIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
D D +DED ++ LC P + C
Sbjct: 613 GTLRLCDHKTKFSCRSTGRCINKAWVCDGDIDCEDQSDED-----DCDSFLCGPPKYPCA 667
Query: 349 S-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQ 406
+ ++ C+ K C+G+ DC +G DEG C ++ N CS+ C+ P RG +C CP G
Sbjct: 668 NDTSVCLQPEKLCNGRKDCPDGSDEGDLC-DECSLNNGGCSNHCTVVPGRGIVCSCPEGL 726
Query: 407 NPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
NK C D C C Q C + CSC EG+ L DG+SCT+V+ + A
Sbjct: 727 QLNKDNKTCEIVDYCSSHLKCSQVCEQHKHTVKCSCYEGWKLDIDGESCTSVDSFE---A 783
Query: 465 SIIFSSTVDIRRIHLN 480
IIFS +IRRI L+
Sbjct: 784 FIIFSIRHEIRRIDLH 799
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 169/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 1888 IRCNSTSLCVLPAWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 1947
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ S+KCI +W+CD E DC D +D +D
Sbjct: 1948 QKDC-EDGLDEFH-CDSSCSWNQFACS-SQKCISKHWICDGEDDCG--DGLDESDSICGA 2002
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI-----VDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC +D++ N D + + HN V
Sbjct: 2003 I-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSIAGCAPNNTCDENAFMCHNKV- 2060
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ +++ CDG DC + D
Sbjct: 2061 CIPKQFVCDYDDDCGDGSDEALQCGYRQCTAEEFSCADGRCLLNTQWQCDGDFDCPDHSD 2120
Query: 372 EGP-----------------------------FCNNKADCENLK---------------- 386
E P C+N+ DC +
Sbjct: 2121 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNQDDCGDGSDERNCHINECLSKKVS 2180
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G +N KT CVD DEC C Q C NT+ +Y C C +
Sbjct: 2181 GCSQDCQDLPVSYKCKCWPGFQLKNDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCID 2239
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 2240 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 2277
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 159/410 (38%), Gaps = 98/410 (23%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 2408 IGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSHRHKV--P 2463
Query: 168 NE--------------------------------------------------LRCGSSNQ 177
N+ RC +++
Sbjct: 2464 NQDIPGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADKLSLINSWHAITDIQFRC-KTDK 2522
Query: 178 CVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ CD DC +G DE C +C PG+F CG G C ++ CDG DC D SD
Sbjct: 2523 CIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDC-GDNSD 2581
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
E N H C +GQ +C ++KCIP N C+ + DC D DE + C Q
Sbjct: 2582 ELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDERDCPENSCSPDYFQ 2636
Query: 297 CALSKKCIPHNWLCDEEMDCS---------------TDDIVDNTDEDWDKYFSHN----- 336
C +K CI W+CDE+ DC+ D + N D +++
Sbjct: 2637 CKTTKHCISKLWVCDEDPDCADASDEANCEPQTCTLKDFLCANGDCVSSRFWCDGDFDCA 2696
Query: 337 --------AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C ++ RC + C+ + CDG DC +G DE +C+ K +
Sbjct: 2697 DGSDEMDCVSECKEDQFRCRNKAHCIPIRWLCDGIHDCVDGSDE-------ENCDRGKLT 2749
Query: 389 HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+K P + P QC D+C DGS +Q C T + C
Sbjct: 2750 YKARPCKKDEFACTNKKCIPVDLQCDQLDDCG-DGSDEQGCRITPTEFTC 2798
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 134/501 (26%), Positives = 183/501 (36%), Gaps = 139/501 (27%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 248 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHSNTLY 307
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGK--PDCSNGE----- 195
WCD++ + +E V ++G+H ++ EL N LS + + D NG
Sbjct: 308 WCDAYYDHIEKVFLNGTHRKIVYSGKEL-----NHPFGLSHYGNYVFWTDYMNGSIFQLD 362
Query: 196 ---DEGPFCNAECTP-------------GQFSCGM--GKC------IPESWKCDGFVDCL 231
+E E P G C + G C IP C + L
Sbjct: 363 LITNEVTLLRHERPPLFGLQIYDPRKQQGDNMCRINNGGCSTLCLAIPGGRVCACADNQL 422
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST------------------ 273
D + T H C + Q +C + +CIP WLCD DC +
Sbjct: 423 LDENGTTCTSNHSCPDDQFKCK-NNRCIPKRWLCDGANDCGSNEDESNQTCAVRTCQVDQ 481
Query: 274 ------------------DDIVDNTDEDWDK-------------FHQCFNGQVQCALSKK 302
DD D TDE H CF+ Q QC+ S +
Sbjct: 482 FSCGNGRCIPRAWLCDREDDCGDQTDEMASCDDDCGDGSDEVGCVHSCFDNQFQCS-SGR 540
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP +W CD + DC D D T + K + V C+ NE +C C+ CDG
Sbjct: 541 CIPGHWACDGDNDCG--DFSDETQINCTKEEIRSPVGCNVNEFQCHPDGNCIPDLWRCDG 598
Query: 363 KPDCSNGEDE----GPF----------------CNNKA----------------DCENLK 386
+ DC +G DE G C NKA DC++
Sbjct: 599 EKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWVCDGDIDCEDQSDEDDCDSFL 658
Query: 387 CSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-LIDGSCDQTCTNT-HLSY 436
C P ++C P + C D DEC L +G C CT
Sbjct: 659 CGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLCDECSLNNGGCSNHCTVVPGRGI 718
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
VCSC EG L D K+C V+
Sbjct: 719 VCSCPEGLQLNKDNKTCEIVD 739
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 100/235 (42%), Gaps = 32/235 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE CT F C G C+ + C
Sbjct: 2630 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCEPQTCTLKDFLCANGDCVSSRFWC 2689
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + C+ +C Q +C CIP WLCD DC VD +DE+
Sbjct: 2690 DGDFDC-ADGSDEMD-CVSECKEDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEEN 2742
Query: 284 ------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
K C + C +KKCIP + CD+ DC D +DE + +
Sbjct: 2743 CDRGKLTYKARPCKKDEFACT-NKKCIPVDLQCDQLDDCG-----DGSDEQGCR-ITPTE 2795
Query: 338 VLCHPNELRCGSSNQC--VALSKFCDGKP---------DCSNGEDEGPFCNNKAD 381
C N CG C + S FC KP C ED+ + N D
Sbjct: 2796 FTCEDNVNPCGDDAYCNQIKTSVFCRCKPGFQRNMKNRQCEGSEDQVLYIANDTD 2850
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 108/260 (41%), Gaps = 39/260 (15%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+ +C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D
Sbjct: 1805 NRRCIPHGKLCDGENDCGDNSDELDCKVSTCAAVEFRCADGTCIPRSAQCNQNIDC-ADA 1863
Query: 235 SDEPNTCIHQCF---------NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
SDE N C G ++C + C+ W+CD DC D D
Sbjct: 1864 SDEKNCNNTDCMYFYKLGVKTTGFIRCNSTSLCVLPAWICDGSNDCG--DYSDELKCPVQ 1921
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H+C C S +CI + W+CD + DC D DE H C N+
Sbjct: 1922 NKHKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQF 1969
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT------- 394
C SS +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 1970 AC-SSQKCISKHWICDGEDDCGDGLDESDSICGAITCAADMFSCQGSHACVPRHWLCDGE 2028
Query: 395 ---PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2029 RDCPNGSDELSIAGCAPNNT 2048
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 102/234 (43%), Gaps = 39/234 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 1759 EFECGNGECIDYQLSCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 1818
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
DC DN+DE K C + +CA CIP + C++ +DC+ D +DE
Sbjct: 1819 NDCG-----DNSDELDCKVSTCAAVEFRCA-DGTCIPRSAQCNQNIDCA-----DASDEK 1867
Query: 328 ---DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ D + + + +RC S++ CV + CDG DC + DE
Sbjct: 1868 NCNNTDCMYFYKLGVKTTGFIRCNSTSLCVLPAWICDGSNDCGDYSDE------------ 1915
Query: 385 LKC----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
LKC HKC G CP+G+ T D + DG CD +C+
Sbjct: 1916 LKCPVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 1965
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN++ P+ L +D+ + +YW D L+ + SV DGS + +
Sbjct: 3005 IEEAAMDGTLRRILVQKNLRRPTGLAVDHFSERIYWADLELSLIGSVLYDGSDSVISVSS 3064
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 3065 RQGLLHPHRI 3074
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + L++ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1494 IGKAHLDGSEKVVLISMGIVWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 1553
Query: 166 HPN 168
N
Sbjct: 1554 GSN 1556
>gi|344239540|gb|EGV95643.1| Low-density lipoprotein receptor-related protein 2 [Cricetulus
griseus]
Length = 4664
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/300 (36%), Positives = 139/300 (46%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC +G DE C CT QF C G CI ++
Sbjct: 1446 CQPTQFRC-PDHRCISPFYVCDGDKDCVDGSDEAG-CVLNCTSSQFKCADGSACIGSRYR 1503
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP+ W CD DC +D +
Sbjct: 1504 CDGVYDC-KDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDRHPDC-----IDGS 1557
Query: 281 DEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE + C C + C+ W+CD + DC DN+DE K
Sbjct: 1558 DEHNGCVYKTCSPSHFLCD-NGNCVYRPWVCDGDNDCR-----DNSDE---KDCPAPPFR 1608
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGA 398
C +C N C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1609 CPFRHWQCPGYNICINLSALCDGNFDCPNGTDESPLCNQDSCLHYNGGCTHQCVQGPFGA 1668
Query: 399 MCFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP+G Q N T+ C D DEC G C Q C N ++ C+C YTL D ++C
Sbjct: 1669 TCVCPSGYQLANDTKTCEDIDECDSPGFCSQHCVNMRGTFRCTCDPEYTLEGDRRTCKVT 1728
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 114/367 (31%), Positives = 158/367 (43%), Gaps = 63/367 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C +E +C S +C+ FCDG+ DC++ DE C CT QF C G+CI +
Sbjct: 2996 CSSSEFQCVSPRRCIPNIWFCDGEADCADQSDEPSSCAPTVNTCTANQFRCDNGRCISST 3055
Query: 222 WKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQC----ALSKKCIPHNWLCDEEMDCS-- 272
W CDG DC D SDE I C Q C +++CIP +W+CD + DCS
Sbjct: 3056 WVCDGDNDC-GDMSDEDQRHQCEIRNCSASQFACRNDRTSNRRCIPLSWVCDGDADCSDG 3114
Query: 273 ---------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCAL 299
DD D +DE + C + Q C
Sbjct: 3115 LDELQNCTRRTCSAGEFTCANGRCIMQSFRCDRRDDCGDYSDERGCSYPPCRDDQFTCQ- 3173
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSK 358
+ +CI ++CDE+ DC D +DE ++ H C P++ RC + C+ + K
Sbjct: 3174 NGRCISKFFVCDEDNDCG-----DGSDEQ--EHLCHTPEPTCPPHQFRC-DNGHCIEMGK 3225
Query: 359 FCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVD 415
C+ DC + DE G N D +C H C+ T C C G +K CVD
Sbjct: 3226 VCNHVDDCLDNSDEKGCGINECQDTSISRCDHNCTDTITSFYCSCLPGYKLMSDKRTCVD 3285
Query: 416 ADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC C Q C N SY+C C GY PDGK+C + EP +IFS+ +
Sbjct: 3286 IDECKESPQLCSQKCENVVGSYICKCAPGYIREPDGKTCRQNS--NIEPY-LIFSNRYYL 3342
Query: 475 RRIHLNG 481
R + +G
Sbjct: 3343 RNLTTDG 3349
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/338 (32%), Positives = 152/338 (44%), Gaps = 30/338 (8%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207
L V++ + ++ V C RC + C+ + CDG DC + DE C
Sbjct: 438 LRCVKASGLSTYYHTVECGSGNFRC-DNGHCIPAAWRCDGTRDCLDDTDEIGCPPHSCGT 496
Query: 208 GQFSCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
G F C + G CI SW CD DC DG+DE C + Q + +CIP + CD
Sbjct: 497 GFFLCPVEGTCISRSWVCDQEKDC-SDGADEHQNCAGTTCSSQQMACSNGQCIPREYRCD 555
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DCS D +DE + C Q+ CA + C + CD+++DC D D +
Sbjct: 556 HVSDCS-----DGSDERNCYYPTC--DQLTCA-NGACYNTSQKCDQKVDCR--DASDEAN 605
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
+D C + C S+ QC+ + CDG+ DC + DE C C L
Sbjct: 606 CTYDT--------CGGHHFTC-SNGQCINQNWVCDGEDDCQDSGDEDG-CGTGI-CSVLN 654
Query: 387 CSHKCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C ++C TP G CFCP N C+D D+C I G+CDQ C N + C C EG
Sbjct: 655 CEYQCHQTPYGGECFCPPSHIINVNDSRTCIDFDDCQIWGTCDQKCENRQGRHQCLCEEG 714
Query: 444 YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
Y L G+ C A + ASIIFS+ D+ L+G
Sbjct: 715 YILE-RGQHCKANS--SFSVASIIFSNGRDLLIGDLHG 749
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 151/330 (45%), Gaps = 44/330 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
E C ++ +C+ + C+G DC + DE + C PG F C +CIP WKCD +
Sbjct: 3816 EFSCKTNYRCIPKWEVCNGVDDCRDNSDEQGCESVPCNPGDFRCRNHRCIPLRWKCDAYD 3875
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----D 283
DC D SDE N +C + +CA +++CIP W+CD+E DC DN+DE
Sbjct: 3876 DC-GDSSDEENCVPRECSESEFRCA-NQQCIPSRWVCDQENDCG-----DNSDERDCATR 3928
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-P 342
+ C +C + CI W+CD + DC VD +DE+ F+ V C P
Sbjct: 3929 FPNGTYCPAAMFECK-NHVCIQSFWICDGDNDC-----VDGSDEELHLCFN---VPCEPP 3979
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNNKADCENLKCSHKCS 392
+ RC +S +C+ + C+G DC +G DE P + C N C +
Sbjct: 3980 HRFRCDNS-RCIYGHQLCNGVDDCGDGTDEREEHCRKPTHKPCTQTEYKCGNGNCISQHY 4038
Query: 393 PTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--G 450
C G +++ C + +EC G C Q+C N+ SY C C +G+ G
Sbjct: 4039 VCDNVDDC----GDLSDESGC-NINECEQFGICPQSCRNSKGSYECLCADGFKSMDSHFG 4093
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ C A +P ++ V IR+ +++
Sbjct: 4094 ERCAA----DGDPPLLLLPENVRIRKYNVS 4119
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 138/338 (40%), Gaps = 90/338 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N S +++ I WP+++ IDY D+LYW D+H
Sbjct: 3479 IARTGMDGTNMSVIISTKITWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 3538
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNE---L 170
TVE + DGS+ VL HP +
Sbjct: 3539 TLPHPYAITIFEDTVYWTDWNTRTVEKGNKYDGSNRVVLVNTTHRPFDIHVYHPYRQPIV 3598
Query: 171 RCGSSNQCVALSKFCDGKPD-----CSNGED-------EGPFCNAECTPGQFSCGMG-KC 217
N S C K C+ +D + C C+ QF CG KC
Sbjct: 3599 NNPCGNNNGGCSHLCLIKAGGKGFTCACPDDFQTVQLRDRTLCMPMCSSTQFLCGNNEKC 3658
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCDG DC DGSDE + C H+ C GQ QC C LC+ DC+
Sbjct: 3659 IPIWWKCDGQKDC-ADGSDESDLCPHRFCRLGQFQCR-DGNCTSPQALCNAHQDCA---- 3712
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED + H+C + + QCA +K+CIP W CD DC DN+DED S
Sbjct: 3713 -DGSDEDRVLCEHHRCESNEWQCA-NKRCIPEAWQCDSVNDCQ-----DNSDEDSSHCAS 3765
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P + RC ++ +C+ S CD DC + DE
Sbjct: 3766 RT---CKPGQFRC-NNGRCIPQSWKCDVDNDCGDYSDE 3799
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 115/243 (47%), Gaps = 33/243 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DC++G DE C + C GQF C G C
Sbjct: 3644 MCSSTQFLCGNNEKCIPIWWKCDGQKDCADGSDESDLCPHRFCRLGQFQCRDGNCTSPQA 3703
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP W CD DC DN+
Sbjct: 3704 LCNAHQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPEAWQCDSVNDCQ-----DNS 3756
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE + +
Sbjct: 3757 DEDSSHCASRTCKPGQFRCN-NGRCIPQSWKCDVDNDCG-----DYSDEPVQECMTAAYN 3810
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--------SHK 390
+ E C ++ +C+ + C+G DC + DE CE++ C +H+
Sbjct: 3811 CDNHTEFSCKTNYRCIPKWEVCNGVDDCRDNSDE-------QGCESVPCNPGDFRCRNHR 3863
Query: 391 CSP 393
C P
Sbjct: 3864 CIP 3866
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 96/347 (27%), Positives = 132/347 (38%), Gaps = 74/347 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCI 218
C P+ C QC+ CD DC +G DE P+ C F+C CI
Sbjct: 1363 CSPSAFTCVHGGQCIPSQWCCDKHNDCIDGSDEQNCPTSAPY---SCPSTSFTCDNHMCI 1419
Query: 219 PESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
P +W CD DCL DGSDE N C Q +C +CI ++CD + DC V
Sbjct: 1420 PRNWVCDTDNDCL-DGSDEKNCEASGTCQPTQFRCP-DHRCISPFYVCDGDKDC-----V 1472
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE + C + Q +CA CI + CD DC DN+DE +
Sbjct: 1473 DGSDEAGCVLN-CTSSQFKCADGSACIGSRYRCDGVYDCK-----DNSDEAGCP--TRPP 1524
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----------------- 380
+CHP+E +C C+ + CD PDC +G DE C K
Sbjct: 1525 GMCHPDEFQCQGDGTCIPNTWECDRHPDCIDGSDEHNGCVYKTCSPSHFLCDNGNCVYRP 1584
Query: 381 -------DCEN-----------LKCSHKCSPTPRGAMCF-----------CPAGQNPNKT 411
DC + +C + P +C CP G +++
Sbjct: 1585 WVCDGDNDCRDNSDEKDCPAPPFRCPFRHWQCPGYNICINLSALCDGNFDCPNGT--DES 1642
Query: 412 QCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ D CL +G C C C C GY L D K+C ++
Sbjct: 1643 PLCNQDSCLHYNGGCTHQCVQGPFGATCVCPSGYQLANDTKTCEDID 1689
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 105/217 (48%), Gaps = 30/217 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ + CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3727 CESNEWQC-ANKRCIPEAWQCDSVNDCQDNSDEDSSHCASRTCKPGQFRCNNGRCIPQSW 3785
Query: 223 KCDGFVDCLEDGSDEP-NTCIHQCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
KCD DC D SDEP C+ +N + C + +CIP +C+ DD
Sbjct: 3786 KCDVDNDC-GDYSDEPVQECMTAAYNCDNHTEFSCKTNYRCIPKWEVCN-----GVDDCR 3839
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DN+DE + C G +C + +CIP W CD DC D++DE+ N
Sbjct: 3840 DNSDEQGCESVPCNPGDFRCR-NHRCIPLRWKCDAYDDCG-----DSSDEE-------NC 3886
Query: 338 VL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C +E RC ++ QC+ CD + DC + DE
Sbjct: 3887 VPRECSESEFRC-ANQQCIPSRWVCDQENDCGDNSDE 3922
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 132/323 (40%), Gaps = 59/323 (18%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ +S + +YW D + + DGS +
Sbjct: 2747 QKIERSSLTGTNREVIVSTAF---NSFGLTVYGQYIYWTDYFTRKIYRANKYDGSDLIAM 2803
Query: 165 -----CHPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P + NQ S CD CS+ GP
Sbjct: 2804 TTRLPVQPRGISRVLKNQPQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDN 2863
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
+C + C+ QF+C G+CI E WKCD DC D SDE T H C + C
Sbjct: 2864 KYCIMDTGSRCSQSQFTCLNGRCIIEDWKCDNDNDC-GDNSDELQTLCAFHTCPSTAFTC 2922
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+P+ + CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2923 A-NGRCVPYRYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLDFVCNG 2976
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C+ DN D S C +E +C S +C+ FCDG+ DC++ DE
Sbjct: 2977 INNCN-----DNGTSDEKNCPSQT---CSSSEFQCVSPRRCIPNIWFCDGEADCADQSDE 3028
Query: 373 GPFC--------NNKADCENLKC 387
C N+ C+N +C
Sbjct: 3029 PSSCAPTVNTCTANQFRCDNGRC 3051
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++++ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4258 KIESAWMNGEHRSVLVSEDLGWPNGLSIDYLNDDRIYWSDSKEDVIETIKYDGTDRRLI 4316
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1875 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHSRRQVIA 1934
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1935 SDLVLRHPHAL 1945
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 875 KVERAFMDGSNRKDLVKTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGVQRMTVAR 934
Query: 167 PNEL 170
L
Sbjct: 935 GGSL 938
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL S D+P +
Sbjct: 2319 NGIRGIAVDWVAGNLYFTNAFVSETLIEVLRINTTYRRVLLKVSVDMPRHIVVDPKSRYL 2378
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2379 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHSTGYIYWVDDSLDIIARIHLD 2438
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2439 GGESQVV 2445
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIPES 221
P+ RC +S +C+ + C+G DC +G DE + CT ++ CG G CI +
Sbjct: 3979 PHRFRCDNS-RCIYGHQLCNGVDDCGDGTDEREEHCRKPTHKPCTQTEYKCGNGNCISQH 4037
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQC 245
+ CD DC D SDE I++C
Sbjct: 4038 YVCDNVDDC-GDLSDESGCNINEC 4060
>gi|73946682|ref|XP_533538.2| PREDICTED: very low-density lipoprotein receptor isoform 1 [Canis
lupus familiaris]
Length = 873
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGEHEFQCSTSS-CIPLSWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C + QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVMHTKCPASETQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------GPFC 376
P++ C C+ S+ C+G DC +G DE G C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + +K C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKICGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 154/375 (41%), Gaps = 92/375 (24%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R G+ C P++ +C ++ +C+ L CDG DC++G DE C F C
Sbjct: 23 RATGAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNN 81
Query: 215 GKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 271
G+C+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 82 GQCVPNRWQCDGDPDC-EDGSDENPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDC 140
Query: 272 ST----------------------------------DDIVDNTDEDWDKFHQCFNGQVQC 297
+ DD D +DE C + QC
Sbjct: 141 DSGEDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGEHEFQC 200
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVA 355
+ S CIP +W+CD++ DCS D +DE ++ + C +E +CGS +C+
Sbjct: 201 STS-SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVMHTKCPASETQCGSG-ECIH 253
Query: 356 LSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------P 395
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 254 KKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCK 313
Query: 396 RGAMCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTN 431
C P +C+D +ECL+ +G C C +
Sbjct: 314 NVNQCLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKD 373
Query: 432 THLSYVCSCTEGYTL 446
+ Y C C G+ L
Sbjct: 374 LVIGYECDCAAGFEL 388
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDVASKTISVATLDGTRRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|324499453|gb|ADY39765.1| Low-density lipoprotein receptor-related protein [Ascaris suum]
Length = 4738
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 150/310 (48%), Gaps = 26/310 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGK-CIPES 221
C N+ CG+ +C+ + CDG DC + DE +C Q+ C G+ C+P
Sbjct: 1194 CASNQFTCGNG-RCIPVYWLCDGDNDCYDNTDEDRERCPPVQCRADQYRCANGRQCVPLK 1252
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + I + C + + C S CIP NW CD +DC D
Sbjct: 1253 NHCDGQQDC-EDGSDEDSCLIQEGKCKHNEFTCVSSGLCIPINWKCDGTLDCE-----DG 1306
Query: 280 TDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---KYFS 334
+DE QC +C + +CI + WLCD E DC DN+DED +
Sbjct: 1307 SDEPTGVCSASQCPADHFKCD-NGRCIFNTWLCDGENDCG-----DNSDEDIKHGCQKSQ 1360
Query: 335 HNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCS 392
AV C + C G+ + C+ + CDGK C G DEG C + CS KC
Sbjct: 1361 QLAVRCPFEHVPCRGAPDTCIPIHNLCDGKDHCPGGTDEGGRCARDLCAADRAGCSFKCH 1420
Query: 393 PTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
+P G +C CP G Q NKT+C +ECL SC Q CT+ + CSC +GYTL D +
Sbjct: 1421 MSPDGPLCSCPFGEQLVNKTRCEPENECLDARSCSQRCTDEKHGFTCSCDDGYTLDTDKR 1480
Query: 452 SCTAVNVPQD 461
+C + QD
Sbjct: 1481 TCKVTDNVQD 1490
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/286 (36%), Positives = 138/286 (48%), Gaps = 33/286 (11%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQ---FSCGMGK-CIPESWKCDGFV 228
S C+A + CD DC++G DE P N C F C G+ C S KCDG
Sbjct: 108 SVSCIAEYQRCDNITDCADGSDEVDCPANNVSCNVNDGSVFQCADGRQCFEISKKCDGKY 167
Query: 229 DCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE ++C H CF Q +CA +CI +W+CD DC+ D +DE
Sbjct: 168 DC-RDLSDEKDSCPHNHTACFQYQFRCADHSQCIQKSWVCDGSNDCA-----DGSDEPPT 221
Query: 286 -KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+F QC G QC +K+C P + CD DC DN+DE+ + LC P +
Sbjct: 222 CEFKQCSGGDFQCK-NKRCQPRKFRCDYYDDCG-----DNSDEEGCGQY-----LCPPQQ 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPA 404
C +S C+ K CDGK DC++G DE +N C +L C C +P G C CP
Sbjct: 271 WNCPNSGHCIDEVKLCDGKNDCADGADEKNCSSNL--CPSLGCQAGCHASPSGGECTCPV 328
Query: 405 GQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSCT-EGYTL 446
G ++ C D +EC G CDQ C N + CSC E Y+L
Sbjct: 329 GYKLDERFHRTCSDINECAEWGYCDQGCQNHRPGFTCSCLGECYSL 374
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 132/294 (44%), Gaps = 24/294 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ +K CDG CS+G DE +CTPG C G CIP C
Sbjct: 3885 CSESEFRC-NDGRCIPGNKVCDGTVQCSDGLDESQCKMRQCTPGHRQCDDGTCIPAHRWC 3943
Query: 225 DGFVDCLEDGSDEPNTCIH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
D DC + SDE + H C + +C S CIP ++CD + DC D D T
Sbjct: 3944 DRRRDC-PNASDEMHCEDHPDRRACSPFEFECGNSV-CIPRKFMCDGDNDCG--DNSDET 3999
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+E+ + +CA S+ C+ LC+ DC +D D + + C
Sbjct: 4000 NEECKSASCEPPLRFRCAHSRLCLNILQLCNGFNDCGPNDYSDEHLSMCSSFSEYGD--C 4057
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNNKADCENLKCSHKCSP 393
+ +C ++ +CV S CD DC + DE G C + D N C H C+
Sbjct: 4058 TAEQFKC-ANGKCVNASLACDRNDDCGDASDEIGCAKHSGRTCESNND--NGGCKHLCTD 4114
Query: 394 TPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
G C C G PN C+D DEC + +C Q+C NT SY+C C E +
Sbjct: 4115 VAEGYYCHCREGFQPNPEDPYDCIDIDECAGNNTCTQSCLNTKGSYLCRCLEDF 4168
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 149/328 (45%), Gaps = 35/328 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCIPESWKC 224
+C++ + CDG+ DC + DE N C+ +F C +CIP++W C
Sbjct: 3024 GKCISRAFICDGEDDCGDSSDESVIHNCGNRTCSDMEFHCKSNAHLAQPKYECIPKAWLC 3083
Query: 225 DGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG V C + C C G+ +C S CI +W CD + DC +D +D
Sbjct: 3084 DGDVTCAAGEDESKELCGVEKKSCNKGEFRCQNSH-CIHASWECDGDNDC-----LDGSD 3137
Query: 282 EDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
E + + QC QCA + KCIP +W CD DC + E NA C
Sbjct: 3138 EHANCTYSQCQPEFWQCA-NHKCIPSSWKCDGNDDCDDGSDEKDCAEAIGSTAEGNA--C 3194
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRGA 398
P + +C +S +C+ +K CD DC++ DE F + + E C KC P
Sbjct: 3195 PPGQFKC-ASGECINSNKVCDRVYDCADRSDESSKCFIDECSTAEKPLCEQKCVDLPIDY 3253
Query: 399 MCFCPAG---QNPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C C G +K C D DEC S C Q C N SY CSC +GY+L D K+C
Sbjct: 3254 RCECYEGFALDKDDKKSCHDVDECEEGTSHCSQGCENKIGSYKCSCVDGYSLAHDDKTCK 3313
Query: 455 AVNVPQDEPAS-IIFSSTVDIRRIHLNG 481
VN EP ++F++ +R++ L+G
Sbjct: 3314 RVN---SEPIPWLLFANKHYLRKLTLDG 3338
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 107/217 (49%), Gaps = 24/217 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE----CTPGQFSCGMGKCIP 219
C N +RC ++ +C+ CDG DC + DE +C + C +F C +CIP
Sbjct: 1108 CPANTIRCNNTKKCIPQQYACDGDNDCGDYSDEDVKYCKSGERPVCAAKKFQCDNHRCIP 1167
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
E WKCD DC DGSDE C + C + Q C + +CIP WLCD + DC
Sbjct: 1168 EQWKCDSDNDC-GDGSDEKLEMCANSTCASNQFTCG-NGRCIPVYWLCDGDNDC-----Y 1220
Query: 278 DNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DNTDED ++ QC Q +CA ++C+P CD + DC D +DED
Sbjct: 1221 DNTDEDRERCPPVQCRADQYRCANGRQCVPLKNHCDGQQDCE-----DGSDEDSCLIQEG 1275
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C NE C SS C+ ++ CDG DC +G DE
Sbjct: 1276 K---CKHNEFTCVSSGLCIPINWKCDGTLDCEDGSDE 1309
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 101/215 (46%), Gaps = 34/215 (15%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGP------FCNAECTPGQFSC-GMGKCIPESWKCDG 226
++ +CV CDG+ DC +G DE F EC C KCIP+ + CDG
Sbjct: 1071 ANGRCVPNEWRCDGEDDCLDGSDERGSDGKPCFVEKECPANTIRCNNTKKCIPQQYACDG 1130
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDIVDN 279
DC D SDE + C +G+ +KK CIP W CD + DC D
Sbjct: 1131 DNDC-GDYSDED---VKYCKSGERPVCAAKKFQCDNHRCIPEQWKCDSDNDCG-----DG 1181
Query: 280 TDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE + C + Q C + +CIP WLCD + DC DNTDED ++
Sbjct: 1182 SDEKLEMCANSTCASNQFTCG-NGRCIPVYWLCDGDNDC-----YDNTDEDRERC---PP 1232
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C ++ RC + QCV L CDG+ DC +G DE
Sbjct: 1233 VQCRADQYRCANGRQCVPLKNHCDGQQDCEDGSDE 1267
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/376 (30%), Positives = 149/376 (39%), Gaps = 108/376 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C +RC ++N C+ + CDG DC + DE FC N C C G+CIPE+W
Sbjct: 2925 CRGVRIRCPNTNICIQPADLCDGYDDCGDKADENKLFCMNQPCATHYVRCPSGRCIPETW 2984
Query: 223 KCDGFVDCLEDGSDEPNT--------------CIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CDG DC E DE +T + QC NG KCI ++CD E
Sbjct: 2985 QCDGDNDCGEGAWDETHTNCTDANGKRICLGEYLFQCDNG--------KCISRAFICDGE 3036
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFN-----------GQVQCALSK-KCIPHNWLCDEEMDC 316
DC D++DE H C N A K +CIP WLCD ++ C
Sbjct: 3037 DDCG-----DSSDE--SVIHNCGNRTCSDMEFHCKSNAHLAQPKYECIPKAWLCDGDVTC 3089
Query: 317 STDDIVDNTDEDWDKYF-SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+ ED K C+ E RC +S+ C+ S CDG DC +G DE
Sbjct: 3090 A-------AGEDESKELCGVEKKSCNKGEFRCQNSH-CIHASWECDGDNDCLDGSDEHAN 3141
Query: 376 CN-NKADCENLKCS-HKCSP--------------------------TPRGAMCFCPAGQ- 406
C ++ E +C+ HKC P T G CP GQ
Sbjct: 3142 CTYSQCQPEFWQCANHKCIPSSWKCDGNDDCDDGSDEKDCAEAIGSTAEGNA--CPPGQF 3199
Query: 407 --------NPNKT-----QCVD----ADECLID-------GSCDQTCTNTHLSYVCSCTE 442
N NK C D + +C ID C+Q C + + Y C C E
Sbjct: 3200 KCASGECINSNKVCDRVYDCADRSDESSKCFIDECSTAEKPLCEQKCVDLPIDYRCECYE 3259
Query: 443 GYTL-RPDGKSCTAVN 457
G+ L + D KSC V+
Sbjct: 3260 GFALDKDDKKSCHDVD 3275
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 103/239 (43%), Gaps = 28/239 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCG-MGK 216
V C RC +S +C+ FC+G+ DC + DE P C+ G+F C GK
Sbjct: 3797 TVACRKGWTRCSTSYRCIPDWAFCNGQDDCRDNSDEITERCPTCD---DIGEFRCATTGK 3853
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP+ W CD DC +D + +C C + +C +CIP N +CD + CS
Sbjct: 3854 CIPKRWMCDSENDCGDDSDETDPSCGGTSRPCSESEFRCN-DGRCIPGNKVCDGTVQCS- 3911
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D DE K QC G QC CIP + CD DC + ++ D+
Sbjct: 3912 ----DGLDESQCKMRQCTPGHRQCD-DGTCIPAHRWCDRRRDCPNASDEMHCEDHPDRR- 3965
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE---NLKCSH 389
C P E CG+S C+ CDG DC + DE A CE +C+H
Sbjct: 3966 -----ACSPFEFECGNS-VCIPRKFMCDGDNDCGDNSDETNEECKSASCEPPLRFRCAH 4018
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 126/306 (41%), Gaps = 41/306 (13%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPESWK 223
E RC ++ +C+ CD + DC + DE P C C+ +F C G+CIP +
Sbjct: 3844 GEFRCATTGKCIPKRWMCDSENDCGDDSDETDPSCGGTSRPCSESEFRCNDGRCIPGNKV 3903
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD 281
CDG V C DG DE + QC G QC CIP + CD DC ++D++
Sbjct: 3904 CDGTVQC-SDGLDESQCKMRQCTPGHRQCD-DGTCIPAHRWCDRRRDCPNASDEM---HC 3958
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
ED C + +C S CIP ++CD + DC DN+DE ++ +A
Sbjct: 3959 EDHPDRRACSPFEFECGNSV-CIPRKFMCDGDNDCG-----DNSDETNEE--CKSASCEP 4010
Query: 342 PNELRCGSSNQCVALSKFCDGKPDC-------------SNGEDEGPFCNNKADCENLKCS 388
P RC S C+ + + C+G DC S+ + G + C N KC
Sbjct: 4011 PLRFRCAHSRLCLNILQLCNGFNDCGPNDYSDEHLSMCSSFSEYGDCTAEQFKCANGKCV 4070
Query: 389 HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLID-----GSCDQTCTNTHLSYVCSCTEG 443
+ R C G ++ C + G C CT+ Y C C EG
Sbjct: 4071 NASLACDRNDDC----GDASDEIGCAKHSGRTCESNNDNGGCKHLCTDVAEGYYCHCREG 4126
Query: 444 YTLRPD 449
+ P+
Sbjct: 4127 FQPNPE 4132
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
CT +F C KCIP++WKCD DC + + P C G +C+ S +CIP
Sbjct: 3760 CTAEEFRCTNHKCIPKAWKCDNDDDCGDGSDEPPECATVACRKGWTRCSTSYRCIPDWAF 3819
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
C+ + DC DN+DE ++ C + G+ +CA + KCIP W+CD E DC D
Sbjct: 3820 CNGQDDCR-----DNSDEITERCPTCDDIGEFRCATTGKCIPKRWMCDSENDCG-----D 3869
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++DE D + C +E RC + +C+ +K CDG CS+G DE
Sbjct: 3870 DSDET-DPSCGGTSRPCSESEFRC-NDGRCIPGNKVCDGTVQCSDGLDE 3916
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 125/321 (38%), Gaps = 94/321 (29%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE--------------------- 204
P +CG C+ALS C+G+PDCS+G DE P +CN
Sbjct: 2800 PYNFQCGDG-ACIALSDTCNGRPDCSDGSDEHPTYCNTRVCPERYYLCTNRRCIEVDRRC 2858
Query: 205 ---------------------CTPGQFSCGMGKCIPESWKCDGFVDCL-EDGSDE----- 237
C PGQF+C G CI E+ CDG DC E SDE
Sbjct: 2859 NNVDDCGDNSDELDCTSGSITCLPGQFACTNGHCINETKVCDGHNDCHDEKVSDENKDTC 2918
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQV 295
PN I C +++C + CI LCD DC D DE+ + C V
Sbjct: 2919 PNLPI-DCRGVRIRCPNTNICIQPADLCDGYDDCG-----DKADENKLFCMNQPCATHYV 2972
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS-----HNAVLCHPNELRCGSS 350
+C S +CIP W CD + DC + WD+ + + +C L +
Sbjct: 2973 RCP-SGRCIPETWQCDGDNDCG--------EGAWDETHTNCTDANGKRICLGEYLFQCDN 3023
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS----------HKCSP----TPR 396
+C++ + CDG+ DC + DE N C N CS H P P+
Sbjct: 3024 GKCISRAFICDGEDDCGDSSDESVIHN----CGNRTCSDMEFHCKSNAHLAQPKYECIPK 3079
Query: 397 GAMC----FCPAGQNPNKTQC 413
+C C AG++ +K C
Sbjct: 3080 AWLCDGDVTCAAGEDESKELC 3100
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 116/299 (38%), Gaps = 71/299 (23%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL----SKK 257
A C+ F C GKCI WKCDG DC DG DE + C Q QC S
Sbjct: 52 RAGCSENDFRCNDGKCIRLEWKCDGSGDC-PDGEDEKDCPHPGCKADQWQCDKYEWHSVS 110
Query: 258 CIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
CI CD +E+DC +++ N ++ QCA ++C +
Sbjct: 111 CIAEYQRCDNITDCADGSDEVDCPANNVSCNVND---------GSVFQCADGRQCFEISK 161
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
CD + DC D+ D D HN C + RC +QC+ S CDG DC++
Sbjct: 162 KCDGKYDCR--DLSDEKDS-----CPHNHTACFQYQFRCADHSQCIQKSWVCDGSNDCAD 214
Query: 369 GEDEGPFCNNKA------DCENLKCSHKCSPTPRGAMC------------------FCPA 404
G DE P C K C+N +C PR C CP
Sbjct: 215 GSDEPPTCEFKQCSGGDFQCKNKRCQ------PRKFRCDYYDDCGDNSDEEGCGQYLCPP 268
Query: 405 GQN--PNKTQCVD-------ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
Q PN C+D ++C DG+ ++ C+ ++L C G P G CT
Sbjct: 269 QQWNCPNSGHCIDEVKLCDGKNDC-ADGADEKNCS-SNLCPSLGCQAGCHASPSGGECT 325
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 57/114 (50%), Gaps = 2/114 (1%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCI 218
HN C + RC +QC+ S CDG DC++G DE P C +C+ G F C +C
Sbjct: 181 HNHTACFQYQFRCADHSQCIQKSWVCDGSNDCADGSDEPPTCEFKQCSGGDFQCKNKRCQ 240
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
P ++CD + DC D SDE + C Q C S CI LCD + DC+
Sbjct: 241 PRKFRCDYYDDC-GDNSDEEGCGQYLCPPQQWNCPNSGHCIDEVKLCDGKNDCA 293
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 139/388 (35%), Gaps = 117/388 (30%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHL-------------------------------- 148
L ++ WP++L ID+ D L+W D+HL
Sbjct: 3483 LAENDLGWPNALAIDFYSDKLFWGDAHLNEVGFMNLDGGARHHVHAKRTSHVSSMAVFDD 3542
Query: 149 -------NTVESVRVD---GSHNAVLCH----PNELR-------------CGSSNQ-CVA 180
N + +R D G + +L PN+LR CG++N C
Sbjct: 3543 FLFWSDWNLRQVMRADKWTGGNETILKTTTQLPNDLRVIHPLRQPIYSNPCGTNNGGCSH 3602
Query: 181 LSKFCDGK-------PDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPESWKCDGFVDCL 231
L G PD + C CT QF+CG KCIP+ W CDG DC
Sbjct: 3603 LCLIASGAKSYTCACPDQFVLLADNKTCEPHCTERQFACGGDDAKCIPKLWYCDGEPDC- 3661
Query: 232 EDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKF 287
DGSDEP I C G+ QCA + C LCD DC D +DE + DK
Sbjct: 3662 RDGSDEPGKDICGPRICPVGEFQCA-NHNCTRPFQLCDGNDDCG-----DGSDEQECDK- 3714
Query: 288 HQCFNGQVQCALSKKCIPHNWLC------------------DEEMDCSTDDIVDNTDEDW 329
C +C + KCIP + C + E +C+ ++ +
Sbjct: 3715 -PCDPWMFKCVATGKCIPKRFTCDGDDDCGDRSDETDIVCKNPEKNCTAEEFRCTNHKCI 3773
Query: 330 DKYFSHN----------------AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
K + + V C RC +S +C+ FC+G+ DC + DE
Sbjct: 3774 PKAWKCDNDDDCGDGSDEPPECATVACRKGWTRCSTSYRCIPDWAFCNGQDDCRDNSDEI 3833
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMC 400
C D +C+ P+ MC
Sbjct: 3834 TERCPTCDDIGEFRCATTGKCIPKRWMC 3861
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 99/228 (43%), Gaps = 27/228 (11%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLC 265
P F CG G CI S C+G DC DGSDE P C + + +++CI + C
Sbjct: 2800 PYNFQCGDGACIALSDTCNGRPDC-SDGSDEHPTYCNTRVCPERYYLCTNRRCIEVDRRC 2858
Query: 266 DEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ DC DN+DE C GQ C + CI +CD DC + +
Sbjct: 2859 NNVDDCG-----DNSDELDCTSGSITCLPGQFACT-NGHCINETKVCDGHNDCHDEKV-- 2910
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+DE+ D + + C +RC ++N C+ + CDG DC + DE NK C
Sbjct: 2911 -SDENKDT-CPNLPIDCRGVRIRCPNTNICIQPADLCDGYDDCGDKADE-----NKLFCM 2963
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
N C+ CP+G+ +T D D +G+ D+T TN
Sbjct: 2964 NQPCATH--------YVRCPSGRCIPETWQCDGDNDCGEGAWDETHTN 3003
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
R+E+A M G +R LV I WP+++ +D + +Y+ DS L+ ++ V DG+ VL
Sbjct: 1630 RIERAYMDGSDRHILVDTKIYWPNTIALDLTTNRVYFADSKLDYIDFVNYDGTGRTQVLS 1689
Query: 166 HP 167
P
Sbjct: 1690 SP 1691
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+++A + G NR +V ++I P+ LV+D N ++YW D+ L+ + VR DG
Sbjct: 2280 IQRAFLDGSNRQVIVHEHIAEPTDLVVDPNSHMVYWTDAKLDGIYRVRSDGG 2331
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+A M G +R ++ + + P+S+ +D+ +YW D + +ES DG++ +
Sbjct: 2609 RIERANMAGGDRQVIIREGVSLPASIAVDFRDQRIYWADVNRLNIESADYDGNNRRTI 2666
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 38 DNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQI-NDLLNSWDL 96
D D DK ++ + + + ++RN+ + ++ + R A + N + +WD
Sbjct: 1471 DGYTLDTDKRTCKVTDNVQDMRIYVSNRNR--IYWSDSHLENWRTFAALVENAIALAWDS 1528
Query: 97 PAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
+I+ D R +K A +G N + + + + +D+ LYW DS LNT+E
Sbjct: 1529 VDDKIYWSDIREKKIFVATRNGTNATTFIADGLDITEGISLDWVARNLYWVDSSLNTIEV 1588
Query: 154 VRVDG-SHNAVLCHPN 168
++ AVL H N
Sbjct: 1589 ASLERPGARAVLIHEN 1604
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVID-YNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E A M G++R +V + I P+S+ ID ++ +YW D + V+S+ DG+
Sbjct: 4358 EAKIECADMDGKHREVIVNELIYSPTSMAIDEAKENRIYWADPKYHKVDSILPDGTKRTT 4417
Query: 164 LCH 166
+ H
Sbjct: 4418 IVH 4420
>gi|296189847|ref|XP_002742940.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Callithrix jacchus]
Length = 845
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSTGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIEISKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVVGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---REP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 48/254 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDETPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSTGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC +G DE
Sbjct: 257 RCDGDPDCKDGSDE 270
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|426361180|ref|XP_004047800.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Gorilla
gorilla gorilla]
Length = 873
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 169/367 (46%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPNEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC+ S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCS-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPNEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++C SS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQC-SSGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|410978055|ref|XP_003995412.1| PREDICTED: very low-density lipoprotein receptor [Felis catus]
Length = 959
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 164/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C P +F+C G+CI ++
Sbjct: 199 CRINEISCGARSTQCIPVSWRCDGEHDCDSGEDEENCGNITCGPDEFTCSSGRCISRNFV 258
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 259 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCSDQSDESLEQCG 316
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C + QC S +CI W CD + DC D +DE + + C
Sbjct: 317 RQPRMHTKCPASETQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 365
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------GPFC 376
P++ C C+ S+ C+G DC +G DE G C
Sbjct: 366 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIGKVC 424
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + +K C D D
Sbjct: 425 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYACDCAAGFELIDKKICGDID 484
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 485 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 540
Query: 478 HL 479
L
Sbjct: 541 GL 542
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 151/365 (41%), Gaps = 92/365 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C ++ +C+ L CDG DC++G DE C F C G+C+P W+C
Sbjct: 119 CEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNNGQCVPSRWQC 177
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 178 DGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGEHDCDSGEDEENCG 236
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC+ S CIP +
Sbjct: 237 NITCGPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS-SCIPLS 295
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D +DE ++ + C +E +CG S +C+ CDG PD
Sbjct: 296 WVCDDDADCS-----DQSDESLEQCGRQPRMHTKCPASETQCG-SGECIHKKWRCDGDPD 349
Query: 366 CSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAG 405
C +G DE C ++ +CE+ C H +C+ C P
Sbjct: 350 CKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGK 409
Query: 406 QNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCT 441
+C+D +ECL+ +G C C + + Y C C
Sbjct: 410 FKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYACDCA 469
Query: 442 EGYTL 446
G+ L
Sbjct: 470 AGFEL 474
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C P QF C G+CI WKCDG DC DGSDE N C C + +C+P
Sbjct: 117 AKCEPSQFQCTNGRCITLLWKCDGDEDCA-DGSDEKNCVKKTCAESDFVCN-NGQCVPSR 174
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE ++ H C ++ C A S +CIP +W CD E DC +
Sbjct: 175 WQCDGDPDCE-----DGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGEHDCDSG 229
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N + C P+E C SS +C++ + C+G+ DCS+G DE
Sbjct: 230 EDEENCGN----------ITCGPDEFTC-SSGRCISRNFVCNGQDDCSDGSDE 271
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L A+ L NS DL
Sbjct: 583 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 641
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 642 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 701
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 702 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 729
>gi|390457920|ref|XP_002742941.2| PREDICTED: very low-density lipoprotein receptor isoform 2
[Callithrix jacchus]
Length = 873
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSTGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIE 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVVGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---REP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 48/254 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDETPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSTGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC +G DE
Sbjct: 257 RCDGDPDCKDGSDE 270
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|397505726|ref|XP_003823401.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Pan
paniscus]
Length = 845
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|91521930|dbj|BAE93218.1| vitellogenin receptor [Rhyparobia maderae]
Length = 1818
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 154/330 (46%), Gaps = 33/330 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECT-PGQFSCGMGKCIPES 221
C N +C S C++ CDG DC++G DE ++C P F C G+CI S
Sbjct: 30 CPENAFKCHSDGTCISGYHHCDGHVDCNDGSDEINCEHAQSQCLEPRWFRCRTGRCISSS 89
Query: 222 WKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STD 274
+CD DC D SDE + + +C + C CIP +W+CD + DC TD
Sbjct: 90 LRCDTDDDC-GDWSDEEDCFPTVSEPARCKKDEWHCINDNNCIPTDWVCDGKQDCMDGTD 148
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
++ + D C N CIP + CD DC D +DE
Sbjct: 149 ELQGCSSVDCSDGFVCNN--------HHCIPVTFHCDGSDDCG-----DGSDERNCSSIL 195
Query: 335 H---NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHK 390
H N C + C++L + CDG +C + DEG CN +KA C+ +KC H
Sbjct: 196 HILPEDCTHERNFHLCRDNRTCISLDELCDGVRNCPDYSDEGIKCNESKAACKAIKCDHL 255
Query: 391 CSPTPRGAMCFCPAGQNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C PTPRGA+C C G K + C+D DECL G CDQ C N SY C C EGY L D
Sbjct: 256 CVPTPRGAICVCKVGYTMAKNKTCIDIDECLKYGICDQKCKNLPGSYSCYCDEGYFLADD 315
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
SC A +P ++F+ST IR +L
Sbjct: 316 NHSCKATGA---DPL-LLFASTNQIRGFYL 341
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 152/347 (43%), Gaps = 58/347 (16%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+ +C+ + CD PDC + DE C G + C +G CIP +W CDG DC+ DG
Sbjct: 1030 TGECIDILDRCDLVPDCRDASDEENCEGVTCAEGHYRCVVGVCIPYTWVCDGQSDCV-DG 1088
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE + C G C + +CI + LC+ + DC D D + C +
Sbjct: 1089 SDEKDCSPITCDAGSFSCN-NGRCIDRHLLCNGDNDCG--DYSDEMECKRPTMVVCQPTE 1145
Query: 295 VQCALSKK----CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS---------------- 334
+ C K C+P + C++ +C D D+ D F
Sbjct: 1146 IPCLSHNKTVISCVPSSARCNDVAECPLGDDERACDKCLDFQFRCSNGRCIPQEWTCDKT 1205
Query: 335 --------HNAVLCHPNELRCGS----------SNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ VLCH + + + + C+++S CDG+ DCS+G DEG C
Sbjct: 1206 DDCDDGSDEDPVLCHEHSTQQSTPGPCREYSCKNGDCISMSFVCDGRKDCSDGSDEGGLC 1265
Query: 377 NN----KADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCT 430
++ K CE++ C TPRG C C G + ++C D DEC + +C Q C
Sbjct: 1266 DSSCLGKDPCEDI-----CLKTPRGPRCKCSHGFALLSDGSRCQDIDECDMQ-ACAQVCH 1319
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
N S+ C+C G+ LR D SC AV ++ +F + +IRR+
Sbjct: 1320 NKPGSFSCACDPGFELRSDRISCKAVGRGKE----FLFVTGKEIRRV 1362
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 99/209 (47%), Gaps = 20/209 (9%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C ++ +C N C+ C+G+ DC +GEDE + +C+ +FSC G+CIP
Sbjct: 942 ICSEDKFKCKEDNLCIPRDFRCNGRRDCPSGEDELDCKSDKCSDTEFSCKNGQCIPGDKL 1001
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD DC+ DGSDE N C QC + +CI CD DC D +DE+
Sbjct: 1002 CDDEKDCI-DGSDEKN-CQKCSEETDFQCR-TGECIDILDRCDLVPDCR-----DASDEE 1053
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C G +C + CIP+ W+CD + DC VD +DE + + C
Sbjct: 1054 NCEGVTCAEGHYRCVVG-VCIPYTWVCDGQSDC-----VDGSDEK-----DCSPITCDAG 1102
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C+ C+G DC + DE
Sbjct: 1103 SFSC-NNGRCIDRHLLCNGDNDCGDYSDE 1130
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 66 NQSLC-FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
N SLC I +++ R N+ L W I + KAGM G N V+
Sbjct: 427 NGSLCTVIVNEDIEKPRAIALLPNEGLMFWTDWGKSI------IAKAGMDGSNPKEFVSS 480
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+++P+ + +DY+ LYW D + +ES+++DGS ++
Sbjct: 481 GLEYPNGIAVDYHYSRLYWVDGKIAVIESIKLDGSDRRLI 520
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 91 LNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
+N W + P L +A M+GENR + + ++ + + +D+ + +Y D H NT
Sbjct: 1483 VNKWRIDVPA-----SVLLRADMNGENRMEVASDHMMLVNGIALDFIRKKIYIADEHTNT 1537
Query: 151 VESVRVDGSHNAVLCHPNELR 171
+E + GS ++ ++
Sbjct: 1538 IECMSYSGSDRHLIVSSEHVK 1558
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 28/128 (21%)
Query: 163 VLCHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
V+C P E+ C S N+ CV S C+ +C G+DE C+ +C QF C G+CI
Sbjct: 1139 VVCQPTEIPCLSHNKTVISCVPSSARCNDVAECPLGDDERA-CD-KCLDFQFRCSNGRCI 1196
Query: 219 PESWKCDGF-----------VDCLEDGSDE--PNTCI-HQCFNGQVQCALSKKCIPHNWL 264
P+ W CD V C E + + P C + C NG CI +++
Sbjct: 1197 PQEWTCDKTDDCDDGSDEDPVLCHEHSTQQSTPGPCREYSCKNGD--------CISMSFV 1248
Query: 265 CDEEMDCS 272
CD DCS
Sbjct: 1249 CDGRKDCS 1256
>gi|397505724|ref|XP_003823400.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pan
paniscus]
Length = 873
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|326670753|ref|XP_001920039.3| PREDICTED: low-density lipoprotein receptor-related protein 1B [Danio
rerio]
Length = 4697
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 154/319 (48%), Gaps = 30/319 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+++ CD DC + DE C C GQ+ C G+CIP+ W CDG DC D
Sbjct: 1104 ANGRCISMKWHCDSDDDCGDNSDEAG-CVHFCANGQYKCTSGRCIPDHWACDGDNDC-GD 1161
Query: 234 GSDEPNTCIH--------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
SDE TC +C + C CIP W CD + DC +D D T+
Sbjct: 1162 FSDENVTCAGVAPALPPVECSAEEFHCRADGTCIPERWRCDGDKDC--EDGSDETNCKGV 1219
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K + C S KCI +W+CD + DC D +DE+ S + +C P
Sbjct: 1220 KRMCDPQAKFTCKTSGKCISKSWVCDGDDDCE-----DRSDEE-----SCVSSICKPPTQ 1269
Query: 346 RCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C + S+ C+ +K CDG+ DC++ DEGPFC N CSH+CS P +G +C CP
Sbjct: 1270 PCANDSSICLPQNKICDGRMDCADRSDEGPFCGECLQ-GNGGCSHQCSVIPSKGVVCSCP 1328
Query: 404 AGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
AG + + C D C C Q C + CSC G+ L DG+SC + + +
Sbjct: 1329 AGLHLGSDNRTCEAVDYCSAHLKCSQICEQHKTTVKCSCYPGWRLDADGESCHSTDPFE- 1387
Query: 462 EPASIIFSSTVDIRRIHLN 480
A +IFS +IRRI L+
Sbjct: 1388 --AFVIFSIRHEIRRIDLH 1404
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 156/373 (41%), Gaps = 76/373 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C C S N C++ CDG+ DC +G DE C++ C QF+C KCI + W C
Sbjct: 2810 CAEGHFACPSGN-CISSVWLCDGQKDCEDGADEFQ-CDSSCLWNQFACSKNKCIAKQWLC 2867
Query: 225 DGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DG DC + + + C C G C S C+P WLCD E DC D +DE
Sbjct: 2868 DGEDDCGDGVDESVDLCGSVTCAPGLFSCPGSYACVPKRWLCDGERDCP-----DGSDEL 2922
Query: 284 WDKF----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ C +C L+K CIP ++CD + DC D +DE + +
Sbjct: 2923 AAAGCAPNNTCDENSFRC-LNKGCIPKRFVCDHDNDCG-----DGSDESLECVYRS---- 2972
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF------------------------ 375
C P+E RC ++ CDG PDC + DE P
Sbjct: 2973 CGPDEFRCADGRCLLSAQWECDGYPDCPDHSDELPLNLKCLAAESLCNSSFFMCSNGRCI 3032
Query: 376 -----CNNKADCENLK-----------------CSHKCSPTPRGAMCFCPAG---QNPNK 410
C+ K DC + C+ C P G C C G +N +
Sbjct: 3033 SEKSLCDMKDDCGDRSDEKNCNVNECLNRRVSGCTQDCQDLPVGYKCKCWPGFHLKNDGR 3092
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL-RPDGKSCTAVNVPQDEPASIIFS 469
T CVD DEC C Q CTNT+ SY C C +GY R D SC +++ E +I +
Sbjct: 3093 T-CVDIDECSTTLPCSQNCTNTYGSYKCLCVDGYEASRKDPNSCKSLSA---EEPFLILA 3148
Query: 470 STVDIRRIHLNGS 482
+IR++ ++GS
Sbjct: 3149 DLHEIRKLSVDGS 3161
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
V C N ++C S +C+ +K C+G DC +G DEG C + C L C + C T
Sbjct: 198 VRCPLNHIQCVGSRKCIHFNKLCNGAKDCEDGFDEGVHCRELLSACHELHCRYGCIMTRN 257
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G CFC G + C D DEC + G+C QTC NT+ S+ CSCT+G++L+P+ +SC
Sbjct: 258 GTFCFCADGFEVGEDGRSCRDHDECAMYGTCSQTCMNTYGSFRCSCTDGFSLQPNRRSCI 317
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A + P + PA+++ + +I LNGS
Sbjct: 318 AKHEPGESPAALLIGGSDNIIITALNGS 345
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 105/212 (49%), Gaps = 16/212 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C SN+C+ CDG DC + EDE C+A+ C GQF+CG G+C+PE+W
Sbjct: 1014 CPIDQFKC-PSNRCIPKRWLCDGADDCGDNEDESNKTCSAQPCRAGQFTCGNGRCVPEAW 1072
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNG--QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+CD DC D SDE +C Q CA + +CI W CD + DC DN+
Sbjct: 1073 RCDQDDDC-GDMSDESTSCSFPTCEALSQFSCA-NGRCISMKWHCDSDDDCG-----DNS 1125
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE H C NGQ +C S +CIP +W CD + DC D D + V C
Sbjct: 1126 DEA-GCVHFCANGQYKCT-SGRCIPDHWACDGDNDCG--DFSDENVTCAGVAPALPPVEC 1181
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E C + C+ CDG DC +G DE
Sbjct: 1182 SAEEFHCRADGTCIPERWRCDGDKDCEDGSDE 1213
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 152/397 (38%), Gaps = 98/397 (24%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER--------- 107
LA+++ +N C ++++ + V +L S L P LD +
Sbjct: 3219 ALAVDWIGKNLYWCDVERKTLE-VSKSNGLYPTILVSSGLKNPTDLALDAQTGYVFWIDC 3277
Query: 108 -----LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------- 137
+ + GM G+ +S +V K I PS+L IDY
Sbjct: 3278 CENPHVGRIGMDGQGQSVIVNKEIYSPSALTIDYTNKRIYWADDNHILFANMDGSQRHRV 3337
Query: 138 --------------QDILYWCDSHLNTVESVRVDGSHNAV-------------LCHPNEL 170
+D +YW D ++ NAV + HP
Sbjct: 3338 PHDHIQGVMGLTLFEDFIYWTDGKSKSLRRAHKTTGANAVELLNSWQAIKSVIVYHPLRQ 3397
Query: 171 RCGSSNQCVALSKFCDGKPDCSNG-------------EDEGPFCNAECTPGQFSCGMGKC 217
+QC + C S G + C + CT QF CG +C
Sbjct: 3398 PEVPKHQCQVANGGCSHLCLLSPGGGHKCACPTNFYLAADNKTCLSNCTASQFRCGTDEC 3457
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP WKCD DC DGSDEP C +C G+ QC +P ++CD E DC
Sbjct: 3458 IPFWWKCDTVDDC-GDGSDEPADCPEFKCQPGRFQCGTGLCALP-PFICDGENDCG---- 3511
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + C +GQ +C+ +KCIP N C+ + DC D D TD
Sbjct: 3512 -DNSDEANCDTYICLSGQFKCSRKQKCIPLNLRCNGQDDCG--DGEDETD--------CP 3560
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P++ +C +S C++ CD PDC++G DE
Sbjct: 3561 ESTCSPDQFQCKASMHCISKLWVCDEDPDCADGSDEA 3597
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 138/335 (41%), Gaps = 68/335 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA---ECTPGQFSCGMGKCIPES 221
C ++ +C +N C++ CDG+ DC GEDE C+ ++ C G C+ S
Sbjct: 3681 CAEDQFQC-HNNLCISRKWLCDGQEDCKTGEDERNCLGTVLPSCSLNEYVCASGGCVSAS 3739
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CDG +CL D SDE + C+ +C + C C+P W CD+ DC VD++D
Sbjct: 3740 LRCDGHDNCL-DSSDEMD-CVKECREDEFLCKNHAHCVPKRWRCDDIFDC-----VDHSD 3792
Query: 282 ED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------------------- 317
E+ D F C + C + C H W+CD E DC
Sbjct: 3793 EENCSHDAFF-CRPDEFICN-NTLCKLHVWVCDGEDDCGDNSDEDPDMCAKLPCPPARPY 3850
Query: 318 -----------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
D+ DN+DED H C E C S+ +C+ C
Sbjct: 3851 RCRNDRVCLRLDQICNNVDNCGDNSDEDECGRLIHKPKPCGKAEFTC-SNRKCIPAQLQC 3909
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP---------TPRGAMCFCPAG--QNPN 409
D DC +G + C KA C + +P T A+C C G +N
Sbjct: 3910 DLFDDCGDGGSDEQDC--KASSNGDICGKRMNPCGEDAVCNHTNTNAICHCKPGFQRNLR 3967
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+C + +ECL G+C CTNT SY C+C + Y
Sbjct: 3968 SRKCEEINECLYFGTCSHYCTNTKGSYKCTCDKNY 4002
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 99/211 (46%), Gaps = 23/211 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3564 CSPDQFQCKASMHCISKLWVCDEDPDCADGSDEANCDEKTCGPHEFRCENNNCIPDHWRC 3623
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC ++ +E P TC H+ F CA + CI + CD + DC+ DN+D
Sbjct: 3624 DSQNDCGDNSDEEHCKPVTCNHKDF----ACA-NGDCISARFRCDGDYDCA-----DNSD 3673
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + H C Q QC + CI WLCD + DC T ED C
Sbjct: 3674 EKDCETH-CAEDQFQCH-NNLCISRKWLCDGQEDC-------KTGEDERNCLGTVLPSCS 3724
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
NE C S CV+ S CDG +C + DE
Sbjct: 3725 LNEYVCASGG-CVSASLRCDGHDNCLDSSDE 3754
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CVA S+FCDG DC + DE N C + SC G CIP S C+ +DC D SD
Sbjct: 2691 RCVANSRFCDGIDDCGDNSDEAFCNNVTCAASESSCQDGTCIPISSWCNQVIDC-ADASD 2749
Query: 237 EPNTCIHQCFNGQ---------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C + V C + C+ H+WLCD DC D D + +
Sbjct: 2750 EKNCNHTDCTDFYRIGVAEKVFVSCNTTSLCVHHSWLCDGANDCG--DYADERNCQVSQG 2807
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C G C S CI WLCD + DC D DE F ++ C N+ C
Sbjct: 2808 QKCAEGHFACP-SGNCISSVWLCDGQKDCE-----DGADE-----FQCDSS-CLWNQFAC 2855
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S N+C+A CDG+ DC +G DE
Sbjct: 2856 -SKNKCIAKQWLCDGEDDCGDGVDE 2879
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 85 AQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI 140
A + D LNSW D E+ R+EKA M G NR VT N+ WP+ L +D+
Sbjct: 777 AIVVDPLNSWMYWTDWEEDEVNDSIGRIEKAWMDGSNRKIFVTSNMLWPNGLTLDHGTST 836
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
+YWCD++ + +E + ++G+ V+ EL
Sbjct: 837 MYWCDAYYDHIEKIYLNGTGRMVVYSGREL 866
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCDG 226
E CG+ +C+ CDG C + DE +C N C G C +C+ S CDG
Sbjct: 2643 EFECGNG-ECIDYQLTCDGIAHCKDKSDEKMQYCDNRSCRKGHRPCYNRRCVANSRFCDG 2701
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKK------CIPHNWLCDEEMDC---STDDIV 277
DC D SDE F V CA S+ CIP + C++ +DC S +
Sbjct: 2702 IDDC-GDNSDEA-------FCNNVTCAASESSCQDGTCIPISSWCNQVIDCADASDEKNC 2753
Query: 278 DNTD-EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++TD D+ + V C + C+ H+WLCD DC D DE
Sbjct: 2754 NHTDCTDFYRIGVAEKVFVSCNTTSLCVHHSWLCDGANDCG-----DYADE--RNCQVSQ 2806
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C C S N C++ CDG+ DC +G DE
Sbjct: 2807 GQKCAEGHFACPSGN-CISSVWLCDGQKDCEDGADE 2841
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 67/149 (44%), Gaps = 14/149 (9%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTP-GQFSCGM-GKCI 218
V C E C + C+ CDG DC +G DE C P +F+C GKCI
Sbjct: 1179 VECSAEEFHCRADGTCIPERWRCDGDKDCEDGSDETNCKGVKRMCDPQAKFTCKTSGKCI 1238
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCSTDDIV 277
+SW CDG DC ED SDE + C CA S C+P N +CD MDC+
Sbjct: 1239 SKSWVCDGDDDC-EDRSDEESCVSSICKPPTQPCANDSSICLPQNKICDGRMDCA----- 1292
Query: 278 DNTDEDWDKF-HQCFNGQVQCALSKKCIP 305
D +DE F +C G C+ IP
Sbjct: 1293 DRSDE--GPFCGECLQGNGGCSHQCSVIP 1319
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E++ M G R L+ K ++ P+ L IDY +YW D+ L+ + SVR DGS V+
Sbjct: 4181 IEESAMDGSMRRVLLDKKLRRPTGLAIDYFSQRVYWADAELSVIGSVRFDGSDTLVV 4237
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 70/178 (39%), Gaps = 69/178 (38%)
Query: 53 NGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQ---------------------INDLL 91
NGTH L+FNH+ +S+C++ SS +LRCA+ ++ L
Sbjct: 356 NGTH--GLDFNHKEESVCWVTSSE-SSGQLRCARMKKASGFTKEQEVKTVQNLHDVDQLT 412
Query: 92 NSW-------------------------------DLPAPEIFPLD--------------E 106
W DL P+ LD
Sbjct: 413 FDWLTGNFYFVDQASDRIFVCNQLGDTCVTVVDLDLLNPKAIALDPLMGMLFFTDYGNVA 472
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+LE+ M G NR+ LV ++ P+++ +D + ++YW D++L+ +E V +G + +
Sbjct: 473 KLERCNMDGTNRTRLVDYKVERPTAVALDLVKKLVYWADAYLDYIEMVDYNGKNRHTI 530
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ +A + G ++ LV+ I WP+ + IDY ++ LYWCD+ + +E + ++
Sbjct: 2149 IGRARLDGSDQVTLVSSGIAWPNGITIDYEENRLYWCDARTDKIERINLE 2198
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 120/312 (38%), Gaps = 57/312 (18%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+W+ P I ++ + G N +++ ++ P+ L ID+ + LY+ D L +E
Sbjct: 2464 NWNEQRPSIM-------RSTLAGNNMKVIISTDVFTPNGLTIDHKAEKLYFSDGSLGKIE 2516
Query: 153 SVRVDGSHNAVLC------------HPNELRCG--SSNQCVALSKFCDGKPDCSNGE-DE 197
DGSH V+ H N + + + +KF G+ +
Sbjct: 2517 RCEYDGSHRHVIVRSGPGTFFGLAIHGNYIFWSDWTRRAVLRTNKFTGGETKVLRADIPH 2576
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQC- 245
P +C + C ++ C DG V+C G + N C+ +
Sbjct: 2577 QPMGIIAVAKDTNNCELSPCRVQNGGCGDLCLLTPDGTVNCSCRGERVLLDDNRCVSKTS 2636
Query: 246 ---FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCALS 300
+ + +C + +CI + CD C D +DE C G C +
Sbjct: 2637 SCNIHTEFECG-NGECIDYQLTCDGIAHCK-----DKSDEKMQYCDNRSCRKGHRPC-YN 2689
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
++C+ ++ CD DD DN+DE + N V C +E C C+ +S +C
Sbjct: 2690 RRCVANSRFCD-----GIDDCGDNSDEAF-----CNNVTCAASESSC-QDGTCIPISSWC 2738
Query: 361 DGKPDCSNGEDE 372
+ DC++ DE
Sbjct: 2739 NQVIDCADASDE 2750
>gi|426361178|ref|XP_004047799.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Gorilla
gorilla gorilla]
Length = 845
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 169/367 (46%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPNEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC+ S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCS-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPNEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++C SS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQC-SSGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|297684503|ref|XP_002819869.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pongo
abelii]
Length = 873
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTS-SCIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE H C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESTEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPSEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SVDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|403289094|ref|XP_003935703.1| PREDICTED: very low-density lipoprotein receptor isoform 2 [Saimiri
boliviensis boliviensis]
Length = 873
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 158/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C ++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEASQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCSNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDETPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECLI +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|403289092|ref|XP_003935702.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Saimiri
boliviensis boliviensis]
Length = 845
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGTHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 158/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C ++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEASQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCSNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDETPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGTHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECLI +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLINNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|348507663|ref|XP_003441375.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oreochromis niloticus]
Length = 4563
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 107/201 (53%), Gaps = 8/201 (3%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE+ D C PNE
Sbjct: 37 DSPRTCSPKQFVCKDGVTCISKGWRCDREKDCP-----DGSDEEPDVCPHSTVSRCPPNE 91
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
+CG + C+ +SK C+G PDC++G DEGP C +C ++ C C+ TP G C+C
Sbjct: 92 YQCGGTELCIHMSKLCNGVPDCTDGWDEGPHCREYTTNCSHMGCKEHCAVTPAGPACYCK 151
Query: 404 AGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G +P+ C D DEC + G+C Q+CTNT SY CSC EGY +PD +SC A NVP +
Sbjct: 152 TGYEISPDGKTCKDFDECSLYGTCSQSCTNTEGSYTCSCVEGYLSQPDNRSCKAKNVPVE 211
Query: 462 EPASIIFSSTVDIRRIHLNGS 482
++ +++ +I L+G+
Sbjct: 212 RLPVLLIANSQNINATFLSGT 232
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/358 (31%), Positives = 158/358 (44%), Gaps = 66/358 (18%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC NG DE C+ C+ QF CG +CIP W CDG DC D
Sbjct: 2711 SGRCIPMSWTCDKENDCENGADEA-HCDKFCSAAQFECGNHRCIPNRWVCDGADDC-GDS 2768
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-CFN 292
SDE + C C QC S +CIP W+CD + DC D D + + F+ C +
Sbjct: 2769 SDEDSKCKTKTCSPETFQCPESHRCIPKRWMCDGDKDCP--DGADESVKAGCYFNNTCSS 2826
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ C +++CIP +++CD + DCS D +DE + + C PNE RC +
Sbjct: 2827 NEFMCQ-NRQCIPKHFVCDHDNDCS-----DGSDESQECEYP----TCGPNEFRCANGRC 2876
Query: 353 CVALSKFCDGKPDCSNGEDEGP-----------------------------FCNNKADCE 383
+ S CDG DC + DE P C++K DC
Sbjct: 2877 LIKNSWECDGDFDCHDHSDEAPKNPRCTGPEKKCNDTTYICNNGNCVNETLLCDHKDDCG 2936
Query: 384 NLK-----------------CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGS 424
+ CS C G C C G ++ C+D DEC
Sbjct: 2937 DGSDELNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFHLKDDRKTCIDIDECTTTYP 2996
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C Q C NTH S+ C C EG+ L P+ T DE +IF++ +R+++L+GS
Sbjct: 2997 CTQRCINTHGSFHCLCVEGFQLSPENP--TICKSTSDEEPFLIFANRYYLRKLNLDGS 3052
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 112/323 (34%), Positives = 156/323 (48%), Gaps = 39/323 (12%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIP+ W CDG DC D
Sbjct: 996 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSAQFKCNSGRCIPDYWTCDGDNDC-GD 1053
Query: 234 GSDEPNT-CIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-- 283
SDE N C +Q C + QC + CIP W CD + DC +D +DE
Sbjct: 1054 YSDETNANCTNQATRPPGGCHTDEFQCRMDGLCIPLRWRCDGDTDC-----MDMSDEKNC 1108
Query: 284 WDKFHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
H C + C S +CI W+CD + DC DN+DED + A++C
Sbjct: 1109 EGVTHMCDPAVKFGCRDSARCISKAWVCDGDSDCE-----DNSDED-----NCEALVCKL 1158
Query: 343 NELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMC 400
+ C + S C+ K CDG DC +G DE C+ +N +CSH C+ P G +C
Sbjct: 1159 SHHVCANDSTICLPAEKLCDGADDCPDGSDE-KLCD-LCSLDNGECSHNCTVAPGEGVIC 1216
Query: 401 FCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
CP G NKT C C C Q C S +CSC +G+ L PD ++C + +
Sbjct: 1217 SCPLGMELGADNKT-CQIQSFCAKHLKCSQRCEQNKFSVICSCYDGWELEPDKENCKSTD 1275
Query: 458 VPQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI LN
Sbjct: 1276 PFK---PFIIFSNRHEIRRIDLN 1295
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3417 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPNQFQCTITKRCIPRVW 3476
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3477 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 3533
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DED C
Sbjct: 3534 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----KCVPRQCS 3581
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C+ K D + +C +
Sbjct: 3582 ESEFSC-TNGRCIAGRWKCDGDHDCADGSDENG-CDVKCDRDQFQCKN 3627
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 142/340 (41%), Gaps = 77/340 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +FSC G+CI WKC
Sbjct: 3541 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDKCVPRQCSESEFSCTNGRCIAGRWKC 3599
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-- 282
DG DC DGSDE N C +C Q QC + CIP W CDE+ DC +D +DE
Sbjct: 3600 DGDHDC-ADGSDE-NGCDVKCDRDQFQCK-NGHCIPLRWRCDEDPDC-----MDGSDEES 3651
Query: 283 -DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
D C + QC + C P W+CD E DC DN+DE+ ++ C
Sbjct: 3652 CDSGAGRHCPQDEFQCN-NTLCKPLGWMCDGEDDCG-----DNSDENPEQCVKFQ---CP 3702
Query: 342 PN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFC--------------- 376
P + RC + C+ +SK CDG +C + DE P C
Sbjct: 3703 PTRQFRCHNDRVCLPVSKRCDGVNNCGDNSDELNCCEWSTSKPACQKDEFGCSNGRCISS 3762
Query: 377 ----NNKADCEN-----LKCSHK---------------------CSPTPRGAMCFC-PAG 405
N DCE+ + C+ K C + C C P
Sbjct: 3763 VLRCNYFNDCEDYGSDEVNCNKKDTVLNDCRSNRTVCGDGDEAHCVVNGTDSFCSCKPGF 3822
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
+ + +C D +EC G C C NT SY CSC + ++
Sbjct: 3823 TSSGRNRCQDKNECKEFGVCSHICNNTKGSYKCSCHKYFS 3862
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 148/363 (40%), Gaps = 91/363 (25%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
++E+A M G NR+ +T K + WP+ L +D Q ILYW D++ + +E V ++ S
Sbjct: 693 KIERAWMDGSNRNVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIEMVYLNSSGRKTVY 752
Query: 160 ------HNAVLCHP------NELRCGS--------------------------------- 174
H LCH NE R GS
Sbjct: 753 EGQELNHAFGLCHYKHFLFWNEYRSGSIYKLDTTTGTATLLRNERPPIFEIRMYDAQQQQ 812
Query: 175 -SNQCVALSKFCD-------GKPDCSNGEDE------GPFCNA--------ECTPGQFSC 212
SN C + C G C+ ED+ C A +C PG+F+C
Sbjct: 813 GSNACRVNNGGCSSLCLAIPGGRQCACAEDQVLNKTDNTSCKANPSYVPPPQCQPGEFAC 872
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + C H C + +C + +CIP WLCD + DC
Sbjct: 873 KNNRCIQERWKCDGDNDCLDNSDEALELCYQHTCSADRFKCK-NNRCIPLRWLCDGDNDC 931
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D+ NT C Q CA S +CIP +W CD + DC D +DE
Sbjct: 932 GNDEDESNTTC---SARTCPPNQYSCA-SGRCIPVSWTCDLDDDCG-----DRSDEPASC 982
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHK 390
+ C P ++ +C+ ++ CD DC + DE C++ KC S +
Sbjct: 983 AYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSAQFKCNSGR 1037
Query: 391 CSP 393
C P
Sbjct: 1038 CIP 1040
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 140/342 (40%), Gaps = 72/342 (21%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+C + C A S CDG DC + DE +C F+C G+CIP SW CD
Sbjct: 2665 KCEFTTLCYAPSWQCDGANDCGDFSDERNCPGSGKTKCPTPFFACPSGRCIPMSWTCDKE 2724
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-K 286
DC E+G+DE + C C Q +C + +CIP+ W+CD DC D++DED K
Sbjct: 2725 NDC-ENGADEAH-CDKFCSAAQFECG-NHRCIPNRWVCDGADDCG-----DSSDEDSKCK 2776
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNE 344
C QC S +CIP W+CD + DC D DE YF++ C NE
Sbjct: 2777 TKTCSPETFQCPESHRCIPKRWMCDGDKDCP-----DGADESVKAGCYFNNT---CSSNE 2828
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------NKADCENLKCSHKCS------ 392
C + QC+ CD DCS+G DE C N+ C N +C K S
Sbjct: 2829 FMC-QNRQCIPKHFVCDHDNDCSDGSDESQECEYPTCGPNEFRCANGRCLIKNSWECDGD 2887
Query: 393 --------PTPRGAMC------------FCPAGQNPNKTQCVDADECLIDGS-------- 424
P+ C C G N+T D + DGS
Sbjct: 2888 FDCHDHSDEAPKNPRCTGPEKKCNDTTYICNNGNCVNETLLCDHKDDCGDGSDELNCFIN 2947
Query: 425 ---------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C + + + C C G+ L+ D K+C ++
Sbjct: 2948 ECLNSKLSGCSQLCEDLKIGFKCRCHPGFHLKDDRKTCIDID 2989
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 129/346 (37%), Gaps = 84/346 (24%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D I+ D R + A + G +R ++ ++I P + ++ +YW D ++
Sbjct: 3202 DFINDRIYWADAREDYIAFASLDGTSRHTVLAQDI--PHIFAMTLFEEYIYWTDWETKSI 3259
Query: 152 ESV-RVDGSHNAVLC----------------------HPNELRCGSSNQCVALSKFCDGK 188
+ G++ +L HP + G + LS K
Sbjct: 3260 NRAHKTLGTNKTMLISTLHRPMDVHIYHPYRQPDVEGHPCQTNNGGCSNLCLLSPGGGYK 3319
Query: 189 PDCSNG---EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC--------------- 230
C +G C + CT QF C KCIP WKCD DC
Sbjct: 3320 CACPTNFYLAADGKHCLSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPADCPEFRC 3379
Query: 231 ------------------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+D SDE N IH C Q +C+ +CIP + C+
Sbjct: 3380 RPGQFQCGTGICTNPAYICDGDNDCQDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCN 3439
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ +C D DE C Q QC ++K+CIP W+CD + DC VD +D
Sbjct: 3440 GQDNCG-----DGEDEKDCPEVTCAPNQFQCTITKRCIPRVWVCDRDNDC-----VDGSD 3489
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E + + C +E RC S +C+ CDG+ DC + DE
Sbjct: 3490 EP----ANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDASDE 3531
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 104/279 (37%), Gaps = 70/279 (25%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------------------- 199
+E CG+ + CV + CDG C + DE
Sbjct: 2534 DEFECGNGD-CVNYTLTCDGMAHCKDKSDEKQSYCANRVCKKGYRRCVNARCVGHSSWCN 2592
Query: 200 ------------FCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------- 239
FCN C+ QF C G CI S KC+ VDC ED SDE N
Sbjct: 2593 GQDDCGDNSDELFCNTTLCSADQFQCKDGSCISNSSKCNQKVDC-EDASDEMNCTATDCS 2651
Query: 240 TCIHQCFNGQV--QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ H G +C + C +W CD DC D D + +C C
Sbjct: 2652 SYFHLGVKGVTFQKCEFTTLCYAPSWQCDGANDCG--DFSDERNCPGSGKTKCPTPFFAC 2709
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S +CIP +W CD+E DC + DE +H C + CG +++C+
Sbjct: 2710 P-SGRCIPMSWTCDKENDCE-----NGADE------AHCDKFCSAAQFECG-NHRCIPNR 2756
Query: 358 KFCDGKPDCSNGEDEGPFCNNKA-DCENLKC--SHKCSP 393
CDG DC + DE C K E +C SH+C P
Sbjct: 2757 WVCDGADDCGDSSDEDSKCKTKTCSPETFQCPESHRCIP 2795
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SV+++GS V
Sbjct: 4035 KIETAAMDGTMRETLVEENIQWPTGLAVDYFNERLYWADAKLSVICSVKLNGSDAIV 4091
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R+ LV +I WP+ + IDY +LYWCD+ + +E + ++ N
Sbjct: 2039 RIERSRLDGSERAILVNVSISWPNGISIDYEDGMLYWCDARTDKIERINLETGQN 2093
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 16/128 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 3106 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALAVDVRYGYL 3164
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ + GM G NRS +V I WP+ L +D+ D +YW D+ + + +D
Sbjct: 3165 YWSDWGDSPHIGRIGMDGTNRSVIVEDKITWPNGLTLDFINDRIYWADAREDYIAFASLD 3224
Query: 158 G-SHNAVL 164
G S + VL
Sbjct: 3225 GTSRHTVL 3232
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
C PNE +CG + C+ +SK C+G PDC++G DEGP C T
Sbjct: 87 CPPNEYQCGGTELCIHMSKLCNGVPDCTDGWDEGPHCREYTT 128
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T N WP+ L +DY + + W D+ + +
Sbjct: 1416 WDASLP-------RIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDARSDAI 1468
Query: 152 ESVRVDGS 159
S + DGS
Sbjct: 1469 YSAKYDGS 1476
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 14/99 (14%)
Query: 205 CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIH----QCFNGQVQCALSKKCI 259
C+P QF C G CI + W+CD DC + +EP+ C H +C + QC ++ CI
Sbjct: 42 CSPKQFVCKDGVTCISKGWRCDREKDCPDGSDEEPDVCPHSTVSRCPPNEYQCGGTELCI 101
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
+ LC+ DC+ + WD+ C C+
Sbjct: 102 HMSKLCNGVPDCT---------DGWDEGPHCREYTTNCS 131
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E M G NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 362 KVEGCDMDGHNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 419
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-----PEIFPL 104
L TH LA+++ RN ++ ++ RL + N ++ D P P + L
Sbjct: 1667 LPNTHGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVLHPVLGKL 1726
Query: 105 ----DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + A G NRS L T N + P L ID+ + LYW S +T+ ++DGS
Sbjct: 1727 YWTDGDNISMANTDGTNRSVLFT-NQKGPVGLSIDFKAERLYWISSGNSTINRCKLDGSG 1785
Query: 161 NAVL 164
VL
Sbjct: 1786 LEVL 1789
>gi|358410887|ref|XP_003581862.1| PREDICTED: low-density lipoprotein receptor-related protein 2 [Bos
taurus]
Length = 4641
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/300 (36%), Positives = 141/300 (47%), Gaps = 25/300 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C P + C ++C+AL+ CDG DC++G DE C CT QF+C G+CI ++++
Sbjct: 1146 CSPTQFHC-PDHRCIALTFVCDGTKDCADGSDE-IGCVINCTASQFTCVSNGQCISKTYR 1203
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP W CD DC + +
Sbjct: 1204 CDGVFDC-DDHSDETDCPTRPPGMCHQDEFQCQEDGICIPKTWECDGHEDC----LQGSD 1258
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C C + CI NWLCD + DC D +DE K C
Sbjct: 1259 EHNGCPPKTCHPSHFVCQ-NGNCIYRNWLCDGDNDCG-----DMSDE---KDCPTQPFQC 1309
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAM 399
+ +C + CV LS CDG DC G DE P CN N N C+H+C P GA
Sbjct: 1310 PSWQWQCPGHSICVNLSAVCDGVSDCPGGTDESPLCNQNSCSDSNGGCTHQCIQGPYGAQ 1369
Query: 400 CFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G N +KT C D DEC G C Q C N S+ C C YTL D ++C A
Sbjct: 1370 CQCPLGYLLGNDSKT-CEDIDECRTPGFCSQYCYNMRGSFRCWCDSEYTLDADRRTCKAT 1428
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 140/299 (46%), Gaps = 58/299 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
CH N+ C + C+ S CDG+ DC++G DE C C+ QF+C G+CIP ++
Sbjct: 102 CHSNQFLCPNEQLCIPESWVCDGEDDCNDGADERRHCPGITCSSRQFTCENGECIPGEFR 161
Query: 224 CDGFVDCLEDGSDEPN------------------------------------TCIHQCFN 247
CD DCL DG+DE N C H+C
Sbjct: 162 CDHSTDCL-DGTDEKNCRYPVCEQLTCADGACYNTSQRCNGQVDCRDASDERNCTHRCTR 220
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPH 306
+ QC S +CIP ++CD E+DC D +DE + C + C + CI
Sbjct: 221 TEFQCG-SGQCIPRTYVCDHEIDCE-----DGSDEHSCPAYRTCKGNEFTCP-NGVCIAQ 273
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+W+CD E DC VDN DED + + C+PNE C S +C+ +SK CDG DC
Sbjct: 274 SWVCDGESDC-----VDNADEDGCESKINRTFECYPNEWACPKSGKCIPISKVCDGTLDC 328
Query: 367 SNGEDEGPFCNNKA----DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT-QCVDADE 418
GEDE + C +L C ++C +P G MC+CP+G N N+T CV A E
Sbjct: 329 PGGEDESNITAGQQCDVNLCPSLGCEYQCHRSPGGGMCYCPSGFIVNQNRTNNCVGALE 387
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 110/345 (31%), Positives = 159/345 (46%), Gaps = 39/345 (11%)
Query: 157 DGSHNAVLCHPNELRCGS------SNQCVALSKFCDGKPDCSN--GEDEGPFC-NAECTP 207
DGS C ++ C S +N+C+ + CDG DC + EDE C N C+
Sbjct: 2881 DGSDEPPTCEFSQSTCASDYFKCDNNRCIPMMWVCDGDNDCGDMSDEDERHNCKNRNCSS 2940
Query: 208 GQFSCGMG-----KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+F+C +G CIP+SW CDG DCL+ + N CF + C + CIP++
Sbjct: 2941 SEFACEVGVRPHRGCIPKSWVCDGEADCLDALDEHQNCTRRSCFGTEFVCN-NGLCIPNH 2999
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ CD DC D +DE + C C + CI ++CD + DC
Sbjct: 3000 FRCDRNNDCG-----DYSDERGCVYPTCDETLFTCQ-NGLCINKAYVCDGDNDCK----- 3048
Query: 323 DNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DN+DE ++ H C P++ RC + N C+ + K C+ PDCS+ DE N+ +
Sbjct: 3049 DNSDEL--EHLCHTPETTCPPHQFRCDNGN-CIEMMKVCNNFPDCSDNSDEKGCGINECN 3105
Query: 382 CENLK-CSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYV 437
L C+ C+ T C C G +K CVD DEC C Q C N +Y+
Sbjct: 3106 DPTLSGCNQNCTDTLTSFYCSCNPGYKLLSDKRTCVDIDECEETPFVCSQKCENLPGTYI 3165
Query: 438 CSCTEGYTLRPDGKSCTA-VNVPQDEPASIIFSSTVDIRRIHLNG 481
C C GY PDGK+C N+ D +IFS+ +R + + G
Sbjct: 3166 CKCAPGYIREPDGKTCRQNSNIEPD----LIFSNRYYLRNLTVYG 3206
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 151/336 (44%), Gaps = 44/336 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC C+ CD DC + DE C PG F C G CI E KC
Sbjct: 3750 CTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDCEMMTCRPGYFQCDSGHCISEHMKC 3808
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH-----NWLCDEEMDCSTDDIVDN 279
+G DC D SDE N C + NG A +C H +W CD + DC D
Sbjct: 3809 NGVADC-RDASDEAN-CPTRFPNGAYCPATMFECKNHVCIHSSWKCDGDNDCG-----DG 3861
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ H C N + +C + +CI + +C++E DC D +DE +
Sbjct: 3862 SDEE---LHLCLNVACDSPYRFRCD-NNRCIYRHEVCNQEDDCG-----DGSDEKKELCV 3912
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD---CENLKCSHK 390
C P+E +C S+ +C+ + CD DC + DE CN D ENL C H
Sbjct: 3913 EPTPRPCTPDEFKC-SNGRCIPQHRVCDHVNDCGDNFDETG-CNTGKDRSCAENL-CEHN 3969
Query: 391 CSPTPRGA-MCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C+ G +C C G PN + C D +EC+ GSC Q C NT SY CSC EG+T
Sbjct: 3970 CTQLREGGFICSCRPGFKPNSIDRNLCEDINECMQFGSCPQICHNTKGSYECSCAEGFTS 4029
Query: 447 RPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D G+ C A P ++ V IR+ +L+
Sbjct: 4030 LSDRYGERCAA----DGSPPLLLLPENVRIRKYNLS 4061
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 147/350 (42%), Gaps = 62/350 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
CH ++C +S C+ S CDG DC + DE P FC C +F C G CIP W
Sbjct: 2812 CHTGYVKCTNSTICIPRSFLCDGDNDCGDMSDENPLFCATRSCGSDEFHCTSGPCIPARW 2871
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC C + +C + +CIP W+CD + DC D+ D
Sbjct: 2872 YCDHEKDC-SDGSDEPPTCEFSQSTCASDYFKCD-NNRCIPMMWVCDGDNDCG--DMSDE 2927
Query: 280 TDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDED------- 328
+ K C + + C + + CIP +W+CD E DC +D DE
Sbjct: 2928 DERHNCKNRNCSSSEFACEVGVRPHRGCIPKSWVCDGEADC-----LDALDEHQNCTRRS 2982
Query: 329 -WDKYFSHNAVLCHPNELRCGSSNQC--------------------------VALSKFCD 361
+ F N LC PN RC +N C + + CD
Sbjct: 2983 CFGTEFVCNNGLCIPNHFRCDRNNDCGDYSDERGCVYPTCDETLFTCQNGLCINKAYVCD 3042
Query: 362 GKPDCSNGEDEGP-FCNNKADC---ENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDA 416
G DC + DE C+ +C + C + F N ++ C
Sbjct: 3043 GDNDCKDNSDELEHLCHTPETTCPPHQFRCDNGNCIEMMKVCNNFPDCSDNSDEKGC-GI 3101
Query: 417 DEC---LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+EC + G C+Q CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3102 NECNDPTLSG-CNQNCTDTLTSFYCSCNPGYKLLSDKRTCVDIDECEETP 3150
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 106/218 (48%), Gaps = 21/218 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV S CD DC + DE C +F+C G+CIP CDG +CL++
Sbjct: 2740 ANGRCVPYSDRCDHYNDCGDNSDEAGCHFRACNRTEFTCSNGRCIPSELVCDGVDNCLDN 2799
Query: 234 -GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQC 290
SDE N C G V+C S CIP ++LCD + DC D +DE+ + C
Sbjct: 2800 SASDEKNCPERTCHTGYVKCTNSTICIPRSFLCDGDNDCG-----DMSDENPLFCATRSC 2854
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ + C S CIP W CD E DCS D +DE FS + C + +C +
Sbjct: 2855 GSDEFHCT-SGPCIPARWYCDHEKDCS-----DGSDEPPTCEFSQST--CASDYFKC-DN 2905
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
N+C+ + CDG DC + DE + + +C+N CS
Sbjct: 2906 NRCIPMMWVCDGDNDCGDMSDE----DERHNCKNRNCS 2939
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 95/203 (46%), Gaps = 26/203 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLED 233
+CV L CDG DC + DE NA C+P F C G CIP W+CDG DCL D
Sbjct: 1033 RCVPLQYRCDGFDDCLDNSDEVQCTTSNATCSPLAFECKREGHCIPSMWRCDGEDDCL-D 1091
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ- 289
GSDE P C Q C + CIP +W+CD + DC D +DE + Q
Sbjct: 1092 GSDEQNCPTRAPTSCRADQFTCD-NNFCIPRSWVCDTDNDCK-----DGSDEKSCNYTQT 1145
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C +CI ++CD DC+ D +DE + C ++ C S
Sbjct: 1146 CSPTQFHCP-DHRCIALTFVCDGTKDCA-----DGSDE------IGCVINCTASQFTCVS 1193
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ + CDG DC + DE
Sbjct: 1194 NGQCISKTYRCDGVFDCDDHSDE 1216
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 136/349 (38%), Gaps = 89/349 (25%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL----------------------- 141
+ ++E A M G +R LV + + WP+ L +DY Q+++
Sbjct: 2521 NAKIEMATMGGYSRRSLVDRGLVWPNGLTLDYEQNLIYWADANLEKIERMDLEHYLREVI 2580
Query: 142 -----------------YWCDSHLNTVESV-RVDGSHNAVLC-----HPNELRCGSSNQC 178
YW D + +VDGS + P +R +Q
Sbjct: 2581 VSRANSPFGLAIYGQYVYWTDLLTQKIYRANKVDGSGQTAVTVTLPFRPKGIRAVVKDQQ 2640
Query: 179 VALS---KFCDG-----KPDCSNGEDEGP------------FC----NAECTPGQFSCGM 214
LS +F G P + E + P +C C +F+C
Sbjct: 2641 QCLSPCDRFNGGCSHICAPGPNGAECQCPHEGRWYLANNNKYCIQDNGTRCDSSKFTCLS 2700
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKCIP+ +C+ DC D SDE T H C + CA + +C+P++ CD DC
Sbjct: 2701 GKCIPDQLQCNDIDDC-GDSSDELETLCAFHSCPSTSFTCA-NGRCVPYSDRCDHYNDCG 2758
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE F C + C+ + +CIP +CD D+ +DN+ D
Sbjct: 2759 -----DNSDEAGCHFRACNRTEFTCS-NGRCIPSELVCD-----GVDNCLDNSASDEKNC 2807
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
CH ++C +S C+ S CDG DC + DE P FC ++
Sbjct: 2808 PERT---CHTGYVKCTNSTICIPRSFLCDGDNDCGDMSDENPLFCATRS 2853
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C FSC G+C+P ++CDGF DCL D SDE T C +C CIP
Sbjct: 1021 QCGTLSFSCHNGRCVPLQYRCDGFDDCL-DNSDEVQCTTSNATCSPLAFECKREGHCIPS 1079
Query: 262 NWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD E DC +D +DE C Q C + CIP +W+CD + DC
Sbjct: 1080 MWRCDGEDDC-----LDGSDEQNCPTRAPTSCRADQFTCD-NNFCIPRSWVCDTDNDCK- 1132
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE Y C P + C ++C+AL+ CDG DC++G DE
Sbjct: 1133 ----DGSDEKSCNY----TQTCSPTQFHC-PDHRCIALTFVCDGTKDCADGSDE 1177
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 110/275 (40%), Gaps = 82/275 (29%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G +S +++ I WP+ L IDY D+LYW D+H
Sbjct: 3336 IGRVGMDGTLKSLIISTKIMWPNGLTIDYTNDLLYWADAHLGYIEFSDLEGRHRHTVYET 3395
Query: 148 ----------------------LNTVESV-RVDGSHNAVLC----HPNELR--------- 171
TVE + +GS L P ++R
Sbjct: 3396 GTLSHPFAITIFEDTIYWTDWNTKTVEKGNKYNGSDRVALLNVTHRPYDIRVYHPYRQPI 3455
Query: 172 ----CGSSN-QCVALSKFCDGK-------PDCSNGEDEGP--FCNAECTPGQFSCGMGK- 216
CG++N C L +G PD GP C C+ QF C +
Sbjct: 3456 VPNPCGTNNGGCSHLCLIKEGGVGFTCECPDNFYTVQRGPNTQCLPMCSSTQFLCADSEM 3515
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP WKCDG DCL DGSDEP TC + C G QC C + LC+ DC
Sbjct: 3516 CIPIWWKCDGRRDCL-DGSDEPITCPQRFCALGMFQCN-DGNCTNSHSLCNLRQDCP--- 3570
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
D +DED + HQC + QCA +K+CIP +W
Sbjct: 3571 --DGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESW 3602
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 100/229 (43%), Gaps = 43/229 (18%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C +F C G CI SW+CDG DC +G+DE + C + Q C + CIP +W+
Sbjct: 63 CRSNEFLCQPGLCITASWRCDGTRDC-PNGADEIDCPTSSCHSNQFLCPNEQLCIPESWV 121
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
CD E DC+ D DE + H C + Q C + +CIP + CD DC
Sbjct: 122 CDGEDDCN-----DGADE---RRHCPGITCSSRQFTCE-NGECIPGEFRCDHSTDC---- 168
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+D TDE +Y + C + C S+ C+G+ DC + DE
Sbjct: 169 -LDGTDEKNCRYPVCEQLTC--------ADGACYNTSQRCNGQVDCRDASDE-------- 211
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTC 429
C+H+C+ T C +GQ +T D + DGS + +C
Sbjct: 212 ----RNCTHRCTRTEFQ----CGSGQCIPRTYVCDHEIDCEDGSDEHSC 252
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 108/242 (44%), Gaps = 30/242 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C S C+ + CDG+ DC +G DE C C G F C G C
Sbjct: 3502 MCSSTQFLCADSEMCIPIWWKCDGRRDCLDGSDEPITCPQRFCALGMFQCNDGNCTNSHS 3561
Query: 223 KCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE P C HQC + QCA +K+CIP +W CD + DC + D++
Sbjct: 3562 LCNLRQDC-PDGSDEDPVLCEHHQCEPYEWQCA-NKRCIPESWQCDMQDDCDDNSDEDSS 3619
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C G +CA + CIP W CD + DC D +DE + +
Sbjct: 3620 HC---ASRTCRPGYFKCA-NGHCIPQIWKCDVDNDCG-----DYSDEPLQECLGPSYRCD 3670
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHKC 391
+ E C ++ +C+ C+G DC + DE DCE++ C +H+C
Sbjct: 3671 NYTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE-------QDCESMTCKPSGEFRCTNHRC 3723
Query: 392 SP 393
P
Sbjct: 3724 IP 3725
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/283 (31%), Positives = 118/283 (41%), Gaps = 55/283 (19%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCI---HQCFN-GQVQCALSKKCI 259
C PG F C G CIP+ WKCD DC D SDEP C+ ++C N + C + +CI
Sbjct: 3626 CRPGYFKCANGHCIPQIWKCDVDNDC-GDYSDEPLQECLGPSYRCDNYTEFSCKTNYRCI 3684
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
P +C+ DD DN+DE D + +G+ +C + +CIP W CD + DC
Sbjct: 3685 PKWAVCN-----GVDDCRDNSDEQDCESMTCKPSGEFRCT-NHRCIPLRWRCDGQNDCG- 3737
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------ 372
D +DE+ + C +E RC C+ CD DC + DE
Sbjct: 3738 ----DRSDEE-----NCAPRKCTESEFRC-DDQSCIPSRWVCDQTNDCGDNSDERDCEMM 3787
Query: 373 ----GPF-------------CNNKADCENLKCSHKCSPT--PRGAMCFCPAGQNPNKTQ- 412
G F CN ADC + C PT P GA +CPA K
Sbjct: 3788 TCRPGYFQCDSGHCISEHMKCNGVADCRDASDEANC-PTRFPNGA--YCPATMFECKNHV 3844
Query: 413 CVDAD-ECLIDGSC-DQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
C+ + +C D C D + HL +C Y R D C
Sbjct: 3845 CIHSSWKCDGDNDCGDGSDEELHLCLNVACDSPYRFRCDNNRC 3887
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 111/231 (48%), Gaps = 32/231 (13%)
Query: 156 VDGSHNAV-----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG 208
+DGS + C +C N C C+ + DC +G DE P + +C P
Sbjct: 3530 LDGSDEPITCPQRFCALGMFQCNDGN-CTNSHSLCNLRQDCPDGSDEDPVLCEHHQCEPY 3588
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
++ C +CIPESW+CD DC ++ ++ + C + C G +CA + CIP W CD
Sbjct: 3589 EWQCANKRCIPESWQCDMQDDCDDNSDEDSSHCASRTCRPGYFKCA-NGHCIPQIWKCDV 3647
Query: 268 EMDCSTDDIVDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE + ++C N + C + +CIP +C+ DD
Sbjct: 3648 DNDCG-----DYSDEPLQECLGPSYRCDNYTEFSCKTNYRCIPKWAVCN-----GVDDCR 3697
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE ++ C P+ E RC ++++C+ L CDG+ DC + DE
Sbjct: 3698 DNSDEQ-----DCESMTCKPSGEFRC-TNHRCIPLRWRCDGQNDCGDRSDE 3742
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 65/140 (46%), Gaps = 10/140 (7%)
Query: 136 YNQDILYWCDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
Y D ++ CD H + + R G +CH +E +C C+ + CDG DC G
Sbjct: 1202 YRCDGVFDCDDHSDETDCPTRPPG-----MCHQDEFQCQEDGICIPKTWECDGHEDCLQG 1256
Query: 195 EDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQ 251
DE C + C P F C G CI +W CDG DC D SDE + T QC + Q Q
Sbjct: 1257 SDEHNGCPPKTCHPSHFVCQNGNCIYRNWLCDGDNDC-GDMSDEKDCPTQPFQCPSWQWQ 1315
Query: 252 CALSKKCIPHNWLCDEEMDC 271
C C+ + +CD DC
Sbjct: 1316 CPGHSICVNLSAVCDGVSDC 1335
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M G+ R LV +++ WP+ L IDY N D +YW D N VE+++ DG+ ++
Sbjct: 4200 KIESAWMDGQRRKVLVQEDLGWPTGLCIDYMNGDRIYWSDLKDNIVETIKYDGTDRRIV 4258
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V + I WP+ L +DY +LY+ D +L+ ++ DGS+
Sbjct: 1574 RIERASMDGSQRTIIVQEKIYWPNGLALDYPNRLLYFMDGYLDYLDFCHYDGSNRRQVIA 1633
Query: 161 -NAVLCHPNEL 170
+ +L HP +
Sbjct: 1634 SDLILRHPYSI 1644
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A +G ++ ++ + S+ +D+ LYW D L T++ ++DGSH VL
Sbjct: 1485 KIWSAFQNGTDKKLILDSGVSMTGSIAVDWIGRNLYWTDISLRTIDVAKLDGSHKTVLIS 1544
Query: 167 PNELRCGS 174
N G
Sbjct: 1545 ENITNLGG 1552
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 53/140 (37%), Gaps = 25/140 (17%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVES--VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD 186
P S V D D L D H N + N LC PN RC +N
Sbjct: 2957 PKSWVCDGEADCLDALDEHQNCTRRSCFGTEFVCNNGLCIPNHFRCDRNN---------- 3006
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
DC + DE C F+C G CI +++ CDG DC +D SDE H C
Sbjct: 3007 ---DCGDYSDERGCVYPTCDETLFTCQNGLCINKAYVCDGDNDC-KDNSDELE---HLCH 3059
Query: 247 NGQVQCALSKKCIPHNWLCD 266
+ C PH + CD
Sbjct: 3060 TPETTCP------PHQFRCD 3073
>gi|351714517|gb|EHB17436.1| Very low-density lipoprotein receptor [Heterocephalus glaber]
Length = 988
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 289 CRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 348
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 349 CNGQDDC-NDGSDELDCAPPTCSAHEFQCSTSS-CIPLSWVCDDDADCSDQSDESLEQCG 406
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 407 RQPVMHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 455
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 456 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNANQCLGPGKFKCRSGECIDMIKVC 514
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 515 NQEQDCRDWSDEPLKECHVNECLINNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 574
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 575 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 630
Query: 478 HL 479
L
Sbjct: 631 GL 632
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 158/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 202 GGWRKAKCDPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 260
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 261 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSG 319
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 320 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPTCSAHEFQCSTS 379
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 380 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVMHTKCPASEIQCG-SGECIHKKW 432
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 433 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNAN 492
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECLI +G C C + +
Sbjct: 493 QCLGPGKFKCRSGECIDMIKVCNQEQDCRDWSDEPLKECHVNECLINNGGCSHICKDLVI 552
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 553 GYECDCAAGFEL-IDRKTCGDID 574
>gi|332831719|ref|XP_520460.3| PREDICTED: very low-density lipoprotein receptor isoform 4 [Pan
troglodytes]
gi|410213732|gb|JAA04085.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410254754|gb|JAA15344.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410297354|gb|JAA27277.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410335619|gb|JAA36756.1| very low density lipoprotein receptor [Pan troglodytes]
Length = 873
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHIKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|260820014|ref|XP_002605330.1| hypothetical protein BRAFLDRAFT_120630 [Branchiostoma floridae]
gi|229290663|gb|EEN61340.1| hypothetical protein BRAFLDRAFT_120630 [Branchiostoma floridae]
Length = 4206
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 153/327 (46%), Gaps = 27/327 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C + +C ++ +C+ S CD DC + DE P C+ CT QF+C +CIP +WK
Sbjct: 2577 FCGSSYFQC-ANGRCIPESWKCDNDNDCGDNSDEPPSCSFSCTKEQFTCNNSRCIPLNWK 2635
Query: 224 CDGFVDCLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC EDGSDE + + C Q +C + +CIP +W CD + DC D D
Sbjct: 2636 CDGEKDC-EDGSDESSNLMCDRITCPPEQFRCVENARCIPKHWTCDGDNDCP--DASDEM 2692
Query: 281 DEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
F + C + + QC +++CI W+CD + DC D +DE Y +
Sbjct: 2693 ASANCTFTETCDSDEFQCQ-NRRCIQAAWVCDHDNDCG-----DGSDEKECTYTT----- 2741
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-----CNNKADCENLKCSHKCSPT 394
C P++ +C + +C+ S CD DC++ DE P N D E C+ C
Sbjct: 2742 CAPDQFQC-KNGRCIPSSWTCDRDNDCNDNSDEAPSNPKCGRNECLDAEFNNCTQVCKDL 2800
Query: 395 PRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
P G C C G N C D DEC + C Q C NT+ SY C C EGY P
Sbjct: 2801 PIGFRCRCHKGYRMNGYVCEDIDECNTEFPCSQYCVNTYGSYRCRCAEGYNRDPAQPG-- 2858
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNG 481
D ++FS+ IR++ +G
Sbjct: 2859 VCKAASDVKPYVMFSNRYYIRKVDFSG 2885
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/330 (35%), Positives = 155/330 (46%), Gaps = 35/330 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C N+C+ CDG DC NGEDE C+A C QF C G CIP+ W C
Sbjct: 3418 CSESEFQC-EDNRCIPGRWKCDGDHDCENGEDERG-CSATCQTNQFQCSNGHCIPKGWHC 3475
Query: 225 DGFVDCLEDGSDEPNTCIHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
D DCL DGSDE N I C + QC + C P +W CD E DC D
Sbjct: 3476 DRDRDCL-DGSDEENCEITAPPGVLCNEAEFQCN-NTLCKPLSWKCDGEDDCG-----DK 3528
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ + C N Q +C ++ C+P + CD C DN+DE D
Sbjct: 3529 SDEE---AYMCQNFVCPPTRQFRCRNNRVCLPISRRCDGFSHCD-----DNSDE-MDCRA 3579
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKADCENLKCSHK 390
+C + +C S+N+C+ L C+ +C +G DEG P N+ N C HK
Sbjct: 3580 PAEDRICTAEDFKCLSTNRCIKLDLVCNNYDNCGDGSDEGLCGPPNVNECATNNGNCQHK 3639
Query: 391 CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ PRG C C G + T C D DEC G C Q CTNT SY CSC+ G+
Sbjct: 3640 CTDLPRGHYCTCRDGYALGADLTTCEDIDECADFGRCSQICTNTKGSYHCSCSAGFMKAQ 3699
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
G + Q +P ++ + I+RI+
Sbjct: 3700 RGNGVETC-IAQGDPDYLLIADDNAIKRIN 3728
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/262 (35%), Positives = 126/262 (48%), Gaps = 38/262 (14%)
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
EP TC Q QC +K+CIP W+CD++ DC+ D D++DE C GQ
Sbjct: 30 EPGTC----RTNQFQCE-NKRCIPAGWVCDDDYDCNNGD-GDHSDETDCPDKTCGPGQFA 83
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS------- 349
C CI W CD E DC+ D +DE + C N RC
Sbjct: 84 CLDGLTCITKGWRCDGEEDCT-----DGSDESPEICPELQNYTCPANHYRCIQQCPEGGR 138
Query: 350 -SNQCVALSKFCDGKPDCSNGEDEGPFC--------NNKADCENLKCSHKCSPTPRGAMC 400
++ CV CD KPDC +G+DEGP C N + DCE C+ + G +C
Sbjct: 139 CTDTCVHFDVLCDNKPDCPSGDDEGPHCTSLPRLCANGRGDCE-----EACTVSREGRVC 193
Query: 401 FCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
FC G +P++T C D +EC + G CDQ C NT SY CSC GYTL+ D K+C A N
Sbjct: 194 FCRNGYVVSPDRT-CKDLNECKLPGYCDQHCENTVGSYTCSCAPGYTLQSDKKTCKAQN- 251
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
A ++ ++ + ++LN
Sbjct: 252 --SNSAVLVVANRQKLDMLNLN 271
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 117/407 (28%), Positives = 157/407 (38%), Gaps = 116/407 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN+ RC SS +C+ CDG DC GEDE C PGQF C +CIPE W
Sbjct: 876 CQPNQFRCNSS-RCIPDRWVCDGDKDCGETGEDEIGCNERTCGPGQFHCNSSRCIPEMWV 934
Query: 224 CDGFVDCLEDGSDEPNTCIH--------QCFNG--------------------------- 248
CD DC DGSDEP +C H QC NG
Sbjct: 935 CDRDNDC-GDGSDEPTSCEHPSCDPTQFQCDNGRCISPSWRCDTDNDCTDNSDEKDCTYS 993
Query: 249 -----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
Q +C + +CI W+CD + DC ++ + C + QC S +C
Sbjct: 994 CNNETQHKCLDTGRCISKRWVCDGDYDCQDHSDEPDSCASTNSPASCDEDEFQCH-SGQC 1052
Query: 304 IPHNWLCDE---------EMDCSTDDIVDNTDE----------DWDKYFS-HNAVLCHPN 343
I W CD+ E +C+ D +D +DE D ++ F+ + C
Sbjct: 1053 ILARWRCDKDEDCMDKSDEFNCTGKDCMDKSDEFNCTGSERPCDPEQEFTCKKSGECISL 1112
Query: 344 ELRC--------GSSNQ-------------------CVALSKFCDGKPDCSNGEDEGPFC 376
+ RC GS Q C+ KFC+ K DC +G DEG C
Sbjct: 1113 DWRCDQEEDCEDGSDEQDCKSTCDPPNRTCANDTSICLTPEKFCNKKRDCPDGSDEGKLC 1172
Query: 377 NN-KADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
+ D +N CSH C P P G +C CP + C + C G C Q CT
Sbjct: 1173 DILDCDIKNGGCSHICQPWPMGVVCLCPDDLRLGADNKTCEEVKWCEQLGICSQICT--- 1229
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P GKS P ++FS+ ++RR+ L+
Sbjct: 1230 --------------PVGKSYRYPATPY-----VVFSNRHELRRVDLS 1257
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/212 (37%), Positives = 103/212 (48%), Gaps = 22/212 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C PN+ +C N+C+ C+G +C +G DE C QF C K CIP W
Sbjct: 3256 CLPNQFKCKGENKCIPGIFRCNGATNCQDGSDEENCPERTCAANQFKCNSSKICIPRVWM 3315
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DGSDEPN C + C +++C + +CIP W CD + DC DN+DE
Sbjct: 3316 CDGDNDC-GDGSDEPNNCTARSCSENELRCNNTGRCIPARWQCDGDNDCG-----DNSDE 3369
Query: 283 DWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C Q +C + KCIP W CD + DC DN+DED C
Sbjct: 3370 QVGVCSARTCDQYQHRCN-NNKCIPARWRCDYDDDCG-----DNSDED-----GCTPRPC 3418
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E +C N+C+ CDG DC NGEDE
Sbjct: 3419 SESEFQC-EDNRCIPGRWKCDGDHDCENGEDE 3449
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 148/366 (40%), Gaps = 100/366 (27%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS---- 159
++E+A M G NR LV + I WP+ L +D+ + LYW D+ + + V +
Sbjct: 666 KIEQAWMDGTNRKDLVNREKTTILWPNGLALDHTSNKLYWADAFYDKIMMVDLTKGDVKV 725
Query: 160 --HNAVLCHPN-----------------------------------------ELRCGSSN 176
VL HP E+R SSN
Sbjct: 726 VYKGDVLIHPFGLALHENHIFWTEFRTGEIKMLDLNNNNSISHIKSDQAPLFEIRVYSSN 785
Query: 177 QCVALSKFC-----------------DGKP---DCSNGEDEGPFCNA-ECTPGQFSCGMG 215
C C DG+ D N ED + ++ +C+ +F+C G
Sbjct: 786 ACATNDNVCPSLCLITPGNRAVCSCPDGQEVMQDGKNCEDIANYTSSPQCSSTEFACASG 845
Query: 216 KCIPESWKCDGFVDCLEDGSDE-PNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+CIPE WKCDG DC DGSDE P+ C H C Q +C S +CIP W+CD + DC
Sbjct: 846 QCIPERWKCDGDRDC-HDGSDELPSACTGHTCQPNQFRCN-SSRCIPDRWVCDGDKDCGE 903
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DE C GQ C S +CIP W+CD + DC D +DE
Sbjct: 904 ----TGEDEIGCNERTCGPGQFHCN-SSRCIPEMWVCDRDNDCG-----DGSDEP----T 949
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---FCNNKADCENLKCSHK 390
S C P + +C + +C++ S CD DC++ DE CNN+ HK
Sbjct: 950 SCEHPSCDPTQFQC-DNGRCISPSWRCDTDNDCTDNSDEKDCTYSCNNET-------QHK 1001
Query: 391 CSPTPR 396
C T R
Sbjct: 1002 CLDTGR 1007
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 150/354 (42%), Gaps = 53/354 (14%)
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPS 130
Q ++S R + N L + D IF D R ++ A G N ++++ P
Sbjct: 3020 QVIINSTRTKIGWPNGL--TIDYVTKRIFWGDAREDHIQFAEADGSNIQTVISE-TGIPH 3076
Query: 131 SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------------LCHPNELRCGSSNQ 177
+ +D ++W D V NA + HP R ++
Sbjct: 3077 IFGLSLFEDYIFWTDWETKGVHKAHKYTGANATQLVTSVHRPMDIHVYHPYRQRSVPNHP 3136
Query: 178 CVALSKFC--------DGKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C GK C+ E+ +G C + CT QF CG KCIP WKC
Sbjct: 3137 CSVNNGGCHNLCLLQPGGKRTCACAENFYLASDGKTCLSNCTSSQFECGNFKCIPFWWKC 3196
Query: 225 DGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DG DC +D SDEP +C C GQ QC + +C ++CD + DC+ D +DE
Sbjct: 3197 DGENDC-DDASDEPASCPPFNCRPGQFQCN-NTECTNPAFICDGDQDCT-----DGSDEK 3249
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ H C Q +C KCIP + C+ +C D +DE+ + C N
Sbjct: 3250 NCEHHTCLPNQFKCKGENKCIPGIFRCNGATNCQ-----DGSDEE-----NCPERTCAAN 3299
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCSH--KCSPT 394
+ +C SS C+ CDG DC +G DE C ++ EN L+C++ +C P
Sbjct: 3300 QFKCNSSKICIPRVWMCDGDNDCGDGSDEPNNCTARSCSENELRCNNTGRCIPA 3353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 105/225 (46%), Gaps = 24/225 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPESW 222
C E C +S QC+ CDG DC +G DE P C P QF C +CIP+ W
Sbjct: 835 CSSTEFAC-ASGQCIPERWKCDGDRDCHDGSDELPSACTGHTCQPNQFRCNSSRCIPDRW 893
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC E G DE C GQ C S +CIP W+CD + DC D +DE
Sbjct: 894 VCDGDKDCGETGEDEIGCNERTCGPGQFHCN-SSRCIPEMWVCDRDNDCG-----DGSDE 947
Query: 283 DWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
H C Q QC + +CI +W CD + DC+ DN+DE Y +N
Sbjct: 948 PTSCEHPSCDPTQFQCD-NGRCISPSWRCDTDNDCT-----DNSDEKDCTYSCNNET--- 998
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NNKADCE 383
+ +C + +C++ CDG DC + DE C N+ A C+
Sbjct: 999 --QHKCLDTGRCISKRWVCDGDYDCQDHSDEPDSCASTNSPASCD 1041
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 110/219 (50%), Gaps = 33/219 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C RC + +C++ K+CDGK DC + DE C PG+F C G+CI ES +C
Sbjct: 2452 CRDGWKRC-RNGRCISEQKWCDGKNDCHDNSDEDRCDERSCAPGEFRCNNGRCIDESLRC 2510
Query: 225 DGFVDCLEDGSDE----PNTC-------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
D + C +D SDE P C + + +G + C + CI W CD E DC
Sbjct: 2511 DQRIFC-DDASDEIGCPPVDCSTYRERGLEEVLSGYINCNKTSLCILPQWRCDGENDCG- 2568
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DE+ D F C + QCA + +CIP +W CD + DC DN+DE F
Sbjct: 2569 ----DNSDEE-DCF--CGSSYFQCA-NGRCIPESWKCDNDNDCG-----DNSDEPPSCSF 2615
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C + C +S +C+ L+ CDG+ DC +G DE
Sbjct: 2616 S-----CTKEQFTCNNS-RCIPLNWKCDGEKDCEDGSDE 2648
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 108/228 (47%), Gaps = 22/228 (9%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIP 219
A C NELRC ++ +C+ CDG DC + DE C+A C Q C KCIP
Sbjct: 3334 ARSCSENELRCNNTGRCIPARWQCDGDNDCGDNSDEQVGVCSARTCDQYQHRCNNNKCIP 3393
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC D SDE C + QC +CIP W CD + DC +N
Sbjct: 3394 ARWRCDYDDDC-GDNSDEDGCTPRPCSESEFQCE-DNRCIPGRWKCDGDHDC------EN 3445
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+++ C Q QC+ + CIP W CD + DC +D +DE+ + + VL
Sbjct: 3446 GEDERGCSATCQTNQFQCS-NGHCIPKGWHCDRDRDC-----LDGSDEENCEITAPPGVL 3499
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C+ E +C ++ C LS CDG+ DC + DE + C+N C
Sbjct: 3500 CNEAEFQCNNT-LCKPLSWKCDGEDDCGDKSDEEAYM-----CQNFVC 3541
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECTPGQFSCGMGKCI 218
+ C P + RC + +C+ CDG DC + DE N C +F C +CI
Sbjct: 2657 ITCPPEQFRCVENARCIPKHWTCDGDNDCPDASDEMASANCTFTETCDSDEFQCQNRRCI 2716
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+W CD DC DGSDE C Q QC + +CIP +W CD + DC+ D
Sbjct: 2717 QAAWVCDHDNDC-GDGSDEKECTYTTCAPDQFQCK-NGRCIPSSWTCDRDNDCN-----D 2769
Query: 279 NTDE 282
N+DE
Sbjct: 2770 NSDE 2773
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 124/317 (39%), Gaps = 47/317 (14%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E+ G NR +V ++ S + D +YW D +V + ++DGS+ VL
Sbjct: 2286 DKIERCNYDGSNR--VVILQVEPVHSFGLAVYGDYIYWTDWVRRSVMAANKLDGSNVKVL 2343
Query: 165 ------------CHPNELRCGSSNQCVALSKFCDGK---------------PDCSNGEDE 197
NE + C L+ CD + P
Sbjct: 2344 RSDISQQPMGIIAVANETNNCMLSPCRTLNGGCDHECSVLPTGLVNCTCRPPKVLMDATR 2403
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFNGQVQCALS 255
C+P QF C C+P CDG DC ED +DE P +C +G +C +
Sbjct: 2404 CVVPEVTCSPSQFECSASGCVPYEDSCDGVPDC-EDRTDEAKPYCATRECRDGWKRCR-N 2461
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+CI CD + DC DN+DED C G+ +C + +CI + CD+ +
Sbjct: 2462 GRCISEQKWCDGKNDCH-----DNSDEDRCDERSCAPGEFRCN-NGRCIDESLRCDQRIF 2515
Query: 316 CSTDDIVDNTD---EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS-NGED 371
C DD D D Y + C ++ C+ CDG+ DC N ++
Sbjct: 2516 C--DDASDEIGCPPVDCSTYRERGLEEVLSGYINCNKTSLCILPQWRCDGENDCGDNSDE 2573
Query: 372 EGPFCNNKA-DCENLKC 387
E FC + C N +C
Sbjct: 2574 EDCFCGSSYFQCANGRC 2590
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ L ++E+A + G R LV +++QWP+ L IDY LYW D+ NT+ES+ DG+
Sbjct: 3859 WGLSPKIERARLDGLERRVLVREDLQWPTGLAIDYQNRRLYWADAKKNTIESIDFDGNGR 3918
Query: 162 AV 163
V
Sbjct: 3919 VV 3920
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+EKA M G NRS +VT I P + +D +YW D++LN +ESV +G + + H
Sbjct: 338 RIEKAHMDGTNRSQIVTSKIVLPHGIALDIVTQTVYWVDAYLNYIESVDYNGYNRRTIAH 397
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 37 VDNTDEDW-DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD 95
V N ++ W D + LA+++ +N QQ ++ V ++ S D
Sbjct: 1831 VSNRNQTWQDTIITTDMGRVEGLAVDWVAKNIYWT-DQQFDLIEVARWNGSFRRVIVSTD 1889
Query: 96 LPAPE---IFPL-----------DERLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDI 140
L P + P+ +++E+A M G R L +QWP+ + +DY ++
Sbjct: 1890 LDKPRDIVVHPMLGYIFWSDWGTQQKIERAAMDGSQRIVLYNGTGLQWPNGMAVDYQTNM 1949
Query: 141 LYWCDSHLNTVESVRVDG-SHNAVLCHPNE 169
+YW D++ N +E + +DG +H +L N+
Sbjct: 1950 VYWVDANSNRIERIGIDGNNHRYILTTENQ 1979
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 60/132 (45%), Gaps = 26/132 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGE----DEGPFCNAECTPGQFSCGMG-KCIP 219
C N+ +C + +C+ CD DC+NG+ DE + C PGQF+C G CI
Sbjct: 34 CRTNQFQC-ENKRCIPAGWVCDDDYDCNNGDGDHSDETDCPDKTCGPGQFACLDGLTCIT 92
Query: 220 ESWKCDGFVDCLEDGSDEP----------------NTCIHQCFNGQVQCALSKKCIPHNW 263
+ W+CDG DC DGSDE CI QC G + C+ +
Sbjct: 93 KGWRCDGEEDCT-DGSDESPEICPELQNYTCPANHYRCIQQCPEGG---RCTDTCVHFDV 148
Query: 264 LCDEEMDCSTDD 275
LCD + DC + D
Sbjct: 149 LCDNKPDCPSGD 160
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 18/125 (14%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L LA+++ +N + RL L + ++ +P LD
Sbjct: 1317 LATAEGLAVDWVGKNMYWVESNLDQIEVARLN-GMYRTTLIAEEMESPRAIALDPRVGYL 1375
Query: 106 ---------ERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
R+E+ M G NRS + V + WP+ L +DY ++W D+ +++ S
Sbjct: 1376 FWTDWQSNRARIERCDMSGTNRSVIHWVANDGGWPNGLTVDYLDSRIFWVDAKSDSITSA 1435
Query: 155 RVDGS 159
+G
Sbjct: 1436 DYEGG 1440
>gi|332249529|ref|XP_003273910.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Nomascus leucogenys]
Length = 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 119/362 (32%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPNEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCR-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDINKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPNEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCRDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDINKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLESLEF 643
>gi|341901778|gb|EGT57713.1| CBN-LRP-1 protein [Caenorhabditis brenneri]
Length = 4759
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 145/299 (48%), Gaps = 20/299 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ C ++ +C+ + CDG DC +G DE +C+ QF C G+ C+P
Sbjct: 1189 CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSALQFRCASGRQCVPLR 1247
Query: 222 WKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + + C + Q +C S CIP +W CD + DC DD D
Sbjct: 1248 NHCDGQNDC-EDGSDEDSCAVSSESCTSDQFKCVSSGLCIPASWKCDGQQDC--DDGSDE 1304
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNA 337
QC + Q +C + +CI +NWLCD E DC D +DE ++ NA
Sbjct: 1305 PKFGCSSGRQCKSDQFKCG-NGRCILNNWLCDGENDCG-----DGSDESAERGCKTPMNA 1358
Query: 338 VLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + C + C+ L + CDGK C G DEG C + CS KC +P
Sbjct: 1359 RKCPFEHVACENDPDTCIPLHQLCDGKRHCPGGSDEGGRCARDLCSADRAGCSFKCHNSP 1418
Query: 396 RGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G +C CP G Q NKT+C +ECL SC Q C + + C C GY L D ++C
Sbjct: 1419 NGPICSCPFGEQLVNKTKCEPENECLDASSCSQRCKDEKHGFTCFCDTGYELDADKRTC 1477
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/363 (30%), Positives = 154/363 (42%), Gaps = 78/363 (21%)
Query: 145 DSHLNTVESVRVDGSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---- 198
DS + + S + S N +C+ N+ RC + +C+ CDG DCS+GEDE
Sbjct: 33 DSPPSVLRSRIISASVNTASSVCNENDFRC-NDGKCIRAEWKCDGSGDCSDGEDEKDCPH 91
Query: 199 PFCNAE-------------------------------------------CTPGQFSCGMG 215
P C ++ +P F C G
Sbjct: 92 PGCKSDQWQCDTYTWHSVSCIAEYQRCDNITDCADGSDEKDCPASTVDCSSPNVFMCADG 151
Query: 216 K-CIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ C + KCDG DC D SDE ++C CF Q +CA +CI +W+CD DC
Sbjct: 152 RQCFDMTKKCDGKYDC-RDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDC 210
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+ D +DE +F +C + QC +K+C P + CD DC DN+DE+
Sbjct: 211 A-----DGSDEPETCEFKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDEE-- 257
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
C P + C + C+ K CDG DC++G DE N C +L C
Sbjct: 258 ---ECGEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNL--CPSLGCQAG 312
Query: 391 CSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCT-EGYTL 446
C P+P G C CP+G + C D +EC G CDQ C N + CSC + +TL
Sbjct: 313 CHPSPHGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTL 372
Query: 447 RPD 449
+ D
Sbjct: 373 QMD 375
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 153/343 (44%), Gaps = 44/343 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE C PG C G CI E C
Sbjct: 3881 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCMPGHRQCDDGTCIAEHKWC 3939
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +CA S CIP ++CD + DC DN+D
Sbjct: 3940 DRKKDC-PNAADELHCEDVSRRTCSPFEFECANSV-CIPRKFMCDGDNDCG-----DNSD 3992
Query: 282 EDWDKFHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E +C + Q +CA S+ C+ LC+ DC D +DE S
Sbjct: 3993 E---TSTECRSAQCDPPLRFRCAHSRLCLNILQLCNGVNDCGQ---FDQSDEHLSMCSSF 4046
Query: 336 NAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN--KADCE----NLKCS 388
+ C ++ +C ++ CV + CD K DC + DE + KA CE N C
Sbjct: 4047 SEYGDCASDQFKC-ANGHCVNATMACDRKDDCGDQSDEVGCSKHGVKATCESAGSNGGCK 4105
Query: 389 HKCSPTPRGAM-CFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
H CS G C C G P N +C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 4106 HTCSDVVGGGYYCHCRDGFRPDPQNPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDY 4165
Query: 445 -----TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+GS
Sbjct: 4166 ENNVVVGSMTGKDCRA----KGDAANVMIGADSSLVQLSLHGS 4204
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 115/233 (49%), Gaps = 31/233 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC----NAECTPGQFSCGMGKCIP 219
C N ++C ++ +C+ CDG DC + DE +C C +F C +CIP
Sbjct: 1103 CAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIP 1162
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTD 274
E WKCD DC DGSDE I C N Q CA + +CIP WLCD + DC
Sbjct: 1163 EQWKCDSDNDC-GDGSDEK---IELCGNSTCAANQFSCA-NGRCIPIYWLCDGDNDC--- 1214
Query: 275 DIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D TDED ++ QC Q +CA ++C+P CD + DC D +DED
Sbjct: 1215 --YDGTDEDKERCPPVQCSALQFRCASGRQCVPLRNHCDGQNDCE-----DGSDEDSCAV 1267
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNNKADCEN 384
S + C ++ +C SS C+ S CDG+ DC +G DE F C++ C++
Sbjct: 1268 SSES---CTSDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKFGCSSGRQCKS 1317
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/333 (30%), Positives = 149/333 (44%), Gaps = 46/333 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCIPESWKCD 225
+C++ + CDG+ DC +G DE N CT +F C +CIP +W CD
Sbjct: 3020 KCISRAFICDGEDDCGDGSDEHTRHGCGNRTCTDQEFHCASNAKLAQPKYECIPRAWLCD 3079
Query: 226 GFVDCL--EDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
G V C ED S E T +C G+ +C ++ CI W CD + DC +D +DE
Sbjct: 3080 GDVTCAGGEDESTELCKTEKKECNKGEFRCT-NQHCIHATWECDGDNDC-----LDGSDE 3133
Query: 283 DWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ + C QCA + KC+P+ W CD DC D +DE K N+
Sbjct: 3134 HTNCTYSSCQPDFWQCA-NHKCVPNAWRCDGNDDCE-----DGSDE---KECPKNSAAGQ 3184
Query: 342 PNELRCG------SSNQCVALSKFCDGKPDCSNGEDEGPFC--NNKADCENLKCSHKCSP 393
+CG +S +C+ +K CD DC++ DE C + + E C KC
Sbjct: 3185 KAGSKCGKNQYQCTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCID 3244
Query: 394 TPRGAMCFCPAGQN---PNKTQCVDADECL--IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
G C C G ++ C + +EC I G C Q C + SY C+C +GY L
Sbjct: 3245 QKIGYKCDCFEGYAIDVSDQKSCHNVNECFEGISG-CSQKCDDKIGSYKCACVDGYLLSS 3303
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
D SC V Q+ + ++ IR+I ++G
Sbjct: 3304 DDHSCK--RVEQEPEPFFLLANKHYIRKISMDG 3334
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 148/369 (40%), Gaps = 94/369 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C ++RC ++N C+ + CDG DC + DE FC N +C C G+CIPE+W
Sbjct: 2921 CRGVKIRCPNTNICIQPADLCDGYDDCGDKADENQLFCMNQQCAQHYVRCPSGRCIPETW 2980
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQV-------QCALSKKCIPHNWLCDEEMDCSTDD 275
+CDG DC DG DE +T ++ QC + KCI ++CD E DC
Sbjct: 2981 QCDGDNDC-SDGWDETHTNCTDTSGKKICVGDYLFQCD-NLKCISRAFICDGEDDCG--- 3035
Query: 276 IVDNTDEDWDKF---HQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDIVDNT 325
D +DE C + + CA + K CIP WLCD ++ C+
Sbjct: 3036 --DGSDEHTRHGCGNRTCTDQEFHCASNAKLAQPKYECIPRAWLCDGDVTCA------GG 3087
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----- 380
+++ + C+ E RC ++ C+ + CDG DC +G DE C +
Sbjct: 3088 EDESTELCKTEKKECNKGEFRC-TNQHCIHATWECDGDNDCLDGSDEHTNCTYSSCQPDF 3146
Query: 381 -DCENLKCSHKCSPT-------------------PRGAMCFCPAGQNPNKTQ-------C 413
C N HKC P P+ + AG K Q C
Sbjct: 3147 WQCAN----HKCVPNAWRCDGNDDCEDGSDEKECPKNSAAGQKAGSKCGKNQYQCTSGEC 3202
Query: 414 VD--------------ADE---CLID-------GSCDQTCTNTHLSYVCSCTEGYTL-RP 448
+D +DE C ID C+Q C + + Y C C EGY +
Sbjct: 3203 IDDAKVCDRNFDCTDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYKCDCFEGYAIDVS 3262
Query: 449 DGKSCTAVN 457
D KSC VN
Sbjct: 3263 DQKSCHNVN 3271
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 91/213 (42%), Gaps = 61/213 (28%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE----PNTCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 1062 QFQCKNGRCIPKEWKCDGENDCL-DESDEVDEKGDKCFHETECAENTIKCRNTKKCIPAQ 1120
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK-------CIPHNWLCDEEMD 315
+ CD + DC D +DED C +GQ +KK CIP W CD + D
Sbjct: 1121 YGCDGDNDCG-----DYSDED---VKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDND 1172
Query: 316 C------------------------------------STDDIVDNTDEDWDKYFSHNAVL 339
C +D D TDED ++ V
Sbjct: 1173 CGDGSDEKIELCGNSTCAANQFSCANGRCIPIYWLCDGDNDCYDGTDEDKERC---PPVQ 1229
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + RC S QCV L CDG+ DC +G DE
Sbjct: 1230 CSALQFRCASGRQCVPLRNHCDGQNDCEDGSDE 1262
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE C + CT +F C KCI +
Sbjct: 3712 CDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADAICMSAERNCTAEEFRCNNNKCIAK 3771
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W+CD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3772 AWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCR-----DNS 3826
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DED + C + G+ +CA + KCIP W+CD E DC DN+DE D
Sbjct: 3827 DEDKQRCPSCDDVGEFRCATTGKCIPKRWMCDTENDCG-----DNSDE-LDPSCGGTTRP 3880
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3881 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3912
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTP-GQFSCGMGKCIPESWKC 224
P +CG + C+ L CD KPDC + DE P +CN P G C +CI + KC
Sbjct: 2797 PYNFQCGDGS-CILLGATCDSKPDCPDASDENPNYCNTRSCPDGYHLCTNRRCIDSAKKC 2855
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2856 NHIDDC-GDGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESLAT 2913
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +++C + CI LCD DC D DE ++ F N C
Sbjct: 2914 CPGLPIDCRGVKIRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2965
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2966 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2994
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 103/251 (41%), Gaps = 54/251 (21%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE--GPFCNAECTP-GQFSCGMGKCIPE 220
C + CG + +C+ +CDG+PDC +G DE C P G+F C C
Sbjct: 3630 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRP 3689
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL---------------- 264
CDG DC DGSDE N C C +CA + +CIP +
Sbjct: 3690 FQICDGNDDC-GDGSDEQN-CDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADA 3747
Query: 265 --CDEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQCALSK 301
E +C+ ++ N + + W + +C G +C+ S
Sbjct: 3748 ICMSAERNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSY 3807
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP+ C+ + DC DN+DED + S + V E RC ++ +C+ CD
Sbjct: 3808 RCIPNWAFCNGQDDCR-----DNSDEDKQRCPSCDDV----GEFRCATTGKCIPKRWMCD 3858
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 3859 TENDCGDNSDE 3869
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC 265
P F CG G CI CD DC + + PN C C +G C +++CI C
Sbjct: 2797 PYNFQCGDGSCILLGATCDSKPDCPDASDENPNYCNTRSCPDGYHLCT-NRRCIDSAKKC 2855
Query: 266 DEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC D +DE D C G C+ + CI +CD DC + + D
Sbjct: 2856 NHIDDCG-----DGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDE 2909
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ + C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2910 SLATCPGL----PIDCRGVKIRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMN 2960
Query: 385 LKCSHKCSPTPRG 397
+C+ P G
Sbjct: 2961 QQCAQHYVRCPSG 2973
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L + LL ++ P +D R
Sbjct: 1556 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPRKGVM 1615
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +D D +Y+ DS L+ ++ V D
Sbjct: 1616 FWTDWGQNPCIERASMDGTDRQVIVKTKIYWPNTIALDLTTDRVYFADSKLDFIDFVNYD 1675
Query: 158 GS 159
GS
Sbjct: 1676 GS 1677
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 138/392 (35%), Gaps = 113/392 (28%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D + +F D L + G G R + + SS+VI D LYW D +L
Sbjct: 3493 DYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVI--FDDYLYWADWNLR-- 3548
Query: 152 ESVRVD---GSHNAVLCH----PNELR-------------CGSSN--------------- 176
E +R D G + VL PN+LR CG +N
Sbjct: 3549 EIIRCDKWTGKNETVLKKTVQLPNDLRIVHPMKQPNYPNPCGDNNGGCSHLCLIGAGGNG 3608
Query: 177 -------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
Q V LS +P+C+ + +A+C P + W CDG D
Sbjct: 3609 YTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIP------------KLWYCDGEPD 3656
Query: 230 CLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
C DGSDEP I C G+ QC + C +CD DC N D+ D
Sbjct: 3657 C-RDGSDEPGESICGQRICPVGEFQCT-NHNCTRPFQICDGNDDCGDGSDEQNCDKACDP 3714
Query: 287 FHQCFNGQVQCALSKKCIPHNWL------------------CDEEMDCSTDDIVDNTDED 328
+ +CA + +CIP + E +C+ ++ N ++
Sbjct: 3715 W------MFKCAATGRCIPRRFTCDGDDDCGDRSDEADAICMSAERNCTAEEFRCNNNKC 3768
Query: 329 WDKYFSHNA----------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
K + + + C RC SS +C+ FC+G+ DC + DE
Sbjct: 3769 IAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCRDNSDE 3828
Query: 373 G----PFCNNKADCENLKCSHKCSPTPRGAMC 400
P C+ D +C+ P+ MC
Sbjct: 3829 DKQRCPSCD---DVGEFRCATTGKCIPKRWMC 3857
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G +R +V+++I P+++ +D+ ++YW D + +E +G + ++
Sbjct: 2603 RIERSNLAGGSRKVIVSESISLPAAIAVDFRNQMIYWADVNRLNIEVADYNGENRKII 2660
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F ++E A M G NR LV + S +V+D +YW D ++ +ES+
Sbjct: 526 LRGEMFFTNQLKIEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 585
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 586 YQGNDRRIVAQ 596
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3479 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3516
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + +WD I+ D R +K A +G N + ++ + + +D+ LYW
Sbjct: 1515 NAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFISDGLDITEGIALDWVGRNLYWV 1574
Query: 145 DSHLNTVESVRV-DGSHNAVLCHPN 168
DS LNT+E + D +L H N
Sbjct: 1575 DSSLNTIEVANLEDPKQRTLLVHQN 1599
>gi|315506985|ref|NP_001186819.1| very low-density lipoprotein receptor precursor [Sus scrofa]
gi|315139195|gb|ADT80790.1| very low density lipoprotein receptor [Sus scrofa]
Length = 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 160/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 GAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCSNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L ++ L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGSKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R LVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRALVTTDIQWPNGITLDLIKGRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|332249527|ref|XP_003273909.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Nomascus leucogenys]
Length = 873
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPNEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCR-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 INKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPNEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCRDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDINKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLESLEF 643
>gi|332831717|ref|XP_003312082.1| PREDICTED: very low-density lipoprotein receptor isoform 1 [Pan
troglodytes]
gi|410213730|gb|JAA04084.1| very low density lipoprotein receptor [Pan troglodytes]
gi|410335617|gb|JAA36755.1| very low density lipoprotein receptor [Pan troglodytes]
Length = 845
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHIKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|409212250|gb|AFV32171.1| vitellogenin receptor [Actias selene]
Length = 1812
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 125/388 (32%), Positives = 171/388 (44%), Gaps = 74/388 (19%)
Query: 158 GSHNAVL---------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECT 206
G H+AV C N+ C S C++ S CDG DC +G DEGP C+ C
Sbjct: 1000 GKHSAVADLTTLPPLKCDWNQFTCKESPVCISRSLLCDGAKDCPDGSDEGPDNCDTLACF 1059
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+F C G CI ++WKCDG DC D SDE + C G QC ++CI CD
Sbjct: 1060 DTEFMCASGSCILKTWKCDGDQDC-NDASDEIDCESVSCKPGYYQCR-DRECIELKKRCD 1117
Query: 267 EEMDCSTDDIVDNTDE----DWDKFHQCFNGQVQCALSKK-CIPHNWLCDEEMDC--STD 319
DC + DE + K H+C + C ++ C+P C+ + DC TD
Sbjct: 1118 GHQDCFDYSDEEECDEPVAVEEPKIHRCAEWEYSCERNRSICLPITARCNMKTDCPGGTD 1177
Query: 320 DIV---------------------------------DNTDEDWDK-----YFSH-NAVLC 340
+I D +DE D SH V+
Sbjct: 1178 EIGCDYRCTPHGMFGCKQQIRCLAMNRVCDGNKECDDGSDETPDACALVNRTSHLYPVML 1237
Query: 341 HP-----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
+P + CG + QC+ ++ CD P+C +G DE C + C+N C+H C TP
Sbjct: 1238 YPAAECRDGFLCG-NGQCIEWAEVCDRTPNCFDGSDESIHCFSA--CDNNTCAHACQATP 1294
Query: 396 RGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C CPAG + P++ C D DEC G C Q C NT S++CSC GY LR D +SC
Sbjct: 1295 LGPRCLCPAGYSAAPDRRTCADVDECRA-GLCSQACVNTPGSFLCSCHHGYALRSDRRSC 1353
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
AV SI++ S +R + +G
Sbjct: 1354 KAVT----GNMSILYVSGNTVRSVSADG 1377
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 118/289 (40%), Gaps = 39/289 (13%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-------QCALSKKCIPHN 262
F C G CI +S CDG VDC +DG+DE N C+ + Q C SKKCIP++
Sbjct: 36 FPCMSGGCIQQSQYCDGKVDC-DDGTDE-NYCLDHKPDAQFCNETHQFMCRDSKKCIPNH 93
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDD 320
W+C+ ++DC D +DE G+ + L KCI WLCD DC
Sbjct: 94 WICNNDIDCD-----DGSDELNCTLVPVATGKCKGFLCGDGKCISSLWLCDGSYDCKDKS 148
Query: 321 IVDNTDEDWDKYFSHNAV--------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + SH+ + L + +C S+ C+ CDG DC +G DE
Sbjct: 149 DENSPENCRHSLLSHSMLSGSDCQDWLGGRRQYKCTDSSFCLPSEMMCDGMQDCKDGSDE 208
Query: 373 GPFCNN-KADCENLKC---SHKCSPTPRGAMCFC-----PAGQNPNKTQCVDADEC-LID 422
FC N C N C C P G C C N + C D DEC L
Sbjct: 209 RSFCANWHTMCANHTCLGDKASCVPDRAGPTCECLNHLNLRRYNTSTGACDDIDECALAR 268
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C C N + C C +GY C A P ++F ST
Sbjct: 269 PQCSHYCVNADGHFTCECADGYFKDELKYLCYATG-----PEPLLFYST 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 76/192 (39%), Gaps = 44/192 (22%)
Query: 143 WCDSHLN----TVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+CD ++ T E+ +D +A C+ ++ C S +C+ C+ DC +G DE
Sbjct: 49 YCDGKVDCDDGTDENYCLDHKPDAQFCNETHQFMCRDSKKCIPNHWICNNDIDCDDGSDE 108
Query: 198 -----GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFN--- 247
P +C F CG GKCI W CDG DC +D SDE P C H +
Sbjct: 109 LNCTLVPVATGKCK--GFLCGDGKCISSLWLCDGSYDC-KDKSDENSPENCRHSLLSHSM 165
Query: 248 -------------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKF-- 287
Q +C S C+P +CD DC D +DE +W
Sbjct: 166 LSGSDCQDWLGGRRQYKCTDSSFCLPSEMMCDGMQDCK-----DGSDERSFCANWHTMCA 220
Query: 288 -HQCFNGQVQCA 298
H C + C
Sbjct: 221 NHTCLGDKASCV 232
>gi|354507289|ref|XP_003515689.1| PREDICTED: very low-density lipoprotein receptor [Cricetulus
griseus]
Length = 657
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/362 (33%), Positives = 170/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 61 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 120
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 121 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTS-SCIPLSWVCDDDADCS-----DQSDES 173
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------- 316
++ +C ++QC S +CI W CD + DC
Sbjct: 174 LEQCGRQPVIHMKCPASEIQCG-SGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFE 232
Query: 317 --------------STDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCD 361
D VD +DE N C P + +C S +C+ +SK CD
Sbjct: 233 CEDGSCIHGSRQCNGIRDCVDGSDE----VNCKNVNQCLGPGKFKC-RSGECIDISKVCD 287
Query: 362 GKPDCSNGEDEGPF--CN-NKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ DCS+ DE P CN N+ N CSH C G C C AG + ++ C D D
Sbjct: 288 QEQDCSDWSDE-PLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 346
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 347 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 402
Query: 478 HL 479
L
Sbjct: 403 GL 404
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 159/361 (44%), Gaps = 70/361 (19%)
Query: 151 VESVRVDGSHNAVL----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE- 204
V ++ GS+N C ++ C + QCV CDG PDC +G DE P C+
Sbjct: 2 VLALHTVGSYNTTAIKKTCAESDFVC-KNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRT 60
Query: 205 CTPGQFSCGM--GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
C + SCG +CIP SW+CDG DC ++G DE N C + C+ S +C+ N
Sbjct: 61 CRINEISCGARSTQCIPVSWRCDGENDC-DNGEDEENCGNITCSADEFTCS-SGRCVSRN 118
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
++C+ + DC D +DE C + QC+ S CIP +W+CD++ DCS
Sbjct: 119 FVCNGQDDCD-----DGSDELDCAPPTCGAHEFQCSTS-SCIPLSWVCDDDADCS----- 167
Query: 323 DNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFC 376
D +DE ++ + C +E++CGS +C+ CDG PDC +G DE C
Sbjct: 168 DQSDESLEQCGRQPVIHMKCPASEIQCGSG-ECIHKKWRCDGDPDCKDGSDEVNCPSRTC 226
Query: 377 N-NKADCENLKCSH---KCSPT------------PRGAMCFCPAGQNPNKTQCVD----- 415
++ +CE+ C H +C+ C P +C+D
Sbjct: 227 RPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVC 286
Query: 416 ------------------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
+ECL+ +G C C + + Y C C G+ L D K+C +
Sbjct: 287 DQEQDCSDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDI 345
Query: 457 N 457
+
Sbjct: 346 D 346
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N + A+ + +++ + + +S L A+ L NS DL
Sbjct: 445 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 503
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 504 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTDDIQWPNGITLDLVKSRLY 563
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV +DG ++ E
Sbjct: 564 WLDSKLHMLSSVDLDGQDRRIVLKSLEF 591
>gi|432845794|ref|XP_004065856.1| PREDICTED: low-density lipoprotein receptor-like [Oryzias latipes]
Length = 887
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 160/331 (48%), Gaps = 39/331 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC ++ QC++LS CD DCS+G DE C P F C C+P W+C
Sbjct: 112 CKNDEFRC-ANGQCISLSFVCDNDNDCSDGSDETTCSKPTCNPLSFQCNNSVCVPSLWRC 170
Query: 225 DGFVDCLEDGSDE-PNTC-----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
DG DC DGSDE P TC +C + +CA + +CIP +W CD +DC D
Sbjct: 171 DGDEDC-ADGSDEWPETCGGKKPAAKCSVSEFECA-NGQCIPGSWRCDGGIDCD-----D 223
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE C GQ QC C+ N C+ DCS D +DE + +
Sbjct: 224 RSDELNCSRPVCLEGQFQCG-DGSCLQGNLKCNSVRDCS-----DGSDE------TDCST 271
Query: 339 LC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTP 395
C P+E +C SS +C+++ CD DCS+G DE +C N CSH C+
Sbjct: 272 ACDAPSEFKC-SSGECISMENVCDKTKDCSDGSDEPESSCGINECSTANGGCSHHCNDLK 330
Query: 396 RGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C CPAG Q C D +EC +C Q C N SY C C GY + P +C
Sbjct: 331 IGFNCSCPAGYKLKADQRNCEDINECAEADTCSQICINLPGSYKCDCEWGYKIDPVSNTC 390
Query: 454 TAVN--VPQDEPASIIFSSTVDIRRIHLNGS 482
A + VP +++F++ D+R+I ++ S
Sbjct: 391 KAESGTVP-----ALLFTTRHDVRKILVDHS 416
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 156/353 (44%), Gaps = 69/353 (19%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNAECTPGQFS 211
+ DG A+ C ++L+CG+ +CV CDG DC +G DE + C P QF+
Sbjct: 22 AKTDG---ALTCSSSQLKCGN-GRCVTRRWICDGTDDCGDGTDELLSTCASKTCLPSQFN 77
Query: 212 CG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CG + +C+P+SW CDG DC +G+DE N + QC N + +CA + +CI +++CD +
Sbjct: 78 CGAPINQCVPKSWHCDGKADC-SNGADEKNCTVKQCKNDEFRCA-NGQCISLSFVCDNDN 135
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DCS D +DE C QC S C+P W CD + DC+ D +DE W
Sbjct: 136 DCS-----DGSDETTCSKPTCNPLSFQCNNS-VCVPSLWRCDGDEDCA-----DGSDE-W 183
Query: 330 DKY--FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGPF-- 375
+ A C +E C ++ QC+ S CDG DC + D EG F
Sbjct: 184 PETCGGKKPAAKCSVSEFEC-ANGQCIPGSWRCDGGIDCDDRSDELNCSRPVCLEGQFQC 242
Query: 376 -----------CNNKADC----ENLKCSHKCSPTPRGAMCF----------------CPA 404
CN+ DC + CS C P C C
Sbjct: 243 GDGSCLQGNLKCNSVRDCSDGSDETDCSTACD-APSEFKCSSGECISMENVCDKTKDCSD 301
Query: 405 GQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
G + ++ C + +G C C + + + CSC GY L+ D ++C +N
Sbjct: 302 GSDEPESSCGINECSTANGGCSHHCNDLKIGFNCSCPAGYKLKADQRNCEDIN 354
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS--HNAVL 164
++EK+G++G R LVT+NI P+ + +D LYW DS L+TV S+ V+G H V+
Sbjct: 538 KIEKSGLNGAGRVALVTENIVSPNGITLDMVNQRLYWVDSKLHTVFSIDVNGGTRHRVVV 597
>gi|332253109|ref|XP_003275692.1| PREDICTED: low-density lipoprotein receptor [Nomascus leucogenys]
Length = 747
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-ENGSDEQGCPPRTCSQDEFRCH-DGKCIYRQFVCDSDQDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCGGLDVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNNKADCENLK 386
++ C E C S +C+ S CDG PDC + DE G N+ N
Sbjct: 192 GDSGPCSAFEFHC-RSGECIHSSWRCDGGPDCKDKSDEENCGMGGAGGGGTNECLDNNGG 250
Query: 387 CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C+ G C CP G Q + +C D DEC +C Q C N Y C C EG+
Sbjct: 251 CSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQ 310
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L P K+C AV A +IF++ ++R++ L+ S
Sbjct: 311 LDPHSKACKAVG----SIAYLIFTNRHEVRKMTLDRS 343
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 20/99 (20%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA ++ K G++G + LVT+NIQWP+ + +D LYW DS L+ + S
Sbjct: 462 WGTPA--------KIRKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHCISS 513
Query: 154 VRVDGSHNAV-------LCHP-----NELRCGSSNQCVA 180
+ V+G + L HP E+R G + +A
Sbjct: 514 IDVNGGNRKTVLEDEKRLAHPFSLAIFEVRLGRVTEVLA 552
>gi|326922793|ref|XP_003207629.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Meleagris gallopavo]
Length = 4696
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 163/328 (49%), Gaps = 38/328 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C S+ QC+ + CD DC++G DE C Q SC G C S +C
Sbjct: 148 CSSQQFTC-SNGQCIPSTYRCDRVKDCTDGTDERDCRYPRCE--QLSCANGACFNASQRC 204
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C H C + Q QCA + +CIP ++CD + DC D +DE+
Sbjct: 205 DGKVDC-RDTSDEAN-CTHGCISTQFQCA-NGECIPQAFMCDHDDDCG-----DRSDENS 256
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C C S +CI +W+CD + DC ++ + ++ + C+P +
Sbjct: 257 CTYATCRGNFFTCP-SGRCIHQSWICDGDDDCEDNEDERGCESNYHE--------CYPGD 307
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S C+ + K CDG DC GEDE G C N + C L C ++C +P G M
Sbjct: 308 WACPESGHCIPIGKVCDGTADCPAGEDETNITAGRHC-NISQCAALSCQYRCHSSPSGGM 366
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG--KSC 453
C+CPAG N ++T C+D D+C + G CDQ C + + C C EGY L ++
Sbjct: 367 CYCPAGYTISSNDSRT-CIDFDDCKMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRAN 425
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
T+ V ASIIFS+ D+ L+G
Sbjct: 426 TSAGV-----ASIIFSNGRDLLIGDLHG 448
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 142/304 (46%), Gaps = 33/304 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + +C ++C+ CDG DC +G DE C C+ +F C G +CI ++
Sbjct: 1186 CEPRQFQC-PDHRCIDPYYVCDGDKDCVDGADEHD-CIYNCSGTEFKCVSGDQCISSYYR 1243
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C G+ QC C+P NW CD +DC+ D +
Sbjct: 1244 CDGVFDC-NDHSDETDCPTRPPGMCHQGEFQCQSDGNCVPANWECDGHIDCA-----DGS 1297
Query: 281 DEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE H+C +L + C+ W+CD + DC D+ D D
Sbjct: 1298 DE----HHRCPARTCPPSLFRCDNGNCVYRAWICDGDNDCR--DMSDERD------CPTQ 1345
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + +C + CV LSK CD DC NG DE P CN ++ N C+H+C P
Sbjct: 1346 PFRCPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGP 1405
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
GA C CP G N +KT C D +EC G C Q C N S+ C C EGY L +G++
Sbjct: 1406 FGAQCTCPVGYQLANDSKT-CEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETNGRT 1464
Query: 453 CTAV 456
C
Sbjct: 1465 CKVA 1468
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 160/368 (43%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
++ C NE RC +S +C+ +CD DC++G DE C C+ QF C G+CI
Sbjct: 2898 SMTCTNNEFRC-TSGRCIPAHWYCDQGIDCADGSDEPASCEPHVRTCSSDQFRCDDGRCI 2956
Query: 219 PESWKCDGFVDCLE-DGSDEPNTCIHQ-CFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
P +W CDG DC + D+ ++C ++ C + CA ++ +CIP W+CD + DCS
Sbjct: 2957 PATWICDGDNDCGDMSDEDQRHSCANRSCTAAEFTCANNRPPLRRCIPRAWICDGDADCS 3016
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
+D D +DE + C Q C
Sbjct: 3017 DALDEHQNCTRRSCTENEFTCNNGLCIRSAYRCDRRNDCGDASDERGCTYEPCQQHQFTC 3076
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI ++CD + DC D +DE + S C P+ +C + N C+ ++
Sbjct: 3077 Q-NGRCIAKAYICDGDNDCG-----DESDE-LEHLCSTPEATCSPHHFKCDNGN-CIEMA 3128
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
K C+ DC + DE G N +D C H C T C C G +K C
Sbjct: 3129 KVCNRLDDCLDNSDEKGCGINECSDPSISGCDHDCMDTQTSFYCSCHPGYKLMSDKRTCD 3188
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY PDGKSC + +IFS+
Sbjct: 3189 DIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQ---NSNISPYLIFSNRYY 3245
Query: 474 IRRIHLNG 481
+R + +G
Sbjct: 3246 LRNLTADG 3253
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKC 217
+H +C + C + +C+ + CDG+ DC +G DE P C + CT GQF C G C
Sbjct: 3543 AHCLPMCSSTQFLCADTERCIPIWWKCDGQRDCRDGSDEPPTCPHRYCTVGQFQCNDGNC 3602
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ C+ DC + ++P C HQC Q QCA +K+CIP W CD E DC
Sbjct: 3603 TSPHFLCNTQSDCHDRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG---- 3657
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DED C GQ +C + +CIP W CD + DC DN+DE + +
Sbjct: 3658 -DNSDEDVTHCASRTCPPGQFKCD-NGRCIPELWKCDVDDDCG-----DNSDEPFHECMG 3710
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS------ 388
+ E C +S +C+ L C+G DC + DE CE + CS
Sbjct: 3711 PAYRCDNHTEFSCRTSYRCIPLWAVCNGNDDCRDNSDE-------QGCEEMTCSPSGDFR 3763
Query: 389 ---HKCSP 393
H+C P
Sbjct: 3764 CDNHRCIP 3771
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 139/343 (40%), Gaps = 95/343 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ +AGM G+++ +++ ++WP+ L IDY D LYW D+H
Sbjct: 3383 IGRAGMDGKDKMVIISTKLEWPNGLTIDYTNDKLYWADAHLNYIEYSDLDGHHRHTVYDG 3442
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3443 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRTVLVNTTHRPFDIHVYHPYRQPFV 3502
Query: 171 --RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCG-MG 215
CG++N S C K E P C C+ QF C
Sbjct: 3503 NNPCGTNNG--GCSHLCLIKAGGQGYSCECPDNFMIVQFGNTAHCLPMCSSTQFLCADTE 3560
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+CIP WKCDG DC DGSDEP TC H+ C GQ QC PH +LC+ + DC
Sbjct: 3561 RCIPIWWKCDGQRDC-RDGSDEPPTCPHRYCTVGQFQCNDGNCTSPH-FLCNTQSDCH-- 3616
Query: 275 DIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED HQC Q QCA +K+CIP W CD E DC DN+DED
Sbjct: 3617 ---DRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG-----DNSDEDVTHC 3667
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
S C P + +C + +C+ CD DC + DE PF
Sbjct: 3668 ASRT---CPPGQFKC-DNGRCIPELWKCDVDDDCGDNSDE-PF 3705
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 98/328 (29%), Positives = 141/328 (42%), Gaps = 28/328 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F C G C+ E ++C
Sbjct: 3796 CTESEYRCDNL-RCIPSHWVCDHDDDCEDNSDERDCELRTCHPGYFQCNSGHCVAERFRC 3854
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D SDE TC + NG + +C H +C + D D D+
Sbjct: 3855 DGNADCL-DFSDEI-TCPTRYPNGTYCPPMMFECKNH--VCIQPY-WKCDGDNDCGDDSD 3909
Query: 285 DKFHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
++ H C + + + +CI + LC++E DC D +DE +
Sbjct: 3910 EELHLCLDIACESPFRFRCENNRCIYSHELCNQEDDCG-----DGSDEKEEHCREPTPRP 3964
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA 398
C E +C + N C+ L CD DC + DE G + C C H C+ G
Sbjct: 3965 CTTEEFKCSNGN-CIPLHYVCDNYDDCGDHFDEMGCNPGTERTCAENICEHNCTNLSEGG 4023
Query: 399 -MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKS 452
+C C G N+ C D +EC I G+C Q C N+ SY C C +G+ D GK
Sbjct: 4024 FICSCRPGYKASENNRNSCDDINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQ 4083
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A P ++ V IRR +++
Sbjct: 4084 CAA----NGNPPLLLLPDNVRIRRYNIS 4107
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 95/215 (44%), Gaps = 34/215 (15%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N +L EL G+ + L+ F + C C GQF CG G+CIP
Sbjct: 36 QNEILLPQLELIVGAEGIIIILAGFEE-------------ICMFRCGGGQFRCGNGRCIP 82
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CDG DC +D +DE C Q QC +CIP +W+CD+E DC D
Sbjct: 83 ADWRCDGARDCSDD-TDEAGCPQPTCEGNQFQCQTDGECIPRSWVCDDEEDCE-----DG 136
Query: 280 TDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE C + Q C+ + +CIP + CD DC+ D TDE +Y +
Sbjct: 137 SDEHQQCPGRTCSSQQFTCS-NGQCIPSTYRCDRVKDCT-----DGTDERDCRYPRCEQL 190
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C ++ C S+ CDGK DC + DE
Sbjct: 191 SC--------ANGACFNASQRCDGKVDCRDTSDEA 217
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 101/223 (45%), Gaps = 41/223 (18%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P L+CGS + +CV CDG DC + DE N C+ F+C G+CI
Sbjct: 1058 PPTLQCGSYSFSCNNGRCVPRYYQCDGIDDCHDNSDEQNCGSLNNTCSSSAFTCASGQCI 1117
Query: 219 PESWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
P W+CD DC DGSDE P +C F + +CIP WLCD + DC
Sbjct: 1118 PSRWRCDKHNDCF-DGSDELRCPTQGPTSCPETLFTCD-----NNRCIPRIWLCDTDNDC 1171
Query: 272 STDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE F C Q QC +CI ++CD + DC VD DE
Sbjct: 1172 G-----DGSDEKNCTFTGTCEPRQFQCP-DHRCIDPYYVCDGDKDC-----VDGADE--- 1217
Query: 331 KYFSHNAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H+ + C E +C S +QC++ CDG DC++ DE
Sbjct: 1218 ----HDCIYNCSGTEFKCVSGDQCISSYYRCDGVFDCNDHSDE 1256
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 105/222 (47%), Gaps = 25/222 (11%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C + C G C CIP ++ CDG DC
Sbjct: 2826 NNGRCISLQYVCNGVNNCYDNGTSDERNCPDRTCQSGFTKCQSTNICIPRTYLCDGDNDC 2885
Query: 231 LEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---K 286
+ + P C+ C N + +C S +CIP +W CD+ +DC+ D +DE
Sbjct: 2886 GDMSDESPTHCVSMTCTNNEFRCT-SGRCIPAHWYCDQGIDCA-----DGSDEPASCEPH 2939
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + Q +C +CIP W+CD + DC D +DED ++ + C E
Sbjct: 2940 VRTCSSDQFRCD-DGRCIPATWICDGDNDCG-----DMSDEDQRHSCANRS--CTAAEFT 2991
Query: 347 CGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C ++ +C+ + CDG DCS+ DE C ++ EN
Sbjct: 2992 CANNRPPLRRCIPRAWICDGDADCSDALDEHQNCTRRSCTEN 3033
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C++ CD DC +G DE A C P F+CG G+C+P ++CD + DC D
Sbjct: 2748 HCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCVPYHYRCDHYNDC-GDN 2806
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CI ++C+ +C + +DE C +G
Sbjct: 2807 SDEAGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYDN---GTSDERNCPDRTCQSGF 2863
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP +LCD + DC D +DE S + C NE RC +S +C+
Sbjct: 2864 TKCQSTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---MTCTNNEFRC-TSGRCI 2914
Query: 355 ALSKFCDGKPDCSNGEDEGPFC 376
+CD DC++G DE C
Sbjct: 2915 PAHWYCDQGIDCADGSDEPASC 2936
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 128/348 (36%), Gaps = 98/348 (28%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R+P+V+ N+ WP+ L +DY + LYW D++L +E + G++ V+
Sbjct: 2566 NAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCTLTGTNREVI 2625
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKFCDGKPD--------- 190
HP + + S+Q V + D
Sbjct: 2626 VSTALHPFAMTLFDQHIYWTDWNTRSIYRANKYDGSDQIVMIMNLPQRPMDIHVWAKSKQ 2685
Query: 191 --CSNGEDE-GPFCNAECTPGQFSCGMGKCIPES--WKCDGFVDCLEDGSDEPNTCIHQC 245
C+N ++ C+ C PG + +C E + + C+ D +T C
Sbjct: 2686 QQCTNPCNQFNGGCSHICAPGP-AGAECQCPSEGRWYLANNNKHCIVDNGTRCDTGFFTC 2744
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKC 303
NG CI W CD + DC D +DE FH C C + +C
Sbjct: 2745 LNGH--------CISERWKCDNDNDCG-----DGSDELESVCAFHTCQPTAFTCG-NGRC 2790
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDE--------DWDKYFSHNA------------------ 337
+P+++ CD DC DN+DE D F+ N
Sbjct: 2791 VPYHYRCDHYNDCG-----DNSDEAGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYD 2845
Query: 338 -----------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +C S+N C+ + CDG DC + DE P
Sbjct: 2846 NGTSDERNCPDRTCQSGFTKCQSTNICIPRTYLCDGDNDCGDMSDESP 2893
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 56/111 (50%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH E +C S CV + CDG DC++G DE C A C P F C G C+ +W
Sbjct: 1266 MCHQGEFQCQSDGNCVPANWECDGHIDCADGSDEHHRCPARTCPPSLFRCDNGNCVYRAW 1325
Query: 223 KCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC D SDE + T +C + Q QC C+ + +CD DC
Sbjct: 1326 ICDGDNDC-RDMSDERDCPTQPFRCPSWQWQCPGHSICVNLSKVCDNSADC 1375
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 144/374 (38%), Gaps = 81/374 (21%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLPA----PEIFPLD---- 105
LA ++ +N + +++S +RL R A + +L N + IF D
Sbjct: 826 LAFDWISKNLYWTDPRYRSISVMRLADKSRRAIVQNLNNPRSIVVHPVIGYIFWTDWFRP 885
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------S 159
++ +A G + P+V + WP+ L ID++ LYW D+ + +E DG
Sbjct: 886 AKIMRAWSDGSHGLPIVNTTLGWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLE 945
Query: 160 HNAVLCHPNEL-------------------------------RCGSSNQCVALSKFCD-- 186
A + HP L R G SN + K D
Sbjct: 946 RIAQMTHPFGLTIFGGYAYFTDWRLGGIVRVRKSDGGEMTIIRRGISN--IMHVKAYDAH 1003
Query: 187 ---GKPDCSNGEDEGPFCNAECTP---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
G C+ G + C+ C P Q CG C + C+ED S+EP T
Sbjct: 1004 SQIGSNYCNRGTNPNGDCSHFCFPVPNFQRVCG---CPYGMKLASNQLTCVEDPSNEPPT 1060
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCA 298
QC + C + +C+P + CD DD DN+DE + C + CA
Sbjct: 1061 L--QCGSYSFSCN-NGRCVPRYYQCD-----GIDDCHDNSDEQNCGSLNNTCSSSAFTCA 1112
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S +CIP W CD+ DC D +DE + + C P L +N+C+
Sbjct: 1113 -SGQCIPSRWRCDKHNDC-----FDGSDE--LRCPTQGPTSC-PETLFTCDNNRCIPRIW 1163
Query: 359 FCDGKPDCSNGEDE 372
CD DC +G DE
Sbjct: 1164 LCDTDNDCGDGSDE 1177
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++++ WP+ L IDY N D +YW DS N +ES+R DG+ +
Sbjct: 4246 KIECAWMDGQQRQTLVSEDLGWPTGLSIDYLNNDRIYWSDSKENIIESMRHDGTDRTTVL 4305
Query: 166 H 166
H
Sbjct: 4306 H 4306
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR LV + WP+ + +D LYW DS + +E+V DG +
Sbjct: 572 DPKVERAFMDGTNRQDLVKTKLGWPAGITLDIVSKRLYWVDSRFDYIETVTYDGLQRRTI 631
Query: 165 CHPNEL 170
H L
Sbjct: 632 AHGGSL 637
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+EKA M G+ R+ ++ I WP+ L IDY +LY+ D++L+ ++ +G +
Sbjct: 1615 RIEKASMDGKFRTVIINSKIYWPNGLCIDYPNKLLYFADAYLDYIDFCDYNGNNRRQVVA 1674
Query: 160 HNAVLCHPNEL 170
+ +L HP+ L
Sbjct: 1675 SDLILQHPHAL 1685
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL------NGTHTLALEFNHRNQSL--CFIQQ 74
+ CD S+ + + D YF+ ++ NG +A+++ N F+ +
Sbjct: 2147 YWCDFSSTVSSQNAIRKIKPD-GSYFRNVVTNGIGRNGIRGIAIDWVAGNLYFTNAFLTE 2205
Query: 75 QNVSSVRLRCAQINDLLNSW-DLPAPEI------------FPLDERLEKAGMHGENRSPL 121
+ +RL LL + D+P + + + ++E+A + NR+ L
Sbjct: 2206 TFIEVLRLNTTYRRVLLKTIIDMPRHIVVDPKNRYLFWADYGQNPKIERAFLDCTNRTVL 2265
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
V++ I P L ID++ +YW D L+ + ++ DG ++
Sbjct: 2266 VSEGIVTPRGLAIDHSNGNIYWVDDSLDMIARIQPDGGDVEIV 2308
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 58 LALEFNHRNQSLC-FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD---ERLEKAGM 113
L L RNQ + I Q+ S L N + +D + IF D +++ A
Sbjct: 1473 LILLVASRNQIVVDNITSQSHSIYSLIRDGRNIVAIDFDSISDRIFWSDTTQDKIWSAYQ 1532
Query: 114 HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+G +R + + S+ +D+ LYW D L T+E ++DGSH VL N
Sbjct: 1533 NGTDRKIVFDSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISEN 1587
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + A Q + C + + G C+Q C +H
Sbjct: 665 NKFSESNPQVIYQSSLRPYGVTVYHAARQPYVRNPCGNNN-----GGCEQICVLSHKTDN 719
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 720 DGLGYRCRCILGFDLHIDGRHCVAVQ------QFLLFSSQLAVRGIPFNLS 764
>gi|195481687|ref|XP_002101739.1| GE15450 [Drosophila yakuba]
gi|194189263|gb|EDX02847.1| GE15450 [Drosophila yakuba]
Length = 3879
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/341 (34%), Positives = 158/341 (46%), Gaps = 45/341 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAEC-TPG 208
C +L CG + C+ CD DC + DE FCN P
Sbjct: 69 CETPQLNCGQYTFNKTYCIPPHYRCDMIEDCEDKSDEAQCTYRKCQHTDLFCNTPTGAPA 128
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+ + G C+P+ +CDG++DC G DE C Q +CA KCI C+
Sbjct: 129 EGARLTGPCVPKEKRCDGYLDC-RTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHR 187
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE F C + Q +C + CIP+N+ CD DC+ D +DE
Sbjct: 188 DDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DKSDE- 235
Query: 329 WDKYFSHNAVLCHPNELRC---GSSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ A+ C N+ C G+S +C+ S+ CDG DC +G DE C+ A C
Sbjct: 236 ----ANCTAIACPDNKHLCPRGGASGTPKCILKSQLCDGNRDCEDGTDEETNCS-MASCP 290
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
L C KC P+ G +C+C GQ+ P+ CVD DEC G CDQ CTNT SY C C
Sbjct: 291 ALSCEFKCGPSLTGGVCYCKPGQSLAPDNRTCVDLDECAEWGHCDQLCTNTMGSYTCQCA 350
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+GYTL D K C A P +IF+ I R+ +G+
Sbjct: 351 QGYTLINDSK-CIA---PDANNLQLIFAHDRAIMRMLPHGT 387
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 149/364 (40%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2060 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2119
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2120 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2173
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2174 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2226
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2227 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEF 2285
Query: 382 -CENLKCSHK---------CSPTPRGAMCF-----CPAGQNP-NKTQCVD---------- 415
C+N KC C C CP GQ QC+D
Sbjct: 2286 TCQNFKCIRNQSRCDGEDDCGDHSDEVGCTKENITCPQGQFACTNGQCIDYSLVCNKYPD 2345
Query: 416 -ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ADE C ++ C C +T Y C C EGY L DGK+C V+ +
Sbjct: 2346 CADESDEPAHCNVNECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLE 2405
Query: 462 EPAS 465
+P +
Sbjct: 2406 QPGA 2409
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 152/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2145 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2200
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI W+C
Sbjct: 2201 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWIC 2257
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + CD E DC
Sbjct: 2258 DHDNDCG-----DGTDEGKFCNSKYKTCSAQEFTCQ-NFKCIRNQSRCDGEDDCG----- 2306
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE + + C + C ++ QC+ S C+ PDC++ DE CN A
Sbjct: 2307 DHSDE---VGCTKENITCPQGQFAC-TNGQCIDYSLVCNKYPDCADESDEPAHCNVNECA 2362
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYV 437
E +C HKC T G C C G + C D DECL G+C Q C+NT +
Sbjct: 2363 KVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFY 2422
Query: 438 CSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + P +IF++ +R + ++G
Sbjct: 2423 CKCDETYYERQNDEHTCKRKD---KIPPWLIFTNKYYVRNMSVDG 2464
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 158/377 (41%), Gaps = 82/377 (21%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIP 219
C+P + +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI
Sbjct: 2979 CNPETDFKCGN-NRCIPKQWMCDFADDCGDASDENEAVCKGRYRECSESEFRCGNGKCIS 3037
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------- 271
W+CD DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 3038 SRWQCDHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVG 3095
Query: 272 -------------------------------STDDIVDNTDEDW---DKFHQCFNGQVQC 297
TDD D +DED F+ + QC
Sbjct: 3096 CPPRFPGGRYCPESRFQCNNNLCVSLSDLCDGTDDCGDGSDEDPSVCSDFNCDTLRRFQC 3155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ----- 352
+ + +C+ +CD D+ D +DE+ N LC + C Q
Sbjct: 3156 S-NHRCVARYQICD-----GVDNCGDGSDEN-------NMTLCASKQKPCDLYTQYQCAN 3202
Query: 353 --CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG- 405
C+ S+ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 3203 KHCIERSQVCDFSDDCGDASDE-LGCHHTSSCSEANRGGCQHHCHNLTDGGYICTCYPGY 3261
Query: 406 --QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E
Sbjct: 3262 IIAVDNKKKCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFHL-TDGAS--GVCRAEKE 3318
Query: 463 PASIIFSSTVDIRRIHL 479
++F++ +IR + L
Sbjct: 3319 DVILVFANGQEIRGLDL 3335
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G+NR LV I +P ++ + N +YW D L V N V
Sbjct: 1809 VREKIERSDLDGQNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 1865
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R SS N C + C +GK +C + +E
Sbjct: 1866 EMVKRLEDSPRDIRIYSSDRQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDDSTKVVNE 1925
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 1926 GRMCAPRNNTCEASKFYCKNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 1985
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 1986 -NGRCIFKSWKCDHENDCK-----DGSDELGCTYPPCVDGEFTCA-NGRCIPQAQVCNGV 2038
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2039 NDCKDNATSDETHERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2093
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2094 PLHCGQRTCPTNSFRCPNHRCIPA 2117
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 2853 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFSCKNGRCIPQL 2912
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 2913 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 2966
Query: 278 DNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + +C +C + +CIP W+CD DC D +DE+ +
Sbjct: 2967 DNSDELPENCPKCNPETDFKCG-NNRCIPKQWMCDFADDCG-----DASDEN-EAVCKGR 3019
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C++ CD + DC + DE
Sbjct: 3020 YRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3054
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 2782 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 2840
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 2841 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 2894
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + + + +CIP W+CD + DC D++DE N C RC G
Sbjct: 2895 CDPKTEFSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 2946
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 2947 QSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 2995
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C +CIP SW CDG DCL++ +E N C + + QC S +CIP N+ CD+E
Sbjct: 1026 FTCNNQRCIPRSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQEN 1084
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC DN+DE C Q CA + +CIP+ W CD E DC D TDE
Sbjct: 1085 DCG-----DNSDEQECGNVTCGTSQFACA-NGRCIPNMWKCDSENDCG-----DGTDE-- 1131
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+ + C + C + C+ S CDG
Sbjct: 1132 GDFCAEKT--CAYFQFTCPRTGHCIPKSWVCDG 1162
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 1977 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCTYPPCVDGEFTCANGRCIPQAQVC 2035
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2036 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2090
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2091 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2150
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2151 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2203
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2204 AQCIPKKWICDGDPDCVDGADENTTLHN 2231
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 2769 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 2826
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE C +C S +CI +W CD + DC
Sbjct: 2827 CTPSATICD-----GVDDCGDRSDEQNCDL-PCPLSDFKCKSSGRCILDSWRCDGDADCK 2880
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED F C P + +C+ CD DC + DE +
Sbjct: 2881 -----DGSDEDPAVCFKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 2932
Query: 378 NKADC 382
+ +C
Sbjct: 2933 RQRNC 2937
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 3/103 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE +C S +C+ + CD + DC + DE N C QF+C G+CIP WKC
Sbjct: 1061 CGSNEFQC-RSGRCIPQNFRCDQENDCGDNSDEQECGNVTCGTSQFACANGRCIPNMWKC 1119
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD 266
D DC DG+DE + C + C Q C + CIP +W+CD
Sbjct: 1120 DSENDC-GDGTDEGDFCAEKTCAYFQFTCPRTGHCIPKSWVCD 1161
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 3472 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 3531
Query: 166 HPNELR 171
++LR
Sbjct: 3532 RGDQLR 3537
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-K 286
V C+ D S EP + C N +++CIP +W+CD + DC +DN+DE+ +
Sbjct: 1005 VSCIPDPSAEPP--VQPCPNSWDFTCNNQRCIPRSWVCDGDDDC-----LDNSDEEQNCT 1057
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + + QC S +CIP N+ CD+E DC DN+DE V C ++
Sbjct: 1058 KPTCGSNEFQCR-SGRCIPQNFRCDQENDCG-----DNSDEQ-----ECGNVTCGTSQFA 1106
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C ++ +C+ CD + DC +G DEG FC K
Sbjct: 1107 C-ANGRCIPNMWKCDSENDCGDGTDEGDFCAEKT 1139
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ + R + + V C ++ RC + +C+ + C+ + DC + DE
Sbjct: 144 CDGYLD-CRTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHRDDCGDNSDEQGCNFP 202
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-----ALSKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + + KC
Sbjct: 203 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKHLCPRGGASGTPKC 261
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD DC D TDE+
Sbjct: 262 ILKSQLCDGNRDCE-----DGTDEE 281
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 2768 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 2822
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 2823 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 2870
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 2871 WRCDGDADCKDGSDEDPAVCFKRTCD 2896
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 2587 LQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 2646
Query: 162 AVL 164
+
Sbjct: 2647 HTV 2649
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G +PLVT I P L ID +YW DS L+T++ + +G++ V+
Sbjct: 1448 RIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGANRKVI 1505
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 743 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 802
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 803 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGSGLLVFKNVTLGWPNGLS 852
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 853 IDFKEDRVYWCDALLDHVQHANLDGT 878
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K++ PS L IDY++ LYW D+ +E +DG +
Sbjct: 1764 FGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLDGQNR 1823
Query: 162 AVL 164
+L
Sbjct: 1824 ELL 1826
>gi|449275400|gb|EMC84272.1| Low-density lipoprotein receptor-related protein 2, partial [Columba
livia]
Length = 4626
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 144/307 (46%), Gaps = 33/307 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPE 220
A C P + +C ++C+ CDG DC +G DE C C+ +F C G +CI
Sbjct: 1116 AGTCEPRQFQC-PDHRCIDPFYVCDGDKDCIDGADERD-CIYNCSATEFKCLSGDQCIST 1173
Query: 221 SWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
++CDG DC D SDE P C + QC CIP NW CD +DC+
Sbjct: 1174 YYRCDGVFDC-NDHSDEIDCPTRPPGMCHQNEFQCQSDGNCIPANWECDGHLDCA----- 1227
Query: 278 DNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE H+C +L + C+ H W+CD + DC D+ D D
Sbjct: 1228 DGSDE----HHRCPARTCPPSLFRCDNGNCVHHAWICDGDNDCR--DMSDERD------C 1275
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCS 392
C + +C + CV LSK CD DC NG DE P CN ++ N C+H+C
Sbjct: 1276 PTQPFRCPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECI 1335
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P GA C CP G N +KT C D +EC G C Q C N S+ C C EGY L +
Sbjct: 1336 QGPFGAQCTCPVGYHLANDSKT-CEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETN 1394
Query: 450 GKSCTAV 456
G++C A
Sbjct: 1395 GRTCKAA 1401
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 167/360 (46%), Gaps = 61/360 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C N+ +C + +C+ S CD + DC +G DE C C+ QF+C G+CIP ++
Sbjct: 40 CEGNQFQCKTDGECIPQSWVCDDEEDCEDGSDEHQQCPGRTCSSQQFTCSNGQCIPSAYW 99
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD DC DG+DE +C Q+ CA + C + CD ++DC D++DE
Sbjct: 100 CDRVKDCT-DGTDERVCHYPRC--EQLSCA-NGACFNASQRCDGKVDCR-----DSSDEA 150
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDE---------EMDCSTDDIVDN---------T 325
+ H C N Q QCA + +CIP ++CD E C+ N
Sbjct: 151 -NCTHGCTNTQFQCA-NGECIPQAFICDHDDDCGDGSDENSCTYATCRGNFFTCPSGRCI 208
Query: 326 DEDWDKYFSHNAVL-------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ W + C+P E C S C+ + K CDG DC GEDE
Sbjct: 209 HQSWICDGDDDCEDNEDERGCESGRHECYPGEWACPGSGHCIPVGKVCDGTADCPAGEDE 268
Query: 373 -----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQCVDADECLIDG 423
G C N ++C L C ++C +P G MC+CPAG N ++T CVD D+C + G
Sbjct: 269 TNITAGRHC-NISNCAALSCQYRCHSSPSGGMCYCPAGYIISSNDSRT-CVDFDDCKMWG 326
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDG--KSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
CDQ C + + C C EGY L ++ T+ V AS+IFS+ D+ L+G
Sbjct: 327 VCDQLCEDRVGHHQCHCVEGYFLEHHRHCRANTSAGV-----ASLIFSNGRDLLIGDLHG 381
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 158/368 (42%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
++ C +E RC +S +C+ +CD DC++G DE C + C+ QF C G+CI
Sbjct: 2831 SLTCTNSEFRC-TSGRCIPAHWYCDQGIDCADGSDEPASCVPQVRTCSSDQFRCDDGRCI 2889
Query: 219 PESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
P +W CDG DC + D N C + CA ++ +CIP W+CD + DCS
Sbjct: 2890 PATWICDGDNDCGDMSDEDQRHNCANRNCTAAEFTCANNRPPLRRCIPRAWVCDGDADCS 2949
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
+D D++DE + C Q C
Sbjct: 2950 DAFDEHQNCTRRSCTANEFTCSNGLCIRNTYRCDRRNDCGDSSDERGCIYEPCQQHQFTC 3009
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI ++CD + DC D +DE + + C P+ +C + N C+ +
Sbjct: 3010 Q-NGRCISKAYICDGDNDCG-----DESDE-LEHLCTTPEATCSPHHFKCDNGN-CIEMV 3061
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
K C+ DC + DE G N +D C H C+ T C C AG +K C
Sbjct: 3062 KVCNRLDDCLDNSDEKGCGINECSDPSISGCDHDCTDTQTSFYCSCHAGYKLMSDKRTCD 3121
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY PDGKSC + +IFS+
Sbjct: 3122 DIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQ---NSNISPYLIFSNRYY 3178
Query: 474 IRRIHLNG 481
+R + +G
Sbjct: 3179 LRNLTADG 3186
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 114/248 (45%), Gaps = 32/248 (12%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKC 217
+H +C + C + +C+ + CDG+ DC +G DE P C + C GQF C G C
Sbjct: 3476 AHCLPMCSSTQFLCADTERCIPIWWKCDGQRDCRDGSDEPPTCPHRYCPVGQFQCNDGNC 3535
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ C+ DC + ++P C HQC Q QCA +K+CIP W CD E DC
Sbjct: 3536 TSPHFLCNTQPDCHDRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG---- 3590
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DED C GQ +C + +CIP W CD + DC DN+DE +
Sbjct: 3591 -DNSDEDSTHCASRTCPPGQFKCD-NGRCIPQYWKCDVDDDCG-----DNSDEPLHECMG 3643
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS------ 388
+ E C ++ +C+ L C+G DC + DE CE + CS
Sbjct: 3644 PAYRCDNHTEFSCRTNYRCIPLWAVCNGNDDCRDNSDE-------QGCEEMTCSPYGDFR 3696
Query: 389 ---HKCSP 393
H+C P
Sbjct: 3697 CDNHRCIP 3704
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 137/340 (40%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ +AGM G+ ++ +++ ++WP+ L IDY D LYW D+H
Sbjct: 3316 IGRAGMDGKEKTVIISTKLEWPNGLTIDYTNDKLYWADAHLNYIEYSDLDGHHRHTVYDG 3375
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3376 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSDRTVLVNTTHRPFDIHVYHPYRQPFV 3435
Query: 171 --RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCG-MG 215
CG++N S C K E P C C+ QF C
Sbjct: 3436 NNPCGTNNG--GCSHLCLIKAGGQGYSCECPDNFMIVQFGNTAHCLPMCSSTQFLCADTE 3493
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+CIP WKCDG DC DGSDEP TC H+ C GQ QC PH +LC+ + DC
Sbjct: 3494 RCIPIWWKCDGQRDC-RDGSDEPPTCPHRYCPVGQFQCNDGNCTSPH-FLCNTQPDCH-- 3549
Query: 275 DIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED HQC Q QCA +K+CIP W CD E DC DN+DED
Sbjct: 3550 ---DRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG-----DNSDEDSTHC 3600
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C P + +C + +C+ CD DC + DE
Sbjct: 3601 ASRT---CPPGQFKC-DNGRCIPQYWKCDVDDDCGDNSDE 3636
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 147/372 (39%), Gaps = 72/372 (19%)
Query: 163 VLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C P + RC +++C+ L CDG DC + DE ECT ++ C +CIP
Sbjct: 3687 MTCSPYGDFRC-DNHRCIPLRWKCDGDNDCGDNSDEHNCSPRECTESEYRCDNLRCIPSR 3745
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC ED SDE + + C G QC S C+ + CD DC +D +D
Sbjct: 3746 WICDHDDDC-EDNSDERDCELRTCHPGYFQCD-SGHCVAERFRCDGNADC-----LDFSD 3798
Query: 282 ED----------------------------W-------------DKFHQCFNGQVQCAL- 299
E W ++ H C + +
Sbjct: 3799 ETTCPTRYPNGTYCPPMLFECKNHVCIQPYWKCDGDNDCGDDSDEELHLCLDIACESPFR 3858
Query: 300 ----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+ +CI + LC++E DC D +DE + C E +C + N C+
Sbjct: 3859 FRCENNRCIYSHELCNQEDDCG-----DGSDEKEEHCIEPTPRPCTTEEFKCSNGN-CIP 3912
Query: 356 LSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNP---NK 410
L CD DC + DE G C C H C+ G +C C G N+
Sbjct: 3913 LHYVCDNYDDCGDHFDEIGCNPGTARTCAENICEHNCTNLNEGGFICSCRPGYKASETNR 3972
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIF 468
C D +EC I G+C Q C N+ SY C C +G+ D GK C A P ++
Sbjct: 3973 NSCDDINECEIFGTCTQDCKNSKGSYECFCADGFRSVGDQQGKQCAA----NGNPPLLLL 4028
Query: 469 SSTVDIRRIHLN 480
V IRR +++
Sbjct: 4029 PDNVRIRRYNIS 4040
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 90/194 (46%), Gaps = 39/194 (20%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQF CG G+CIP W+CDG DC +D +DE C Q QC +CIP +W+
Sbjct: 1 CERGQFRCGNGRCIPADWRCDGARDCSDD-TDEAGCPQPTCEGNQFQCKTDGECIPQSWV 59
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD+E DC D +DE C + Q C+ + +CIP + CD DC+ D
Sbjct: 60 CDDEEDCE-----DGSDEHQQCPGRTCSSQQFTCS-NGQCIPSAYWCDRVKDCT-----D 108
Query: 324 NTDEDWDKYFSHNAVLCHP---NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
TDE +CH +L C ++ C S+ CDGK DC + DE
Sbjct: 109 GTDER----------VCHYPRCEQLSC-ANGACFNASQRCDGKVDCRDSSDEA------- 150
Query: 381 DCENLKCSHKCSPT 394
C+H C+ T
Sbjct: 151 -----NCTHGCTNT 159
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 101/221 (45%), Gaps = 37/221 (16%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P L+CGS + +CV CDG DC + DE N C F+C G+CI
Sbjct: 991 PPTLQCGSYSFSCNNGRCVPQYYQCDGVDDCHDNSDEQNCGSLNNTCASSAFTCASGQCI 1050
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCS 272
P W+CD DC DGSDE +H G C + ++CIP WLCD + DC
Sbjct: 1051 PGRWRCDKHNDCF-DGSDE----LHCPTQGPTSCPATLFTCDNRRCIPRIWLCDTDNDCG 1105
Query: 273 TDDIVDNTDEDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE F C Q QC +CI ++CD + DC +D DE D
Sbjct: 1106 -----DGSDEKNCTFAGTCEPRQFQCP-DHRCIDPFYVCDGDKDC-----IDGADER-DC 1153
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E +C S +QC++ CDG DC++ DE
Sbjct: 1154 IYN-----CSATEFKCLSGDQCISTYYRCDGVFDCNDHSDE 1189
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 94/202 (46%), Gaps = 15/202 (7%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
QC++ CD DC +G DE A C P F+CG G+CIP ++CD + DC D
Sbjct: 2681 QCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCIPYHYRCDHYNDC-GDN 2739
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CI ++C+ +C + +DE C +G
Sbjct: 2740 SDEVGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYDN---GTSDERNCPDRTCQSGF 2796
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP +LCD + DC D +DE S + C +E RC +S +C+
Sbjct: 2797 TKCQSTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---LTCTNSEFRC-TSGRCI 2847
Query: 355 ALSKFCDGKPDCSNGEDEGPFC 376
+CD DC++G DE C
Sbjct: 2848 PAHWYCDQGIDCADGSDEPASC 2869
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C + C G C CIP ++ CDG DC
Sbjct: 2759 NNGRCISLQYVCNGVNNCYDNGTSDERNCPDRTCQSGFTKCQSTNICIPRTYLCDGDNDC 2818
Query: 231 LEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---K 286
+ + P C+ C N + +C S +CIP +W CD+ +DC+ D +DE +
Sbjct: 2819 GDMSDESPTHCVSLTCTNSEFRCT-SGRCIPAHWYCDQGIDCA-----DGSDEPASCVPQ 2872
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNE 344
C + Q +C +CIP W+CD + DC D +DED HN C E
Sbjct: 2873 VRTCSSDQFRCD-DGRCIPATWICDGDNDCG-----DMSDEDQ----RHNCANRNCTAAE 2922
Query: 345 LRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C ++ +C+ + CDG DCS+ DE C ++
Sbjct: 2923 FTCANNRPPLRRCIPRAWVCDGDADCSDAFDEHQNCTRRS 2962
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 78/154 (50%), Gaps = 13/154 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C + RCG+ +C+ CDG DCS+ DE C QF C G+CIP+SW
Sbjct: 1 CERGQFRCGNG-RCIPADWRCDGARDCSDDTDEAGCPQPTCEGNQFQCKTDGECIPQSWV 59
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC EDGSDE C + C + Q C+ + +CIP + CD DC+ D TDE
Sbjct: 60 CDDEEDC-EDGSDEHQQCPGRTCSSQQFTCS-NGQCIPSAYWCDRVKDCT-----DGTDE 112
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ +C Q+ CA + C + CD ++DC
Sbjct: 113 RVCHYPRC--EQLSCA-NGACFNASQRCDGKVDC 143
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 135/363 (37%), Gaps = 103/363 (28%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R+P+V+ N+ WP+ L +DY + LYW D++L +E + G++ V+
Sbjct: 2499 NAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCTLTGTNREVI 2558
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKFCDGKPD--------- 190
HP + + S+Q V + D
Sbjct: 2559 VSTALHPFAMTLFDQHIYWTDWNTRSIYRANKYDGSDQIVMIMNLPRRPMDIHVWAKSKQ 2618
Query: 191 --CSNGEDE-GPFCNAECTPGQFSCGMGKCIPES--WKCDGFVDCLEDGSDEPNTCIHQC 245
C+N ++ C+ C PG + +C E + + C+ D +T C
Sbjct: 2619 QQCTNPCNQFNGGCSHICAPGP-AGAECQCPSEGRWYLANNNKHCIVDNGTRCDTGFFTC 2677
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKC 303
NGQ CI W CD + DC D +DE FH C C + +C
Sbjct: 2678 LNGQ--------CISERWKCDNDNDCG-----DGSDELESVCAFHTCQPTAFTCG-NGRC 2723
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDE--------DWDKYFSHNA------------------ 337
IP+++ CD DC DN+DE D F+ N
Sbjct: 2724 IPYHYRCDHYNDCG-----DNSDEVGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYD 2778
Query: 338 -----------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
C +C S+N C+ + CDG DC + DE P C +L
Sbjct: 2779 NGTSDERNCPDRTCQSGFTKCQSTNICIPRTYLCDGDNDCGDMSDESP-----THCVSLT 2833
Query: 387 CSH 389
C++
Sbjct: 2834 CTN 2836
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++++ WP+ L IDY N D +YW DS N +ES+R DG+ V+
Sbjct: 4179 KIECAWMDGQQRQALVSEDLGWPTGLSIDYLNNDRIYWSDSKENIIESMRPDGTDRTVVL 4238
Query: 166 H 166
H
Sbjct: 4239 H 4239
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR L+ + WP+ + +D LYW DS + +E+V DG +
Sbjct: 505 DPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYWVDSRFDYIETVTYDGLQRRTI 564
Query: 165 CHPNEL 170
H L
Sbjct: 565 AHGGSL 570
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 116/297 (39%), Gaps = 73/297 (24%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C N + +C S +CIP +W CD+ +DC+ D +DE
Sbjct: 2834 CTNSEFRCT-SGRCIPAHWYCDQGIDCA-----DGSDE---------------------- 2865
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMH------ 114
+ C Q + SS + RC + +W D ++ D+R A +
Sbjct: 2866 --PASCVPQVRTCSSDQFRCDDGRCIPATWICDGDNDCGDMSDEDQRHNCANRNCTAAEF 2923
Query: 115 --GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
NR PL + I P + V D + D D H N C NE C
Sbjct: 2924 TCANNRPPL-RRCI--PRAWVCDGDADCSDAFDEHQNCTRRS----------CTANEFTC 2970
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S+ C+ + CD + DC + DE C QF+C G+CI +++ CDG DC
Sbjct: 2971 -SNGLCIRNTYRCDRRNDCGDSSDERGCIYEPCQQHQFTCQNGRCISKAYICDGDNDC-- 3027
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE----EMDC---STDDIVDNTDE 282
DE + H C + C+ PH++ CD EM DD +DN+DE
Sbjct: 3028 --GDESDELEHLCTTPEATCS------PHHFKCDNGNCIEMVKVCNRLDDCLDNSDE 3076
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+EKA M G+ R+ ++ I WP+ L IDY +LY+ D++L+ ++ DG +
Sbjct: 1548 RIEKASMDGKMRTVIINNKIYWPNGLSIDYPNKLLYFADAYLDYIDFCDYDGNNRRQVLA 1607
Query: 160 HNAVLCHPNEL 170
+ +L HP+ L
Sbjct: 1608 SDLILQHPHAL 1618
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL------NGTHTLALEFNHRNQSL--CFIQQ 74
+ CD S+ + + D YF+ ++ NG +A+++ N F+ +
Sbjct: 2080 FWCDFSSTVSSQNAIRKIKPD-GSYFRNVVTNGIGRNGIRGIAIDWVAGNLYFTNAFLAE 2138
Query: 75 QNVSSVRLRCAQINDLL-NSWDLPAPEI------------FPLDERLEKAGMHGENRSPL 121
+ +RL LL + D+P + + + ++E+A + NR+ L
Sbjct: 2139 TFIEVLRLNTTYRRVLLKTTIDMPRHIVVDPKTRYLFWADYGQNPKIERAFLDCTNRTVL 2198
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
V++ I P L ID++ +YW D L+ + ++ DG ++
Sbjct: 2199 VSEGIVTPRGLAIDHSNGYIYWVDDSLDMIARIQPDGGEVEIV 2241
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + A Q + C + G C+Q C +H
Sbjct: 598 NKFSESNPQVIYQSSLRPYGVTVYHAARQPYVRNPCGSNN-----GGCEQICVLSHKTDN 652
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C CT G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 653 DGLGYRCRCTLGFDLHVDGRHCVAVQ------QFLLFSSQMAVRGIPFNLS 697
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++++ A +G +R + + S+ +D+ LYW D L T+E ++DGSH VL
Sbjct: 1457 EDKIWSAYQNGTDRKIVFDSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVL 1516
Query: 165 CHPN 168
N
Sbjct: 1517 ISEN 1520
>gi|312069818|ref|XP_003137859.1| hypothetical protein LOAG_02273 [Loa loa]
Length = 4145
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 151/310 (48%), Gaps = 26/310 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ CG+ +C+ + CDG DC + DE +A C P QF C + CI
Sbjct: 589 CSTNQFTCGNG-RCIPVYWLCDGDNDCYDNTDEDKERCPSALCRPDQFRCNNKRQCISLK 647
Query: 222 WKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC +DGSDE + + I +C + + CA CIP W CD + DC D
Sbjct: 648 NHCDGQQDC-DDGSDEESCLSQIDKCTHNEFTCASDGLCIPIAWKCDGQKDCE-----DG 701
Query: 280 TDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN- 336
+DE QC +CA + +CI + WLCD E DC DN+DED + +
Sbjct: 702 SDEPESLCSSVQCTQDHFKCA-NGRCIFNTWLCDGENDCG-----DNSDEDVEHGCQRSQ 755
Query: 337 --AVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCS 392
AV C + C G+ + C+ L CDGK C DEG C + C+ KC
Sbjct: 756 LLAVRCPFEHVACPGAPDICIPLHNLCDGKDHCPGNTDEGGRCARDLCAADRAACAFKCH 815
Query: 393 PTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
+P G +C CP G+ NKT+C +ECL SC Q CT+ + CSC EGYTL D +
Sbjct: 816 MSPDGPLCSCPFGETLVNKTKCEPENECLDARSCSQICTDEKHGFTCSCEEGYTLDADKR 875
Query: 452 SCTAVNVPQD 461
+C + QD
Sbjct: 876 TCKVTDGVQD 885
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 114/230 (49%), Gaps = 41/230 (17%)
Query: 163 VLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE-GP-----FCNAECTPGQFSC-GM 214
+LC N + +N +C+ CDG+ DC +G DE GP F EC P C
Sbjct: 454 ILCASNSSQFLCANGRCIPNEWKCDGENDCLDGSDERGPDDKPCFVQKECPPNTIRCNNT 513
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ-CALSK------KCIPHNWLCDE 267
KCIP+ + CDG DC D SDE + C NG++ CA K +CIP W CD
Sbjct: 514 KKCIPQQYACDGDNDC-GDYSDED---VKYCKNGEIPVCAARKFQCDNHRCIPEQWKCDS 569
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFN-----GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE K C N Q C + +CIP WLCD + DC
Sbjct: 570 DNDCG-----DGSDE---KLEMCTNTTCSTNQFTCG-NGRCIPVYWLCDGDNDC-----Y 615
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DNTDED ++ S LC P++ RC + QC++L CDG+ DC +G DE
Sbjct: 616 DNTDEDKERCPS---ALCRPDQFRCNNKRQCISLKNHCDGQQDCDDGSDE 662
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 154/343 (44%), Gaps = 51/343 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC S +C+ +K CDG C++G DE EC G C G CIPE C
Sbjct: 3277 CSESEFRC-SDGRCIPGNKVCDGTVQCADGIDESQCKMRECNAGFMKCDDGTCIPEHRWC 3335
Query: 225 DGFVDCLEDGSDE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
D DC + SDE PN +C + +C S CIP ++CD + DC D
Sbjct: 3336 DRRRDC-PNASDESHCENHPNR--RECSPFEFECGNS-VCIPRKFICDGDNDCG-----D 3386
Query: 279 NTDEDWDKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
N+DE C N + +CA S+ C+ LC+ DC D++DE
Sbjct: 3387 NSDE---TNEHCKNAVCDPPLRFRCAHSRLCLNILQLCNGIDDCGP---FDHSDEHLSMC 3440
Query: 333 FSHNAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNNKADCEN 384
S + C N+ +C ++ +C+ S CD DC + DE G C + + EN
Sbjct: 3441 SSFSEYGDCTTNQFKC-TNGKCINASLACDHNDDCGDASDEIGCAKRRGITC--ETNNEN 3497
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
C H C+ G C C G PN C+D DEC + +C Q+C NT SY+C C
Sbjct: 3498 GNCKHLCTDVTNGYYCHCRDGFQPNPDDPYDCIDIDECTGNNTCTQSCLNTKGSYLCRCL 3557
Query: 442 EGY-----TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
E + GK C A + +P I+ ++ ++ +++L
Sbjct: 3558 EDFENNVVVGAMTGKDCRA----KGDPPLIMVAADGEVVQLNL 3596
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 148/342 (43%), Gaps = 52/342 (15%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCI 218
+CG+ +C++ + CDG+ DC + DE N CT +F C +CI
Sbjct: 2411 FQCGNG-KCISRAFICDGEDDCGDASDESIIHNCGNRTCTDQEFHCKSNVHLTQPKYECI 2469
Query: 219 PESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
P++W CDG V C + C C G+ +CA +K C+ +W CD + DC
Sbjct: 2470 PKAWLCDGDVTCANGEDESKELCGVEKKDCNKGEFRCA-NKHCVRASWECDGDNDC---- 2524
Query: 276 IVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNW---------LCDEEMDCSTDDIVDNT 325
+D +DE + + QC QCA + KCIP++W +E +C+ D
Sbjct: 2525 -LDGSDEHANCTYSQCQPEFWQCA-NNKCIPNSWKCDGNDDCDDGSDEKECANKSGSDLM 2582
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCE 383
A C + RC + +C+ +K CD DC + DE F N E
Sbjct: 2583 -----------ASGCPAGQFRC-RNGECIVTAKVCDRVYDCLDRSDESSKCFINECIVAE 2630
Query: 384 NLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLID-GSCDQTCTNTHLSYVCS 439
C KC P C C G +K C D DEC G C Q C N SY C
Sbjct: 2631 KPLCEQKCVDLPIDYRCDCFDGFALDMDDKKSCHDIDECETGLGRCSQKCENKVGSYKCW 2690
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C +GY + D ++C V+ D ++F++ +R++ L+G
Sbjct: 2691 CVDGYAILSDDRTCKRVST--DPEPWLLFANKHYVRKLTLDG 2730
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAE---CTPGQFSCGMGKCIP 219
C PN +RC ++ +C+ CDG DC + DE +C N E C +F C +CIP
Sbjct: 503 CPPNTIRCNNTKKCIPQQYACDGDNDCGDYSDEDVKYCKNGEIPVCAARKFQCDNHRCIP 562
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
E WKCD DC DGSDE C + C Q C + +CIP WLCD + DC
Sbjct: 563 EQWKCDSDNDC-GDGSDEKLEMCTNTTCSTNQFTCG-NGRCIPVYWLCDGDNDC-----Y 615
Query: 278 DNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DNTDED ++ C Q +C ++CI CD + DC ++ DK
Sbjct: 616 DNTDEDKERCPSALCRPDQFRCNNKRQCISLKNHCDGQQDCDDGSDEESCLSQIDK---- 671
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C NE C S C+ ++ CDG+ DC +G DE
Sbjct: 672 ----CTHNEFTCASDGLCIPIAWKCDGQKDCEDGSDE 704
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAE--CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE N E CT +F C KCIP+
Sbjct: 3108 CDPWMFKCAATGKCIPKRFICDGDDDCGDRSDETDVICKNKERNCTAEEFRCSNHKCIPK 3167
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3168 MWKCDNDDDCGDGSDEPPECTSIECRKGWTRCSTSYRCIPNWAFCNGQDDCR-----DNS 3222
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE D+ C + G+ +CA S KCIP W+CD E DC D++DE D +
Sbjct: 3223 DEIIDRCPACDDIGEFRCATSGKCIPKRWMCDSENDCG-----DDSDET-DVSCGGTSRP 3276
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC S +C+ +K CDG C++G DE
Sbjct: 3277 CSESEFRC-SDGRCIPGNKVCDGTVQCADGIDE 3308
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C +RC ++N C+ + CDG DC + DE FC N C C G+CIPE+W
Sbjct: 2317 CRGVRIRCPNTNICIQPADLCDGYDDCGDKADENKLFCMNQPCAMHYVRCPSGRCIPETW 2376
Query: 223 KCDGFVDCLEDGSDEPNT--------------CIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CDG DC E DE +T + QC NG KCI ++CD E
Sbjct: 2377 QCDGDNDCGESAWDENHTNCTDSAGRRICLGEYLFQCGNG--------KCISRAFICDGE 2428
Query: 269 MDC---STDDIVDN------TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
DC S + I+ N TD++ FH C + +CIP WLCD ++ C+
Sbjct: 2429 DDCGDASDESIIHNCGNRTCTDQE---FH-CKSNVHLTQPKYECIPKAWLCDGDVTCA-- 2482
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
N +++ + C+ E RC ++ CV S CDG DC +G DE C
Sbjct: 2483 ----NGEDESKELCGVEKKDCNKGEFRC-ANKHCVRASWECDGDNDCLDGSDEHANC 2534
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGM-GK 216
++ C RC +S +C+ FC+G+ DC + DE P C+ G+F C GK
Sbjct: 3189 SIECRKGWTRCSTSYRCIPNWAFCNGQDDCRDNSDEIIDRCPACD---DIGEFRCATSGK 3245
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP+ W CD DC +D + +C C + +C+ +CIP N +CD + C+
Sbjct: 3246 CIPKRWMCDSENDCGDDSDETDVSCGGTSRPCSESEFRCS-DGRCIPGNKVCDGTVQCA- 3303
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D DE K +C G ++C CIP + CD DC N ++
Sbjct: 3304 ----DGIDESQCKMRECNAGFMKCD-DGTCIPEHRWCDRRRDCP------NASDESHCEN 3352
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C P E CG+S C+ CDG DC + DE
Sbjct: 3353 HPNRRECSPFEFECGNS-VCIPRKFICDGDNDCGDNSDE 3390
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQ-FSCGMGKCIPESWKC 224
P +CG + C+ALS C+GK DC++G DE +CN P Q F C +CI +C
Sbjct: 2192 PYNFQCGDGS-CIALSATCNGKQDCTDGSDEHSAYCNTRVCPEQYFLCSNRRCIDADRQC 2250
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ DC D SDE + C +G +C+ + CI +CD DC + + D E
Sbjct: 2251 NNVDDC-GDNSDELDCTATSSACPSGHFECS-NGHCINSTKVCDGHNDCHDEKVSDENKE 2308
Query: 283 D-WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
D C +++C + CI LCD DC D DE +K F N C
Sbjct: 2309 TCPDLPIDCRGVRIRCPNTNICIQPADLCDGYDDCG-----DKADE--NKLFCMNQP-CA 2360
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCS 367
+ +RC S +C+ + CDG DC
Sbjct: 2361 MHYVRC-PSGRCIPETWQCDGDNDCG 2385
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 107/254 (42%), Gaps = 60/254 (23%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKC 217
C + CG + +C+ +CDG+PDC +G DE GP C G+F C C
Sbjct: 3026 CTDRQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGKDICGPRI---CVVGEFQCNNHNC 3082
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC-----S 272
CDG DC DGSDE C C +CA + KCIP ++CD + DC
Sbjct: 3083 TRPFQLCDGNDDC-GDGSDEVE-CDKPCDPWMFKCAATGKCIPKRFICDGDDDCGDRSDE 3140
Query: 273 TDDIVDNTDED--WDKFH--------------------------------QCFNGQVQCA 298
TD I N + + ++F +C G +C+
Sbjct: 3141 TDVICKNKERNCTAEEFRCSNHKCIPKMWKCDNDDDCGDGSDEPPECTSIECRKGWTRCS 3200
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S +CIP+ C+ + DC DN+DE D+ + + + E RC +S +C+
Sbjct: 3201 TSYRCIPNWAFCNGQDDCR-----DNSDEIIDRCPACDDI----GEFRCATSGKCIPKRW 3251
Query: 359 FCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 3252 MCDSENDCGDDSDE 3265
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 150/381 (39%), Gaps = 91/381 (23%)
Query: 95 DLPAPEIFPLDERLEKAG---MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A ++F D L + G ++G R + K SS+ + D L+W D +L
Sbjct: 2889 DFFADKLFWADAHLNEIGFMDLNGGTRHHIPAKRTSHISSMTV--FDDYLFWSDWNLR-- 2944
Query: 152 ESVRVD---GSHNAVLC----HPNELR-------------CGSSN----QCVALSKFCDG 187
E +R D G + VL P+++R CG N LS + G
Sbjct: 2945 EIIRADKWTGMNETVLKVTTQLPSDIRVIHPFRQPKYKNPCGDDNGGCSHLCLLSAYDPG 3004
Query: 188 K----PDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPESWKCDGFVDCLEDGSDEPNTC 241
PD + C +CT QF+CG KCIP+ W CDG DC DGSDEP
Sbjct: 3005 FTCSCPDQFVLLTDNKTCEPQCTDRQFACGGDDAKCIPKLWYCDGEPDC-RDGSDEPGKD 3063
Query: 242 I---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQC 297
I C G+ QC + C LCD DC D +DE + DK C +C
Sbjct: 3064 ICGPRICVVGEFQCN-NHNCTRPFQLCDGNDDCG-----DGSDEVECDK--PCDPWMFKC 3115
Query: 298 ALSKKCIPHNWLC------------------DEEMDCSTDDIVDNTDEDWDKYFSH---- 335
A + KCIP ++C ++E +C+ ++ + + K +
Sbjct: 3116 AATGKCIPKRFICDGDDDCGDRSDETDVICKNKERNCTAEEFRCSNHKCIPKMWKCDNDD 3175
Query: 336 ------------NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNNK 379
++ C RC +S +C+ FC+G+ DC + DE P C+
Sbjct: 3176 DCGDGSDEPPECTSIECRKGWTRCSTSYRCIPNWAFCNGQDDCRDNSDEIIDRCPACD-- 3233
Query: 380 ADCENLKCSHKCSPTPRGAMC 400
D +C+ P+ MC
Sbjct: 3234 -DIGEFRCATSGKCIPKRWMC 3253
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWL 264
P F CG G CI S C+G DC DGSDE + C + Q +++CI +
Sbjct: 2191 APYNFQCGDGSCIALSATCNGKQDC-TDGSDEHSAYCNTRVCPEQYFLCSNRRCIDADRQ 2249
Query: 265 CDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C+ DC DN+DE C +G +C+ + CI +CD DC + +
Sbjct: 2250 CNNVDDCG-----DNSDELDCTATSSACPSGHFECS-NGHCINSTKVCDGHNDCHDEKVS 2303
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D E + C +RC ++N C+ + CDG DC + DE NK C
Sbjct: 2304 DENKETCPDL----PIDCRGVRIRCPNTNICIQPADLCDGYDDCGDKADE-----NKLFC 2354
Query: 383 ENLKCSHKCSPTPRG 397
N C+ P G
Sbjct: 2355 MNQPCAMHYVRCPSG 2369
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R LV I WP+++ +D + LY+ DS L+ ++ + DG S
Sbjct: 1025 RIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLDYIDFINYDGTGRTQVLS 1084
Query: 160 HNAVLCHPNEL 170
+ HP+ L
Sbjct: 1085 STKFVQHPHSL 1095
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+++A + G +R +V +NI P+ L++D N ++YW D+ L+ + VR DG
Sbjct: 1674 IQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGIYRVRADGG 1725
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQ---SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
D DK ++ +G + + ++RN+ S F++ + R+ N + +WD
Sbjct: 871 DADKRTCKVTDGVQDMRIYVSNRNRIYWSDRFLENWHTFEARVE----NAIALAWDSVED 926
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
++ D R +K A +G N + +++ + + +D+ LYW DS LNT+E +
Sbjct: 927 RVYWSDIREKKIYSATRNGTNVTVFISEGLDVTEGIALDWVARNLYWVDSSLNTIEVASL 986
Query: 157 DG-SHNAVLCHPN 168
+ AVL H N
Sbjct: 987 ERPGARAVLIHEN 999
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNA 162
D ++E A M G++R ++ I P+SL +D +D +YW D VESV DG+
Sbjct: 3750 FDAKIECADMDGKHRDVIIKDLIYSPTSLTVDEGKDNRIYWADPKYRKVESVLPDGTRRT 3809
Query: 163 VLCHPNEL 170
+ N +
Sbjct: 3810 TVIVNNRM 3817
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+A M G +R ++ + + P++L ID + LYW D + +ES DG +
Sbjct: 2002 RIERANMAGGDRHIVLKEGVSLPAALAIDLREQRLYWADINKLNIESSDYDGKSRRTV 2059
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E + G++R L++ + PSSL +D LYW D +++ +DGSH V+ H
Sbjct: 1630 IEVCQLDGKHRKILLSTKTETPSSLAVDPVGRYLYWADQGQKPSIQRAFLDGSHRQVIVH 1689
Query: 167 PN 168
N
Sbjct: 1690 EN 1691
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNA-----ECTPGQFSC 212
NAV P RC S C+ + + C+G DC + ++ C++ +CT QF C
Sbjct: 3397 NAVCDPPLRFRCAHSRLCLNILQLCNGIDDCGPFDHSDEHLSMCSSFSEYGDCTTNQFKC 3456
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDE 237
GKCI S CD DC D SDE
Sbjct: 3457 TNGKCINASLACDHNDDC-GDASDE 3480
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
L ++ WP++L ID+ D L+W D+HLN + + ++G
Sbjct: 2875 LAENDLGWPNALAIDFFADKLFWADAHLNEIGFMDLNGG 2913
>gi|45382557|ref|NP_990573.1| low-density lipoprotein receptor-related protein 1 precursor [Gallus
gallus]
gi|1708864|sp|P98157.1|LRP1_CHICK RecName: Full=Low-density lipoprotein receptor-related protein 1;
Short=LRP-1; AltName: Full=Alpha-2-macroglobulin
receptor; Short=A2MR; Flags: Precursor
gi|438007|emb|CAA52870.1| alpha-2-macroglobulin receptor [Gallus gallus]
Length = 4543
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIP W CDG DC +
Sbjct: 983 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDY 1041
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--W 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1042 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDC-----MDSSDEKNCE 1096
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + +++C P
Sbjct: 1097 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLVCKPP 1146
Query: 344 ELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C ++ C+ K CDG DC +G DEG C+ + N CSH C+ P G +C
Sbjct: 1147 SHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCD-QCSLNNGGCSHNCTVAPGEGIVCS 1205
Query: 402 CPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
CP G NKT C C C Q C + CSC EG+ L PDG+SC +++
Sbjct: 1206 CPLGMELGADNKT-CQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDP 1264
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1265 FK---PFIIFSNRHEIRRIDLH 1283
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE D C PNE C
Sbjct: 29 CSPKQFACKDQITCISKGWRCDGEKDCP-----DGSDESPDICPQSKVSRCQPNEHNCLG 83
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFC--PAGQ 406
+ C+ +SK C+G DC +G DEGP C + A+C L C H C PT G C+C
Sbjct: 84 TELCIHMSKLCNGLHDCFDGSDEGPHCREQLANCTALGCQHHCVPTLSGPACYCNNSFQL 143
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
++ C D DEC + G+C QTCTNT SY CSC EGY L+PD +SC A N P D P +
Sbjct: 144 AEDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVL 203
Query: 467 IFSSTVDIRRIHLNGS 482
+ +++ +I +L+G+
Sbjct: 204 LIANSQNILATYLSGA 219
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 164/367 (44%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C N C S +C+ ++ CD + DC NGEDE + C P QF C +CI +
Sbjct: 2690 CPANYFAC-PSGRCIPMTWTCDKEDDCENGEDETHCSERQDKFCYPVQFECNNHRCISKL 2748
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC DGSDE + C + C G QC + C+P WLCD + DC+ D
Sbjct: 2749 WVCDGADDC-GDGSDEDSRCRLTTCSTGSFQCPGTYVCVPERWLCDGDKDCA-----DGA 2802
Query: 281 DEDWDKF----HQCFNGQVQCALSKKCIPHNWLCD----------------------EEM 314
DE + C + C +++CIP +++CD E
Sbjct: 2803 DETLAAGCLYNNTCDEREFMCG-NRQCIPKHFVCDHDDDCGDGSDESPECEYPTCGPHEF 2861
Query: 315 DCSTDDIVDNTDEDWDKYFS-HNAVLCHPNELRCGS-------------SNQCVALSKFC 360
C+ + N+ + D F H+ P RC S + +C+ + C
Sbjct: 2862 RCANGRCLSNSQWECDGEFDCHDHSDEAPKNPRCSSPESKCNDSFFMCKNGKCIPEALLC 2921
Query: 361 DGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDA 416
D DC++G DE F N + + CS +C G C C G ++ KT C+D
Sbjct: 2922 DNNNDCADGSDELNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKDDGKT-CIDI 2980
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C NT SY C C EGY L+PD SC AV DE +IF++ +R
Sbjct: 2981 DECSTTYPCSQKCINTLGSYKCLCIEGYKLKPDNPTSCKAVT---DEEPFLIFANRYYLR 3037
Query: 476 RIHLNGS 482
+++L+GS
Sbjct: 3038 KLNLDGS 3044
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 142/337 (42%), Gaps = 75/337 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3533 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3591
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + CI +C Q QC + CIP W CD + DC +D TDE+
Sbjct: 3592 DGDHDC-ADGSDEKD-CIPRCEFDQYQCK-NGHCIPMRWRCDADADC-----MDGTDEED 3643
Query: 284 -WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C + QC + + P W CD E DC DN+DE+ ++ C P
Sbjct: 3644 CGTGVRTCPLDEFQCNNTLR-KPLAWKCDGEDDCG-----DNSDENPEECLKFQ---CPP 3694
Query: 343 NE-LRCGSSNQCVALSKFCDGKPDCSNGED----EGPFC--------NNKADCENLK--- 386
N RC + C+ + + CDG +C + D E P N+ CEN K
Sbjct: 3695 NRPFRCKNDRVCLWIGRQCDGIDNCGDNTDEKDCESPTAKPKSCSQDKNEFLCENKKCIS 3754
Query: 387 -------------------CSH------------------KCSPTPRGAMCFCPAG--QN 407
CSH +C C C G +
Sbjct: 3755 ANLRCNFFDDCGDGSDEKSCSHEHKSYDCMTNTTMCGDEAQCIQAQSSTYCTCRRGFQKV 3814
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
P+K C D +ECL G+C Q C NT S+VCSC + +
Sbjct: 3815 PDKNSCQDVNECLRFGTCSQLCNNTKGSHVCSCAKNF 3851
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3409 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPNQFQCAITKRCIPRVW 3468
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3469 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 3525
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 3526 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 3573
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C ++ +C+A CDG DC++G DE
Sbjct: 3574 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDE 3603
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 153/364 (42%), Gaps = 91/364 (25%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E+A M G NR+ +T K + WP+ L +D ILYW D+ + +E V ++G+ +
Sbjct: 680 KIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVY 739
Query: 164 ----------LCHPN------ELRCGS------SNQCVAL-------------------- 181
LCH + E R GS S++ V+L
Sbjct: 740 EGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQSSKAVSLLRNERPPIFEIRMYDAQQQQ 799
Query: 182 -------------SKFCDGKP---DCSNGEDE-----GPFCNA--------ECTPGQFSC 212
S C P C+ ED+ C A +C PG+F+C
Sbjct: 800 VGSNKCRVNNGGCSSLCLATPRGRQCACAEDQILGADSVTCEANPSYIPPPQCQPGEFAC 859
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC
Sbjct: 860 KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCK-NNRCIPNRWLCDGDNDC 918
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
++ N+ C Q CA S +CIP +W CD + DC D +DE
Sbjct: 919 GNNEDESNSTC---SARTCSPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASC 969
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHK 390
+ C P ++ +C+ ++ CD DC + DE C++ KC S +
Sbjct: 970 AYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGR 1024
Query: 391 CSPT 394
C P
Sbjct: 1025 CIPV 1028
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 157/449 (34%), Gaps = 151/449 (33%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D +
Sbjct: 3098 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALVVDVQNGYL 3156
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ K GM G NRS +V I WP+ L +DY
Sbjct: 3157 YWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFASLD 3216
Query: 137 --------NQDI------------LYWCDSHLNTVESV-RVDGSHNAVL----------- 164
+QDI +YW D ++ + G++ +L
Sbjct: 3217 GSNRHTVLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLHRPMDIH 3276
Query: 165 --------------CHPNELRC--------GSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C N C G ++C + F G +G C
Sbjct: 3277 IYHPYRQPDVPNHPCKTNNAGCSNLCLLSPGGGHKCACPTNFYLGS--------DGKTCV 3328
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDC-------------------------------- 230
+ CT QF C KCIP WKCD DC
Sbjct: 3329 SNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPEDCPEFKCRPGQFQCSTGICTNPAF 3388
Query: 231 -------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+D SDE N IH C Q +C + +CIP + C+ + +C D DE
Sbjct: 3389 ICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDEK 3443
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C Q QCA++K+CIP W+CD + DC VD +DE + + C +
Sbjct: 3444 DCPEVTCAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVD 3494
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E RC S +C+ CDG+ DC +G DE
Sbjct: 3495 EFRCKDSGRCIPARWKCDGEDDCGDGSDE 3523
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG-QFSCGMGKCIPESW 222
C P E C +N+C+ CDG DC + DE P C+ P +F C +CIP W
Sbjct: 852 CQPGEFAC-KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRW 910
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------- 272
CDG DC + + +TC C Q CA S +CIP +W CD + DC
Sbjct: 911 LCDGDNDCGNNEDESNSTCSARTCSPNQFSCA-SGRCIPISWTCDLDDDCGDRSDESASC 969
Query: 273 ---------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D DN+DE H C + Q +C S +CIP
Sbjct: 970 AYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA-GCSHSCSSNQFKCN-SGRCIP 1027
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D D T + + CH +E +C C+ + CDG D
Sbjct: 1028 VHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTD 1085
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSP 393
C + DE +CE + +H C P
Sbjct: 1086 CMDSSDE-------KNCEGV--THVCDP 1104
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 101/259 (38%), Gaps = 63/259 (24%)
Query: 168 NELRCGSSNQCVALSKFCDGKP-------------------------------------- 189
+E CG+ + C+ S+ CDG
Sbjct: 2522 DEFECGNGD-CIDFSRTCDGVVHCKDKSDEKQSYCSSRKCKKGFLHCMNGRCVASRFWCN 2580
Query: 190 ---DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
DC + DE P C +F C G CI S +C+ F+DC ED SDE N C
Sbjct: 2581 GVDDCGDNSDEVPCNKTSCAATEFRCRDGSCIGNSSRCNQFIDC-EDASDEMNCTATDCS 2639
Query: 246 --FNGQV------QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
F V +C + C +W+CD DC D D + + +C C
Sbjct: 2640 SYFKLGVKGTTFQKCEHTSLCYAPSWVCDGANDCG--DYSDERNCPGGRKPKCPANYFAC 2697
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S +CIP W CD+E DC + + E DK+ C+P + C ++++C++
Sbjct: 2698 P-SGRCIPMTWTCDKEDDCENGEDETHCSERQDKF-------CYPVQFEC-NNHRCISKL 2748
Query: 358 KFCDGKPDCSNGEDEGPFC 376
CDG DC +G DE C
Sbjct: 2749 WVCDGADDCGDGSDEDSRC 2767
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4024 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVV 4080
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2028 RIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEN 2082
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 349 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 406
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN----AECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C + C P + +C G CI
Sbjct: 29 CSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELCI 88
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFN 247
S C+G DC DGSDE C Q N
Sbjct: 89 HMSKLCNGLHDCF-DGSDEGPHCREQLAN 116
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE---------------RLEKAGMHGE 116
I + V RL + ++ P F LDE + +A + G
Sbjct: 2301 ITRHTVDQSRLGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRATLSGA 2360
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
N ++ ++I+ P+ L ID+ + +Y+ D+ L+ +E DGSH V+
Sbjct: 2361 NVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERCEYDGSHRHVI 2408
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-PEIFPLDERL 108
L H L++++ RN ++ ++ RL + N ++ D P + PL +L
Sbjct: 1655 LPNAHGLSVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLHGKL 1714
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G NR+ L T N + P L IDY + LYW S T+ +DGS
Sbjct: 1715 YWTDGDNISVANMDGSNRTLLFT-NQRGPVGLAIDYPESKLYWISSGNGTINRCNLDGSD 1773
Query: 161 NAVL 164
V+
Sbjct: 1774 LEVI 1777
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 3450 CAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDE 3482
>gi|347466437|gb|AEO97327.1| low density lipoprotein receptor [Oncorhynchus clarkii]
Length = 875
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 121/335 (36%), Positives = 155/335 (46%), Gaps = 42/335 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE RC S+ QC+A+S CD DCS+G DE A C P F C C+P W C
Sbjct: 114 CTDNEFRC-SNGQCIAVSFVCDKDNDCSDGSDETSCPTATCGPNAFQCNNTVCVPRLWAC 172
Query: 225 DGFVDCLEDGSDE-PNTC--------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
DG DC DGSDE P C C + C S +CI +W CD DC
Sbjct: 173 DGDADC-ADGSDEWPQNCGGRDTKPTTKPCGPHEFHCG-SGECIHRSWSCDGGKDCQ--- 227
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DN+DE C + QC CI + CD + DC D+ D D
Sbjct: 228 --DNSDETNCSRPTCQPDEFQCN-DGSCIHGSRQCDRQFDCR--DLSDEID-------CK 275
Query: 336 NAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCSHKC 391
+ C PN RC S +C+ + K C+GK DC + DE P NN+ N CSH C
Sbjct: 276 SVDACEGPNNFRC-KSGECITVDKVCNGKKDCRDMSDE-PIRECGNNECLTNNGGCSHTC 333
Query: 392 SPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
+ G C CPAG + K +C D DEC +C Q C N SY C C EGY L P
Sbjct: 334 TDLKIGFNCSCPAGYSLGKDNRKCEDIDECADPDTCTQICVNILGSYKCECEEGYELDPK 393
Query: 450 GKSCTAV--NVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A VP ++F++ ++R++ L+ S
Sbjct: 394 TKTCKAATGTVPY-----LLFTNRHEVRKMTLDRS 423
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 127/345 (36%), Gaps = 107/345 (31%)
Query: 205 CTPGQFSCGMGKCIPE-------------------------------------------S 221
C QF CG GKCI +
Sbjct: 32 CGTSQFRCGNGKCITSRWVCDGGDDCGDGTDELPAACEAKTCLPTEFSCGGPLNKCISGT 91
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CDG DC ++G+DE + C + + +C+ + +CI +++CD++ DCS D +D
Sbjct: 92 WHCDGKADC-DNGADEKSCAAKNCTDNEFRCS-NGQCIAVSFVCDKDNDCS-----DGSD 144
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-----DKYFSHN 336
E C QC + C+P W CD + DC+ D +DE W +
Sbjct: 145 ETSCPTATCGPNAFQCN-NTVCVPRLWACDGDADCA-----DGSDE-WPQNCGGRDTKPT 197
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCN-NKADCENLKCSHKC 391
C P+E CGS +C+ S CDG DC + DE P C ++ C + C H
Sbjct: 198 TKPCGPHEFHCGSG-ECIHRSWSCDGGKDCQDNSDETNCSRPTCQPDEFQCNDGSCIHGS 256
Query: 392 SPTPRGAMCF----------CPAGQNPNKTQCVDAD------------------------ 417
R C A + PN +C +
Sbjct: 257 RQCDRQFDCRDLSDEIDCKSVDACEGPNNFRCKSGECITVDKVCNGKKDCRDMSDEPIRE 316
Query: 418 ----ECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
ECL +G C TCT+ + + CSC GY+L D + C ++
Sbjct: 317 CGNNECLTNNGGCSHTCTDLKIGFNCSCPAGYSLGKDNRKCEDID 361
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++EK+G++G +R LVT NI+WP+ +D LYW DS ++T+ S+ V+G L
Sbjct: 545 EAKIEKSGLNGADRVALVTDNIKWPNGTTLDMVNQRLYWVDSKMHTLSSIGVNGEGRHTL 604
Query: 165 CH 166
+
Sbjct: 605 IY 606
>gi|449510118|ref|XP_004176584.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1-like [Taeniopygia guttata]
Length = 4182
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIP W CDG DC +
Sbjct: 946 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDY 1004
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--W 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1005 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDC-----MDSSDEKNCE 1059
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + +++C P
Sbjct: 1060 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLVCKPP 1109
Query: 344 ELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C ++ C+ K CDG DC +G DEG C+ + N CSH C+ P G +C
Sbjct: 1110 SHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCD-QCSLNNGGCSHNCTVAPGEGIVCS 1168
Query: 402 CPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
CP G NKT C C C Q C + CSC EG+ L PDG+SC +++
Sbjct: 1169 CPLGMELGADNKT-CQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDP 1227
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1228 FK---PFIIFSNRHEIRRIDLH 1246
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 88/146 (60%), Gaps = 3/146 (2%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGA 398
C PNE C + C+ +SK C+G DC +G DEGP C + A+C L C H C+PT G
Sbjct: 37 CQPNEHNCLGTELCIHMSKLCNGLHDCFDGSDEGPHCREQLANCSALGCQHHCAPTLSGP 96
Query: 399 MCFC--PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
+C+C ++ C D DEC + G+C QTCTNT SY CSC EGY L+PD +SC A
Sbjct: 97 VCYCNHSFQLAEDRRSCRDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAK 156
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D P ++ +++ +I +L+G+
Sbjct: 157 NEPVDRPPVLLIANSQNILATYLSGA 182
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 137/324 (42%), Gaps = 59/324 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C N C S +C+ ++ CD + DC NGEDE + C P QF C +CI +
Sbjct: 2653 CPSNYFAC-PSGRCIPMTWTCDKEDDCENGEDEMQCSERQDKFCYPVQFECNNHRCISKL 2711
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC DGSDE + C + C +G QC + C+P WLCD + DC+ D
Sbjct: 2712 WVCDGADDC-GDGSDEDSRCRLTTCSSGSFQCPGTYVCVPERWLCDGDKDCA-----DGA 2765
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCD----------------------EEMDCST 318
DE G +C + CIP +++CD E C
Sbjct: 2766 DETLAA------GCCECP-RRGCIPKHFVCDHDDDCGDGSDESPECEYPTCGPHEFRCQN 2818
Query: 319 DDIVDNTDEDWDKYFS-HNAVLCHPNELRCGS-------------SNQCVALSKFCDGKP 364
+ N + D F H+ P RC S + C++ + CD
Sbjct: 2819 GRCLSNRQGECDGEFDCHDHSDEAPKNTRCSSPENKCNDSFFLCKNGNCISEALLCDNNN 2878
Query: 365 DCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECL 420
DC++G DE F N + + CS +C G C C G ++ KT C+D DEC
Sbjct: 2879 DCADGSDELNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKDDGKT-CIDIDECS 2937
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGY 444
C Q C NT SY C CTEGY
Sbjct: 2938 TTYPCSQKCINTLGSYKCLCTEGY 2961
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 151/364 (41%), Gaps = 91/364 (25%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
++E+A M G NR+ +T K + WP+ L +D ILYW D+ + +E V ++G+
Sbjct: 643 KIERAWMDGSNRNIFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVY 702
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH + E R GS
Sbjct: 703 EGQELNHAFGLCHYSNFLFWTEYRSGSIYRLDQASKAVSLLRNERPPIFEIRMYDAQQQQ 762
Query: 175 --SNQCV----ALSKFCDGKP---DCSNGEDE-----GPFCNA--------ECTPGQFSC 212
SN+C S C P C+ ED+ C A +C PG+F+C
Sbjct: 763 VGSNKCRVNNGGCSSLCLATPRGRQCACAEDQMLGEDSVTCQANPSYIPPPQCQPGEFAC 822
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC
Sbjct: 823 KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCK-NNRCIPNRWLCDGDNDC 881
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
++ N+ C Q CA S +CIP +W CD + DC D +DE
Sbjct: 882 GNNEDESNSTC---SARTCSPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASC 932
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHK 390
+ C P ++ +C+ ++ CD DC + DE C++ KC S +
Sbjct: 933 AYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGR 987
Query: 391 CSPT 394
C P
Sbjct: 988 CIPV 991
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 146/349 (41%), Gaps = 89/349 (25%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNAECTPGQFSCGMGK 216
+C P++ +C ++N+C+ C+G+ +C +GEDE +A P G+
Sbjct: 3217 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDEKDCREWGAQGVSARPAPRASLVCHGR 3276
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CI WKCDG DC DGSDE + C +C Q +C + CIP W CD + DC
Sbjct: 3277 CIAGRWKCDGDHDC-ADGSDEKD-CTPRCEFDQFKCK-NGHCIPMRWRCDADADC----- 3328
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+D +DE+ C G C L + C P W CD E DC DN+DE+ +
Sbjct: 3329 MDGSDEE-----NCGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPE 3378
Query: 331 KYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------- 374
+ C PN RC + C+ + + CDG +C + DE
Sbjct: 3379 ECLKFQ---CPPNRPFRCKNDRVCLWIGRQCDGIDNCGDNTDEKDCESPTAKPKSCSQDK 3435
Query: 375 ---FCNNKA------------DC----ENLKCSHK------------------CSPTPRG 397
C NK DC + CSH+ C +
Sbjct: 3436 NEFLCGNKKCISANLRCNFFDDCGDGSDEESCSHEHKSYDCMTNSTMCGDEAHCVQSQST 3495
Query: 398 AMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+ C C G + P+K C D +ECL G+C Q C NT S+VCSC + +
Sbjct: 3496 SYCTCRRGFQKVPDKNFCQDINECLRFGTCSQLCNNTKGSHVCSCAKNF 3544
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG-QFSCGMGKCIPESW 222
C P E C +N+C+ CDG DC + DE P C+ P +F C +CIP W
Sbjct: 815 CQPGEFAC-KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRW 873
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------- 272
CDG DC + + +TC C Q CA S +CIP +W CD + DC
Sbjct: 874 LCDGDNDCGNNEDESNSTCSARTCSPNQFSCA-SGRCIPISWTCDLDDDCGDRSDESASC 932
Query: 273 ---------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D DN+DE H C + Q +C S +CIP
Sbjct: 933 AYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA-GCSHSCSSNQFKCN-SGRCIP 990
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D D T + + CH +E +C C+ + CDG D
Sbjct: 991 VHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTD 1048
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSP 393
C + DE +CE + +H C P
Sbjct: 1049 CMDSSDE-------KNCEGV--THVCDP 1067
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 114/272 (41%), Gaps = 29/272 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C L C + +CVA +CDG +C + DE P C +F C G CI S +C
Sbjct: 2523 CKKGYLHC-MNGRCVASRYWCDGVDNCGDNSDEVPCNKTSCAATEFRCRDGTCIGNSSRC 2581
Query: 225 DGFVDCLEDGSDEPNTCIHQC---FNGQV------QCALSKKCIPHNWLCDEEMDCSTDD 275
+ F+DC ED SDE C F V +C + C +W+CD DC D
Sbjct: 2582 NQFIDC-EDASDEMTCTATDCSSYFRLGVKGTTFQKCEHTSLCYAPSWVCDGANDCG--D 2638
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D + + +C + C S +CIP W CD+E DC + E DK+
Sbjct: 2639 YSDERNCPGGRKPKCPSNYFACP-SGRCIPMTWTCDKEDDCENGEDEMQCSERQDKF--- 2694
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C+P + C ++++C++ CDG DC +G DE + C CS P
Sbjct: 2695 ----CYPVQFEC-NNHRCISKLWVCDGADDCGDGSDE------DSRCRLTTCSSGSFQCP 2743
Query: 396 RGAMCFCPAGQNPNKTQCVD-ADECLIDGSCD 426
+C C D ADE L G C+
Sbjct: 2744 GTYVCVPERWLCDGDKDCADGADETLAAGCCE 2775
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 151/370 (40%), Gaps = 65/370 (17%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D I+ D R +E A + G NR +++++I P + +D +YW D
Sbjct: 3000 TLDYINSRIYWADAREDYIEFASLDGSNRHTVLSQDI--PHIFALTLFEDFIYWTDWETK 3057
Query: 150 TVESV-RVDGSHNAVLC----------------------HPNELRCGSSNQCVALSKFCD 186
++ + G++ +L HP + G + LS
Sbjct: 3058 SINRAHKTTGANKTLLISTLHRPMDIHIYHPYRQPDVPNHPCKTNNGGCSNLCLLSPGGG 3117
Query: 187 GKPDCSNG---EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
K C +G C + CT QF C KCIP WKCD DC D SDEP C
Sbjct: 3118 HKCACPTNFYLGSDGKTCVSNCTASQFVCKNDKCIPFWWKCDTEDDC-GDRSDEPEDCPE 3176
Query: 244 -QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
+C GQ QC+ + C ++CD + DC DN+DE H C Q +C + +
Sbjct: 3177 FKCRPGQFQCS-TGICTNPAFICDGDNDCQ-----DNSDEANCDIHVCLPSQFKCTNTNR 3230
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP---NELRCGSSNQCVALSKF 359
CIP + C+ + +C D DE + + V P L C +C+A
Sbjct: 3231 CIPGIFRCNGQDNCG-----DGEDEKDCREWGAQGVSARPAPRASLVC--HGRCIAGRWK 3283
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC 419
CDG DC++G DE C + + + KC + C P + +C DAD
Sbjct: 3284 CDGDHDCADGSDEKD-CTPRCEFDQFKC--------KNGHCI------PMRWRC-DADAD 3327
Query: 420 LIDGSCDQTC 429
+DGS ++ C
Sbjct: 3328 CMDGSDEENC 3337
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3717 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVV 3773
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ K GM G NRS +V I WP+ L +DY +YW D+ + +E +DGS+ +
Sbjct: 2975 IGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFASLDGSNRHTV 3031
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 13/167 (7%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCD 266
+F CG G+CI S CDG V C +D SDE + +C G + C ++ +C+ + CD
Sbjct: 2486 EFECGNGECIDFSRTCDGVVHC-KDKSDEKQSYCSSRKCKKGYLHC-MNGRCVASRYWCD 2543
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNT 325
D+ DN+DE C + +C CI ++ C++ +DC D + T
Sbjct: 2544 -----GVDNCGDNSDEVPCNKTSCAATEFRCR-DGTCIGNSSRCNQFIDCEDASDEMTCT 2597
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF +C ++ C A S CDG DC + DE
Sbjct: 2598 ATDCSSYFRLGVK--GTTFQKCEHTSLCYAPSWVCDGANDCGDYSDE 2642
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 1991 RIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEN 2045
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 312 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 369
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE---------------RLEKAGMHGE 116
I + V R+ + ++ P F LDE + +A + G
Sbjct: 2264 ITRHTVDQSRVGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRATLSGA 2323
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
N ++ ++I+ P+ L ID+ + +Y+ D+ L+ +E DGSH V+
Sbjct: 2324 NVLIIIDQDIRTPNGLAIDHKAEKIYFSDATLDKIERCEYDGSHRHVI 2371
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
C PNE C + C+ +SK C+G DC +G DEGP C +
Sbjct: 37 CQPNEHNCLGTELCIHMSKLCNGLHDCFDGSDEGPHCREQ 76
>gi|426222344|ref|XP_004005354.1| PREDICTED: very low-density lipoprotein receptor [Ovis aries]
Length = 921
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/367 (32%), Positives = 167/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 161 CRINEISCGARSTQCIPVSWRCDGENDCDSGEDEENCGNITCSSDEFTCSSGRCISRNFM 220
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 221 CNGQDDC-SDGSDELDCASPTCGPHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 273
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 274 LEQCGRQPVIHTRCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 322
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 323 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 381
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN K DC N CSH C G C C AG + ++
Sbjct: 382 ISKVCNQKQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 441
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 442 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 497
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 498 DIRKIGL 504
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 165/399 (41%), Gaps = 94/399 (23%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+W T+ + +G A C ++ +C ++ +C+ L CDG DC++G DE
Sbjct: 59 FWVSDVHGTMFKLEEEGGRKA-KCEASQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCV 116
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKC 258
C F C G+C+P W+CDG DC EDGSDE P C + C ++ C A S +C
Sbjct: 117 KKTCAESDFVCNNGQCVPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQC 175
Query: 259 IPHNWLCDEEMDCST----------------------------------DDIVDNTDEDW 284
IP +W CD E DC + DD D +DE
Sbjct: 176 IPVSWRCDGENDCDSGEDEENCGNITCSSDEFTCSSGRCISRNFMCNGQDDCSDGSDELD 235
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHP 342
C + QC+ S CIP +W+CD++ DCS D +DE ++ + C
Sbjct: 236 CASPTCGPHEFQCSTS-SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTRCPA 289
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT 394
+E++CGS +C+ CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 290 SEIQCGSG-ECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGI 348
Query: 395 ------------PRGAMCFCPAGQNPNKTQCVD-----------------------ADEC 419
C P +C+D +EC
Sbjct: 349 RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQKQDCRDWSDEPLKECHVNEC 408
Query: 420 LI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
L+ +G C C + + Y C C G+ L D K+C ++
Sbjct: 409 LVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDID 446
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++ + +S L + L NS DL P +D
Sbjct: 565 AIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DLREPASIAVDPLSGFVYWSDW 623
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R LVT +IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 624 GEPAKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRR 683
Query: 163 VLCHPNEL 170
++ E
Sbjct: 684 IVLRSLEF 691
>gi|260827336|ref|XP_002608621.1| hypothetical protein BRAFLDRAFT_183747 [Branchiostoma floridae]
gi|229293972|gb|EEN64631.1| hypothetical protein BRAFLDRAFT_183747 [Branchiostoma floridae]
Length = 1391
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/287 (35%), Positives = 145/287 (50%), Gaps = 29/287 (10%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
A C P ++ C G+CI E + CDG DC D SDE + C +G+ QC S CI
Sbjct: 3 ATCAPDEYRCDYGRCILEVYACDGDNDC-GDWSDEIACATRKPCRSGEFQCG-SGICINA 60
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD + DC D +DE C + Q +C S +CI +W CD E DC
Sbjct: 61 AWQCDGDFDCD-----DQSDEKNCPTPSCASNQFRCQ-SGRCIRLSWRCDGEDDC----- 109
Query: 322 VDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DN+DE D + ++ +C P++ RC ++ +C+ K C+G +C + DE P
Sbjct: 110 FDNSDEVDCGEAALPSSFVCAPDQFRCNNT-RCIGSHKLCNGVDNCGDNSDEAPELQCSK 168
Query: 381 DCE-------NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTN 431
D N C HKCS C C G P+ C D DEC ++G+C Q C N
Sbjct: 169 DTSLCSCQDGNGGCEHKCSMMGSRIWCSCHEGYRLMPDGRTCADVDECQLEGTCSQMCHN 228
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
T S+ CSC +GY L+PD K C A+ P+ A ++F++ +DIRR+H
Sbjct: 229 TIGSFQCSCVKGYELKPDKKGCKALG-PE---AWLLFANRIDIRRMH 271
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ L ++E+AGM G R P+VTKN+ WP+ L ID L+W D+ L T+E +DG++
Sbjct: 694 WGLSPKIERAGMDGSERQPIVTKNLTWPNGLAIDSELGRLFWVDAGLKTIEFSSLDGTNR 753
Query: 162 AVL 164
VL
Sbjct: 754 QVL 756
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 18/126 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E +CGS C+ + CDG DC + DE C QF C G+CI SW+C
Sbjct: 45 CRSGEFQCGSG-ICINAAWQCDGDFDCDDQSDEKNCPTPSCASNQFRCQSGRCIRLSWRC 103
Query: 225 DGFVDCLEDGSDE--------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DG DC D SDE P++ + C Q +C + +CI + LC+ +C
Sbjct: 104 DGEDDCF-DNSDEVDCGEAALPSSFV--CAPDQFRCN-NTRCIGSHKLCNGVDNCG---- 155
Query: 277 VDNTDE 282
DN+DE
Sbjct: 156 -DNSDE 160
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+E+A M G +R LV+ N+ WP+ L ID L W D+ +ES ++G + VL
Sbjct: 1021 RVERANMDGTDRQVLVSTNLGWPNGLTIDKIAGRLIWADARTEIIESSDLNGKNRNVLVT 1080
Query: 166 ---HPNEL 170
HP L
Sbjct: 1081 SAPHPYGL 1088
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E AGM G R + N+ WP+ L +DY + LYW D+ + +E +DG+ +
Sbjct: 395 KIESAGMDGTVRGAVAKTNLFWPNGLTLDYATNKLYWADAKHHVIECANLDGTERKAV 452
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 40 TDEDWDKYFKRILNGTHT-------------LALEFNHRNQSLCFIQQQNVSSVRLRCAQ 86
TD DK + LNGT +A+++ +N + + RL +
Sbjct: 1236 TDVQLDKIRRANLNGTGMEDIVFRDLVTADGIAVDWIAKNLYWTDTGKNTIDVARLDGSS 1295
Query: 87 INDLLN-SWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLV 133
LLN S D P A +FP R+E+A + G R +V ++ WP+ +
Sbjct: 1296 RKTLLNNSLDEPRAITLFPRKGYLFWTDWGAYPRIERAQLDGTERRIIVDTDLGWPNGIT 1355
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
ID +YW D+HL+ +E+ +G + L
Sbjct: 1356 IDPINRRVYWVDAHLDRIETSDFNGRNRVQLV 1387
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 35/63 (55%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G + +V+ ++ P + +D+ + LYW DS +E +DGS+ V+
Sbjct: 307 DRIMRAYLNGSGMAEVVSTGLESPGGVAVDWVGNKLYWTDSGTARIEVSHLDGSYRKVVL 366
Query: 166 HPN 168
N
Sbjct: 367 WEN 369
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+R+E A + G+NR LV + + P ++ + Y+ +YW D VE +DG+ VL
Sbjct: 976 DRIEVADLDGKNRLVLVWEGLDSPRAIALHYDAGYMYWTDWGSTPRVERANMDGTDRQVL 1035
Query: 165 CHPN 168
N
Sbjct: 1036 VSTN 1039
>gi|189459160|gb|ACD99565.1| IP21817p [Drosophila melanogaster]
Length = 559
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 119/341 (34%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-----------FCNAEC-TPG 208
C +L CG + C+ CD DC + DE FCN P
Sbjct: 197 CETPQLNCGQYTFNKTYCIPPHYRCDMIEDCEDKSDEAQCTYRKCQHTDLFCNTPTGAPA 256
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+ + G C+P+ +CDG++DC G DE C Q +CA KCI C+
Sbjct: 257 EGARLTGPCVPKEKRCDGYLDC-RTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHR 315
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE F C + Q +C + CIP+N+ CD DC+ D +DE
Sbjct: 316 DDCG-----DNSDEQGCNFPPCHHAQFRCT-NALCIPYNFHCDGYHDCA-----DKSDE- 363
Query: 329 WDKYFSHNAVLCHPNELRC---GSSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+ A+ C N+ C G+S +C+ S+ CDGK DC +G DE C+ A C
Sbjct: 364 ----ANCTAIACPDNKHLCPRGGASGTPKCILKSQLCDGKRDCEDGSDEETNCS-IASCP 418
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
L C KC P+ G +C+C GQ+ P+ CVD DEC G CDQ CTNT SY C C
Sbjct: 419 ALSCEFKCGPSLTGGVCYCKPGQSLAPDNRTCVDLDECAEWGHCDQLCTNTLGSYTCQCA 478
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+GYTL D K C A P +IF+ I R+ +GS
Sbjct: 479 QGYTLINDSK-CIA---PDANNLQLIFAHDRAIMRMLPHGS 515
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 69/145 (47%), Gaps = 12/145 (8%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
CD +L+ + R + + V C ++ RC + +C+ + C+ + DC + DE
Sbjct: 272 CDGYLD-CRTGRDEVGCSGVACRLDQFRCANGLKCIDAALKCNHRDDCGDNSDEQGCNFP 330
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC-----ALSKKC 258
C QF C CIP ++ CDG+ DC D SDE N C + + C + + KC
Sbjct: 331 PCHHAQFRCTNALCIPYNFHCDGYHDC-ADKSDEANCTAIACPDNKHLCPRGGASGTPKC 389
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED 283
I + LCD + DC D +DE+
Sbjct: 390 ILKSQLCDGKRDCE-----DGSDEE 409
>gi|126723673|ref|NP_001075657.1| very low-density lipoprotein receptor precursor [Oryctolagus
cuniculus]
gi|547843|sp|P35953.1|VLDLR_RABIT RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|217753|dbj|BAA01874.1| VLDL receptor precursor [Oryctolagus cuniculus]
Length = 873
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCGNVTCSSDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C + G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 156/376 (41%), Gaps = 93/376 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C ++ +C+ CDG DC +G DE C F C G+CIP W+C
Sbjct: 33 CEASQFQC-TNGRCITQLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCIPNRWQC 91
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 92 DGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCG 150
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC+ S CIP +
Sbjct: 151 NVTCSSDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS-SCIPIS 209
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D +DE ++ + C +E++CG S +C+ CDG PD
Sbjct: 210 WVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPD 263
Query: 366 CSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAG 405
C +G DE C ++ +CE+ C H +C+ C P
Sbjct: 264 CKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGK 323
Query: 406 QNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCT 441
+C+D +ECL+ +G C C ++ + Y C C
Sbjct: 324 FKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCA 383
Query: 442 EGYTLRPDGKSCTAVN 457
G+ L D K+C ++
Sbjct: 384 AGFEL-IDRKTCGDID 398
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+C QF C G+CI + WKCDG DC+ DGSDE N C C + +CIP+
Sbjct: 31 TKCEASQFQCTNGRCITQLWKCDGDEDCV-DGSDEKNCVKKTCAESDFVCN-NGQCIPNR 88
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE ++ H C ++ C A S +CIP +W CD E DC +
Sbjct: 89 WQCDGDPDCE-----DGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSG 143
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C +E C SS +C++ + C+G+ DCS+G DE
Sbjct: 144 EDEENC----------GNVTCSSDEFTC-SSGRCISRNFVCNGQDDCSDGSDE 185
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASRTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|393909668|gb|EJD75544.1| CBR-LRP-1 protein [Loa loa]
Length = 4694
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 151/310 (48%), Gaps = 26/310 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ CG+ +C+ + CDG DC + DE +A C P QF C + CI
Sbjct: 1138 CSTNQFTCGNG-RCIPVYWLCDGDNDCYDNTDEDKERCPSALCRPDQFRCNNKRQCISLK 1196
Query: 222 WKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC +DGSDE + + I +C + + CA CIP W CD + DC D
Sbjct: 1197 NHCDGQQDC-DDGSDEESCLSQIDKCTHNEFTCASDGLCIPIAWKCDGQKDCE-----DG 1250
Query: 280 TDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN- 336
+DE QC +CA + +CI + WLCD E DC DN+DED + +
Sbjct: 1251 SDEPESLCSSVQCTQDHFKCA-NGRCIFNTWLCDGENDCG-----DNSDEDVEHGCQRSQ 1304
Query: 337 --AVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCS 392
AV C + C G+ + C+ L CDGK C DEG C + C+ KC
Sbjct: 1305 LLAVRCPFEHVACPGAPDICIPLHNLCDGKDHCPGNTDEGGRCARDLCAADRAACAFKCH 1364
Query: 393 PTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
+P G +C CP G+ NKT+C +ECL SC Q CT+ + CSC EGYTL D +
Sbjct: 1365 MSPDGPLCSCPFGETLVNKTKCEPENECLDARSCSQICTDEKHGFTCSCEEGYTLDADKR 1424
Query: 452 SCTAVNVPQD 461
+C + QD
Sbjct: 1425 TCKVTDGVQD 1434
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 152/357 (42%), Gaps = 80/357 (22%)
Query: 145 DSHLNTVE-----SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
DS ++ VE SV A C N+ RC + +C+ CDG DCS+GEDE
Sbjct: 11 DSPISPVEAPLPGSVSTSVHFGATGCSENDFRC-NDGKCIRFEWKCDGSGDCSDGEDEKN 69
Query: 200 FCNAECTPGQFSCGM-----GKCIPESWKCDGFVDCLE---------------------- 232
+ C Q+ C CIPE +CD DC +
Sbjct: 70 CPHPGCKSDQWQCDKYEWRSASCIPEYQRCDNITDCADGSDEVDCPAPSVSCNVNDGSVF 129
Query: 233 ----------------------DGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDE 267
D SDE ++C H CF Q +CA +CI +W+CD
Sbjct: 130 QCADGRQCFDIAKKCDGKYDCRDLSDEKDSCPHNHTACFQYQFRCADQSQCIQKSWVCDG 189
Query: 268 EMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DCS D +DE +F QC G+ QC +K+C P + CD DC DN+D
Sbjct: 190 SSDCS-----DGSDEPPTCEFKQCSGGEFQCK-NKRCQPRKFRCDYYDDCG-----DNSD 238
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
E+ + LC P + C S C+ +K CDGK DCS+G DE +N C +L
Sbjct: 239 EEGCGQY-----LCPPQQWNCPGSGHCIHKTKLCDGKNDCSDGADEKNCSSNL--CPSLG 291
Query: 387 CSHKCSPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
C C +P G +C CP G ++ C D +EC+ G CDQ C N + CSC
Sbjct: 292 CQAGCHSSPSGGVCTCPVGYKLDERFHRTCSDINECVEWGYCDQGCQNHRPGFTCSC 348
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 87/230 (37%), Positives = 114/230 (49%), Gaps = 41/230 (17%)
Query: 163 VLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE-GP-----FCNAECTPGQFSC-GM 214
+LC N + +N +C+ CDG+ DC +G DE GP F EC P C
Sbjct: 1003 ILCASNSSQFLCANGRCIPNEWKCDGENDCLDGSDERGPDDKPCFVQKECPPNTIRCNNT 1062
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ-CALSK------KCIPHNWLCDE 267
KCIP+ + CDG DC D SDE + C NG++ CA K +CIP W CD
Sbjct: 1063 KKCIPQQYACDGDNDC-GDYSDED---VKYCKNGEIPVCAARKFQCDNHRCIPEQWKCDS 1118
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFN-----GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ DC D +DE K C N Q C + +CIP WLCD + DC
Sbjct: 1119 DNDCG-----DGSDE---KLEMCTNTTCSTNQFTCG-NGRCIPVYWLCDGDNDC-----Y 1164
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DNTDED ++ S LC P++ RC + QC++L CDG+ DC +G DE
Sbjct: 1165 DNTDEDKERCPS---ALCRPDQFRCNNKRQCISLKNHCDGQQDCDDGSDE 1211
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 152/341 (44%), Gaps = 47/341 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC S +C+ +K CDG C++G DE EC G C G CIPE C
Sbjct: 3826 CSESEFRC-SDGRCIPGNKVCDGTVQCADGIDESQCKMRECNAGFMKCDDGTCIPEHRWC 3884
Query: 225 DGFVDCLEDGSDE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
D DC + SDE PN +C + +C S CIP ++CD + DC D
Sbjct: 3885 DRRRDC-PNASDESHCENHPNR--RECSPFEFECGNS-VCIPRKFICDGDNDCG-----D 3935
Query: 279 NTDEDWDKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
N+DE C N + +CA S+ C+ LC+ DC D++DE
Sbjct: 3936 NSDE---TNEHCKNAVCDPPLRFRCAHSRLCLNILQLCNGIDDCGP---FDHSDEHLSMC 3989
Query: 333 FSHNAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-----DCENLK 386
S + C N+ +C ++ +C+ S CD DC + DE + + EN
Sbjct: 3990 SSFSEYGDCTTNQFKC-TNGKCINASLACDHNDDCGDASDEIGCAKRRGITCETNNENGN 4048
Query: 387 CSHKCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C H C+ G C C G PN C+D DEC + +C Q+C NT SY+C C E
Sbjct: 4049 CKHLCTDVTNGYYCHCRDGFQPNPDDPYDCIDIDECTGNNTCTQSCLNTKGSYLCRCLED 4108
Query: 444 Y-----TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ GK C A + +P I+ ++ ++ +++L
Sbjct: 4109 FENNVVVGAMTGKDCRA----KGDPPLIMVAADGEVVQLNL 4145
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 148/342 (43%), Gaps = 52/342 (15%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCI 218
+CG+ +C++ + CDG+ DC + DE N CT +F C +CI
Sbjct: 2960 FQCGNG-KCISRAFICDGEDDCGDASDESIIHNCGNRTCTDQEFHCKSNVHLTQPKYECI 3018
Query: 219 PESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
P++W CDG V C + C C G+ +CA +K C+ +W CD + DC
Sbjct: 3019 PKAWLCDGDVTCANGEDESKELCGVEKKDCNKGEFRCA-NKHCVRASWECDGDNDC---- 3073
Query: 276 IVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNW---------LCDEEMDCSTDDIVDNT 325
+D +DE + + QC QCA + KCIP++W +E +C+ D
Sbjct: 3074 -LDGSDEHANCTYSQCQPEFWQCA-NNKCIPNSWKCDGNDDCDDGSDEKECANKSGSDLM 3131
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCE 383
A C + RC + +C+ +K CD DC + DE F N E
Sbjct: 3132 -----------ASGCPAGQFRC-RNGECIVTAKVCDRVYDCLDRSDESSKCFINECIVAE 3179
Query: 384 NLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLID-GSCDQTCTNTHLSYVCS 439
C KC P C C G +K C D DEC G C Q C N SY C
Sbjct: 3180 KPLCEQKCVDLPIDYRCDCFDGFALDMDDKKSCHDIDECETGLGRCSQKCENKVGSYKCW 3239
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C +GY + D ++C V+ D ++F++ +R++ L+G
Sbjct: 3240 CVDGYAILSDDRTCKRVST--DPEPWLLFANKHYVRKLTLDG 3279
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 104/217 (47%), Gaps = 24/217 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAE---CTPGQFSCGMGKCIP 219
C PN +RC ++ +C+ CDG DC + DE +C N E C +F C +CIP
Sbjct: 1052 CPPNTIRCNNTKKCIPQQYACDGDNDCGDYSDEDVKYCKNGEIPVCAARKFQCDNHRCIP 1111
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
E WKCD DC DGSDE C + C Q C + +CIP WLCD + DC
Sbjct: 1112 EQWKCDSDNDC-GDGSDEKLEMCTNTTCSTNQFTCG-NGRCIPVYWLCDGDNDC-----Y 1164
Query: 278 DNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DNTDED ++ C Q +C ++CI CD + DC ++ DK
Sbjct: 1165 DNTDEDKERCPSALCRPDQFRCNNKRQCISLKNHCDGQQDCDDGSDEESCLSQIDK---- 1220
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C NE C S C+ ++ CDG+ DC +G DE
Sbjct: 1221 ----CTHNEFTCASDGLCIPIAWKCDGQKDCEDGSDE 1253
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 108/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAE--CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE N E CT +F C KCIP+
Sbjct: 3657 CDPWMFKCAATGKCIPKRFICDGDDDCGDRSDETDVICKNKERNCTAEEFRCSNHKCIPK 3716
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3717 MWKCDNDDDCGDGSDEPPECTSIECRKGWTRCSTSYRCIPNWAFCNGQDDCR-----DNS 3771
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE D+ C + G+ +CA S KCIP W+CD E DC D++DE D +
Sbjct: 3772 DEIIDRCPACDDIGEFRCATSGKCIPKRWMCDSENDCG-----DDSDET-DVSCGGTSRP 3825
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC S +C+ +K CDG C++G DE
Sbjct: 3826 CSESEFRC-SDGRCIPGNKVCDGTVQCADGIDE 3857
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 107/237 (45%), Gaps = 44/237 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C +RC ++N C+ + CDG DC + DE FC N C C G+CIPE+W
Sbjct: 2866 CRGVRIRCPNTNICIQPADLCDGYDDCGDKADENKLFCMNQPCAMHYVRCPSGRCIPETW 2925
Query: 223 KCDGFVDCLEDGSDEPNT--------------CIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CDG DC E DE +T + QC NG KCI ++CD E
Sbjct: 2926 QCDGDNDCGESAWDENHTNCTDSAGRRICLGEYLFQCGNG--------KCISRAFICDGE 2977
Query: 269 MDC---STDDIVDN------TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
DC S + I+ N TD++ FH C + +CIP WLCD ++ C+
Sbjct: 2978 DDCGDASDESIIHNCGNRTCTDQE---FH-CKSNVHLTQPKYECIPKAWLCDGDVTCA-- 3031
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
N +++ + C+ E RC ++ CV S CDG DC +G DE C
Sbjct: 3032 ----NGEDESKELCGVEKKDCNKGEFRC-ANKHCVRASWECDGDNDCLDGSDEHANC 3083
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 25/219 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGM-GK 216
++ C RC +S +C+ FC+G+ DC + DE P C+ G+F C GK
Sbjct: 3738 SIECRKGWTRCSTSYRCIPNWAFCNGQDDCRDNSDEIIDRCPACD---DIGEFRCATSGK 3794
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP+ W CD DC +D + +C C + +C+ +CIP N +CD + C+
Sbjct: 3795 CIPKRWMCDSENDCGDDSDETDVSCGGTSRPCSESEFRCS-DGRCIPGNKVCDGTVQCA- 3852
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D DE K +C G ++C CIP + CD DC N ++
Sbjct: 3853 ----DGIDESQCKMRECNAGFMKCD-DGTCIPEHRWCDRRRDCP------NASDESHCEN 3901
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C P E CG+S C+ CDG DC + DE
Sbjct: 3902 HPNRRECSPFEFECGNS-VCIPRKFICDGDNDCGDNSDE 3939
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 107/254 (42%), Gaps = 60/254 (23%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKC 217
C + CG + +C+ +CDG+PDC +G DE GP C G+F C C
Sbjct: 3575 CTDRQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGKDICGPRI---CVVGEFQCNNHNC 3631
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC-----S 272
CDG DC DGSDE C C +CA + KCIP ++CD + DC
Sbjct: 3632 TRPFQLCDGNDDC-GDGSDEVE-CDKPCDPWMFKCAATGKCIPKRFICDGDDDCGDRSDE 3689
Query: 273 TDDIVDNTDED--WDKFH--------------------------------QCFNGQVQCA 298
TD I N + + ++F +C G +C+
Sbjct: 3690 TDVICKNKERNCTAEEFRCSNHKCIPKMWKCDNDDDCGDGSDEPPECTSIECRKGWTRCS 3749
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S +CIP+ C+ + DC DN+DE D+ + + + E RC +S +C+
Sbjct: 3750 TSYRCIPNWAFCNGQDDCR-----DNSDEIIDRCPACDDI----GEFRCATSGKCIPKRW 3800
Query: 359 FCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 3801 MCDSENDCGDDSDE 3814
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 95/206 (46%), Gaps = 17/206 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQ-FSCGMGKCIPESWKC 224
P +CG + C+ALS C+GK DC++G DE +CN P Q F C +CI +C
Sbjct: 2741 PYNFQCGDGS-CIALSATCNGKQDCTDGSDEHSAYCNTRVCPEQYFLCSNRRCIDADRQC 2799
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ DC D SDE + C +G +C+ + CI +CD DC + + D E
Sbjct: 2800 NNVDDC-GDNSDELDCTATSSACPSGHFECS-NGHCINSTKVCDGHNDCHDEKVSDENKE 2857
Query: 283 D-WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
D C +++C + CI LCD DC D DE +K F N C
Sbjct: 2858 TCPDLPIDCRGVRIRCPNTNICIQPADLCDGYDDCG-----DKADE--NKLFCMNQP-CA 2909
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCS 367
+ +RC S +C+ + CDG DC
Sbjct: 2910 MHYVRC-PSGRCIPETWQCDGDNDCG 2934
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 150/381 (39%), Gaps = 91/381 (23%)
Query: 95 DLPAPEIFPLDERLEKAG---MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A ++F D L + G ++G R + K SS+ + D L+W D +L
Sbjct: 3438 DFFADKLFWADAHLNEIGFMDLNGGTRHHIPAKRTSHISSMTV--FDDYLFWSDWNLR-- 3493
Query: 152 ESVRVD---GSHNAVLC----HPNELR-------------CGSSN----QCVALSKFCDG 187
E +R D G + VL P+++R CG N LS + G
Sbjct: 3494 EIIRADKWTGMNETVLKVTTQLPSDIRVIHPFRQPKYKNPCGDDNGGCSHLCLLSAYDPG 3553
Query: 188 K----PDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPESWKCDGFVDCLEDGSDEPNTC 241
PD + C +CT QF+CG KCIP+ W CDG DC DGSDEP
Sbjct: 3554 FTCSCPDQFVLLTDNKTCEPQCTDRQFACGGDDAKCIPKLWYCDGEPDC-RDGSDEPGKD 3612
Query: 242 I---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQC 297
I C G+ QC + C LCD DC D +DE + DK C +C
Sbjct: 3613 ICGPRICVVGEFQCN-NHNCTRPFQLCDGNDDCG-----DGSDEVECDK--PCDPWMFKC 3664
Query: 298 ALSKKCIPHNWLC------------------DEEMDCSTDDIVDNTDEDWDKYFSH---- 335
A + KCIP ++C ++E +C+ ++ + + K +
Sbjct: 3665 AATGKCIPKRFICDGDDDCGDRSDETDVICKNKERNCTAEEFRCSNHKCIPKMWKCDNDD 3724
Query: 336 ------------NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNNK 379
++ C RC +S +C+ FC+G+ DC + DE P C+
Sbjct: 3725 DCGDGSDEPPECTSIECRKGWTRCSTSYRCIPNWAFCNGQDDCRDNSDEIIDRCPACD-- 3782
Query: 380 ADCENLKCSHKCSPTPRGAMC 400
D +C+ P+ MC
Sbjct: 3783 -DIGEFRCATSGKCIPKRWMC 3802
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 82/195 (42%), Gaps = 19/195 (9%)
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWL 264
P F CG G CI S C+G DC DGSDE + C + Q +++CI +
Sbjct: 2740 APYNFQCGDGSCIALSATCNGKQDCT-DGSDEHSAYCNTRVCPEQYFLCSNRRCIDADRQ 2798
Query: 265 CDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C+ DC DN+DE C +G +C+ + CI +CD DC + +
Sbjct: 2799 CNNVDDCG-----DNSDELDCTATSSACPSGHFECS-NGHCINSTKVCDGHNDCHDEKVS 2852
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D E + C +RC ++N C+ + CDG DC + DE NK C
Sbjct: 2853 DENKETCPDL----PIDCRGVRIRCPNTNICIQPADLCDGYDDCGDKADE-----NKLFC 2903
Query: 383 ENLKCSHKCSPTPRG 397
N C+ P G
Sbjct: 2904 MNQPCAMHYVRCPSG 2918
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R LV I WP+++ +D + LY+ DS L+ ++ + DG S
Sbjct: 1574 RIERANMDGSERRVLVNSKIYWPNTIALDLTTNRLYFADSKLDYIDFINYDGTGRTQVLS 1633
Query: 160 HNAVLCHPNEL 170
+ HP+ L
Sbjct: 1634 STKFVQHPHSL 1644
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+++A + G +R +V +NI P+ L++D N ++YW D+ L+ + VR DG
Sbjct: 2223 IQRAFLDGSHRQVIVHENIAEPTDLIVDPNSHMIYWTDAKLDGIYRVRADGG 2274
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQ---SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
D DK ++ +G + + ++RN+ S F++ + R+ N + +WD
Sbjct: 1420 DADKRTCKVTDGVQDMRIYVSNRNRIYWSDRFLENWHTFEARVE----NAIALAWDSVED 1475
Query: 100 EIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
++ D R +K A +G N + +++ + + +D+ LYW DS LNT+E +
Sbjct: 1476 RVYWSDIREKKIYSATRNGTNVTVFISEGLDVTEGIALDWVARNLYWVDSSLNTIEVASL 1535
Query: 157 DG-SHNAVLCHPN 168
+ AVL H N
Sbjct: 1536 ERPGARAVLIHEN 1548
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNA 162
D ++E A M G++R ++ I P+SL +D +D +YW D VESV DG+
Sbjct: 4299 FDAKIECADMDGKHRDVIIKDLIYSPTSLTVDEGKDNRIYWADPKYRKVESVLPDGTRRT 4358
Query: 163 VLCHPNEL 170
+ N +
Sbjct: 4359 TVIVNNRM 4366
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+A M G +R ++ + + P++L ID + LYW D + +ES DG +
Sbjct: 2551 RIERANMAGGDRHIVLKEGVSLPAALAIDLREQRLYWADINKLNIESSDYDGKSRRTV 2608
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E + G++R L++ + PSSL +D LYW D +++ +DGSH V+ H
Sbjct: 2179 IEVCQLDGKHRKILLSTKTETPSSLAVDPVGRYLYWADQGQKPSIQRAFLDGSHRQVIVH 2238
Query: 167 PN 168
N
Sbjct: 2239 EN 2240
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNA-----ECTPGQFSC 212
NAV P RC S C+ + + C+G DC + ++ C++ +CT QF C
Sbjct: 3946 NAVCDPPLRFRCAHSRLCLNILQLCNGIDDCGPFDHSDEHLSMCSSFSEYGDCTTNQFKC 4005
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDE 237
GKCI S CD DC D SDE
Sbjct: 4006 TNGKCINASLACDHNDDC-GDASDE 4029
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 62/144 (43%), Gaps = 24/144 (16%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNV-----------SSVRLRCA 85
+D + ++ + + GT +A+++ R + Q++++ + +R R A
Sbjct: 3322 LDQPIDSYEVVLRHNVFGTEGIAIDWIGRKLYMLNRQERSLRVCELDGRYCRTLIRDRIA 3381
Query: 86 QINDLL----------NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
Q ++ W L A + L+ + + L ++ WP++L ID
Sbjct: 3382 QPKAIVIHPEKGYLYFTEWSLQA---YIGRVSLDGSPQLSDPVEKLAENDLGWPNALAID 3438
Query: 136 YNQDILYWCDSHLNTVESVRVDGS 159
+ D L+W D+HLN + + ++G
Sbjct: 3439 FFADKLFWADAHLNEIGFMDLNGG 3462
>gi|65301167|ref|NP_003374.3| very low-density lipoprotein receptor isoform a precursor [Homo
sapiens]
gi|1730111|sp|P98155.1|VLDLR_HUMAN RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|391734|dbj|BAA03945.1| very low density lipoprotein receptor [Homo sapiens]
gi|407221|dbj|BAA03969.1| very low density lipoprotein receptor [Homo sapiens]
gi|688371|gb|AAB31735.1| very low density lipoprotein receptor [Homo sapiens]
gi|66394594|gb|AAY46157.1| very low density lipoprotein receptor [Homo sapiens]
gi|119579209|gb|EAW58805.1| very low density lipoprotein receptor, isoform CRA_b [Homo sapiens]
gi|119579210|gb|EAW58806.1| very low density lipoprotein receptor, isoform CRA_b [Homo sapiens]
gi|187950383|gb|AAI36563.1| Very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|65301164|ref|NP_001018066.1| very low-density lipoprotein receptor isoform b precursor [Homo
sapiens]
gi|391736|dbj|BAA03946.1| very low density lipoprotein receptor [Homo sapiens]
gi|119579208|gb|EAW58804.1| very low density lipoprotein receptor, isoform CRA_a [Homo sapiens]
gi|119579211|gb|EAW58807.1| very low density lipoprotein receptor, isoform CRA_a [Homo sapiens]
gi|148744344|gb|AAI42654.1| Very low density lipoprotein receptor [Homo sapiens]
gi|219521548|gb|AAI44246.1| Very low density lipoprotein receptor [Homo sapiens]
gi|307685575|dbj|BAJ20718.1| very low density lipoprotein receptor [synthetic construct]
Length = 845
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|292606979|gb|ADE34168.1| lipophorin receptor short isoform [Nilaparvata lugens]
Length = 907
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 163/368 (44%), Gaps = 68/368 (18%)
Query: 164 LCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C P+E C G+ +CV L+ CD PDCS+G DE CN C +F+CG GKCI + W
Sbjct: 137 VCDPDEFTCRGNPGECVPLTWMCDDNPDCSDGSDEKS-CNETCRSDEFTCGNGKCIQKRW 195
Query: 223 KCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD +DC EDGSDE N +C C CI NW CD+++DC D D
Sbjct: 196 VCDSDLDC-EDGSDEHNCPPTKCDPTSGFACGNGSICININWRCDKDLDCP-----DGED 249
Query: 282 E-DWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--- 331
E D H+ C + +C CI +WLCD DC D +DE ++
Sbjct: 250 EQDCGASHKPIFKSVCAEREFECPDRLTCIHQSWLCDGNEDCP-----DGSDERLEQCAN 304
Query: 332 -------------------YFSHNAVLCHP----------------NELRCGSSNQCVAL 356
F + V CH E CG+ N C+A+
Sbjct: 305 LTCRDDEFQCRSRECIAGHLFCNGIVDCHDGSDEDCATQRPACDPHTEFDCGN-NMCIAM 363
Query: 357 SKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQC 413
+ CD K DC GEDE G C N+ N CS C TP G C C P + + C
Sbjct: 364 EQVCDRKEDCPQGEDEPGDKCGVNECLDHNGHCSQLCVDTPAGHYCDCHPGYKLVDNRTC 423
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTV 472
D DEC G+C Q C N ++ C C GY P D C A + AS++F+
Sbjct: 424 DDIDECENPGACSQICINEKGTFKCECHRGYLRDPHDHTRCKAT----EGHASLLFARRH 479
Query: 473 DIRRIHLN 480
DIR+I L+
Sbjct: 480 DIRKISLD 487
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN--AECTPGQFSCGMGKCIPES 221
C + +C ++++C+ CDG+ DC + DE P C CT +F C G+CIP+
Sbjct: 55 CSLRQFKC-ANDKCIQQQWVCDGEDDCGDETDETAPECKEPRSCTETEFRCSNGRCIPKH 113
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC++ G + P+ C H+ C + C + +C+P W+CD+ DCS D
Sbjct: 114 WQCDNENDCVDGGDEHPSLCEHRVCDPDEFTCRGNPGECVPLTWMCDDNPDCS-----DG 168
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--A 337
+DE C + + C + KCI W+CD ++DC D +DE HN
Sbjct: 169 SDEK-SCNETCRSDEFTCG-NGKCIQKRWVCDSDLDCE-----DGSDE-------HNCPP 214
Query: 338 VLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P CG+ + C+ ++ CD DC +GEDE
Sbjct: 215 TKCDPTSGFACGNGSICININWRCDKDLDCPDGEDE 250
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPH 261
+C+ QF C KCI + W CDG DC ++ + C C + +C+ + +CIP
Sbjct: 54 DCSLRQFKCANDKCIQQQWVCDGEDDCGDETDETAPECKEPRSCTETEFRCS-NGRCIPK 112
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCST 318
+W CD E DC VD DE + C + C + +C+P W+CD+ DCS
Sbjct: 113 HWQCDNENDC-----VDGGDEHPSLCEHRVCDPDEFTCRGNPGECVPLTWMCDDNPDCS- 166
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE S N C +E CG+ +C+ CD DC +G DE
Sbjct: 167 ----DGSDEK-----SCNET-CRSDEFTCGNG-KCIQKRWVCDSDLDCEDGSDE 209
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+AGM G +R +++ +I+WP+ L +D + +YW D+ L+TV S DGS+ +
Sbjct: 610 RIERAGMDGTHRQVVISYDIKWPNGLTLDLVRSRIYWIDAKLSTVSSCNYDGSNRLTI 667
>gi|238637303|ref|NP_038731.2| very low-density lipoprotein receptor isoform a precursor [Mus
musculus]
gi|1730112|sp|P98156.1|VLDLR_MOUSE RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|148709699|gb|EDL41645.1| very low density lipoprotein receptor, isoform CRA_a [Mus musculus]
Length = 873
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 MSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|292606977|gb|ADE34167.1| lipophorin receptor long isoform [Nilaparvata lugens]
Length = 921
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 125/368 (33%), Positives = 163/368 (44%), Gaps = 68/368 (18%)
Query: 164 LCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C P+E C G+ +CV L+ CD PDCS+G DE CN C +F+CG GKCI + W
Sbjct: 151 VCDPDEFTCRGNPGECVPLTWMCDDNPDCSDGSDEKS-CNETCRSDEFTCGNGKCIQKRW 209
Query: 223 KCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD +DC EDGSDE N +C C CI NW CD+++DC D D
Sbjct: 210 VCDSDLDC-EDGSDEHNCPPTKCDPTSGFACGNGSICININWRCDKDLDCP-----DGED 263
Query: 282 E-DWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--- 331
E D H+ C + +C CI +WLCD DC D +DE ++
Sbjct: 264 EQDCGASHKPIFKSVCAEREFECPDRLTCIHQSWLCDGNEDCP-----DGSDERLEQCAN 318
Query: 332 -------------------YFSHNAVLCHP----------------NELRCGSSNQCVAL 356
F + V CH E CG+ N C+A+
Sbjct: 319 LTCRDDEFQCRSRECIAGHLFCNGIVDCHDGSDEDCATQRPACDPHTEFDCGN-NMCIAM 377
Query: 357 SKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQC 413
+ CD K DC GEDE G C N+ N CS C TP G C C P + + C
Sbjct: 378 EQVCDRKEDCPQGEDEPGDKCGVNECLDHNGHCSQLCVDTPAGHYCDCHPGYKLVDNRTC 437
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTV 472
D DEC G+C Q C N ++ C C GY P D C A + AS++F+
Sbjct: 438 DDIDECENPGACSQICINEKGTFKCECHRGYLRDPHDHTRCKAT----EGHASLLFARRH 493
Query: 473 DIRRIHLN 480
DIR+I L+
Sbjct: 494 DIRKISLD 501
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 28/216 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN--AECTPGQFSCGMGKCIPES 221
C + +C ++++C+ CDG+ DC + DE P C CT +F C G+CIP+
Sbjct: 69 CSLRQFKC-ANDKCIQQQWVCDGEDDCGDETDETAPECKEPRSCTETEFRCSNGRCIPKH 127
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC++ G + P+ C H+ C + C + +C+P W+CD+ DCS D
Sbjct: 128 WQCDNENDCVDGGDEHPSLCEHRVCDPDEFTCRGNPGECVPLTWMCDDNPDCS-----DG 182
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--A 337
+DE C + + C + KCI W+CD ++DC D +DE HN
Sbjct: 183 SDEK-SCNETCRSDEFTCG-NGKCIQKRWVCDSDLDCE-----DGSDE-------HNCPP 228
Query: 338 VLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P CG+ + C+ ++ CD DC +GEDE
Sbjct: 229 TKCDPTSGFACGNGSICININWRCDKDLDCPDGEDE 264
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPH 261
+C+ QF C KCI + W CDG DC ++ + C C + +C+ + +CIP
Sbjct: 68 DCSLRQFKCANDKCIQQQWVCDGEDDCGDETDETAPECKEPRSCTETEFRCS-NGRCIPK 126
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCST 318
+W CD E DC VD DE + C + C + +C+P W+CD+ DCS
Sbjct: 127 HWQCDNENDC-----VDGGDEHPSLCEHRVCDPDEFTCRGNPGECVPLTWMCDDNPDCS- 180
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE S N C +E CG+ +C+ CD DC +G DE
Sbjct: 181 ----DGSDEK-----SCNET-CRSDEFTCGNG-KCIQKRWVCDSDLDCEDGSDE 223
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+AGM G +R +++ +I+WP+ L +D + +YW D+ L+TV S DGS+ +
Sbjct: 624 RIERAGMDGTHRQVVISYDIKWPNGLTLDLVRSRIYWIDAKLSTVSSCNYDGSNRLTI 681
>gi|380786209|gb|AFE64980.1| very low-density lipoprotein receptor isoform a precursor [Macaca
mulatta]
Length = 873
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 167/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ C + S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCAAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGVHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ CA S +CIP +W CD E DC +
Sbjct: 85 VPNRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCAAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPSEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGVHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|18957994|gb|AAL79675.1| putative ovarian lipoprotein receptor [Penaeus semisulcatus]
Length = 1081
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 122/378 (32%), Positives = 158/378 (41%), Gaps = 81/378 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C RC S C+ CD + +C +G DE C C + +C GKC+P+ W
Sbjct: 205 VTCSSVHWRC-KSGMCIPKMWVCDQEKECDDGSDETE-CVTSCPDHKVACRDGKCVPKVW 262
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCDG DCL DGSDE N C +C N + C+ +K C+PH+ CD E DC D +DE
Sbjct: 263 KCDGDKDCL-DGSDEEN-CPVECANNEFTCS-NKNCVPHDAKCDGEDDCG-----DGSDE 314
Query: 283 D--W----DKFHQCFNGQVQCA-------------------------------------- 298
W D C +GQ+ C
Sbjct: 315 ALPWCQPPDTRMTCPSGQILCERHDISSPRVCIKLDNVCNGVRDCPLGEDEDCDNCARHE 374
Query: 299 ---LSKKCIPHNWLCDEEMDCS---------------TDDIVDNTDEDWDKYFSHNAVLC 340
LS+ CIP W+CD E DC+ +D D + D + V C
Sbjct: 375 FSCLSRGCIPRGWMCDGEEDCTDGSDESHAAGCLFAQGNDTADTSLNGSDGKAAPVPV-C 433
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+E CG C+A S CDG DC +G DEG C N C H C P+ +C
Sbjct: 434 GMHEFECGIGG-CIASSLVCDGSADCPDGSDEGSLCAKSCQ-GNGGCQHICKEGPKNRIC 491
Query: 401 FCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN- 457
C G + Q C+D EC + +C Q C H Y+CSC GYTLRPD +SC
Sbjct: 492 SCWKGFQLAEDQMSCIDVKECDDEATCSQKCEERHGYYLCSCLPGYTLRPDRRSCKPTGG 551
Query: 458 ---VPQDEPASIIFSSTV 472
V P SI+ S+
Sbjct: 552 DEYVVLVHPGSILNMSSA 569
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 111/224 (49%), Gaps = 33/224 (14%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPE 220
+V C+ + C S+ C+ L+ CD PDC +GEDE + C +F C G CI +
Sbjct: 122 SVQCNDIQFHCFRSHTCIPLTWRCDLTPDCRDGEDEEDCKEIKTCKEKEFQCSTGSCINK 181
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCSTD 274
W CDG DC EDGSDE + +C N V C+ S CIP W+CD+E +C
Sbjct: 182 LWTCDGVHDC-EDGSDEK---LDECTN--VTCSSVHWRCKSGMCIPKMWVCDQEKEC--- 232
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D+ ++ + C + +V C KC+P W CD + DC +D +DE+
Sbjct: 233 ---DDGSDETECVTSCPDHKVACR-DGKCVPKVWKCDGDKDC-----LDGSDEE------ 277
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN 377
+ V C NE C + N CV CDG+ DC +G DE P+C
Sbjct: 278 NCPVECANNEFTCSNKN-CVPHDAKCDGEDDCGDGSDEALPWCQ 320
>gi|437387|gb|AAA61344.1| very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|47210425|emb|CAF92450.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4260
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 109/316 (34%), Positives = 145/316 (45%), Gaps = 48/316 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
CHP + +C ++C+ S CDG DC +G DE C CT +F C G +CI ++
Sbjct: 682 CHPGQFQC-PDHRCIDPSYVCDGDRDCVDGADERG-CIYNCTANEFKCASGHQCINGYYR 739
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE P C H+ + QC CIP W CD DC
Sbjct: 740 CDGVFDCT-DRSDERACPTRPPGMCHHE---SEFQCQSDGTCIPSTWECDGHPDCE---- 791
Query: 277 VDNTDEDW--------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D++DE F +C NG C+ +W+CD + DC D+ D D
Sbjct: 792 -DSSDEHHACPPRTCPSTFFRCDNGN--------CVLRSWICDGDNDCR--DMSDERDCP 840
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKC 387
+ C + +C + C+ L+ CD PDC NG DE P CN ++ N C
Sbjct: 841 TPPF------RCPSWQWQCPGHSVCINLTTVCDNTPDCPNGADESPLCNQESCSDNNAGC 894
Query: 388 SHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+H C P GA C CP G N +KT C D DEC G C Q C N S+ C C +GY
Sbjct: 895 THGCIQGPFGAQCTCPVGYQLSNDSKT-CGDVDECSPPGICSQHCFNERGSFRCHCQDGY 953
Query: 445 TLRPDGKSCTAVNVPQ 460
L D ++C ++ Q
Sbjct: 954 ALEADQRTCKVSDLRQ 969
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 158/370 (42%), Gaps = 62/370 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
A C +E RC SS +C+ +CDG DCS+ DE C + C QF C G+CI
Sbjct: 2408 ASTCSQSEFRC-SSGRCIPARWYCDGGADCSDSSDEPLSCTPQVRTCNTEQFRCDDGRCI 2466
Query: 219 PESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCS 272
+W CDG DC + D N C N + C +KCIP +W+CD + DC+
Sbjct: 2467 ASTWICDGDNDCGDMSDEDQRHNCANRTCSNAEFTCVNNQPPQRKCIPRDWVCDGDADCA 2526
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
+D D +DE + C Q C
Sbjct: 2527 DALDEHQNCTRRSCGVNEFTCSNGLCIRSSYRCDRRNDCGDGSDEQGCTYQACQQHQFTC 2586
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCGSSNQCVAL 356
+ +CI +++CD + DC D +DE ++ H A C P E RC + C++L
Sbjct: 2587 Q-NGRCISRDFVCDGDNDCG-----DESDEL--EHMCHTPAPTCPPGEFRC-DNGHCISL 2637
Query: 357 SKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQC 413
S+ CD DCS+ DE G N D C H C+ TP +C C G + C
Sbjct: 2638 SRVCDRNDDCSDNSDEKGCGVNECTDPSIHHCDHSCTDTPTSFICTCRPGYRLMSDGKTC 2697
Query: 414 VDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
D +EC C Q C NT SYVC C G+ PDG SC + D +IFS+
Sbjct: 2698 DDVNECAETPRVCSQVCENTVGSYVCKCAPGFLREPDGHSCRQNS---DIAPYLIFSNRY 2754
Query: 473 DIRRIHLNGS 482
+R + +G+
Sbjct: 2755 YLRNLSTDGA 2764
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 153/357 (42%), Gaps = 88/357 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C P + +C S+N C+ S CDG DC + DE P + C+ +F C G+CIP W
Sbjct: 2369 CQPEQTKCQSTNICIPRSYLCDGDNDCGDMSDESPTHCVASTCSQSEFRCSSGRCIPARW 2428
Query: 223 KCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC D SDEP +C + C Q +C +CI W+CD + DC D
Sbjct: 2429 YCDGGADC-SDSSDEPLSCTPQVRTCNTEQFRCD-DGRCIASTWICDGDNDCG-----DM 2481
Query: 280 TDEDWD---KFHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+DED C N + C +KCIP +W+CD + DC+ + D++
Sbjct: 2482 SDEDQRHNCANRTCSNAEFTCVNNQPPQRKCIPRDWVCDGDADCA---------DALDEH 2532
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------ 374
+ C NE C S+ C+ S CD + DC +G DE
Sbjct: 2533 QNCTRRSCGVNEFTC-SNGLCIRSSYRCDRRNDCGDGSDEQGCTYQACQQHQFTCQNGRC 2591
Query: 375 -----FCNNKADC--ENLKCSHKC-SPTPRGAMCFCPAGQ-------------------- 406
C+ DC E+ + H C +P P CP G+
Sbjct: 2592 ISRDFVCDGDNDCGDESDELEHMCHTPAPT-----CPPGEFRCDNGHCISLSRVCDRNDD 2646
Query: 407 ---NPNKTQCVDADECLIDGS---CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
N ++ C +EC D S CD +CT+T S++C+C GY L DGK+C VN
Sbjct: 2647 CSDNSDEKGC-GVNEC-TDPSIHHCDHSCTDTPTSFICTCRPGYRLMSDGKTCDDVN 2701
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/214 (36%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + RC ++ +C+ + CDG+ DC +G DE C C GQF C G C
Sbjct: 3057 MCTSTQYRCANNERCIPIWWKCDGQRDCRDGSDEPSTCPVRHCRLGQFQCNDGNCTSPHL 3116
Query: 223 KCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE P C HQC N Q QCA +K+CIP +W CD E DC D +
Sbjct: 3117 LCNSHQDC-HDGSDEDPVLCATHQCENHQWQCA-NKRCIPESWQCDGEDDCG-----DQS 3169
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC DN+DE ++
Sbjct: 3170 DEDPAHCSSRTCRPGQFKCR-NGRCIPQSWKCDVDNDCG-----DNSDEPLEECMGPAYR 3223
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +CV + C+G DC + DE
Sbjct: 3224 CDNHTEFSCRTNYRCVPMWSVCNGHNDCRDDSDE 3257
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 104/214 (48%), Gaps = 26/214 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESW 222
C N CG+ +CV S CDG DC + DE N+ C+P F+C +C+P +W
Sbjct: 559 CGANSFSCGNG-KCVPNSYRCDGVDDCHDNSDEVDCGVNNSTCSPTAFTCANTRCVPAAW 617
Query: 223 KCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+CDG DC D SDE P C Q C+ + +C+PH+W CD + DC D
Sbjct: 618 RCDGHNDCF-DNSDESSCPAPAPGTCPANQFTCS-NHRCVPHSWRCDTDNDCG-----DG 670
Query: 280 TDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE D C GQ QC +CI +++CD + DC VD DE Y
Sbjct: 671 SDEADCQLGSTCHPGQFQCP-DHRCIDPSYVCDGDRDC-----VDGADERGCIYN----- 719
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C NE +C S +QC+ CDG DC++ DE
Sbjct: 720 -CTANEFKCASGHQCINGYYRCDGVFDCTDRSDE 752
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 138/340 (40%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYN------------------------------ 137
+ + GM G N++P++T ++WP+ + IDY
Sbjct: 2892 IGRVGMDGTNKAPIITTKLEWPNGITIDYTNDKLYWSDAHLSYIEFSDLDGQHRHTVYDG 2951
Query: 138 -----------QDILYWCDSHLNTVESV-RVDGSHNAVL------------CHPNELRCG 173
+D +YW D + TVE + DGS L CHP
Sbjct: 2952 NLPHPFALTVFEDTVYWTDWNTRTVEKGNKYDGSGRQALVNTTHRPFDIHVCHPYRQPI- 3010
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGP----------------FCNAECTPGQFSCGMG-K 216
+N C + C +G E C CT Q+ C +
Sbjct: 3011 VTNPCAVNNGGCSHLCLIRHGGQEHTCECPDHFLTIQIGGVTRCLPMCTSTQYRCANNER 3070
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP WKCDG DC DGSDEP+TC + C GQ QC PH LC+ DC
Sbjct: 3071 CIPIWWKCDGQRDC-RDGSDEPSTCPVRHCRLGQFQCNDGNCTSPH-LLCNSHQDCH--- 3125
Query: 276 IVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DED HQC N Q QCA +K+CIP +W CD E DC D +DED
Sbjct: 3126 --DGSDEDPVLCATHQCENHQWQCA-NKRCIPESWQCDGEDDCG-----DQSDED----P 3173
Query: 334 SH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H ++ C P + +C + +C+ S CD DC + DE
Sbjct: 3174 AHCSSRTCRPGQFKC-RNGRCIPQSWKCDVDNDCGDNSDE 3212
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/330 (30%), Positives = 146/330 (44%), Gaps = 28/330 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F C G CI E +KC
Sbjct: 3305 CTESEYRC-DNLRCIPNRWVCDHDNDCEDNSDERDCELRTCHPGYFQCTSGHCISERFKC 3363
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D +DE +C + NG +C H + DD DN+DE+
Sbjct: 3364 DGNPDCL-DYTDE-TSCPTRFPNGTYCPPFMFECKNHVCVQPHWKCDGDDDCGDNSDEE- 3420
Query: 285 DKFHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNA 337
H C + Q + + +CI + LC+ DC +D+I +N + + +H
Sbjct: 3421 --LHLCIDIQCETPFRFRCDNNRCIYSHELCNSVNDCGDGSDEIPENCERN-SPNPTHGP 3477
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPR 396
C E +C S+ C+ L CD DC + DE G + C + C H C+
Sbjct: 3478 --CTDEEYKC-SNGHCIPLPYACDDYDDCGDQSDELGCHRGSTHTCSDNICEHNCTDLRE 3534
Query: 397 GA-MCFCPAGQNPNKTQ---CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL--RPDG 450
G +C C G P T+ C D +EC + G+C Q C NT S+ C C +G+ P G
Sbjct: 3535 GGLLCSCRPGYKPRATEKHMCEDVNECEVYGTCPQECKNTKGSFECFCAKGFVSIGEPHG 3594
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A Q P ++ V IRR +L+
Sbjct: 3595 TECAA----QGNPPVLLLPDNVRIRRFNLS 3620
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 143/343 (41%), Gaps = 71/343 (20%)
Query: 77 VSSVRLRCAQINDLLNSWDLPAPEIFPLD---ERLEKAGMHGENRSPL-VTKNIQWPSSL 132
+S V N L W+ A ++ +D +++E + G+NR L I P L
Sbjct: 395 LSIVNTTLGWPNGLAIDWN--AMRLYWVDAFFDKIEHSNFDGQNRISLDRITQISHPFGL 452
Query: 133 VIDYNQDILYWCDSHLNTVESVR-VDGSHNAVL----CHPNELRCGSS------NQCVAL 181
I + Y+ D L + VR DG ++ H ++ SS N C L
Sbjct: 453 TI--FEGYAYYTDWRLGGIVRVRKTDGGEMVIIRRGISHIMHVKSFSSTSQTGFNLCNRL 510
Query: 182 -------SKFCDGKPD------CSNG--------------EDEGPFCNAECTPGQFSCGM 214
S FC PD C G +E P +C FSCG
Sbjct: 511 TNPNGDCSHFCFPVPDSQRVCGCPYGMKLLPNQRTCVEDPSNEPP--TLQCGANSFSCGN 568
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKC+P S++CDG DC D SDE + ++ C CA + +C+P W CD DC
Sbjct: 569 GKCVPNSYRCDGVDDC-HDNSDEVDCGVNNSTCSPTAFTCA-NTRCVPAAWRCDGHNDC- 625
Query: 273 TDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DN+DE C Q C+ + +C+PH+W CD + DC D +DE
Sbjct: 626 ----FDNSDESSCPAPAPGTCPANQFTCS-NHRCVPHSWRCDTDNDCG-----DGSDEAD 675
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ S CHP + +C ++C+ S CDG DC +G DE
Sbjct: 676 CQLGS----TCHPGQFQC-PDHRCIDPSYVCDGDRDCVDGADE 713
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 106/241 (43%), Gaps = 55/241 (22%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
++ +C+ S CDG+ DC + DE P C++ C PGQF C G+CIP+SWKCD DC
Sbjct: 3148 ANKRCIPESWQCDGEDDCGDQSDEDPAHCSSRTCRPGQFKCRNGRCIPQSWKCDVDNDC- 3206
Query: 232 EDGSDEP-NTCIHQCF----NGQVQCALSKKCIPHNWLCDEEMDCSTDD----------- 275
D SDEP C+ + + + C + +C+P +C+ DC D
Sbjct: 3207 GDNSDEPLEECMGPAYRCDNHTEFSCRTNYRCVPMWSVCNGHNDCRDDSDEQGCDELTCD 3266
Query: 276 ------------------------IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
DN+DE C + +C + +CIP+ W+CD
Sbjct: 3267 PTGDFRCNNHRCIPLRWRCDGDDDCGDNSDERSCTPRTCTESEYRCD-NLRCIPNRWVCD 3325
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DC DN+DE CHP +C +S C++ CDG PDC + D
Sbjct: 3326 HDNDCE-----DNSDER-----DCELRTCHPGYFQC-TSGHCISERFKCDGNPDCLDYTD 3374
Query: 372 E 372
E
Sbjct: 3375 E 3375
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 59/310 (19%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G +R +V+ I +P ++ + ++Q +YW D + ++ + DGS V+
Sbjct: 2112 QKIERSSLTGSDREVIVSTAI-YPFAMTM-FDQ-FIYWTDWNTRSIYRANKHDGSGQRVM 2168
Query: 165 CH-----PNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
P ++ +S + C + C +G+ ++ +
Sbjct: 2169 IQNLPSRPMDIHVLASRKQQQCDSPCQQFNGGCSHICTPGPNGAECHCPSEGRWYLADSK 2228
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--------PNTCI---HQ 244
P C PGQF+C G CI WKCD DC DGSDE P I H
Sbjct: 2229 HCIPDNGTRCQPGQFTCMNGHCIRAQWKCDNENDC-GDGSDELERVCGPKPKFTIVAFHT 2287
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C C + +C+P+++ CD DC DN+DE F C + + +CI
Sbjct: 2288 CEPTVFTCG-NGRCVPYHYRCDHYDDCG-----DNSDELGCLFRPCDPSREFTCNNGRCI 2341
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
+++C+ +C + D + C P + +C S+N C+ S CDG
Sbjct: 2342 AKDYVCNGINNCYDNGTSDEQNCP--------ERTCQPEQTKCQSTNICIPRSYLCDGDN 2393
Query: 365 DCSNGEDEGP 374
DC + DE P
Sbjct: 2394 DCGDMSDESP 2403
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
R+E A M G+NR+ LV +++ WP+ L +DY N + +YWCDS NTVES++ DG+ +
Sbjct: 3786 RIETAWMDGQNRAVLVDEDLGWPTGLTVDYLNGNRIYWCDSKENTVESMKPDGTDRKAVI 3845
Query: 166 HPNELRCGSSNQCVALSKF 184
S Q ALS F
Sbjct: 3846 --------SGGQSSALSGF 3856
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
LE+A M G NR ++ + WPS + +D +YW DS + +E+ DG H + H
Sbjct: 92 LERAFMDGTNRYGIIGTKLGWPSGITLDIEAKRIYWVDSRYDYIETATYDGVHRKTVVH 150
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 17/134 (12%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
W Y +L L+ HR + +NV++ R + D +S L +
Sbjct: 1059 WTDY---VLETVEVSKLDGTHRT----VLVSENVTNPR---GLVLDPRSSAHLMFWTDWG 1108
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG----- 158
+ R+E+A M G+ R+ +V + WP+ L IDY ++LY+ D++L+ ++ +G
Sbjct: 1109 RNPRIERASMDGKLRTVIVNSKLYWPNGLTIDYPNNLLYFADAYLDFIDYCDYNGNNRKQ 1168
Query: 159 --SHNAVLCHPNEL 170
+ + VL HP+ +
Sbjct: 1169 VLASDLVLQHPHAI 1182
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 17/128 (13%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER--- 107
NG +A+++ N F+ + V +RL LL + + P +D R
Sbjct: 1680 NGIRGIAVDWAAGNLYFTNAFLTETYVEVLRLNTTFRRVLLKT-QVDMPRHIVVDPRRRY 1738
Query: 108 -----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
+E+A + G NR+ LV+ I P L +D+ +YW D L+ + V
Sbjct: 1739 LFWADYGQHPKIERALLDGTNRTILVSSGIVTPRGLALDWQSGYVYWVDDSLDMIARVSP 1798
Query: 157 DGSHNAVL 164
G V+
Sbjct: 1799 QGGETEVV 1806
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ A +G +R+ + + SL +D+ LYW D L TVE ++DG+H VL
Sbjct: 1022 DRIWSASNNGSDRTVIFDSGVTVTESLAVDWVGRNLYWTDYVLETVEVSKLDGTHRTVLV 1081
Query: 166 HPN 168
N
Sbjct: 1082 SEN 1084
>gi|380786359|gb|AFE65055.1| very low-density lipoprotein receptor isoform b precursor [Macaca
mulatta]
Length = 845
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 166/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ C + S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCAAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGVHEFQCSTSS-CIPISWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 NQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ CA S +CIP +W CD E DC +
Sbjct: 85 VPNRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCAAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPSEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGVHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|148709700|gb|EDL41646.1| very low density lipoprotein receptor, isoform CRA_b [Mus musculus]
Length = 855
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 123 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 182
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 183 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 235
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 236 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 284
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 285 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 343
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 344 MSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 403
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 404 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 459
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 460 DIRKIGL 466
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 36 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 94
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 95 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 153
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 154 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 213
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 214 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCGSG-ECIHKKW 266
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 267 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 326
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 327 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 386
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 387 GYECDCAAGFEL-IDRKTCGDID 408
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 507 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 565
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 566 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 625
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 626 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 653
>gi|238637305|ref|NP_001154892.1| very low-density lipoprotein receptor isoform b precursor [Mus
musculus]
gi|15489005|gb|AAH13622.1| Vldlr protein [Mus musculus]
Length = 845
Score = 137 bits (346), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 MSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|339253180|ref|XP_003371813.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
gi|316967876|gb|EFV52242.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
Length = 4465
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 131/465 (28%), Positives = 186/465 (40%), Gaps = 108/465 (23%)
Query: 108 LEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL- 164
+E+A M G R PLV + + WP+ L +DY LYWCD+ L+ +E +R DGS ++
Sbjct: 838 IERANMDGTGRRPLVRGDHQLHWPNGLTLDYTHHWLYWCDAFLDRIERIRFDGSDRQLVL 897
Query: 165 ----------------CHPNELRCGSS--------NQCVALSK----------------- 183
H E R G+ N L+K
Sbjct: 898 TDAPTHPYGLAVFDGRLHWTEFRHGTVMRVALADINPATGLAKQGAVEGSGYVMFFLLQA 957
Query: 184 ---------------------FCDGKPDCSNGEDEGPFCNAECTPG-QFSC-GMGKCIPE 220
CDG DC +G DE C+ C PG +F C CI
Sbjct: 958 YPKCHPTQFTCTNKQCLSMSYVCDGDRDCRDGSDE-LHCDFGCVPGEEFRCTASSPCISS 1016
Query: 221 SWKCDGFVDCLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+KCDG+ DC DGSDE C+ + C Q C +S +CI + CD ++DC +
Sbjct: 1017 LYKCDGYPDC-ADGSDELG-CVKDSNDCGVNQFHCLVSGECIRSLFHCDGDVDC-----L 1069
Query: 278 DNTDED----------WDKFHQ--------CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
D +DE + FH C C S +C+ + +CD C
Sbjct: 1070 DGSDEQNCSRESFIFKFQTFHSLLLIADFDCPPSLFTCNDSSRCLLKSLVCDGNAHCE-- 1127
Query: 320 DIVDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DE + + + PN S+ C+ L K C+ DC++G DEG C+
Sbjct: 1128 ---DGSDESFCGNLFVVEKQHCVEPNFACLNDSSTCLPLWKLCNRVDDCADGSDEGGMCS 1184
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLS 435
+K C C +P G +C C G P+K C D C G C Q C + +
Sbjct: 1185 DKQCSHGNLCDQLCYDSPYGFVCSCRDGYFLQPDKKTCSPRDPCTQWGVCSQHCQSQGVH 1244
Query: 436 YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C GY L + SC + Q + ++FSS +IR I L
Sbjct: 1245 YYCYCEPGYVLSSNKFSCKSA---QPDTPFVMFSSRHEIRLIGLR 1286
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/261 (35%), Positives = 117/261 (44%), Gaps = 31/261 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C +C S C+ CDG+ DC NGEDE N C+ +F C G+CIP+SW
Sbjct: 3312 VCGAGYYQCPLSRICIPYLAVCDGQKDCKNGEDELNCRNRTCSSDEFRCPEGRCIPKSWH 3371
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG +CL G DE N C C +CIP +W CD DC+ D +DE
Sbjct: 3372 CDGEKECLH-GEDELNCSNGSCGGSSFPCKGDGRCIPKSWHCDGYPDCT-----DYSDE- 3424
Query: 284 WDKFHQCFNGQVQCAL-------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
C G V C L K+CI + LCD E DC D +DE
Sbjct: 3425 ----LNCTRGGVVCGLHEWTCHDRKQCIMQSLLCDGERDCD-----DGSDETAAAGCLPG 3475
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC--SPT 394
V C + C + QC+ CDG+ DCS+ DE ++ L CS KC S
Sbjct: 3476 FVTCRSTQFACKNGIQCIPKIWKCDGEADCSDKSDEIGCETDRCSAFGL-CSQKCELSKN 3534
Query: 395 PRGAMCFCPA-----GQNPNK 410
RGA C+C A G NPN+
Sbjct: 3535 GRGAKCYCAAGYSVDGNNPNR 3555
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 121/274 (44%), Gaps = 68/274 (24%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
FS G C P+ CDG +D NG KCIP W+CD+E
Sbjct: 177 FSIVQGSCGPDQLFCDGHID-----------------NG--------KCIPKKWVCDQEY 211
Query: 270 DCSTDDIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT 325
DC +D TDE +K C Q C L+ CIP + CD + DC + D +D +
Sbjct: 212 DC-----IDQTDETPEKCPPRACSPEQFTCLLTGHCIPLGYRCDLDADCGVTVDGRIDRS 266
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-------- 377
DE+ + A C PN RC + + C+ L KFCD + DC +G DEGPFC+
Sbjct: 267 DEENEHCL--QAFSCLPNFHRCSTVDVCIELVKFCDDRLDCPDGSDEGPFCSGMMGWIDS 324
Query: 378 ------NKADC------------ENLKCSHKCSPTPRGAM-CFCPAGQNPNKTQCVD-AD 417
K DC N+ C++ PTP G M C+CP G+ P + QC+ AD
Sbjct: 325 FQLREKRKNDCALLILLFSAFAGRNITCTYGQKPTPDGGMRCYCPPGKKPRRGQCIKPAD 384
Query: 418 E---CLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
E LI T+ + + + EG +L P
Sbjct: 385 EPATILITNGAAVLITDLNFN-IKGTIEGRSLNP 417
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 143/329 (43%), Gaps = 35/329 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF------CNAECTPGQFSCGMGKCI 218
+ C S +C+ S CDG+ DC++G DE G C+A +F C CI
Sbjct: 2581 DSFMCRSQKKCIPRSWRCDGERDCADGSDEEDCGELDESQQNCDAYT---EFKCRDNSCI 2637
Query: 219 PESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
SW CDG DC DG DE P C + +CA + KC+P++ +C+ + DC D
Sbjct: 2638 ARSWLCDGTPDC-SDGDDEYPIMCALTEECEEFKCA-NGKCLPYSKICNYKDDCG--DSF 2693
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ + + C ++QC N +C D D + + A
Sbjct: 2694 ASDERNCSYLFICLENEIQC--------KNGMCLLSEFYCDGDDDCGDGTDEPETCALKA 2745
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHKCSPTP 395
C N+ C ++ C+ S C+G+ DC + DEG CN +C L C H C
Sbjct: 2746 PTCKSNQYEC-TNGVCIDESLTCNGQNDCGDWSDEGHLCNVN-ECAFLVHMCEHVCVDKK 2803
Query: 396 RGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC-TEGYTLRPDGKS 452
G C C +G ++T CVD DEC C QTC N S+ C C ++GY L DG +
Sbjct: 2804 IGYECACNSGFRLAEDRTSCVDIDECTETYPCSQTCYNRFGSFSCECISDGYVLDADGVT 2863
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C + D ++ S I+R + G
Sbjct: 2864 CKHTD---DIAPELLVCSRSTIKRYGMQG 2889
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 149/451 (33%), Gaps = 120/451 (26%)
Query: 44 WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
W + L LA+++ RN C + RL LL L P
Sbjct: 2936 WQILHRHDLRSPDGLAVDWVARNLYWCDKGTDTIEVSRLDGQYRKVLLKGKPLKQPRAIV 2995
Query: 104 LD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDY------------- 136
+D + + + G N +VT +++WP++L +DY
Sbjct: 2996 VDPLAGYLFWSDWGLHAHIGRMDLDGSNVMLIVTDSLKWPNALTLDYVMKRVFWGDAGLN 3055
Query: 137 ----------------------------NQDILYWCDSHLNTVESVRVDGSHNAVLC--- 165
+D LYW D TV+ V+ N L
Sbjct: 3056 YIGMASYDGNGVRKVITFQAFHAFGMYLFEDFLYWTDWETGTVQRVQKHSGQNRSLVIPQ 3115
Query: 166 ------------------HPNELRCGSSNQCVA--LSKFCDGKP---DCSNG--EDEGPF 200
P C C A L + KP DC NG +
Sbjct: 3116 LPYAPMGITVVHPASKPKAPAYAPCRRHGMCAALCLGSRNESKPYTCDCPNGFKKQSDND 3175
Query: 201 CNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDE----PNTC-IHQCFNGQVQCAL 254
C A+C P F C KCIP W+CDG DC DG DE PN C C GQ C+
Sbjct: 3176 CAADCKPSHFVCTKTFKCIPSWWRCDGQDDC-GDGQDELYFVPNACPAFHCLPGQYACSD 3234
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF-------HQCFN-GQVQCALSKKCIPH 306
C+ N LCD ++DC D DE + C GQ +C S CI
Sbjct: 3235 GSTCLNANRLCDGKIDCP-----DGGDEGQGSLTTINCTTYDCVAPGQWKCYKSSICIAE 3289
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
CD +DC + N +C +C S C+ CDG+ DC
Sbjct: 3290 QSFCDGVIDCPNGEDESNC----------TVKVCGAGYYQCPLSRICIPYLAVCDGQKDC 3339
Query: 367 SNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
NGEDE +C N CS P G
Sbjct: 3340 KNGEDE-------LNCRNRTCSSDEFRCPEG 3363
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NA----ECTPGQFSCGMGK 216
A C P+ C + +C+ CDG+ DC +G+DE F NA C PGQ++C G
Sbjct: 3177 AADCKPSHFVCTKTFKCIPSWWRCDGQDDCGDGQDELYFVPNACPAFHCLPGQYACSDGS 3236
Query: 217 -CIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFN-GQVQCALSKKCIPHNWLCDE 267
C+ + CDG +DC DG DE N + C GQ +C S CI CD
Sbjct: 3237 TCLNANRLCDGKIDC-PDGGDEGQGSLTTINCTTYDCVAPGQWKCYKSSICIAEQSFCDG 3295
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+DC + DE C G QC LS+ CIP+ +CD + DC +
Sbjct: 3296 VIDCPNGE-----DESNCTVKVCGAGYYQCPLSRICIPYLAVCDGQKDCKNGE------- 3343
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D+ N C +E RC +C+ S CDG+ +C +GEDE
Sbjct: 3344 --DELNCRNRT-CSSDEFRC-PEGRCIPKSWHCDGEKECLHGEDE 3384
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 114/260 (43%), Gaps = 36/260 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFS-CGMGKCIPESW 222
C+PN SS QC+ + C+G P+C +G+DE +C + P FS C G CI E
Sbjct: 2430 CNPNTEFSCSSGQCIPIELTCNGVPECRDGDDERAEYCTSRDCPAGFSLCDNGMCIEEEK 2489
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFN----------------GQVQCALSKKCIPHNWLCD 266
CDG DC D SDE N I G A + IP
Sbjct: 2490 LCDGVNDC-GDLSDENNCPIWSFMENRCTTANSLPSALRTIGSATEATTVGTIPTK-RSA 2547
Query: 267 EEMDCST-----DDIVDNTDEDWDK-FHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTD 319
+ + C T DD+ N K +C + C KKCIP +W CD E DC+
Sbjct: 2548 QVVVCFTNSTGFDDLHLNIFTTVAKAVEKCTSKDSFMCRSQKKCIPRSWRCDGERDCA-- 2605
Query: 320 DIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN 377
D +DE+ + C E +C N C+A S CDG PDCS+G+DE P C
Sbjct: 2606 ---DGSDEEDCGELDESQQNCDAYTEFKC-RDNSCIARSWLCDGTPDCSDGDDEYPIMCA 2661
Query: 378 NKADCENLKCSH-KCSPTPR 396
+CE KC++ KC P +
Sbjct: 2662 LTEECEEFKCANGKCLPYSK 2681
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 99/247 (40%), Gaps = 56/247 (22%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
+ C G QC LS+ CIP+ +CD + DC ED E
Sbjct: 3310 VKVCGAGYYQCPLSRICIPYLAVCDGQKDC-------KNGED-----------------E 3345
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE--IFPLDERLEKAGMHGENRS 119
N RN++ SS RC + + SW + + DE G G +
Sbjct: 3346 LNCRNRT--------CSSDEFRCPEGRCIPKSWHCDGEKECLHGEDELNCSNGSCGGSSF 3397
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVLCHPNELRCGSSNQC 178
P P S + CD + + T S ++ + V+C +E C QC
Sbjct: 3398 PCKGDGRCIPKS----------WHCDGYPDCTDYSDELNCTRGGVVCGLHEWTCHDRKQC 3447
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPG-------QFSCGMG-KCIPESWKCDGFVDC 230
+ S CDG+ DC +G DE A C PG QF+C G +CIP+ WKCDG DC
Sbjct: 3448 IMQSLLCDGERDCDDGSDETA--AAGCLPGFVTCRSTQFACKNGIQCIPKIWKCDGEADC 3505
Query: 231 LEDGSDE 237
D SDE
Sbjct: 3506 -SDKSDE 3511
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
PL+ +E + + G R ++T +I+ P+S+ ID+ LYW D+ L+ +E R DGS
Sbjct: 2258 PLEPSIETSYLSGAVRRAIITTDIRTPNSIAIDFLVKELYWSDARLDKIERCRYDGS 2314
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E A + G R LV N+ +P+ L +D + LYW D +++E+ ++DG H ++
Sbjct: 3732 RIESAALDGTGRRILVADNLYYPTGLSVDEPNERLYWADPKTSSIETAQLDGRHRHLV 3789
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
A C PN RC + + C+ L KFCD + DC +G DEGPFC+
Sbjct: 276 AFSCLPNFHRCSTVDVCIELVKFCDDRLDCPDGSDEGPFCSG 317
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 35/72 (48%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+I L + + ++G L +++ P L +D+ LYWCD +T+E R+DG
Sbjct: 2918 DISQLSVYIGRVFLNGTGWQILHRHDLRSPDGLAVDWVARNLYWCDKGTDTIEVSRLDGQ 2977
Query: 160 HNAVLCHPNELR 171
+ VL L+
Sbjct: 2978 YRKVLLKGKPLK 2989
>gi|449507090|ref|XP_004176801.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2 [Taeniopygia guttata]
Length = 4625
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 143/304 (47%), Gaps = 33/304 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + +C ++C+ CDG DC +G DE C C+ +F C G +CI ++
Sbjct: 1151 CEPRQFQC-PDHRCIDPFYVCDGDKDCIDGADEHD-CIYNCSATEFXCLSGDQCISTYYQ 1208
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC C+PHNW CD +DC+ D +
Sbjct: 1209 CDGVFDC-NDHSDEADCPTRPPGMCHQNEFQCQSDGSCVPHNWECDGHVDCA-----DGS 1262
Query: 281 DEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE H+C +L + C+ W+CD + DC D+ D D
Sbjct: 1263 DE----HHRCPARTCPPSLFRCDNGNCVYRAWICDGDNDCR--DMSDERD------CPTQ 1310
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + +C + CV LSK CD DC NG DE P CN ++ N C+H+C P
Sbjct: 1311 PFRCPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGP 1370
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
GA C CP G N +KT C D +EC G C Q C N S+ C C EGY L +G++
Sbjct: 1371 FGAQCTCPIGYQLANDSKT-CEDINECDPPGFCSQHCYNERGSFRCYCDEGYILEANGRT 1429
Query: 453 CTAV 456
C A
Sbjct: 1430 CKAA 1433
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 160/328 (48%), Gaps = 38/328 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C S+ QC+ + CD DC++G DE C Q SC G C S +C
Sbjct: 113 CSSQQFTC-SNGQCIPGAYRCDRVEDCTDGTDERVCHYPRCE--QLSCANGACFNASQRC 169
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C C + Q QCA + +CIP +LCD + DC D +DE+
Sbjct: 170 DGKVDC-RDSSDEAN-CTRGCTSTQFQCA-NGECIPQAFLCDHDDDCG-----DRSDENS 221
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C C S +CI +W+CD + DC ++ + H+ C+P E
Sbjct: 222 CTYATCRGNFFTCP-SGRCIHQSWVCDGDDDCEDNEDERGCES------GHHE--CYPGE 272
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S C+ + K CDG DC GEDE G C N + C L C ++C +P G M
Sbjct: 273 WACPGSGHCIPIGKVCDGAADCPEGEDETNITAGRHC-NVSRCAALSCQYRCHSSPSGGM 331
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG--KSC 453
C+CPAG N ++T CVD D+C + G CDQ C + + C C EGY L ++
Sbjct: 332 CYCPAGYTVSSNDSRT-CVDFDDCQMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRAN 390
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
T+ V ASIIFS+ D+ L G
Sbjct: 391 TSAGV-----ASIIFSNGRDLLIGDLYG 413
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 158/407 (38%), Gaps = 102/407 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C +C S+N C+ + CDG DC + DE P + CT +F C G+CIP W
Sbjct: 2824 CQSGFTKCQSTNICIPRTYLCDGDNDCGDMSDESPTHCVSLTCTNSEFRCTSGRCIPAHW 2883
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQC--------------------------- 252
CD +DC DGSDEP +C+ Q C N Q +C
Sbjct: 2884 YCDQGIDC-ADGSDEPASCVPQMRTCSNDQFRCDDDRCIPATWICDGDNDCGDMSDEDQR 2942
Query: 253 -------------------ALSKKCIPHNWLCDEEMDCS--------------------- 272
++CIP W+CD + DCS
Sbjct: 2943 HNCANRNCTAAEFTCANNRPPLRRCIPRAWVCDGDADCSDALDEHQNCTRRSCTENEFTC 3002
Query: 273 --------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+D D++DE + C Q C + +CI ++CD + DC
Sbjct: 3003 SNGLCIRNTYRCDRRNDCGDSSDERGCIYEPCQQHQFTCQ-NGRCISKAYICDGDNDCG- 3060
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN 377
D +DE + S C P+ +C + N C+ L K C+ DC + DE G N
Sbjct: 3061 ----DESDE-LEHLCSTPEATCSPHHFKCDNGN-CIELVKVCNRLDDCLDNSDEKGCGVN 3114
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHL 434
+D C H C+ T C C G +K C D DEC S C Q C NT
Sbjct: 3115 ECSDPSISGCDHDCTDTQTSFYCTCHPGYKLMSDKRTCDDIDECNETPSVCSQICENTAG 3174
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SY+C C GY PDGKSC + +IFS+ +R + +G
Sbjct: 3175 SYICKCAPGYIREPDGKSCRQ---NSNISPYLIFSNRYYLRNLTADG 3218
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKC 217
+H +C + C + +C+ + CDG+ DC +G DE P C + C GQF C G C
Sbjct: 3508 AHCLPMCSSTQFLCADTERCIPIWWKCDGQRDCRDGSDEPPTCPHRYCPVGQFQCNDGNC 3567
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ C+ DC + ++P C HQC Q QCA +K+CIP W CD E DC
Sbjct: 3568 TSSHFLCNTQPDCHDRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG---- 3622
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DED C GQ +C + +CIP +W CD + DC DN+DE + +
Sbjct: 3623 -DNSDEDSAHCASRTCPPGQFKCD-NGRCIPQSWKCDVDDDCG-----DNSDEPFHECMG 3675
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS------ 388
+ + C ++ +C+ L C+G DC + DE CE + CS
Sbjct: 3676 PAYRCDNHTQFSCRTNYRCIPLWAVCNGNDDCRDNSDE-------QGCEEMTCSPSGDFR 3728
Query: 389 ---HKCSP 393
H+C P
Sbjct: 3729 CDNHRCIP 3736
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 140/343 (40%), Gaps = 95/343 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ +AGM G+ ++ +++ ++WP+ L IDY D LYW D+H
Sbjct: 3348 IGRAGMDGKEKTVIISTKLEWPNGLTIDYTNDKLYWTDAHLNYIEYSDLDGHHRHTVYDG 3407
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS VL HP
Sbjct: 3408 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSERTVLVNTTHRPFDIHVYHPYRQPFV 3467
Query: 171 --RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCG-MG 215
CG++N S C K E P C C+ QF C
Sbjct: 3468 NNPCGTNNG--GCSHLCLIKAGGQGFSCECPDNFMVIQFGNTAHCLPMCSSTQFLCADTE 3525
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+CIP WKCDG DC DGSDEP TC H+ C GQ QC C ++LC+ + DC
Sbjct: 3526 RCIPIWWKCDGQRDC-RDGSDEPPTCPHRYCPVGQFQCN-DGNCTSSHFLCNTQPDCH-- 3581
Query: 275 DIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED HQC Q QCA +K+CIP W CD E DC DN+DED
Sbjct: 3582 ---DRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG-----DNSDEDSAHC 3632
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
S C P + +C + +C+ S CD DC + DE PF
Sbjct: 3633 ASRT---CPPGQFKC-DNGRCIPQSWKCDVDDDCGDNSDE-PF 3670
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 150/372 (40%), Gaps = 72/372 (19%)
Query: 163 VLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C P+ + RC +++C+ L CDG DC + DE ECT ++ C +CIP
Sbjct: 3719 MTCSPSGDFRC-DNHRCIPLRWKCDGDNDCGDNSDEHNCSPRECTESEYRCDNLRCIPSR 3777
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC ED SDE + + C G QC S C+ + CD DC +D +D
Sbjct: 3778 WICDHDDDC-EDNSDERDCDLRTCHPGYFQCD-SGHCVAERFRCDGNADC-----LDFSD 3830
Query: 282 ED----------------------------W-------------DKFHQCFNGQVQCAL- 299
E W ++ H C + +
Sbjct: 3831 EAICPTRYPNGTYCPPMLFECKNHVCIQPYWKCDGDNDCGDDSDEELHLCLDIACESPFR 3890
Query: 300 ----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+ +CI + LC++E DC D +DE + C E +C + N C+
Sbjct: 3891 FRCENNRCIYSHELCNQEDDCG-----DGSDEKEEHCREPTPRPCKTEEFKCSNGN-CIP 3944
Query: 356 LSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPNKT-- 411
L CD DC + DE G + C C H C+ G +C C G ++T
Sbjct: 3945 LHYVCDNYDDCGDHFDEIGCNPGTERTCVENICEHNCTNLNEGGFICSCRPGYKASETDR 4004
Query: 412 -QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIF 468
C D +EC I G+C Q C N+ SY C C +G+ D GK C A P ++
Sbjct: 4005 NSCEDINECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAA----DGNPPLLLL 4060
Query: 469 SSTVDIRRIHLN 480
V IRR +++
Sbjct: 4061 PDNVRIRRYNIS 4072
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C C G C CIP ++ CDG DC
Sbjct: 2791 NNGRCISLQYVCNGVNNCYDNGTSDERNCPERTCQSGFTKCQSTNICIPRTYLCDGDNDC 2850
Query: 231 LEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---K 286
+ + P C+ C N + +C S +CIP +W CD+ +DC+ D +DE +
Sbjct: 2851 GDMSDESPTHCVSLTCTNSEFRCT-SGRCIPAHWYCDQGIDCA-----DGSDEPASCVPQ 2904
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNE 344
C N Q +C +CIP W+CD + DC D +DED HN C E
Sbjct: 2905 MRTCSNDQFRCD-DDRCIPATWICDGDNDCG-----DMSDEDQ----RHNCANRNCTAAE 2954
Query: 345 LRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C ++ +C+ + CDG DCS+ DE C ++ EN
Sbjct: 2955 FTCANNRPPLRRCIPRAWVCDGDADCSDALDEHQNCTRRSCTEN 2998
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C++ CD DC +G DE A C P F+CG G+C+P ++CD + DC D
Sbjct: 2713 HCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCVPYHYRCDHYNDC-GDN 2771
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CI ++C+ +C + +DE C +G
Sbjct: 2772 SDELGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYDN---GTSDERNCPERTCQSGF 2828
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP +LCD + DC D +DE S + C +E RC +S +C+
Sbjct: 2829 TKCQSTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---LTCTNSEFRC-TSGRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFC 376
+CD DC++G DE C
Sbjct: 2880 PAHWYCDQGIDCADGSDEPASC 2901
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQF CG G+CIP W+CDG DC +D +DE C Q QC +CIP +W+
Sbjct: 33 CERGQFRCGDGRCIPADWRCDGARDCSDD-TDEAGCPQPTCEGNQFQCQTDGECIPQSWV 91
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD+E DC +DE C + Q C+ + +CIP + CD DC+ D
Sbjct: 92 CDDEEDCDD-----GSDEHQQCPGRTCSSQQFTCS-NGQCIPGAYRCDRVEDCT-----D 140
Query: 324 NTDEDWDKYFSHNAVLCHP---NELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
TDE +CH +L C ++ C S+ CDGK DC + DE
Sbjct: 141 GTDER----------VCHYPRCEQLSC-ANGACFNASQRCDGKVDCRDSSDEA 182
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 138/391 (35%), Gaps = 119/391 (30%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDE-------------GPFC-NAECT 206
P L+CGS + +CV CDG DC + DE +C N +C
Sbjct: 1023 PPTLQCGSYSFSCGNGRCVPQYYQCDGVDDCHDNSDEQNCGSLNKYLWFFSFYCANGQCI 1082
Query: 207 PG------------------------------QFSCGMGKCIPESWKCDGFVDCLEDGSD 236
G F+C +CIP W CD DC DGSD
Sbjct: 1083 XGHWHCDTHMTVFDGSDELHCPTQRPSHACXTHFTCDNRRCIPRIWLCDTDNDC-GDGSD 1141
Query: 237 EPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
E N T C Q QC +CI ++CD + DC +D DE D + C +
Sbjct: 1142 EKNCTFTGTCEPRQFQCP-DHRCIDPFYVCDGDKDC-----IDGADEH-DCIYNCSATEF 1194
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C +CI + CD DC+ D++DE + +CH NE +C S CV
Sbjct: 1195 XCLSGDQCISTYYQCDGVFDCN-----DHSDE--ADCPTRPPGMCHQNEFQCQSDGSCVP 1247
Query: 356 LSKFCDGKPDCSNGEDE------------------------GPFCNNKADCENLKCSHKC 391
+ CDG DC++G DE C+ DC ++ C
Sbjct: 1248 HNWECDGHVDCADGSDEHHRCPARTCPPSLFRCDNGNCVYRAWICDGDNDCRDMSDERDC 1307
Query: 392 SPTPRGAMCFCPAGQN--PNKTQCVD--------------ADECLI---------DGSCD 426
P CP+ Q P + CV+ ADE + + C
Sbjct: 1308 PTQPFR----CPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCT 1363
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C+C GY L D K+C +N
Sbjct: 1364 HECIQGPFGAQCTCPIGYQLANDSKTCEDIN 1394
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH NE +C S CV + CDG DC++G DE C A C P F C G C+ +W
Sbjct: 1231 MCHQNEFQCQSDGSCVPHNWECDGHVDCADGSDEHHRCPARTCPPSLFRCDNGNCVYRAW 1290
Query: 223 KCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC D SDE + T +C + Q QC C+ + +CD DC
Sbjct: 1291 ICDGDNDC-RDMSDERDCPTQPFRCPSWQWQCPGHSICVNLSKVCDNSADC 1340
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 103/278 (37%), Gaps = 44/278 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R+P+V+ N+ WP+ L +DY + LYW D++L +E + G++ V+
Sbjct: 2531 NAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCTLTGTNREVI 2590
Query: 165 C----HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
HP + +Q + + + +N D G M +P+
Sbjct: 2591 VSTALHPFAMTV--FDQHIYWTDWNTRSIYRANKYD-----------GSDQIVMIMNLPQ 2637
Query: 221 S------WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
W C+ + C H C G +L + C
Sbjct: 2638 RPMDIHVWAKSKQQQCMNPCNQFNGGCSHICAPGPAGAECQCPSEGRWYLANNNKHC--- 2694
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
IVDN F C NG CI W CD + DC D +DE
Sbjct: 2695 -IVDNGTRCDTGFFTCLNGH--------CISERWKCDNDNDCG-----DGSDELESVCAF 2740
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H C P CG+ +CV CD DC + DE
Sbjct: 2741 HT---CQPTAFTCGNG-RCVPYHYRCDHYNDCGDNSDE 2774
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++++ WP+ L IDY N D +YW DS N +ES++ DG+ ++
Sbjct: 4211 KIECAWMDGQQRQMLVSEDLGWPTGLSIDYLNNDRIYWSDSKENIIESMKPDGTDRTIVL 4270
Query: 166 H 166
H
Sbjct: 4271 H 4271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR L+ + WP+ + +D LYW DS + +E+V DG +
Sbjct: 537 DPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYWVDSRFDYIETVTYDGLQRRTV 596
Query: 165 CHPNEL 170
H L
Sbjct: 597 AHGGSL 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 116/297 (39%), Gaps = 73/297 (24%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C N + +C S +CIP +W CD+ +DC+ D +DE
Sbjct: 2866 CTNSEFRCT-SGRCIPAHWYCDQGIDCA-----DGSDE---------------------- 2897
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMH------ 114
+ C Q + S+ + RC + +W D ++ D+R A +
Sbjct: 2898 --PASCVPQMRTCSNDQFRCDDDRCIPATWICDGDNDCGDMSDEDQRHNCANRNCTAAEF 2955
Query: 115 --GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
NR PL + I P + V D + D D H N C NE C
Sbjct: 2956 TCANNRPPL-RRCI--PRAWVCDGDADCSDALDEHQNCTRRS----------CTENEFTC 3002
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S+ C+ + CD + DC + DE C QF+C G+CI +++ CDG DC
Sbjct: 3003 -SNGLCIRNTYRCDRRNDCGDSSDERGCIYEPCQQHQFTCQNGRCISKAYICDGDNDC-- 3059
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE-------EMDCSTDDIVDNTDE 282
DE + H C + C+ PH++ CD ++ DD +DN+DE
Sbjct: 3060 --GDESDELEHLCSTPEATCS------PHHFKCDNGNCIELVKVCNRLDDCLDNSDE 3108
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+EKA M G R+ ++ I WP+ L IDY +LY+ D++L+ ++ +G +
Sbjct: 1580 RIEKASMDGNMRTVIINNKIYWPNGLSIDYPNKLLYFADAYLDYIDFCDYNGNNRRQVVA 1639
Query: 160 HNAVLCHPNEL 170
+ +L HP+ L
Sbjct: 1640 SDLILQHPHGL 1650
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL------NGTHTLALEFNHRNQSL--CFIQQ 74
+ CD S+ + + D YF+ ++ NG +A+++ N F+ +
Sbjct: 2112 YWCDFSSTVSSQNAIRKIKPD-GSYFRNVITNGIGRNGIRGIAIDWVAGNLYFTNAFLTE 2170
Query: 75 QNVSSVRLRCAQINDLL-NSWDLPAPEI------------FPLDERLEKAGMHGENRSPL 121
+ +RL LL + D+P + + + ++E+A + NR+ L
Sbjct: 2171 TFIEVLRLNTTYRRVLLKTTIDMPRHIVVDPKNRYLFWADYGQNPKIERAFLDCTNRTVL 2230
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
V++ I P L ID++ +YW D L+ + ++ DG ++
Sbjct: 2231 VSEGIVTPRGLAIDHSNGYIYWVDDSLDMIARIQPDGGDVEIV 2273
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + + S P G + A Q + C + G C+Q C +H
Sbjct: 630 NKFSESNPQVIYHSSLRPYGVTVYHAARQPFVRNPCGSNN-----GGCEQVCVLSHKTDN 684
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 685 DGLGYRCRCILGFDLHVDGRHCVAVR------QFLLFSSQMAVRGIPFNLS 729
>gi|196008921|ref|XP_002114326.1| hypothetical protein TRIADDRAFT_27379 [Trichoplax adhaerens]
gi|190583345|gb|EDV23416.1| hypothetical protein TRIADDRAFT_27379 [Trichoplax adhaerens]
Length = 718
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 155/328 (47%), Gaps = 25/328 (7%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C P + C +S C+ + CD DC + DE N C P F C G CI +S
Sbjct: 114 VATCSPQQFTCNNS-HCINSAWRCDNDNDCGDNSDEWNCPNKTCGPELFQCSSGDCIKKS 172
Query: 222 WKCDGFVDCLEDGSDEPNTCI----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC DGSDE N H C G+ QC + +CI W CD DC+
Sbjct: 173 WLCDGERDCT-DGSDEKNCSTSRPKHTCRAGEFQCK-NWECIKSEWRCDGSTDCT----- 225
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C +GQ +C+ + CI + +CD DC+ ++ DE +
Sbjct: 226 DGSDELGCNKTTCKSGQFRCS-AHICIDAHNVCDGISDCA-----NSRDEQNCTTPTPPN 279
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPR 396
+ C+ ++ C ++ C+++ C+GK DC + DE CN N+ N CS C T
Sbjct: 280 LTCNSSQFTCHTNKSCISMKLVCNGKFDCEDKSDEPATCNINECSEYNGHCSQNCVNTKV 339
Query: 397 GAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G C C G + + C+D +EC I C Q C NT SY C+C +GY L D KSC
Sbjct: 340 GYYCACNPGYTLDTDGRTCLDINECNISNPCSQMCENTKGSYKCTCADGYRLDADFKSCK 399
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A+ EP + F++ DI R + GS
Sbjct: 400 ALG---PEPV-LFFANRRDIHRFTIKGS 423
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 102/207 (49%), Gaps = 23/207 (11%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWKCDGF 227
+ CG+ +C+ + CDG DC + DE C P +F+C GKCI SW CDG
Sbjct: 1 QFACGNG-RCIPIDWRCDGTDDCKDNSDETNCAQVTCHPNNEFTCNDGKCITTSWVCDGQ 59
Query: 228 VDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWD 285
DC+ DGSDE + C+ + C + C + CI +++CD+ DC ++ DE +
Sbjct: 60 NDCI-DGSDEGSHCLTKTCTPDEFSCG-NGVCIKRDYVCDQVDDCG-----NSADERNCT 112
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C Q C S CI W CD + DC DN+DE ++ C P
Sbjct: 113 KVATCSPQQFTCNNS-HCINSAWRCDNDNDCG-----DNSDE-----WNCPNKTCGPELF 161
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C SS C+ S CDG+ DC++G DE
Sbjct: 162 QC-SSGDCIKKSWLCDGERDCTDGSDE 187
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A + G R LV+ N++WP+ L IDY Q +YW D + +ES +DGS V+
Sbjct: 547 KIERAKLDGTQRQILVSTNVEWPNGLTIDYPQRKMYWVDGKHHHIESANLDGSGRRVI 604
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 10/79 (12%)
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP +W CD TDD DN+DE + V CHPN + +C+ S CD
Sbjct: 8 RCIPIDWRCD-----GTDDCKDNSDE-----TNCAQVTCHPNNEFTCNDGKCITTSWVCD 57
Query: 362 GKPDCSNGEDEGPFCNNKA 380
G+ DC +G DEG C K
Sbjct: 58 GQNDCIDGSDEGSHCLTKT 76
>gi|195478517|ref|XP_002100545.1| GE17125 [Drosophila yakuba]
gi|194188069|gb|EDX01653.1| GE17125 [Drosophila yakuba]
Length = 1964
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 166/367 (45%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C G F CG G CI +W
Sbjct: 1104 CHVHQHSC-DNGKCVDSSLVCDGTNDCGDNSDE-MLCEATSRCEQGMFQCGSGSCIAGTW 1161
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C H+ + L +C+ + +CD +E++C T
Sbjct: 1162 ECDGRIDC-SDGSDEHDKCAHRSCPPDMHRCLLGQCLDRSLVCDGHNDCGDKSDELNCGT 1220
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D+F +C G+ +C +
Sbjct: 1221 DSSTVNISCAEDQFQCTSNLKICLPSAVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1280
Query: 302 KCIPHNWLCDEEMDC--STDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC ++D++ N ++ + +S ++ C P+ C +CV
Sbjct: 1281 QCIRREFRCDGQKDCGDASDELSCELEKGNRNQSQIQPWSTSSRACRPHLFDC-QDGECV 1339
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1340 DLSRVCNNFPDCANGHDEGPKCATACRSGSGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1399
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1400 KSCSDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1455
Query: 471 TVDIRRI 477
++R +
Sbjct: 1456 FNEVRNL 1462
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/333 (31%), Positives = 150/333 (45%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC +G DE C P F C G C+ C+G +C G
Sbjct: 88 CILQAKMCDGRGDCKDGSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 146
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD +DC+ +D++
Sbjct: 147 EDELNCPVRPGFRFGDTAHRMRNCSKYEFTCQQDRTCIPIDFMCDGRVDCTDKSDEVAGC 206
Query: 280 TDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 207 KQAEATCSVEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDEKG------C 248
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--SHKCS 392
LC P + C + C+ LS+ CDG DCS+G DE FC++K DCE KC KC
Sbjct: 249 LNLCEPQKGKFLCRNRETCLVLSEVCDGHSDCSDGSDETEFCHSKPDCETKKCPLGAKCH 308
Query: 393 -PTPRGAMCFCPAG--QNPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
+ GA C CP G Q + +C D DEC D C Q C NT Y C C GY L
Sbjct: 309 MMSTSGAECICPKGFRQAKFEDKCEDIDECKERDDLCSQGCENTSGGYQCVCDAGYLLDK 368
Query: 449 DGKSCTA-VNVPQDEPASIIFSSTVDIRRIHLN 480
D ++C A V+ ++ +++++ + I +HL
Sbjct: 369 DNRTCRAIVHGSIEQQPLLLYTTQMTIMGMHLR 401
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 113/236 (47%), Gaps = 39/236 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--------CTPGQFSCGMG-KCIP 219
E RC S +C+ ++ C+G+ DC + DE C+AE C+P QF+C G +C+
Sbjct: 1018 EFRC-HSGECLTMNHRCNGRRDCVDNSDE-MNCDAEHRRKPKVHCSPSQFACHSGEQCVD 1075
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCST 273
+ +CD DC D SDE + + F+ +C + + KC+ + +CD DC
Sbjct: 1076 KERRCDNRKDC-NDHSDEQHC---EKFDKTKKCHVHQHSCDNGKCVDSSLVCDGTNDCG- 1130
Query: 274 DDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DE + +C G QC S CI W CD +DCS D +DE DK
Sbjct: 1131 ----DNSDEMLCEATSRCEQGMFQCG-SGSCIAGTWECDGRIDCS-----DGSDEH-DK- 1178
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+H + C P+ RC QC+ S CDG DC + DE C + N+ C+
Sbjct: 1179 CAHRS--CPPDMHRC-LLGQCLDRSLVCDGHNDCGDKSDE-LNCGTDSSTVNISCA 1230
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 528 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 587
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 588 MLKHPYGL 595
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 13/132 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCG 213
D +H C E C C+ + CDG+ DC++ DE C A C+ C
Sbjct: 162 DTAHRMRNCSKYEFTCQQDRTCIPIDFMCDGRVDCTDKSDEVAGCKQAEATCSVEGHLCA 221
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 222 NGRCLRRKQWVCDGVDDC-GDGSDEKG-CLNLCEPQKGKFLCRNRETCLVLSEVCDGHSD 279
Query: 271 CSTDDIVDNTDE 282
CS D +DE
Sbjct: 280 CS-----DGSDE 286
>gi|224056122|ref|XP_002194404.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Taeniopygia guttata]
Length = 4577
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 111/205 (54%), Gaps = 8/205 (3%)
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+E +++ C G+ C C+ +WLCD E DC D++DE D + C
Sbjct: 2 EEGFEEHPLCDVGEFLCHDGITCVSWHWLCDGEPDCP-----DDSDESLDTCPEESDFKC 56
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
PN + C +N+C+ LS+ C+G DCS+G DEG C C+ + C H+C+ T G
Sbjct: 57 SPNFISCIGTNKCIHLSQLCNGVYDCSDGYDEGVHCRELLPRCQQMNCQHRCAITRNGTR 116
Query: 400 CFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C+C G + + C D +EC + GSC Q C NT SY CSC EGY L+PD KSC A N
Sbjct: 117 CYCRDGYETSGDGRSCTDVNECDMYGSCSQMCVNTDGSYTCSCVEGYVLQPDNKSCKAKN 176
Query: 458 VPQDEPASIIFSSTVDIRRIHLNGS 482
P D P ++ +S I ++LNGS
Sbjct: 177 KPADRPPLLLVASPEMIEVLYLNGS 201
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 160/375 (42%), Gaps = 78/375 (20%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA------------------ 203
A C N+ CG+ +C+ S CD + DC +G DE C
Sbjct: 903 ARTCQVNQFSCGNG-RCIPTSWLCDREDDCGDGTDEMTSCEFPTCEPLTQFICRNGRCIS 961
Query: 204 ----------------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT- 240
C+ QF C G+CIP W CDG DC D SDE T
Sbjct: 962 SKWLCDSDDDCGDGSDELGCVHSCSADQFRCQNGRCIPGHWACDGDNDC-GDFSDETKTN 1020
Query: 241 -------CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC- 290
+C + QC+ C+P W CD E DC D +DE C
Sbjct: 1021 CSREETPSPGRCSGREFQCSPDGSCVPELWRCDGEKDCE-----DGSDEKGCNGTLRACD 1075
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS- 349
+ C + +CI WLCD ++DC D +DED + LC P + C +
Sbjct: 1076 EKTKFSCKSTGRCISKAWLCDGDIDCE-----DQSDED-----NCEGYLCGPPKYPCAND 1125
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM-CFCPAGQN- 407
++ C+ K C+G+ DC +G DEG C+ + N CSH+CS P G + C CPAG N
Sbjct: 1126 TSICLQPEKLCNGRRDCPDGSDEGDLCD-ECSLNNGGCSHQCSVVPGGRIVCSCPAGFNL 1184
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
NKT C D C C Q C + CSC EG+ L DG+SC + + + A
Sbjct: 1185 TTDNKT-CEIMDYCSKHLKCSQVCEQHKNTVKCSCYEGWKLSKDGESCVSTDPFE---AF 1240
Query: 466 IIFSSTVDIRRIHLN 480
IIFS +IR+I L+
Sbjct: 1241 IIFSIRHEIRKIDLH 1255
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 159/375 (42%), Gaps = 70/375 (18%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2656 QNKPTCEENYFGC-PSGRCILTTWLCDGQKDCEDGVDE-LHCDSSCSWNQFACSANKCIS 2713
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE + C C S C+P +WLCD E DC
Sbjct: 2714 KQWTCDGEDDC-GDGLDESDAVCGSVTCAADTFSCLGSHACVPQHWLCDGERDCPNGSDE 2772
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F +C G+ CA
Sbjct: 2773 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESLECGYRRCRPGEFTCA 2832
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQ 352
+ + W CD + DC D++DE + C +E C SS +
Sbjct: 2833 DGRCLLNSQWQCDGDFDCP-----DHSDE------APINAKCKSSEQSCNSSFFMCKNGK 2881
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNP 408
C+ S+ CD K DCS+G DE N+ + + CS C P G C C G ++
Sbjct: 2882 CIPQSEVCDKKEDCSDGSDEKSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFLLKDD 2941
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASII 467
KT CVD DEC C Q C NT+ +Y C C EGY +PD C +++ DE +I
Sbjct: 2942 GKT-CVDIDECSSGFPCSQQCINTYGTYKCLCAEGYETQPDNPNGCKSLS---DEEPFLI 2997
Query: 468 FSSTVDIRRIHLNGS 482
+ +IR+I +GS
Sbjct: 2998 LADHHEIRKISTDGS 3012
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 148/360 (41%), Gaps = 76/360 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC G+DE
Sbjct: 3511 FWCDGDYDCADGS--DERYCETGCSRDQFQC-SNGQCISAKWKCDGHEDCKLGDDEKNCE 3567
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G +DC DGSDE + C+ +C Q +C CI
Sbjct: 3568 PASPTCSSSEYVCASGGCISASLKCNGELDC-ADGSDEMD-CVAECKEDQFRCRNKAYCI 3625
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3626 PVRWLCDGIHDC-----VDGSDEE-----NCDQGGNICRADEFLCNNSLCKLHFWVCDGE 3675
Query: 314 MDCS--------------------------------------TDDIVDNTDEDWDKYFSH 335
DC DD DN+DED ++
Sbjct: 3676 DDCGDNSDEVAEMCVKFPCPPTRPYRCRNNRVCLRPEQICNEVDDCGDNSDEDHCDKITY 3735
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP-- 393
A C +E C ++ +C+ + CD DC +G DE + K C +P
Sbjct: 3736 KARPCKKDEFAC-NNKKCIPMELQCDWFDDCGDGSDEQ---DCKISIAEYTCEDNVNPCG 3791
Query: 394 -------TPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
T +C C G +N QC D +EC++ G+C Q C N SY C+C + Y
Sbjct: 3792 DDAFCNQTKSSLLCQCKPGFQRNRRNRQCEDINECMVFGTCSQHCHNLKGSYRCACEKNY 3851
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3296 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPAECPEFRCQPGRFQCGTGLCALPAFI 3354
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3355 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG-----DEEDER 3408
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3409 DCPENSCSPDHFQCKTTKHCISKLWVCDEDPDCADGSDEANCDKK----------TCGPH 3458
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DC + DE
Sbjct: 3459 EFQC-KNNNCIPDHWRCDSQNDCGDNSDE 3486
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 97/201 (48%), Gaps = 20/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE +C C+ QF C G+CI WKCDG DC +
Sbjct: 3502 ANGDCVSARFWCDGDYDCADGSDE-RYCETGCSRDQFQCSNGQCISAKWKCDGHEDC-KL 3559
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E+DC+ D +DE D +C
Sbjct: 3560 GDDEKNCEPASPTCSSSEYVCA-SGGCISASLKCNGELDCA-----DGSDE-MDCVAECK 3612
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3613 EDQFRCRNKAYCIPVRWLCDGIHDC-----VDGSDEE---NCDQGGNICRADEFLCNNS- 3663
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
C CDG+ DC + DE
Sbjct: 3664 LCKLHFWVCDGEDDCGDNSDE 3684
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 32/215 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3415 CSPDHFQCKTTKHCISKLWVCDEDPDCADGSDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3474
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE +
Sbjct: 3475 DSQNDC-GDNSDEENCKPQTCTLKDFPCA-NGDCVSARFWCDGDYDCA-----DGSDERY 3527
Query: 285 -------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D+F QC NGQ CI W CD DC D N + +
Sbjct: 3528 CETGCSRDQF-QCSNGQ--------CISAKWKCDGHEDCKLGDDEKNCEP--------AS 3570
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E C S C++ S C+G+ DC++G DE
Sbjct: 3571 PTCSSSEYVCASGG-CISASLKCNGELDCADGSDE 3604
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3336 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPINLR 3394
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3395 CNGQDDC-GDEEDERDCPENSCSPDHFQCKTTKHCISKLWVCDEDPDCA-----DGSDEA 3448
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DC DN+DE+ + C
Sbjct: 3449 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCG-----DNSDEE-----NCKPQTCTLK 3497
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ C + + CV+ +CDG DC++G DE +C + +CS+
Sbjct: 3498 DFPCANGD-CVSARFWCDGDYDCADGSDE-RYCETGCSRDQFQCSN 3541
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3374 VCLSGQFKCTKNQKCIPINLRCNGQDDCGDEEDERDCPENSCSPDHFQCKTTKHCISKLW 3433
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC DGSDE N C + QC + CIP +W CD + DC DN+DE
Sbjct: 3434 VCDEDPDC-ADGSDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCG-----DNSDE 3486
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3487 ENCKPQTCTLKDFPCA-NGDCVSARFWCDGDYDCA-----DGSDE------RYCETGCSR 3534
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC G+DE
Sbjct: 3535 DQFQC-SNGQCISAKWKCDGHEDCKLGDDE 3563
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV K CDG DC + DE ++ C P +F C G C+ +S +C+ +DC D
Sbjct: 2539 SNRRCVPSDKVCDGANDCGDNSDEFDCKDSACAPAEFRCADGVCVGKSAQCNQIIDC-AD 2597
Query: 234 GSDEPNTCIHQCF---------NGQVQCALSKKCIPHNWLCDEEMDCS--TDDI---VDN 279
SDE N C +G + C + CI W+CD DC TD++ V N
Sbjct: 2598 ASDEKNCNNTNCAYFYKLGIKSSGFISCNSTSLCILPEWICDGSNDCGDYTDELKCPVQN 2657
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ + C +G +CI WLCD + DC D DE H
Sbjct: 2658 KPTCEENYFGCPSG--------RCILTTWLCDGQKDCE-----DGVDE------LHCDSS 2698
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC--SHKCSPT- 394
C N+ C S+N+C++ CDG+ DC +G DE C + C SH C P
Sbjct: 2699 CSWNQFAC-SANKCISKQWTCDGEDDCGDGLDESDAVCGSVTCAADTFSCLGSHACVPQH 2757
Query: 395 ---------PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2758 WLCDGERDCPNGSDELSTAGCAPNNT 2783
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 127/337 (37%), Gaps = 93/337 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G +S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3134 IGRVGMDGSRQSVVIETQISRPMALTIDYVNHRLYWADE--NHIEFSDMDGSHRHKV--P 3189
Query: 168 NELRCGSSNQCVALSKF------CDGKPDC------SNGEDEGPFCNAECTPGQFSCGMG 215
N+ G +AL+ F DGK ++G D N+ T
Sbjct: 3190 NQDIPG----VIALTLFEDYIYWTDGKTKSLSRAHKTSGSDRLSLINSWHTITDIQVYHS 3245
Query: 216 KCIPESWKCDGFVDCLEDG------------------------SDEPNTCIHQCFNGQVQ 251
P+ + V L +G + + TC+ C Q +
Sbjct: 3246 YRQPDVSR---HVCTLNNGGCSHLCLLAPDQLHSCACPTNFYLAADNRTCLSNCTASQFR 3302
Query: 252 CALSKKCIPHNWLCDEEMDC-----------------------------------STDDI 276
C + KCIP W CD DC +D
Sbjct: 3303 CK-TDKCIPFWWKCDTVDDCGDGSDEPAECPEFRCQPGRFQCGTGLCALPAFICDGENDC 3361
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE H C +GQ +C ++KCIP N C+ + DC DE+ ++ N
Sbjct: 3362 GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG--------DEEDERDCPEN 3413
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ C P+ +C ++ C++ CD PDC++G DE
Sbjct: 3414 S--CSPDHFQCKTTKHCISKLWVCDEDPDCADGSDEA 3448
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 92/216 (42%), Gaps = 27/216 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ +C+ CDG C + DE F N C G C +C+P CD
Sbjct: 2493 SEFECGNG-ECIDYQLTCDGIAHCKDKSDEKLFYCENRGCRKGFKPCSNRRCVPSDKVCD 2551
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-- 283
G DC D SDE + C + +CA C+ + C++ +DC+ D +DE
Sbjct: 2552 GANDC-GDNSDEFDCKDSACAPAEFRCA-DGVCVGKSAQCNQIIDCA-----DASDEKNC 2604
Query: 284 -------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ K +G + C + CI W+CD DC D TDE K N
Sbjct: 2605 NNTNCAYFYKLGIKSSGFISCNSTSLCILPEWICDGSNDCG-----DYTDE--LKCPVQN 2657
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C N C S +C+ + CDG+ DC +G DE
Sbjct: 2658 KPTCEENYFGC-PSGRCILTTWLCDGQKDCEDGVDE 2692
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G +R VT + WP+ L +DY ++LY
Sbjct: 630 VVDPVNGWMYWTDWEEDEIDASVGRIEKAWMDGYSRQVFVTSKMLWPNGLTLDYRANVLY 689
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E + ++G+ V+ + +L
Sbjct: 690 WCDAYYDHIERIYLNGTDRKVVYNGKDL 717
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALS 255
EG C QF C +CI E W+CDG DCL+ + C H C + Q +C +
Sbjct: 816 EGEVLPQLCKAEQFQCSNKRCIQERWRCDGDDDCLDGSDEHSEICFNHSCPDDQFKCQ-N 874
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+CIP WLCD DC +N DE C Q C + +CIP +WLCD E
Sbjct: 875 NRCIPKRWLCDGANDCG-----NNEDESNKTCAARTCQVNQFSCG-NGRCIPTSWLCDRE 928
Query: 314 MDCSTDDIVDNTDE 327
DC D TDE
Sbjct: 929 DDCG-----DGTDE 937
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G+CI CDG C + ++ C ++ C G C+ +++C+P + +CD
Sbjct: 2494 EFECGNGECIDYQLTCDGIAHCKDKSDEKLFYCENRGCRKGFKPCS-NRRCVPSDKVCDG 2552
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC DN+DE K C + +CA C+ + C++ +DC+ N +
Sbjct: 2553 ANDCG-----DNSDEFDCKDSACAPAEFRCA-DGVCVGKSAQCNQIIDCADASDEKNCNN 2606
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
YF + + + C S++ C+ CDG DC + DE LKC
Sbjct: 2607 TNCAYF-YKLGIKSSGFISCNSTSLCILPEWICDGSNDCGDYTDE------------LKC 2653
Query: 388 SHKCSPTPRGAMCFCPAGQ 406
+ PT CP+G+
Sbjct: 2654 PVQNKPTCEENYFGCPSGR 2672
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 21/161 (13%)
Query: 28 EMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQI 87
++ CS + E+W + L+ +A+++ N F +VS C+Q
Sbjct: 237 QLKCSRIPKAATSPEEWAVSIAQNLHNVQQIAMDWITGN----FYFVDHVSGRIFVCSQN 292
Query: 88 NDL---LNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPS 130
+ L DL P +D ++E+ M G NR+ +V I+ P+
Sbjct: 293 GSVCVTLIELDLSNPRAIAVDPTSGKLFFTDYGNAAKVERCDMDGTNRTWIVDSKIEQPT 352
Query: 131 SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
+L +D +YW D +L TVE V G + ++R
Sbjct: 353 ALALDLINKYVYWLDIYLETVEVVDYQGRRRQTITKGRQIR 393
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E++ M G R LV KN+Q P+ LV+D L+W D L+ + SV DGS + V
Sbjct: 4030 IEESSMDGTLRRILVQKNLQRPTGLVVDQFSQRLFWADFELSVIGSVLFDGSDSVVSVST 4089
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 4090 KQGLLHPHRI 4099
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ +A + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ GS VL
Sbjct: 2000 IGRAHLDGSEKVVLVSLGIAWPNGISIDYEENKLYWCDARTDKIERIDLESGGSREIVLS 2059
Query: 166 HPN 168
N
Sbjct: 2060 GSN 2062
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFS 211
+G LC E C CV+ CDG+PDC + DE + +C+P S
Sbjct: 3 EGFEEHPLCDVGEFLCHDGITCVSWHWLCDGEPDCPDDSDESLDTCPEESDFKCSPNFIS 62
Query: 212 C-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
C G KCI S C+G DC DG DE C Q N Q +CA+++
Sbjct: 63 CIGTNKCIHLSQLCNGVYDC-SDGYDEGVHCRELLPRCQQMNCQHRCAITR 112
>gi|301620806|ref|XP_002939758.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1-like [Xenopus (Silurana)
tropicalis]
Length = 4607
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/319 (33%), Positives = 152/319 (47%), Gaps = 30/319 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+S +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 1064 NSGRCININWRCDNDNDCGDNSDEDG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1122
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+ C +Q C + QC L CIP+ W CD + DC D D + D +
Sbjct: 1123 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPNRWRCDGDTDCM--DTSDEKNCDGET 1180
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
N + C S +CI W+CD + DC DN+DE+ + +++C
Sbjct: 1181 RPCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLVCKSPSHT 1230
Query: 347 CGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPA 404
C ++ C+ K CDG DC +G DEG C ++ N CSH C+ P G +C CP
Sbjct: 1231 CANNTSICLPPEKLCDGNDDCGDGSDEGDLC-DQCSLNNGGCSHNCTVAPGEGIVCSCPL 1289
Query: 405 GQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G P NKT C C C Q C + CSC EG+ L D +SC +++ +
Sbjct: 1290 GMEPGPDNKT-CQIQSYCAKHLRCSQRCEQEKNTVKCSCYEGWMLEADKESCRSLDPFK- 1347
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI LN
Sbjct: 1348 --PFIIFSNRHEIRRIDLN 1364
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + C PNE C
Sbjct: 110 CSPKQFACKDQVTCISKGWRCDGEKDCP-----DGSDEAPEICPQSKISKCQPNEHNCLG 164
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQN- 407
+ C+ + K C+G DCS+G DEGPFC A +C L C H C+ T G +C+C
Sbjct: 165 TEICIPMGKLCNGHHDCSDGSDEGPFCREYAHNCTELGCQHHCARTVTGPVCYCNTSYQL 224
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D DEC + G+C QTC N SY CSC EGY L+PD KSC A N P D P +
Sbjct: 225 VEDGKTCKDFDECTVYGTCSQTCFNMEGSYSCSCVEGYLLQPDNKSCKAKNEPVDRPTIL 284
Query: 467 IFSSTVDIRRIHLNGS 482
+ +ST +I +LNG+
Sbjct: 285 LIASTQNILATYLNGA 300
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 153/359 (42%), Gaps = 71/359 (19%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ +S CD + DC NG DE C+ CT QF C +CI + W CDG DC D SD
Sbjct: 2781 HCIPMSWTCDKESDCENGADE-MHCDKFCTSMQFECSNHRCISKHWVCDGSDDC-GDKSD 2838
Query: 237 EPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK---FHQCFN 292
E C + C +C + CIP WLCD ++DC D DE + F+ +
Sbjct: 2839 EGAICQSNTCSPESFRCPSTHVCIPRRWLCDGDIDCQ-----DGADESVNVGCLFNNTCD 2893
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ +++CIP ++CD + DCS D +DE + + C P+E RC +
Sbjct: 2894 AKEFMCQNRQCIPKQFVCDHDADCS-----DGSDESPECEYP----TCGPDEFRCANGRC 2944
Query: 353 CVALSKFCDGKPDCSNGEDEGP-----------------------------FCNNKADCE 383
V CDG+ DC + DE P C+N DC
Sbjct: 2945 LVNKQWECDGEFDCHDKSDEAPKNPRCTNTESKCNETFFLCKNGTCIPDNLLCDNNDDCG 3004
Query: 384 NLK-----------------CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDG 423
+ CS +C G C C G ++ KT CVD DEC
Sbjct: 3005 DGSDELNCFINECLNRKLSGCSQECEDQKIGYKCRCRPGFRLKDDGKT-CVDMDECTTTY 3063
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C Q C NT SY C C EGY R + + V+ DEP +IF++ +R++ L G+
Sbjct: 3064 PCSQWCLNTLGSYRCLCIEGYEARDNNSNSCKVSASADEPF-LIFANRYYLRKLSLGGT 3121
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 106/346 (30%), Positives = 148/346 (42%), Gaps = 75/346 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3601 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEETCTPRPCSESEFSCANGRCIAGRWKC 3659
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC+ DGSDE + C +C Q QC + CIPH W CD + DC +D +DE+
Sbjct: 3660 DGDHDCI-DGSDEKD-CKVRCEPDQFQCN-NGHCIPHRWHCDADADC-----MDGSDEEN 3711
Query: 284 -WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ C + QC + C P W CD E DC DN+DE ++ C P
Sbjct: 3712 CHNTVRTCPMDEFQCH-NTLCKPLAWKCDGEDDCG-----DNSDEKPEECLK---FTCPP 3762
Query: 343 -NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----------DCENLKC---- 387
+ RC + C+++++ CDG +C +G DE C+ K C+N KC
Sbjct: 3763 FRQFRCRNDRVCLSMARVCDGIDNCGDGTDE-EHCDTKPKSCDMEKEEFQCKNNKCISSS 3821
Query: 388 ------------------------------------SHKCSPTPRGAMCFCPAG--QNPN 409
KC T C C G + P
Sbjct: 3822 RRCDLFDDCGDGSDEESCYPDLKINGCHGNSTICGEEMKCVHTQTTVYCTCQNGFQKIPG 3881
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C D +ECL G+C Q C NT S++C+C + + ++ SC A
Sbjct: 3882 SNACKDINECLTFGTCSQICNNTKGSHMCTCAKNF-IKSTNHSCKA 3926
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 146/363 (40%), Gaps = 101/363 (27%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
++EKA M G NR+ VT K + WP+ L ID ILYW D+ + +E + +GS
Sbjct: 761 KIEKAWMDGSNRNVFVTSKTVLWPNGLSIDIPNKILYWVDAFYDRIEMIYTNGSSRKPVY 820
Query: 160 ------HNAVLCHPN------ELRCGS--------------------------------- 174
H LCH E R GS
Sbjct: 821 EGQELNHAFGLCHYGSYLFWTEYRSGSIYRLDQVSKTVTLLRNERPPIFEIRMYDAQQQQ 880
Query: 175 --SNQCVALSKFCD-------GKPDCSNGEDE-----GPFCNA--------ECTPGQFSC 212
SN C + C G C+ ED+ G C A +C PG+F+C
Sbjct: 881 VGSNACRVNNGGCSSLCLAVPGSRQCACAEDQILDDDGVTCKANPSYIPPPQCQPGEFAC 940
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC
Sbjct: 941 KNSRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDC 999
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+ N+ C + Q CA S +CIP +W CD + DC D +DE
Sbjct: 1000 GNSEDESNSTC---SARTCPSNQFSCA-SGRCIPLSWTCDLDDDCG-----DRSDESSKC 1050
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
+ C P +S +C+ ++ CD DC + DE CSH C
Sbjct: 1051 AYP----TCFPLTQFTCNSGRCININWRCDNDNDCGDNSDED------------GCSHSC 1094
Query: 392 SPT 394
S T
Sbjct: 1095 SST 1097
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 134/271 (49%), Gaps = 34/271 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +G+DE C P QF C + K CIP W
Sbjct: 3477 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGDDEKDCPEVTCAPNQFQCAVNKRCIPRVW 3536
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ D SDEP+ C C + +C S +CIP W CD E DC D D
Sbjct: 3537 VCDRDNDCV-DASDEPDNCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DSSDEPK 3593
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ + C
Sbjct: 3594 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----TCTPRPCS 3641
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
+E C ++ +C+A CDG DC +G DE C + + + +C++ C
Sbjct: 3642 ESEFSC-ANGRCIAGRWKCDGDHDCIDGSDEKD-CKVRCEPDQFQCNN--------GHCI 3691
Query: 402 CPAGQNPNKTQCVDADECLIDGSCDQTCTNT 432
P++ C DAD +DGS ++ C NT
Sbjct: 3692 ------PHRWHC-DADADCMDGSDEENCHNT 3715
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 141/376 (37%), Gaps = 95/376 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG-QFSCGMGKCIPESW 222
C P E C +S +C+ CDG DC + DE P C+ P +F C +CIP W
Sbjct: 933 CQPGEFACKNS-RCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCENNRCIPNRW 991
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------- 272
CDG DC + +TC C + Q CA S +CIP +W CD + DC
Sbjct: 992 LCDGDNDCGNSEDESNSTCSARTCPSNQFSCA-SGRCIPLSWTCDLDDDCGDRSDESSKC 1050
Query: 273 ---------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D DN+DED H C + Q +C S +CIP
Sbjct: 1051 AYPTCFPLTQFTCNSGRCININWRCDNDNDCGDNSDED-GCSHSCSSTQFKCN-SGRCIP 1108
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D D T + + CH +E +C C+ CDG D
Sbjct: 1109 EHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPNRWRCDGDTD 1166
Query: 366 CSNGEDE--------------------GPFCNNKA----------------DCENLKC-- 387
C + DE C +KA +CE+L C
Sbjct: 1167 CMDTSDEKNCDGETRPCDPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCESLVCKS 1226
Query: 388 -SHKCSPTPRGAMCFCPAGQNPNKTQCVDA-------DEC-LIDGSCDQTCTNT-HLSYV 437
SH C+ ++C P C D D+C L +G C CT V
Sbjct: 1227 PSHTCANNT--SICLPPEKLCDGNDDCGDGSDEGDLCDQCSLNNGGCSHNCTVAPGEGIV 1284
Query: 438 CSCTEGYTLRPDGKSC 453
CSC G PD K+C
Sbjct: 1285 CSCPLGMEPGPDNKTC 1300
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 134/338 (39%), Gaps = 73/338 (21%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVI--DY---NQDILYWC 144
+ D I+ D R ++ A + G NR +++++I +L + DY Q I C
Sbjct: 3269 TLDYVNSRIYWADAREDYIQFANLDGTNRHTVISQDIPHIFALTLFEDYLGCTQMIAISC 3328
Query: 145 DSHLN-------TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN---- 193
+L + ++ S V HP ++ G + LS K C
Sbjct: 3329 KRNLKGKVIVCEXIVNINECFSLVPVPNHPCKMNNGGCSNLCLLSPNGGYKCACPTNFYL 3388
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC----------------------- 230
G D G C + CT QF C KCIP WKCD DC
Sbjct: 3389 GAD-GKTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPSDCPEFKCRPGQFQCS 3447
Query: 231 ----------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 3448 TGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-- 3505
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D DE C Q QCA++K+CIP W+CD + DC VD +DE +
Sbjct: 3506 ---DGDDEKDCPEVTCAPNQFQCAVNKRCIPRVWVCDRDNDC-----VDASDEP----DN 3553
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC + DE
Sbjct: 3554 CTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDSSDE 3591
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 103/234 (44%), Gaps = 26/234 (11%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C++ S +C+ DC + DE CT ++ C G CI S +C+ F+DC ED SD
Sbjct: 2651 RCISSSSWCNELDDCGDNSDEIACKKTNCTSEEYRCRDGTCIGNSSRCNQFIDC-EDASD 2709
Query: 237 EPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N I C F V+ C + C +W+CD DC D D + +
Sbjct: 2710 EMNCNITDCSSYFKLGVKGVTFKNCERTSLCYAPSWVCDGSNDCG--DFSDEKNCPGVRK 2767
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C C + CIP +W CD+E DC + DE H C + C
Sbjct: 2768 PKCPVNYFACP-NGHCIPMSWTCDKESDCE-----NGADE------MHCDKFCTSMQFEC 2815
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCENLKCSHKCSPTPRGAMC 400
S+++C++ CDG DC + DEG C +N E+ +C PR +C
Sbjct: 2816 -SNHRCISKHWVCDGSDDCGDKSDEGAICQSNTCSPESFRCPSTHVCIPRRWLC 2868
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 150/360 (41%), Gaps = 63/360 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D +
Sbjct: 3175 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALVVDVQHGFL 3233
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ K GM G NRS +V I WP+ L +DY +YW D+ + ++ +D
Sbjct: 3234 YWTDWGDNSLIGKIGMDGTNRSVIVDSRITWPNGLTLDYVNSRIYWADAREDYIQFANLD 3293
Query: 158 GSHN------------AVLCHPNELRCGSSNQCVALS---------KFCDGKPDCSNGED 196
G++ A+ + L C Q +A+S C+ + +
Sbjct: 3294 GTNRHTVISQDIPHIFALTLFEDYLGC---TQMIAISCKRNLKGKVIVCEXIVNINECFS 3350
Query: 197 EGPFCNAECTPGQFSCGMGKCIPE---SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
P N C C C+ +KC + G+D TC+ C Q C
Sbjct: 3351 LVPVPNHPCKMNNGGCS-NLCLLSPNGGYKCACPTN-FYLGAD-GKTCVSNCTASQFVCK 3407
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ KCIP W CD E DC D +DE D +C GQ QC+ + C ++CD
Sbjct: 3408 -NDKCIPFWWKCDTEDDCG-----DRSDEPSDCPEFKCRPGQFQCS-TGICTNPAFICDG 3460
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DC DN+DE + + +C P++ +C ++N+C+ C+G+ +C +G+DE
Sbjct: 3461 DNDCQ-----DNSDE-----ANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGDDE 3510
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++E A M G R LV NIQWP+ L +DY + LYW D+ L+ + S+R++G+ V
Sbjct: 4087 KIETAAMDGTLRETLVEDNIQWPTGLAVDYYNERLYWADAKLSIICSIRLNGTDPVVAIS 4146
Query: 164 ----LCHP 167
L HP
Sbjct: 4147 NKKGLTHP 4154
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G RS LV +I WP+ + IDY + LYWCD+ + +E + ++ G + V+
Sbjct: 2108 RIERSRLDGSERSILVQTSISWPNGVSIDYEEGKLYWCDARTDKIERIDLETGKNREVVL 2167
Query: 166 HPNEL 170
N +
Sbjct: 2168 SSNNM 2172
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKC 258
C+P QF+C CI + W+CDG DC DGSDE P + I +C + C ++ C
Sbjct: 110 CSPKQFACKDQVTCISKGWRCDGEKDC-PDGSDEAPEICPQSKISKCQPNEHNCLGTEIC 168
Query: 259 IPHNWLCDEEMDCS 272
IP LC+ DCS
Sbjct: 169 IPMGKLCNGHHDCS 182
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 72/166 (43%), Gaps = 11/166 (6%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F CG G CI S CDG C + ++ + C C G C ++ +CI + C+E
Sbjct: 2603 EFECGNGDCINYSMTCDGVPHCKDKADEKLSYCRTRHCRKGFKHC-MNGRCISSSSWCNE 2661
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC DN+DE K C + + +C CI ++ C++ +DC D ++
Sbjct: 2662 LDDCG-----DNSDEIACKKTNCTSEEYRCR-DGTCIGNSSRCNQFIDCEDASDEMNCNI 2715
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF C ++ C A S CDG DC + DE
Sbjct: 2716 TDCSSYFKLGVK--GVTFKNCERTSLCYAPSWVCDGSNDCGDFSDE 2759
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
C PNE C + C+ + K C+G DCS+G DEGPFC
Sbjct: 155 CQPNEHNCLGTEICIPMGKLCNGHHDCSDGSDEGPFC 191
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 430 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 487
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN----AECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C ++C P + +C G CI
Sbjct: 110 CSPKQFACKDQVTCISKGWRCDGEKDCPDGSDEAPEICPQSKISKCQPNEHNCLGTEICI 169
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFN 247
P C+G DC DGSDE C N
Sbjct: 170 PMGKLCNGHHDC-SDGSDEGPFCREYAHN 197
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 21/135 (15%)
Query: 48 FKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN----DLLNSWDLPAPEIFP 103
K+ LN + +AL+F++R Q + + S+ +R IN +L+ L P+
Sbjct: 3126 LKQGLN--NAVALDFDYREQMIYWTDVTTQGSM-IRRMHINGSNVQVLHRTGLSNPDGLA 3182
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
+D + +E + ++G R+ LV ++ P +LV+D LYW D N+
Sbjct: 3183 VDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDVQHGFLYWTDWGDNS 3242
Query: 151 -VESVRVDGSHNAVL 164
+ + +DG++ +V+
Sbjct: 3243 LIGKIGMDGTNRSVI 3257
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 16/83 (19%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T + WP+ L +DY ++ + W D+ + +
Sbjct: 1485 WDSSMP-------RIEAASMSGEGRRTIHKETGSGGWPNGLTVDYLEERILWIDARSDAI 1537
Query: 152 ESVRVDGS-------HNAVLCHP 167
S + DGS N L HP
Sbjct: 1538 YSAKYDGSGLIEVLKGNEYLSHP 1560
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 54/124 (43%), Gaps = 26/124 (20%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQF 210
R+DG LC PN R CDG DC + DE C+ E P +F
Sbjct: 1149 RLDG-----LCIPNRWR-------------CDGDTDCMDTSDE-KNCDGETRPCDPNVKF 1189
Query: 211 SCG-MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDEE 268
C +CI ++W CDG DC ED SDE N C + CA + C+P LCD
Sbjct: 1190 GCKDSARCISKAWVCDGDSDC-EDNSDEENCESLVCKSPSHTCANNTSICLPPEKLCDGN 1248
Query: 269 MDCS 272
DC
Sbjct: 1249 DDCG 1252
>gi|301615896|ref|XP_002937402.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Xenopus (Silurana) tropicalis]
Length = 3233
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 167/375 (44%), Gaps = 78/375 (20%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-------------------- 201
A C P++ C ++ +C++LS CD + DC + DE C
Sbjct: 959 ARTCQPHQYSC-NNGRCISLSWICDQEDDCGDRSDEMASCEFKTCEPDTQFVCGNGRCIS 1017
Query: 202 --------------------NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT- 240
+ CT QF C G+CIP W CDG DC D SDE +
Sbjct: 1018 NKWHCDSDDDCGDGSDESGCSLSCTDKQFRCSSGRCIPAHWVCDGDNDC-GDFSDETHAN 1076
Query: 241 -------CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC- 290
C Q QC CIP WLCD E DC D +DE QC
Sbjct: 1077 CSRTVSPVSGACEAKQFQCHPDGNCIPELWLCDGEKDCE-----DGSDERGCNGTLRQCD 1131
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS- 349
+ C + +CI + W+CD ++DC D++DED+ + + +C P + C +
Sbjct: 1132 AKTKFACKNTGRCISNAWVCDGDIDCE-----DHSDEDYCEGY-----ICGPPKYPCAND 1181
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQN- 407
++ C+ K C+G+ DC +G DEG C ++ N CSH+C P RG +C CP G +
Sbjct: 1182 TSICLQPEKLCNGRRDCPDGSDEGDIC-DECSLNNGGCSHQCIIAPGRGIVCSCPQGMHL 1240
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
NKT C D C C Q C CSC EG+ L DG++C++V+ + A
Sbjct: 1241 GTDNKT-CEQVDYCTKHTKCSQVCEQHKQVVKCSCYEGWVLNTDGETCSSVDTFE---AF 1296
Query: 466 IIFSSTVDIRRIHLN 480
IIFS +IRRI L+
Sbjct: 1297 IIFSIRHEIRRIDLH 1311
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 99/196 (50%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C G+ C + C+ +WLCD E DC DN+DE D C N + C
Sbjct: 67 CDPGEYLCHDNVTCVSQSWLCDGEPDCP-----DNSDESVDTCHEKIVFKCPRNHVACTG 121
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--Q 406
+ C+ SK C+G DC++G DEG C + C+ C +KC+ G C+C G
Sbjct: 122 TKNCIHYSKLCNGVYDCTDGYDEGAHCRELQTTCQKRNCQYKCAIMRNGTECYCRDGYET 181
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
P+ C D DEC GSC QTC NT SY CSC EGY ++ D KSC A N P D P +
Sbjct: 182 GPDGRTCKDIDECAAYGSCSQTCRNTLGSYTCSCIEGYLIQSDNKSCKAKNEPADRPPVL 241
Query: 467 IFSSTVDIRRIHLNGS 482
+ +++ I + +NG
Sbjct: 242 LIANSETIEVLDINGG 257
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 157/369 (42%), Gaps = 58/369 (15%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ N C N C + +C++ + CDG+ DC +G DE C+ C+ QF+C KCI
Sbjct: 2635 AQNKQKCEENYFEC-QNGRCISNAWVCDGQRDCEDGRDE-LHCDTSCSWSQFACSKNKCI 2692
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC + C C G C S C+P +WLCD E DC
Sbjct: 2693 SKQWVCDGEDDCGNGLDESEELCGSVTCAAGFFSCPGSHACVPSHWLCDGERDCPNGSDE 2752
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST D T D + F HQC + CA
Sbjct: 2753 LSTADCAPVTTCDENAFMCNNKVCIPKQFMCDLDDDCGDGSDESLECGYHQCGPEEFSCA 2812
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ + +W CD + DC+ D++DE +K + C+ + C + +CV
Sbjct: 2813 DGRCLLNSHWQCDGDFDCA-----DHSDEAPLNKKCRNTEQSCNSSSFMC-KNGKCVPKG 2866
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
CD + DC +G DE G N CS C P G C C G +N KT C
Sbjct: 2867 ALCDTRDDCGDGSDERGCHVNECLSKRVSGCSQDCQDLPVGYKCKCWPGFRLKNDGKT-C 2925
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTV 472
VD DECL C Q C NT+ +Y C C +GY + P+ C +++ +E ++ +
Sbjct: 2926 VDIDECLSGFPCSQQCINTYGTYKCLCADGYQIHPEYPNGCKSLS---EEDPFLLLADHH 2982
Query: 473 DIRRIHLNG 481
+IR++ +G
Sbjct: 2983 EIRKMSTDG 2991
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 145/332 (43%), Gaps = 54/332 (16%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G R VT N+ WP+ L +D+ ILY
Sbjct: 686 VMDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGSERQIFVTSNMLWPNGLSLDHENSILY 745
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNELR--CGSSNQCVAL--SKFCDG---KPDCSNG- 194
WCD+ + +E + ++G+ V+ EL G S+ +L + + +G + D N
Sbjct: 746 WCDAFYDHIEQIYLNGTLRKVVGSGKELNHPFGLSHHGHSLFWTDYMNGSIFQLDLRNKN 805
Query: 195 -----EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS----------DEPN 239
++ P + + G C + C + G DE N
Sbjct: 806 ITLLRQERPPLFGLQIYDPKKQQGDNACRLNNGGCGTLCLAIPGGRVCGCADNQHLDENN 865
Query: 240 -TCIHQ--------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FH 288
TC+ C + + QC + +CI +W CD E DC +D +DED++ H
Sbjct: 866 STCVFNVEEKLPQLCNSEEFQCK-NYRCIQESWKCDGEDDC-----LDGSDEDFENCLNH 919
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C N Q +C S +CIP WLCD DC + N DE + A C P++ C
Sbjct: 920 SCPNDQFKCR-SNRCIPKRWLCDGANDCGS-----NEDESNETCL---ARTCQPHQYSC- 969
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
++ +C++LS CD + DC + DE C K
Sbjct: 970 NNGRCISLSWICDQEDDCGDRSDEMASCEFKT 1001
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
R +++C+ +K C+ + DC + DE + C +F C G CI +S +C+ +D
Sbjct: 2515 FRLCGNHRCIPNNKVCNDEDDCGDNSDELDCKISTCASTEFRCTDGTCITKSAQCNQIID 2574
Query: 230 CLEDGSDEPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI-- 276
C D SDE N C H G ++C + CI W+CD DC +D++
Sbjct: 2575 C-ADASDEKNCNNTDCTHYYKLGVKTAGFIRCNSTSLCILPEWICDGANDCGDYSDELKC 2633
Query: 277 -VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
N + + + +C NG +CI + W+CD + DC D DE H
Sbjct: 2634 PAQNKQKCEENYFECQNG--------RCISNAWVCDGQRDCE-----DGRDE------LH 2674
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ C S N+C++ CDG+ DC NG DE
Sbjct: 2675 CDTSCSWSQFAC-SKNKCISKQWVCDGEDDCGNGLDE 2710
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 129/312 (41%), Gaps = 45/312 (14%)
Query: 95 DLPAPEIFPLDE---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D PA +++ D ++E+ G +R +V SL I + D ++W D +
Sbjct: 2330 DHPAEKLYYSDGSLGKIERCEYDGSHRHVIVRSGPGTFFSLAI--HNDYIFWSDWVRRAI 2387
Query: 152 -----------ESVRVDGSHN--AVLCHPNELRCGSSNQCVALSKFC--------DGKPD 190
+ +R D H ++ N+ + C ++ C DG+ +
Sbjct: 2388 LRSNKYTGGETKVLRSDIPHQPMGIIAVTNDTNTCKLSPCSYMNGGCHDLCLITPDGRIN 2447
Query: 191 CSNGEDEGPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
CS D + C +F C G+CI CDG V C + ++ + C
Sbjct: 2448 CSCRGDRVLVNDNRCVSKNSSCNMFSEFECANGECIEYHQTCDGIVHCKDRSDEKQSYCE 2507
Query: 243 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
++ C+ G C + +CIP+N +C++E DC DN+DE K C + + +C
Sbjct: 2508 NRSCWRGFRLCG-NHRCIPNNKVCNDEDDCG-----DNSDELDCKISTCASTEFRCT-DG 2560
Query: 302 KCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CI + C++ +DC+ D + + D Y+ +RC S++ C+ C
Sbjct: 2561 TCITKSAQCNQIIDCADASDEKNCNNTDCTHYYKLGVKT--AGFIRCNSTSLCILPEWIC 2618
Query: 361 DGKPDCSNGEDE 372
DG DC + DE
Sbjct: 2619 DGANDCGDYSDE 2630
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 122/314 (38%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L ID+ + LY+ D L +E DGSH V+
Sbjct: 2303 IMRSTLSGQNAQVIVSTDIVTPNGLTIDHPAEKLYYSDGSLGKIERCEYDGSHRHVIVRS 2362
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
N + S + SN G P T +C
Sbjct: 2363 GPGTFFSLAIHNDYIFWSDWVRRAILRSNKYTGGETKVLRSDIPHQPMGIIAVTNDTNTC 2422
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C DG ++C G N C+ + + +CA + +
Sbjct: 2423 KLSPCSYMNGGCHDLCLITPDGRINCSCRGDRVLVNDNRCVSKNSSCNMFSEFECA-NGE 2481
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI ++ CD + C D +DE + + C+ G C + +CIP+N +C++E D
Sbjct: 2482 CIEYHQTCDGIVHCK-----DRSDEKQSYCENRSCWRGFRLCG-NHRCIPNNKVCNDEDD 2535
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2536 CG-----DNSDE-----LDCKISTCASTEFRC-TDGTCITKSAQCNQIIDCADASDE--- 2581
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2582 ----KNCNNTDCTH 2591
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ +A + G R+ LV I WP+ + +DY ++ LYWCD+ + +E + ++ N
Sbjct: 1980 ISRARLDGSERTVLVNTAISWPNGISVDYEENKLYWCDARTDKIERIDLESGRN 2033
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 95 DLPAPEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
D A ++F D ++E+ + G NR+ +V I+ P++L +D +YW D +L+
Sbjct: 369 DATAGKLFFTDYGTVAKVERCDLDGMNRTRIVVSKIEQPTALTLDLVNKFVYWADVYLDY 428
Query: 151 VESVRVDGSHNAVLCHPNEL 170
+E V +G + + E+
Sbjct: 429 IEVVDYEGRNRQSIIQGKEV 448
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSC-GMGKC 217
LC P E C + CV+ S CDG+PDC + DE +C +C G C
Sbjct: 66 LCDPGEYLCHDNVTCVSQSWLCDGEPDCPDNSDESVDTCHEKIVFKCPRNHVACTGTKNC 125
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
I S C+G DC DG DE C Q N Q +CA+ +
Sbjct: 126 IHYSKLCNGVYDC-TDGYDEGAHCRELQTTCQKRNCQYKCAIMR 168
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 200 FCNAE---CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQ 251
F AE C PG++ C C+ +SW CDG DC ++ + +TC + +C V
Sbjct: 59 FAAAEQQLCDPGEYLCHDNVTCVSQSWLCDGEPDCPDNSDESVDTCHEKIVFKCPRNHVA 118
Query: 252 CALSKKCIPHNWLCDEEMDCS 272
C +K CI ++ LC+ DC+
Sbjct: 119 CTGTKNCIHYSKLCNGVYDCT 139
>gi|74197942|dbj|BAE43341.1| unnamed protein product [Mus musculus]
Length = 426
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 154/327 (47%), Gaps = 37/327 (11%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGK 188
PSS V D ++D D N C +L C S+ QCV + CD
Sbjct: 82 PSSWVCDQDKDCSDGADEQQNCP----------GTTCSSQQLTC-SNGQCVPIEYRCDHV 130
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248
DC +G DE C Q +C G C S KCD VDC D SDE N C C
Sbjct: 131 SDCPDGSDERNCYYPTCD--QLTCANGACYNTSQKCDHKVDC-RDSSDEAN-CTTLCSQK 186
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+ QC S +CI ++CD + DC DN+DE + C Q C+ + +CI NW
Sbjct: 187 EFQCG-SGECILRAYVCDHDNDCE-----DNSDEHNCNYDTCGGHQFTCS-NGQCINQNW 239
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD + DC D+ DED + + C+P E C S +C+++ K CDG PDC
Sbjct: 240 VCDGDDDCQ-----DSGDEDGCESNQRHHT-CYPREWACPGSGRCISMDKVCDGVPDCPE 293
Query: 369 GEDE-----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQ-CVDADECL 420
GEDE G +C C L C ++C TP G CFCP G N N ++ C+D D+C
Sbjct: 294 GEDENNATSGRYCGTGL-CSILNCEYQCHQTPYGGECFCPPGHIINSNDSRTCIDFDDCQ 352
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLR 447
I G CDQ C + + C C EGY L
Sbjct: 353 IWGICDQKCESRQGRHQCLCEEGYILE 379
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSGQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCGSGFFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
IP +W+CD++ DCS D DE + C + Q+ C+ + +C+P + CD DC
Sbjct: 81 IPSSWVCDQDKDCS-----DGADEQQNCPGTTCSSQQLTCS-NGQCVPIEYRCDHVSDCP 134
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 -----DGSDERNCYYPTCDQLTC--------ANGACYNTSQKCDHKVDCRDSSDE 176
>gi|194895161|ref|XP_001978195.1| GG17831 [Drosophila erecta]
gi|190649844|gb|EDV47122.1| GG17831 [Drosophila erecta]
Length = 1978
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 165/367 (44%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C G F CG G CI +W
Sbjct: 1119 CHVHQHAC-DNGKCVDSSLVCDGTNDCGDNSDE-MLCEATSRCEQGMFQCGSGSCIAGTW 1176
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C H+ + L +C+ +CD +E++C T
Sbjct: 1177 ECDGRIDC-SDGSDEHDKCAHRTCPPDMHRCLLGQCLDRRLVCDGHNDCGDKSDELNCGT 1235
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D+F +C G+ +C +
Sbjct: 1236 DSSTANISCTEDQFQCTSNLKICLPSAVRCNGTAECPRGEDEADCGDVCSIYEFKCRSGR 1295
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ N ++ + +S ++ C P+ C +CV
Sbjct: 1296 ECIRREFRCDGQKDCGDGSDELSCELEKGNHNQSQIQPWSTSSRACRPHLFDC-QDGECV 1354
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1355 DLSRVCNSFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1414
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT + C C + LR D SC ++ A+++FSS
Sbjct: 1415 KSCLDIDECQEQQPCAQLCENTLGGFQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1470
Query: 471 TVDIRRI 477
++R +
Sbjct: 1471 FNEVRNL 1477
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/346 (29%), Positives = 151/346 (43%), Gaps = 50/346 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPES 221
C+ + +C C+ +K CDG+ DC + DE C P F C G C+
Sbjct: 91 CNAGQFQC-RDGGCILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAE 149
Query: 222 WKCDGFVDCLEDGSDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEE 268
C+G +C G DE N + C + C + CIP +++CD
Sbjct: 150 LMCNGIDNC-PGGEDELNCPVRPGFRFGDTAHRMRNCSKYEFMCEQDRTCIPIDFMCDGR 208
Query: 269 MDCS--TDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
DC+ +D++ + + H C NG+ L +K +W+CD DD D
Sbjct: 209 ADCADKSDEVAGCKQAEATCSAEGHLCDNGR---CLRRK----HWVCD-----GVDDCGD 256
Query: 324 NTDEDWDKYFSHNAVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
+DE + LC P + C + C+ LS+ CDG DCS+G DE C++K
Sbjct: 257 GSDERGCQN------LCKPEKGKFLCRNQETCLTLSEVCDGHSDCSDGSDETELCHSKPG 310
Query: 382 CENLKC--SHKCSPTPR-GAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLS 435
C+ C KC P GA C CP G K + C D DEC D C Q C NT
Sbjct: 311 CDGKNCVLGSKCHMMPTGGAECICPRGFRLAKFEDKCEDIDECKEQDDLCSQGCENTSGG 370
Query: 436 YVCSCTEGYTLRPDGKSCTA-VNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C GY D ++C A V+ ++ +++++ + I +HL+
Sbjct: 371 YRCVCDAGYLPDKDNRTCRAVVHGSIEQQPLLLYTTQMTIMGMHLH 416
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 82/182 (45%), Gaps = 28/182 (15%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-------TCIHQCFNGQVQCALSKKCIPH 261
+F C G+C+ + +C+G DC+ D SDE N C Q C ++C+
Sbjct: 1033 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMNCDEEHRRKPKVMCSPSQFACHSGEQCVDK 1091
Query: 262 NWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1092 ERRCDNRKDCH-----DHSDEQHCEMFDKTKKCHVHQHACD-NGKCVDSSLVCDGTNDCG 1145
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DN+DE C +CGS + C+A + CDG+ DCS+G DE C
Sbjct: 1146 -----DNSDE----MLCEATSRCEQGMFQCGSGS-CIAGTWECDGRIDCSDGSDEHDKCA 1195
Query: 378 NK 379
++
Sbjct: 1196 HR 1197
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 543 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 602
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 603 MLKHPYGL 610
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCG 213
D +H C E C C+ + CDG+ DC++ DE C A C+ C
Sbjct: 177 DTAHRMRNCSKYEFMCEQDRTCIPIDFMCDGRADCADKSDEVAGCKQAEATCSAEGHLCD 236
Query: 214 MGKCIPES-WKCDGFVDCLEDGSDEPNTCIHQCF--NGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ W CDG DC DGSDE C + C G+ C + C+ + +CD D
Sbjct: 237 NGRCLRRKHWVCDGVDDC-GDGSDE-RGCQNLCKPEKGKFLCRNQETCLTLSEVCDGHSD 294
Query: 271 CSTDDIVDNTDE 282
CS D +DE
Sbjct: 295 CS-----DGSDE 301
>gi|74136369|ref|NP_001028079.1| very low-density lipoprotein receptor precursor [Macaca mulatta]
gi|40231967|gb|AAR83314.1| very low density lipoprotein receptor [Macaca mulatta]
Length = 873
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 166/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ C + S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRINEISCAAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGVHEFQCSTSS-CIPISWVCDDDADCS-----DQFDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 158/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ CA S +CIP +W CD E DC +
Sbjct: 85 VPNRWKCDGDPDC-EDGSDESPEQCHMRTCRINEISCAAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPSEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGVHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQFDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 RDPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|619647|gb|AAA59384.1| very low density lipoprotein receptor [Mus musculus]
Length = 873
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 120/362 (33%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------- 316
++ +C ++QC S +CI W CD + DC
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFE 284
Query: 317 --------------STDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCD 361
D VD +DE N C P + +C S +C+ +SK CD
Sbjct: 285 CEDGSCIHGSRQSNGIRDCVDGSDE----VNCKNVNQCLGPGKFKC-RSGECIDMSKVCD 339
Query: 362 GKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ DC + DE P N+ N CSH C G C C AG + ++ C D D
Sbjct: 340 QEQDCRDWSDE-PLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 155/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSHKCSPT---------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQSNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|27806193|ref|NP_776914.1| very low-density lipoprotein receptor precursor [Bos taurus]
gi|4128201|gb|AAD03484.1| very low density lipoprotein receptor VLDL-R2 [Bos taurus]
gi|296484785|tpg|DAA26900.1| TPA: very low-density lipoprotein receptor precursor [Bos taurus]
Length = 845
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 164/367 (44%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCYSGEDEENCGNVTCSSDEFTCSSGRCISRNFM 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C A CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELD-CAPPTVGPTSSSAAPPPCIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTRCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN K DC N CSH C G C+C AG + ++
Sbjct: 334 ISKVCNQKQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECYCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/382 (28%), Positives = 160/382 (41%), Gaps = 91/382 (23%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C N+ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 GAGRKAKCEANQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 274
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCYSG 143
Query: 275 DIVDN-------TDEDWDKFHQCF------NGQVQC--------------------ALSK 301
+ +N +DE +C NGQ C A
Sbjct: 144 EDEENCGNVTCSSDEFTCSSGRCISRNFMCNGQDDCSDGSDELDCAPPTVGPTSSSAAPP 203
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKF 359
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 PCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTRCPASEIQCGSG-ECIHKKWR 257
Query: 360 CDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAM 399
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 258 CDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQ 317
Query: 400 CFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLS 435
C P +C+D +ECL+ +G C C + +
Sbjct: 318 CLGPGKFKCRSGECIDISKVCNQKQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIG 377
Query: 436 YVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 378 YECYCAAGFEL-IDRKTCGDID 398
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++ + +S L + L NS DL P +D
Sbjct: 517 AIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DLREPASIAVDPLSGFVYWSDW 575
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R LVT +IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 576 GEPAKIEKAGMNGFDRRALVTADIQWPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRR 635
Query: 163 VLCHPNEL 170
++ E
Sbjct: 636 IVLKSLEF 643
>gi|312372200|gb|EFR20215.1| hypothetical protein AND_20492 [Anopheles darlingi]
Length = 4749
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/340 (33%), Positives = 165/340 (48%), Gaps = 34/340 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCG-MGKCIPESW 222
C N+ +C ++++C++ S CDG PDC +G DEG C+ C +F C +CIP W
Sbjct: 2784 CKTNQFKCTNTSECISNSWQCDGTPDCGDGSDEGEHCSRLHCLENEFQCSPTNRCIPHQW 2843
Query: 223 KCDGFVDCL-----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD 275
CDG VDC E G D+ T + C + +C + +CI CD E+DC +D+
Sbjct: 2844 VCDGEVDCKGSEDDEKGCDQRATMLPVCDKTEFRCE-NGECISALHFCDTEVDCVDGSDE 2902
Query: 276 IVD-NTDEDWDKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D DED + +G Q +CA + +CI N C+ DC D +DED
Sbjct: 2903 PADCVYDEDEESTGGAAHGSCNDPDQFRCA-NGRCIERNLTCNVNDDCG-----DGSDED 2956
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ + P+ RC S C+ S CDG DC + +DE N+ + C
Sbjct: 2957 VPLCRNTTFICAGPDLFRC-ESGACIPSSMLCDGANDCGDWKDEKLCEVNECEVLPNLCD 3015
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT---QCVDADECLIDGS---CDQTCTNTHLSYVCSCTE 442
H C P G C C G +K +CVD DEC + C QTC NTH SY C+C E
Sbjct: 3016 HHCQDRPVGYECSCRPGYVVDKNDHHRCVDLDECNDQHNPRPCSQTCINTHGSYHCACLE 3075
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
G+ LR +G +C A + + +IFS+ +R + LNG+
Sbjct: 3076 GFELRSNG-TCRANSFDR---TKLIFSNRYYLREVDLNGT 3111
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 150/360 (41%), Gaps = 63/360 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN--AECTPGQFSCGMGKCI 218
+ C PNE RC S +C+ S CD +PDC+NGEDE P CN C P F C KCI
Sbjct: 3566 SATCPPNEFRC-SEGRCIPQSWRCDNEPDCANGEDELPEHCNKTTTCEPTHFRCNNSKCI 3624
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------- 271
P W+CD DC D SDE N + C + +C CI CD E++C
Sbjct: 3625 PGRWRCDFENDC-GDNSDELNCELRNCSESEFRCR-DGHCIRGILRCDGEVNCPDHSDEE 3682
Query: 272 ---------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
+D +D +DE K C G+ +C + KCI
Sbjct: 3683 NCNVTCSANQFRCHTNPACISNKFKCDGDNDCIDESDE---KDCACAEGEYRCK-NGKCI 3738
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
+W+CD DD +DN+DE + H C+ RC + N C+ S CD K
Sbjct: 3739 LGSWVCD-----GIDDCLDNSDEMGEYCKKHG---CNKRAFRCANRN-CIRKSLLCDNKD 3789
Query: 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG- 423
DC + DE K + +C+ C Q P+ D C+ G
Sbjct: 3790 DCGDSSDEKSGLCQKCPPNSFRCASDSKCIDAALRC----DQTPHCLDESDEIGCIKTGC 3845
Query: 424 ---SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+C Q C + C C EGY G++ + V + +EP ++ +S D R ++++
Sbjct: 3846 GFGACSQICVEKKGHFTCRCAEGYAKNGTGRNASCVAI--EEPGILLLASESDFRSLYID 3903
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 117/251 (46%), Gaps = 27/251 (10%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSC 212
+ DG C +C S+ +C+ CD + DC +G DE C EC GQF C
Sbjct: 3391 LAADGKSCKANCSAAHFQCRSTLKCIPFYWRCDRQDDCGDGSDEPASCPPFECEAGQFQC 3450
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK------CIPHNWLCD 266
+CI S CDG C D SDE + ++CF +C+ S + CI CD
Sbjct: 3451 DSKQCINPSQICDGMDQC-GDRSDERDCDAYECFASHFRCSASAERNTSAFCIEGARRCD 3509
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
E +DC + DE + C Q +CA KCI W+CD DC D++D
Sbjct: 3510 EHVDCPNGE-----DEQDCERKNCTYTQFRCASGGKCIDRTWVCDNVPDCH-----DHSD 3559
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCE-- 383
E + C PNE RC S +C+ S CD +PDC+NGEDE P CN CE
Sbjct: 3560 E----LVCGPSATCPPNEFRC-SEGRCIPQSWRCDNEPDCANGEDELPEHCNKTTTCEPT 3614
Query: 384 NLKCSH-KCSP 393
+ +C++ KC P
Sbjct: 3615 HFRCNNSKCIP 3625
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 237 EPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFN 292
+P C+ C Q C + KCIP W CD DCS D +DE DK H C
Sbjct: 82 DPEQCLKWTLTCPQSQFTCVVDGKCIPIMWRCDTFADCS-----DGSDEVGCDKAHSCKE 136
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCST---DDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
GQ C +S +CIP W CD ++DC +VD++DED H C P + C S
Sbjct: 137 GQFHCKVSNRCIPAEWACDGDIDCGVVFKYHMVDDSDEDPGLCRIHKK--CLPTQAVC-S 193
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPF--CNNKADCENLKCSHKCSPTPRGAMCFCP 403
+C+ + +FCDG DCSN E ++A C+ LKCS+ C TP G CF P
Sbjct: 194 DGRCLEIDRFCDGTWDCSNDELHCSINETASRAACDALKCSYDCRITPEGPRCFLP 249
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 146/347 (42%), Gaps = 50/347 (14%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCS--NGEDEGPFCNAECTPGQFSCGMGKCIP 219
++ C N +C S +C+ + CD DC + DE CN +C +F C C+P
Sbjct: 1001 SLTCKENFFQCNISRRCIPNAWVCDRHLDCGPNDRSDEPEHCN-QCP--EFECKNNVCVP 1057
Query: 220 ESWKCDGFVDC--LED--------GSDE----PNTCIHQ--------CFNGQVQCALSKK 257
+ CDG +C L D G DE P+ CI + C N +C K
Sbjct: 1058 YEFLCDGVNNCGDLSDEQQCDVQCGPDEFFCSPHGCIDKSLCNPSLNCLNAFNECEKLMK 1117
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDC 316
P N + + D + + C + ++ C ++CI + C
Sbjct: 1118 --PTNSGDGHSANGTQDRPTSALPSESELKEACRVDLRIICGSDQRCIQ-----NYNRVC 1170
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
S D T+E V+C + C +NQC+ +++ C+G+ DC +G DEG C
Sbjct: 1171 SRMDFAPTTNE---------TVICQHPDRVCRVTNQCITVAQLCNGRTDCPDGTDEGFRC 1221
Query: 377 NNKA-DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTH 433
K D + +CSH C P G +C CP PN C A C G+C Q C
Sbjct: 1222 LEKLCDSRDHECSHTCHNAPEGVVCSCPPHLFLQPNGRDCSHAHACEAWGTCSQNCLVKA 1281
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C EGY+L D SC + +D P +IFS+ +I + LN
Sbjct: 1282 RHYRCDCVEGYSLMYDKFSCRS--NARDSPY-VIFSNRQEILGVDLN 1325
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/241 (34%), Positives = 117/241 (48%), Gaps = 28/241 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESW 222
C RC ++ +C+A S C+G DC +G DE P NA QF+C G+CI ++
Sbjct: 2616 CPAGFFRCNNA-RCIAQSARCNGVQDCGDGSDELICPCNNAT----QFTCTNGQCIAKAL 2670
Query: 223 KCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CD DC D SDE T + C G V+C + C W CD E DC DN D
Sbjct: 2671 RCDIEPDC-RDASDEIGCTVMRNCGAGFVKCPNTTACYLPKWRCDGENDC-----WDNAD 2724
Query: 282 ED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
E C + CA + +CIP W CD E DC+ D D ++ S + +
Sbjct: 2725 ELDCPTAIPTCPEDKFLCA-NGRCIPQTWRCDGEDDCN-DAGHGGADH---RHISSDEIA 2779
Query: 340 ----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C N+ +C ++++C++ S CDG PDC +G DEG C+ EN +CSPT
Sbjct: 2780 CVQHCKTNQFKCTNTSECISNSWQCDGTPDCGDGSDEGEHCSRLHCLEN---EFQCSPTN 2836
Query: 396 R 396
R
Sbjct: 2837 R 2837
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 101/223 (45%), Gaps = 30/223 (13%)
Query: 161 NAVLCHPNELRCGSSNQ------CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
+A C + RC +S + C+ ++ CD DC NGEDE CT QF C
Sbjct: 3478 DAYECFASHFRCSASAERNTSAFCIEGARRCDEHVDCPNGEDEQDCERKNCTYTQFRCAS 3537
Query: 215 -GKCIPESWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
GKCI +W CD DC D SDE P+ C + +C+ +CIP +W CD E
Sbjct: 3538 GGKCIDRTWVCDNVPDC-HDHSDELVCGPSA---TCPPNEFRCS-EGRCIPQSWRCDNEP 3592
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC+ + D E +K C +C S KCIP W CD E DC DN+DE
Sbjct: 3593 DCANGE--DELPEHCNKTTTCEPTHFRCNNS-KCIPGRWRCDFENDCG-----DNSDE-- 3642
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC C+ CDG+ +C + DE
Sbjct: 3643 ---LNCELRNCSESEFRC-RDGHCIRGILRCDGEVNCPDHSDE 3681
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 99/220 (45%), Gaps = 27/220 (12%)
Query: 160 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCG 213
H A C+ C + C+ L CDG DC +G DE N C P F C
Sbjct: 912 HTAATCNNATHFLCRNKFDCIDLKYTCDGDTDCEDGSDEEGGENGPCDPNCDLEHNFQCD 971
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
+CI CDG VDC+++ ++ C C QC +S++CIP+ W+CD +DC
Sbjct: 972 EQRCISRKQVCDGSVDCIDESDEDYANCPSLTCKENFFQCNISRRCIPNAWVCDRHLDCG 1031
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+D D + +QC + +C + C+P+ +LCD +C D+ D D
Sbjct: 1032 PNDRSDEPEH----CNQC--PEFECK-NNVCVPYEFLCDGVNNCG--DLSDEQQCD---- 1078
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C P+E C S + C+ S C+ +C N +E
Sbjct: 1079 -----VQCGPDEFFC-SPHGCIDKS-LCNPSLNCLNAFNE 1111
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 145/344 (42%), Gaps = 69/344 (20%)
Query: 92 NSWDLPAPEIFPLDERLEKAGMHGENRSPLVT---KNIQWPSSLVIDYNQDILYWCDSHL 148
+SW +P+ R+++A M+G PLV + I+WP+ L +D ++ LYWCD+ L
Sbjct: 733 SSWSVPSG-------RIDRAWMNGTGMEPLVISKERPIEWPTGLSLDASEGRLYWCDARL 785
Query: 149 NTVESVRVDGSHNAVLC--HPNE---LRCGSSNQCVALSKFCDGKPDCSNGED------- 196
T+ESV +DGS+ +L P + + Q + + G + N D
Sbjct: 786 GTIESVNLDGSNRVLLYDGRPEKQFPISLAVHRQLLYFADNVKGHIEKLNLSDPHSLETI 845
Query: 197 --EGP-------FCN-----AECTPGQFSC-GMGKCIPESWKC---DGFVDCLEDGSDE- 237
E P F N + TP + +C G+ P C +GF ++GS
Sbjct: 846 AIEKPQVFGLKIFDNLTQYGGDRTPCEATCPGLCLNTPVGLSCKCANGFTLSTQEGSSTC 905
Query: 238 -PNTCIH---QCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-- 290
P + H C N C CI + CD + DC D +DE+ + C
Sbjct: 906 VPYSVQHTAATCNNATHFLCRNKFDCIDLKYTCDGDTDCE-----DGSDEEGGENGPCDP 960
Query: 291 ---FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
QC ++CI +CD +DC +D +DED Y + ++ C N +C
Sbjct: 961 NCDLEHNFQCD-EQRCISRKQVCDGSVDC-----IDESDED---YANCPSLTCKENFFQC 1011
Query: 348 GSSNQCVALSKFCDGKPDCS--NGEDEGPFCNN--KADCENLKC 387
S +C+ + CD DC + DE CN + +C+N C
Sbjct: 1012 NISRRCIPNAWVCDRHLDCGPNDRSDEPEHCNQCPEFECKNNVC 1055
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 131/336 (38%), Gaps = 66/336 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +AGM G N++ L+ + + WP++L I + + L+W D+ + + +DG + +L
Sbjct: 3231 IGRAGMDGSNQTILIKEQLGWPNALTISFETNQLFWGDAREDYIGVSDLDGRNVRILLSK 3290
Query: 168 NELRCGSSNQCVALSKF--------CDGKP----DCSNGEDEGPFCNA------------ 203
+ + + A++ + D K G+ G N
Sbjct: 3291 SAQPTLNLHHVFAIAVWEDRIYWSDLDSKSIEYCHKYRGDQCGTLINTIHRPMDIRIYHP 3350
Query: 204 ------ECTPGQFSCG-MGKCIPESWKCDGFVDCLEDG---SDEPNTCIHQCFNGQVQCA 253
+ P + G G CI DG+ D + + +C C QC
Sbjct: 3351 LRQVQPKVNPCRNGAGCQGLCILSPSHPDGYRCLCPDNYLLAADGKSCKANCSAAHFQCR 3410
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ KCIP W CD + DC D +DE +C GQ QC SK+CI + +CD
Sbjct: 3411 STLKCIPFYWRCDRQDDCG-----DGSDEPASCPPFECEAGQFQCD-SKQCINPSQICDG 3464
Query: 313 EMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQ------CVALSKFCDGKPD 365
C D +DE D D Y C + RC +S + C+ ++ CD D
Sbjct: 3465 MDQCG-----DRSDERDCDAY------ECFASHFRCSASAERNTSAFCIEGARRCDEHVD 3513
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
C NGEDE DCE C++ G C
Sbjct: 3514 CPNGEDE-------QDCERKNCTYTQFRCASGGKCI 3542
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMG-KCIP 219
+ C ++ C +C+ + CD DCS+G DE A C GQF C + +CIP
Sbjct: 90 TLTCPQSQFTCVVDGKCIPIMWRCDTFADCSDGSDEVGCDKAHSCKEGQFHCKVSNRCIP 149
Query: 220 ESWKCDGFVDC--------LEDGSDEPNTC-IH-QCFNGQVQCALSKKCIPHNWLCDEEM 269
W CDG +DC ++D ++P C IH +C Q C+ +C+ + CD
Sbjct: 150 AEWACDGDIDCGVVFKYHMVDDSDEDPGLCRIHKKCLPTQAVCS-DGRCLEIDRFCDGTW 208
Query: 270 DCSTDDI 276
DCS D++
Sbjct: 209 DCSNDEL 215
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W+ AP I ++A G ++T +IQ P++L +DY LYW D+ L+ +E
Sbjct: 2401 WNQQAPSI-------QRAYPSGYGLESIITSDIQMPNALTLDYAARKLYWADAILDKIER 2453
Query: 154 VRVDGSHNAVLCH 166
DG H VL H
Sbjct: 2454 TDYDGRHRVVLAH 2466
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 45/111 (40%), Gaps = 9/111 (8%)
Query: 43 DWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIF 102
DW ++N + ++ L + + L +N LL I+
Sbjct: 4003 DWLTERLYVINKKRSNIFVMSYNGTELTTLTATGKHPIDLVVDPVNRLL---------IW 4053
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
+ E + +GM G + LV NI+W S L ID LYW D +T+E+
Sbjct: 4054 SIMETIISSGMDGLGKRKLVHTNIEWASGLAIDTTTKRLYWADYRKSTIET 4104
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 9/70 (12%)
Query: 107 RLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN--- 161
RLE+ M GENR+ + V + WP+ + +DY + +YW D+ +++ ++ DGS +
Sbjct: 1453 RLERCTMAGENRTVIMYVGSDGGWPNGIALDYVLNRVYWIDARSDSIHTIMYDGSDHHLV 1512
Query: 162 ----AVLCHP 167
+VL HP
Sbjct: 1513 IKDQSVLAHP 1522
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
L+ +E++ + G NR+ +V I P + +D +YW D+HL+TV+ V DG+
Sbjct: 418 LEASIERSLLDGSNRTSIVLHKIINPLDVALDLVLQHVYWVDTHLDTVQRVNYDGT 473
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 17/96 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMH 114
T ALE HRN++ C ++ N L C +++ +SW +P P++FP
Sbjct: 302 TRVRALEMVHRNRTFCLVRISN--ETHLECYSVDNTSHSWTMPRPDLFP----------- 348
Query: 115 GENRSPLVTKNIQWPSS--LVIDYNQDILYWCDSHL 148
N +V + W S +D +++++ C L
Sbjct: 349 --NLENVVDIRLDWVSGNWYFLDEEREVIFVCSPQL 382
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 101/260 (38%), Gaps = 38/260 (14%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
+ C Q +C + +CI ++W CD DC D +DE ++ R+ H L E
Sbjct: 2781 VQHCKTNQFKCTNTSECISNSWQCDGTPDCG-----DGSDE--GEHCSRL----HCLENE 2829
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
F + C I Q V + C D D A + P+ ++ E +GE S L
Sbjct: 2830 FQCSPTNRC-IPHQWVCDGEVDCKGSEDDEKGCDQRA-TMLPVCDKTEFRCENGECISAL 2887
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVAL 181
+ + D D +Y D G+ + P++ RC ++ +C+
Sbjct: 2888 HFCDTEVDCVDGSDEPADCVYDEDEE-------STGGAAHGSCNDPDQFRC-ANGRCIER 2939
Query: 182 SKFCDGKPDCSNGEDEG-PFCNAE----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+ C+ DC +G DE P C P F C G CIP S CDG DC D D
Sbjct: 2940 NLTCNVNDDCGDGSDEDVPLCRNTTFICAGPDLFRCESGACIPSSMLCDGANDC-GDWKD 2998
Query: 237 E-----------PNTCIHQC 245
E PN C H C
Sbjct: 2999 EKLCEVNECEVLPNLCDHHC 3018
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCST---DDIVDNTDED 43
H C GQ C +S +CIP W CD ++DC +VD++DED
Sbjct: 132 HSCKEGQFHCKVSNRCIPAEWACDGDIDCGVVFKYHMVDDSDED 175
>gi|348585761|ref|XP_003478639.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1B-like [Cavia porcellus]
Length = 4559
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 127/403 (31%), Positives = 174/403 (43%), Gaps = 99/403 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C+A C QF+CG G+CIP +W
Sbjct: 881 CPDDQFKC-QNNRCIPKKWLCDGANDCGSNEDESNETCSARTCQSDQFACGNGRCIPRAW 939
Query: 223 KCDGFVDCLEDGSDEPNTC----------------------------------------I 242
CD DC D +DE TC +
Sbjct: 940 LCDREDDC-GDQTDEMATCEFPTCEPLTQFICKNGRCISSKWHCDADDDCGDGSDELGCV 998
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCAL 299
H CF+ Q +C+ S +CIP +W CD + DC +D+ N T E+ C + QC
Sbjct: 999 HACFDNQFRCS-SGRCIPGHWTCDGDNDCGDFSDETQANCTKEEIQSPAGCNGNEFQCYP 1057
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDE----------DWDKYFSH-------------- 335
CIP W CD E DC D +DE D+ FS
Sbjct: 1058 DGNCIPDLWHCDGEKDCE-----DGSDEKGCNGTIRLCDYKTKFSCRSTGRCINKAWVCD 1112
Query: 336 --------------NAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1113 GDIDCEDQSDEEDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCD-EC 1171
Query: 381 DCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYV 437
N CS++CS P RG +C CP G NK C D C C Q C +
Sbjct: 1172 SLNNGGCSNQCSVVPGRGIVCSCPKGLQLNKDNKTCEIVDYCSSHLKCSQVCEQHKHTVK 1231
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1232 CSCYEGWKLDADGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1271
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 153/369 (41%), Gaps = 58/369 (15%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2638 QNKHKCEENYFGC-PSGRCILNTWICDGQKDCEDGLDE-LHCDSSCSWSQFACSAQKCIS 2695
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S C+P +WLCD E DC
Sbjct: 2696 KHWVCDGEDDC-GDGLDESDSICGDITCAADMFSCQGSHACVPRHWLCDGERDCPDGSDE 2754
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F QC + +CA
Sbjct: 2755 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDELLKCGYRQCSAEEFRCA 2814
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ + W CD + DC D++DE + H C+ + C + +C+
Sbjct: 2815 DGRCLLNTQWQCDGDFDCP-----DHSDEAPLNPKCKHAEQSCNSSFFMC-KNGRCIPSG 2868
Query: 358 KFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCV 414
CD K DC +G DE N + CS C P C C G + CV
Sbjct: 2869 NLCDSKDDCGDGSDERNCHINECLSKKTSGCSQDCQDLPVSYKCKCWPGFQMKDDGKTCV 2928
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTVD 473
D DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I + +
Sbjct: 2929 DIDECSSGFPCSQHCINTYGTYKCLCTDGYKIQPDNPNGCKSLS---DEEPFLILADHHE 2985
Query: 474 IRRIHLNGS 482
IR+I +GS
Sbjct: 2986 IRKISTDGS 2994
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C +++CV LS+ C+G DCS+G DEG C +C+ + C +KC+
Sbjct: 70 IKCSLNHIACLGTSKCVHLSQLCNGVFDCSDGYDEGAHCRELIPNCQQMNCQYKCAIVRN 129
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SYVC C EGY ++P+ ++C
Sbjct: 130 STRCYCEDGFEVKEDGRGCKDQDECAVYGTCSQTCVNTHGSYVCGCVEGYVMQPNNRTCK 189
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ +++ I +LNGS
Sbjct: 190 AKIEPTDSPPMLLTANSETIEIFYLNGS 217
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 148/365 (40%), Gaps = 80/365 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D H V C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3493 FWCDGDFDCADGS--DERHCEVSCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKNCE 3549
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE C+ +C Q +C CI
Sbjct: 3550 PASPSCSSSEYICTSGGCISASLKCNGEYDC-ADGSDEMG-CVTECKENQFRCKNKAHCI 3607
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
P WLCD DC +D +DE+ + C + C S C + W+CD + DC
Sbjct: 3608 PVRWLCDGIHDC-----MDGSDEEICDRGGNICRADEFLCNNSL-CKLYFWVCDGQDDCG 3661
Query: 318 --------------------------------------TDDIVDNTDEDWDKYFSHNAVL 339
DD DN+DE+ ++ A
Sbjct: 3662 DNSDEAPDMCVKFLCPPTRPHRCRNNRICLQSEKTCNGVDDCGDNSDEEHCGKVTYKAKP 3721
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------FCNNKADCEN 384
C +E C S+ +C+ + CD DC +G DE C + A C
Sbjct: 3722 CKKDEFTC-SNKKCIPMDLQCDRLDDCGDGSDEQSCRTTPTEYTCEDNVNPCGDDAYCNQ 3780
Query: 385 LKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
+K S C C G +N QC D +ECL+ G C Q C N SY C C +
Sbjct: 3781 IKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGMCSQQCINIEGSYKCVCDQ 3831
Query: 443 GYTLR 447
+ ++
Sbjct: 3832 NFQVQ 3836
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3278 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3336
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3337 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3390
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3391 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3440
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +SN C+ CD + DCS+ DE
Sbjct: 3441 EFQCKNSN-CIPDHWRCDSQNDCSDNSDE 3468
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3356 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3415
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC S CIP +W CD + DCS DN+DE
Sbjct: 3416 VCDEDPDC-ADASDEANCDKKTCGPHEFQCKNS-NCIPDHWRCDSQNDCS-----DNSDE 3468
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA S C+ + CD + DC+ D +DE H V C
Sbjct: 3469 ENCKPQTCTLKDFLCA-SGDCVSSRFWCDGDFDCA-----DGSDE------RHCEVSCSK 3516
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3517 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 3545
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3318 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3376
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3377 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3430
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC S CIP +W CD + DCS DN+DE+ + C
Sbjct: 3431 NCDKKTCGPHEFQCKNS-NCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S + CV+ +CDG DC++G DE
Sbjct: 3480 DFLCASGD-CVSSRFWCDGDFDCADGSDE 3507
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC C + Q C + +CIP
Sbjct: 878 NHSCPDDQFKCQNNRCIPKKWLCDGANDCGSNEDESNETCSARTCQSDQFACG-NGRCIP 936
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 937 RAWLCDREDDCGDQTDEMATCEFPTCEPLTQFICKNGRCISSKWHCDADDDCGDGSDELG 996
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D T + K + C+ NE
Sbjct: 997 CVHACFDNQFRCS-SGRCIPGHWTCDGDNDCG--DFSDETQANCTKEEIQSPAGCNGNEF 1053
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 1054 QCYPDGNCIPDLWHCDGEKDCEDGSDEKGCNGTIRLCDYKTKFSCRSTGRCINKAWVCDG 1113
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1114 DIDCEDQSDEEDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCDECSL 1173
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC +G L D K+C V+
Sbjct: 1174 NNGGCSNQCSVVPGRGIVCSCPKGLQLNKDNKTCEIVD 1211
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 110/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ +K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2524 RCIPHAKLCDGENDCGDNSDELDCKVSTCATVEFHCADGTCIPRSARCNQNIDC-ADASD 2582
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2583 EKNCNNTDCTHFYKLGVKTEGFIKCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2640
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C ++ C
Sbjct: 2641 HKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------LHCDSSCSWSQFAC 2688
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C + AD + + SH C P
Sbjct: 2689 -SAQKCISKHWVCDGEDDCGDGLDESDSICGDITCAADMFSCQGSHACVPRHWLCDGERD 2747
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2748 CPDGSDELSTAGCAPNNT 2765
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ LY
Sbjct: 646 VVDPVNGWMYWTDWEEDEIDASVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHASTLY 705
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H V+ EL
Sbjct: 706 WCDAYYDHIEKVFLNGTHRKVVYSGKEL 733
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 31/235 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2476 EFECGNGECIDYQLTCDGTPHCKDKSDEKLLYCENRSCRRGFKPCHNRRCIPHAKLCDGE 2535
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + CA CIP + C++ +DC+ N +
Sbjct: 2536 NDCG-----DNSDELDCKVSTCATVEFHCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2589
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
+F V ++C S++ CV + CDG DC + DE LKC
Sbjct: 2590 DCTHFYKLGVKTE-GFIKCNSTSLCVLPTWICDGSNDCGDYSDE------------LKCP 2636
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCTNTHLS 435
HKC G CP+G+ T D + DG CD +C+ + +
Sbjct: 2637 VQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDELHCDSSCSWSQFA 2687
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNW 263
C G+F C CI WKCDG DCL+ ++P C H C + Q +C + +CIP W
Sbjct: 840 CKAGEFRCKNRHCIQARWKCDGDDDCLDGSDEDPINCFNHSCPDDQFKCQ-NNRCIPKKW 898
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI 321
LCD DC +++ D ++E C + Q C + +CIP WLCD E DC TD++
Sbjct: 899 LCDGANDCGSNE--DESNETCSA-RTCQSDQFACG-NGRCIPRAWLCDREDDCGDQTDEM 954
Query: 322 VD---NTDEDWDKYFSHNAV-------------------------LCHPNELRCGSSNQC 353
T E ++ N C N+ RC SS +C
Sbjct: 955 ATCEFPTCEPLTQFICKNGRCISSKWHCDADDDCGDGSDELGCVHACFDNQFRC-SSGRC 1013
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQC 413
+ CDG DC + DE +A+C + PAG N N+ QC
Sbjct: 1014 IPGHWTCDGDNDCGDFSDE-----TQANCTKEEIQS-------------PAGCNGNEFQC 1055
Query: 414 VDADECLID 422
C+ D
Sbjct: 1056 YPDGNCIPD 1064
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS++ V
Sbjct: 4012 IEEAAMDGTLRRILVQKNLQRPTGLAVDHLTERIYWADVELSIIGSVLYDGSNSIVSVSS 4071
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4072 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4106
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 109/307 (35%), Gaps = 65/307 (21%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3084 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3143
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3144 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3195
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
N A T G + SW V +P+ H C
Sbjct: 3196 KSLN--------RAHKTSGADRLSL----VSSWHVITDVQVYH-SYRQPDVPKHLCMINN 3242
Query: 250 VQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
C+ L H C + D+ C Q +C + KCIP
Sbjct: 3243 GGCSHLCLLAPGKTHTCACPTNFYLAADNRT--------CLSNCTASQFRCK-TDKCIPF 3293
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWD-KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD + DD D +DE D F C P +CG+ C + CDG+ D
Sbjct: 3294 WWKCD-----TVDDCGDGSDEPDDCPEFK-----CQPGRFQCGTG-LCALPAFICDGEND 3342
Query: 366 CSNGEDE 372
C + DE
Sbjct: 3343 CGDNSDE 3349
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+ K+ + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ N
Sbjct: 1981 RIGKSRLDGSEKLVLVSTGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGSN 2035
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ +V + PS+L +D ++YW D +L+ V V G H +
Sbjct: 345 KVERCDMDGTNRTRIVDSKAEQPSALAVDLINKLVYWVDLYLDYVGVVDYQGRHRHTVIQ 404
Query: 167 PNELR 171
++R
Sbjct: 405 GRQIR 409
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C +++CV LS+ C+G DCS+G DEG C E P Q+ C + +
Sbjct: 70 IKCSLNHIACLGTSKCVHLSQLCNGVFDCSDGYDEGAHCR-ELIPNCQQMNCQYKCAIVR 128
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 129 NSTRCYCEDGF-EVKEDG 145
>gi|395844992|ref|XP_003795229.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Otolemur garnettii]
Length = 4603
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 116/362 (32%), Positives = 162/362 (44%), Gaps = 63/362 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C S C+ + CD DCS+G DE C+ Q C G+CIP ++C
Sbjct: 65 CRTGYVPCLSEGTCIPNTWVCDHDQDCSDGSDEQHCPETTCSSNQMRCSNGECIPSEYRC 124
Query: 225 DGFVDCLE------------------------------------DGSDEPNTCIHQCFNG 248
D DC + D SDE N C + C
Sbjct: 125 DHVTDCSDESDEKHCQYPRCEQLTCANGACYNTSQRCDSLVDCRDHSDEMN-CTNVCLRD 183
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+ C + +CIP ++CD E DC D++DE + C Q C+ S +CI N
Sbjct: 184 EFACN-NGQCIPKTYVCDHEEDCE-----DSSDEHDCNYQTCNGSQFTCS-SGRCIHQNQ 236
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD + DC D DE+ + S+++ C P + C S QC+ + K CDG DC
Sbjct: 237 VCDGQADCK-----DGEDENGCE--SNSSSNCAPRQWVCPGSGQCIPIDKVCDGFSDCPG 289
Query: 369 GEDEG-----PFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECL 420
G+DE FC+ C L C H+C TPRG CFCP G + + C + D+C
Sbjct: 290 GKDENSTTTESFCDTSI-CSALNCEHQCHKTPRGGACFCPPGFVINHMDMRTCDEFDDCQ 348
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
I G CDQ C N H C C EGY L + ++C A N +P SIIFS+ D+ ++
Sbjct: 349 IWGICDQKCENRHGHIRCFCEEGYILENE-QNCKA-NDSSGQP-SIIFSNGQDLLIGDVH 405
Query: 481 GS 482
G+
Sbjct: 406 GT 407
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/305 (35%), Positives = 136/305 (44%), Gaps = 33/305 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESW 222
+C P++ C +++C+ LS CDG DC++G DE C CT QF C KCIP +
Sbjct: 1143 MCQPSQFTC-PNHRCIDLSFVCDGDKDCADGSDEFG-CVLNCTASQFKCVSEEKCIPITN 1200
Query: 223 KCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC D SDE P C + + QC CIP W CD DC +
Sbjct: 1201 HCDGVFDC-SDNSDEAGCPTRPPGMCHSNEFQCQEDGICIPKTWECDGHPDCLSGS---- 1255
Query: 280 TDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D+ H C + + CI WLCDE+ DC D +DE +
Sbjct: 1256 -----DEHHGCVPKTCHSSHFRCDNGNCISREWLCDEDNDCG-----DQSDE---RNCPT 1302
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPT 394
C +C N CV L CD DC +G DE P CN N C+H+C
Sbjct: 1303 QPFQCPRGMWQCPGYNFCVKLESVCDNVFDCPSGTDESPLCNEDLCSRFNGGCTHRCIQD 1362
Query: 395 PRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
GA C CP G N +KT C D +EC I G C Q C N S+ CSC Y L DGK
Sbjct: 1363 SFGARCLCPPGYLLANDSKT-CEDINECDIPGFCSQHCYNMRGSFRCSCDNEYMLEGDGK 1421
Query: 452 SCTAV 456
+C
Sbjct: 1422 TCKVT 1426
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/345 (33%), Positives = 155/345 (44%), Gaps = 37/345 (10%)
Query: 157 DGSHNAVLCHPNELRCGS------SNQCVALSKFCDGKPDCSN--GEDEGPFC-NAECTP 207
DGS C E C S + +C++ CD DC + EDE C N CT
Sbjct: 2841 DGSDEPATCEHPERTCPSDDFKCDNGRCISRHWICDSDNDCGDMSDEDERHHCENRNCTS 2900
Query: 208 GQFSC-----GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
+F C KCIP++W CDG DC DG DE C C + C+ CIP
Sbjct: 2901 SEFWCVNSSPPARKCIPQTWVCDGDADC-ADGYDERQNCTRSSCSENEFTCSYGL-CIPS 2958
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++ CD DC D +DE + C Q C + +CI +++CDEE DC
Sbjct: 2959 SFRCDRHNDCG-----DYSDERDCLYQTCQAHQFTCQ-NGRCIFRDFVCDEENDCG---- 3008
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKA 380
D +DE D C P+ RC ++ CV + K C+ DCS+ DE G N +
Sbjct: 3009 -DGSDE-LDHLCHTPEATCPPHYFRC-NNGHCVEMEKLCNHYDDCSDNSDEKGCGINECS 3065
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYV 437
D + C H C+ T C C G +K CVD DEC C Q C N SY+
Sbjct: 3066 DPSSSGCDHNCTDTIVSFFCSCLPGYKLMSDKRTCVDIDECKERPFVCSQRCENEIGSYI 3125
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C C GY PDG+SC + EP +IFS+ +R + ++GS
Sbjct: 3126 CKCDPGYIREPDGRSCRQTS--SIEPY-LIFSNRYYLRNLTVDGS 3167
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 138/322 (42%), Gaps = 50/322 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+VT N+ WP L +DY +D+LYW D+ L +E + G+ VL
Sbjct: 2524 NAKIERATLGGNFRVPIVTSNLVWPKGLTLDYEEDLLYWADASLRQIERSTLTGTQREVL 2583
Query: 165 C----HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------F 200
H + L Q + + K +N D GP
Sbjct: 2584 VSAAFHISSL--AVFGQYIYWTDMSTRKIYRANKYDGGPNGAECQCPHEGNWYLANNNKL 2641
Query: 201 C----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCAL 254
C C QF+C G+CI E WKCDG DC DGSDE H C CA
Sbjct: 2642 CIVDNGIRCNVSQFTCANGRCILEGWKCDGDNDC-GDGSDEAEYVCAFHTCSPTAFTCA- 2699
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+ +C+P+ + CD DC+ D +DE F C +++CIP ++CD
Sbjct: 2700 NGRCVPYYYRCDFYNDCA-----DGSDEAGCLFRDCNATTEFTCNNRRCIPREFVCDGRD 2754
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+C ++ D ++ H C +C ++N C+ CDG DC + DE P
Sbjct: 2755 NCRDNNTSD------ERNCPHRT--CPSGYTKCQNTNICIPRLYLCDGDNDCGDMSDENP 2806
Query: 375 -FCN-NKADCENLKCSH-KCSP 393
+C N +CS +C P
Sbjct: 2807 TYCTINTCSSSEFRCSSGRCIP 2828
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 156/353 (44%), Gaps = 68/353 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C ++N C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2772 CPSGYTKCQNTNICIPRLYLCDGDNDCGDMSDENPTYCTINTCSSSEFRCSSGRCIPQRW 2831
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC DGSDEP TC H C + +C + +CI +W+CD + DC D
Sbjct: 2832 YCDQEDDC-GDGSDEPATCEHPERTCPSDDFKCD-NGRCISRHWICDSDNDCG-----DM 2884
Query: 280 TDEDWDKFH----QCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 329
+DED ++ H C + + C S +KCIP W+CD + DC+ D DE
Sbjct: 2885 SDED-ERHHCENRNCTSSEFWCVNSSPPARKCIPQTWVCDGDADCA-----DGYDERQNC 2938
Query: 330 ------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVALS 357
+ F+ + LC P+ RC N +C+
Sbjct: 2939 TRSSCSENEFTCSYGLCIPSSFRCDRHNDCGDYSDERDCLYQTCQAHQFTCQNGRCIFRD 2998
Query: 358 KFCDGKPDCSNGEDE-GPFCNN-KADC--ENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQ 412
CD + DC +G DE C+ +A C +C++ C + + N ++
Sbjct: 2999 FVCDEENDCGDGSDELDHLCHTPEATCPPHYFRCNNGHCVEMEKLCNHYDDCSDNSDEKG 3058
Query: 413 CVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
C +EC S CD CT+T +S+ CSC GY L D ++C ++ ++ P
Sbjct: 3059 C-GINECSDPSSSGCDHNCTDTIVSFFCSCLPGYKLMSDKRTCVDIDECKERP 3110
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 147/367 (40%), Gaps = 68/367 (18%)
Query: 165 CHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP+ + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3669 CHPSGDFRC-KNHVCIPLRWKCDGEDDCQDNSDEEGCVPRECTESEFRCPDQQCIPSQWL 3727
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + DC D SDE + + C QCA S CIP +W CD DC
Sbjct: 3728 CDHYDDC-GDNSDERDCELRTCHPDYFQCA-SGHCIPQDWKCDGAADCHDASDESTCPTR 3785
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C +C + CI NW CD + DC D +DE+ + + P+
Sbjct: 3786 FPNGTYCQANMFECK-NHVCIQLNWKCDGDNDCG-----DGSDEEL--HLCSDVPCESPD 3837
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----------------------------F 375
RC +N+C+ SK C+ +C +G DE
Sbjct: 3838 RFRC-DNNRCIYSSKLCNTVDNCGDGSDERAEHCHEPTHKPCTENEFKCDNGLCIPQDNV 3896
Query: 376 CNNKADCENL-----------------KCSHKCSPTPRGA-MCFCPAGQNP---NKTQCV 414
C++ DC N C C+ G +C C +G ++ C
Sbjct: 3897 CDDVNDCGNYFDETGCNVGKERTCAEKICEQNCTQLNVGGFICSCRSGFKVGAVDRNSCE 3956
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTV 472
D +EC G C Q C NT SY C C +G+ + GK C A + + ++ V
Sbjct: 3957 DINECEEFGICSQKCRNTKGSYECLCADGFRSVSEDFGKRCAA----EGDSPLLLLPDNV 4012
Query: 473 DIRRIHL 479
IR+ +L
Sbjct: 4013 RIRKYNL 4019
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 105/213 (49%), Gaps = 18/213 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C + C + +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3462 CSSTQFLCANEEKCIPIWWKCDGQRDCSDGSDESAHCPQRFCRIGQFQCKDGNCTSPQTL 3521
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE ++ H+C + + QCA +K+CIP +W CD + DD DN+D
Sbjct: 3522 CNARPDC-PDGSDEVSSLCENHKCESNEWQCA-NKRCIPEHWQCD-----TLDDCGDNSD 3574
Query: 282 EDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
ED C GQ +C + CIP +W CD + DC D +DE + +
Sbjct: 3575 EDRSHCASRTCKPGQFKCD-NGHCIPQSWKCDVDNDCG-----DYSDEPVQECLTPAYRC 3628
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C++ S C+G DC + DE
Sbjct: 3629 NNLTEFSCKTNYRCISKSAVCNGFDDCRDNSDE 3661
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 139/354 (39%), Gaps = 93/354 (26%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
++E++ + G R LV+ S V +YW D S + + DG N
Sbjct: 2568 RQIERSTLTGTQREVLVSAAFHISSLAVFG---QYIYWTDMSTRKIYRANKYDGGPNGAE 2624
Query: 165 CH------------------PNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPF 200
C N +RC S +C+ CDG DC +G DE +
Sbjct: 2625 CQCPHEGNWYLANNNKLCIVDNGIRCNVSQFTCANGRCILEGWKCDGDNDCGDGSDEAEY 2684
Query: 201 CNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------------------- 239
A C+P F+C G+C+P ++CD + DC DGSDE
Sbjct: 2685 VCAFHTCSPTAFTCANGRCVPYYYRCDFYNDC-ADGSDEAGCLFRDCNATTEFTCNNRRC 2743
Query: 240 ----------------------TCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
C H+ C +G +C + CIP +LCD + DC
Sbjct: 2744 IPREFVCDGRDNCRDNNTSDERNCPHRTCPSGYTKCQNTNICIPRLYLCDGDNDCG---- 2799
Query: 277 VDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ + + C + + +C+ S +CIP W CD+E DC D +DE
Sbjct: 2800 -DMSDENPTYCTINTCSSSEFRCS-SGRCIPQRWYCDQEDDCG-----DGSDE--PATCE 2850
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
H C ++ +C + +C++ CD DC + DE + + CEN C+
Sbjct: 2851 HPERTCPSDDFKC-DNGRCISRHWICDSDNDCGDMSDE----DERHHCENRNCT 2899
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/300 (32%), Positives = 133/300 (44%), Gaps = 57/300 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVLC- 165
+E + + G NR P+ + + +P ++ I +D +YW D + TVE + GS+ VL
Sbjct: 3339 IEYSDLEGHNRHPVYDQTLPYPFAVTI--FEDTIYWTDWNTRTVEKGNKYHGSNRVVLVN 3396
Query: 166 -----------HPNEL-----RCGSSN-QCVALSKFCDGK-------PDCSN-----GED 196
HP CG++N C L +G PD N GE
Sbjct: 3397 TTHRPFDIHVYHPYRQPKVDNPCGTNNGGCSHLCLIKEGGKGFTCECPDDFNTVFWHGE- 3455
Query: 197 EGPFCNAECTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCAL 254
+C C+ QF C KCIP WKCDG DC DGSDE C + C GQ QC
Sbjct: 3456 --TYCIPACSSTQFLCANEEKCIPIWWKCDGQRDC-SDGSDESAHCPQRFCRIGQFQCK- 3511
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDE 312
C LC+ DC D +DE + H+C + + QCA +K+CIP +W CD
Sbjct: 3512 DGNCTSPQTLCNARPDCP-----DGSDEVSSLCENHKCESNEWQCA-NKRCIPEHWQCD- 3564
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DD DN+DED S C P + +C + C+ S CD DC + DE
Sbjct: 3565 ----TLDDCGDNSDEDRSHCASRT---CKPGQFKC-DNGHCIPQSWKCDVDNDCGDYSDE 3616
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 133/339 (39%), Gaps = 68/339 (20%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDG 226
C +C+ CD DC +G DE C Q++C CIP++W CD
Sbjct: 1066 FACAHGGECIPEVWHCDRYKDCVDGSDEQNCPTRRPILCPESQYTCDNHNCIPKNWLCDT 1125
Query: 227 FVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC DGSDE N T C Q C + +CI +++CD + DC+ D +DE +
Sbjct: 1126 DNDC-GDGSDEKNCTSTEMCQPSQFTCP-NHRCIDLSFVCDGDKDCA-----DGSDE-FG 1177
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
C Q +C +KCIP CD DCS DN+DE + +CH NE
Sbjct: 1178 CVLNCTASQFKCVSEEKCIPITNHCDGVFDCS-----DNSDEAGCP--TRPPGMCHSNEF 1230
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA------DCENLKC------------ 387
+C C+ + CDG PDC +G DE C K C+N C
Sbjct: 1231 QCQEDGICIPKTWECDGHPDCLSGSDEHHGCVPKTCHSSHFRCDNGNCISREWLCDEDND 1290
Query: 388 -----SHKCSPT-----PRGA-------MCF-----------CPAGQNPNKTQCVDADEC 419
+ PT PRG C CP+G +++ + D C
Sbjct: 1291 CGDQSDERNCPTQPFQCPRGMWQCPGYNFCVKLESVCDNVFDCPSGT--DESPLCNEDLC 1348
Query: 420 -LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C C C GY L D K+C +N
Sbjct: 1349 SRFNGGCTHRCIQDSFGARCLCPPGYLLANDSKTCEDIN 1387
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 112/283 (39%), Gaps = 82/283 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ CD DC + DE + C PGQF C G CIP+SW
Sbjct: 3544 CESNEWQC-ANKRCIPEHWQCDTLDDCGDNSDEDRSHCASRTCKPGQFKCDNGHCIPQSW 3602
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA-------------LSKK------------ 257
KCD DC D SDEP + +C +C +SK
Sbjct: 3603 KCDVDNDC-GDYSDEP---VQECLTPAYRCNNLTEFSCKTNYRCISKSAVCNGFDDCRDN 3658
Query: 258 -----------------------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
CIP W CD E DC DN+DE+ +C +
Sbjct: 3659 SDEQGCEERTCHPSGDFRCKNHVCIPLRWKCDGEDDCQ-----DNSDEEGCVPRECTESE 3713
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C ++CIP WLCD DC DN+DE CHP+ +C +S C+
Sbjct: 3714 FRCP-DQQCIPSQWLCDHYDDCG-----DNSDER-----DCELRTCHPDYFQC-ASGHCI 3761
Query: 355 ALSKFCDGKPDCSNGEDE---------GPFCN-NKADCENLKC 387
CDG DC + DE G +C N +C+N C
Sbjct: 3762 PQDWKCDGAADCHDASDESTCPTRFPNGTYCQANMFECKNHVC 3804
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 20/168 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C F C G+CIP SW+CD DC +D SDE C G V C CIP+ W+
Sbjct: 26 CDSDHFRCNNGQCIPASWRCDTTKDCSDD-SDEHGCPPPSCRTGYVPCLSEGTCIPNTWV 84
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
CD + DCS D +DE C + Q++C+ + +CIP + CD DCS D
Sbjct: 85 CDHDQDCS-----DGSDEQHCPETTCSSNQMRCS-NGECIPSEYRCDHVTDCS-----DE 133
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE +Y + C ++ C S+ CD DC + DE
Sbjct: 134 SDEKHCQYPRCEQLTC--------ANGACYNTSQRCDSLVDCRDHSDE 173
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 80/177 (45%), Gaps = 30/177 (16%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP------NTCIHQCFNGQVQCALSKKC 258
C F C +C+ + C+G DC D SDE NTC F CA +C
Sbjct: 1020 CGEFSFLCNNSRCLSDVLVCNGVDDC-HDNSDELHCMLPNNTCPRMMF----ACAHGGEC 1074
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
IP W CD DC VD +DE + C Q C + CIP NWLCD + D
Sbjct: 1075 IPEVWHCDRYKDC-----VDGSDEQNCPTRRPILCPESQYTCD-NHNCIPKNWLCDTDND 1128
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C D +DE + +C P++ C +++C+ LS CDG DC++G DE
Sbjct: 1129 CG-----DGSDEK----NCTSTEMCQPSQFTC-PNHRCIDLSFVCDGDKDCADGSDE 1175
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M+GE+R+ LV+ + WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4159 KIESAWMNGEHRTVLVSNYLGWPTGLTIDYLNDDRIYWSDFKEDIIETMKHDGTVRRVVS 4218
Query: 166 H 166
H
Sbjct: 4219 H 4219
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ + GM G N+S +++ I P+ + IDY D+LYW DSHL +E ++G HN
Sbjct: 3296 IGRVGMDGTNKSVIISTKIMRPNGITIDYTNDLLYWTDSHLGYIEYSDLEG-HN 3348
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T TLA+++ RN + + ++ + +L S ++ P LD R+
Sbjct: 1506 TETLAVDWVGRNLYWTDYALETIEVAKIDGSH-RTVLISKNVTNPRGLALDPRMNEHVLF 1564
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G +R+ ++ I WPS L IDY +LY+ D++L+ ++ +G
Sbjct: 1565 WSDWGQHPRIERASMDGTSRTVIIQNKIHWPSGLTIDYPNRLLYFMDAYLDYIDYCDYNG 1624
Query: 159 SH 160
H
Sbjct: 1625 HH 1626
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E + ++E+A M G NR LV + +P + +D +YW DS + +E+V DG
Sbjct: 524 ESLSGEPKVERAFMDGSNRKDLVKTKLGFPGGITLDLIAKRVYWVDSRYDYIETVTYDGI 583
Query: 160 HNAVLCHPNEL 170
+ H L
Sbjct: 584 QRKTVMHGGSL 594
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 12/131 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP--------APEIFP 103
+ +LA ++ RN ++VS +RL ++ P A IF
Sbjct: 777 VENVESLAFDWISRNLYWTDSHYKSVSVMRLADKSRRTIVPLLSNPRSIVVHPVAGYIFF 836
Query: 104 LD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
D ++ +A G + P+V + WP+ L ID++ LYW D+ + +E +G
Sbjct: 837 SDWFRPAKIMRAWGDGSHLLPIVNTTLGWPNGLAIDWDALRLYWVDAFFDKIEHSTFNGL 896
Query: 160 HNAVLCHPNEL 170
+L H E+
Sbjct: 897 DRRILSHIEEM 907
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 35/136 (25%)
Query: 36 IVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCF---IQQQNVSSVRLRCAQINDLLN 92
I DN + I +G+H +A++F+ + + IQ++ S+
Sbjct: 1442 IADNVTSQVHSVYPLIQDGSHIIAVDFDSVTGRIFWSDAIQRKTWSA------------- 1488
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
FP +G +R + N+ +L +D+ LYW D L T+E
Sbjct: 1489 ---------FP----------NGTDRRVVFDSNVVLTETLAVDWVGRNLYWTDYALETIE 1529
Query: 153 SVRVDGSHNAVLCHPN 168
++DGSH VL N
Sbjct: 1530 VAKIDGSHRTVLISKN 1545
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + NR+ LV+ I P L ID++ +YW D L+ + + DG V+
Sbjct: 2209 KIERSFLDCTNRTVLVSDGIVSPRGLAIDHSSGYIYWVDDSLDLIARIHFDGEETQVI 2266
>gi|410897255|ref|XP_003962114.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Takifugu rubripes]
Length = 3996
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/293 (35%), Positives = 142/293 (48%), Gaps = 34/293 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-----IHQCFNGQVQCALS 255
C C QF C G+CIP+ W CDG DC D SDE TC + +C + C
Sbjct: 949 CARSCANTQFQCASGRCIPDHWACDGDNDC-GDYSDENTTCRVLPSVIECSEEEFHCVTD 1007
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF---NGQVQCALSKKCIPHNWLCDE 312
CIP W CD + DC D DED + + + C + KCI +W+CD
Sbjct: 1008 GTCIPERWRCDGDKDCE-----DGGDEDGCEGTRRMCDPKAKFTCKDTGKCITKSWVCDG 1062
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGED 371
++DC D +DE+ S +C P + C + ++ C+ K C+GK DC++ D
Sbjct: 1063 DIDCE-----DRSDEE-----SCETAVCKPPKYPCANDTSVCLTPDKICNGKVDCADRSD 1112
Query: 372 EGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQ 427
EGP C+ CSH+C+ P +G +CFCP G + NKT C D C C Q
Sbjct: 1113 EGPICD-LCLVARGGCSHQCTVAPGKGVVCFCPPGLHLDSSNKT-CEVVDYCSRHLKCSQ 1170
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C + CSC G+TL PDG SC + + + A IIFS +IRRI L+
Sbjct: 1171 LCEQYKTTVKCSCYPGWTLDPDGDSCHSTDPFE---AFIIFSIRHEIRRIDLH 1220
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSN 351
G+ C K CIP WLCD E DC D++DE D +H V+ C N ++C +
Sbjct: 62 GEFHCRDGKTCIPEAWLCDGEPDCP-----DDSDES-DVICTHQVVVRCPLNHIQCIGTK 115
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--QNP 408
+C+ +K C+G DC +G DEG C + C L+C + C T G CFC G
Sbjct: 116 KCIHFNKLCNGARDCEDGFDEGVHCRELLSACHELRCRYGCVMTRNGTFCFCADGFEVGE 175
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+ T C D DEC G+C QTC NT+ SY CSCTEGY L+PD SC A
Sbjct: 176 DGTSCRDHDECATYGACSQTCRNTYGSYSCSCTEGYVLQPDRISCRA 222
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 108/367 (29%), Positives = 157/367 (42%), Gaps = 64/367 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C C S N C++ CDG+ DC +G DE C++ C QF+C KCI + W C
Sbjct: 2626 CEEGHFACPSGN-CISSVWLCDGQKDCEDGADEFQ-CDSSCLWNQFACSKNKCIAKQWLC 2683
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV--- 277
DG DC EDG DE C G C S C+P WLCD E DC +D++
Sbjct: 2684 DGENDC-EDGLDESAEICGSVTCAPGLFSCPSSYGCVPQRWLCDGERDCPDGSDELAAAG 2742
Query: 278 ---DNTDEDWD-------------------------------KFHQCFNGQVQCALSKKC 303
+NT +D + C + + +C +
Sbjct: 2743 CAPNNTCDDSSFRCNNKACVPQRFVCDHDDDCGDGSDESLECVYRSCGSEEFRCRDGRCL 2802
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+ W CD DC D++DE + LC+ + C S+ +C++ CDG
Sbjct: 2803 LSSQWECDGYADCP-----DHSDELPLNLKCLAAGSLCNGSFFMC-SNGRCISERSLCDG 2856
Query: 363 KPDCSNGEDEGPFCNNKADCENLK---CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDA 416
+ DC + DE N +C N + C+ C P G C C G ++ KT CVD
Sbjct: 2857 RDDCGDRSDERNC--NLNECLNRRVSGCTQDCQDFPVGYKCKCWPGFHLKDDGKT-CVDV 2913
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGY-TLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C NT+ S+ C C +GY L +C A++ E +I + +IR
Sbjct: 2914 DECAATLPCSQRCINTYGSFKCLCVDGYEALERSPNTCKALSA---EEPFLIMADHHEIR 2970
Query: 476 RIHLNGS 482
++ ++GS
Sbjct: 2971 KLSVDGS 2977
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 130/296 (43%), Gaps = 46/296 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD--------SHLNT------ 150
D + A M G R + ++IQ +L + +D +YW D +H T
Sbjct: 3137 DNHILLANMDGTQRRKVAYEHIQGVMALTL--FEDFVYWTDGKSKSLRRAHKTTGTQGIE 3194
Query: 151 -------VESVRVDGS--HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEG 198
++S++V S V H ++ G + LS K C +
Sbjct: 3195 LLNSWQAIKSIKVYHSLRQPEVTKHQCQIANGGCSHLCLLSPGGGHKCACPTNFYLAADN 3254
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF CG +CIP WKCD DC DGSDEP C +C G+ QC
Sbjct: 3255 KTCLSNCTSSQFRCGTDECIPFWWKCDTVDDC-GDGSDEPADCPEFKCQPGRFQCGTGLC 3313
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DN+DE + + C +GQ +C +KCIP N C+ + DC
Sbjct: 3314 ALPP-FICDGENDCG-----DNSDEANCETYICLSGQFKCTRKQKCIPLNLRCNGQNDCG 3367
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D D TD C P++ +C +S C++ CD PDC++G DE
Sbjct: 3368 --DGEDETD--------CPESTCSPDQFQCKASMHCISKLWVCDEDPDCADGSDEA 3413
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3380 CSPDQFQCKASMHCISKLWVCDEDPDCADGSDEANCDEKTCGPHEFRCENNNCIPDHWRC 3439
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC ++ +E P TC H+ F CA + CI + CD + DC +DN+D
Sbjct: 3440 DSQNDCGDNSDEESCKPVTCNHKEF----ACA-NGDCISSRFRCDGDYDC-----LDNSD 3489
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-- 339
E + +C + Q QC L+ CI WLCD + DC + D+ VL
Sbjct: 3490 ERGCE-ERCADDQFQC-LNNLCILLKWLCDGQEDCKMGE---------DERSCQGTVLPT 3538
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C NE C S CV+ S CDG +C +G DE
Sbjct: 3539 CSLNEYVCASGG-CVSASLRCDGHDNCLDGSDE 3570
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 98/235 (41%), Gaps = 46/235 (19%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQFSCGMGKCIPESWKCDGFVDCL 231
N C+ L CDG+ DC GEDE C P ++ C G C+ S +CDG +CL
Sbjct: 3507 NLCILLKWLCDGQEDCKMGEDERS-CQGTVLPTCSLNEYVCASGGCVSASLRCDGHDNCL 3565
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
DGSDE C+ +C + C CIP W CDE DC +D++DE+ C
Sbjct: 3566 -DGSDEIG-CVKECREDEFLCLNRAHCIPRRWRCDEVFDC-----MDHSDEE-----NCS 3613
Query: 292 NGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
G C + C H W+CD DC DN+DED D P
Sbjct: 3614 QGASFCRADEFICNNTLCKLHMWVCDGRDDCG-----DNSDEDADMCARRPCPPTRP--F 3666
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------------GPFCNNKADCENL 385
RC + C+ + C+ DC + DE GPFC + CEN
Sbjct: 3667 RCRNDRVCLRSQQVCNKVDDCGDNSDEDECGKPTCRCPLGFSGPFCERRI-CENY 3720
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CVA S+FCDG DC + DE N C + SC G CIP S C+ +DC D SD
Sbjct: 2507 RCVANSRFCDGIDDCGDNSDEAYCSNVTCGSSESSCKDGSCIPSSAWCNQVIDC-GDASD 2565
Query: 237 EPN----TCIHQCFNGQ-----VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E + C H G + C + CI +W+CD DC D D T+
Sbjct: 2566 EKSCNHTDCSHFYKLGAKEKDFISCNSTSLCIHPSWICDGSNDCG--DYADETNCQVSHG 2623
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C G C S CI WLCD + DC D DE F ++ C N+ C
Sbjct: 2624 QKCEEGHFACP-SGNCISSVWLCDGQKDCE-----DGADE-----FQCDSS-CLWNQFAC 2671
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S N+C+A CDG+ DC +G DE
Sbjct: 2672 -SKNKCIAKQWLCDGENDCEDGLDE 2695
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 83/206 (40%), Gaps = 42/206 (20%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C G F C +CIP+ W CDG DC + + TC Q C Q C + +CIP
Sbjct: 831 NHTCPAGYFKCSNNRCIPKRWLCDGTNDCGNNEDEANGTCSAQHCQVDQFPCT-NGRCIP 889
Query: 261 HNWLCDEEMDCS--TDDI--VDNTDEDWDKF----------------------------- 287
W CD E DC +D+I T E +F
Sbjct: 890 RAWSCDREDDCGDMSDEISCTFPTCEPLTQFSCSSGRCVSAQWRCDSDDDCGDGSDEVGC 949
Query: 288 -HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C N Q QCA S +CIP +W CD + DC D +DE+ + + C E
Sbjct: 950 ARSCANTQFQCA-SGRCIPDHWACDGDNDCG-----DYSDENTTCRVLPSVIECSEEEFH 1003
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C+ CDG DC +G DE
Sbjct: 1004 CVTDGTCIPERWRCDGDKDCEDGGDE 1029
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 148/362 (40%), Gaps = 81/362 (22%)
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMHGE 116
+ +Q+ + + N+S R A + D NSW D E+ R+EKA M G
Sbjct: 576 RLDRASQTRKTLLEGNMSHPR---AIVVDPPNSWMYWTDWEEDEVNDSIGRIEKAWMDGS 632
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSN 176
NR VT N+ WP+ L +D++ +YWCD++ + +E + ++G+ V+ + EL N
Sbjct: 633 NRRIFVTSNMLWPNGLTLDHSTSTMYWCDAYYDHIEQIYLNGTGRMVVYNGKEL-----N 687
Query: 177 QCVALSKFCD-----------------GKPDCSNGEDEGP------FCNAECTPGQFSCG 213
+S + + D + E P +A+ G +CG
Sbjct: 688 HPFGISHYRNYIFWTEYMNASVFQLELSTGDVTPLRSERPPLFGLRVYDAQSQQGDNACG 747
Query: 214 M--GKC------IPESWKC---------DGFVDCLE-DGSDEPNTCIHQCFNGQVQCALS 255
+ G C IP C V C G EP + C N + QC +
Sbjct: 748 VNYGGCGTLCLAIPGGRVCACADNQVLEKNNVTCAAPAGGSEPRS----CRNDEFQCH-N 802
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN-----GQVQCALSKKCIPHNWLC 310
++CI W D D D ++ H C+N G +C+ + +CIP WLC
Sbjct: 803 QRCIRALW--------RCDGDDDCLDGSDEETHSCYNHTCPAGYFKCS-NNRCIPKRWLC 853
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC +N DE + +A C ++ C ++ +C+ + CD + DC +
Sbjct: 854 DGTNDCG-----NNEDE---ANGTCSAQHCQVDQFPC-TNGRCIPRAWSCDREDDCGDMS 904
Query: 371 DE 372
DE
Sbjct: 905 DE 906
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C+++ + +++C+ ++ CD
Sbjct: 2459 EFECGNGECINYQLTCDGVAHCKDKSDEKMQYCVNRSCRKGFRPCYNQRCVANSRFCD-- 2516
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
DD DN+DE + C + + C CIP + C++ +DC D +DE
Sbjct: 2517 ---GIDDCGDNSDEAYCSNVTCGSSESSCK-DGSCIPSSAWCNQVIDCG-----DASDEK 2567
Query: 328 -----DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D ++ A + + C S++ C+ S CDG DC + DE
Sbjct: 2568 SCNHTDCSHFYKLGAK--EKDFISCNSTSLCIHPSWICDGSNDCGDYADE 2615
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 205 CTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCI 259
C G+F C GK CIPE+W CDG DC +D + C HQ C +QC +KKCI
Sbjct: 59 CDIGEFHCRDGKTCIPEAWLCDGEPDCPDDSDESDVICTHQVVVRCPLNHIQCIGTKKCI 118
Query: 260 PHNWLCDEEMDC 271
N LC+ DC
Sbjct: 119 HFNKLCNGARDC 130
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ + M G NR+ LV I+ P+++ +D + ++YW D++L+ ++ V DG + + H
Sbjct: 291 KVARCNMDGTNRTQLVDYRIELPTAVALDVVRKLVYWADAYLDYIDVVDYDGKNRHSIVH 350
Query: 167 PNELRCGSSNQCVALSKFCD 186
+++ + ALS F D
Sbjct: 351 GSKV-----SYVYALSVFED 365
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ ++ + G ++ LV + WP+ + IDY ++ LYWCD+ + +E + ++ N
Sbjct: 1965 IGRSRLDGSDQVTLVNSGVMWPNGISIDYEENTLYWCDARTDRIEKINLETGEN 2018
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 13/135 (9%)
Query: 118 RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-----RVDGSHNAVLCHPNELRC 172
R + +I + I N + +H V ++ R+ H A+LC E C
Sbjct: 8 RGETGSGHIAESNLYAIRSNDGVKSLTAAHRKRVNALTDARYRIRDGH-AILCDIGEFHC 66
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPF-----CNAECTPGQFSC-GMGKCIPESWKCDG 226
C+ + CDG+PDC + DE C C G KCI + C+G
Sbjct: 67 RDGKTCIPEAWLCDGEPDCPDDSDESDVICTHQVVVRCPLNHIQCIGTKKCIHFNKLCNG 126
Query: 227 FVDCLEDGSDEPNTC 241
DC EDG DE C
Sbjct: 127 ARDC-EDGFDEGVHC 140
>gi|395840452|ref|XP_003793073.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Otolemur garnettii]
Length = 2159
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/376 (32%), Positives = 167/376 (44%), Gaps = 72/376 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+C+P +W
Sbjct: 807 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCVPRAW 865
Query: 223 KCDGFVDCLEDGSDE-------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CD DC D +DE C+H C Q +C+ S +CIP +W CD +
Sbjct: 866 LCDREDDC-GDQTDEMASCDDDCGDGSDEEGCVHSCSGNQFRCS-SGRCIPGHWACDGDN 923
Query: 270 DC---STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD------- 319
DC S + ++ T E+ C + QC CIP W CD E DC
Sbjct: 924 DCGDFSDETQINCTKEEIRSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCN 983
Query: 320 -------------------------------DIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
D D +DED ++ LC P + C
Sbjct: 984 GTIRLCDHKTKFSCWSTGRCINRAWVCDGDIDCEDQSDED-----DCDSFLCGPPKYPCA 1038
Query: 349 S-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQ 406
+ ++ C+ K C+G+ DC +G DEG C+ + N CS+ CS P RG +C CP G
Sbjct: 1039 NDTSVCLQPEKLCNGQRDCPDGSDEGDLCD-ECSLNNGGCSNHCSVVPGRGIVCSCPEGL 1097
Query: 407 NPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
NK C D C C Q C + CSC EG+ L DG+SCT+V+ + A
Sbjct: 1098 QLNKDNKTCEIVDYCSNHLKCSQVCEQQKHTVKCSCYEGWKLDGDGESCTSVDPFE---A 1154
Query: 465 SIIFSSTVDIRRIHLN 480
+IFS +IRRI L+
Sbjct: 1155 FLIFSIRHEIRRIDLH 1170
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C + +CV LS+ C+G DCS+G DEG C C+ L C +KC+
Sbjct: 75 IKCPFNHIACLGTKRCVHLSQLCNGVLDCSDGSDEGVHCQELLPSCQQLNCQYKCAMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
+ C+C G ++ C D DEC I G+C QTC NTH S+ CSC EGY L+PD +SC
Sbjct: 135 SSRCYCEDGFEIKEDRRSCKDQDECAIYGTCSQTCVNTHGSFACSCVEGYLLQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A N P D P ++ ++ I +LNGS
Sbjct: 195 AKNEPTDRPPLLLIANFETIEMFYLNGS 222
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 137/350 (39%), Gaps = 60/350 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
LC E RC + + A K +++ C N C QF C +CIP+ W
Sbjct: 765 LCKAGEFRCRNRHCIQARWKCDGDDDCLDGSDEDTVNCFNHSCPDDQFKCQNNRCIPKRW 824
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
CDG DC + + TC + C Q C + +C+P WLCD E DC TD++
Sbjct: 825 LCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCVPRAWLCDREDDCGDQTDEMASC 883
Query: 280 TDEDWDK------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D+ D H C Q +C+ S +CIP +W CD + DC D D T + K
Sbjct: 884 DDDCGDGSDEEGCVHSCSGNQFRCS-SGRCIPGHWACDGDNDCG--DFSDETQINCTKEE 940
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------------------- 373
+ C+ NE +C C+ CDG+ DC +G DE
Sbjct: 941 IRSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWST 1000
Query: 374 PFCNNKA----------------DCENLKCSHKCSP-TPRGAMCFCPAGQNPNKTQCVDA 416
C N+A DC++ C P ++C P + C D
Sbjct: 1001 GRCINRAWVCDGDIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGQRDCPDG 1060
Query: 417 -------DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC L +G C C+ VCSC EG L D K+C V+
Sbjct: 1061 SDEGDLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1110
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G +R VT + WP+ L +D++ + LY
Sbjct: 572 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFSRQIFVTSKMLWPNGLTLDFHTNTLY 631
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 632 WCDAYYDHIEKVFLNGTHRKIVYSGKEL 659
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1782 IGKAHLDGSEKVILVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 1841
Query: 166 HPN 168
N
Sbjct: 1842 GNN 1844
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 350 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGQNRHTVLQ 409
Query: 167 PNELR 171
++R
Sbjct: 410 GRQIR 414
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C + +CV LS+ C+G DCS+G DEG C E P Q+ C M +
Sbjct: 75 IKCPFNHIACLGTKRCVHLSQLCNGVLDCSDGSDEGVHCQ-ELLPSCQQLNCQYKCAMVR 133
Query: 217 CIPESWKCDGF 227
+ DGF
Sbjct: 134 NSSRCYCEDGF 144
>gi|293597511|ref|NP_037287.2| very low-density lipoprotein receptor precursor [Rattus norvegicus]
Length = 873
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 167/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 ITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|355750598|gb|EHH54925.1| hypothetical protein EGM_04032 [Macaca fascicularis]
Length = 4509
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 142/314 (45%), Gaps = 41/314 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KC 217
+H C + C ++QC++ + CD DC +G DE C CT QF C G KC
Sbjct: 1194 THAPASCLDTQYTC-DNHQCISKNWVCDTDNDCGDGSDEKN-CILNCTASQFKCASGDKC 1251
Query: 218 IPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
I + +CDG DC D SDE P C + + QC CIP+ W CD DC
Sbjct: 1252 ISVTNRCDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC--- 1307
Query: 275 DIVDNTDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ +DE + C NG CI WLCD + DC D +D
Sbjct: 1308 --LYGSDEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSD 1352
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENL 385
E K C + +C N CV LS CDG DC NG DE P CN N N
Sbjct: 1353 E---KDCPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNG 1409
Query: 386 KCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
C+H+C P GA C CP G N +KT C D DEC I GSC Q C N S+ C+C
Sbjct: 1410 GCTHECVQEPFGAKCLCPLGFLLANDSKT-CEDIDECDIPGSCSQHCYNMRGSFRCACDT 1468
Query: 443 GYTLRPDGKSCTAV 456
GY L DG++C
Sbjct: 1469 GYMLESDGRTCKVT 1482
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 164/412 (39%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2830 CQSGYTTCQNSNICIPRIYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCTSGRCIPQHW 2889
Query: 223 KCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD +DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2890 YCDQEIDCF-DASDEPASCGHPERTCLADEFKCD-RGRCIPSEWICDGDNDCG-----DM 2942
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE D+ HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2943 SDE--DERHQCHNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2995
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2996 CTRRTCSENEFTCGYGLCIPEIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3055
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3056 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3115
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC C Q C
Sbjct: 3116 GCGVNECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTETPFVCSQKC 3175
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3176 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3224
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 165/417 (39%), Gaps = 110/417 (26%)
Query: 47 YFKRILNGT-HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN-DLLNSWDLPAPEIFPL 104
++ IL G + +AL+F+ + L +I Q R+ + N + + + LPA E +
Sbjct: 3226 FYSLILEGLGNVVALDFDRVEKRLYWIDTQRQVIERMFLNKTNKETIINHRLPAAESLAV 3285
Query: 105 D--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH--- 147
+ + + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3286 EWVSRYIYWADWGHRAYIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGY 3345
Query: 148 --------------------------------------LNTVESV-RVDGSHNAVLC--- 165
TVE + DGS+ L
Sbjct: 3346 IEYSDLEGHRRHTVYDGSLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTT 3405
Query: 166 ---------HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------ 199
HP CG++N S C KP E P
Sbjct: 3406 HRPFDIHVYHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGST 3463
Query: 200 FCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKK 257
+C C+ QF C KCIP WKCDG DC DGSDE C + C GQ QC
Sbjct: 3464 YCMPMCSSTQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCN-DGN 3521
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
C LC+ +C D +DED + H C + + QC +K+CIP +W CD D
Sbjct: 3522 CTSPQTLCNAHQNCP-----DGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFND 3575
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C DN+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3576 CE-----DNSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3623
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 103/225 (45%), Gaps = 26/225 (11%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1128 RCVPSYYRCDGVNDCHDNSDEQLCGTLNNTCSSSAFTCGNGECIPTHWRCDKRNDCV-DG 1186
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
SDE N H C + Q C + +CI NW+CD + DC D +DE + C
Sbjct: 1187 SDERNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEK-NCILNCT 1239
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +CA KCI CD DCS DN+DE + +CH +E +C
Sbjct: 1240 ASQFKCASGDKCISVTNRCDGVFDCS-----DNSDEAGCP--TRPPGMCHSDEFQCQEDG 1292
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKA------DCENLKCSHK 390
C+ CDG PDC G DE C K C+N C H+
Sbjct: 1293 ICIPNFWECDGHPDCLYGSDEHNACVPKTCPSSYFHCDNGNCIHR 1337
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3468 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCNDGNCTSPQT 3527
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QC +K+CIP +W CD DC DN+
Sbjct: 3528 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCT-NKRCIPESWQCDTFNDCE-----DNS 3580
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3581 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3634
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3635 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3668
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCS 388
SH C P E C S +C+++ K CDG DC EDE G +C+ C L C
Sbjct: 377 SHGVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENSTTTGKYCSTTL-CSALNCQ 435
Query: 389 HKCSPTPRGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
++C TP G CFCP G N CV+ D+C I G CDQ C + ++C C EGY
Sbjct: 436 YQCHETPYGGACFCPPGYTINHNDSRTCVEFDDCQIWGICDQKCESRPGHHLCHCEEGYI 495
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
L G+ C A + + ASIIFS+ D+ ++G
Sbjct: 496 LE-RGQHCKANDSFGE--ASIIFSNGRDLLIGDIHG 528
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/342 (29%), Positives = 137/342 (40%), Gaps = 60/342 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3676 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3734
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+P CD DC +D +DE
Sbjct: 3735 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVPSELKCDGTADC-----LDASDEA 3787
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ C +C + CIP W D D + + N
Sbjct: 3788 DCPTRFPDGAYCQATMFECK-NHVCIPPYWK-------CDGDDDCGDGSDEELHLCLNVP 3839
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
PN RC +N+C+ + C+G DC +G DE H PTP+
Sbjct: 3840 CNSPNRFRC-DNNRCIYGHEVCNGVDDCGDGTDETE-------------EHCRKPTPKPC 3885
Query: 399 MCF---CPAGQ-NPNKTQCVDAD--------------ECLIDGSCDQTCTNTHLSYVCSC 440
+ C G PN C DAD EC G+C Q C NT SY C C
Sbjct: 3886 TEYEYKCGNGHCIPNDNVCDDADDCGDWSDELGCNINECEQFGTCPQHCRNTKGSYECVC 3945
Query: 441 TEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+G+T D GK C A + ++ V IR+ +L+
Sbjct: 3946 ADGFTSMSDHPGKRCAA----EGSSPLLLLPDNVRIRKYNLS 3983
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 114/273 (41%), Gaps = 71/273 (26%)
Query: 168 NELRCGSSN------QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIP 219
N RCG+S+ +C++ CD DC +G DE A C+P F+C G+C+
Sbjct: 2704 NGERCGASSFTCSNGRCISKEWKCDNDNDCGDGSDEMESVCALHTCSPTAFTCANGRCVQ 2763
Query: 220 ESWKCDGFVDCLEDGSDEP-----------------NTCI-------------------- 242
S++CD + DC DGSDE CI
Sbjct: 2764 YSYRCDYYNDC-GDGSDEAGCLFRDCNATTEFMCNNRRCIPREFVCNGVDNCHDNNTSDE 2822
Query: 243 -----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQV 295
C +G C S CIP +LCD + DC DN+DE+ + H C + +
Sbjct: 2823 KNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCG-----DNSDENPTYCTTHTCSSSEF 2877
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC S +CIP +W CD+E+DC D +DE H C +E +C +C+
Sbjct: 2878 QCT-SGRCIPQHWYCDQEIDC-----FDASDE--PASCGHPERTCLADEFKC-DRGRCIP 2928
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
CDG DC + DE + + C N CS
Sbjct: 2929 SEWICDGDNDCGDMSDE----DERHQCHNQNCS 2957
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3551 CDSNEWQC-TNKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3609
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3610 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3668
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3669 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3722
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3723 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVPS 3770
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3771 ELKCDGTADCLDASDEA 3787
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 25/219 (11%)
Query: 177 QCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
+C+ C+G +C +N DE + C G +C CIP + CDG DC ++
Sbjct: 2800 RCIPREFVCNGVDNCHDNNTSDEKNCPDRTCQSGYTTCQNSNICIPRIYLCDGDNDCGDN 2859
Query: 234 GSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---Q 289
+ P C H C + + QC S +CIP +W CD+E+DC D +DE H
Sbjct: 2860 SDENPTYCTTHTCSSSEFQCT-SGRCIPQHWYCDQEIDC-----FDASDEPASCGHPERT 2913
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + +C +CIP W+CD + DC D +DED +++ HN C +E C +
Sbjct: 2914 CLADEFKCD-RGRCIPSEWICDGDNDCG-----DMSDED-ERHQCHNQN-CSDSEFLCVN 2965
Query: 350 ----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+C+ S CDG DC++G DE C + EN
Sbjct: 2966 DRPPDRRCIPQSWVCDGDVDCTDGYDENQNCTRRTCSEN 3004
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 26/176 (14%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P ++CDG DC D SDE T + C + C + +CIP
Sbjct: 1116 QCGIFSFPCKNGRCVPSYYRCDGVNDC-HDNSDEQLCGTLNNTCSSSAFTCG-NGECIPT 1173
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1174 HWRCDKRNDC-----VDGSDERNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1226
Query: 319 DDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE N +L C ++ +C S ++C++++ CDG DCS+ DE
Sbjct: 1227 ----DGSDE-------KNCILNCTASQFKCASGDKCISVTNRCDGVFDCSDNSDEA 1271
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 107/280 (38%), Gaps = 44/280 (15%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V
Sbjct: 2536 MHAKIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQKIERSTLTGMDREV 2595
Query: 164 LCHPNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-E 220
+ + G + Q + + + +N D G+ + +
Sbjct: 2596 IVNAAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQ 2655
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCST 273
+C+ + G C H C G + QC PH NW L + C
Sbjct: 2656 KEQCNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC-- 2700
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
IVDN + C NG +CI W CD + DC D +DE
Sbjct: 2701 --IVDNGERCGASSFTCSNG--------RCISKEWKCDNDNDCG-----DGSDEMESVCA 2745
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H C P C ++ +CV S CD DC +G DE
Sbjct: 2746 LHT---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2781
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 26/123 (21%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 87 KCDSEHFRCGSGHCIPADWRCDGTKDCSDD-TDEIGCAVVTCQQGYFKCQSEGQCIPNSW 145
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE CS C + Q+ C+ + +CIP + CD
Sbjct: 146 VCDQDQDCDDGSDEHQGCSQS--------------TCSSHQITCS-NGQCIPGEYRCDHV 190
Query: 314 MDC 316
DC
Sbjct: 191 RDC 193
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4069 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4128
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4129 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4180
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 652 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 711
Query: 165 CHPNEL 170
H L
Sbjct: 712 VHGGSL 717
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 159 SHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GM 214
SH AV+ C RCGS C+ CDG DCS+ DE C G F C
Sbjct: 79 SHKAVVRIKCDSEHFRCGSG-HCIPADWRCDGTKDCSDDTDEIGCAVVTCQQGYFKCQSE 137
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDC 271
G+CIP SW +DGSDE C C + Q+ C+ + +CIP + CD DC
Sbjct: 138 GQCIPNSW-VCDQDQDCDDGSDEHQGCSQSTCSSHQITCS-NGQCIPGEYRCDHVRDC 193
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1562 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1620
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1621 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYIDFCDYNG 1680
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1681 HHRKQVIASDLIIRHPYAL 1699
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2118 YWCDFSSSVTSDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2177
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2178 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2237
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2238 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2279
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPE 220
V C +C S QC+ S CD DC +G DE C+ + C+ Q +C G+CIP
Sbjct: 124 VVTCQQGYFKCQSEGQCIPNSWVCDQDQDCDDGSDEHQGCSQSTCSSHQITCSNGQCIPG 183
Query: 221 SWKCDGFVDCLEDGSDE 237
++CD DC DG+DE
Sbjct: 184 EYRCDHVRDC-PDGADE 199
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1544 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1601
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 745 NKFAETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 799
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 800 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 839
>gi|194769522|ref|XP_001966853.1| GF19243 [Drosophila ananassae]
gi|190618374|gb|EDV33898.1| GF19243 [Drosophila ananassae]
Length = 1958
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 154/335 (45%), Gaps = 32/335 (9%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIP 219
+AV C RC SS C+ CDGK DCS+G DE C C P C +G+C+
Sbjct: 1152 SAVGCEEGMFRC-SSGSCLPAGWECDGKIDCSDGSDEHDKCGRRSCPPEMHRCLLGQCLD 1210
Query: 220 ESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDCST 273
+ C+G DC DGSDE N C + QC + + C+P C+ +C
Sbjct: 1211 KKLICNGHNDC-GDGSDELNCSDEAKSNLSCPAEKFQCTSNPRICLPGRTRCNGTAECP- 1268
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIV-------DN 324
+++ D C + QC +CI + CD + DC+ +D++ N
Sbjct: 1269 -----RGEDEADCGDMCGIEEFQCRSGGQCIRREFRCDGDRDCTDGSDELACELVIKNRN 1323
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
E S + C + C +CV +S+ C+G PDCSNG DEGP C C
Sbjct: 1324 QTEGIRPEASPSGRPCRASLFDCRDGQECVDMSRVCNGFPDCSNGMDEGPQCTTA--CSK 1381
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
C HKC TP GA+C C G + Q CVD DEC C Q C NT SY C C
Sbjct: 1382 SSCQHKCRATPSGAICSCHDGYRLDGDQRSCVDVDECQEQQPCAQLCENTLGSYQCQCHA 1441
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
+ LR D SC +++ ++++F+S ++R +
Sbjct: 1442 DFMLRQDRVSCKSLHA----ASALLFTSYNEVRNM 1472
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 160/373 (42%), Gaps = 57/373 (15%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
+L C + L T GS +A C + RC C+ L+K CDG DC +G DE
Sbjct: 72 MLLLCGAILATAA-----GSQDAGTCEAGQFRC-RDGGCILLAKMCDGHGDCKDGTDELD 125
Query: 200 FCNAECT-PGQFSCG--MGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQ----CFNG 248
C P F C G C+ C+G +C G DE N T Q C +
Sbjct: 126 CDYRLCREPHWFPCAPPHGACLAVEIMCNGIDNC-PGGEDELNCPGRTLFPQRRRNCSSS 184
Query: 249 QVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDEDWD-----KFHQCFNGQVQCALSK 301
+ C + C+P +CD DCS +D++ + + + H C NG+ C +
Sbjct: 185 EWTCQQDRTCLPLELMCDGRADCSDRSDELAGCERQKTEANCPPEGHLCPNGR--CLRRR 242
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP--NELRCGSSNQCVALSKF 359
+ WLCD DC D +DE + LC P + C + C+ LS
Sbjct: 243 Q-----WLCDGHDDCG-----DGSDEKGCEN------LCQPQMGKFMCRNKEACLPLSDA 286
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKC--SHKCSPTPR-GAMCFCPAG--QNPNKTQCV 414
CDG DCS+ DE C++ DC+ KC + C P GA C CP G Q + +CV
Sbjct: 287 CDGHRDCSDDSDEAEGCHSPPDCKTKKCPPNATCHMMPSGGAECHCPVGFRQAKFEDKCV 346
Query: 415 DADECLIDGS-----CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ--DEPASII 467
D DEC C Q C N + C C EGY L D ++C A+ D+ ++
Sbjct: 347 DIDECQESEQEQRDVCSQKCENQSGGFQCVCDEGYHLARDNRTCRAMATSSSTDQAPLLL 406
Query: 468 FSSTVDIRRIHLN 480
+++ + + +HL
Sbjct: 407 YTTQMTVMGMHLQ 419
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 125/269 (46%), Gaps = 48/269 (17%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--------CTPGQFSCGMG-KCIP 219
E RCGS +C+ ++ C+G DC + DE C+ E C+ QF+C G +C+
Sbjct: 1029 EFRCGS-GECLTMAHRCNGHRDCLDSSDETD-CDEEHRRRTKVMCSGRQFACHSGDQCVD 1086
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ +CDG DC +D SDE + +C Q C + KC+ + CD DC
Sbjct: 1087 KERRCDGRKDC-QDQSDEQHCEKFDKTKKCHAHQHACD-NGKCVDASLRCDGMNDCG--- 1141
Query: 276 IVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D++DE D C G +C+ S C+P W CD ++DCS D +DE DK
Sbjct: 1142 --DDSDEMHCGDSAVGCEEGMFRCS-SGSCLPAGWECDGKIDCS-----DGSDEH-DKCG 1192
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---SHK 390
+ C P RC QC+ C+G DC +G DE C+++A NL C +
Sbjct: 1193 RRS---CPPEMHRC-LLGQCLDKKLICNGHNDCGDGSDE-LNCSDEAK-SNLSCPAEKFQ 1246
Query: 391 CSPTPRGAMCFCPAGQNPNKTQCVDADEC 419
C+ PR +C P +T+C EC
Sbjct: 1247 CTSNPR--ICL------PGRTRCNGTAEC 1267
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD--ILYWCDSHLNTVESVRVDGSH----- 160
+ +A M G P+V+ NI WP+ + +D +Q +YW D+ L +V++VR+DGS
Sbjct: 546 IARASMDGTRSRPIVSDNIHWPNGIALDMHQQQGRIYWVDAKLGSVQTVRIDGSGRRTIL 605
Query: 161 NAVLCHPNEL 170
+ VL HP L
Sbjct: 606 DGVLKHPYGL 615
>gi|355567799|gb|EHH24140.1| Very low-density lipoprotein receptor, partial [Macaca mulatta]
gi|355753382|gb|EHH57428.1| Very low-density lipoprotein receptor, partial [Macaca
fascicularis]
Length = 840
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/356 (33%), Positives = 166/356 (46%), Gaps = 59/356 (16%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ C + S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 86 CRINEISCAAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPSEFTCSSGRCISRNFV 145
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 146 CNGQDDC-SDGSDELDCAPPTCGVHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 198
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------- 316
++ +C ++QC S +CI W CD + DC
Sbjct: 199 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCKDGTSRTCRPDQFECEDGSC 257
Query: 317 --------STDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCS 367
D VD +DE N C P + +C S +C+ +SK C+ + DC
Sbjct: 258 IHGSRQCNGIRDCVDGSDE----VNCKNVNQCLGPGKFKC-RSGECIDISKVCNQEQDCR 312
Query: 368 NGEDEGPFCN---NKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDG 423
+ DE P N+ N CSH C G C C AG + ++ C D DEC G
Sbjct: 313 DWSDE-PLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPG 371
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I L
Sbjct: 372 ICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKIGL 423
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 155/372 (41%), Gaps = 91/372 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C ++ +C+ L CDG DC +G DE C F C G+C+P WKC
Sbjct: 6 CEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCVPNRWKC 64
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE P C + C ++ CA S +CIP +W CD E DC +
Sbjct: 65 DGDPDC-EDGSDESPEQCHMRTCRINEISCAAHSTQCIPVSWRCDGENDCDSGEDEENCG 123
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC+ S CIP +
Sbjct: 124 NITCSPSEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGVHEFQCSTS-SCIPIS 182
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D +DE ++ + C +E++CGS +C+ CDG PD
Sbjct: 183 WVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCGSG-ECIHKKWRCDGDPD 236
Query: 366 CSNGEDEGPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAGQNPN 409
C +G C ++ +CE+ C H +C+ C P
Sbjct: 237 CKDGTSR--TCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCR 294
Query: 410 KTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYT 445
+C+D +ECL+ +G C C + + Y C C G+
Sbjct: 295 SGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFE 354
Query: 446 LRPDGKSCTAVN 457
L D K+C ++
Sbjct: 355 L-IDRKTCGDID 365
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 91/173 (52%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C P QF C G+CI WKCDG DC+ DGSDE N C C + +C+P+
Sbjct: 4 AKCEPSQFQCTNGRCITLLWKCDGDEDCV-DGSDEKNCVKKTCAESDFVCN-NGQCVPNR 61
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL-SKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE ++ H C ++ CA S +CIP +W CD E DC +
Sbjct: 62 WKCDGDPDCE-----DGSDESPEQCHMRTCRINEISCAAHSTQCIPVSWRCDGENDCDSG 116
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N + C P+E C SS +C++ + C+G+ DCS+G DE
Sbjct: 117 EDEENC----------GNITCSPSEFTC-SSGRCISRNFVCNGQDDCSDGSDE 158
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 464 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 522
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 523 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 582
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 583 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 610
>gi|387604226|gb|AFJ93121.1| low density lipoprotein receptor-related protein 8 transcript
variant 2 [Anas platyrhynchos]
Length = 876
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/322 (34%), Positives = 151/322 (46%), Gaps = 25/322 (7%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C ++ CG SSN+C+ S CDG+ DC +G DE C C+P +F C CI +
Sbjct: 108 VCPAEKISCGDSSNKCIPSSWRCDGQKDCESGIDEAG-CTPACSPNEFQCSNKTCISIIF 166
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT 280
CDG DC DGSDE C + QC S CIP W+CD + DC +D+ V+
Sbjct: 167 VCDGDNDC-GDGSDERKCSPLTCNPNEFQCNNSM-CIPELWVCDNQPDCDDQSDESVEKC 224
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D + C + QC + +CI NW CD + DC D +DE V C
Sbjct: 225 GYDAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDCK-----DKSDEQ-----DCPLVTC 273
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGA 398
P+E +CG C+ +K CD DC + DE +C N CSH C G
Sbjct: 274 RPDEFQCGDGT-CIHGAKQCDKVHDCPDNSDEAGCVQGINECSMNNGGCSHICKDLKIGY 332
Query: 399 MCFCPAGQNP-NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G +K C D DEC +C Q C N Y C C EGY + K+C AV
Sbjct: 333 ECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVG 392
Query: 458 VPQDEPASIIFSSTVDIRRIHL 479
+ +IF++ ++R+I L
Sbjct: 393 ----KSPYLIFTNRHEVRKIDL 410
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 77/170 (45%), Gaps = 18/170 (10%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C + IP WKCD DC D SDE + C C + CIP W
Sbjct: 28 ECEEDQFQCRNERSIPAIWKCDEDDDC-SDNSDEADCPKKTCAESDFTCD-NGHCIPARW 85
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KCIP +W CD + DC +
Sbjct: 86 KCDGEEECP--DGSDESEAACTK-QVCPAEKISCGDSSNKCIPSSWRCDGQKDCES---- 138
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + C PNE +C S+ C+++ CDG DC +G DE
Sbjct: 139 -GIDE------AGCTPACSPNEFQC-SNKTCISIIFVCDGDNDCGDGSDE 180
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L N DL P +D
Sbjct: 469 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNR-DLSEPRAIAVDPTRRFM 527
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV NI+WP+ + +D LYW DS L+++ + +
Sbjct: 528 YWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 587
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 588 GSNRKVL 594
>gi|321465341|gb|EFX76343.1| hypothetical protein DAPPUDRAFT_306243 [Daphnia pulex]
Length = 883
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 152/494 (30%), Positives = 210/494 (42%), Gaps = 80/494 (16%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C + Q +CA S +CIP +W CD E DC D++DE+ + H EF
Sbjct: 28 CASHQFECA-SGRCIPFSWSCDGENDCD-----DSSDEN-----EHCRGSVHCADTEFQC 76
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
+ C +R +C ND + DE K + K
Sbjct: 77 SSGPRCI-------PLRWQCDGENDCEDR----------SDEDPTKCEIKKCTEEQFACK 119
Query: 125 NIQW---PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVAL 181
N P S + D N D S D V C +E C ++ +C+
Sbjct: 120 NRAGECIPLSWICDKNADC------------SDGTDEEGCNVNCTADEFTC-ANGRCIQK 166
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTP--GQFSCGMGKCIPESWKCDGFVDCLEDGSDE-- 237
FCDG+ DC + DEG C + P F+CG CIP KCDGFVDC +GSDE
Sbjct: 167 RWFCDGQDDCGDNSDEGDHCPEDSCPPDNNFNCGDNVCIPNKRKCDGFVDC-SNGSDEAD 225
Query: 238 -PNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
P++ ++ QC + QC CI +W CD + DC D +DE C
Sbjct: 226 CPSSALNGTNQCNAQEFQCLNGIDCIHSSWQCDGDSDCP-----DGSDERNCSPSTCRPD 280
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHP-NELRCGS 349
Q +C +CIP + C +C+ D +DE S N + C+P +E CG
Sbjct: 281 QFRCD-DGECIPGHLQCSGAAECN-----DTSDET-----SCNGTISTGCNPESEFDCGG 329
Query: 350 SNQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
C+ L K CDG DC +DE G N+ N C H C+ T G C C G
Sbjct: 330 G-MCIGLDKVCDGVDDCGQWQDEPKGKCSVNECSVNNGGCMHTCTDTTWGFRCGCHPGYT 388
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ + CVD DECL G+C QTC N S+ C C GYT P ++ N + +++
Sbjct: 389 LSDNSTCVDVDECLEPGTCSQTCINEKGSFKCECLTGYTRDPHDRTHCKAN---EGHSAL 445
Query: 467 IFSSTVDIRRIHLN 480
+F+ DIRR L+
Sbjct: 446 LFTHGTDIRRFSLD 459
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMG-KCIPE 220
+C ++ C +S +C+ S CDG+ DC + DE C C +F C G +CIP
Sbjct: 27 VCASHQFEC-ASGRCIPFSWSCDGENDCDDSSDENEHCRGSVHCADTEFQCSSGPRCIPL 85
Query: 221 SWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVD 278
W+CDG DC + ++P C I +C Q C + +CIP +W+CD+ DCS D
Sbjct: 86 RWQCDGENDCEDRSDEDPTKCEIKKCTEEQFACKNRAGECIPLSWICDKNADCS-----D 140
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
TDE+ + C + CA + +CI W CD + DC DN+DE + ++
Sbjct: 141 GTDEEGCNVN-CTADEFTCA-NGRCIQKRWFCDGQDDCG-----DNSDE--GDHCPEDS- 190
Query: 339 LCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P N CG N C+ + CDG DCSNG DE
Sbjct: 191 -CPPDNNFNCG-DNVCIPNKRKCDGFVDCSNGSDEA 224
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++G+ G +R L+ +I+WP+ + +D L+W D+ ++ + S DGS+ V+
Sbjct: 586 RIERSGLDGSHRQVLIDSHIKWPNGITLDRVDRRLFWVDAKMDMIGSCNYDGSNRRVV 643
>gi|409426|gb|AAA53684.1| very low density lipoprotein receptor [Homo sapiens]
Length = 873
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 167/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ Y + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRAYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|296232913|ref|XP_002761791.1| PREDICTED: low-density lipoprotein receptor isoform 1 [Callithrix
jacchus]
Length = 860
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 157/332 (47%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD +PDC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISKQFLCDSEPDCLDGSDEDSCPMVTCGPASFRCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q NG + QC S +CI W CD + DC
Sbjct: 168 DNDPDC-EDGSDEWPERCGGLDVSQQNNGPCSAFEFQCR-SGECIHSGWHCDGDPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DED C + QC+ CI + CD+E DC D +DE
Sbjct: 224 ---DKSDEDNCTVATCRPDEFQCS-DGNCIHGSRQCDQENDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+AL+K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECIALNKVCNSARDCRDWSDEPLKECGTNECLDNNGGCSHIC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 330 NDLKIGHECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A +IF++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLIFTNRHEVRKMTLDRS 417
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG+P+C +G DE + C FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGRPECQDGSDESQETCLSVSCRSEDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE C + +C KCI +LCD E DC +D +
Sbjct: 86 LWRCDGQVDC-ENGSDEQGCVPKTCSQDEFRCH-DGKCISKQFLCDSEPDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DED C +C S CIP W CD + DC D +DE W +
Sbjct: 139 DEDSCPMVTCGPASFRCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPERCGGLDVSQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C E +C S +C+ CDG PDC + DE
Sbjct: 192 QNNGPCSAFEFQC-RSGECIHSGWHCDGDPDCKDKSDE 228
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGRPEC-QDGSDESQETCLSVSCRSEDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI +LCD E DC
Sbjct: 85 QLWRCDGQVDCE-----NGSDEQGCVPKTCSQDEFRCH-DGKCISKQFLCDSEPDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DED S V C P RC SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDED-----SCPMVTCGPASFRCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ +++K G++G + LVT NIQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 538 ISAKIKKGGLNGVDVYSLVTDNIQWPNGITLDLPRGRLYWADSKLHSISSIDVNGGNRKT 597
Query: 164 -------LCHPNEL 170
L HP L
Sbjct: 598 ILEDEDRLAHPFSL 611
>gi|363736013|ref|XP_422146.3| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Gallus gallus]
Length = 4575
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 107/201 (53%), Gaps = 8/201 (3%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
++ H C G+ C C+ +WLCD E DC D++DE D C N
Sbjct: 4 EEHHLCDVGEFLCHDRMTCVSQHWLCDGEPDCP-----DDSDESVDTCPEEQDFKCPLNY 58
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCP 403
+ C +N+C+ LS+ C+G DCS+G DEG C C+ + C +KC+ T G+ C+C
Sbjct: 59 MTCIGTNKCIHLSQLCNGVYDCSDGYDEGVHCRELLPRCQQMNCQYKCAITRNGSKCYCG 118
Query: 404 AGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G + C D +EC GSC Q C NT SY CSC EGY L+PD KSC A N P D
Sbjct: 119 DGYETSNDGRSCTDLNECNTYGSCSQMCVNTDGSYTCSCVEGYVLQPDNKSCKAKNEPAD 178
Query: 462 EPASIIFSSTVDIRRIHLNGS 482
P ++ +++ I +HLNGS
Sbjct: 179 RPPFLLIANSETIEVLHLNGS 199
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 169/403 (41%), Gaps = 99/403 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C N+ +C +N+C+ CDG DC N EDE C A C QFSCG G+CIP SW
Sbjct: 863 CPENQFKC-QNNRCIPKRWLCDGANDCGNNEDESNKTCAARTCQFDQFSCGNGRCIPTSW 921
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T CIH
Sbjct: 922 LCDREDDCGDQTDEMTSCEFPTCEPLTQFICKNGRCISSKWLCDSDDDCGDGSDELGCIH 981
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCALS 300
C Q +C + +CIP +W CD + DC +D+ N T E+ +C + QC+
Sbjct: 982 SCSADQFRC-YNGRCIPSHWACDGDNDCGDYSDETRTNCTKEETPAPGRCNGKEFQCSPD 1040
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1041 GNCVPELWRCDGEKDCEDGSDEKGCNGTLRLCDEKTKFSCVSTGRCISKAWLCDGDIDCE 1100
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED + +C P + C + ++ C+ K C+G+ DC +G DEG C+ +
Sbjct: 1101 DQSDED-----NCEGYMCGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDEGDLCD-ECS 1154
Query: 382 CENLKCSHKCSPTPRGAM-CFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CSH+CS P G + C CP+G N NKT C D C C Q C +
Sbjct: 1155 LNNGGCSHQCSVVPGGRIVCSCPSGFNLSVDNKT-CEIMDYCTKHLKCSQVCEQHKNNVK 1213
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
CSC EG+ L DG++C + + + A IIFS +IR+I L+
Sbjct: 1214 CSCYEGWKLSKDGENCISTDPFE---AFIIFSIRHEIRKIDLH 1253
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 161/370 (43%), Gaps = 60/370 (16%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2654 QNKPTCEENYFGC-PSGRCILNTWLCDGQKDCEDGVDE-LHCDSSCSWNQFACSADKCIS 2711
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC +G DE + C G C S C+PH+WLCD E DC
Sbjct: 2712 KQWTCDGEDDC-GNGLDESDAICGSVTCAVGTFSCLGSHACVPHHWLCDGERDCPNGSDE 2770
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F +C G+ CA
Sbjct: 2771 LSTAGCAPNNTCDENAFMCRNNICIPKQFVCDHDDDCGDGSDESLECGYRRCHPGEFTCA 2830
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ + W CD + DC D++DE +K + C+ + C + +C+ +
Sbjct: 2831 DGRCLLNSQWQCDGDFDCP-----DHSDEAPINKKCKSSEQSCNSSFFMC-KNGKCIPQN 2884
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
C+ K DCS+G DE N+ + + CS C P G C C G ++ KT C
Sbjct: 2885 NVCNNKEDCSDGSDEKSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLKDDGKT-C 2943
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTV 472
D DEC C Q C NT+ +Y C C +GY ++PD C +++ DE +I +
Sbjct: 2944 TDIDECSSGFPCSQQCINTYGTYKCLCADGYEIQPDNLNGCKSLS---DEEPFLILADHH 3000
Query: 473 DIRRIHLNGS 482
+IR+I +GS
Sbjct: 3001 EIRKISTDGS 3010
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 146/360 (40%), Gaps = 76/360 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC G+DE
Sbjct: 3509 FWCDGDYDCADGS--DERYCETGCSRDQFQC-SNGQCISAKWRCDGHEDCKLGDDEKNCE 3565
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3566 PASPTCSVSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAYCI 3623
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3624 PVRWLCDGIHDC-----VDGSDEE-----DCVQGGSICRADEFLCNNSLCKLHFWVCDGE 3673
Query: 314 MDCS--------------------------------------TDDIVDNTDEDWDKYFSH 335
DC DD DN+DED ++
Sbjct: 3674 DDCGDNSDEVAEMCVKFPCPPTRPYRCRNNRVCLRPEQICNEVDDCGDNSDEDHCDKITY 3733
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP-- 393
A C +E C + +C+ + CD DC +G DE + K C +P
Sbjct: 3734 KARPCKKDEFTC-NDKKCIPMELQCDWFDDCGDGSDEQ---DCKISVTEYTCEDNVNPCG 3789
Query: 394 -------TPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
T +C C G +N QC D +EC++ G+C Q C N SY C+C + Y
Sbjct: 3790 DDAYCNQTKTSLLCQCKPGFQRNEMNRQCEDINECMVFGACSQHCNNVKGSYRCACEKNY 3849
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3294 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPEECPEFRCQPGRFQCGTGLCALPAFI 3352
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3353 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG-----DEEDER 3406
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3407 DCPENSCSPDHFQCQTTKHCISKLWVCDEDPDCADGSDEANCDKK----------TCGPH 3456
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DC + DE
Sbjct: 3457 EFQC-KNNNCIPDHWRCDSQNDCGDNSDE 3484
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 107/243 (44%), Gaps = 33/243 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3413 CSPDHFQCQTTKHCISKLWVCDEDPDCADGSDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3472
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE +
Sbjct: 3473 DSQNDC-GDNSDEENCKPQTCTLKDFLCA-NGDCVSARFWCDGDYDCA-----DGSDERY 3525
Query: 285 -------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D+F QC NGQ CI W CD DC D N + +
Sbjct: 3526 CETGCSRDQF-QCSNGQ--------CISAKWRCDGHEDCKLGDDEKNCEP--------AS 3568
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C +E C S C++ S C+G+ DC++G DE C + + +C +K P
Sbjct: 3569 PTCSVSEYICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAYCIPVR 3626
Query: 398 AMC 400
+C
Sbjct: 3627 WLC 3629
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3334 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPINLR 3392
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3393 CNGQDDC-GDEEDERDCPENSCSPDHFQCQTTKHCISKLWVCDEDPDCA-----DGSDEA 3446
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DC DN+DE+ + C
Sbjct: 3447 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCG-----DNSDEE-----NCKPQTCTLK 3495
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ C + + CV+ +CDG DC++G DE +C + +CS+
Sbjct: 3496 DFLCANGD-CVSARFWCDGDYDCADGSDE-RYCETGCSRDQFQCSN 3539
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3372 VCLSGQFKCTKNQKCIPINLRCNGQDDCGDEEDERDCPENSCSPDHFQCQTTKHCISKLW 3431
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC DGSDE N C + QC + CIP +W CD + DC DN+DE
Sbjct: 3432 VCDEDPDC-ADGSDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCG-----DNSDE 3484
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3485 ENCKPQTCTLKDFLCA-NGDCVSARFWCDGDYDCA-----DGSDE------RYCETGCSR 3532
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC G+DE
Sbjct: 3533 DQFQC-SNGQCISAKWRCDGHEDCKLGDDE 3561
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 118/271 (43%), Gaps = 59/271 (21%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C++ +K CDG+ DC + DE ++ CT +F C G CI +S +C+ +DC D
Sbjct: 2537 SNRRCISRNKVCDGRNDCGDNSDEIDCKDSACTSTEFRCADGTCIGKSAQCNQIIDC-AD 2595
Query: 234 GSDEPNTCIHQCF---------NGQVQCALSKKCIPHNWLCDEEMDCS--TDDI---VDN 279
SDE N C G + C + CI W+CD DC TD++ V N
Sbjct: 2596 ASDEKNCNNTNCAYFYKLGIKSTGFISCNSTSLCILPEWICDGSNDCGDYTDELKCPVQN 2655
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ + C +G +CI + WLCD + DC D DE H
Sbjct: 2656 KPTCEENYFGCPSG--------RCILNTWLCDGQKDCE-----DGVDE------LHCDSS 2696
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHK 390
C N+ C S+++C++ CDG+ DC NG DE + A C ++ C SH
Sbjct: 2697 CSWNQFAC-SADKCISKQWTCDGEDDCGNGLDE-----SDAICGSVTCAVGTFSCLGSHA 2750
Query: 391 CSPT----------PRGAMCFCPAGQNPNKT 411
C P P G+ AG PN T
Sbjct: 2751 CVPHHWLCDGERDCPNGSDELSTAGCAPNNT 2781
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 123/338 (36%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 860 NHSCPENQFKCQNNRCIPKRWLCDGANDCGNNEDESNKTCAARTCQFDQFSCG-NGRCIP 918
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
+WLCD E DC TD++ T E +F
Sbjct: 919 TSWLCDREDDCGDQTDEMTSCEFPTCEPLTQFICKNGRCISSKWLCDSDDDCGDGSDELG 978
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C Q +C + +CIP +W CD + DC D D T + K + C+ E
Sbjct: 979 CIHSCSADQFRC-YNGRCIPSHWACDGDNDCG--DYSDETRTNCTKEETPAPGRCNGKEF 1035
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------------------FCNN 378
+C CV CDG+ DC +G DE C+
Sbjct: 1036 QCSPDGNCVPELWRCDGEKDCEDGSDEKGCNGTLRLCDEKTKFSCVSTGRCISKAWLCDG 1095
Query: 379 KADCENLK-----CSHKCSPTPR-----GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DCE+ + C P ++C P + C D DEC L
Sbjct: 1096 DIDCEDQSDEDNCEGYMCGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDEGDLCDECSL 1155
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC G+ L D K+C ++
Sbjct: 1156 NNGGCSHQCSVVPGGRIVCSCPSGFNLSVDNKTCEIMD 1193
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 127/334 (38%), Gaps = 87/334 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G +++ ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3132 IGRVGMDGSSQTVVIETQISRPMALTIDYVNHRLYWADE--NHIEFSDMDGSHRHKV--P 3187
Query: 168 NELRCGSSNQCVALSKF------CDGKPDCSN------GEDEGPFCNAECTPGQFSCGMG 215
N+ G +AL+ F DGK N G D N+ T
Sbjct: 3188 NQDIPG----VIALTLFEDYIYWTDGKTKSLNRAHKTSGLDRLSLINSWHTITDIQVYHS 3243
Query: 216 KCIPESWKCDGFVD--------CLEDG-------------SDEPNTCIHQCFNGQVQCAL 254
P+ K V+ L G + + TC+ C Q +C
Sbjct: 3244 YRQPDVSKHLCTVNNGGCSHLCLLAPGKMHTCACPTNFYLAADNKTCLSNCTASQFRCK- 3302
Query: 255 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 279
+ KCIP W CD DC +D DN
Sbjct: 3303 TDKCIPFWWKCDTVDDCGDGSDEPEECPEFRCQPGRFQCGTGLCALPAFICDGENDCGDN 3362
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H C +GQ +C ++KCIP N C+ + DC DE+ ++ N+
Sbjct: 3363 SDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG--------DEEDERDCPENS-- 3412
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P+ +C ++ C++ CD PDC++G DE
Sbjct: 3413 CSPDHFQCQTTKHCISKLWVCDEDPDCADGSDEA 3446
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G +R VT + WP+ L +DY+ ++LY
Sbjct: 628 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGYSRQIFVTSKMLWPNGLTLDYHANVLY 687
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E + ++G+ V+ +L
Sbjct: 688 WCDAYYDHIERIFLNGTERKVIYSGKDL 715
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 152/395 (38%), Gaps = 66/395 (16%)
Query: 56 HTLALE-------FNHRNQSLCFIQQQNVSSVRLRCAQINDLLN----SWDLPAPEIFPL 104
H LAL+ + + N+ L I + +S + D+L + D A +++
Sbjct: 2298 HVLALDECQNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAEKLYFS 2357
Query: 105 DE---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV---------- 151
D ++E+ G R +V SL + D ++W D +
Sbjct: 2358 DGSLGKIERCEYDGSQRYVIVKSGPGTFLSLAV--YDDYIFWSDGVRRAILRSSKYTGGD 2415
Query: 152 -ESVRVDGSHN--AVLCHPNELRCGSSNQCVALSKFC--------DGKPDCSNGEDEGPF 200
+ +R D H ++ N+ + C ++ C DG+ +CS D
Sbjct: 2416 TKVLRSDIPHQPMGIIAVANDTNSCELSPCAQMNGGCHDLCLLTPDGRVNCSCRGDRILI 2475
Query: 201 CNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQ 251
+ C +F CG G+CI CDG C + ++ C ++ C G
Sbjct: 2476 DDNRCVTKNSTCNIYSEFECGNGECIDYQLTCDGTAHCKDKSDEKLFYCENRGCRKGFKP 2535
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C+ +++CI N +CD DC DN+DE K C + + +CA CI + C+
Sbjct: 2536 CS-NRRCISRNKVCDGRNDCG-----DNSDEIDCKDSACTSTEFRCA-DGTCIGKSAQCN 2588
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ +DC+ N + YF + + + C S++ C+ CDG DC + D
Sbjct: 2589 QIIDCADASDEKNCNNTNCAYF-YKLGIKSTGFISCNSTSLCILPEWICDGSNDCGDYTD 2647
Query: 372 EGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
E LKC + PT CP+G+
Sbjct: 2648 E------------LKCPVQNKPTCEENYFGCPSGR 2670
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E++ M G R LV KN+Q P+ LV+D L+W D L+ + SV DGS + V
Sbjct: 4028 IEESSMDGTLRRILVQKNLQRPTGLVVDQFSQRLFWADFELSVIGSVLFDGSDSVVSVST 4087
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 4088 KQGLLHPHRI 4097
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ N
Sbjct: 1998 IGKAYLDGSEKVVLVSLGIVWPNGISIDYEENKLYWCDARTDKIERIDLESGGN 2051
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 67/186 (36%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQI---NDLLNSW-------------- 94
+ G+ L L++++R ++C+I+ ++++S +L+C +I L + W
Sbjct: 207 VKGSSVLTLDYSYREDTICWIESRDLAS-QLKCTKITKAGKLTDEWIINVVQYLHNVQQI 265
Query: 95 -----------------------------------DLPAPEIFPLD-------------- 105
DL P+ +D
Sbjct: 266 AIDWITGNFYFLDHVSDRIFVCNQNGTVCITLIELDLSNPKAIAVDPTSGKLFFTDYGNV 325
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E+ M G NR+ +V I+ P++L +D +YW D +L+ VE V +G +
Sbjct: 326 AKVERCDMDGMNRTWIVDSKIEQPTALALDLINKYVYWVDIYLDNVEVVDYEGRKRHTVI 385
Query: 166 HPNELR 171
++R
Sbjct: 386 KGRQVR 391
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 12/104 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE----CTPGQFSC-GMGKC 217
LC E C CV+ CDG+PDC + DE C E C +C G KC
Sbjct: 8 LCDVGEFLCHDRMTCVSQHWLCDGEPDCPDDSDESVDTCPEEQDFKCPLNYMTCIGTNKC 67
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
I S C+G DC DG DE C Q N Q +CA+++
Sbjct: 68 IHLSQLCNGVYDC-SDGYDEGVHCRELLPRCQQMNCQYKCAITR 110
>gi|348550969|ref|XP_003461303.1| PREDICTED: low-density lipoprotein receptor-like [Cavia porcellus]
Length = 837
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 157/329 (47%), Gaps = 40/329 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RCG +C++ CDG+PDC +G DE C+ C+P F C CIPE W C
Sbjct: 90 CAVDEFRCGD-GRCISRQFVCDGEPDCEDGSDEA-TCSVTCSPNSFQCNSSACIPELWAC 147
Query: 225 DGFVDCLEDGSDE-PNTCIHQ-----------CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC +DGSDE P C + C + + C S +CI +W CD + DC
Sbjct: 148 DGEPDC-KDGSDEWPQHCGDRTTSAPLGPSGPCSSLEFHCG-SGECIHSSWRCDRDPDCK 205
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC + C+ + C+ E DC D +DE
Sbjct: 206 -----DQSDEEGCAVATCRPDEFQC-MDGTCVHGSRQCNREYDCQ-----DMSDE----V 250
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
N LC P++ +C + +C+ L + CDG DC + DE +C N CSH
Sbjct: 251 GCVNVTLCEGPDKFKC-HTGECITLDRVCDGARDCRDWSDEPLKECGTNECLDNNGGCSH 309
Query: 390 KCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP+G + + QC D DEC +C Q C N SY C C +G+ +
Sbjct: 310 VCNDLKIGYQCLCPSGFHLVGQWQCEDIDECQQPDTCSQLCVNLEGSYKCECEDGFHMDA 369
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
K+C AV A ++F++ ++RR+
Sbjct: 370 STKTCKAVG----SVAYLLFTNRHEVRRM 394
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 102/220 (46%), Gaps = 29/220 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ + CDG +C +G DE A C G FSCG + +CIP
Sbjct: 8 CAKNEFQC-RDGKCISYTWVCDGGAECQDGSDESQETCMAATCKAGDFSCGGRLSRCIPS 66
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC G+DE C + +C +CI ++CD E DC D +
Sbjct: 67 SWRCDGQEDC-HSGADERGCPPKTCAVDEFRCG-DGRCISRQFVCDGEPDCE-----DGS 119
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY---FSHNA 337
DE C QC S CIP W CD E DC D +DE W ++ + +A
Sbjct: 120 DEATCSV-TCSPNSFQCN-SSACIPELWACDGEPDCK-----DGSDE-WPQHCGDRTTSA 171
Query: 338 VL-----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
L C E CG S +C+ S CD PDC + DE
Sbjct: 172 PLGPSGPCSSLEFHCG-SGECIHSSWRCDRDPDCKDQSDE 210
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 92/194 (47%), Gaps = 23/194 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCALS-KKCI 259
A+C +F C GKCI +W CDG +C +DGSDE TC+ C G C +CI
Sbjct: 6 AKCAKNEFQCRDGKCISYTWVCDGGAEC-QDGSDESQETCMAATCKAGDFSCGGRLSRCI 64
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P +W CD + DC + DE C + +C +CI ++CD E DC
Sbjct: 65 PSSWRCDGQEDCHS-----GADERGCPPKTCAVDEFRCG-DGRCISRQFVCDGEPDCE-- 116
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNN 378
D +DE + +V C PN +C SS C+ CDG+PDC +G DE P C +
Sbjct: 117 ---DGSDE------ATCSVTCSPNSFQCNSS-ACIPELWACDGEPDCKDGSDEWPQHCGD 166
Query: 379 KADCENLKCSHKCS 392
+ L S CS
Sbjct: 167 RTTSAPLGPSGPCS 180
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + W
Sbjct: 458 DGLAVDWIHGNIYWTDSVPGTVSVADTRGVKRRTLFQKKGSKPRAIVVDPVHGFMYWTDW 517
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA R+EK G++G + LVT+NI+WP+ + +D + LYW DS L+++ S+
Sbjct: 518 GTPA--------RIEKGGLNGVDIYSLVTENIEWPNGITLDLSSSRLYWVDSKLHSISSI 569
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G L HP L
Sbjct: 570 DVNGRDRKTILEDEKRLAHPFSL 592
>gi|307206924|gb|EFN84770.1| Putative vitellogenin receptor [Harpegnathos saltator]
Length = 2292
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 127/388 (32%), Positives = 174/388 (44%), Gaps = 69/388 (17%)
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
WC+S + + R D E RC N C++ S C+G+ DC + DE
Sbjct: 937 WCNSRYDCAD--RSDEDEEKCKAASYEFRCHEGN-CISSSLVCNGQFDCFDTSDELNCET 993
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIP 260
+C+ +F+C M KCIP+ WKCDG DC DGSDE C +GQ +CA + +CI
Sbjct: 994 HKCSSNEFTCDMRKCIPKIWKCDGQTDC-PDGSDEAVKICKTSVCNDGQFRCA-NGRCIS 1051
Query: 261 HNWLCDEEMDCS---------------TDDIVD------NTD------------------ 281
+ CD DC T + D NTD
Sbjct: 1052 SSMKCDGFNDCGDESDEQHCLSGKHGHTGNCTDGEYPCYNTDICLPKKVRCNGVQDCPKN 1111
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------DWDKYFSH 335
+D CF Q C + KCIP W+CD+ TDD D +DE +W K +
Sbjct: 1112 DDEHDCAYCFEDQFTCD-NLKCIPQTWVCDK-----TDDCGDKSDEKGCGRSNWKKTVVN 1165
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
++ +C E C SS C+ SK CDG DC +G DE C +N +C C TP
Sbjct: 1166 SSDICE--EFMC-SSGTCLPFSKVCDGVQDCPDGSDEQEKCATSC-MQNNRCHGLCHKTP 1221
Query: 396 RGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
RG +C C G + C + +EC D C Q C N+ S+VCSC +GY +R D SC
Sbjct: 1222 RGGVCGCVKGYRLAADMVSCDEINECEHD-VCSQLCHNSAGSFVCSCFDGYIIRDDKISC 1280
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
A+ P + +I ++ DIR+I N
Sbjct: 1281 KAIGPPME----LIAATDRDIRKISSNA 1304
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/283 (37%), Positives = 140/283 (49%), Gaps = 31/283 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSK------KCIPHN 262
F C KCIP +++CD + DC D SDE N +QCA + KCIP
Sbjct: 15 FRCENSKCIPFTFECDEYDDC-GDNSDERNCEDFKLIVPASIQCARDEFRCEDAKCIPKG 73
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
CD DC+ D +DE K +C G+ +C+ CI +W+CD MDC
Sbjct: 74 KFCDAVPDCA-----DKSDEYIGCVKKLKC-RGKFRCS-DGHCIARDWVCDGAMDCP--- 123
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNK 379
D +DE NA C R NQ C++LS C+GK +C +G DEG C N
Sbjct: 124 --DGSDEQNCGNKILNASDCTNKNDRYLCKNQRCISLSTVCNGKDNCGDGSDEGVGCKNS 181
Query: 380 A-DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
C ++ CS C TP G +C C AG N+T C+D DEC I G+CDQ C NT SY
Sbjct: 182 TMSCASMGCSDMCRMTPNGPVCTCRAGYILQDNRT-CIDIDECAIYGTCDQRCINTKGSY 240
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY L D ++C A A++I+S+T IR ++L
Sbjct: 241 KCICQTGYMLLDDMRTCRA----DGGEATMIYSTTTKIRGVYL 279
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 144/387 (37%), Gaps = 109/387 (28%)
Query: 164 LCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNAE---------CTPGQ---- 209
+C E++CG SN C+ ++C+G +C +GEDE C C GQ
Sbjct: 875 ICPAGEIKCGGSNDVCIKRQQWCNGIKECPDGEDEPNGCKESGHCGKDKFMCKNGQCINR 934
Query: 210 ---------------------------FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
F C G CI S C+G DC D SDE N
Sbjct: 935 EDWCNSRYDCADRSDEDEEKCKAASYEFRCHEGNCISSSLVCNGQFDCF-DTSDELNCET 993
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALS 300
H+C + + C + +KCIP W CD + DC D +DE K C +GQ +CA +
Sbjct: 994 HKCSSNEFTCDM-RKCIPKIWKCDGQTDCP-----DGSDEAVKICKTSVCNDGQFRCA-N 1046
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDW--------------DKYFSHNAVLCHPNELR 346
+CI + CD DC D +DE +Y +N +C P ++R
Sbjct: 1047 GRCISSSMKCDGFNDCG-----DESDEQHCLSGKHGHTGNCTDGEYPCYNTDICLPKKVR 1101
Query: 347 CGSSN------------------------QCVALSKFCDGKPDCSNGEDE---------G 373
C +C+ + CD DC + DE
Sbjct: 1102 CNGVQDCPKNDDEHDCAYCFEDQFTCDNLKCIPQTWVCDKTDDCGDKSDEKGCGRSNWKK 1161
Query: 374 PFCNNKADCENLKCSH-KCSPTPR--GAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
N+ CE CS C P + + CP G + + +C A C+ + C C
Sbjct: 1162 TVVNSSDICEEFMCSSGTCLPFSKVCDGVQDCPDGSD-EQEKC--ATSCMQNNRCHGLCH 1218
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
T VC C +GY L D SC +N
Sbjct: 1219 KTPRGGVCGCVKGYRLAADMVSCDEIN 1245
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ AGM G+N VTKNI+WP S+ IDY + LYW D+ L VES+R+DGS + H
Sbjct: 403 IAMAGMDGKNSHLFVTKNIKWPISVTIDYPNNRLYWVDAKLAVVESIRLDGSDRRTVLH 461
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPE 220
++ C +E RC + +C+ KFCD PDC++ DE C + G+F C G CI
Sbjct: 54 SIQCARDEFRCEDA-KCIPKGKFCDAVPDCADKSDEYIGCVKKLKCRGKFRCSDGHCIAR 112
Query: 221 SWKCDGFVDCLEDGSDEPN 239
W CDG +DC DGSDE N
Sbjct: 113 DWVCDGAMDC-PDGSDEQN 130
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++ P EI+ D M G N + ++N+ S + ID + LYW DS T+ES
Sbjct: 1426 YNNPFSEIYQTD-------MMGSNMKIIASRNVGVVSGMAIDRMKSKLYWTDSFYRTIES 1478
Query: 154 VRVDGSHNAVLCHPNELRCGSSN 176
+DG+ + + R S N
Sbjct: 1479 SNLDGTGRSTFLKTDIYRPLSIN 1501
>gi|1730113|sp|P98166.1|VLDLR_RAT RecName: Full=Very low-density lipoprotein receptor; Short=VLDL
receptor; Short=VLDL-R; Flags: Precursor
gi|532226|gb|AAA42341.1| very low density lipoprotein receptor [Rattus norvegicus]
Length = 873
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 166/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCRTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 ITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 156/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCRTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|363736236|ref|XP_422014.3| PREDICTED: low-density lipoprotein receptor-related protein 2
[Gallus gallus]
Length = 4661
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 161/328 (49%), Gaps = 38/328 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C S+ QC+ + CD DC++G DE C Q SC G C S +C
Sbjct: 113 CSSQQFTC-SNGQCIPSAYRCDRVKDCTDGTDERDCRYPRCE--QLSCANGACFNASQRC 169
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VDC D SDE N C C + Q QCA + +CIP ++CD + DC D +DE+
Sbjct: 170 DGKVDC-RDTSDEAN-CTRGCASTQFQCA-NGECIPQAFMCDHDDDCG-----DRSDENS 221
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C C S +CI +W+CD + DC ++ + + + C+P E
Sbjct: 222 CTYATCRGNFFTCP-SGRCIHQSWICDGDDDCEDNEDERGCESSYHE--------CYPGE 272
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S C+ + K CDG DC GEDE G C N + C L C ++C +P G M
Sbjct: 273 WACPESGHCIPIGKVCDGAADCPAGEDETNITAGRHC-NISHCAALSCQYRCHSSPSGGM 331
Query: 400 CFCPAG----QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG--KSC 453
C+CP+G N ++T C+D D+C + G CDQ C + + C C EGY L ++
Sbjct: 332 CYCPSGYTISSNDSRT-CIDFDDCKMWGVCDQLCEDRVGHHQCHCVEGYFLEHHRHCRAN 390
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLNG 481
T+ V ASIIFS+ D+ L+G
Sbjct: 391 TSAGV-----ASIIFSNGRDLLIGDLHG 413
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 141/304 (46%), Gaps = 33/304 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P + +C ++C+ CDG DC +G DE C C+ +F C G +CI ++
Sbjct: 1151 CEPRQFQC-PDHRCIDPYYVCDGDKDCVDGADEHD-CIYNCSGTEFKCVSGDQCISSYYQ 1208
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP NW CD +DC+ D +
Sbjct: 1209 CDGVFDC-NDHSDETDCPTRPPGMCHQNEFQCQSDGNCIPANWECDGHLDCA-----DGS 1262
Query: 281 DEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE H+C +L + C+ W+CD + DC D+ D D
Sbjct: 1263 DE----HHRCPARTCPPSLFRCDNGNCVYRAWICDGDNDCR--DMSDERD------CPTQ 1310
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + +C + CV LSK CD DC NG DE P CN ++ N C+H+C P
Sbjct: 1311 PFRCPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTHECIQGP 1370
Query: 396 RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
GA C CP G N +KT C D +EC G C Q C N S+ C C EGY L +G++
Sbjct: 1371 FGAQCTCPVGYQLTNDSKT-CEDINECDPPGFCSQHCYNERGSFRCYCDEGYILETNGRT 1429
Query: 453 CTAV 456
C
Sbjct: 1430 CKVA 1433
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/368 (29%), Positives = 160/368 (43%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
++ C NE RC +S +C+ +CD DC++G DE C C+ QF C G+CI
Sbjct: 2863 SMTCTNNEFRC-TSGRCIPAHWYCDQGVDCADGSDEPASCEPHVRTCSSDQFRCDDGRCI 2921
Query: 219 PESWKCDGFVDCLE-DGSDEPNTCIHQ-CFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
P +W CDG DC + D+ ++C ++ C + CA ++ +CIP W+CD + DCS
Sbjct: 2922 PATWICDGDNDCGDMSDEDQRHSCANRSCTATEFTCANNRPPLRRCIPRAWVCDGDADCS 2981
Query: 273 -----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQC 297
+D D +DE + C Q C
Sbjct: 2982 DALDEHQNCTRRSCTENEFTCNNGLCIRSAYRCDRRNDCGDASDERGCIYEPCQQHQFTC 3041
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI ++CD + DC D +DE + S C P +C + N C+ ++
Sbjct: 3042 Q-NGRCISKAYICDGDNDCG-----DESDE-LEHLCSTPEATCSPQHFKCDNGN-CIEMA 3093
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
K C+ +C + DE G N +D C H C+ T C C G +K C
Sbjct: 3094 KVCNRLDECLDNSDEKGCGINECSDPSISGCDHVCTDTQTSFYCSCHPGYKLMSDKRTCD 3153
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY PDGKSC + +IFS+
Sbjct: 3154 DIDECNETPSVCSQICENTAGSYICKCAPGYIREPDGKSCRQ---NSNISPYLIFSNRYY 3210
Query: 474 IRRIHLNG 481
+R + +G
Sbjct: 3211 LRNLTADG 3218
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 116/248 (46%), Gaps = 32/248 (12%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKC 217
+H +C + C + +C+ + CDG+ DC +G DE P C + C GQF C G C
Sbjct: 3508 AHCLPMCSSTQFLCADTERCIPIWWKCDGQRDCRDGSDEPPTCPHRYCPVGQFQCNDGNC 3567
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ C+ DC + ++P C HQC Q QCA +K+CIP W CD E DC
Sbjct: 3568 TSPHFLCNTQPDCHDRSDEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG---- 3622
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DED C GQ +C + +CIP +W CD + DC DN+DE + +
Sbjct: 3623 -DNSDEDTTHCASRTCPPGQFKCD-NGRCIPESWKCDVDDDCG-----DNSDEPFHECMG 3675
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS------ 388
+ + C +S +C+ L C+G DC + DE CE + CS
Sbjct: 3676 PAYRCDNHTQFSCRTSYRCIPLWAVCNGNDDCRDNSDE-------QGCEEMTCSPFGDFR 3728
Query: 389 ---HKCSP 393
H+C P
Sbjct: 3729 CDNHRCIP 3736
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 148/367 (40%), Gaps = 62/367 (16%)
Query: 163 VLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C P + RC +++C+ L CDG DC + DE ECT ++ C +CIP
Sbjct: 3719 MTCSPFGDFRC-DNHRCIPLRWKCDGDNDCGDQSDEHNCSPRECTESEYRCDNLRCIPSR 3777
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDN 279
W CD DC ED SDE + + C G QC S C+ + CD DC +D+I
Sbjct: 3778 WVCDHDDDC-EDNSDERDCELRTCHPGYFQCN-SGHCVAERFRCDGNADCLDFSDEITCP 3835
Query: 280 TDED---------------------W-------------DKFHQCFNGQVQCAL-----S 300
T W ++ H C + + +
Sbjct: 3836 TRYPNGTYCPPMMFECKNHVCIQPYWKCDGDNDCGDDSDEELHLCLDIACESPFRFRCEN 3895
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CI + LC++E DC D +DE + C E +C + N C+ L C
Sbjct: 3896 NRCIYSHELCNQEDDCG-----DGSDEKEEHCREPTPRPCTTEEFKCSNGN-CIPLHYVC 3949
Query: 361 DGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNP---NKTQCVD 415
D DC + DE G + C C H C+ G +C C G N+ C D
Sbjct: 3950 DNYDDCGDHFDEMGCNPGTERTCAENICEHNCTNLNEGGFICSCRPGYKASENNRNSCDD 4009
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVD 473
+EC I G+C Q C N+ SY C C +G+ D GK C A P ++ V
Sbjct: 4010 INECEIFGTCTQDCKNSKGSYECFCADGFKSVGDQQGKQCAA----NGNPPLLLLPDNVR 4065
Query: 474 IRRIHLN 480
IRR +++
Sbjct: 4066 IRRYNIS 4072
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 134/337 (39%), Gaps = 83/337 (24%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +AGM G+ + +++ ++WP+ L IDY D LYW D+HLN +E +DG H +
Sbjct: 3348 IGRAGMDGKEKMVIISTKLEWPNGLTIDYTNDKLYWADAHLNYIEYSDLDGHHRHTVYDG 3407
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
L HP + + S + V ++ PF
Sbjct: 3408 TLPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSGRTVLVNTTHRPFDIHVYHPYRQPFV 3467
Query: 202 NAECTPGQFSCG---MGKCIPESWKC---DGFVDCLEDGSDEPNTCIHQCFNGQVQCALS 255
N C C + K + + C D F+ ++ GS C+ C + Q CA +
Sbjct: 3468 NNPCGTNNGGCSHLCLIKAGGQGYSCECPDNFM-IVQFGSTA--HCLPMCSSTQFLCADT 3524
Query: 256 KKCIPHNWLCDEEMDC-----------------------------------STDDIVDNT 280
++CIP W CD + DC + D D +
Sbjct: 3525 ERCIPIWWKCDGQRDCRDGSDEPPTCPHRYCPVGQFQCNDGNCTSPHFLCNTQPDCHDRS 3584
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED HQC Q QCA +K+CIP W CD E DC DN+DED S
Sbjct: 3585 DEDPVLCANHQCETHQWQCA-NKRCIPEAWQCDREDDCG-----DNSDEDTTHCASRT-- 3636
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C P + +C + +C+ S CD DC + DE PF
Sbjct: 3637 -CPPGQFKC-DNGRCIPESWKCDVDDDCGDNSDE-PF 3670
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 138/390 (35%), Gaps = 117/390 (30%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P L+CGS + +CV CDG DC + DE N C+ F+C G+CI
Sbjct: 1023 PPTLQCGSYSFSCNNGRCVPRYYQCDGIDDCHDNSDEQNCGSLNNTCSSSAFTCANGQCI 1082
Query: 219 PESWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
P W+CD DC DGSDE P +C F + +CIP WLCD + DC
Sbjct: 1083 PSRWRCDKHNDCF-DGSDELRCPTQGPTSCPETLFTCD-----NNRCIPRIWLCDTDNDC 1136
Query: 272 -----------------------------------STDDIVDNTDEDWDKFHQCFNGQVQ 296
D VD DE D + C + +
Sbjct: 1137 GDGSDEKNCTFTGTCEPRQFQCPDHRCIDPYYVCDGDKDCVDGADEH-DCIYNCSGTEFK 1195
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C +CI + CD DC +D D TD + +CH NE +C S C+
Sbjct: 1196 CVSGDQCISSYYQCDGVFDC--NDHSDETDCP-----TRPPGMCHQNEFQCQSDGNCIPA 1248
Query: 357 SKFCDGKPDCSNGEDE------------------------GPFCNNKADCENLKCSHKCS 392
+ CDG DC++G DE C+ DC ++ C
Sbjct: 1249 NWECDGHLDCADGSDEHHRCPARTCPPSLFRCDNGNCVYRAWICDGDNDCRDMSDERDCP 1308
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVD--------------ADECLI---------DGSCDQ 427
P CP+ Q P + CV+ ADE + + C
Sbjct: 1309 TQPFR----CPSWQWQCPGHSICVNLSKVCDNSADCPNGADESPLCNQESCSDNNAGCTH 1364
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C C+C GY L D K+C +N
Sbjct: 1365 ECIQGPFGAQCTCPVGYQLTNDSKTCEDIN 1394
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F CG G+CIP W+CDG DC +D +DE C Q QC +CIPH+W+CD+E
Sbjct: 38 FRCGNGRCIPADWRCDGARDCSDD-TDEAGCPQPTCEGNQFQCQTDGECIPHSWVCDDEE 96
Query: 270 DCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + Q C+ + +CIP + CD DC+ D TDE
Sbjct: 97 DCE-----DGSDEHQQCPGRTCSSQQFTCS-NGQCIPSAYRCDRVKDCT-----DGTDER 145
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+Y + C ++ C S+ CDGK DC + DE
Sbjct: 146 DCRYPRCEQLSC--------ANGACFNASQRCDGKVDCRDTSDEA 182
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 25/222 (11%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C C G C CIP ++ CDG DC
Sbjct: 2791 NNGRCISLQYVCNGVNNCYDNGTSDERNCPERTCQSGFTKCQSTNICIPRTYLCDGDNDC 2850
Query: 231 LEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---K 286
+ + P C+ C N + +C S +CIP +W CD+ +DC+ D +DE
Sbjct: 2851 GDMSDESPTHCVSMTCTNNEFRCT-SGRCIPAHWYCDQGVDCA-----DGSDEPASCEPH 2904
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C + Q +C +CIP W+CD + DC D +DED ++ + C E
Sbjct: 2905 VRTCSSDQFRCD-DGRCIPATWICDGDNDCG-----DMSDEDQRHSCANRS--CTATEFT 2956
Query: 347 CGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C ++ +C+ + CDG DCS+ DE C ++ EN
Sbjct: 2957 CANNRPPLRRCIPRAWVCDGDADCSDALDEHQNCTRRSCTEN 2998
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 15/202 (7%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C++ CD DC +G DE A C P F+CG G+C+P ++CD + DC D
Sbjct: 2713 HCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCVPYHYRCDHYNDC-GDN 2771
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CI ++C+ +C + +DE C +G
Sbjct: 2772 SDEAGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYDN---GTSDERNCPERTCQSGF 2828
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP +LCD + DC D +DE S + C NE RC +S +C+
Sbjct: 2829 TKCQSTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---MTCTNNEFRC-TSGRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFC 376
+CD DC++G DE C
Sbjct: 2880 PAHWYCDQGVDCADGSDEPASC 2901
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 128/348 (36%), Gaps = 98/348 (28%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R+P+V+ N+ WP+ L +DY + LYW D++L +E + G++ V+
Sbjct: 2531 NAKIERATLGGNFRTPIVSTNLVWPNGLTLDYEEQQLYWADANLQKIERCTLTGTNREVI 2590
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKFCDGKPD--------- 190
HP + + S+Q V + D
Sbjct: 2591 VSTALHPFAMTLFDQHIYWTDWNTRSIYRANKYDGSDQIVMIMNLPQRPMDIHVWAKSKQ 2650
Query: 191 --CSNGEDE-GPFCNAECTPGQFSCGMGKCIPES--WKCDGFVDCLEDGSDEPNTCIHQC 245
C+N ++ C+ C PG + +C E + + C+ D +T C
Sbjct: 2651 QQCTNPCNQFNGGCSHICAPGP-AGAECQCPSEGRWYLANNNKHCIVDNGTRCDTGFFTC 2709
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKC 303
NG CI W CD + DC D +DE FH C C + +C
Sbjct: 2710 LNGH--------CISERWKCDNDNDCG-----DGSDELESVCAFHTCQPTAFTCG-NGRC 2755
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDE--------DWDKYFSHN------------------- 336
+P+++ CD DC DN+DE D F+ N
Sbjct: 2756 VPYHYRCDHYNDCG-----DNSDEAGCLFRTCDSHTEFTCNNGRCISLQYVCNGVNNCYD 2810
Query: 337 ----------AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +C S+N C+ + CDG DC + DE P
Sbjct: 2811 NGTSDERNCPERTCQSGFTKCQSTNICIPRTYLCDGDNDCGDMSDESP 2858
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CH NE +C S C+ + CDG DC++G DE C A C P F C G C+ +W
Sbjct: 1231 MCHQNEFQCQSDGNCIPANWECDGHLDCADGSDEHHRCPARTCPPSLFRCDNGNCVYRAW 1290
Query: 223 KCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC D SDE + T +C + Q QC C+ + +CD DC
Sbjct: 1291 ICDGDNDC-RDMSDERDCPTQPFRCPSWQWQCPGHSICVNLSKVCDNSADC 1340
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 158/414 (38%), Gaps = 96/414 (23%)
Query: 32 STDDIVDNTDEDWDKYFKRILNGT-------------HTLALEFNHRNQSLCFIQQQNVS 78
+ DD + +D D +K+ +G+ LA ++ +N + +++S
Sbjct: 752 AQDDTIFFSDTSRDMIYKQKTDGSGREILTANRVESVEDLAFDWISKNLYWTDPRYRSIS 811
Query: 79 SVRL----RCAQINDLLNSWDLPA----PEIFPLD----ERLEKAGMHGENRSPLVTKNI 126
+RL R A + +L N + IF D ++ +A G + P+V +
Sbjct: 812 VMRLADKSRRAIVQNLNNPRSIVVHPVIGYIFWTDWFRPAKIMRAWSDGSHGLPIVNTTL 871
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------SHNAVLCHPNEL---------- 170
WP+ L ID++ LYW D+ + +E DG A + HP L
Sbjct: 872 GWPNGLAIDWSSLRLYWVDAFFDKIEHSTFDGLDRRTLERVAQMTHPFGLTIFGGYAYFT 931
Query: 171 ---------------------RCGSSNQCVALSKFCD-----GKPDCSNGEDEGPFCNAE 204
R G SN + K D G C+ G + C+
Sbjct: 932 DWRLGAIVRVRKSDGGEMTIIRRGISN--IMHVKAYDAHSQIGSNYCNRGTNPNGDCSHF 989
Query: 205 CTP---GQFSCGMGKCIPESWKCDG-FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
C P Q CG P K + C+ED S+EP T QC + C + +C+P
Sbjct: 990 CFPVPNFQRVCG----CPYGMKLGSNQLTCVEDPSNEPPTL--QCGSYSFSCN-NGRCVP 1042
Query: 261 HNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+ CD DD DN+DE + C + CA + +CIP W CD+ DC
Sbjct: 1043 RYYQCD-----GIDDCHDNSDEQNCGSLNNTCSSSAFTCA-NGQCIPSRWRCDKHNDC-- 1094
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + + C P L +N+C+ CD DC +G DE
Sbjct: 1095 ---FDGSDE--LRCPTQGPTSC-PETLFTCDNNRCIPRIWLCDTDNDCGDGSDE 1142
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A M G+ R LV++++ WP+ L IDY N D +YW DS N +ES+R DG+ V+
Sbjct: 4211 KIECAWMDGQQRRTLVSEDLGWPTGLSIDYLNNDRIYWSDSKENIIESMRHDGTDRTVVL 4270
Query: 166 H 166
H
Sbjct: 4271 H 4271
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR L+ + WP+ + +D LYW DS + +E+V DG +
Sbjct: 537 DPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRLYWVDSRFDYIETVTYDGLQRRTI 596
Query: 165 CHPNEL 170
H L
Sbjct: 597 AHGGSL 602
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+EKA M G+ R+ +++ I WP+ L IDY +LY+ D++L+ ++ +G +
Sbjct: 1580 RIEKASMDGKLRTVIISSKIYWPNGLSIDYPNKLLYFADAYLDYIDFCDYNGNNRRQVVA 1639
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1640 SDLVLQHPHGL 1650
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 70/163 (42%), Gaps = 22/163 (13%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL------NGTHTLALEFNHRNQSL--CFIQQ 74
+ CD S+ + + D YF+ ++ NG +A+++ N F+ +
Sbjct: 2112 YWCDYSSTVSSQNAIRKIKPD-GSYFRNVVTNGIGRNGIRGIAIDWVAGNLYFTNAFLTE 2170
Query: 75 QNVSSVRLRCAQINDLL-NSWDLPAPEI------------FPLDERLEKAGMHGENRSPL 121
+ +RL LL + D+P + + + ++E++ + NR+ L
Sbjct: 2171 TFIEVLRLNTTYRRVLLKTTIDMPRHIVVDPKNRYLFWADYGQNPKIERSFLDCTNRTVL 2230
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
V++ I P L ID++ +YW D L+ + ++ DG ++
Sbjct: 2231 VSEGIVTPRGLAIDHSNGYVYWVDDSLDMIARIQPDGGDVEIV 2273
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 4/115 (3%)
Query: 58 LALEFNHRNQSLC-FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD---ERLEKAGM 113
L L RNQ + I Q+ S L N + +D + IF D +++ A
Sbjct: 1438 LLLLVASRNQIVVDNITSQSHSIYSLIRDGRNIVAIDFDSISDRIFWSDTTQDKIWSAYQ 1497
Query: 114 HGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+G +R + + S+ +D+ LYW D L T+E ++DGSH VL N
Sbjct: 1498 NGTDRKVVFDSGVTVTESIAVDWVGRNLYWTDFVLETIEVSKMDGSHRTVLISEN 1552
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 47/111 (42%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + A Q + C + + G C+Q C +H
Sbjct: 630 NKFSESNPQVIYQSSLRPYGVTVYHAARQPYVRNPCGNNN-----GGCEQICVLSHKTDN 684
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 685 DGLGYRCRCILGFDLHVDGRHCVAVQ------QFLLFSSQLAVRGIPFNLS 729
>gi|344297687|ref|XP_003420528.1| PREDICTED: very low-density lipoprotein receptor isoform 2
[Loxodonta africana]
Length = 845
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QCV +S CDG+ DC +GEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCVPVSWRCDGESDCDSGEDEENCGNVTCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD + DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGPHEFQCSTSS-CIPLSWVCDNDADCSDKSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC+ S +CI W CD + DC D +DE + C
Sbjct: 231 RQPVTHTRCPASEIQCS-SGECIHKKWRCDGDPDCK-----DGSDE-----VHCPSRTCQ 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C CV ++ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCVHGTRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 DREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE CT F C G+C
Sbjct: 26 GAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCTESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S +C+P +W CD E DC +
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCVPVSWRCDGESDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNVTCSADEFTCSSGRCVSRNFVCNGQDDCSDGSDELDCAPPTCGPHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH--NAVLCHPNELRCGSSNQCVALSK 358
CIP +W+CD + DCS D +DE ++ C +E++C SS +C+
Sbjct: 204 -SCIPLSWVCDNDADCS-----DKSDESLEQCGRQPVTHTRCPASEIQC-SSGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVHCPSRTCQPDQFECEDGSCVHGTRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISQVCDREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKLLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|328720450|ref|XP_001946703.2| PREDICTED: very low-density lipoprotein receptor-like
[Acyrthosiphon pisum]
Length = 907
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 163/372 (43%), Gaps = 75/372 (20%)
Query: 164 LCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C+ +E C + +C+ L+ CDG PDCS+G DE CN C +F+CG GKCI + W
Sbjct: 131 VCNTDEFTCRKAKGECIPLTWMCDGNPDCSDGSDEKE-CNETCRDDEFTCGNGKCIQKIW 189
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC +DG+DE N C + C CI NW CD + DC+ D TDE
Sbjct: 190 VCDRDDDC-QDGTDELNCPNITCSESEFACVKDNTCITLNWRCDGDFDCT-----DQTDE 243
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ + QC + + +C C+ +W+CD +DC+ D +DE + HN
Sbjct: 244 IGCAESTRSSQCRSSEFECDDHSHCVIQSWVCDGSVDCA-----DGSDE--APHRCHNTT 296
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPF------------- 375
C ++ RC N C+ C G PDC++G DE P+
Sbjct: 297 -CRSDQFRC-RDNTCIPGFLHCSGTPDCADGSDEENCKEPVHKCDPYTEFDCGTDEAGGI 354
Query: 376 -------CNNKADCENLK------------------CSHKCSPTPRGAMCFC-PAGQNPN 409
C+ DC + C+ C P C C P + +
Sbjct: 355 CIPMEKVCDKNMDCPGFEDEEQESCNVNECLINNGGCTQICVDLPHTFRCACKPGYKLIS 414
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIF 468
C D +EC I+GSC Q C N +Y C C GY P D C A+ + AS++F
Sbjct: 415 NNTCDDVNECEIEGSCSQICINEKGTYKCECEPGYLRDPQDHTRCKAM----EGHASLLF 470
Query: 469 SSTVDIRRIHLN 480
S +IR+I L+
Sbjct: 471 SMQHNIRKISLD 482
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 144/385 (37%), Gaps = 117/385 (30%)
Query: 163 VLCHPNELRCGSSNQCVALS--------------------------------KF------ 184
V C + CG+ +CV L+ +F
Sbjct: 44 VECTLRQHTCGNG-KCVPLAWTCDGDDDCGDNTDELPDMCKTGKANVTCSENEFQCRNGH 102
Query: 185 -------CDGKPDCSNGEDEGP-FCNAE-CTPGQFSC--GMGKCIPESWKCDGFVDCLED 233
CD + DC +G DE P C C +F+C G+CIP +W CDG DC D
Sbjct: 103 CIALHWQCDNESDCKDGSDEDPKICQKRVCNTDEFTCRKAKGECIPLTWMCDGNPDC-SD 161
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
GSDE C C + + C + KCI W+CD + DC D TDE C
Sbjct: 162 GSDE-KECNETCRDDEFTCG-NGKCIQKIWVCDRDDDCQ-----DGTDELNCPNITCSES 214
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
+ C CI NW CD + DC+ D TDE S + C +E C + C
Sbjct: 215 EFACVKDNTCITLNWRCDGDFDCT-----DQTDE-IGCAESTRSSQCRSSEFECDDHSHC 268
Query: 354 VALSKFCDGKPDCSNGEDEGPF-------------------------------CNNKADC 382
V S CDG DC++G DE P C + +D
Sbjct: 269 VIQSWVCDGSVDCADGSDEAPHRCHNTTCRSDQFRCRDNTCIPGFLHCSGTPDCADGSDE 328
Query: 383 ENLK-CSHKCSPTPR--------GAMCF-----------CPAGQNPNKTQCVDADECLI- 421
EN K HKC P G +C CP ++ + C + +ECLI
Sbjct: 329 ENCKEPVHKCDPYTEFDCGTDEAGGICIPMEKVCDKNMDCPGFEDEEQESC-NVNECLIN 387
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTL 446
+G C Q C + ++ C+C GY L
Sbjct: 388 NGGCTQICVDLPHTFRCACKPGYKL 412
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+AGM G +R + + +++WP+ + +D LYW D+ L+T+ S DGS ++
Sbjct: 603 NAKIERAGMDGTHREVIASFDVKWPNGITLDLVSKRLYWVDAKLHTISSCNFDGSQRRLV 662
>gi|292627062|ref|XP_001920591.2| PREDICTED: low-density lipoprotein receptor-related protein 1 [Danio
rerio]
Length = 4547
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 155/330 (46%), Gaps = 37/330 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C+P ++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W C
Sbjct: 980 CYPLTQFTCANGRCINVNWRCDNDNDCGDNSDEAG-CSHSCSSVQFKCNSGRCIPEYWTC 1038
Query: 225 DGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
DG DC + + C +Q C + QC + CIP W CD + DC +
Sbjct: 1039 DGDNDCGDYSDETHANCTNQATRPPGGCHTDEFQCRMDGLCIPMRWRCDGDTDC-----M 1093
Query: 278 DNTDED--WDKFHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE H C + C S +CI W+CD + DC DN+DE+ +
Sbjct: 1094 DLSDEKNCEGVTHMCDPAVKFACKDSARCISKAWVCDRDSDCE-----DNSDEE-----N 1143
Query: 335 HNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
A+ C + C S++ C+ K CDGK DC + DE CN EN CSH C+
Sbjct: 1144 CEALECKLSHHVCASNDSICLPPEKLCDGKDDCPDASDE-KLCN-LCTVENGGCSHNCTI 1201
Query: 394 TP-RGAMCFCPAGQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P G +C CPAG NKT C C C Q C + C+C EG+ L PD
Sbjct: 1202 APGEGVLCSCPAGMELGTDNKT-CQIQSFCAKHLKCSQRCVQEKATVKCACYEGWALGPD 1260
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G+SC + + + IIFS+ +IRRI L
Sbjct: 1261 GESCKSTDPFK---PFIIFSNRHEIRRIDL 1287
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/335 (33%), Positives = 157/335 (46%), Gaps = 37/335 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GMGKCIPES 221
C N+ CG+ ++C+ + CDG DC +G DE C A+ C P F C G CI +
Sbjct: 2737 FCASNQFECGN-HRCIFKTWVCDGTDDCGDGTDEDSRCKAKTCGPDSFQCPGSHVCILQR 2795
Query: 222 WKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC DG DE C+ C + + QC S+ CIP N++CD ++DC
Sbjct: 2796 WVCDGDKDC-PDGGDEGLKAGCVFNKTCDDTEFQCQNSQ-CIPKNFMCDHDIDCR----- 2848
Query: 278 DNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + ++ C CA + NW CD E DC D +DE +
Sbjct: 2849 DGSDESPECEYPTCGPNDFHCANGQCLKQKNWACDGEFDCR-----DQSDE------APK 2897
Query: 337 AVLCHPNELRCG------SSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKCSH 389
+ C E RC SS +CV + CD DC +G DE F N + + CS
Sbjct: 2898 NLQCTDTESRCNDTAFLCSSGKCVNETLLCDNNNDCGDGSDENNCFVNECLNSKLSGCSQ 2957
Query: 390 KCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C G C C AG + CVD DEC C Q C NTH S+ C C +G+ R
Sbjct: 2958 LCEDLKIGFKCRCNAGFRLKQDGKTCVDLDECSTVYPCSQRCINTHGSFHCLCVDGFVPR 3017
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
PD T+ +E +IF++ +R+++L+GS
Sbjct: 3018 PDDH--TSCKSTAEEEPFLIFANRYYLRKLNLDGS 3050
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE D C PNE C
Sbjct: 37 CSPKQFVCKDQVTCISKGWRCDGEKDCP-----DGSDESPDICHHTQVTQCPPNEFECRG 91
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD-CENLKCSHKCSPTPRGAMCFCPAGQ-- 406
++ C+ LSK CDG PDC++G DEGP C A C + C + CS T G C+C G
Sbjct: 92 TDVCIHLSKLCDGVPDCTDGRDEGPHCRELASKCSIMDCQYNCSVTLSGPKCYCKNGYEV 151
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D +EC + G+C QTCTN+ SY CSC EGY + D +SC A N P D +
Sbjct: 152 GEDGKTCKDFNECAVYGTCSQTCTNSEGSYTCSCVEGYLPQLDNRSCKAKNDPVDRLPFL 211
Query: 467 IFSSTVDIRRIHLNGS 482
+ +++ +I+ L+G+
Sbjct: 212 LIANSQNIQATSLSGA 227
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 118/235 (50%), Gaps = 20/235 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C GEDE C P QF C + K CIP W
Sbjct: 3415 VCLPSQFKCSHPSRCIPGILRCNGQNNCGQGEDEKDCPEVTCAPNQFQCAITKRCIPRVW 3474
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ D SDEP C +C + +C S +CIP W CD E DC D D
Sbjct: 3475 VCDRDYDCV-DESDEPANCTQMKCGVDEFRCKDSGRCIPSRWTCDGEDDCG--DASDEPK 3531
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE +K C
Sbjct: 3532 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDE--EKCVPRQ---CS 3579
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTP 395
+E C S+ +C+A CDG DCS+G DE C+ K + + +C + C P P
Sbjct: 3580 ESEFAC-SNGRCIAGRWKCDGDHDCSDGSDEDG-CDLKCEEDQFQCKNGHCIPLP 3632
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 115/273 (42%), Gaps = 54/273 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG-QFSCGMGKCIPESW 222
C P E C +N+C+ CDG DC + DE P CN P +F C +CIP W
Sbjct: 858 CQPGEFAC-KNNRCIQERWKCDGDNDCLDNSDETPDLCNQHTCPADRFKCQNNRCIPLRW 916
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS--------- 272
CDG DC D + +TC+ + C + Q CA S +CIP +W+CD + DC
Sbjct: 917 LCDGDNDCGNDEDESNSTCLARTCPSNQYPCA-SGRCIPVSWMCDLDDDCGDRSDEPASC 975
Query: 273 ---------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D DN+DE H C + Q +C S +CIP
Sbjct: 976 AYPTCYPLTQFTCANGRCINVNWRCDNDNDCGDNSDEAGCS-HSCSSVQFKCN-SGRCIP 1033
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD + DC D D T + + CH +E +C C+ + CDG D
Sbjct: 1034 EYWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRMDGLCIPMRWRCDGDTD 1091
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C + DE +CE + +H C P + A
Sbjct: 1092 CMDLSDE-------KNCEGV--THMCDPAVKFA 1115
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 102/227 (44%), Gaps = 25/227 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C RC + +C+ S +CD DC +G DE P C+ +F C G CI S +
Sbjct: 2566 MCKKGYRRC-INGRCIKHSSWCDSTDDCGDGSDELPCNMTLCSAAEFQCKDGSCITNSSR 2624
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQV---------QCALSKKCIPHNWLCDEEMDCSTD 274
C+ VDC ED SDE N C + + +C + C +W CD DC
Sbjct: 2625 CNQVVDC-EDASDEMNCSPTDCSSYYLLGVKGMTFERCEFTTLCFAPSWRCDGSNDCG-- 2681
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYF 333
D D + + +C C S +CIP +W CD+E DC D DE +K+F
Sbjct: 2682 DFSDERNCPEKRQQKCSENNFACP-SGRCIPMSWTCDKENDCE-----DGADEAHCEKFF 2735
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C N+ CG +++C+ + CDG DC +G DE C K
Sbjct: 2736 Q----FCASNQFECG-NHRCIFKTWVCDGTDDCGDGTDEDSRCKAKT 2777
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 158/442 (35%), Gaps = 137/442 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A + L+NS L P +D R
Sbjct: 3104 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRSVLVNS-GLREPRAVAVDVRNGYL 3162
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ + GM G +R ++ I WP+ L +D+
Sbjct: 3163 YWSDWGDVPHIGRIGMDGTDRQIIIQDKITWPNGLTLDFINDRIYWADAREDYIAFASLD 3222
Query: 137 --------NQDI------------LYWCD----------SHLNTVESVRVDGSHNAV--- 163
N DI +YW D L T +++ + H +
Sbjct: 3223 GSNRHTVLNHDIPHIFAMTLFEEFIYWTDWETKSINRAHKTLGTNKTLLISTLHRPMDIH 3282
Query: 164 LCHPN-----------ELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQ 209
+ HP+ E G SN C+ LS K C +G C + CT Q
Sbjct: 3283 IFHPSRQPEVSGHPCQEDNGGCSNLCL-LSPGGGYKCACPTNFYLAADGKQCLSNCTASQ 3341
Query: 210 FSCGMGKCIPESWKCDGFVDC--------------------------------------- 230
F C KCIP WKCD DC
Sbjct: 3342 FVCKNDKCIPFWWKCDTEDDCGDRSDEPADCPEFKCRPGQFQCGTGLCTNPAYICDGDND 3401
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+D SDE N IH C Q +C+ +CIP C+ + +C + DE C
Sbjct: 3402 CQDNSDEANCDIHVCLPSQFKCSHPSRCIPGILRCNGQNNCGQGE-----DEKDCPEVTC 3456
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 3457 APNQFQCAITKRCIPRVWVCDRDYDC-----VDESDEP----ANCTQMKCGVDEFRCKDS 3507
Query: 351 NQCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 3508 GRCIPSRWTCDGEDDCGDASDE 3529
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHN 262
+C PG+F+C +CI E WKCDG DCL++ + P+ C H C + +C + +CIP
Sbjct: 857 QCQPGEFACKNNRCIQERWKCDGDNDCLDNSDETPDLCNQHTCPADRFKCQ-NNRCIPLR 915
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD + DC D+ N+ C + Q CA S +CIP +W+CD + DC
Sbjct: 916 WLCDGDNDCGNDEDESNSTC---LARTCPSNQYPCA-SGRCIPVSWMCDLDDDCG----- 966
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE + C+P ++ +C+ ++ CD DC + DE C++
Sbjct: 967 DRSDEPASCAYP----TCYPLTQFTCANGRCINVNWRCDNDNDCGDNSDEAG-CSHSCSS 1021
Query: 383 ENLKC-SHKCSP 393
KC S +C P
Sbjct: 1022 VQFKCNSGRCIP 1033
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 116/291 (39%), Gaps = 61/291 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE----CTPGQFSCGMGKCIPE 220
C ++ +C + C+ L CD DC +G DE C C +F C C P
Sbjct: 3616 CEEDQFQC-KNGHCIPLPWRCDADVDCLDGSDE-ERCEITGMRVCLLQEFQCNNTLCKPL 3673
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH-QCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SWKCDG DC ++ + P C H QC + +C ++ C+ + LCD D+ D
Sbjct: 3674 SWKCDGEDDCGDNSDENPEACRHFQCPPTRNFRCRNNRVCLTRSKLCD-----GVDNCGD 3728
Query: 279 NTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKYFS 334
N+DE D C Q +C + KCI N C+ DC +D+I TD +
Sbjct: 3729 NSDEASCDYESTCDKDQFRCT-NGKCISANLRCNFFNDCEDYGSDEIGCKTDTMLND--- 3784
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C N+ CG ++ + SNG D FC+ K
Sbjct: 3785 -----CKSNKSLCGDGDEAHCV----------SNGTDT--FCSCK--------------- 3812
Query: 395 PRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
P Q+ C D DEC G C C NT SY CSC + +T
Sbjct: 3813 --------PGFQSVRHNTCEDKDECKQFGVCSHVCNNTKGSYKCSCHKYFT 3855
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW DS L+ + SVR+DGS V
Sbjct: 4030 KIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERLYWADSKLSVISSVRLDGSDPVV 4086
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G R LV +I WP+ + IDY + +LYWCD+ + +E + ++ N L
Sbjct: 2035 RIERSRLDGSERVVLVNVSISWPNGISIDYQEGLLYWCDARTDKIERINLETGENREL 2092
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
C PNE C ++ C+ LSK CDG PDC++G DEGP C
Sbjct: 82 CPPNEFECRGTDVCIHLSKLCDGVPDCTDGRDEGPHC 118
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 11/166 (6%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G CI S CD C + ++ C ++ C G +C ++ +CI H+ CD
Sbjct: 2530 EFECGNGDCIDYSLTCDSLAHCKDKSDEKQAYCANRMCKKGYRRC-INGRCIKHSSWCD- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
STDD D +DE C + QC CI ++ C++ +DC D ++ +
Sbjct: 2588 ----STDDCGDGSDELPCNMTLCSAAEFQCK-DGSCITNSSRCNQVVDCEDASDEMNCSP 2642
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D Y+ V E RC + C A S CDG DC + DE
Sbjct: 2643 TDCSSYYLL-GVKGMTFE-RCEFTTLCFAPSWRCDGSNDCGDFSDE 2686
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 115/314 (36%), Gaps = 56/314 (17%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+W+ +P I +A + G N ++ NI+ P+ L ID+ + LY+ D+ +
Sbjct: 2349 FWTNWNEQSPSIM-------RASLSGANVLVIIGNNIRTPNGLAIDHRAEKLYFSDATFD 2401
Query: 150 TVESVRVDGSHNAVL-----CHPNELRCGS---------SNQCVALSKFCDGKPDCSNGE 195
+E DGS V+ HP L + K+
Sbjct: 2402 KIERCEYDGSRRFVVLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADKYGRDMKVLRADI 2461
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKC--------DGFVDCLEDGSDE---PNTCIHQ 244
+ P SC C+ + C +G V+C G + NTC+ +
Sbjct: 2462 PQQPMGIIAVAKDTNSCEFSPCLTNNGGCQDLCLITSEGRVNCSCRGERKLLGDNTCVAE 2521
Query: 245 CFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCA 298
+ +C + CI ++ CD C D +DE + C G +C
Sbjct: 2522 NTTCNSVDEFECG-NGDCIDYSLTCDSLAHCK-----DKSDEKQAYCANRMCKKGYRRC- 2574
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
++ +CI H+ CD STDD D +DE N LC E +C C+ S
Sbjct: 2575 INGRCIKHSSWCD-----STDDCGDGSDE-----LPCNMTLCSAAEFQC-KDGSCITNSS 2623
Query: 359 FCDGKPDCSNGEDE 372
C+ DC + DE
Sbjct: 2624 RCNQVVDCEDASDE 2637
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 108 LEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ KA M G N L+T K + WP+ L +D Q +LYW D++ + +E V ++ + +
Sbjct: 686 IRKAWMDGSNAGILLTSKTVLWPNGLSLDIQQGLLYWVDAYYDRIEMVLLNTTERRTVYE 745
Query: 167 PNEL 170
EL
Sbjct: 746 GQEL 749
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P+ + +D ++YW D++L+ +E V +G + +
Sbjct: 354 KVERCDMDGQNRTKLVDSKIVFPNGITLDLANKLVYWTDAYLDYIEVVDYEGKNRHTI 411
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN----AECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C+ +C P +F C G CI
Sbjct: 37 CSPKQFVCKDQVTCISKGWRCDGEKDCPDGSDESPDICHHTQVTQCPPNEFECRGTDVCI 96
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S CDG DC DG DE C
Sbjct: 97 HLSKLCDGVPDCT-DGRDEGPHC 118
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-PNTCIH----QCFNGQVQCALSKKC 258
C+P QF C CI + W+CDG DC DGSDE P+ C H QC + +C + C
Sbjct: 37 CSPKQFVCKDQVTCISKGWRCDGEKDC-PDGSDESPDICHHTQVTQCPPNEFECRGTDVC 95
Query: 259 IPHNWLCDEEMDCS 272
I + LCD DC+
Sbjct: 96 IHLSKLCDGVPDCT 109
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD +P R+E A M GE R + T WP+ L +DY + + W D+ + +
Sbjct: 1409 WDASSP-------RIEAASMSGEGRRTIHKETGIGGWPNGLTVDYLERRILWIDARSDAI 1461
Query: 152 ESVRVDGS 159
S DGS
Sbjct: 1462 YSAAYDGS 1469
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 3456 CAPNQFQCAITKRCIPRVWVCDRDYDC-----VDESDE 3488
>gi|326671513|ref|XP_002663730.2| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Danio rerio]
Length = 1389
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 108/318 (33%), Positives = 149/318 (46%), Gaps = 35/318 (11%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ ++ CD DC + DE C+ C+ QF C G+CIP+ W CDG DC + +
Sbjct: 79 RCININWRCDNDNDCGDNSDEAG-CSHSCSSAQFKCNSGRCIPDYWTCDGDNDCGDYSDE 137
Query: 237 EPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKF 287
C +Q C + QC + CIP W CD + DC +D +DE
Sbjct: 138 THANCTNQATRPPGGCHTDEFQCRMDGLCIPLRWRCDGDTDC-----MDLSDEKNCEGVT 192
Query: 288 HQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
H C + C S +CI W+CD + DC DN+DED + A++C +
Sbjct: 193 HMCDPAVKFGCRDSARCISKAWVCDGDSDCE-----DNSDED-----NCEALVCKLSHHV 242
Query: 347 CGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPA 404
C + SN C+ K CDGK DC +G DE C + EN CSH C+ P G +C CP
Sbjct: 243 CANDSNICLPAEKLCDGKDDCPDGSDE-KLC-DLCSLENGGCSHNCTVAPGEGVLCSCPL 300
Query: 405 GQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G N C C C Q C + CSC EG+ L PD +SC + + +
Sbjct: 301 GMELGTNNKTCQIQGFCAKHLKCSQRCEQDKFNVKCSCYEGWALEPDMESCRSTDPFK-- 358
Query: 463 PASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 359 -PFIIFSNRHEIRRIDLH 375
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 104/216 (48%), Gaps = 22/216 (10%)
Query: 184 FCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
CDG DC N EDE C+A C P Q+SC G+CIP SW CD DC D SDEP+TC
Sbjct: 4 LCDGDNDCGNDEDESNTTCSARTCPPNQYSCDSGRCIPISWTCDLDDDC-GDRSDEPSTC 62
Query: 242 IH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+ CF + +CI NW CD + DC DN+DE H C + Q +C S
Sbjct: 63 AYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSDEA-GCSHSCSSAQFKCN-S 115
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CIP W CD + DC D D T + + CH +E +C C+ L C
Sbjct: 116 GRCIPDYWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRMDGLCIPLRWRC 173
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR 396
DG DC + DE +CE + +H C P +
Sbjct: 174 DGDTDCMDLSDE-------KNCEGV--THMCDPAVK 200
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R+ LV +I WP+ + IDY +LYWCD+ + +E + ++ G + V+
Sbjct: 1078 RIERSRLDGSGRAVLVNVSISWPNGISIDYQDGLLYWCDARTDKIERINLETGENREVVL 1137
Query: 166 HPNEL 170
N +
Sbjct: 1138 SSNNM 1142
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 497 WDASMP-------RIEAASMSGHGRRTIHKETGSGGWPNGLTVDYLERRILWIDARSDAI 549
Query: 152 ESVRVDGS 159
S + DGS
Sbjct: 550 YSAKYDGS 557
>gi|332236955|ref|XP_003267665.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 1B [Nomascus leucogenys]
Length = 4634
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 921 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 979
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 980 LCDREDDCGDQADEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1039
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1040 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCHPD 1098
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1099 GNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1158
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1159 DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCD-ECS 1212
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1213 LNNGGCSYHCSVVPERGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKRTVKC 1272
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1273 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1311
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 161/400 (40%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C FSC G+CI +W CDG
Sbjct: 2679 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILNTWICDG 2738
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2739 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2793
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2794 V-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 2852
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E C + CDG DC + DE
Sbjct: 2853 IPKQFVCDHDDDCGDGSDESPQCGYRQCGPEEFSCADGRCLLNTQWQCDGDFDCPDHSDE 2912
Query: 373 GPF-----------------------------CNNKADCENLK----------------- 386
P C+NK DC +
Sbjct: 2913 APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVSG 2972
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC D C Q C NT+ +Y C CT+G
Sbjct: 2973 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSDFPCSQQCINTYGTYRCLCTDG 3031
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y ++PD C +++ DE +I + +IR+I +GS
Sbjct: 3032 YEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3068
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C ++C+
Sbjct: 110 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYRCTMVRN 169
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY+CSC EGY ++PD +SC
Sbjct: 170 STRCYCEDGFEIKEDGRSCKDQDECAVYGTCSQTCRNTHGSYICSCVEGYLMQPDNRSCK 229
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 230 AKIEPTDRPPILLIANFETIEVFYLNGS 257
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 146/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 3567 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCD 3623
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3624 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3681
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3682 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3731
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3732 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEKMCNGIDDCGDNSDEDHCGGKPT 3791
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3792 YKARPCKKDEFTC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3850
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3851 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 3901
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3902 CVCDQNFQER 3911
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3352 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3410
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3411 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3464
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3465 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3514
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3515 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCI 259
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC +
Sbjct: 3348 CLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCAL 3406
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 3407 PA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-- 3458
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3459 ------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3504
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3558 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 3615
Query: 234 GSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3616 GEDEKSCDPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3668
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3669 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3719
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3720 LCKLHFWVCDGEDDCGDNSDEAP 3742
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 106/236 (44%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3471 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3530
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3531 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3582
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CIP W CD DC + + D + C +E
Sbjct: 3583 NCETSCSKDQFQCS-NGQCIPAKWKCDGHEDCKYGEDEKSCDP--------ASPTCSSSE 3633
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3634 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 3687
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3430 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3489
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3490 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3542
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3543 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3590
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3591 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 3619
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2598 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2656
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2657 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2714
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2715 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2762
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2763 -SAQKCISKHWICDGEDDCGDGLDESDSICGAVTCAADMFSCQGSHACVPRHWLCDGERD 2821
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2822 CPNGSDELSTAGCAPNNT 2839
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 125/338 (36%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 918 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 976
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC D++ T E +F
Sbjct: 977 RAWLCDREDDCGDQADEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1036
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K + C+ NE
Sbjct: 1037 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEF 1093
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1094 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1153
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1154 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSL 1213
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1214 NNGGCSYHCSVVPERGIVCSCPEGLQLNKDNKTCEIVD 1251
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D LN W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 686 VVDPLNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 745
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 746 WCDAYYDHIEKVFLNGTHRKIVYSGREL 773
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2550 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2609
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2610 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2663
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2664 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2706
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 117/313 (37%), Gaps = 55/313 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L T+E DGS V+
Sbjct: 2379 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGTIERCEYDGSQRHVIVKS 2438
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2439 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2498
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFNGQVQCAL---SKKC 258
+ C + C +G V+C G E N C+ + + + + +C
Sbjct: 2499 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYLEFECGNGEC 2558
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
I + CD C D +DE + + C G C +++CIPH LCD E DC
Sbjct: 2559 IDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGENDC 2612
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2613 G-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE---- 2657
Query: 377 NNKADCENLKCSH 389
+C N C+H
Sbjct: 2658 ---KNCNNTDCTH 2667
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4087 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4146
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4147 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4181
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G R+ LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2056 IGKARLDGSERAVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2115
Query: 166 HPN 168
N
Sbjct: 2116 GSN 2118
>gi|344297685|ref|XP_003420527.1| PREDICTED: very low-density lipoprotein receptor isoform 1
[Loxodonta africana]
Length = 873
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 165/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QCV +S CDG+ DC +GEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCVPVSWRCDGESDCDSGEDEENCGNVTCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD + DCS +D+ ++
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGPHEFQCSTSS-CIPLSWVCDNDADCSDKSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC+ S +CI W CD + DC D +DE + C
Sbjct: 231 RQPVTHTRCPASEIQCS-SGECIHKKWRCDGDPDCK-----DGSDE-----VHCPSRTCQ 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C CV ++ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCVHGTRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 DREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE CT F C G+C
Sbjct: 26 GAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCTESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S +C+P +W CD E DC +
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCVPVSWRCDGESDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNVTCSADEFTCSSGRCVSRNFVCNGQDDCSDGSDELDCAPPTCGPHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH--NAVLCHPNELRCGSSNQCVALSK 358
CIP +W+CD + DCS D +DE ++ C +E++C SS +C+
Sbjct: 204 -SCIPLSWVCDNDADCS-----DKSDESLEQCGRQPVTHTRCPASEIQC-SSGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVHCPSRTCQPDQFECEDGSCVHGTRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISQVCDREQDCRDWSDEPLKECNVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKLLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|609533|gb|AAC37668.1| very low density lipoprotein receptor [Mus musculus]
Length = 873
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 167/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+ G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTGSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 MSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTGSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>gi|344268384|ref|XP_003406040.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Loxodonta africana]
Length = 4643
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/304 (35%), Positives = 143/304 (47%), Gaps = 27/304 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIP 219
+A CH + +C ++C+ LS CDG DC++G DE C CT QF C G +CI
Sbjct: 1137 SAETCHITQFQC-PYHRCIDLSFVCDGDQDCADGSDEVD-CVFNCTASQFKCASGDQCIN 1194
Query: 220 ESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE P C + + QC CIP +W CD DC
Sbjct: 1195 NVKFCDGVFDC-RDHSDEIGCPTRPPGMCHSDEFQCQADGVCIPDSWECDGHPDC----- 1248
Query: 277 VDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ +DE + C C + C+ W+CD + DC D+ D D +
Sbjct: 1249 IHGSDEHLGCLPKTCPPTHFLCD-NGNCVFKTWICDGDNDCR--DMSDERD------CAT 1299
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPT 394
A C + +C + CV LS CD PDC NG DE P CN + E N C+H+C
Sbjct: 1300 EASHCPSWQWQCLGLSVCVNLSALCDSTPDCPNGADESPVCNQLSCSENNAGCTHECIQG 1359
Query: 395 PRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
P GA C CP G N ++T C D +EC G C Q C N ++ C C GY L DG+
Sbjct: 1360 PFGAECLCPVGFLLGNDSRT-CEDINECDFPGFCSQHCHNMRGAFRCWCDAGYVLEGDGR 1418
Query: 452 SCTA 455
+C A
Sbjct: 1419 TCRA 1422
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 114/326 (34%), Positives = 152/326 (46%), Gaps = 41/326 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
LC PNE RC D DCS+ DE C Q +C G C S K
Sbjct: 111 LCIPNEYRC-------------DHVKDCSDEADERDCHYPTCE--QLTCANGACYNTSQK 155
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG +DC D SDE N C + C + QC + +CI +++CD DC DN+DE
Sbjct: 156 CDGKIDC-RDNSDEVN-CTNLCDRSEFQCN-NGECILRSFVCDRNNDCG-----DNSDEH 207
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C + + C + CIP +CD + DC + D + + HN C+P
Sbjct: 208 SCAYASCKSDEFTCP-NGNCIPQYQVCDGQDDCDDNGDEDGCESG--NQYRHN---CYPR 261
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGA 398
E C S QC+ L K CDG PDC GEDE G +CN C L C + C +P G
Sbjct: 262 EWACLESGQCIPLEKLCDGTPDCPGGEDETNIITGRYCNVSV-CPVLSCQYHCRSSPSGG 320
Query: 399 MCFCPAGQNPNKT---QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+C+CP G N + CVD DEC I G C Q C + + C C EGY L + +
Sbjct: 321 VCYCPEGYIVNGSDFRTCVDFDECQIWGICAQVCEDRIGHHQCHCAEGYVLEHQRQCKAS 380
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNG 481
+ Q AS+IFS+ D+ ++G
Sbjct: 381 TSSGQ---ASVIFSNGRDLLIGDIHG 403
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 147/334 (44%), Gaps = 40/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F CG G C+PE KC
Sbjct: 3750 CTESEFRC-DNQRCIPSRWICDHDNDCGDNSDERDCELKTCHPGYFQCGSGHCVPEQMKC 3808
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN-----WLCDEEMDCSTDDIVDN 279
DG DCL D SDE TC + NG A +C H W CD E DC D
Sbjct: 3809 DGIADCL-DVSDEA-TCPTRFPNGAYCPATMFECKNHVCTQLIWKCDGEDDCG-----DG 3861
Query: 280 TDEDWDKFHQCFN------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE+ H C N + +C + +CI + LC+ DC D TDE ++
Sbjct: 3862 SDEE---LHLCINVPCDSPSRFRCD-NNRCIYRHKLCNHVDDCG-----DGTDEREEQCR 3912
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCS 392
+ C +E +CGS C+ + CD DC + DE G + C C H C+
Sbjct: 3913 APTPRPCTEDEFKCGSG-HCIPQNYVCDNVDDCGDHFDEMGCNLGEQRSCAENLCQHNCT 3971
Query: 393 PTPRGA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR- 447
G +C C G N+ C D +EC G+C Q C NT SY C+C EG+
Sbjct: 3972 QLSEGGFICTCRPGYKASTLNRNLCQDINECEQFGTCAQDCHNTKGSYECACVEGFKSMG 4031
Query: 448 -PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P GK C A P ++ + IR+ +L+
Sbjct: 4032 DPYGKRCAA----DGNPPLLLLPDNIRIRKYNLS 4061
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 155/375 (41%), Gaps = 74/375 (19%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCI 218
A C +E RC +S +C+ +CD DC +G DE C C+ QF C G+CI
Sbjct: 2852 ANTCTDSEFRC-TSGRCIPSRWYCDQDQDCGDGSDEPASCEHHVRTCSSEQFMCDDGRCI 2910
Query: 219 PESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCA----LSKKCIPHNWLCDEEMDCS 272
+W CDG DC + D + N H C + + C S++CIP W+CD + DCS
Sbjct: 2911 SSNWICDGDNDCGDMSDEDERHNCENHTCASYEFFCVNSVPPSRRCIPQAWVCDGDADCS 2970
Query: 273 TDDIVDNTDEDWDKFHQCF----NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ +D+ H C +G + CI +++ CD DC D +DE
Sbjct: 2971 ---------DAYDELHNCTRRSCSGNEFACNNGLCIWNSYRCDLRNDCG-----DYSDER 3016
Query: 329 WDKYFS--------HNAV------------------------------LCHPNELRCGSS 350
Y NA+ C P+E +C +
Sbjct: 3017 NCTYLPCRDYEFTCQNALCIPKAYTCDGDNDCGDDSDELEHLCQTSEPTCPPHEFKCDNG 3076
Query: 351 NQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-- 407
N C+ + K C+ DC++ DE G N D C C+ T C C G
Sbjct: 3077 N-CIEMGKICNHLDDCTDNSDEKGCGINECNDPSISGCDQNCTDTQTSFYCSCRPGYKLM 3135
Query: 408 PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+K C D DEC + C Q C NT SY+C C GY PDGKSC + +
Sbjct: 3136 SDKRTCDDIDECKEMPSVCSQKCENTMGSYICKCARGYIREPDGKSCRQ---NSNITPYL 3192
Query: 467 IFSSTVDIRRIHLNG 481
IFS+ +R++ ++G
Sbjct: 3193 IFSNRYYLRKLAIDG 3207
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 110/226 (48%), Gaps = 19/226 (8%)
Query: 153 SVRVDGS-HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQF 210
++R+ G+ H +C + C S +C+ + CDG+ DC++G DE C C GQF
Sbjct: 3490 TLRLGGTTHCLPMCSSTQFLCDDSEKCIPIWWKCDGQRDCADGSDEPALCPQRYCRLGQF 3549
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEE 268
C G C + C+ DC DGSDE H C + QCA +K+CIP +W CD E
Sbjct: 3550 QCSDGNCTSSHFLCNAHQDC-PDGSDEDRILCENHWCAPNEWQCA-NKRCIPESWQCDSE 3607
Query: 269 MDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC +DN+DED C GQ +C+ + +CIP +W CD + DC D +D
Sbjct: 3608 NDC-----LDNSDEDSSHCTTRTCLPGQFRCS-NGRCIPQSWKCDYDNDCG-----DYSD 3656
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E + + + C ++ +CV C+G DC + DE
Sbjct: 3657 EPIQECMGPAYRCDNHTDFSCKTNYRCVPKWTMCNGFDDCRDNSDE 3702
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 103/203 (50%), Gaps = 27/203 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV S CDG DC + DE N+ C P F+C G+CIP W CD + DC EDG
Sbjct: 1029 RCVPNSYRCDGINDCHDNSDEQQCDTFNSTCAPSAFTCSSGQCIPLVWHCDKYNDC-EDG 1087
Query: 235 SDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQ 289
SDE N C Q C Q C + C+P +W+CD + DC D +DE + D
Sbjct: 1088 SDEQN-CPTQPPVSCAENQYTCD-NNLCVPRSWVCDTDNDCG-----DGSDEKNCDSAET 1140
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q QC +CI +++CD + DC+ D +DE D F+ C ++ +C S
Sbjct: 1141 CHITQFQCPY-HRCIDLSFVCDGDQDCA-----DGSDE-VDCVFN-----CTASQFKCAS 1188
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
+QC+ KFCDG DC + DE
Sbjct: 1189 GDQCINNVKFCDGVFDCRDHSDE 1211
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 171/440 (38%), Gaps = 108/440 (24%)
Query: 41 DEDWDKYFKRILNGT--HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D + D F LNG LA + N + CF +N + L + W A
Sbjct: 3279 DAELDGLFVSDLNGRFLRQLAEDCVDVNNTFCF---ENPRGIVLHPQYGHVYWTDWGHRA 3335
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+ + GM G N+S +++ I+WP+ + IDY D LYW D+HL +E ++G
Sbjct: 3336 --------YIGRIGMDGTNKSVIISTKIEWPNGITIDYTNDRLYWADAHLGYIEYSDLEG 3387
Query: 159 SH-----NAVLCHPNELRCGS--------SNQCVALSKFCDG--KPDCSNGED------- 196
H + +L HP + + + V DG K + N
Sbjct: 3388 HHRRTVYDGILPHPFAITIFEDTIYWTDWNTRSVEKGNKYDGSNKVELMNITHRPFDIHV 3447
Query: 197 ----EGPFCNAECTPGQFSCG---MGKCIPESWKC---DGFVDCLEDGSDEPNTCIHQCF 246
P + C C + K + + C D FV G+ C+ C
Sbjct: 3448 YHPYRQPIVDNPCGVNNGGCSHLCLIKAGGQGFTCECPDYFVTLRLGGTTH---CLPMCS 3504
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCST--------------------------------- 273
+ Q C S+KCIP W CD + DC+
Sbjct: 3505 STQFLCDDSEKCIPIWWKCDGQRDCADGSDEPALCPQRYCRLGQFQCSDGNCTSSHFLCN 3564
Query: 274 --DDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
D D +DED + H C + QCA +K+CIP +W CD E DC +DN+DED
Sbjct: 3565 AHQDCPDGSDEDRILCENHWCAPNEWQCA-NKRCIPESWQCDSENDC-----LDNSDED- 3617
Query: 330 DKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPF--CNNKA 380
SH C P + RC S+ +C+ S CD DC + DE GP C+N
Sbjct: 3618 ---SSHCTTRTCLPGQFRC-SNGRCIPQSWKCDYDNDCGDYSDEPIQECMGPAYRCDNHT 3673
Query: 381 DCENLKCSHKCSPTPRGAMC 400
D + K +++C P+ MC
Sbjct: 3674 DF-SCKTNYRC--VPKWTMC 3690
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 30/230 (13%)
Query: 156 VDGSHNAVLCHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQ 209
DGS LC R G S C + C+ DC +G DE N C P +
Sbjct: 3530 ADGSDEPALCPQRYCRLGQFQCSDGNCTSSHFLCNAHQDCPDGSDEDRILCENHWCAPNE 3589
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEE 268
+ C +CIPESW+CD DCL++ ++ + C + C GQ +C+ + +CIP +W CD +
Sbjct: 3590 WQCANKRCIPESWQCDSENDCLDNSDEDSSHCTTRTCLPGQFRCS-NGRCIPQSWKCDYD 3648
Query: 269 MDCSTDDIVDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
DC D +DE + ++C N C + +C+P +C+ DD D
Sbjct: 3649 NDCG-----DYSDEPIQECMGPAYRCDNHTDFSCKTNYRCVPKWTMCN-----GFDDCRD 3698
Query: 324 NTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DE+ + C P + RC +++ C+ L CDG+ DC + DE
Sbjct: 3699 NSDEE-----GCEEMTCDPLGDFRC-NNHHCIPLRWRCDGENDCGDHSDE 3742
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 110/254 (43%), Gaps = 62/254 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPESW 222
C PNE +C ++ +C+ S CD + DC + DE C C PGQF C G+CIP+SW
Sbjct: 3585 CAPNEWQC-ANKRCIPESWQCDSENDCLDNSDEDSSHCTTRTCLPGQFRCSNGRCIPQSW 3643
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQ--------CALSKKCIPHNWLCD-------- 266
KCD DC D SDEP I +C + C + +C+P +C+
Sbjct: 3644 KCDYDNDC-GDYSDEP---IQECMGPAYRCDNHTDFSCKTNYRCVPKWTMCNGFDDCRDN 3699
Query: 267 ------EEMDC---------------------STDDIVDNTDEDWDKFHQCFNGQVQCAL 299
EEM C +D D++DE+ +C + +C
Sbjct: 3700 SDEEGCEEMTCDPLGDFRCNNHHCIPLRWRCDGENDCGDHSDEENCVPRECTESEFRCD- 3758
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+++CIP W+CD + DC DN+DE CHP +CGS CV
Sbjct: 3759 NQRCIPSRWICDHDNDCG-----DNSDER-----DCELKTCHPGYFQCGSG-HCVPEQMK 3807
Query: 360 CDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3808 CDGIADCLDVSDEA 3821
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 90/193 (46%), Gaps = 22/193 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
GP EC F CG G CIP +W+CD DC +D +DE C G QC ++
Sbjct: 13 GPVPPHECDSQHFRCGNGVCIPIAWRCDRARDCSDD-TDEIGCPRQPCETGHFQCYITGV 71
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CIP +W+CDEE+DC D +DE C + Q+ C+ CIP+ + CD DC
Sbjct: 72 CIPQSWVCDEEIDCE-----DGSDEHQQCSGRTCSSHQMTCS-DGLCIPNEYRCDHVKDC 125
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
S D DE Y + + C ++ C S+ CDGK DC + DE C
Sbjct: 126 S-----DEADERDCHYPTCEQLTC--------ANGACYNTSQKCDGKIDCRDNSDE-VNC 171
Query: 377 NNKADCENLKCSH 389
N D +C++
Sbjct: 172 TNLCDRSEFQCNN 184
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 130/346 (37%), Gaps = 94/346 (27%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+R+E++ + G +R +V+ + P ++ + Y Q I YW D + +V + DGS V+
Sbjct: 2564 QRIERSSLTGMDREVIVSTTLH-PFAMTL-YGQYI-YWTDWYTKSVYRANKYDGSGQIVM 2620
Query: 165 C-----HPNELRCGS-------SNQCVAL----SKFCDGKPDCSN----GEDEGPFCN-- 202
P +R SN C S C P+ + E N
Sbjct: 2621 ITNLPTRPMGIRISGKSEQSQCSNPCSQFNGGCSHICAPGPNGAECQCPAEGRWYLANNN 2680
Query: 203 --------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
C +F+C G CIPE WKCD +C D SDE + H C C
Sbjct: 2681 KHCIVDNGTRCGVNEFTCLNGHCIPEEWKCDNDPEC-GDSSDEVESVCAFHTCPWTAFTC 2739
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF------------------------- 287
A + +C+ + + CD DC DN+DE F
Sbjct: 2740 A-NGRCVQYRYRCDHYNDCG-----DNSDEAGCLFRPCNTSTEFACNNGRCISLEYVCNG 2793
Query: 288 -----------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C +G +C + CIP +LCD + DC D +DE
Sbjct: 2794 INNCQDNGTSDERNCPDQTCQSGYTKCQSTNICIPRTYLCDGDNDCG-----DMSDES-S 2847
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
Y + N C +E RC +S +C+ +CD DC +G DE C
Sbjct: 2848 TYCAANT--CTDSEFRC-TSGRCIPSRWYCDQDQDCGDGSDEPASC 2890
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 120/311 (38%), Gaps = 65/311 (20%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL-- 164
++ +A G + P+V + WP+ L ID++ LYW D+ + +E+ DG L
Sbjct: 842 KIMRAWSDGSHALPIVNTTLGWPNGLAIDWSALRLYWADAFFDKIENSNFDGLDRRTLDR 901
Query: 165 ----CHPNELRCGSSNQCV-----------------ALSKFCDGKPD------------- 190
HP L AL+ F G +
Sbjct: 902 VEQMTHPFGLTISGEYAFFTDWRSNSIGRVRKTDGGALTIFRQGISNIMNVKMYDADTQT 961
Query: 191 ----CSNGEDEGPFCNAECTP---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
CS + C+ C P Q CG + S V C+ED S EP T
Sbjct: 962 GSNYCSRPANPNGDCSHFCFPVPNFQRVCGCPYGMSLS---SNHVTCVEDQSHEPPT--E 1016
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQ-CFNGQVQCALSK 301
QC C + +C+P+++ CD DC DN+DE D F+ C C+ S
Sbjct: 1017 QCGLYSFPCN-NGRCVPNSYRCDGINDCH-----DNSDEQQCDTFNSTCAPSAFTCS-SG 1069
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP W CD+ DC D +DE + V C N+ C +N CV S CD
Sbjct: 1070 QCIPLVWHCDKYNDCE-----DGSDE--QNCPTQPPVSCAENQYTC-DNNLCVPRSWVCD 1121
Query: 362 GKPDCSNGEDE 372
DC +G DE
Sbjct: 1122 TDNDCGDGSDE 1132
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 54/299 (18%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R +V ++ WP+ L +DY +++LYW D+ L +E + G V+
Sbjct: 2520 NAKIERATLGGNFRVSIVNSSLVWPNGLTLDYEEELLYWADASLQRIERSSLTGMDREVI 2579
Query: 165 C----HPNEL---------------------RCGSSNQCVALSKFCDGKPDCS-NGEDEG 198
HP + + S Q V ++ +G+ E
Sbjct: 2580 VSTTLHPFAMTLYGQYIYWTDWYTKSVYRANKYDGSGQIVMITNLPTRPMGIRISGKSEQ 2639
Query: 199 PFCNAECTPGQFSCGMGKCI---PESWKCDGFVDCLEDGSDEPNTCI----HQCFNGQVQ 251
C+ C+ QF+ G P +C + ++ CI +C +
Sbjct: 2640 SQCSNPCS--QFNGGCSHICAPGPNGAECQCPAEGRWYLANNNKHCIVDNGTRCGVNEFT 2697
Query: 252 CALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
C L+ CIP W CD + +C S+D++ E FH C CA + +C+ + +
Sbjct: 2698 C-LNGHCIPEEWKCDNDPECGDSSDEV-----ESVCAFHTCPWTAFTCA-NGRCVQYRYR 2750
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
CD DC DN+DE + N E C ++ +C++L C+G +C +
Sbjct: 2751 CDHYNDCG-----DNSDEAGCLFRPCNT----STEFAC-NNGRCISLEYVCNGINNCQD 2799
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 21/119 (17%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPA-----PEIFPL-------DERLEKAGM 113
I + + R+ A+++ W D PA P++ L + ++E + M
Sbjct: 4147 IYWSDARTKRIEVAKLDGRYRKWLISTELDQPAAIVVNPKLGLLYWTDWGRESKIECSWM 4206
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
G++R LV++++ WP+ L IDY N D +YW DS N VES++ DG+ V+ NE R
Sbjct: 4207 DGQHRQILVSEDLGWPTGLSIDYLNNDRIYWSDSKENVVESIKYDGTDRRVI--SNEAR 4263
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G R+ +V I WP+ L IDY+ ++Y+ D++L+ ++ +G H
Sbjct: 1570 RIERASMDGSMRTVIVQDKIYWPNGLTIDYSNRLIYFTDAYLDYIDFCDYNGHHRRQVIA 1629
Query: 161 -NAVLCHPNEL 170
+ +L HP+ +
Sbjct: 1630 SDLILQHPHGI 1640
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+E+A M G R+ LV + WP+ + +D +YW D+ + +E++ DG + H
Sbjct: 530 VERAFMDGTARTSLVKSKLGWPAGITLDMVSKRVYWVDARFDYIETITYDGLQRKTVVHG 589
Query: 168 NEL 170
L
Sbjct: 590 GSL 592
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 36 IVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCF--IQQQNVSSVRLRCAQINDLLNS 93
+ DN + + NG+H +A++F+ + + + + Q + S +L+S
Sbjct: 1439 VADNITSQIHNIYPLVQNGSHIVAVDFDSISGRIFWSDVTQDKIWSAFQNGTDRKVVLDS 1498
Query: 94 ---------WDLPAPEIFPLDERLE---KAGMHGENRSPLVTKNIQWPSSLVIDYNQD-- 139
D ++ D LE + M G R+ L++KNI P L +D D
Sbjct: 1499 GITMTESIAIDWVGRNLYWTDSALETILASKMDGSYRTVLISKNITNPRGLALDPRIDDH 1558
Query: 140 ILYWCD-SHLNTVESVRVDGSHNAVLCH-----PNELRCGSSNQCVALS 182
+L+W D H +E +DGS V+ PN L SN+ + +
Sbjct: 1559 LLFWSDWGHHPRIERASMDGSMRTVIVQDKIYWPNGLTIDYSNRLIYFT 1607
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ + P G + Q + C + + G C+Q C +H
Sbjct: 620 NKFTETNPQVYYRSTLRPYGVTIYHSLRQRKAENPCGNNN-----GGCEQVCVISHILDN 674
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L Y C CT G+ L D + C AV ++FSS V IR I
Sbjct: 675 DGLGYRCKCTLGFDLAEDNRHCVAVK------QFLLFSSQVAIRGI 714
>gi|347963802|ref|XP_310672.5| AGAP000427-PA [Anopheles gambiae str. PEST]
gi|333467028|gb|EAA06264.6| AGAP000427-PA [Anopheles gambiae str. PEST]
Length = 1907
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 152/346 (43%), Gaps = 46/346 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--------------ECTPGQF 210
C RC +S QCV S CDG PDC + DE C C G+F
Sbjct: 1137 CAAGMFRC-NSGQCVPGSWECDGSPDCHDASDEHESCQPAEKKQEEGKGKEQERCGEGRF 1195
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPN----------TCIHQCF-NGQV-QCALSKKC 258
CG+G CI + CDG DC DG+DE + C Q NG +CA S C
Sbjct: 1196 RCGVGFCISSALVCDGNDDC-GDGTDEEHCVGRIGATAAQCSEQAIANGTAYRCARSGAC 1254
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+P C+ +C ED C + QC+ +CI W CD + DC
Sbjct: 1255 LPAAARCNGTAECPHG-------EDETGCSNCGLREFQCS-DGQCIRQEWRCDHDQDCDD 1306
Query: 319 DDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
N D +H +A+ C + CG +C+ ++K CDG+ DC+NG DE C
Sbjct: 1307 GSDERNCTAGADGSTAHTHAIDCGRDTFECGP-GECIPVAKLCDGRRDCTNGHDEEGACA 1365
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLS 435
+ C+ C +P G++C C G ++ C D +EC C Q C N H S
Sbjct: 1366 SACTGGLGPCAQICQKSPAGSICACLEGYELAGDRKTCTDVNECARGQPCAQQCANVHGS 1425
Query: 436 YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD-IRRIHLN 480
Y C+C +G+ LRPD SC +V PA + + +D +R++ L
Sbjct: 1426 YRCACHDGFMLRPDKASCKSVG-----PAPHLLYTALDQVRQLTLQ 1466
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 142/327 (43%), Gaps = 71/327 (21%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGKCIP 219
P RC + C++ S CDG+ DC G+DE P C+ +F+C CIP
Sbjct: 128 PFWYRCRHESTCISGSSRCDGQRDCLGGDDEENCDNYEVPHRAPLCSKAEFTCTDRACIP 187
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG CL DGSDE CI ++ KC +LC
Sbjct: 188 ADLVCDGVQHCL-DGSDETIGCID----------IAGKC--KGFLCR------------- 221
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCI-PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+K C+ H+W+CD DD D +DE+ +
Sbjct: 222 --------------------NKHCLQSHHWVCD-----GLDDCGDGSDEE---HCLSECT 253
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD-CENLKCS-HKCSPTPR 396
L H + C +++ CV +++ C+G DC +G DEGP C AD C+ L C+ C P
Sbjct: 254 LEH-GKYECANNHTCVDVTQVCNGADDCGDGSDEGPGCKVPADGCKALHCAPQTCKVLPD 312
Query: 397 GA-MCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G +C C G P+ +CVD +EC G C Q C NT S+ C+C + + L DG++C
Sbjct: 313 GKPVCLCGVGFRFEPSAGRCVDVNECARYGLCSQGCINTPGSFRCTCIDQFHLMRDGRTC 372
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ A +++++ + ++L
Sbjct: 373 ---ELSSGTEALMLYTTQKAVGAMYLT 396
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 141/381 (37%), Gaps = 86/381 (22%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----EGPFCNAECTPGQF 210
+ G C NE RC ++C+A + CD +PDC++ D EG CT QF
Sbjct: 1035 KTPGGAGTTGCRWNEFRCADGSRCIAATSRCDSRPDCADRSDEANCEGYNRRTNCTRYQF 1094
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPN---------TCIHQCFNGQVQCALSKKCIPH 261
SC G C+ + +CD DC DGSDE C G +C S +C+P
Sbjct: 1095 SCADGFCVDATARCDQVPDC-PDGSDEQECAGVGGKGGVAATTCAAGMFRCN-SGQCVPG 1152
Query: 262 NWLCDEEMDC--STDD-----IVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDE 312
+W CD DC ++D+ + E+ Q C G+ +C + CI +CD
Sbjct: 1153 SWECDGSPDCHDASDEHESCQPAEKKQEEGKGKEQERCGEGRFRCGVG-FCISSALVCDG 1211
Query: 313 EMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNEL------RCGSSNQCVALSKFCDGKPD 365
DC D TDE+ A C + RC S C+ + C+G +
Sbjct: 1212 NDDCG-----DGTDEEHCVGRIGATAAQCSEQAIANGTAYRCARSGACLPAAARCNGTAE 1266
Query: 366 CSNGEDEGP---------------------FCNNKADCENLKCSHKCSPTPRGAMCFCPA 404
C +GEDE C++ DC++ C+ G+ A
Sbjct: 1267 CPHGEDETGCSNCGLREFQCSDGQCIRQEWRCDHDQDCDDGSDERNCTAGADGSTAHTHA 1326
Query: 405 GQNPNKTQCVDADEC-----LIDGS-----------------------CDQTCTNTHLSY 436
T EC L DG C Q C +
Sbjct: 1327 IDCGRDTFECGPGECIPVAKLCDGRRDCTNGHDEEGACASACTGGLGPCAQICQKSPAGS 1386
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
+C+C EGY L D K+CT VN
Sbjct: 1387 ICACLEGYELAGDRKTCTDVN 1407
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 116/308 (37%), Gaps = 43/308 (13%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMG-KCIPE 220
RC +S +C+A C+G+ DC + DE G C +F C G +CI
Sbjct: 1003 FRC-ASGECLARGLRCNGRVDCMDQSDEQGCESKTPGGAGTTGCRWNEFRCADGSRCIAA 1061
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ +CD DC D SDE N + C Q CA C+ CD+ DC
Sbjct: 1062 TSRCDSRPDC-ADRSDEANCEGYNRRTNCTRYQFSCA-DGFCVDATARCDQVPDCP---- 1115
Query: 277 VDNTDED---------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN--- 324
D +DE C G +C S +C+P +W CD DC D D
Sbjct: 1116 -DGSDEQECAGVGGKGGVAATTCAAGMFRCN-SGQCVPGSWECDGSPDCH--DASDEHES 1171
Query: 325 ---TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++ ++ C RCG C++ + CDG DC +G DE C +
Sbjct: 1172 CQPAEKKQEEGKGKEQERCGEGRFRCGVGF-CISSALVCDGNDDCGDGTDE-EHCVGRIG 1229
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
+CS + C P +C EC G + C+N L C+
Sbjct: 1230 ATAAQCSEQAIANGTAYRCARSGACLPAAARCNGTAEC-PHGEDETGCSNCGLREF-QCS 1287
Query: 442 EGYTLRPD 449
+G +R +
Sbjct: 1288 DGQCIRQE 1295
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 115/321 (35%), Gaps = 70/321 (21%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI--------LYWCDSHLNTVESVRVDG 158
R+E G+ R L + ++ P SL I ++ LYW D H N + R+
Sbjct: 873 RIEITSFEGDTRH-LFREYLREPVSLAIIGSELFWTCRGSQRLYWSDKH-NVGATKRISV 930
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG---------- 208
L P+E+ +A S+ +PD G C+ C G
Sbjct: 931 QLPPDLAVPDEMP-------IAASQPTTRRPDHPCTRSNGG-CSHICVAGGLYTSACVCP 982
Query: 209 -------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEP--------NTC 241
F C G+C+ +C+G VDC+ D SDE
Sbjct: 983 TGMVFNTTLARVCIDAAACAFRCASGECLARGLRCNGRVDCM-DQSDEQGCESKTPGGAG 1041
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKFHQCFNGQVQCALS 300
C + +CA +CI CD DC+ D D + E +++ C Q CA
Sbjct: 1042 TTGCRWNEFRCADGSRCIAATSRCDSRPDCA--DRSDEANCEGYNRRTNCTRYQFSCA-D 1098
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDED----WDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C+ CD+ DC D +DE A C RC +S QCV
Sbjct: 1099 GFCVDATARCDQVPDCP-----DGSDEQECAGVGGKGGVAATTCAAGMFRC-NSGQCVPG 1152
Query: 357 SKFCDGKPDCSNGEDEGPFCN 377
S CDG PDC + DE C
Sbjct: 1153 SWECDGSPDCHDASDEHESCQ 1173
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A M G + +V+ I WP+ L +D+ LYW D+ L +ES+ DG+ V+
Sbjct: 519 IGRARMDGTEQQVVVSDGIHWPNGLTLDWPNQRLYWIDAKLKRIESMHFDGTDRVVV 575
>gi|308736974|ref|NP_001184180.1| vitellogenin receptor precursor [Bombyx mori]
gi|302138009|gb|ADK94452.1| vitellogenin receptor [Bombyx mori]
Length = 1809
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 106/340 (31%), Positives = 158/340 (46%), Gaps = 35/340 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ + C E C +S C+ + CDG DC++ DE + C PG + C +CI
Sbjct: 1051 DTLACFDTEFMC-ASGSCILKTWKCDGDQDCNDASDEIDCESVSCKPGYYQCRDRECIEL 1109
Query: 221 SWKCDGFVDCL----EDGSDEPNTC----IHQCFNGQVQCALSKK-CIPHNWLCDEEMDC 271
+CDG DC E+ DEP IH+C + C ++ C+P C+ + DC
Sbjct: 1110 KKRCDGHQDCFDYSDEEECDEPVVVEEPKIHRCAEREYSCERNRSICLPITARCNMKTDC 1169
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--- 328
T+E + +G C +C+ N +CD +C DD D T +
Sbjct: 1170 P-----GGTNEIGCDYRCTPHGMFGCKQQIRCLAMNRVCDGNKEC--DDGSDETPDACAL 1222
Query: 329 WDKYFSHNAVLCHP-----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
++ V+ +P + CG + QC+ ++ CD P+C +G DE C + C+
Sbjct: 1223 VNRTSHLYPVMLYPAAECRDGFLCG-NGQCIEWAEVCDRTPNCFDGSDESIHCFSA--CD 1279
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
N C+H C TP G C CPAG + P++ C D DEC G C Q C NT S++CSC
Sbjct: 1280 NNTCAHACQATPLGPRCLCPAGYSAAPDRRTCADVDECRA-GLCSQACVNTPGSFLCSCH 1338
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
GY LR D +SC AV SI++ S +R + +G
Sbjct: 1339 HGYALRSDRRSCKAVT----GNMSILYVSGNTVRSVSADG 1374
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-------QCALSKKCIPHN 262
F C G CI +S CDG VDC +DG+DE N C+ + Q C SKKCIP++
Sbjct: 36 FPCMSGGCIQQSQYCDGKVDC-DDGTDE-NYCLDHKPDAQFCNETHQFMCRDSKKCIPNH 93
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDD 320
W+C+ ++DC D +DE G+ + L KCI WLCD DC
Sbjct: 94 WICNNDIDCD-----DGSDELNCTLVPVATGKCKGFLCGDGKCISSLWLCDGSYDCKDKS 148
Query: 321 IVDNTDEDWDKYFSHNAV--------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + SH+ + L + +C S+ C+ CDG DC +G DE
Sbjct: 149 DENSPENCRHSLLSHSMLSGSDCQEWLGGRRQYKCTDSSFCLPSEMMCDGMQDCKDGSDE 208
Query: 373 GPFCNN-KADCENLKC---SHKCSPTPRGAMCFC-----PAGQNPNKTQCVDADEC-LID 422
PFC N C N C C P G C C N + C D DEC L
Sbjct: 209 RPFCANWHTMCANHTCLGDKASCVPDRAGPTCECLNHLNLRRYNTSTGACDDIDECALAR 268
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C C N + C C +GY C A P ++F ST
Sbjct: 269 PQCSHYCVNADGHFSCECADGYFKDELKYLCYATG-----PEPLLFYST 312
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 76/192 (39%), Gaps = 44/192 (22%)
Query: 143 WCDSHLN----TVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+CD ++ T E+ +D +A C+ ++ C S +C+ C+ DC +G DE
Sbjct: 49 YCDGKVDCDDGTDENYCLDHKPDAQFCNETHQFMCRDSKKCIPNHWICNNDIDCDDGSDE 108
Query: 198 -----GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFN--- 247
P +C F CG GKCI W CDG DC +D SDE P C H +
Sbjct: 109 LNCTLVPVATGKCK--GFLCGDGKCISSLWLCDGSYDC-KDKSDENSPENCRHSLLSHSM 165
Query: 248 -------------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKF-- 287
Q +C S C+P +CD DC D +DE +W
Sbjct: 166 LSGSDCQEWLGGRRQYKCTDSSFCLPSEMMCDGMQDCK-----DGSDERPFCANWHTMCA 220
Query: 288 -HQCFNGQVQCA 298
H C + C
Sbjct: 221 NHTCLGDKASCV 232
>gi|301625410|ref|XP_002941898.1| PREDICTED: low-density lipoprotein receptor-related protein 4,
partial [Xenopus (Silurana) tropicalis]
Length = 1828
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 159/325 (48%), Gaps = 36/325 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWK 223
C +E C + C+ CDG DC + DE C+ +C+ +F C G CI E W
Sbjct: 83 CEEDEFSC-QNGYCIRSLWHCDGDNDCGDNSDEQ--CDMRKCSEKEFGCADGSCIAEHWF 139
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC +DGSDE + HQ C +G+ C S CI W CD + DC D +DE
Sbjct: 140 CDGDTDC-KDGSDEESCPSHQPCRSGEFMCN-SGLCINSGWRCDGDSDCD-----DQSDE 192
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLCH 341
C + Q +C+ S +C+ +W CD E DCS DN+DE +K S C
Sbjct: 193 KNCTTSVCTSDQFRCS-SGRCVRLSWRCDGEDDCS-----DNSDERGCEKTGSPQ---CA 243
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADC--ENLKCSHKCSPT 394
++ C S+ +C+ K C+G DC +G DE P N + +C +N C KC
Sbjct: 244 QDQFLC-SNGRCIGQRKLCNGVNDCGDGSDESPHQNCRPRTGEENCNHQNGGCEQKCQTV 302
Query: 395 PRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
C C G + C D DEC +G C Q C+N+ + C C GY LRPD +S
Sbjct: 303 RGLVQCTCQTGYRLRDDGRTCQDVDECAEEGYCSQGCSNSQGGFQCWCEAGYQLRPDKRS 362
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRI 477
C A+ EP ++F++ +DIR++
Sbjct: 363 CKALG---PEPV-LLFANRIDIRQV 383
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 39/58 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY + LYW D+ + T+ES +++G+ VL
Sbjct: 813 KIERAGMDASSRLVIISSNLTWPNGLAIDYESERLYWADAGMKTIESAKLNGADRMVL 870
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLN-SWDLP-APEIFPLD---- 105
L T LA+++ RN + + RL L+N S D P A +FP
Sbjct: 1357 LKTTDGLAVDWVARNLYWTDTGRNTIEVSRLDGRHRKVLVNNSLDEPRAIAVFPRKGFLF 1416
Query: 106 -------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A + G +R ++ ++ WP+ L +DY+ +YW D+HL+ +E+ ++G
Sbjct: 1417 WTDWGQVAKIERAHLDGSDRRTIINTDLGWPNGLTLDYDSRRIYWVDAHLDRIENADLNG 1476
Query: 159 SHNAVLC----HPNEL 170
VL HP L
Sbjct: 1477 KMRHVLISQVSHPFAL 1492
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G R L++ N+ WP+ L +D L W D+H +E+ + G + +L
Sbjct: 1121 KLERAGMDGSERMVLISLNLGWPNGLAVDKAGSQLLWADAHTERIEASDLMGRNRRILVS 1180
Query: 167 P 167
P
Sbjct: 1181 P 1181
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D L+W DS + +E +DGSH VL
Sbjct: 420 DRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLFWTDSGTSRIEVSNLDGSHRKVLL 479
Query: 166 HPN 168
N
Sbjct: 480 WNN 482
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DGS+ +
Sbjct: 508 RIEYSSMDGSNRRVIADTHLFWPNGLTIDYAGHRIYWVDAKHHVIERADLDGSNRKAV 565
>gi|357627556|gb|EHJ77209.1| putative low-density lipoprotein receptor [Danaus plexippus]
Length = 1915
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 168/413 (40%), Gaps = 121/413 (29%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESW 222
H N C ++ C+A+ CDG DC + DE G N CT QF CG G CI + W
Sbjct: 166 HDNRTICLNTRVCIAIEWICDGDNDCDDFSDETHCGGVTN--CTSDQFQCGNGLCIDKDW 223
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC D SDE + +C + Q C L+ +C+ +W CD+E DC DN+DE
Sbjct: 224 VCDGADDC-RDNSDEIHCPKGKCRDNQFTC-LTGECLALHWRCDKEADCP-----DNSDE 276
Query: 283 DW--DKFHQCFNGQVQCALSK--------------------------------------- 301
+ QC ++QC K
Sbjct: 277 SECPVELLQCGENEIQCNNKKCVRKDFQCDGDNDCGDWTDEDSCPVLPGSCSSSEYKCKD 336
Query: 302 -KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS---HNAVLCHPNELRCGSSNQCVALS 357
KCIP W CD E DC ED D S H C +E C +C++ +
Sbjct: 337 GKCIPERWKCDAERDC----------EDGDDEVSCEPHGVRNCTVDEYTC-IDRRCISKT 385
Query: 358 KFCDGKPDCSNGEDE---GPFC-------------------NNKADCENLK--------- 386
CDG DCSNGEDE FC N K C+ +K
Sbjct: 386 WLCDGLRDCSNGEDELNCEVFCEKDQYMCKSIKSDAFRNCVNRKHVCDGMKDCPQGDDEE 445
Query: 387 -------------CSHKCSPTPRG-AMCFCPAGQ--NPNKTQCVDADECLI--DGSCDQT 428
C +C T G C CP G + N C D DEC+ D C QT
Sbjct: 446 KCPTKRKCRPDDKCERQCITTFDGFPACACPIGYLLDNNGYSCQDIDECMYEQDPVCSQT 505
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C+NT SY+C C GY LRPD +SC A E +++FS+ V IR++ L G
Sbjct: 506 CSNTLGSYMCGCMTGYVLRPDARSCKATG----ESPTLLFSNGVGIRQVWLTG 554
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 10/106 (9%)
Query: 70 CFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWP 129
+ +V R D L W P + ++E+A M G+NR ++ NI WP
Sbjct: 643 AVLAASDVDKPRAIAVHPGDALVFWTDWGP-----NPKIERANMDGDNRKSIIVHNIFWP 697
Query: 130 SSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NAVLCHPNEL 170
+ L IDY + +YW D+ + +E +G N L HP L
Sbjct: 698 NGLTIDYTESTIYWADAKHHVIEKASFNGLDRKRIINKGLPHPFAL 743
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A M G+NR +V NI+WP+ L ID + LYW D+ + T+ES +G L
Sbjct: 1288 KIERADMDGKNRRIIVDNNIKWPNGLAIDRIESRLYWNDAKVLTIESSNFNGHDRRTL 1345
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 30/119 (25%)
Query: 48 FKRILNGTH-TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
+ IL G H +AL++ H ++L F + N+ +R + PLD
Sbjct: 557 YMSILKGLHKAMALDY-HYKKNLVFWTENNMRVIR-------------------VAPLDS 596
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
N + +V I+ P L +D+ D+L+W DS VE +DGS AVL
Sbjct: 597 ---------NNMTDVVRWGIETPGGLAVDWIHDLLFWTDSGTRRVEVATLDGSQRAVLA 646
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+A M G NR L+ ++ WP+ L +D +YW D T+E +DG+ VL
Sbjct: 984 IERADMDGGNRQRLIFGDMTWPNGLALDLPNKRIYWTDGGNRTIEYANLDGTGRTVL 1040
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD + IF D + + KA ++G +++ +V N+ P+ L D+ + LYW D+ N
Sbjct: 880 WDHNSNSIFWTDVEKDTINKAFLNGSHQTIIVGSNLISPAGLAYDWLTNKLYWTDAGTNR 939
Query: 151 VESVRVDGSHNAVLCHPN 168
+E +GS +L N
Sbjct: 940 IEVANANGSMRTLLAWEN 957
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+A + G R +V ++ +P+ + IDY LYW D+ + +++ ++G H L
Sbjct: 1596 IERASLDGSQRRIIVNHDLGFPNGITIDYKDRRLYWTDALKDRIDTSDLNGQHRVQL 1652
>gi|334329949|ref|XP_001375493.2| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 2 [Monodelphis domestica]
Length = 4607
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 148/343 (43%), Gaps = 74/343 (21%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPESWKC 224
P L +NQC+ CD DC +G DE CN C PGQF C +CI + C
Sbjct: 1050 PESLYTCDNNQCIPRIWLCDTDNDCGDGSDEKN-CNFTGTCDPGQFQCPDHRCIDPFYVC 1108
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DG+DE + CI+ C + +CA +CI + + CD DC+ D++DE
Sbjct: 1109 DGDRDC-ADGADEVD-CIYNCTASEFKCASGDQCISNIYHCDGVFDCN-----DHSDEAG 1161
Query: 285 ---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-- 339
C + QC CIP+NW CD DC +D +DE HN L
Sbjct: 1162 CPTRPPGMCHQNEFQCQSDGTCIPNNWECDGHPDC-----MDGSDE-------HNGCLPM 1209
Query: 340 -CHPNELRCGSSN-----------------------------------------QCVALS 357
C P+ RC + N CV LS
Sbjct: 1210 TCPPSLFRCDNGNCIYRAWICDGDNDCRDMSDERDCPTQPFRCPSWQWQCPGHSICVNLS 1269
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
CD PDC NG DE P CN ++ + N C+H+C P GA C CP G N +KT C
Sbjct: 1270 AVCDDIPDCPNGADESPVCNQESCTDNNAGCTHECIQGPFGAQCLCPFGYQLTNDSKT-C 1328
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
D +EC G C Q C N S C C EGY L +GK+C
Sbjct: 1329 EDINECETPGFCSQHCFNERGSSRCWCDEGYILEGNGKTCKVA 1371
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 111/329 (33%), Positives = 159/329 (48%), Gaps = 40/329 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C ++ C + QC+ CD DC +G DE P C Q +C G C
Sbjct: 93 CSSQQMTC-PNGQCIPNEYRCDRVRDCPDGADERGCQYPVCE------QLTCANGACYNT 145
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ +CDG +DC D SDE N C +C N Q QCA + +CIP +++CD + DC D +
Sbjct: 146 NQQCDGKIDC-RDSSDEVN-CTQRCLNSQFQCA-NGECIPRSFVCDHDDDCG-----DRS 197
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C C S +CI +W+CD + DC ++ + + + C
Sbjct: 198 DEHDCNYQTCRGNFFTCP-SGRCIHQSWVCDGDDDCEDNEDENGCESGHHE--------C 248
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
+P E C S C+ + K CDG DC G DE G C N + C L C H+C +P
Sbjct: 249 YPGEWACPGSGHCIPIEKLCDGTSDCPFGGDETNVTAGRHC-NISQCATLSCQHRCHSSP 307
Query: 396 RGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G +C+CP G N N ++ CVD D+C + G CDQ C + + C C EGY L +
Sbjct: 308 TGGICYCPQGYIINSNDSRTCVDFDDCKMWGVCDQLCEDRIGHHQCHCVEGYVLE-QHRH 366
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C A N+ AS+IFS+ D+ ++G
Sbjct: 367 CRA-NISSGV-ASLIFSNGRDLLIGDIHG 393
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 156/368 (42%), Gaps = 60/368 (16%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
++ C NE RC +S +C+ +CD DC++G DE P C + C+ QF C G+CI
Sbjct: 2800 SLTCTSNEFRC-TSGRCIPAHWYCDQGVDCADGSDEPPSCVSHVRTCSVDQFRCDDGRCI 2858
Query: 219 PESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
P +W CDG DC + D N C + C ++ +CIP W+CD + DCS
Sbjct: 2859 PNTWICDGDNDCGDMSDEDQRHNCAARNCTRSEFTCVNNRPPLRRCIPRAWICDGDADCS 2918
Query: 273 T-----------------------------------DDIVDNTDEDWDKFHQCFNGQVQC 297
+D D++DE + C Q C
Sbjct: 2919 DAYDEHQNCTRRNCTENEFTCANGLCIRNSYRCDRHNDCGDSSDERGCVYPPCQQYQFTC 2978
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI +LCD + DC D +DE + + C P++ +C + N C+ +
Sbjct: 2979 Q-NGQCISKVYLCDGDNDCG-----DLSDE-LEHLCTTPEATCPPHQFKCDNGN-CIEMM 3030
Query: 358 KFCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
+ C+ DC + DE G N D C H C+ T C C G +K C
Sbjct: 3031 QICNHLDDCGDNSDEKGCGINECNDPSISGCDHNCTDTRTSFYCTCLPGYKLMSDKKTCD 3090
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC S C Q C NT SY+C C GY PDGK C + +IFS+
Sbjct: 3091 DVDECNETPSVCSQMCENTAGSYICKCARGYIREPDGKRCRQ---NSNISPYLIFSNRYY 3147
Query: 474 IRRIHLNG 481
+R + +G
Sbjct: 3148 LRNLTADG 3155
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 105/330 (31%), Positives = 150/330 (45%), Gaps = 32/330 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ CD DC + DE C PG F C G C+PE +KC
Sbjct: 3698 CSESEFRC-DNQRCIPSRWICDHDNDCEDNSDERDCELRTCHPGYFQCTSGHCVPEQFKC 3756
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D SDE TC + NG A +C H +C + + D D D
Sbjct: 3757 DGSADCL-DFSDEA-TCPTRYPNGTYCSATMFECKNH--VCIQPL-WKCDGDDDCGDSSD 3811
Query: 285 DKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
++ H C + + +C + +CI + LC++E DC D +DE + +
Sbjct: 3812 EELHLCLDNPCNPPFRFRCE-NNRCIYSHELCNQEDDCG-----DGSDEKPEHCMNSTTK 3865
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKCSHKCSPTPR 396
C +E +CG+ C+ LS CD DC N DE CN A+ C+ C H C+
Sbjct: 3866 PCVEDEFKCGNG-HCIPLSYVCDNFDDCGNHFDETG-CNPGAERTCDENICEHNCTHLKE 3923
Query: 397 GA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--G 450
G +C C G + ++ CVD +EC G C Q C N+ SY C C +G+ D G
Sbjct: 3924 GGFICSCRPGYSAGPVDRNSCVDINECEQFGVCPQDCKNSKGSYECICADGFRSVGDHEG 3983
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
K C A P ++ V IR+ +L+
Sbjct: 3984 KQCAA----DGNPPILLLPDNVRIRKYNLS 4009
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 108/220 (49%), Gaps = 18/220 (8%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGK 216
+H +C + C S +C+ +S CDG+ DC +G DE C C GQF C G
Sbjct: 3444 ATHCLPMCSSTQFLCADSERCIPISWKCDGQRDCRDGSDEPSTCPQRYCQIGQFQCNDGN 3503
Query: 217 CIPESWKCDGFVDCLEDGSDEPNT-CI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
C + C+ DC DGSDE + C+ HQC Q QCA +K+CIP W CD E DC
Sbjct: 3504 CTNPHFLCNAVRDC-PDGSDEEHVLCVNHQCEIHQWQCA-NKRCIPEAWQCDTEDDCG-- 3559
Query: 275 DIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DN+DED C GQ +C + +CIP +W CD + DC D++DE +
Sbjct: 3560 ---DNSDEDSAHCASRTCLPGQFKCD-NGRCIPQSWKCDVDNDCG-----DHSDEPIHEC 3610
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + + C ++ +C+ C+G DC + DE
Sbjct: 3611 MGPDYRCNNHTDFSCKTNYRCIPQWAVCNGYDDCRDNSDE 3650
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/226 (34%), Positives = 105/226 (46%), Gaps = 45/226 (19%)
Query: 167 PNELRCGS------SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCI 218
P L+CGS + +CV CDG DC + DE N C F+C G+CI
Sbjct: 961 PPTLQCGSYSFSCNNGRCVPRYYRCDGVDDCHDNSDEQHCGTPNNTCAASAFTCAHGQCI 1020
Query: 219 PESWKCDGFVDCLEDGSDE-------PNTC---IHQCFNGQVQCALSKKCIPHNWLCDEE 268
P W+CD DCL DGSDE P++C ++ C N Q CIP WLCD +
Sbjct: 1021 PGRWRCDRHNDCL-DGSDEEHCPTPGPSSCPESLYTCDNNQ--------CIPRIWLCDTD 1071
Query: 269 MDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC D +DE F C GQ QC +CI ++CD + DC+ D D D
Sbjct: 1072 NDCG-----DGSDEKNCNFTGTCDPGQFQCP-DHRCIDPFYVCDGDRDCA--DGADEVDC 1123
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
++ C +E +C S +QC++ CDG DC++ DE
Sbjct: 1124 IYN---------CTASEFKCASGDQCISNIYHCDGVFDCNDHSDEA 1160
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 143/363 (39%), Gaps = 91/363 (25%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ + GM G N++ +++ + WP+ + IDY D LYW D+HL+ +E ++G H +
Sbjct: 3285 IGRVGMDGTNKTVIISTKLAWPNGITIDYTNDKLYWSDAHLSYIEFSDLEGRHRHTVLDG 3344
Query: 163 VLCHPNEL---------------------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
L HP + + S + V ++ P
Sbjct: 3345 TLPHPFAITIFEDTLFWTDWNTRTVEKGNKYNGSGRMVLVNTTHRPFDIHVYHPYRQPIV 3404
Query: 202 NAECTPGQFSCG---MGKCIPESWKC---DGFVDCLEDGSDEPNTCIHQCFNGQVQCALS 255
N C C + K + + C D F L+ GS C+ C + Q CA S
Sbjct: 3405 NNPCGTNNGGCSHLCLIKAGGQGFTCECPDNF-QTLQIGS--ATHCLPMCSSTQFLCADS 3461
Query: 256 KKCIPHNWLCDEEMDC-----------------------------------STDDIVDNT 280
++CIP +W CD + DC + D D +
Sbjct: 3462 ERCIPISWKCDGQRDCRDGSDEPSTCPQRYCQIGQFQCNDGNCTNPHFLCNAVRDCPDGS 3521
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ HQC Q QCA +K+CIP W CD E DC DN+DED S
Sbjct: 3522 DEEHVLCVNHQCEIHQWQCA-NKRCIPEAWQCDTEDDCG-----DNSDEDSAHCASRT-- 3573
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GP--FCNNKADCENLKCSHK 390
C P + +C + +C+ S CD DC + DE GP CNN D + K +++
Sbjct: 3574 -CLPGQFKC-DNGRCIPQSWKCDVDNDCGDHSDEPIHECMGPDYRCNNHTDF-SCKTNYR 3630
Query: 391 CSP 393
C P
Sbjct: 3631 CIP 3633
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 15/202 (7%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C++ CD DC +G DE A C P F+CG G+C+P ++CD + DC D
Sbjct: 2650 RCISERWKCDNDNDCGDGSDELESVCAFHTCQPTAFTCGNGRCVPYHYRCDHYNDC-GDN 2708
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CI ++C+ +C + TDE C +G
Sbjct: 2709 SDEAGCLFRTCDSNTEFACNNGRCISLEYVCNGINNCYDN---GTTDERNCPDRTCQSGF 2765
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + CIP +LCD + DC D +DE S + C NE RC +S +C+
Sbjct: 2766 TKCQNTNICIPRTYLCDGDNDCG-----DMSDESPTHCVS---LTCTSNEFRC-TSGRCI 2816
Query: 355 ALSKFCDGKPDCSNGEDEGPFC 376
+CD DC++G DE P C
Sbjct: 2817 PAHWYCDQGVDCADGSDEPPSC 2838
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 104/245 (42%), Gaps = 61/245 (24%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
++ +C+ + CD + DC + DE + C PGQF C G+CIP+SWKCD DC
Sbjct: 3541 ANKRCIPEAWQCDTEDDCGDNSDEDSAHCASRTCLPGQFKCDNGRCIPQSWKCDVDNDC- 3599
Query: 232 EDGSDEPNTCIHQCFNGQVQ--------CALSKKCIPHNWLCD--------------EEM 269
D SDEP IH+C + C + +CIP +C+ EEM
Sbjct: 3600 GDHSDEP---IHECMGPDYRCNNHTDFSCKTNYRCIPQWAVCNGYDDCRDNSDEQGCEEM 3656
Query: 270 DC---------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
C + DD D +DE +C + +C +++CIP W
Sbjct: 3657 TCNPLGDFRCNNHHCIPLRWKCDAFDDCGDGSDEQNCTPRECSESEFRCD-NQRCIPSRW 3715
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD + DC DN+DE CHP +C +S CV CDG DC +
Sbjct: 3716 ICDHDNDCE-----DNSDER-----DCELRTCHPGYFQC-TSGHCVPEQFKCDGSADCLD 3764
Query: 369 GEDEG 373
DE
Sbjct: 3765 FSDEA 3769
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 105/224 (46%), Gaps = 29/224 (12%)
Query: 174 SSNQCVALSKFCDGKPDC-SNGEDEGPFC-NAECTPGQFSC-GMGKCIPESWKCDGFVDC 230
++ +C++L C+G +C NG + C + C G C CIP ++ CDG DC
Sbjct: 2728 NNGRCISLEYVCNGINNCYDNGTTDERNCPDRTCQSGFTKCQNTNICIPRTYLCDGDNDC 2787
Query: 231 LEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDK 286
+ + P C+ C + + +C S +CIP +W CD+ +DC+ D +DE
Sbjct: 2788 GDMSDESPTHCVSLTCTSNEFRCT-SGRCIPAHWYCDQGVDCA-----DGSDEPPSCVSH 2841
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--AVLCHPNE 344
C Q +C +CIP+ W+CD + DC D +DED HN A C +E
Sbjct: 2842 VRTCSVDQFRCD-DGRCIPNTWICDGDNDCG-----DMSDEDQ----RHNCAARNCTRSE 2891
Query: 345 LRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C ++ +C+ + CDG DCS+ DE C + EN
Sbjct: 2892 FTCVNNRPPLRRCIPRAWICDGDADCSDAYDEHQNCTRRNCTEN 2935
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQF CG G+CIP W+CDG DC +D +DE C Q QC +CIP W+
Sbjct: 13 CDSGQFRCGNGRCIPAHWRCDGAKDCSDD-TDEAGCPHPSCEASQFQCHSDGECIPRAWV 71
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD+E DC +DE C + Q+ C + +CIP+ + CD DC D
Sbjct: 72 CDDEEDCDD-----GSDEHQQCPGRTCSSQQMTCP-NGQCIPNEYRCDRVRDCP-----D 120
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +Y + C ++ C ++ CDGK DC + DE
Sbjct: 121 GADERGCQYPVCEQLTC--------ANGACYNTNQQCDGKIDCRDSSDE 161
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S+ R+ A+++ W D PA + + ++E+A M
Sbjct: 4095 IYWSDASTNRIEVAKLDGRYRKWLISTQLDQPAAVVVNPKLGFMYWTDWGSQPKIERAWM 4154
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G+ R L++ ++ WP+ L IDY N D +YWCDS N +ES++ DG+ ++
Sbjct: 4155 DGQQRQTLISDDLGWPTGLSIDYLNNDRIYWCDSKENIIESMKHDGTDRRLV 4206
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH------ 160
R+E+A M G NR+ ++ I WP+ L IDY +LY+ D++L+ ++ DG+H
Sbjct: 1518 RIERASMDGTNRTVIIRDKIYWPNGLAIDYPNKLLYFMDAYLDYIDFCDYDGNHRRQVVA 1577
Query: 161 -NAVLCHPNEL 170
+ +L HP+ L
Sbjct: 1578 SDLILRHPHAL 1588
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R +V ++ WP+ L +DY++D LYW D++L +E + G++ V+
Sbjct: 2468 NAKIERATLGGNFRIHIVNTSLVWPNGLTLDYDEDWLYWADANLQKIERSSLTGTNREVI 2527
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G NR L+ + WP+ + +D +YW D + +E+V DG +
Sbjct: 517 DPKVERAFMDGTNRQDLIKTKLGWPAGITLDIVSKRVYWVDCRFDYIETVTYDGLQRKTI 576
Query: 165 CHPNEL 170
H +
Sbjct: 577 AHGGSI 582
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 58 LALEFNHRNQSLC---FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEK---A 111
L L RNQ + Q QN+ S+ I + +D + IF D R +K A
Sbjct: 1376 LLLLVTSRNQIVVDNITSQGQNIYSLIRDGEHIVAI--DFDSLSGRIFWSDIRQDKIWSA 1433
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+G +R + + S+ +D+ LYW D L T+E ++DG+H VL N
Sbjct: 1434 FQNGTDRKVVFDSGVTVTESIAVDWVGRNLYWTDYVLETIEVSKMDGNHRTVLISEN 1490
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 17/111 (15%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q + C + + G CDQ C +H
Sbjct: 610 NKFSESNPQIIYQSSLRPYGVTIYHALRQPYVRNPCGNNN-----GGCDQVCVLSHRTDN 664
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L Y C C G+ L DG+ C AV ++FSS + +R I N S
Sbjct: 665 DGLGYRCKCILGFDLHVDGRRCIAVR------QFLLFSSQLAVRGIPFNLS 709
>gi|241780185|ref|XP_002400096.1| vitellogenin receptor, putative [Ixodes scapularis]
gi|215510680|gb|EEC20133.1| vitellogenin receptor, putative [Ixodes scapularis]
Length = 1200
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 146/325 (44%), Gaps = 38/325 (11%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESWKCDGFVDCLED 233
QC + CDG+ DC + DE C A C P F C +CI ++CD VDC ED
Sbjct: 412 GQCFSRDWRCDGQADCKDSSDELD-CGATTGCLPEDFRCTNKECIDPRFRCDRRVDC-ED 469
Query: 234 GSDEPNTC--------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
GSDE N C QC G V C +CI + +CD +DC DE
Sbjct: 470 GSDE-NGCDSSYTANTTSQCPRGMVNCG-DGQCIYEHDICDGYVDCHL-----GQDERNC 522
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-------YFSHNAV 338
C + +V C +K+CI WLCD E DC DN DE + +
Sbjct: 523 TSAMCSSKEVFCINTKRCILEAWLCDGEDDCG-----DNMDETLPRCHPTTTPSTTTTEA 577
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C +E RCGS ++CV S+ CD DC + DEG C+ +N C+H C +P G
Sbjct: 578 ACWSDEFRCGS-HECVPWSRVCDKHLDCMDASDEGSHCDTHCGKDNGGCAHICRESPTGP 636
Query: 399 MCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C C G + C D DEC G C CTNT S+ C+C EGY + D + C A
Sbjct: 637 KCSCHPGYYLTGDFKTCEDLDECQKPGHCSHFCTNTKGSFKCTCAEGYAIAADRQYCKA- 695
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
Q AS+++ IR + G
Sbjct: 696 ---QSGEASLLYMLPNQIRSFSMRG 717
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 110/242 (45%), Gaps = 28/242 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +EL C + C+ + +CDG DCS+ DE C F CG GKC+ +W C
Sbjct: 286 CSAHELSCAGT--CIPATYWCDGYQDCSDNSDENNCGTVTCPANGFRCGNGKCVENAWLC 343
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG+ DC D SDE N C + + QC CIP W CD E DC DN DE
Sbjct: 344 DGYNDC-GDHSDEINCTRRNCTSEEYQCR-ENYCIPVYWRCDGEKDCP-----DNDDEGN 396
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+C +G +C +C +W CD + DC D++DE C P +
Sbjct: 397 CSLIECPSGYDRCR-DGQCFSRDWRCDGQADCK-----DSSDE----LDCGATTGCLPED 446
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPA 404
RC ++ +C+ CD + DC +G DE C++ ++ S PRG M C
Sbjct: 447 FRC-TNKECIDPRFRCDRRVDCEDGSDEN-------GCDSSYTANTTSQCPRG-MVNCGD 497
Query: 405 GQ 406
GQ
Sbjct: 498 GQ 499
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
D +E++ M G R LV+ I WP SL +D+ +LYW DS+ N +ES DG
Sbjct: 840 DGIIERSNMDGSGRVILVSDKILWPCSLTVDHVHKLLYWSDSNKNVIESATFDG 893
>gi|62087224|dbj|BAD92059.1| Very low-density lipoprotein receptor precursor variant [Homo
sapiens]
Length = 555
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 167/362 (46%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 170 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 229
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 230 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCSDQSDESLEQCG 287
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 288 RQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 336
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 337 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVC 395
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 396 NQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 455
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 456 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 511
Query: 478 HL 479
L
Sbjct: 512 GL 513
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 118/254 (46%), Gaps = 48/254 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 83 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 141
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 142 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 200
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 201 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 260
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 261 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 313
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC +G DE
Sbjct: 314 RCDGDPDCKDGSDE 327
>gi|54036090|sp|Q28832.2|LDLR_PIG RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor
Length = 811
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 153/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 78 CSQDEFRC-QDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWAC 136
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 137 DGDPDC-EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK 194
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 195 -----DKSDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDEQ---- 239
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
NA LC PN+ +C S +C++L K C+ DC + DE +C + K CSH
Sbjct: 240 GCVNATLCEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 298
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 299 ICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEP 358
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A+ A + F++ ++R++ L+ S
Sbjct: 359 LTKACKAIGT----IAYLFFTNRHEVRKMTLDRS 388
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 132/330 (40%), Gaps = 77/330 (23%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MGKCIPESWKCDGFVDCL 231
+C++ CDG +C +G DE + C G FSCG + +CIPESW+CDG DC
Sbjct: 6 GKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC- 64
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
E+GSDE C + +C KCI ++CD + DC +D +DE C
Sbjct: 65 ENGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSDEASCPTPTCG 118
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVL-------CHPN 343
QC S CIP W CD + DC D +DE W ++ SH++ L C
Sbjct: 119 PASFQCN-SSTCIPELWACDGDPDCE-----DGSDE-WPQHCRSHSSSLPERSNNPCSAL 171
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKA 380
E C S +C+ S CDG DC + DE C+ +
Sbjct: 172 EFHC-HSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREY 230
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD----------------------- 417
DC+++ C +C P +C+ D
Sbjct: 231 DCKDMSDEQGCV---NATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTN 287
Query: 418 ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 288 ECLDNKGGCSHICNDLKIGYECLCPEGFQL 317
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCIPHNWLCD 266
F C GKCI W CDG +C +DGSDE TC+ C G C +CIP +W CD
Sbjct: 1 FQCQDGKCISYKWICDGNTEC-KDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCD 59
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC + +DE+ C + +C KCI ++CD + DC +D +D
Sbjct: 60 GQQDCE-----NGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSD 108
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
E S C P +C SS C+ CDG PDC +G DE P
Sbjct: 109 E-----ASCPTPTCGPASFQCNSST-CIPELWACDGDPDCEDGSDEWP 150
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPL 104
Y+ + GT ++A + ++L Q++ + ++ + W PA
Sbjct: 460 YWTDSILGTVSVADTKGVKRKTL--FQEKGSKPRAIVVDPVHGFMYWTDWGTPA------ 511
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
+++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 512 --KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTV 569
Query: 164 ------LCHPNEL 170
L HP L
Sbjct: 570 LEDKTKLAHPFSL 582
>gi|268562860|ref|XP_002638687.1| Hypothetical protein CBG11882 [Caenorhabditis briggsae]
Length = 4759
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 150/340 (44%), Gaps = 59/340 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPES 221
+C + +C +++C+ CD DC +G DE C NA C QFSC G+CIP
Sbjct: 1150 VCSAKKFQC-DNHRCIPEQWKCDSDNDCGDGSDEKIELCGNATCAANQFSCANGRCIPIY 1208
Query: 222 WKCDGFVDCL-----------------------------------------EDGSDEPNT 240
W CDG DC EDGSDE +
Sbjct: 1209 WLCDGDNDCYDGTDEDKERCPPVQCSALQFRCANGRQCVPLRNHCDGQNDCEDGSDEDSC 1268
Query: 241 CI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
+ C + Q QC S CIP +W CD ++DC DD D + +C Q +C
Sbjct: 1269 AVSSETCTSDQFQCVSSGLCIPASWKCDGQVDC--DDESDEPRFGCTRGRECKADQFKCG 1326
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQ-CVA 355
+ +CI +NWLCD E DC D +DE ++ N C + C + + C+
Sbjct: 1327 -NGRCILNNWLCDGENDCG-----DGSDESAERGCKSPMNTRKCPFEHVPCENDPETCIP 1380
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQC 413
L + CDGK C G DEG C + C+ KC +P G +C CP G Q NKT+C
Sbjct: 1381 LHQLCDGKRHCPGGTDEGGRCGRDLCSADRAGCAFKCHNSPNGPICSCPQGEQLVNKTKC 1440
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+ECL SC Q C + + CSC EGY L + ++C
Sbjct: 1441 EPENECLDASSCSQHCKDEKHGFTCSCEEGYELDANKRTC 1480
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 152/358 (42%), Gaps = 78/358 (21%)
Query: 150 TVESVRVDGSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNA 203
+V S + S N +C+ N+ RC S +C+ CDG DCS+GEDE P C +
Sbjct: 41 SVRSRIISASVNTASSVCNENDFRC-SDGKCIRAEWKCDGSGDCSDGEDEKDCPHPGCKS 99
Query: 204 E-------------------------------------------CTPGQFSCGMGK-CIP 219
+ +P F C G+ C
Sbjct: 100 DQWQCDTYTWHSVSCIAEYQRCDNITDCADGSDEKDCPASTVDCSSPNVFMCADGRQCFD 159
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ KCDG DC D SDE ++C CF Q +CA +CI +W+CD DC+
Sbjct: 160 ITKKCDGKYDC-RDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCA---- 214
Query: 277 VDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE +F +C + QC +K+C P + CD DC DN+DE+
Sbjct: 215 -DGSDEPETCEFKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDEE-----EC 262
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C P + C + C+ K CDG DC++G DE N C +L C C P+P
Sbjct: 263 GEYRCPPGKWNCPGTGHCIEQLKLCDGSKDCADGADEQQCSQNL--CPSLGCQAGCHPSP 320
Query: 396 RGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCT-EGYTLRPD 449
G C CP+G + C D +EC G CDQ C N + CSC + +TL+ D
Sbjct: 321 HGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMD 378
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 152/327 (46%), Gaps = 35/327 (10%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG--------KCIPESWKCD 225
+C++ + CDG+ DC +G DE N CT +F C +CIP +W CD
Sbjct: 3023 KCISRAFICDGEDDCGDGSDEHARHGCGNRTCTDQEFHCASNAKLAQPKYECIPRAWLCD 3082
Query: 226 GFVDCL---EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
G V C ++ +D T +C G+ +C ++ CI +W CD + DC +D +DE
Sbjct: 3083 GDVTCAGGEDESTDLCKTEKKECNKGEFRCN-NQHCIHASWECDGDNDC-----LDGSDE 3136
Query: 283 DWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ + C QCA + KC+P++W CD DC +D D D + C
Sbjct: 3137 HANCTYSSCQPDFWQCA-NHKCVPNSWRCDGNDDC--EDGSDEKDCPKNSAAGQKTSKCS 3193
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NNKADCENLKCSHKCSPTPRGAM 399
++ +C +S +C+ +K CD DC + DE C + + E C KC G
Sbjct: 3194 KSQFQC-TSGECIDDAKVCDRNFDCGDRSDESSLCFIDECSLAEKPLCEQKCIDQKIGYK 3252
Query: 400 CFCPAG---QNPNKTQCVDADECL--IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C C G ++ C + +EC I G C Q C + SY C+C +GY L D SC
Sbjct: 3253 CDCFEGFAIDVSDQKSCHNVNECFEGISG-CSQKCDDKIGSYKCACVDGYQLSSDDHSCK 3311
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNG 481
V + + EP + ++ IR+I ++G
Sbjct: 3312 RVEM-EPEPF-FLLANKHYIRKISMDG 3336
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 154/340 (45%), Gaps = 39/340 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE CT G C G CI E C
Sbjct: 3883 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCTAGHRQCDDGTCIAEHKWC 3941
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +CA S CIP ++CD + DC DN+D
Sbjct: 3942 DRKKDC-PNAADELHCEDVSRRTCSPFEFECANSV-CIPRKFMCDGDNDCG-----DNSD 3994
Query: 282 EDWD--KFHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSHN 336
E + QC + +CA S+ C+ LC+ DC +D +DE FS
Sbjct: 3995 ETSTECRMAQCDPPLRFRCAHSRLCLNILQLCNGMPDCGPNDF---SDEHLSMCSSFSEG 4051
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNNKADCENLKCSHK 390
+ C ++ +C S+ +CV + CD K DC + DE G + +A N C
Sbjct: 4052 SD-CASDQFKC-SNGKCVNATLACDRKDDCGDASDEIGCSKHGGKTSCEAFGNNGGCKQI 4109
Query: 391 CSPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY--- 444
C+ G C C G P+ +C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 4110 CTDVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYENN 4169
Query: 445 --TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+G+
Sbjct: 4170 VVVGSMTGKDCRA----KGDAANVMIGADSSLVQLSLHGT 4205
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 88/169 (52%), Gaps = 13/169 (7%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
CT +F C KCI ++W+CD DC + + P +C G +C+ S +CIP+
Sbjct: 3758 CTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAF 3817
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
C+ + DC DN+DED + C + G+ +CA + KCIP W+CD E DC D
Sbjct: 3818 CNGQDDCR-----DNSDEDKQRCPTCDDVGEFRCATTGKCIPKRWMCDTENDCG-----D 3867
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DE D C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3868 NSDE-LDASCGGTTRPCSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3914
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE----PNTCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 1065 QFLCKNGRCIPKEWKCDGENDCL-DESDEVDEKGDKCFHETECAENTIKCRNTKKCIPAQ 1123
Query: 263 WLCDEEMDC---------------------------------------STDDIVDNTDED 283
+ CD + DC S +D D +DE
Sbjct: 1124 YGCDGDNDCGDYSDEDVKYCKEGQKPVCSAKKFQCDNHRCIPEQWKCDSDNDCGDGSDE- 1182
Query: 284 WDKFHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
K C N Q CA + +CIP WLCD + DC D TDED ++ V
Sbjct: 1183 --KIELCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDEDKERC---PPV 1231
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + RC + QCV L CDG+ DC +G DE
Sbjct: 1232 QCSALQFRCANGRQCVPLRNHCDGQNDCEDGSDE 1265
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTP-GQFSCGMGKCIPESWKC 224
P +CG + C+ L CD KPDC + DE P +CN P G C +CI + KC
Sbjct: 2800 PYNFQCGDGS-CILLGATCDSKPDCPDASDENPNYCNTRACPDGYHLCTNRRCIDSAKKC 2858
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2859 NHIDDC-GDGSDELDCPSAVSCAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESRAT 2916
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +++C + CI LCD DC D DE ++ F N C
Sbjct: 2917 CPNLPIDCRGVKIRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2968
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2969 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2997
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 58/255 (22%)
Query: 165 CHPN----ELRCGSSN-QCVALSKFCDGKPDCSNGEDE--GPFCNAECTP-GQFSCGMGK 216
C PN + CG + +C+ +CDG+PDC +G DE C P G+F C
Sbjct: 3628 CEPNCTDRQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHN 3687
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW------------- 263
C CDG DC DG+DE N C C +CA + +CIP +
Sbjct: 3688 CTRPFQICDGNDDC-GDGTDEQN-CDKACDPWMFKCAATGRCIPKRFTCDGDDDCGDRSD 3745
Query: 264 ----LC-DEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQC 297
LC + +C+ ++ N + + W + +C G +C
Sbjct: 3746 EADSLCMSPDRNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRC 3805
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ S +CIP+ C+ + DC DN+DED + + + V E RC ++ +C+
Sbjct: 3806 SSSYRCIPNWAFCNGQDDCR-----DNSDEDKQRCPTCDDV----GEFRCATTGKCIPKR 3856
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 3857 WMCDTENDCGDNSDE 3871
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC 265
P F CG G CI CD DC + + PN C C +G C +++CI C
Sbjct: 2800 PYNFQCGDGSCILLGATCDSKPDCPDASDENPNYCNTRACPDGYHLCT-NRRCIDSAKKC 2858
Query: 266 DEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC D +DE D C G C+ + CI +CD DC + + D
Sbjct: 2859 NHIDDCG-----DGSDELDCPSAVSCAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDE 2912
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ + C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2913 SRATCPNL----PIDCRGVKIRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMN 2963
Query: 385 LKCSHKCSPTPRG 397
+C+ P G
Sbjct: 2964 QQCAQHYVRCPSG 2976
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L + LL ++ P +D R
Sbjct: 1559 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPRKGVM 1618
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +D + +Y+ DS L+ ++ V D
Sbjct: 1619 FWTDWGQNPCIERASMDGSDRQIIVKTKIYWPNTIALDLTTNRVYFADSKLDFIDFVNYD 1678
Query: 158 GS 159
G+
Sbjct: 1679 GT 1680
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G +R +V+++I P+++ +D+ ++YW D + +E +G + ++
Sbjct: 2606 RIERSNLAGGSRKVIVSESISLPAAITVDFRNQMIYWADVNRLNIEVADYNGENRKII 2663
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F ++E A M G NR LV + S +V+D +YW D ++ +ES+
Sbjct: 529 LRGEMFFTNQLKIEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 588
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 589 YQGNDRRIVAQ 599
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3481 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3518
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + +WD I+ D R +K A +G N + ++ + + +D+ LYW
Sbjct: 1518 NAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFISDGLDITEGIALDWVGRNLYWV 1577
Query: 145 DSHLNTVESVRV-DGSHNAVLCHPN 168
DS LNT+E + D +L H N
Sbjct: 1578 DSSLNTIEVANLEDPKQRTLLVHQN 1602
>gi|307168698|gb|EFN61730.1| Putative vitellogenin receptor [Camponotus floridanus]
Length = 1335
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/353 (32%), Positives = 167/353 (47%), Gaps = 42/353 (11%)
Query: 144 CDSHLNTVE-SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
CD H + + S ++ N C PN+ C C+ CDG+ DCS+G DE C+
Sbjct: 977 CDGHNDCFDFSDEINNHCNERTCSPNKFMCKDVRNCIPKEWECDGERDCSDGSDELGECS 1036
Query: 203 AE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKK 257
C G+ C G+CI S KC+G DC D SDE C+++ C + + C +
Sbjct: 1037 VNICGDGKLKCNNGRCISSSLKCNGIDDC-GDESDEK-YCLNEKSINCTDDKYLCFNTDI 1094
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH--QCFNGQVQCALSKKCIPHNWLCDEEMD 315
C+P C+ DC +D D+ H CF + C ++KCIP +W+CD+
Sbjct: 1095 CLPKKVKCNGVQDCPKND---------DEHHCTYCFKDEFACD-NEKCIPQSWVCDK--- 1141
Query: 316 CSTDDIVDNTDED------WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
TDD D +DE W K + + +C E +C ++ C++ K CDG DC +G
Sbjct: 1142 --TDDCGDKSDEKDCDGSKWRKVNVNTSNMCE--EFKC-TTGICLSFDKVCDGIRDCLDG 1196
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQ 427
DE C + N+ C C TP G +C C G + C D +EC +D C Q
Sbjct: 1197 SDENGLCTSSCAHNNV-CKDICYKTPLGGVCGCQTGYRLAADTKSCDDINECELD-VCSQ 1254
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C N S+ CSC +GY +R D SC A+ P + +I + +IR+I N
Sbjct: 1255 ICRNIVGSFQCSCHDGYVIRSDRISCKAIGPPME----LITVTDDNIRKISSN 1303
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 131/287 (45%), Gaps = 33/287 (11%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-------TCIHQ--CFNGQVQCALSKK 257
P F C G+C+ ++CDG DC DGSDE N + H C + +C +K
Sbjct: 37 PEWFQCDSGQCVAFIYQCDGDRDCW-DGSDEKNCNKNFTISYPHYIICATNEFKCK-NKD 94
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-----ALSKKCIPHNWLCDE 312
CIP CD DCS D +DE + C N +++C K CI +W+CD
Sbjct: 95 CIPEGKFCDTVKDCS-----DGSDE----YDGCVN-ELKCDDKFRCQDKHCIRKDWVCDN 144
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC N D +K S + + C + +C++L+ CD K DC +G DE
Sbjct: 145 RKDCPDGSDESNCD---NKTLSASDCKNAYDRFLC-LNERCISLNAVCDEKNDCGDGSDE 200
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT-QCVDADECLIDGSCDQTCTN 431
C K C L CS C TP G C C G T C+D DEC I G CDQ C N
Sbjct: 201 DHRC--KIPCTLLNCSDNCKQTPDGPKCICKPGYKIQDTITCIDIDECQIYGICDQGCVN 258
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
T SY C+C GY ++ D K+C A + S + S V+ I+
Sbjct: 259 TVGSYKCTCETGYFMQDDMKTCKATTNNAAKNLSHVSSIAVNGDYIY 305
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 138/376 (36%), Gaps = 90/376 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C +E++C + C+ ++CDG DC NGEDE +C C QF C G CI
Sbjct: 877 CRTDEIKCSEHDICINQHQWCDGNMDCPNGEDEASYCGESGICEKDQFMCKDGTCINSMD 936
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNT 280
+C+ +C D SDE + + QC + + QC CI ++ CD DC +D+I ++
Sbjct: 937 RCNSKYEC-PDKSDEEDCPVLQCHSDEFQCH-DGTCISNSLECDGHNDCFDFSDEINNHC 994
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS----------------------- 317
+E C + C + CIP W CD E DCS
Sbjct: 995 NE-----RTCSPNKFMCKDVRNCIPKEWECDGERDCSDGSDELGECSVNICGDGKLKCNN 1049
Query: 318 ------------TDDIVDNTDEDW-----------DKYFSHNAVLCHPNELRCGS----- 349
DD D +DE + DKY N +C P +++C
Sbjct: 1050 GRCISSSLKCNGIDDCGDESDEKYCLNEKSINCTDDKYLCFNTDICLPKKVKCNGVQDCP 1109
Query: 350 -------------------SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
+ +C+ S CD DC + DE +K N+ S+
Sbjct: 1110 KNDDEHHCTYCFKDEFACDNEKCIPQSWVCDKTDDCGDKSDEKDCDGSKWRKVNVNTSNM 1169
Query: 391 CSPTP-RGAMCFCPAGQNPNKTQCVDADE--------CLIDGSCDQTCTNTHLSYVCSCT 441
C +C C+D + C + C C T L VC C
Sbjct: 1170 CEEFKCTTGICLSFDKVCDGIRDCLDGSDENGLCTSSCAHNNVCKDICYKTPLGGVCGCQ 1229
Query: 442 EGYTLRPDGKSCTAVN 457
GY L D KSC +N
Sbjct: 1230 TGYRLAADTKSCDDIN 1245
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
A M G+N S +T N++WP SL IDY + LYW + N +ES+R+DG+ V+
Sbjct: 404 AEMDGKNSSSFITDNLEWPVSLTIDYPNNRLYWLEKKKNVIESIRLDGTDRRVV 457
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 21/144 (14%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPES 221
++C NE +C + + C+ KFCD DCS+G DE C E +F C CI +
Sbjct: 81 IICATNEFKCKNKD-CIPEGKFCDTVKDCSDGSDEYDGCVNELKCDDKFRCQDKHCIRKD 139
Query: 222 WKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQ-CALSKKCIPHNWLCDEEMDCSTDD 275
W CD DC DGSDE N C N + L+++CI N +CDE+ DC
Sbjct: 140 WVCDNRKDC-PDGSDESNCDNKTLSASDCKNAYDRFLCLNERCISLNAVCDEKNDCG--- 195
Query: 276 IVDNTDEDWDKFHQCFNGQVQCAL 299
D +DED H+C ++ C L
Sbjct: 196 --DGSDED----HRC---KIPCTL 210
>gi|444722393|gb|ELW63090.1| Very low-density lipoprotein receptor [Tupaia chinensis]
Length = 954
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 166/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S C+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 113 CRISEISCGARSTLCIPVSWRCDGENDCDSGEDEENCGNITCSADEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-NDGSDELDCAPPTCSAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ + C P++ +C ++ +C+ CDG DC++G DE C F C G+C
Sbjct: 26 GTGRKLKCEPSQFQC-TNGRCITQLWKCDGDEDCADGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S CIP +W CD E DC +
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRISEISCGARSTLCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPTCSAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 5/105 (4%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+L M+G +R PLVT +IQWP+ + +D + LYW DS L+ + SV ++G ++
Sbjct: 592 QLRSKRMNGFDRRPLVTVDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLK 651
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
E +AL+ F D + +GE+E + + T + +
Sbjct: 652 SLEFLA----HPLALTIFED-RVYWIDGENEAVYGANKFTGSELA 691
>gi|395519503|ref|XP_003763885.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Sarcophilus harrisii]
Length = 3529
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 143/300 (47%), Gaps = 45/300 (15%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCA 253
C C+ QF C G+CIPE W CDG DC + + C + C + QC
Sbjct: 39 CIHSCSDNQFRCSSGRCIPEHWACDGDNDCGDFSDETKANCTKEEIHSPAGCNGNEFQCD 98
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ---------CALSKKCI 304
C+P W CD E DC D +DE + NG V+ C + +CI
Sbjct: 99 PDGNCVPDLWRCDGEKDCE-----DGSDE------KGCNGTVRLCDEKTKFSCKRTGRCI 147
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGK 363
W+CD ++DC D +DED + F LC P + C + ++ C+ K C+G+
Sbjct: 148 NKAWVCDGDIDCE-----DQSDEDDCESF-----LCGPPKYPCANDTSICLQPEKLCNGR 197
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG--QNPNKTQCVDADECL 420
DC +G DEG C ++ N CS+ CS P RG +C CP+G NP+ C D C
Sbjct: 198 KDCPDGSDEGDLC-DECSLNNGGCSNHCSVVPGRGIVCSCPSGLQLNPDNKTCEIVDYCS 256
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C Q C S CSC EG+ L DG+SCT+++ + A IIFS +IRRI L+
Sbjct: 257 RHLKCSQVCEQHKYSVKCSCYEGWKLNMDGESCTSIDPFE---AFIIFSIRHEIRRIDLH 313
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 120/401 (29%), Positives = 163/401 (40%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP---FCNAECTPGQFSCGMGKCIPESWKCDG 226
++C S++ C+ + CDG DC + DE +C F C G+CI +W CDG
Sbjct: 1574 IQCNSTSLCILPAWICDGSNDCGDYSDELKCPVQSKPKCEENYFGCPSGRCILNTWICDG 1633
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ S+KCI W+CD E DC D +D +D
Sbjct: 1634 QKDC-EDGVDEFH-CDSSCSWNQFPCS-SQKCISKQWICDGEDDCG--DGLDESDSICGA 1688
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 1689 V-TCAADMFSCLGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 1747
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKF-CDGKPDCSNGED 371
C P E C + +C++ S + CDG DC + D
Sbjct: 1748 VPKQFVCDHDDDCGDGSDESLECGYRQCSPEEFSC-ADGRCLSNSHWQCDGDFDCPDHSD 1806
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P CN+K DC +
Sbjct: 1807 EAPLNAKCKSAEQSCNSSFFMCKNGRCIPNRSLCNSKDDCGDGSDERNCHINECLSKKVS 1866
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P G C C G ++ KT C+D DEC C Q C NT+ +Y C CTE
Sbjct: 1867 GCSQDCQDLPVGYKCKCWPGFQLKDDGKT-CMDMDECSSGFPCSQQCINTYGTYKCLCTE 1925
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 1926 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 1963
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 144/366 (39%), Gaps = 87/366 (23%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C ++ QC++ CDG DC G+DE
Sbjct: 2462 FWCDGDYDCADGS--DERNCETGCSKDQFQC-ATGQCISAKWKCDGHEDCKFGDDEKNCE 2518
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S +C+G DC DGSDE + C+ +C Q +C CI
Sbjct: 2519 PASPTCSSSEYICASGGCISASLRCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 2576
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK------CIPHNWLCDEE 313
P WLCD DC VD +DED C G C + C H W+CD E
Sbjct: 2577 PIRWLCDGVHDC-----VDGSDED-----HCDRGGNICRADEYLCNNSLCKLHFWVCDGE 2626
Query: 314 MDCS--------------------------------------TDDIVDNTDED--WDKYF 333
DC DD DN+DED DK
Sbjct: 2627 DDCGDNSDEVPEMCAKFPCPPTRPHRCRNNRVCLRPEQICNEIDDCGDNSDEDHCGDK-L 2685
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC-- 391
++ C +E CG +C+ + CD DC +G DE C + + C
Sbjct: 2686 TYKTRPCKKDEFACGD-RKCIPMELQCDRFDDCGDGSDE-------QGCRTVPSEYTCED 2737
Query: 392 -----------SPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+ T C C G +N QC D +ECL+ G+C C N SY C
Sbjct: 2738 NVNPCGDDAYCNQTQTSVFCRCKPGFQRNMRNRQCEDLNECLVFGTCSHQCINMKGSYKC 2797
Query: 439 SCTEGY 444
C + Y
Sbjct: 2798 ICDQNY 2803
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 2247 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 2305
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 2306 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG-----DEEDER 2359
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 2360 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 2409
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 2410 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 2437
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCDG DC +
Sbjct: 2453 ANGDCVSSRFWCDGDYDCADGSDERN-CETGCSKDQFQCATGQCISAKWKCDGHEDC-KF 2510
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 2511 GDDEKNCEPASPTCSSSEYICA-SGGCISASLRCNGEYDCA-----DGSDE-MDCVTECK 2563
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DED + +C +E C +S
Sbjct: 2564 EDQFRCKNKAHCIPIRWLCDGVHDC-----VDGSDED---HCDRGGNICRADEYLCNNS- 2614
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 2615 LCKLHFWVCDGEDDCGDNSDEVP 2637
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 2287 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPINLR 2345
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 2346 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 2399
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 2400 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 2448
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 2449 DFLCANGD-CVSSRFWCDGDYDCADGSDE 2476
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 2366 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 2425
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 2426 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDYDCA-----DGSDER- 2477
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QCA + +CI W CD DC D N + + C +E
Sbjct: 2478 NCETGCSKDQFQCA-TGQCISAKWKCDGHEDCKFGDDEKNCEP--------ASPTCSSSE 2528
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 2529 YICASGG-CISASLRCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 2582
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 2325 VCLSGQFKCTKNQKCIPINLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 2384
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 2385 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 2437
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 2438 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDYDCA-----DGSDE------RNCETGCSK 2485
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C ++ QC++ CDG DC G+DE
Sbjct: 2486 DQFQC-ATGQCISAKWKCDGHEDCKFGDDE 2514
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 107/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ SK CDG+ DC + DE + C +F C G CIP+S +C+ DC D SD
Sbjct: 1493 RCIPNSKLCDGEDDCGDNSDELDCKVSTCAAIEFRCADGTCIPKSARCNQNTDC-ADASD 1551
Query: 237 EPNTCIHQCFN---------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C + G +QC + CI W+CD DC D D
Sbjct: 1552 EKNCSNTDCTHFYKLGVKTTGFIQCNSTSLCILPAWICDGSNDCG--DYSDELKCPVQSK 1609
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 1610 PKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGVDE------FHCDSSCSWNQFPC 1657
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
SS +C++ CDG+ DC +G DE C AD + SH C P
Sbjct: 1658 -SSQKCISKQWICDGEDDCGDGLDESDSICGAVTCAADMFSCLGSHACVPRHWLCDGERD 1716
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 1717 CPNGSDELSTAGCAPNNT 1734
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/433 (23%), Positives = 160/433 (36%), Gaps = 119/433 (27%)
Query: 37 VDNTDEDWDKYFKRILNGT-----------HTLALEFNHRNQSLCFIQQQNVSSVRLRCA 85
+D++ + + + LNG+ + LA+++ +N +++ + +L
Sbjct: 1990 IDSSRPNGSRINRMYLNGSDIKVVHNTAVPNALAVDWIGKNLYWSDTEKRIIEVSKLN-G 2048
Query: 86 QINDLLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSS 131
+L S L P LD R + + GM G N+S ++ I P +
Sbjct: 2049 LYPTILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMA 2108
Query: 132 LVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------C 185
L IDY LYW D N +E +DGSH + PN+ G +AL+ F
Sbjct: 2109 LTIDYVNSRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWT 2160
Query: 186 DGKPDC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG----- 234
DGK ++G D N+ T P+ K V L +G
Sbjct: 2161 DGKTKSLSRAHKTSGADRLSLINSWHTITDIQVYHSYRQPDVAK---HVCMLNNGGCSHL 2217
Query: 235 -------------------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---- 271
+ + TC+ C Q +C + KCIP W CD DC
Sbjct: 2218 CLLAPGRTHTCACPTNFYLAADNKTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGS 2276
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D DN+DE H C +GQ +C +
Sbjct: 2277 DEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKN 2336
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+KCIP N C+ + DC DE+ ++ N+ C P+ +C ++ C++ C
Sbjct: 2337 QKCIPINLRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVC 2386
Query: 361 DGKPDCSNGEDEG 373
D PDC++ DE
Sbjct: 2387 DEDPDCADASDEA 2399
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 95/211 (45%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ +C+ CDG C + DE +C N C G C +CIP S CD
Sbjct: 1444 SEFECGNG-ECIDYQLTCDGIVHCKDKSDEKLLYCENRSCRRGFKYCYNRRCIPNSKLCD 1502
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ DC S + NTD
Sbjct: 1503 GEDDC-GDNSDELDCKVSTCAAIEFRCA-DGTCIPKSARCNQNTDCADASDEKNCSNTDC 1560
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G +QC + CI W+CD DC D +DE K + C
Sbjct: 1561 THFYKLGVKTTGFIQCNSTSLCILPAWICDGSNDCG-----DYSDE--LKCPVQSKPKCE 1613
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 1614 ENYFGC-PSGRCILNTWICDGQKDCEDGVDE 1643
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 99/227 (43%), Gaps = 25/227 (11%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG V C + ++ C ++ + +++CIP++ LCD E
Sbjct: 1445 EFECGNGECIDYQLTCDGIVHCKDKSDEKLLYCENRSCRRGFKYCYNRRCIPNSKLCDGE 1504
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDE 327
DC DN+DE K C + +CA CIP + C++ DC+ D + ++
Sbjct: 1505 DDCG-----DNSDELDCKVSTCAAIEFRCA-DGTCIPKSARCNQNTDCADASDEKNCSNT 1558
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
D ++ ++C S++ C+ + CDG DC + DE LKC
Sbjct: 1559 DCTHFYKLGVKT--TGFIQCNSTSLCILPAWICDGSNDCGDYSDE------------LKC 1604
Query: 388 SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
+ P CP+G+ T D + DG CD +C+
Sbjct: 1605 PVQSKPKCEENYFGCPSGRCILNTWICDGQKDCEDGVDEFHCDSSCS 1651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSCG-M 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 85 HSPAGCNGNEFQCDPDGNCVPDLWRCDGEKDCEDGSDE-KGCNGTVRLCDEKTKFSCKRT 143
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 144 GRCINKAWVCDGDIDC-EDQSDEDDCESFLCGPPKYPCANDTSICLQPEKLCNGRKDC 200
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D +YW D L+ + SV DGS + +
Sbjct: 2982 IEEAAMDGTLRRILVQKNLQRPTGLAVDQFSQRIYWADFELSIIGSVLFDGSDSVISVSS 3041
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 3042 KQGLLHPHRI 3051
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ ++ +E + ++ N
Sbjct: 1061 IGKARLDGSEKVILVSMGIAWPNGVSIDYEENKLYWCDARIDKIERIDLESGGN 1114
>gi|329744622|ref|NP_001193283.1| low-density lipoprotein receptor precursor [Sus scrofa]
Length = 845
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 153/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 109 CSQDEFRC-QDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWAC 167
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 168 DGDPDC-EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK 225
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 226 -----DKSDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDEQ---- 270
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
NA LC PN+ +C S +C++L K C+ DC + DE +C + K CSH
Sbjct: 271 GCVNATLCEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 329
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 330 ICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEP 389
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A+ A + F++ ++R++ L+ S
Sbjct: 390 LTKACKAIGT----IAYLFFTNRHEVRKMTLDRS 419
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 137/341 (40%), Gaps = 78/341 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIPE
Sbjct: 27 CGRNEFQC-RDGKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPE 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 SWRCDGQQDC-ENGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVL 339
DE C QC S CIP W CD + DC D +DE W ++ SH++ L
Sbjct: 139 DEASCPTPTCGPASFQCN-SSTCIPELWACDGDPDCE-----DGSDE-WPQHCRSHSSSL 191
Query: 340 -------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------- 372
C E C S +C+ S CDG DC + DE
Sbjct: 192 PERSNNPCSALEFHC-HSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTC 250
Query: 373 ---GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD------------ 417
C+ + DC+++ C +C P +C+ D
Sbjct: 251 IHGSRQCDREYDCKDMSDEQGCV---NATLCEGPNKFKCQSGECISLDKVCNSVRDCRDW 307
Query: 418 -----------ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 308 SDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFQL 348
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC+ C G C +CIP
Sbjct: 26 KCGRNEFQCRDGKCISYKWICDGNTEC-KDGSDESLETCMSVTCKIGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD + DC + +DE+ C + +C KCI ++CD + DC
Sbjct: 85 ESWRCDGQQDCE-----NGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S C P +C SS C+ CDG PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPTPTCGPASFQCNSST-CIPELWACDGDPDCEDGSDEWP 181
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPL 104
Y+ + GT ++A + ++L Q++ + ++ + W PA
Sbjct: 491 YWTDSILGTVSVADTKGVKRKTL--FQEKGSKPRAIVVDPVHGFMYWTDWGTPA------ 542
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
+++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 543 --KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTV 600
Query: 164 ------LCHPNEL 170
L HP L
Sbjct: 601 LEDKTKLAHPFSL 613
>gi|46577126|sp|Q9JI18.1|LRP1B_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 1B;
Short=LRP-1B; AltName: Full=Low-density lipoprotein
receptor-related protein-deleted in tumor; Short=LRP-DIT;
Flags: Precursor
gi|8926243|gb|AAF81758.1|AF270884_1 low density lipoprotein receptor related protein LRP1B/LRP-DIT [Mus
musculus]
Length = 4599
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P S +C++ CD DC + DE C C QF C G+CIP W C
Sbjct: 967 CEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE-VGCVHSCLDDQFRCSSGRCIPGHWAC 1025
Query: 225 DGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DG DC D SDE + C + C + QC CIP W CD E DC
Sbjct: 1026 DGDNDC-GDFSDETHINCTKEEARSPAGCIGNEFQCRPDGNCIPDLWRCDGEKDCE---- 1080
Query: 277 VDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C + C + +CI + W+CD ++DC D +DE+
Sbjct: 1081 -DGSDEKGCNGTIRLCDHKTKFSCRSTGRCINNAWVCDGDVDCE-----DQSDEE----- 1129
Query: 334 SHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
++ LC P + C + ++ C+ K C+G+ DC +G DEG C ++ N CS+ CS
Sbjct: 1130 DCDSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLC-DECSLNNGGCSNHCS 1188
Query: 393 PTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P RG +C CP G K C D C C Q C CSC EG+ L D
Sbjct: 1189 VVPGRGIVCSCPEGHQLKKDNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTD 1248
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1249 GESCTSVDSFE---AFIIFSIRHEIRRIDLH 1276
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H C G+ C C+ +WLCD + DC D +DE D + C N + C
Sbjct: 30 HLCDPGEFLCHDHVTCVSQSWLCDGDPDCP-----DQSDESLDTCPEEVEIKCPLNHIAC 84
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG- 405
S+ CV LSK C+G DC +G DEG C C+ L C KC+ C+C G
Sbjct: 85 HGSSACVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRNATRCYCEDGF 144
Query: 406 -QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ C D DEC I G C QTC NT+ SY CSC EGY ++ D +SC + P D+
Sbjct: 145 EVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDKAP 204
Query: 465 SIIFSSTVDIRRIHLNGS 482
++ SS I ++NGS
Sbjct: 205 MLLISSLETIELFYINGS 222
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 157/400 (39%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2644 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2703
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ KKCI +W+CD E DC D +D +D
Sbjct: 2704 QKDC-EDGLDELH-CDSSCSWNQFACSV-KKCISKHWICDGEDDCG--DSLDESDSICGA 2758
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC S+ N D + + HN V
Sbjct: 2759 V-TCAADMFSCQGSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKVC 2817
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E RC V CDG DC + DE
Sbjct: 2818 IPKQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDE 2877
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C+ + DC +
Sbjct: 2878 APINPRCRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINECLSKKISG 2937
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C C EG
Sbjct: 2938 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCHCAEG 2996
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y +PD C +++ DE +I + +IR+I +GS
Sbjct: 2997 YETQPDNPNGCRSLS---DEEPFLILADQHEIRKISTDGS 3033
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 144/368 (39%), Gaps = 91/368 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3532 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEK--- 3585
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q QC
Sbjct: 3586 NCEPAFPVCSSSEYMCASGGCLSASLKCNGEPDCV-DGSDEMD-CVIECKEDQFQCKNKA 3643
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA------LSKKCIPHNWLC 310
CIP WLCD DC VD +DE+ C G C + C H W+C
Sbjct: 3644 YCIPIRWLCDGIYDC-----VDGSDEE-----TCGRGGSICRDDEFLCNNSLCKLHFWVC 3693
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNG 369
D E DC DN+DE D LC P RC + C+ L K C+G DC +
Sbjct: 3694 DGEDDCG-----DNSDEAPDMCVK---FLCPPTRPYRCRNDRICLQLEKICNGINDCGDN 3745
Query: 370 EDE-----------GPFCNNKADCENLKC------------------SHKCSPTP----- 395
DE P ++ C N C C TP
Sbjct: 3746 SDEEHCSGKLSLKSKPCKKDEFTCSNRNCIPMELQCDSLDDCGDGSDEQGCLKTPIEHTC 3805
Query: 396 -----------------RGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
C C G +N +C D +ECL+ G C C NT SY
Sbjct: 3806 ENNGNPCGDDAYCNQIKTSVFCRCKPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSY 3865
Query: 437 VCSCTEGY 444
C C + +
Sbjct: 3866 KCVCDQNF 3873
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C +KKCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCG-----DEEDEK 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDNQNDCSDNSDE 3507
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DED + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDED-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV+ +CDG+ DC++G DE
Sbjct: 3519 DFLC-SNGDCVSSRFWCDGEFDCADGSDE 3546
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 3508 DNCKPQTCTLKDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3556 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 3584
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV K CDG DC + DE + C+ +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCVPHGKLCDGTNDCGDSSDELDCKVSTCSTVEFRCADGTCIPRSARCNQNMDC-SDASD 2621
Query: 237 EP---NT-CIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E NT C H G ++C + C+ +W+CD DC D D
Sbjct: 2622 EKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------LHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S +C++ CDG+ DC + DE C AD + + SH C P
Sbjct: 2728 -SVKKCISKHWICDGEDDCGDSLDESDSICGAVTCAADMFSCQGSHACVPQHWLCDGERD 2786
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2787 CPDGSDELSSAGCAPNNT 2804
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ + CV CDG P C + DE +C N C G C +C+P CD
Sbjct: 2514 SEFECGNGD-CVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCD 2572
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ MDC S + +NTD
Sbjct: 2573 GTNDC-GDSSDELDCKVSTCSTVEFRCA-DGTCIPRSARCNQNMDCSDASDEKGCNNTDC 2630
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ +W+CD DC D +DE K N C
Sbjct: 2631 THFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 2683
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 2684 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE 2713
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 132/370 (35%), Gaps = 109/370 (29%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3123 VLVSKRLKFPRDLSLDPRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3182
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3183 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3234
Query: 190 DC------SNGEDEGPFCNA---------------------ECTPGQFSCG----MGKCI 218
++G D N+ CT C +G
Sbjct: 3235 KSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCTVNNGGCSHLCLLGPGK 3294
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------- 271
+ C D TC+ C Q +C + KCIP W CD DC
Sbjct: 3295 THTCACPTNFYLAADN----RTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEP 3349
Query: 272 ----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D DN+DE H C GQ +C +KKC
Sbjct: 3350 DDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKC 3409
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP N C+ + DC DE+ +K N+ C P+ +C ++ C++ CD
Sbjct: 3410 IPVNLRCNGQDDCG--------DEEDEKDCPENS--CSPDYFQCKTTKHCISKLWVCDED 3459
Query: 364 PDCSNGEDEG 373
PDC++ DE
Sbjct: 3460 PDCADASDEA 3469
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 47/265 (17%)
Query: 186 DGKPDCSNGEDEGPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
DG+ +CS D N C +F CG G C+ CDG C + ++
Sbjct: 2484 DGRVNCSCRGDRVLLANNRCVTKNSSCNIYSEFECGNGDCVDYVLTCDGIPHCKDKSDEK 2543
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C ++ + +++C+PH LCD DC D++DE K C + +C
Sbjct: 2544 LLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDCG-----DSSDELDCKVSTCSTVEFRC 2598
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQC 353
A CIP + C++ MDCS D +DE + D + + +RC S++ C
Sbjct: 2599 A-DGTCIPRSARCNQNMDCS-----DASDEKGCNNTDCTHFYKLGVKSTGFIRCNSTSLC 2652
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSPTPRGAMCFCPAGQNPN 409
V S CDG DC + DE LKC HKC G CP+G+
Sbjct: 2653 VLPSWICDGSNDCGDYSDE------------LKCPVQNKHKCEENYFG----CPSGRCIL 2696
Query: 410 KTQCVDADECLIDG----SCDQTCT 430
T D + DG CD +C+
Sbjct: 2697 NTWVCDGQKDCEDGLDELHCDSSCS 2721
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 85 AQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI 140
A + D +N W D +I R+EKA M G NR VT + WP+ L +D++
Sbjct: 649 AIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPNGLTLDFHTST 708
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
LYWCD++ + +E V ++G+H V+ EL
Sbjct: 709 LYWCDAYYDHIEKVFLNGTHRKVVYSGKEL 738
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNW 263
C PG+F C CI WKCDG DCL+ ++ TC H C + Q +C + +CIP W
Sbjct: 845 CKPGEFRCKNKHCIQARWKCDGDDDCLDGSDEDSVTCFNHSCPDDQFKCQ-NNRCIPKRW 903
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
LCD DC +++ D +++ C Q C + +CIP WLCD E DC D
Sbjct: 904 LCDGANDCGSNE--DESNQTCTA-RTCQADQFSCG-NGRCIPTAWLCDREDDCG-----D 954
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
TDE F C P S +C++ CD DC + DE
Sbjct: 955 QTDEVASCEFP----TCEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE 999
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + +V+ I WP+ + IDY ++ LYWCD+ + +E + +D G++ VL
Sbjct: 2021 IGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIERIDLDTGANREVL 2078
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 4052 IEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDG 4102
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCN 202
L E + V + + LC P E C CV+ S CDG PDC + DE
Sbjct: 15 LPNAEVLIVGANQDQHLCDPGEFLCHDHVTCVSQSWLCDGDPDCPDQSDESLDTCPEEVE 74
Query: 203 AECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
+C +C G C+ S C+G VDC DG DE C Q N Q +CA+ +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDC-PDGFDEGGHCQELLPSCQQLNCQFKCAMVR 133
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C S+ CV LSK C+G DC +G DEG C E P QF C M +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDCPDGFDEGGHCQ-ELLPSCQQLNCQFKCAMVR 133
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 134 NATRCYCEDGF-EVAEDG 150
>gi|153792247|ref|NP_443737.2| low-density lipoprotein receptor-related protein 1B precursor [Mus
musculus]
Length = 4599
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P S +C++ CD DC + DE C C QF C G+CIP W C
Sbjct: 967 CEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE-VGCVHSCLDDQFRCSSGRCIPGHWAC 1025
Query: 225 DGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DG DC D SDE + C + C + QC CIP W CD E DC
Sbjct: 1026 DGDNDC-GDFSDETHINCTKEEARSPAGCIGNEFQCRPDGNCIPDLWRCDGEKDCE---- 1080
Query: 277 VDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C + C + +CI + W+CD ++DC D +DE+
Sbjct: 1081 -DGSDEKGCNGTIRLCDHKTKFSCRSTGRCINNAWVCDGDVDCE-----DQSDEE----- 1129
Query: 334 SHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
++ LC P + C + ++ C+ K C+G+ DC +G DEG C ++ N CS+ CS
Sbjct: 1130 DCDSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLC-DECSLNNGGCSNHCS 1188
Query: 393 PTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P RG +C CP G K C D C C Q C CSC EG+ L D
Sbjct: 1189 VVPGRGIVCSCPEGHQLKKDNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTD 1248
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1249 GESCTSVDSFE---AFIIFSIRHEIRRIDLH 1276
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H C G+ C C+ +WLCD + DC D +DE D + C N + C
Sbjct: 30 HLCDPGEFLCHDHVTCVSQSWLCDGDPDCP-----DQSDESLDTCPEEVEIKCPLNHIAC 84
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG- 405
S+ CV LSK C+G DC +G DEG C C+ L C KC+ C+C G
Sbjct: 85 HGSSACVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRNATRCYCEDGF 144
Query: 406 -QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ C D DEC I G C QTC NT+ SY CSC EGY ++ D +SC + P D+
Sbjct: 145 EVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDKAP 204
Query: 465 SIIFSSTVDIRRIHLNGS 482
++ SS I ++NGS
Sbjct: 205 MLLISSLETIELFYINGS 222
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 157/400 (39%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2644 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2703
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ KKCI +W+CD E DC D +D +D
Sbjct: 2704 QKDC-EDGLDELH-CDSSCSWNQFACSV-KKCISKHWICDGEDDCG--DSLDESDSICGA 2758
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC S+ N D + + HN V
Sbjct: 2759 V-TCAADMFSCQGSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKVC 2817
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E RC V CDG DC + DE
Sbjct: 2818 IPKQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDE 2877
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C+ + DC +
Sbjct: 2878 APINPRCRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINECLSKKISG 2937
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C C EG
Sbjct: 2938 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCHCAEG 2996
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y +PD C +++ DE +I + +IR+I +GS
Sbjct: 2997 YETQPDNPNGCRSLS---DEEPFLILADQHEIRKISTDGS 3033
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 144/368 (39%), Gaps = 91/368 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3532 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEK--- 3585
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q QC
Sbjct: 3586 NCEPAFPVCSSSEYMCASGGCLSASLKCNGEPDCV-DGSDEMD-CVIECKEDQFQCKNKA 3643
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA------LSKKCIPHNWLC 310
CIP WLCD DC VD +DE+ C G C + C H W+C
Sbjct: 3644 YCIPIRWLCDGIYDC-----VDGSDEE-----TCGRGGSICRDDEFLCNNSLCKLHFWVC 3693
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNG 369
D E DC DN+DE D LC P RC + C+ L K C+G DC +
Sbjct: 3694 DGEDDCG-----DNSDEAPDMCVK---FLCPPTRPYRCRNDRICLQLEKICNGINDCGDN 3745
Query: 370 EDE-----------GPFCNNKADCENLKC------------------SHKCSPTP----- 395
DE P ++ C N C C TP
Sbjct: 3746 SDEEHCSGKLSLKSKPCKKDEFTCSNRNCIPMELQCDSLDDCGDGSDEQGCLKTPIEHTC 3805
Query: 396 -----------------RGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
C C G +N +C D +ECL+ G C C NT SY
Sbjct: 3806 ENNGNPCGDDAYCNQIKTSVFCRCKPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSY 3865
Query: 437 VCSCTEGY 444
C C + +
Sbjct: 3866 KCVCDQNF 3873
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C +KKCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCG-----DEEDEK 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDNQNDCSDNSDE 3507
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DED + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDED-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV+ +CDG+ DC++G DE
Sbjct: 3519 DFLC-SNGDCVSSRFWCDGEFDCADGSDE 3546
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 3508 DNCKPQTCTLKDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3556 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 3584
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV K CDG DC + DE + C+ +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCVPHGKLCDGTNDCGDSSDELDCKVSTCSTVEFRCADGTCIPRSARCNQNMDC-SDASD 2621
Query: 237 EP---NT-CIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E NT C H G ++C + C+ +W+CD DC D D
Sbjct: 2622 EKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------LHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S +C++ CDG+ DC + DE C AD + + SH C P
Sbjct: 2728 -SVKKCISKHWICDGEDDCGDSLDESDSICGAVTCAADMFSCQGSHACVPQHWLCDGERD 2786
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2787 CPDGSDELSSAGCAPNNT 2804
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ + CV CDG P C + DE +C N C G C +C+P CD
Sbjct: 2514 SEFECGNGD-CVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCD 2572
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ MDC S + +NTD
Sbjct: 2573 GTNDC-GDSSDELDCKVSTCSTVEFRCA-DGTCIPRSARCNQNMDCSDASDEKGCNNTDC 2630
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ +W+CD DC D +DE K N C
Sbjct: 2631 THFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 2683
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 2684 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE 2713
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 132/370 (35%), Gaps = 109/370 (29%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3123 VLVSKRLKFPRDLSLDPRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3182
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3183 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3234
Query: 190 DC------SNGEDEGPFCNA---------------------ECTPGQFSCG----MGKCI 218
++G D N+ CT C +G
Sbjct: 3235 KSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCTVNNGGCSHLCLLGPGK 3294
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------- 271
+ C D TC+ C Q +C + KCIP W CD DC
Sbjct: 3295 THTCACPTNFYLAADN----RTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEP 3349
Query: 272 ----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D DN+DE H C GQ +C +KKC
Sbjct: 3350 DDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKC 3409
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP N C+ + DC DE+ +K N+ C P+ +C ++ C++ CD
Sbjct: 3410 IPVNLRCNGQDDCG--------DEEDEKDCPENS--CSPDYFQCKTTKHCISKLWVCDED 3459
Query: 364 PDCSNGEDEG 373
PDC++ DE
Sbjct: 3460 PDCADASDEA 3469
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 47/265 (17%)
Query: 186 DGKPDCSNGEDEGPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
DG+ +CS D N C +F CG G C+ CDG C + ++
Sbjct: 2484 DGRVNCSCRGDRVLLANNRCVTKNSSCNIYSEFECGNGDCVDYVLTCDGIPHCKDKSDEK 2543
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C ++ + +++C+PH LCD DC D++DE K C + +C
Sbjct: 2544 LLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDCG-----DSSDELDCKVSTCSTVEFRC 2598
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQC 353
A CIP + C++ MDCS D +DE + D + + +RC S++ C
Sbjct: 2599 A-DGTCIPRSARCNQNMDCS-----DASDEKGCNNTDCTHFYKLGVKSTGFIRCNSTSLC 2652
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSPTPRGAMCFCPAGQNPN 409
V S CDG DC + DE LKC HKC G CP+G+
Sbjct: 2653 VLPSWICDGSNDCGDYSDE------------LKCPVQNKHKCEENYFG----CPSGRCIL 2696
Query: 410 KTQCVDADECLIDG----SCDQTCT 430
T D + DG CD +C+
Sbjct: 2697 NTWVCDGQKDCEDGLDELHCDSSCS 2721
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 85 AQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI 140
A + D +N W D +I R+EKA M G NR VT + WP+ L +D++
Sbjct: 649 AIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPNGLTLDFHTST 708
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
LYWCD++ + +E V ++G+H V+ EL
Sbjct: 709 LYWCDAYYDHIEKVFLNGTHRKVVYSGKEL 738
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNW 263
C PG+F C CI WKCDG DCL+ ++ TC H C + Q +C + +CIP W
Sbjct: 845 CKPGEFRCKNKHCIQARWKCDGDDDCLDGSDEDSVTCFNHSCPDDQFKCQ-NNRCIPKRW 903
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
LCD DC +++ D +++ C Q C + +CIP WLCD E DC D
Sbjct: 904 LCDGANDCGSNE--DESNQTCTA-RTCQADQFSCG-NGRCIPTAWLCDREDDCG-----D 954
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
TDE F C P S +C++ CD DC + DE
Sbjct: 955 QTDEVASCEFP----TCEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE 999
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + +V+ I WP+ + IDY ++ LYWCD+ + +E + +D G++ VL
Sbjct: 2021 IGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIERIDLDTGANREVL 2078
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 4052 IEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDG 4102
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCN 202
L E + V + + LC P E C CV+ S CDG PDC + DE
Sbjct: 15 LPNAEVLIVGANQDQHLCDPGEFLCHDHVTCVSQSWLCDGDPDCPDQSDESLDTCPEEVE 74
Query: 203 AECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
+C +C G C+ S C+G VDC DG DE C Q N Q +CA+ +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDC-PDGFDEGGHCQELLPSCQQLNCQFKCAMVR 133
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C S+ CV LSK C+G DC +G DEG C E P QF C M +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDCPDGFDEGGHCQ-ELLPSCQQLNCQFKCAMVR 133
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 134 NATRCYCEDGF-EVAEDG 150
>gi|3153895|gb|AAC17444.1| low density lipoprotein receptor [Sus scrofa]
Length = 801
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 153/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 78 CSQDEFRC-QDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWAC 136
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 137 DGDPDC-EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK 194
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 195 -----DKSDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDEQ---- 239
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
NA LC PN+ +C S +C++L K C+ DC + DE +C + K CSH
Sbjct: 240 GCVNATLCEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 298
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 299 ICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEP 358
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A+ A + F++ ++R++ L+ S
Sbjct: 359 LTKACKAIGT----IAYLFFTNRHEVRKMTLDRS 388
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 132/330 (40%), Gaps = 77/330 (23%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MGKCIPESWKCDGFVDCL 231
+C++ CDG +C +G DE + C G FSCG + +CIPESW+CDG DC
Sbjct: 6 GKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC- 64
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
E+GSDE C + +C KCI ++CD + DC +D +DE C
Sbjct: 65 ENGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSDEASCPTPTCG 118
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVL-------CHPN 343
QC S CIP W CD + DC D +DE W ++ SH++ L C
Sbjct: 119 PASFQCN-SSTCIPELWACDGDPDCE-----DGSDE-WPQHCRSHSSSLPERSNNPCSAL 171
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKA 380
E C S +C+ S CDG DC + DE C+ +
Sbjct: 172 EFHC-HSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREY 230
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD----------------------- 417
DC+++ C +C P +C+ D
Sbjct: 231 DCKDMSDEQGCV---NATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTN 287
Query: 418 ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 288 ECLDNKGGCSHICNDLKIGYECLCPEGFQL 317
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCIPHNWLCD 266
F C GKCI W CDG +C +DGSDE TC+ C G C +CIP +W CD
Sbjct: 1 FQCQDGKCISYKWICDGNTEC-KDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCD 59
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC + +DE+ C + +C KCI ++CD + DC +D +D
Sbjct: 60 GQQDCE-----NGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSD 108
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
E S C P +C SS C+ CDG PDC +G DE P
Sbjct: 109 E-----ASCPTPTCGPASFQCNSST-CIPELWACDGDPDCEDGSDEWP 150
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--N 92
D DW + Y+ + GT ++A + ++L Q++ + ++ +
Sbjct: 448 DGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTL--FQEKGSKPRAIVVDPVHGFMYWT 505
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++
Sbjct: 506 DWGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSIS 557
Query: 153 SVRVDGSHNAV-------LCHPNEL 170
S+ V+G + L HP L
Sbjct: 558 SIDVNGGNRKTVLEDKTKLAHPFSL 582
>gi|297264010|ref|XP_001117994.2| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Macaca mulatta]
Length = 4637
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 924 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 982
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 983 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1042
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1043 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 1101
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
CIP W CD E DC D
Sbjct: 1102 GNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1161
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1162 DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCD-ECS 1215
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1216 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1275
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1276 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1314
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 167/401 (41%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C FSC G+CI +W CDG
Sbjct: 2682 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILTTWICDG 2741
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2742 QQDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2796
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2797 V-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2854
Query: 340 CHPNEL---------------------RCGSS------NQCVALSKF-CDGKPDCSNGED 371
C P + +CG+ +C+ +++ CDG DC + D
Sbjct: 2855 CIPKQFVCDHDDDCGDGSDESSQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCPDHSD 2914
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P CNNK DC +
Sbjct: 2915 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVS 2974
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 2975 GCSQDCQDLPISYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCVNTYGTYKCLCTD 3033
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY +PD C +++ DE +I + +IR+I +GS
Sbjct: 3034 GYETQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3071
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C +C+ L C +KC+
Sbjct: 113 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLPNCQQLNCQYKCTMVGN 172
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++ D +SC
Sbjct: 173 STRCYCENGFEIKEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQSDNRSCK 232
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 233 AKIEPTDRPPILLIANFETIEIFYLNGS 260
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 149/370 (40%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 3570 FWCDGDFDCADGS--DERNCEISCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3626
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3627 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3684
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H+W+CD E
Sbjct: 3685 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHSWVCDGE 3734
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3735 DDCGDNSDEAPDMCVKFICPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCTGKLT 3794
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3795 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3853
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A+C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3854 ANCNQIKTS---------VFCRCKPGFQRNMKHRQCEDLNECLVFGTCSHQCINVEGSYK 3904
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3905 CVCDQNFQER 3914
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3355 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3413
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3414 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3467
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3468 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3517
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3518 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3545
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCI 259
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC +
Sbjct: 3351 CLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCAL 3409
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 3410 PA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-- 3461
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3462 ------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3507
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3561 ANGDCVSSRFWCDGDFDCADGSDERN-CEISCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 3618
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3619 GEDEKSCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3671
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3672 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3722
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C S CDG+ DC + DE P
Sbjct: 3723 LCKLHSWVCDGEDDCGDNSDEAP 3745
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 921 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 979
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 980 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1039
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 1040 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 1096
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 1097 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1156
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1157 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSL 1216
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1217 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1254
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3433 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3492
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3493 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3545
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + + C
Sbjct: 3546 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEISCSK 3593
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3594 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 3622
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3474 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3533
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3534 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDERN 3586
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CIP W CD DC ED +K + C +E
Sbjct: 3587 CEI-SCSKDQFQCS-NGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 3636
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3637 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 3690
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3395 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3453
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3454 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3507
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3508 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3556
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3557 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3584
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 107/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2601 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2659
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2660 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2717
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI W+CD + DC D DE H C N+ C
Sbjct: 2718 HKCEENYFSCP-SGRCILTTWICDGQQDCE-----DGLDE------FHCDSSCSWNQFAC 2765
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2766 -SAQKCISKHWICDGEDDCGDGLDESDSICGAVTCAADMFSCQGSHACVPRHWLCDGERD 2824
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2825 CPNGSDELSTAGCAPNNT 2842
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2553 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2612
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2613 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2666
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2667 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2709
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 689 VVDPINGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 748
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 749 WCDAYYDHIEKVFLNGTHRKIVYSGREL 776
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4090 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSIVSVSS 4149
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4150 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4184
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 117/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2382 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2441
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2442 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2501
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C +G V+C G E N C+ + + +C + +
Sbjct: 2502 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECG-NGE 2560
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 2561 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 2614
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2615 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2660
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2661 ----KNCNNTDCTH 2670
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1086 HSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKG-CNGTIRLCDHKTKFSCWST 1144
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1145 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDC 1201
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G H V+
Sbjct: 2059 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGHREVV 2116
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 388 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRHAIIQ 447
Query: 167 PNELR 171
++R
Sbjct: 448 GRQVR 452
>gi|198469011|ref|XP_001354886.2| GA12483 [Drosophila pseudoobscura pseudoobscura]
gi|198146674|gb|EAL31942.2| GA12483 [Drosophila pseudoobscura pseudoobscura]
Length = 1994
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 160/373 (42%), Gaps = 72/373 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMGKCIPES 221
CH ++L C + +CV S CDGK DC + DE A C G F C G CI S
Sbjct: 1143 CHVHQLAC-DNGKCVDQSLMCDGKNDCGDNTDEDKAKCDSPANCDQGMFQCSNGACIAAS 1201
Query: 222 WKCDGFVDCLEDGSDEPNTC--------IHQCFNGQ------------------------ 249
W+CDG +DC D SDE + C +H+C GQ
Sbjct: 1202 WECDGRIDC-SDASDEHDKCGHRRCPPDMHRCLLGQCLDRRLVCDGHNDCGDLSDELNCG 1260
Query: 250 --------VQC-ALSKKCIPHNWLC-DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+ C +L +C + LC D + C+ +++ D C + QC
Sbjct: 1261 SGAHAKANISCGSLLYQCASNLKLCLDPAVRCNGTAECPRGEDEADCGDMCSINEFQCRT 1320
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDED---------WDKYFSHNAVLCHPNELRCGSS 350
K+CI + CD DC +D +DE+ K ++ + C P+ C
Sbjct: 1321 GKQCIRKEFHCDRARDC-----LDGSDEEACDKIQNQTLSKPWTTASRACRPHLFDC-QD 1374
Query: 351 NQCVALSKFCDGKPDCSNGEDEGP----FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
+CV +S+ C+ PDC NG DEGP C A C HKC TP GA+C C G
Sbjct: 1375 GECVDMSRVCNSFPDCQNGSDEGPQCATACRASAGGGRPVCQHKCRATPAGAVCSCFDGY 1434
Query: 407 NPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ Q CVD +ECL C Q C NT Y C C + LR D SC ++ A
Sbjct: 1435 RLDTDQRSCVDVNECLDGQPCAQICENTLGGYQCQCHADFMLRQDRVSCKSLQA----GA 1490
Query: 465 SIIFSSTVDIRRI 477
+++FSS ++R +
Sbjct: 1491 TLLFSSYNEVRNL 1503
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 148/335 (44%), Gaps = 52/335 (15%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CD + DC++ DE C P F C G C+ KC+G +C +G
Sbjct: 115 CILQAKMCDARSDCTDATDELDCDYKLCREPHWFPCAQPHGACLAAELKCNGIDNC-PNG 173
Query: 235 SDEPN----------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIV 277
DE N C + C + CIP + CD + DC+ + D +
Sbjct: 174 EDEINCPSGILGMSSRFGSFRKLPRNCSASEYMCQRDRSCIPIEFQCDGKSDCADSSDEL 233
Query: 278 DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D E K H C NG+ L +K WLCD DD D +DE H
Sbjct: 234 DGCKESQASCKGHLCPNGRC---LQRK----QWLCD-----GVDDCGDGSDE-------H 274
Query: 336 NAV-LCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
V LC P + C + C+ L+K CDG DCS+G DE CN+K DC C +
Sbjct: 275 GCVDLCQPEMGKFMCRNKEHCLELAKVCDGHSDCSDGSDEYETCNSKPDCSAKSCPAGAT 334
Query: 393 ---PTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYT 445
+ GA C+CPAG K Q C D DEC S C Q+C NT Y CSC GY
Sbjct: 335 CHMMSTDGAQCYCPAGFRLAKFQNKCEDIDECQERESELCSQSCENTSGGYRCSCDPGYL 394
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
L D ++C A N + +++++ +++ +HL
Sbjct: 395 LAKDNRTCRAANTHGSDHPLLLYTTQMNVMGMHLG 429
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 116/256 (45%), Gaps = 41/256 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---------CTPGQFSCGMGK-CI 218
E RC SS +C+ L+ C+G+ DC + DE C+ E C P QF+C + C+
Sbjct: 1055 EFRCRSSGECLTLAHRCNGRQDCVDRSDEQD-CDEEGHKHKPKVMCGPRQFACHNAEACV 1113
Query: 219 PESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+ +CDG DC D SDE + C Q+ C + KC+ + +CD + DC
Sbjct: 1114 DKDKRCDGHKDC-PDNSDEQHCLQFDKTRSCHVHQLACD-NGKCVDQSLMCDGKNDCG-- 1169
Query: 275 DIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DNTDED D C G QC+ + CI +W CD +DCS D D D+ +
Sbjct: 1170 ---DNTDEDKAKCDSPANCDQGMFQCS-NGACIAASWECDGRIDCS--DASDEHDKCGHR 1223
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNNKADCENLKCS 388
C P+ RC QC+ CDG DC + DE G + KA+
Sbjct: 1224 R-------CPPDMHRC-LLGQCLDRRLVCDGHNDCGDLSDELNCGSGAHAKANISCGSLL 1275
Query: 389 HKCSPTPRGAMCFCPA 404
++C+ + +C PA
Sbjct: 1276 YQCASNLK--LCLDPA 1289
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G+ +P+V++NI WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 553 IVRASMDGKRSTPIVSENIHWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 612
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 613 MLKHPYGL 620
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 19/156 (12%)
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFN 292
D N + + + +C S +C+ C+ DC + DE+ K C
Sbjct: 1042 DASNRSCLEALDCEFRCRSSGECLTLAHRCNGRQDCVDRSDEQDCDEEGHKHKPKVMCGP 1101
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCG 348
Q C ++ C+ + CD DC DN+DE +DK S CH ++L C
Sbjct: 1102 RQFACHNAEACVDKDKRCDGHKDCP-----DNSDEQHCLQFDKTRS-----CHVHQLAC- 1150
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCE 383
+ +CV S CDGK DC + DE C++ A+C+
Sbjct: 1151 DNGKCVDQSLMCDGKNDCGDNTDEDKAKCDSPANCD 1186
>gi|355750521|gb|EHH54848.1| hypothetical protein EGM_03938, partial [Macaca fascicularis]
Length = 4485
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 125/402 (31%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 772 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQVDQFSCGNGRCIPRAW 830
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 831 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 890
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 891 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 949
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
CIP W CD E DC D
Sbjct: 950 GNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1009
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1010 DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCD-ECS 1063
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1064 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1123
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1124 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1162
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 168/401 (41%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C FSC G+CI +W CDG
Sbjct: 2530 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILTTWICDG 2589
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2590 QQDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2644
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2645 V-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2702
Query: 340 CHPNEL---------------------RCGSS------NQCVALSKF-CDGKPDCSNGED 371
C P + +CG+ +C+ +++ CDG DC + D
Sbjct: 2703 CIPKQFVCDHDDDCGDGSDESSQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCPDHSD 2762
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P CNNK DC +
Sbjct: 2763 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVS 2822
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 2823 GCSQDCQDLPISYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTD 2881
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 2882 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 2919
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3203 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3261
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3262 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3315
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3316 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3365
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3366 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3393
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 138/376 (36%), Gaps = 124/376 (32%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3409 ANGDCVSSRFWCDGDFDCADGSDERN-CEISCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 3466
Query: 234 GSDEPN----------------------------------------TCIHQCFNGQVQCA 253
G DE + C+ +C Q +C
Sbjct: 3467 GEDEKSCEPXXXXXXXXXXXXXXXXXXXXXXXXXXKLQCPFVFEQMDCVTECKEDQFRCK 3526
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHN 307
CIP WLCD DC VD +DE+ C G C + C H+
Sbjct: 3527 NKAHCIPIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHS 3576
Query: 308 WLCDEEMDCS--------------------------------------TDDIVDNTDEDW 329
W+CD E DC DD DN+DED
Sbjct: 3577 WVCDGEDDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDH 3636
Query: 330 -DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF-------- 375
++ A C +E C S+ +C+ + CD DC +G DE P
Sbjct: 3637 CTGKLTYKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNV 3695
Query: 376 --CNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTN 431
C + A+C +K S C C G +N QC D +ECL+ G+C C N
Sbjct: 3696 NPCGDDANCNQIKTS---------VFCRCKPGFQRNMKHRQCEDLNECLVFGTCSHQCIN 3746
Query: 432 THLSYVCSCTEGYTLR 447
SY C C + + R
Sbjct: 3747 VEGSYKCVCDQNFQER 3762
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 769 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQVDQFSCG-NGRCIP 827
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 828 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 887
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 888 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 944
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 945 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1004
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1005 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGDLCDECSL 1064
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1065 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1102
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3281 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3340
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3341 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3393
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + + C
Sbjct: 3394 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEISCSK 3441
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3442 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 3470
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3243 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3301
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3302 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3355
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3356 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3404
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3405 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3432
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 2/104 (1%)
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+C+ L C +KC+ C+C G + C D DEC + G+C QTC NTH SY C
Sbjct: 5 NCQQLNCQYKCTMVGNSTRCYCENGFEIKEDGRSCKDQDECAVYGTCSQTCRNTHGSYTC 64
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC EGY ++ D +SC A P D P ++ ++ I +LNGS
Sbjct: 65 SCVEGYLMQSDNRSCKAKIEPTDRPPILLIANFETIEIFYLNGS 108
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 107/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2449 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2507
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2508 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2565
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI W+CD + DC D DE H C N+ C
Sbjct: 2566 HKCEENYFSCP-SGRCILTTWICDGQQDCE-----DGLDE------FHCDSSCSWNQFAC 2613
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2614 -SAQKCISKHWICDGEDDCGDGLDESDSICGAVTCAADMFSCQGSHACVPRHWLCDGERD 2672
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2673 CPNGSDELSTAGCAPNNT 2690
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 101/283 (35%), Gaps = 84/283 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3322 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3381
Query: 225 DGFVDCLE--------------------------------------DGSDEPNTCIHQCF 246
D DC + DGSDE N C C
Sbjct: 3382 DSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSRFWCDGDFDCADGSDERN-CEISCS 3440
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD------------------------- 281
Q QC+ + +CIP W CD DC + + +
Sbjct: 3441 KDQFQCS-NGQCIPAKWKCDGHEDCKYGEDEKSCEPXXXXXXXXXXXXXXXXXXXXXXXX 3499
Query: 282 ----------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
E D +C Q +C CIP WLCD DC VD +DE+
Sbjct: 3500 XXKLQCPFVFEQMDCVTECKEDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE--- 3551
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+C +E C +S C S CDG+ DC + DE P
Sbjct: 3552 NCDRGGNICRADEFLCNNS-LCKLHSWVCDGEDDCGDNSDEAP 3593
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2401 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2460
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2461 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2514
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2515 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2557
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 537 VVDPINGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 596
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 597 WCDAYYDHIEKVFLNGTHRKIVYSGREL 624
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 130/366 (35%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3009 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3068
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGS + PN+ G +AL+ F DGK
Sbjct: 3069 YVNHRLYWADE--NHIEFSNMDGSRRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3120
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDGS 235
++G D N+ P+ K ++ L G
Sbjct: 3121 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGK 3180
Query: 236 DEPNTC-------------IHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
C + C Q +C + KCIP W CD DC
Sbjct: 3181 THTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3239
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3240 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3299
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3300 LRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3349
Query: 368 NGEDEG 373
+ DE
Sbjct: 3350 DASDEA 3355
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 3938 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSIVSVSS 3997
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 3998 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4032
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 117/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2230 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2289
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2290 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2349
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C +G V+C G E N C+ + + +C + +
Sbjct: 2350 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECG-NGE 2408
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 2409 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 2462
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2463 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2508
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2509 ----KNCNNTDCTH 2518
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 934 HSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKG-CNGTIRLCDHKTKFSCWST 992
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 993 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDC 1049
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G H V+
Sbjct: 1907 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGHREVV 1964
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 236 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRHAIIQ 295
Query: 167 PNELR 171
++R
Sbjct: 296 GRQVR 300
>gi|149062639|gb|EDM13062.1| very low density lipoprotein receptor [Rattus norvegicus]
Length = 503
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/362 (32%), Positives = 166/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCSDQSDESLEQCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 231 RQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 280 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDITKVC 338
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ + DC N CSH C G C C AG + ++ C D D
Sbjct: 339 DQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 399 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 158/388 (40%), Gaps = 95/388 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSHKCSPTPRGA--------------- 398
CDG PDC +G DE C ++ +CE+ C H S G
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHG-SRQCNGIRDCVDGSDEVNCKNV 315
Query: 399 -MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTH 433
C P +C+D +ECL+ +G C C +
Sbjct: 316 NQCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLV 375
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
+ Y C C G+ L D K+C ++ Q+
Sbjct: 376 IGYECDCAAGFEL-IDRKTCGDIDECQN 402
>gi|339253830|ref|XP_003372138.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
gi|316967501|gb|EFV51917.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
Length = 828
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/363 (31%), Positives = 153/363 (42%), Gaps = 58/363 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC-NAECTPGQFSCGMGKCIPESW 222
C + RC +C+ L+ CD PDC +G DE C C +FSC +CIP+ W
Sbjct: 7 CPSDHFRCHLDGKCIPLTWVCDSHPDCVDGSDELSNMCVKHPCNETEFSCKNERCIPKEW 66
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CD DC D SDE + C + C QC S KCIP++++CD +MDCS N +
Sbjct: 67 ECDRDDDC-GDNSDEHDKCSYHCDPKSFQCVESGKCIPYDYVCDGQMDCSDRSDEMNCKQ 125
Query: 283 DWDKF-----------HQCFNG--------------------------QVQCALSKKCIP 305
K QC +G +CA K+CIP
Sbjct: 126 HMTKLLSEQHGCRAHEFQCHDGACISERFVCDGDVDCPDMSLNNCSALHFRCASGKECIP 185
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ C+ DC+ N + H C + CG+ C+ CDGK D
Sbjct: 186 SVYRCNGRADCADGSDEKNCASESVGEVKH----CSAKQFDCGNGF-CIDWDVVCDGKQD 240
Query: 366 CSNGE--DEGPFCN----NKADCENLKCSHKCSPTPRGAMCFCPAGQN---PNKTQCVDA 416
C + DE PF N C+ C C+ TP G C C G N QC D
Sbjct: 241 CPGYKVVDEEPFLNCSLKGTDFCKEKPCEQLCTNTPIGPQCSCRPGYTVSLTNPKQCNDI 300
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
+EC G C Q C NT SYVC C Y L + +SC A N PQ A ++ ++ + IR+
Sbjct: 301 NECNTAGKCSQICINTIGSYVCKCHGDYVLLNNKRSCRA-NGPQ---AKLLLTNRLSIRQ 356
Query: 477 IHL 479
L
Sbjct: 357 FGL 359
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCALS 300
H C + +C L KCIP W+CD DC VD +DE + H C + C +
Sbjct: 5 HDCPSDHFRCHLDGKCIPLTWVCDSHPDC-----VDGSDELSNMCVKHPCNETEFSCK-N 58
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
++CIP W CD + DC DN+DE DK H C P +C S +C+ C
Sbjct: 59 ERCIPKEWECDRDDDCG-----DNSDEH-DKCSYH----CDPKSFQCVESGKCIPYDYVC 108
Query: 361 DGKPDCSNGEDE 372
DG+ DCS+ DE
Sbjct: 109 DGQMDCSDRSDE 120
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
P+++ N+ P L +D+ D++YW D+ L+T+ +DG L H
Sbjct: 432 PIISNNVSSPDGLAVDWIHDLIYWTDTGLDTISVATLDGKLRHTLIH 478
>gi|432936061|ref|XP_004082101.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Oryzias latipes]
Length = 4429
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 101/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C G+ C + CIP WLCD E DC DN+DE + C N ++C
Sbjct: 32 CDVGEFLCHNQETCIPEAWLCDGEPDCP-----DNSDESDGVCVQEVEIRCPLNHIQCLG 86
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--Q 406
+ +C+ +K C+G DC +G DEG C + C L+C + C T G CFC G
Sbjct: 87 TKKCIHFNKLCNGARDCEDGFDEGVHCRELLSACHELRCRYGCVMTRNGTFCFCADGFEV 146
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ T C D DEC G+C QTCTNT+ SY CSCTEGY L+PDG+SC A P D +
Sbjct: 147 GEDGTSCRDHDECATYGACSQTCTNTYGSYRCSCTEGYILQPDGRSCKAKQDPGDSYPLL 206
Query: 467 IFSSTVDIRRIHLNGS 482
+ I HLNG+
Sbjct: 207 LIGGPDRIVITHLNGT 222
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 142/293 (48%), Gaps = 31/293 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--------IHQCFNGQVQC 252
C C+ QF CG G+CIP W CDG DC D SDE +TC + +C + C
Sbjct: 1008 CIQTCSNNQFQCGSGRCIPSHWACDGDNDC-GDFSDENSTCRGGSALLPVIECGREEFYC 1066
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
CIP W CD + DC +D D D + K + C + KCI +W+CD
Sbjct: 1067 VADGTCIPERWRCDGDKDC--EDGSDEKDCEGTKRMCDPKAKFTCKDTGKCITKSWVCDG 1124
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGED 371
++DC D++DE+ S + +C P C + ++ C+ K C+GK DC++ D
Sbjct: 1125 DIDCE-----DHSDEE-----SCESSVCKPPRYPCANDTSMCLTPDKICNGKVDCADRSD 1174
Query: 372 EGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQ 427
EG C + CSH+C+ P +G +C CP G + NKT C D C C Q
Sbjct: 1175 EGAVC-DMCLVARGGCSHQCTVAPGKGVVCSCPPGLHLDSSNKT-CEVVDYCSRHLKCSQ 1232
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C + CSC G+TL DG SC + + + A IIFS +IRRI L+
Sbjct: 1233 VCEQYKTTVKCSCYPGWTLDSDGDSCHSTDPFE---AFIIFSIRHEIRRIDLH 1282
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 161/337 (47%), Gaps = 42/337 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN-AECTPGQFSC-GMGKCIPES 221
C N+ C S N+C+A CDG+ DC +G DE C C PG FSC G C+P+
Sbjct: 2553 CLWNQFAC-SKNKCIAKQWLCDGENDCEDGLDESVQICGTVTCAPGLFSCPGSYACVPKR 2611
Query: 222 WKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
W CDG DC DGSDE PN + C + +C +K C+P ++CD + DC
Sbjct: 2612 WLCDGERDC-PDGSDELAAAGCAPN---NTCDDSSFRCR-NKACVPQRFVCDHDNDCG-- 2664
Query: 275 DIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKY 332
D +DE + + C + + +C + + W CD DC D +DE +
Sbjct: 2665 ---DGSDESVECVYRSCGSEEFRCGDGRCLLSSQWECDGYADCP-----DRSDELPLNLK 2716
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSH 389
LC+ + C S+ +C++ CDGK DC +G DE N +C N + C+
Sbjct: 2717 CLAAGSLCNGSFFMC-SNGRCISEGNLCDGKDDCGDGSDERNC--NVNECLNRRVSGCTQ 2773
Query: 390 KCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-T 445
C G C C G ++ KT CVD DEC C Q C NT+ S+ C C +GY
Sbjct: 2774 DCQDLTVGYKCKCWPGFHLKDDGKT-CVDIDECSTILPCSQRCINTYGSFRCLCVDGYEA 2832
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L + +C AV+ E +I + +IR++ ++GS
Sbjct: 2833 LDRNPNTCKAVSA---EEPFLIMADHHEIRKLSVDGS 2866
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 136/342 (39%), Gaps = 69/342 (20%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ C S++ C+ S CDG DC + DE +C G F+C G CI W CDG
Sbjct: 2477 ISCNSTSLCIHPSWVCDGANDCGDYADETNCQVSQGQKCEEGHFACPGGNCISSVWLCDG 2536
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG+DE C C Q C+ KCI WLCD E DC +D +D + +
Sbjct: 2537 QKDC-EDGADEFQ-CDSSCLWNQFACS-KNKCIAKQWLCDGENDC--EDGLDESVQICGT 2591
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV------DNTDEDWDKYFSHNAV 338
C G C S C+P WLCD E DC +D++ +NT +D + A
Sbjct: 2592 V-TCAPGLFSCPGSYACVPKRWLCDGERDCPDGSDELAAAGCAPNNTCDDSSFRCRNKAC 2650
Query: 339 L--------------------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C E RCG ++ CDG DC + DE
Sbjct: 2651 VPQRFVCDHDNDCGDGSDESVECVYRSCGSEEFRCGDGRCLLSSQWECDGYADCPDRSDE 2710
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS-------- 424
P NLKC S G+ C G+ ++ D + DGS
Sbjct: 2711 LPL--------NLKCLAAGSLC-NGSFFMCSNGRCISEGNLCDGKDDCGDGSDERNCNVN 2761
Query: 425 ---------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C + + Y C C G+ L+ DGK+C ++
Sbjct: 2762 ECLNRRVSGCTQDCQDLTVGYKCKCWPGFHLKDDGKTCVDID 2803
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 131/296 (44%), Gaps = 46/296 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------------- 147
D + A M G R + + +IQ +L + +D +YW D
Sbjct: 3026 DNHILFANMDGTQRHKVSSDHIQGVMALTL--FEDFVYWTDGKSKSLRRAHKTMGSQGIE 3083
Query: 148 -LNTVESVRVDGSHNA-----VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEG 198
LN+ ++++ +++ V H ++ G + LS + K C +
Sbjct: 3084 LLNSWQAIKSIKVYHSLRQPEVPKHQCQIANGGCSHLCLLSPGGEHKCACPTNFYLAADN 3143
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF CG +CIP WKCD DC DGSDEP C +C G+ QC
Sbjct: 3144 KTCLSNCTSSQFRCGTDECIPFWWKCDTVDDC-GDGSDEPADCPEFKCQPGRFQCGTGLC 3202
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DNTDE + + C +GQ +C +KCIP N C+ + DC
Sbjct: 3203 ALP-PFICDGENDCG-----DNTDEANCETYICLSGQFKCTRKQKCIPLNLRCNGQDDCG 3256
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D D TD C P++ +C +S C++ CD PDC++G DE
Sbjct: 3257 --DGEDETD--------CPESTCSPDQFQCKASMHCISKLWVCDEDPDCADGSDEA 3302
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3269 CSPDQFQCKASMHCISKLWVCDEDPDCADGSDEANCDEKTCGPHEFRCENNNCIPDHWRC 3328
Query: 225 DGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
D DC DGSDE P TC H+ F CA + +CI + CD + DC +DN+
Sbjct: 3329 DSQNDC-GDGSDENNCKPVTCNHKDF----ACA-NGECISSRFRCDGDYDC-----LDNS 3377
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE+ + H C + Q QC + CI W+CD + DC ED + C
Sbjct: 3378 DENGCEAH-CADDQFQCH-NNYCISLKWVCDGQEDC-------KMGEDEKNCQATAVPSC 3428
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
NE C S CV+ S CDG +C +G DE
Sbjct: 3429 SVNEYVCASGG-CVSASLRCDGHDNCLDGSDE 3459
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/340 (27%), Positives = 142/340 (41%), Gaps = 76/340 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG----QFSCGMGKCIPE 220
C ++ +C +N C++L CDG+ DC GEDE C A P ++ C G C+
Sbjct: 3386 CADDQFQC-HNNYCISLKWVCDGQEDCKMGEDE-KNCQATAVPSCSVNEYVCASGGCVSA 3443
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S +CDG +CL DGSDE C+ +C + C CIP W CD+ +DC +D++
Sbjct: 3444 SLRCDGHDNCL-DGSDEIG-CVKECREDEFLCLNRAHCIPRRWRCDDVLDC-----MDHS 3496
Query: 281 DEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCS----------------- 317
DE+ C +G C + C H W+CD + DC
Sbjct: 3497 DEE-----DCSHGATFCRADEFICNNTLCKLHIWVCDGKDDCGDNSDEDIDMCVKLPCPP 3551
Query: 318 ---------------------TDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVA 355
DD DN+DE+ + + C E C S+ +C+
Sbjct: 3552 TRPFRCRNDHVCLRTDQVCNKVDDCGDNSDEEQCAEVVAGRPRPCGKTEFTC-SNRRCIP 3610
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP---------TPRGAMCFCPAG- 405
+ CD DC +G + C + E++ C K +P T A+C C G
Sbjct: 3611 MQLQCDLFNDCGDGGSDEQDCKSCEHGEHV-CGKKTNPCGEDAICNQTNVNAVCQCKPGF 3669
Query: 406 -QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+N N C + +EC+ +C CTNT S+ C+C Y
Sbjct: 3670 KRNQNTGLCEEINECVQFDTCPHYCTNTKGSFKCTCDRNY 3709
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CVA S+FCDG DC + DE N C + SC G CIP S C+ +DC D SD
Sbjct: 2396 RCVANSRFCDGFDDCGDNSDEAFCGNITCGSSESSCKDGSCIPSSVWCNQVIDC-PDASD 2454
Query: 237 EPN----TCIHQCFNGQ-----VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G + C + CI +W+CD DC D D T+ +
Sbjct: 2455 EKNCNHTDCSHFYKLGVKERDFISCNSTSLCIHPSWVCDGANDCG--DYADETNCQVSQG 2512
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C G C CI WLCD + DC D DE F ++ C N+ C
Sbjct: 2513 QKCEEGHFACP-GGNCISSVWLCDGQKDCE-----DGADE-----FQCDSS-CLWNQFAC 2560
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S N+C+A CDG+ DC +G DE
Sbjct: 2561 -SKNKCIAKQWLCDGENDCEDGLDE 2584
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 145/384 (37%), Gaps = 73/384 (19%)
Query: 32 STDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL 91
S D I +N D Y K I + +Q+ + + N+S R A + D L
Sbjct: 612 SVDWIGNNLYWTNDGYRKTIS------VARLENASQTRKTLLEGNMSHPR---AIVVDPL 662
Query: 92 NSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
NSW D E+ R+EKA M G NR VT N+ WP+ L +D++ ++WCD++
Sbjct: 663 NSWMYWTDWEEDEVNDSIGRIEKAWMDGSNRGIFVTSNMLWPNGLTLDHSTSTMFWCDAY 722
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD------------GKPDCSNGE 195
+ +E + ++GS V+ EL N +S + D + D S G+
Sbjct: 723 YDHIEKIHLNGSGRMVVYRGKEL-----NHPFGISHYGDFIFWTEYMNASVFQLDLSTGD 777
Query: 196 ------DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
+ P Q G C C + G + C + Q
Sbjct: 778 VTLLRSERPPLFGLRVYDAQSQQGDNACSVNYGGCATLCLAIPGGR------VCACADNQ 831
Query: 250 ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNT----------DEDWDKFHQCFN- 292
V CA S + +E C + + D ++ H C+N
Sbjct: 832 VLEKNNVTCAASSSSLEPQRCKSDEFQCHNQRCIRSVWKCDGDDDCLDGSDEERHICYNH 891
Query: 293 ----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
Q +C+ + +CIP WLCD DC ++ N + +A C ++ C
Sbjct: 892 TCPADQFKCS-NNRCIPKRWLCDGANDCGNNEDEANA--------TCSARPCQADQFSC- 941
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ +C+ CD + DC + DE
Sbjct: 942 QNGRCIPRGWSCDREDDCGDMSDE 965
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E++ M G R L+ KN++ P+ L IDY +YW D L+ + S+R+DGS
Sbjct: 3888 IEESAMDGSLRRVLLEKNLRRPTGLTIDYFNQRIYWADPELSLIGSMRLDGS 3939
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++C+ ++ CD
Sbjct: 2348 EFECGNGECINYQLTCDGVAHCKDKSDEKMQYCDNRSCRSGFRPCYNQRCVANSRFCDGF 2407
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIV 322
DC DN+DE F G + C S+ CIP + C++ +DC
Sbjct: 2408 DDCG-----DNSDE-------AFCGNITCGSSESSCKDGSCIPSSVWCNQVIDCPDASDE 2455
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N + +F V + + C S++ C+ S CDG DC + DE
Sbjct: 2456 KNCNHTDCSHFYKLGVK-ERDFISCNSTSLCIHPSWVCDGANDCGDYADE 2504
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ LV I+ P+++ +D + ++YW D++L+ ++ V G + + H
Sbjct: 350 KIERCNMDGTNRTRLVDHRIEQPTAVALDVIKKLVYWADAYLDYIDVVDYQGKNRHTIAH 409
Query: 167 PNE 169
++
Sbjct: 410 GSQ 412
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 205 CTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCI 259
C G+F C CIPE+W CDG DC ++ + C+ + C +QC +KKCI
Sbjct: 32 CDVGEFLCHNQETCIPEAWLCDGEPDCPDNSDESDGVCVQEVEIRCPLNHIQCLGTKKCI 91
Query: 260 PHNWLCDEEMDC 271
N LC+ DC
Sbjct: 92 HFNKLCNGARDC 103
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE----CTPGQFSC-GMG 215
A+LC E C + C+ + CDG+PDC + DE C E C C G
Sbjct: 29 AILCDVGEFLCHNQETCIPEAWLCDGEPDCPDNSDESDGVCVQEVEIRCPLNHIQCLGTK 88
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTC 241
KCI + C+G DC EDG DE C
Sbjct: 89 KCIHFNKLCNGARDC-EDGFDEGVHC 113
>gi|301767446|ref|XP_002919140.1| PREDICTED: very low-density lipoprotein receptor-like [Ailuropoda
melanoleuca]
Length = 931
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 165/361 (45%), Gaps = 63/361 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S C+ +S CDG+ DC +G+DE N C+P +F+C G+CI ++
Sbjct: 171 CRRNEMSCGARSAHCIPVSWKCDGENDCDSGKDEENCGNITCSPDEFTCSSGRCISRNFV 230
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD+E DC+ +D+ ++
Sbjct: 231 CNGQDDC-GDGSDELDCAPPTCRTHEFQCSNSS-CIPLSWVCDDEADCANQSDESLEQCG 288
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED------------- 328
+C + QC S +CI W CD + DC D +DE
Sbjct: 289 HQPVMDTKCPASETQCG-SGECIHKKWRCDGDHDCK-----DGSDEVNCPSKTCRPDQFG 342
Query: 329 -WDKYFSHNAVLC--------HPNELRCGSSNQCVALSKFCDGKPDCSNGE--DEGPFCN 377
D H++ C +E+ C + NQC+ KF C +GE D G CN
Sbjct: 343 CEDGSCIHSSRRCNGIRDCVDRSDEVNCKNVNQCLGPGKF-----KCRSGECIDIGKVCN 397
Query: 378 NKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADE 418
+ DC N CSH C G C C AG + +K C D DE
Sbjct: 398 QEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKTCGDIDE 457
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 458 CQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKID 513
Query: 479 L 479
L
Sbjct: 514 L 514
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 155/390 (39%), Gaps = 101/390 (25%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R + C P++ +C ++ +C+ L CDG+ DC++G DE C F C
Sbjct: 81 RATEAGRKAKCEPSQFQC-TNGRCIMLLWKCDGEEDCADGSDEKNCVKKTCAESDFVCNN 139
Query: 215 GKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 271
G+CIP W+CDG DC EDGSDE P C + C ++ C A S CIP +W CD E DC
Sbjct: 140 GQCIPNRWQCDGDPDC-EDGSDENPEECHMRACRRNEMSCGARSAHCIPVSWKCDGENDC 198
Query: 272 ST----------------------------------DDIVDNTDEDWDKFHQCFNGQVQC 297
+ DD D +DE C + QC
Sbjct: 199 DSGKDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCGDGSDELDCAPPTCRTHEFQC 258
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHPNELRCGSSNQCV 354
+ S CIP +W+CD+E DC+ + +DE ++ H V+ C +E +CGS +C+
Sbjct: 259 SNS-SCIPLSWVCDDEADCA-----NQSDESLEQ-CGHQPVMDTKCPASETQCGSG-ECI 310
Query: 355 ALSKFCDGKPDCSNGEDE-----------------------GPFCNNKADCENLKCSHKC 391
CDG DC +G DE CN DC + C
Sbjct: 311 HKKWRCDGDHDCKDGSDEVNCPSKTCRPDQFGCEDGSCIHSSRRCNGIRDCVDRSDEVNC 370
Query: 392 SPTPRGAMCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQ 427
+ C P +C+D +ECL+ +G C
Sbjct: 371 KNVNQ---CLGPGKFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSH 427
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C + + Y C C G+ L D K+C ++
Sbjct: 428 ICKDLVIGYECDCAAGFEL-IDKKTCGDID 456
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++ + + +S L + L NS L P +D
Sbjct: 575 AIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNS-GLREPASIAVDPLSGFVYWSDW 633
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R PLVT++IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 634 GEPAKIEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRR 693
Query: 163 VLCHPNEL 170
++ E
Sbjct: 694 IVLKSQEF 701
>gi|2764400|emb|CAA03855.1| lipophorin receptor [Locusta migratoria]
Length = 883
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 123/369 (33%), Positives = 163/369 (44%), Gaps = 74/369 (20%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C +E C ++ +CV L+ CD PDCS+G DE CN C +F+C KCI
Sbjct: 131 CASDEFTCRTAPGECVPLAWMCDDNPDCSDGSDEKA-CNETCRSDEFTCANSKCIQQRWV 189
Query: 219 ----------------------PES--------------WKCDGFVDCLEDGSDEPNTC- 241
PE+ W+CDG +DC +DGSDE
Sbjct: 190 CDRDDDCGDGSDEKDCPKTTCAPETEFNCSDNNMCITARWQCDGDLDC-QDGSDEQGCTS 248
Query: 242 ---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQ 296
I C + +C CI +W+CD + DC D +DED + H C Q Q
Sbjct: 249 TGPISHCLPREFECLDRMTCIHQSWVCDGDRDCP-----DGSDEDVSRCHNMTCRPDQFQ 303
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVA 355
C ++ CIP + C DCS D +DE+ + C P E CG C+
Sbjct: 304 CR-NRICIPGHLHCSGHADCS-----DGSDEE---NCTSPVPKCDPKTEFECGGG-MCIP 353
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFC-PAGQNPNKTQ 412
LS CD KPDC N EDE K +C N CS KC TP G C C P + +
Sbjct: 354 LSSVCDKKPDCPNWEDEPQEKCGKNECAVNNGGCSQKCVDTPAGYYCDCLPGYKLVDNHT 413
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSST 471
C D +EC I G+C Q C N ++ C C EGY P D C A+ + AS++F+
Sbjct: 414 CDDVNECEIPGACSQECINEKGTFKCQCVEGYLRDPRDPTRCKAM----EGHASLLFARR 469
Query: 472 VDIRRIHLN 480
DIR+I L+
Sbjct: 470 HDIRKISLD 478
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 147/384 (38%), Gaps = 104/384 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC--NAECTPGQFSCGMGKCIPES 221
C + +C ++ C+ L+ C+G+ DC + DE C ECT +F C G+CIP
Sbjct: 48 CTLRQFQC-ANGHCIPLTWMCEGEDDCGDNSDETNAVCKETRECTDQEFRCNNGRCIPSH 106
Query: 222 WKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALSK-KCIPHNWLCDEEMDCS--TDDI 276
W+CD DC DGSDE P C +C + + C + +C+P W+CD+ DCS +D+
Sbjct: 107 WQCDNEKDCA-DGSDEIPQVCQQKKCASDEFTCRTAPGECVPLAWMCDDNPDCSDGSDEK 165
Query: 277 VDNTDEDWDKFHQCFNG---------------------------------QVQCALSKKC 303
N D+F C N + C+ + C
Sbjct: 166 ACNETCRSDEF-TCANSKCIQQRWVCDRDDDCGDGSDEKDCPKTTCAPETEFNCSDNNMC 224
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
I W CD ++DC D +DE SH C P E C C+ S C
Sbjct: 225 ITARWQCDGDLDCQ-----DGSDEQGCTSTGPISH----CLPREFECLDRMTCIHQSWVC 275
Query: 361 DGKPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC-SPT 394
DG DC +G DE C+ ADC + C SP
Sbjct: 276 DGDRDCPDGSDEDVSRCHNMTCRPDQFQCRNRICIPGHLHCSGHADCSDGSDEENCTSPV 335
Query: 395 PR----------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
P+ G MC CP ++ + +C + + +G C Q C +T
Sbjct: 336 PKCDPKTEFECGGGMCIPLSSVCDKKPDCPNWEDEPQEKCGKNECAVNNGGCSQKCVDTP 395
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVN 457
Y C C GY L D +C VN
Sbjct: 396 AGYYCDCLPGYKLV-DNHTCDDVN 418
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 90/206 (43%), Gaps = 42/206 (20%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKC 258
++ CT QF C G CIP +W C+G DC D SDE N +C + + +C + +C
Sbjct: 45 DSACTLRQFQCANGHCIPLTWMCEGEDDC-GDNSDETNAVCKETRECTDQEFRCN-NGRC 102
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSK-KCIPHNWLCDEEMD 315
IP +W CD E DC+ D +DE Q C + + C + +C+P W+CD+ D
Sbjct: 103 IPSHWQCDNEKDCA-----DGSDEIPQVCQQKKCASDEFTCRTAPGECVPLAWMCDDNPD 157
Query: 316 CS--TDDIVDNTDEDWDKYFSHNA--------------------------VLCHP-NELR 346
CS +D+ N D++ N+ C P E
Sbjct: 158 CSDGSDEKACNETCRSDEFTCANSKCIQQRWVCDRDDDCGDGSDEKDCPKTTCAPETEFN 217
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C +N C+ CDG DC +G DE
Sbjct: 218 CSDNNMCITARWQCDGDLDCQDGSDE 243
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +R +V+ ++WP+ L +D + +YW D+ LN + S DGS V+ +
Sbjct: 601 KIERAGMDGAHRQTIVSYEVKWPNGLTLDLVKRRVYWVDAKLNVISSCNYDGSGRRVILY 660
Query: 167 PNE 169
E
Sbjct: 661 SPE 663
>gi|281349309|gb|EFB24893.1| hypothetical protein PANDA_007732 [Ailuropoda melanoleuca]
Length = 837
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/361 (32%), Positives = 165/361 (45%), Gaps = 63/361 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S C+ +S CDG+ DC +G+DE N C+P +F+C G+CI ++
Sbjct: 86 CRRNEMSCGARSAHCIPVSWKCDGENDCDSGKDEENCGNITCSPDEFTCSSGRCISRNFV 145
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD+E DC+ +D+ ++
Sbjct: 146 CNGQDDC-GDGSDELDCAPPTCRTHEFQCSNSS-CIPLSWVCDDEADCANQSDESLEQCG 203
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED------------- 328
+C + QC S +CI W CD + DC D +DE
Sbjct: 204 HQPVMDTKCPASETQCG-SGECIHKKWRCDGDHDCK-----DGSDEVNCPSKTCRPDQFG 257
Query: 329 -WDKYFSHNAVLC--------HPNELRCGSSNQCVALSKFCDGKPDCSNGE--DEGPFCN 377
D H++ C +E+ C + NQC+ KF C +GE D G CN
Sbjct: 258 CEDGSCIHSSRRCNGIRDCVDRSDEVNCKNVNQCLGPGKF-----KCRSGECIDIGKVCN 312
Query: 378 NKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADE 418
+ DC N CSH C G C C AG + +K C D DE
Sbjct: 313 QEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDKKTCGDIDE 372
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 373 CQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKID 428
Query: 479 L 479
L
Sbjct: 429 L 429
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 157/377 (41%), Gaps = 95/377 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C ++ +C+ L CDG+ DC++G DE C F C G+CIP W+C
Sbjct: 6 CEPSQFQC-TNGRCIMLLWKCDGEEDCADGSDEKNCVKKTCAESDFVCNNGQCIPNRWQC 64
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE P C + C ++ C A S CIP +W CD E DC +
Sbjct: 65 DGDPDC-EDGSDENPEECHMRACRRNEMSCGARSAHCIPVSWKCDGENDCDSGKDEENCG 123
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC+ S CIP +
Sbjct: 124 NITCSPDEFTCSSGRCISRNFVCNGQDDCGDGSDELDCAPPTCRTHEFQCSNS-SCIPLS 182
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKP 364
W+CD+E DC+ + +DE ++ H V+ C +E +CGS +C+ CDG
Sbjct: 183 WVCDDEADCA-----NQSDESLEQ-CGHQPVMDTKCPASETQCGSG-ECIHKKWRCDGDH 235
Query: 365 DCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPA 404
DC +G DE C ++ CE+ C H +C+ C P
Sbjct: 236 DCKDGSDEVNCPSKTCRPDQFGCEDGSCIHSSRRCNGIRDCVDRSDEVNCKNVNQCLGPG 295
Query: 405 GQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSC 440
+C+D +ECL+ +G C C + + Y C C
Sbjct: 296 KFKCRSGECIDIGKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDC 355
Query: 441 TEGYTLRPDGKSCTAVN 457
G+ L D K+C ++
Sbjct: 356 AAGFEL-IDKKTCGDID 371
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C P QF C G+CI WKCDG DC DGSDE N C C + +CIP+
Sbjct: 4 AKCEPSQFQCTNGRCIMLLWKCDGEEDCA-DGSDEKNCVKKTCAESDFVCN-NGQCIPNR 61
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE+ ++ H C ++ C A S CIP +W CD E DC +
Sbjct: 62 WQCDGDPDCE-----DGSDENPEECHMRACRRNEMSCGARSAHCIPVSWKCDGENDCDSG 116
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+N + C P+E C SS +C++ + C+G+ DC +G DE
Sbjct: 117 KDEENC----------GNITCSPDEFTC-SSGRCISRNFVCNGQDDCGDGSDE 158
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++ + + +S L + L NS L P +D
Sbjct: 490 AIAVDWVYKTIYWTDVASKTISVATLDGTKRKFLFNS-GLREPASIAVDPLSGFVYWSDW 548
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R PLVT++IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 549 GEPAKIEKAGMNGFDRQPLVTEDIQWPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRR 608
Query: 163 VLCHPNEL 170
++ E
Sbjct: 609 IVLKSQEF 616
>gi|195167084|ref|XP_002024364.1| GL14843 [Drosophila persimilis]
gi|194107737|gb|EDW29780.1| GL14843 [Drosophila persimilis]
Length = 1512
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 115/373 (30%), Positives = 160/373 (42%), Gaps = 72/373 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMGKCIPES 221
CH ++L C + +CV S CDGK DC + DE A C G F C G CI S
Sbjct: 1020 CHVHQLAC-DNGKCVDQSLMCDGKNDCGDNTDEDKAKCDSPANCDQGMFQCSNGACIAAS 1078
Query: 222 WKCDGFVDCLEDGSDEPNTC--------IHQCFNGQ------------------------ 249
W+CDG +DC D SDE + C +H+C GQ
Sbjct: 1079 WECDGRIDC-SDASDEHDKCGHRRCPPDMHRCLLGQCLDRRLVCDGHNDCGDLSDELNCG 1137
Query: 250 --------VQC-ALSKKCIPHNWLC-DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+ C +L +C + LC D + C+ +++ D C + QC
Sbjct: 1138 SEAHAKANISCGSLLYQCTSNLKLCLDPAVRCNGTAECPRGEDEADCGDMCSINEFQCRT 1197
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDED---------WDKYFSHNAVLCHPNELRCGSS 350
K+CI + CD DC +D +DE+ K ++ + C P+ C
Sbjct: 1198 GKQCIRKEFHCDRARDC-----LDGSDEEACDKIQNQTLSKPWTTASRACRPHLFDC-QD 1251
Query: 351 NQCVALSKFCDGKPDCSNGEDEGP----FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
+CV +S+ C+ PDC NG DEGP C A C HKC TP GA+C C G
Sbjct: 1252 GECVDMSRVCNSFPDCQNGSDEGPQCATACRASAGGGRPVCQHKCRATPAGAVCSCFDGY 1311
Query: 407 NPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ Q CVD +ECL C Q C NT Y C C + LR D SC ++ A
Sbjct: 1312 RLDTDQRSCVDVNECLDGQPCAQICENTLGGYQCQCHADFMLRQDRVSCKSLQA----GA 1367
Query: 465 SIIFSSTVDIRRI 477
+++FSS ++R +
Sbjct: 1368 TLLFSSYNEVRNL 1380
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/329 (32%), Positives = 144/329 (43%), Gaps = 52/329 (15%)
Query: 184 FCDGKPDCSNGEDEGPFCNAECT-PGQFSCGM--GKCIPESWKCDGFVDCLEDGSDEPN- 239
CD + DC++ DE C P F C G C+ KC+G +C +G DE N
Sbjct: 1 MCDARSDCTDATDELDCDYKLCREPHWFPCAQPHGACLAAELKCNGIDNC-PNGEDEINC 59
Query: 240 ---------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDED 283
C + C + CIP + CD + DC+ + D +D E
Sbjct: 60 PSGILGMSSRFGSFRKLPRNCSASEYMCQRDRSCIPIEFQCDGKSDCADSSDELDGCKES 119
Query: 284 WD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LC 340
K H C NG+ L +K WLCD DD D +DE H V LC
Sbjct: 120 QASCKGHLCPNGRC---LQRK----QWLCD-----GVDDCGDGSDE-------HGCVDLC 160
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--SHKCSPTPR 396
P + C + C+ L+K CDG DCS+G DE CN+K DC C C P
Sbjct: 161 QPEMGKFMCRNKEHCLELAKVCDGHSDCSDGSDEYETCNSKPDCSAKSCPAGATCHMMPT 220
Query: 397 -GAMCFCPAGQNPNKTQ--CVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGK 451
GA C+CPAG K Q C D DEC S C Q+C NT Y CSC GY L D +
Sbjct: 221 DGAQCYCPAGFRLAKFQNKCEDIDECQERESELCSQSCENTSGGYRCSCDPGYLLAKDNR 280
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+C A N E +++++ +++ +HL
Sbjct: 281 TCRATNTHGSEHPLLLYTTQMNVMGMHLG 309
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 102/221 (46%), Gaps = 36/221 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---------CTPGQFSCGMGK-CI 218
E RC SS +C+ L+ C+G+ DC + DE C+ E C P QF+C + C+
Sbjct: 932 EFRCRSSGECLTLAHRCNGRQDCVDRSDEQD-CDEEGHKHKPKVMCGPRQFACHNAEACV 990
Query: 219 PESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+ +CDG DC D SDE + C Q+ C + KC+ + +CD + DC
Sbjct: 991 DKDKRCDGHKDC-PDNSDEQHCLQFDKTRSCHVHQLACD-NGKCVDQSLMCDGKNDCG-- 1046
Query: 275 DIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DNTDED D C G QC+ + CI +W CD +DCS D D D+ +
Sbjct: 1047 ---DNTDEDKAKCDSPANCDQGMFQCS-NGACIAASWECDGRIDCS--DASDEHDKCGHR 1100
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P+ RC QC+ CDG DC + DE
Sbjct: 1101 R-------CPPDMHRC-LLGQCLDRRLVCDGHNDCGDLSDE 1133
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G+ +P+V++NI WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 433 IVRASMDGKRSTPIVSENIHWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 492
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 493 MLKHPYGL 500
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 11/122 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIP-ESW 222
C +E C C+ + CDGK DC++ DE C ++ + C G+C+ + W
Sbjct: 80 CSASEYMCQRDRSCIPIEFQCDGKSDCADSSDELDGCKESQASCKGHLCPNGRCLQRKQW 139
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCF--NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC DGSDE + C+ C G+ C + C+ +CD DCS D +
Sbjct: 140 LCDGVDDC-GDGSDE-HGCVDLCQPEMGKFMCRNKEHCLELAKVCDGHSDCS-----DGS 192
Query: 281 DE 282
DE
Sbjct: 193 DE 194
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFN 292
D N + + + +C S +C+ C+ DC + DE+ K C
Sbjct: 919 DASNRSCLEALDCEFRCRSSGECLTLAHRCNGRQDCVDRSDEQDCDEEGHKHKPKVMCGP 978
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCG 348
Q C ++ C+ + CD DC DN+DE +DK S CH ++L C
Sbjct: 979 RQFACHNAEACVDKDKRCDGHKDCP-----DNSDEQHCLQFDKTRS-----CHVHQLAC- 1027
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCEN 384
+ +CV S CDGK DC + DE C++ A+C+
Sbjct: 1028 DNGKCVDQSLMCDGKNDCGDNTDEDKAKCDSPANCDQ 1064
>gi|449275178|gb|EMC84121.1| Low-density lipoprotein receptor-related protein 1B, partial [Columba
livia]
Length = 4583
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 159/341 (46%), Gaps = 53/341 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKP---DCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C P + +C++ CD DC +G DE C C+ QF C G+CIP
Sbjct: 944 CEPLTQFICRNGRCISSKWLCDSGKYHDDCGDGSDE-LGCVHSCSSDQFRCYNGRCIPSH 1002
Query: 222 WKCDGFVDCLEDGSDEPNT--------CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
W CDG DC D SDE T + +C + QC+ C+P W CD E DC
Sbjct: 1003 WACDGDNDC-GDFSDETKTNCSKEETPSLGRCNGKEFQCSPDGNCVPELWRCDGEKDCE- 1060
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQ---------CALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE + NG ++ C + +CI WLCD ++DC D
Sbjct: 1061 ----DGSDE------KGCNGTIRLCDEKTKFSCKSTGRCISKAWLCDGDIDCE-----DQ 1105
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+DED + +C P + C + ++ C+ K C+G+ DC +G DEG C+ +
Sbjct: 1106 SDED-----NCEGYMCGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDEGDLCD-ECSLN 1159
Query: 384 NLKCSHKCSPTPRG-AMCFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH+CS P G MC CPAG + NKT C D C C Q C + CS
Sbjct: 1160 NGGCSHQCSVVPGGRIMCSCPAGFSLSIDNKT-CEIMDYCTKHLKCSQVCEQHKNTIKCS 1218
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C EG+ L DG++C + + + A IIFS +IR+I L+
Sbjct: 1219 CYEGWKLSKDGENCVSTDPFE---AFIIFSIRHEIRKIDLH 1256
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 115/380 (30%), Positives = 165/380 (43%), Gaps = 75/380 (19%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2657 QNKPTCEENYFGC-PSGRCILTTWLCDGQKDCEDGVDE-LHCDSSCSWNQFACSANKCIS 2714
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC--STDD 275
+ W CDG DC DG DE + C C S C+P +WLCD E DC +D+
Sbjct: 2715 KQWTCDGEDDC-GDGLDESDAVCGSVTCAADTFSCLGSHACVPRHWLCDGERDCPNGSDE 2773
Query: 276 IV------DNT-DEDW-----------------------------------DKFHQCFNG 293
+ +NT DE+ ++ C G
Sbjct: 2774 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESLECGKYNKRYRHCRPG 2833
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS--- 350
+ CA + + W CD + DC D++DE + + C +E C SS
Sbjct: 2834 EFTCADGRCLLNSQWQCDGDFDCP-----DHSDE------APINIKCKSSEQSCNSSFFM 2882
Query: 351 ---NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG- 405
+CV + CD K DCS+G DE N+ + + CS C P G C C G
Sbjct: 2883 CKNGKCVPQTAVCDNKEDCSDGSDEKSCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGF 2942
Query: 406 --QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDE 462
++ KT CVD DEC C Q C NT+ +Y C C +GY ++PD C +++ DE
Sbjct: 2943 RLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCADGYEIQPDNLHGCKSLS---DE 2998
Query: 463 PASIIFSSTVDIRRIHLNGS 482
+I + +IR+I +GS
Sbjct: 2999 EPFLILADHHEIRKISTDGS 3018
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 101/206 (49%), Gaps = 20/206 (9%)
Query: 288 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
HQ C G+ C C+ WLCD E DC D++DE D V C PN +
Sbjct: 3 HQLCDVGEFLCRDGVSCVSQRWLCDGEPDCP-----DDSDESLDTCPEEVDVKCAPNYVN 57
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG 405
C +N+C+ LS+ C+G DCS+G DEG C C+ + C +KC+ T G C+C G
Sbjct: 58 CIGTNKCIHLSQLCNGVYDCSDGYDEGVHCRELLPKCQQMSCRYKCAITRNGTRCYCGDG 117
Query: 406 QNPNKTQCVDADECL---IDGSCDQTCTNT------HLSYVCSCTEGYTLRPDGKSCTAV 456
+ D C I DQ ++ SY CSC EGY L+PD KSC A
Sbjct: 118 YETSS----DGRSCTGGSISWCSDQLTAHSCEPILIFGSYTCSCVEGYVLQPDNKSCKAK 173
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D P ++ +S+ I ++LNGS
Sbjct: 174 NEPADRPPLLLVASSETIEVLYLNGS 199
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 147/363 (40%), Gaps = 76/363 (20%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC G+DE
Sbjct: 3517 FWCDGDYDCADGS--DERYCETGCSRDQFQC-SNGQCISAKWKCDGHEDCKFGDDEKNCE 3573
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S +C+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3574 PASPTCSSSEYVCTSGGCISASLRCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAYCI 3631
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3632 PVRWLCDGIHDC-----VDGSDEE-----NCDQGGNICRADEFLCNNSLCKLHFWVCDGE 3681
Query: 314 MDCS--------------------------------------TDDIVDNTDEDWDKYFSH 335
DC DD DN+DED ++
Sbjct: 3682 DDCGDNSDEVAEMCVKFPCPPTRPYRCRNNRVCLRPEQICNEVDDCGDNSDEDHCDKITY 3741
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP-- 393
A C +E C + +C+ + CD DC +G DE + K C +P
Sbjct: 3742 KARPCKKDEFAC-NDKKCIPMELQCDWFDDCGDGSDEQ---DCKISVTEYTCEDSVNPCG 3797
Query: 394 -------TPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
T +C C G +N QC D +EC++ G+C Q C N SY C+C + Y
Sbjct: 3798 DDAYCNQTKTSILCQCKPGFQRNRRNRQCEDINECMVFGACSQHCNNIKGSYKCACEKNY 3857
Query: 445 TLR 447
R
Sbjct: 3858 KER 3860
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 103/209 (49%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3302 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPEECPEFRCQPGRFQCGTGLCALPAFI 3360
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3361 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG-----DEEDER 3414
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ D +DE + + C P+
Sbjct: 3415 DCPENSCSPDHFQCKTTKHCISKLWVCDEDPDCA-----DGSDE-----ANCDKKTCGPH 3464
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DC + DE
Sbjct: 3465 EFQC-KNNNCIPDHWKCDSQNDCGDNSDE 3492
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 108/243 (44%), Gaps = 33/243 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++G DE C P +F C CIP+ WKC
Sbjct: 3421 CSPDHFQCKTTKHCISKLWVCDEDPDCADGSDEANCDKKTCGPHEFQCKNNNCIPDHWKC 3480
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE +
Sbjct: 3481 DSQNDC-GDNSDEENCKPQTCTLKDFLCA-NGDCVSARFWCDGDYDCA-----DGSDERY 3533
Query: 285 -------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D+F QC NGQ CI W CD DC D N + +
Sbjct: 3534 CETGCSRDQF-QCSNGQ--------CISAKWKCDGHEDCKFGDDEKNCEP--------AS 3576
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C +E C +S C++ S C+G+ DC++G DE C + + +C +K P
Sbjct: 3577 PTCSSSEYVC-TSGGCISASLRCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAYCIPVR 3634
Query: 398 AMC 400
+C
Sbjct: 3635 WLC 3637
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 21/226 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3342 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPINLR 3400
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3401 CNGQDDC-GDEEDERDCPENSCSPDHFQCKTTKHCISKLWVCDEDPDCA-----DGSDEA 3454
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DC DN+DE+ + C
Sbjct: 3455 NCDKKTCGPHEFQCK-NNNCIPDHWKCDSQNDCG-----DNSDEE-----NCKPQTCTLK 3503
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ C + + CV+ +CDG DC++G DE +C + +CS+
Sbjct: 3504 DFLCANGD-CVSARFWCDGDYDCADGSDE-RYCETGCSRDQFQCSN 3547
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 95/201 (47%), Gaps = 20/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE +C C+ QF C G+CI WKCDG DC +
Sbjct: 3508 ANGDCVSARFWCDGDYDCADGSDE-RYCETGCSRDQFQCSNGQCISAKWKCDGHEDC-KF 3565
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + C S CI + C+ E DC+ D +DE D +C
Sbjct: 3566 GDDEKNCEPASPTCSSSEYVCT-SGGCISASLRCNGEYDCA-----DGSDE-MDCVTECK 3618
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3619 EDQFRCKNKAYCIPVRWLCDGIHDC-----VDGSDEE---NCDQGGNICRADEFLCNNS- 3669
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
C CDG+ DC + DE
Sbjct: 3670 LCKLHFWVCDGEDDCGDNSDE 3690
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3380 VCLSGQFKCTKNQKCIPINLRCNGQDDCGDEEDERDCPENSCSPDHFQCKTTKHCISKLW 3439
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC DGSDE N C + QC + CIP +W CD + DC DN+DE
Sbjct: 3440 VCDEDPDC-ADGSDEANCDKKTCGPHEFQCK-NNNCIPDHWKCDSQNDCG-----DNSDE 3492
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3493 ENCKPQTCTLKDFLCA-NGDCVSARFWCDGDYDCA-----DGSDE------RYCETGCSR 3540
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC G+DE
Sbjct: 3541 DQFQC-SNGQCISAKWKCDGHEDCKFGDDE 3569
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 112/266 (42%), Gaps = 49/266 (18%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV +K CDG DC + DE +A C +F C G CI +S +C+ +DC D
Sbjct: 2540 SNRRCVPSNKVCDGANDCGDNSDEFDCKDATCASTEFRCSDGICIGKSAQCNQIIDC-AD 2598
Query: 234 GSDEPNTCIHQCF---------NGQVQCALSKKCIPHNWLCDEEMDCS--TDDI---VDN 279
SDE N C +G + C + CI W+CD DC TD++ V N
Sbjct: 2599 ASDEKNCNNTNCAYFYKLGIKSSGFISCNSTSLCILPEWICDGSNDCGDYTDELKCPVQN 2658
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ + C +G +CI WLCD + DC D DE H
Sbjct: 2659 KPTCEENYFGCPSG--------RCILTTWLCDGQKDCE-----DGVDE------LHCDSS 2699
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC--SHKCSPT- 394
C N+ C S+N+C++ CDG+ DC +G DE C + C SH C P
Sbjct: 2700 CSWNQFAC-SANKCISKQWTCDGEDDCGDGLDESDAVCGSVTCAADTFSCLGSHACVPRH 2758
Query: 395 ---------PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2759 WLCDGERDCPNGSDELSTAGCAPNNT 2784
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 123/343 (35%), Gaps = 93/343 (27%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 860 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGNNEDESNKTCAARTCQADQFSCG-NGRCIP 918
Query: 261 HNWLCDEEMDCST---------------------------------------DDIVDNTD 281
+WLCD E DC DD D +D
Sbjct: 919 TSWLCDREDDCGDTTDEMTSCEFPTCEPLTQFICRNGRCISSKWLCDSGKYHDDCGDGSD 978
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C + +CIP +W CD + DC D D T + K + + C+
Sbjct: 979 E-LGCVHSCSSDQFRC-YNGRCIPSHWACDGDNDCG--DFSDETKTNCSKEETPSLGRCN 1034
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR----- 396
E +C CV CDG+ DC +G DE CN + K C T R
Sbjct: 1035 GKEFQCSPDGNCVPELWRCDGEKDCEDGSDE-KGCNGTIRLCDEKTKFSCKSTGRCISKA 1093
Query: 397 -------------------GAMCFCPAGQNPNKTQ--------------CVDA------- 416
G MC P N T C D
Sbjct: 1094 WLCDGDIDCEDQSDEDNCEGYMCGPPKYPCANDTSICLQPEKLCNGRRDCPDGSDEGDLC 1153
Query: 417 DEC-LIDGSCDQTCTNTHLSYV-CSCTEGYTLRPDGKSCTAVN 457
DEC L +G C C+ + CSC G++L D K+C ++
Sbjct: 1154 DECSLNNGGCSHQCSVVPGGRIMCSCPAGFSLSIDNKTCEIMD 1196
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 127/334 (38%), Gaps = 87/334 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G +++ ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3140 IGRVGMDGSSQTVVIETQISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSHRHKV--P 3195
Query: 168 NELRCGSSNQCVALSKF------CDGKPDC------SNGEDEGPFCNAECTPG------- 208
N+ G +AL+ F DGK ++G D N+ T
Sbjct: 3196 NQDIPG----VIALTLFEDYIYWTDGKTKSLSRAHKTSGSDRLSLINSWHTITDIQVYHS 3251
Query: 209 --QFSCGMGKCIPESWKCDGFVDCLEDG------------SDEPNTCIHQCFNGQVQCAL 254
Q +C + C D + + TC+ C Q +C
Sbjct: 3252 YRQPDVSKHRCTLNNGGCSHLCLLAPDKMFTCACPTNFYLAADNKTCLSNCTASQFRCK- 3310
Query: 255 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 279
+ KCIP W CD DC +D DN
Sbjct: 3311 TDKCIPFWWKCDTVDDCGDGSDEPEECPEFRCQPGRFQCGTGLCALPAFICDGENDCGDN 3370
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H C +GQ +C ++KCIP N C+ + DC DE+ ++ N+
Sbjct: 3371 SDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG--------DEEDERDCPENS-- 3420
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P+ +C ++ C++ CD PDC++G DE
Sbjct: 3421 CSPDHFQCKTTKHCISKLWVCDEDPDCADGSDEA 3454
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G +R VT + WP+ L +DY+ ++LY
Sbjct: 628 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGYSRQIFVTSKMLWPNGLTLDYHANVLY 687
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E + ++G+ V+ + +L
Sbjct: 688 WCDAYYDHIERIFLNGTDRKVVYNGKDL 715
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 153/395 (38%), Gaps = 66/395 (16%)
Query: 56 HTLALE-------FNHRNQSLCFIQQQNVSSVRLRCAQINDLLN----SWDLPAPEIFPL 104
H LAL+ + + N+ L I + +S + D+L + D A +++
Sbjct: 2301 HVLALDECQNLMFWTNWNEQLPSIMRSTLSGKNAQVIISTDILTPNGLTIDHRAEKLYFS 2360
Query: 105 DE---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV---------- 151
D ++E+ G R +V SL + D ++W D +
Sbjct: 2361 DGSLGKIERCEYDGSQRYVIVKSGPGTFLSLAV--YDDYIFWSDGVRRAILRSSKYTGGD 2418
Query: 152 -ESVRVDGSHN--AVLCHPNELRCGSSNQCVALSKFC--------DGKPDCSNGEDEGPF 200
+ +R D H ++ N+ + C ++ C DG+ +CS D
Sbjct: 2419 TKVLRSDIPHQPMGIIAVANDTNSCELSPCAQMNGGCHDLCLLTPDGRVNCSCRGDRMLI 2478
Query: 201 CNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQ 251
+ C +F CG G+CI CDG C + ++ C ++ C G
Sbjct: 2479 DDNRCVTKNSTCNIYSEFECGNGECIDYQLTCDGIAHCKDKSDEKLFYCENRGCRKGFTP 2538
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C+ +++C+P N +CD DC DN+DE K C + + +C+ CI + C+
Sbjct: 2539 CS-NRRCVPSNKVCDGANDCG-----DNSDEFDCKDATCASTEFRCS-DGICIGKSAQCN 2591
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ +DC+ N + YF + + + C S++ C+ CDG DC + D
Sbjct: 2592 QIIDCADASDEKNCNNTNCAYF-YKLGIKSSGFISCNSTSLCILPEWICDGSNDCGDYTD 2650
Query: 372 EGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
E LKC + PT CP+G+
Sbjct: 2651 E------------LKCPVQNKPTCEENYFGCPSGR 2673
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E++ M G R LV KN+Q P+ LV+D L+W D L+ + SV DGS + V
Sbjct: 4036 IEESSMDGTLRRILVQKNLQRPTGLVVDQFSQRLFWADFELSVIGSVLFDGSDSVVSVST 4095
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 4096 KQGLLHPHRI 4105
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ N
Sbjct: 2001 IGKAHLDGSEKVVLVSLGIAWPNGISIDYEENKLYWCDARTDKIERIDLESGGN 2054
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 21/161 (13%)
Query: 28 EMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQI 87
++ C+ ++W + L+ +A+++ N F +VS C+Q
Sbjct: 235 QLKCTKIMKTGELTDEWIINIAQYLHNVQQIAIDWITGN----FYFVDHVSDRIFVCSQN 290
Query: 88 NDL---LNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPS 130
+ L DL P+ +D ++E+ M G NR+ +V I+ P+
Sbjct: 291 GSVCITLIELDLNNPKAIAVDPTSGKLFFTDYGNTAKVERCDMDGMNRTWIVDSKIEQPT 350
Query: 131 SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
+L +D +YW D +L++VE V G + ++R
Sbjct: 351 ALALDLINKYVYWVDIYLDSVEVVDYQGRKRHTIIKGRQIR 391
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 12/104 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSC-GMGKC 217
LC E C CV+ CDG+PDC + DE + +C P +C G KC
Sbjct: 5 LCDVGEFLCRDGVSCVSQRWLCDGEPDCPDDSDESLDTCPEEVDVKCAPNYVNCIGTNKC 64
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
I S C+G DC DG DE C Q + + +CA+++
Sbjct: 65 IHLSQLCNGVYDC-SDGYDEGVHCRELLPKCQQMSCRYKCAITR 107
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
V C PN + C +N+C+ LS+ C+G DCS+G DEG C
Sbjct: 49 VKCAPNYVNCIGTNKCIHLSQLCNGVYDCSDGYDEGVHC 87
>gi|341886251|gb|EGT42186.1| hypothetical protein CAEBREN_28281 [Caenorhabditis brenneri]
Length = 4402
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 196/467 (41%), Gaps = 71/467 (15%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTL--ALE 61
+C ++C +KKCIP + CD + DC D +DED KY K +G + A +
Sbjct: 655 ECAENTIKCRNTKKCIPAQYGCDGDNDCG-----DYSDEDV-KYCK---DGQKPVCAAKK 705
Query: 62 F---NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENR 118
F NHR C +Q +C ND + DE++E G
Sbjct: 706 FQCDNHR----CIPEQ-------WKCDSDNDCGDG----------SDEKIELCGNSTCAA 744
Query: 119 SPLVTKNIQ-WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQ 177
+ N + P + D + D D V+ + N L RC S Q
Sbjct: 745 NQFSCANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSATKNLKLPKQIFSRCASGRQ 804
Query: 178 CVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDG 234
CV L CDG+ DC +G DE + CT QF C G CIP SWKCDG DC +DG
Sbjct: 805 CVPLRNHCDGQNDCEDGSDEDSCAVSSESCTSDQFKCVSSGLCIPASWKCDGQQDC-DDG 863
Query: 235 SDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
SDEP + QC + Q +C + + H + T + ++ + +
Sbjct: 864 SDEPKFGCSSGRQCKSDQFKCGNGRCILNHQRRVAQ---------TTKTTKTGERTTKNY 914
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRC-G 348
N Q I NWLCD E DC D +DE ++ NA C + C
Sbjct: 915 NLQ---------IFQNWLCDGENDCG-----DGSDESAERGCKTPMNARKCPFEHVACEN 960
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG-Q 406
+ C+ L + CDGK C G DEG C + CS KC +P G +C CP G Q
Sbjct: 961 DPDTCIPLHQLCDGKRHCPGGSDEGGRCARDLCSADRAGCSFKCHNSPNGPICSCPFGEQ 1020
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
NKT+C +ECL SC Q C + + C C GY L D ++C
Sbjct: 1021 LVNKTKCEPENECLDASSCSQRCKDEKHGFTCFCDTGYELDADKRTC 1067
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 154/343 (44%), Gaps = 44/343 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE C PG C G CI E C
Sbjct: 3524 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCMPGHRQCDDGTCIAEHKWC 3582
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +CA S CIP ++CD + DC DN+D
Sbjct: 3583 DRKKDC-PNAADELHCEDVSRRTCSPFEFECANSV-CIPRKFMCDGDNDCG-----DNSD 3635
Query: 282 EDWDKFHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E +C + Q +CA S+ C+ LC+ DC D +DE S
Sbjct: 3636 E---TSTECRSAQCDPPLRFRCAHSRLCLNILQLCNGVNDCGQ---FDQSDEHLSMCSSF 3689
Query: 336 NAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN--KADCE----NLKCS 388
+ C ++ +C ++ CV + CD K DC + DE + KA CE N C
Sbjct: 3690 SEYGDCASDQFKC-ANGHCVNATMACDRKDDCGDQSDEVGCSKHGVKATCESAGSNGGCK 3748
Query: 389 HKCSPTPRGAM-CFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
H CS P G C C G P N +C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 3749 HTCSDVPGGGYYCHCRDGFRPDPQNPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDY 3808
Query: 445 -----TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+GS
Sbjct: 3809 ENNVVVGSMTGKDCRA----KGDAANVMIGADSSLVQLSLHGS 3847
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 165/405 (40%), Gaps = 99/405 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAECTPGQFSCGMGKCIPESW 222
C ++RC ++N C+ + CDG DC + DE FC N +C C G+CIPE+W
Sbjct: 2584 CRGVKIRCPNTNICIQPADLCDGYDDCGDKADENQLFCMNQQCAQHYVRCPSGRCIPETW 2643
Query: 223 KCDGFVDCLEDGSDEPNT-----------------------CIHQCF------------- 246
+CDG DC DG DE +T CI + F
Sbjct: 2644 QCDGDNDC-SDGWDETHTNCTDTSGKKICVGDYLFQCDNLKCISRAFICDGEDDCGDGSD 2702
Query: 247 -------------NGQVQCALSKK-------CIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+ + CA + K CIP WLCD ++ C+ + ++T+ +
Sbjct: 2703 EHTRHGCGNRTCTDQEFHCASNAKLAQPKYECIPRAWLCDGDVTCAGGED-ESTELCKTE 2761
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH---------NA 337
+C G+ +C ++ CI W CD + DC +D +DE + +S N
Sbjct: 2762 KKECNKGEFRCT-NQHCIHSTWECDGDNDC-----LDGSDEHTNCTYSSCQPDFWQCANH 2815
Query: 338 VLCHPNELRCG--------------SSNQCVALSKFCDGKPDCSNGEDEGPFC--NNKAD 381
+C P G +S +C+ +K CD DC++ DE C + +
Sbjct: 2816 KMCCPKNSAAGQKAGSKCGKNQYQCTSGECIDDAKVCDRNFDCTDRSDESSLCFIDECSL 2875
Query: 382 CENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECL--IDGSCDQTCTNTHLSY 436
E C KC G C C G ++ C + +EC I G C Q C + SY
Sbjct: 2876 AEKPLCEQKCIDQKIGYKCDCFEGFAIDVSDQKSCHNVNECFEGISG-CSQKCDDKIGSY 2934
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C+C +GY L D SC V Q+ + ++ IR+I ++G
Sbjct: 2935 KCACVDGYLLSSDDHSCK--RVEQEPEPFFLLANKHYIRKISMDG 2977
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 114/238 (47%), Gaps = 40/238 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE----PNTCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 615 QFQCKNGRCIPKEWKCDGENDCL-DESDEVDEKGDKCFHETECAENTIKCRNTKKCIPAQ 673
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK-------CIPHNWLCDEEMD 315
+ CD + DC D +DED C +GQ +KK CIP W CD + D
Sbjct: 674 YGCDGDNDCG-----DYSDED---VKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDND 725
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C D +DE + N+ C N+ C ++ +C+ + CDG DC +G DE
Sbjct: 726 CG-----DGSDEKIE--LCGNST-CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDE--- 773
Query: 376 CNNKADCENLKCSH-KCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCT 430
+K C ++CS K P+ C +G+ P + C ++C DGS + +C
Sbjct: 774 --DKERCPPVQCSATKNLKLPKQIFSRCASGRQCVPLRNHCDGQNDCE-DGSDEDSCA 828
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE C + CT +F C KCI +
Sbjct: 3355 CDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADAICMSAERNCTAEEFRCNNNKCIAK 3414
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W+CD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3415 AWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCR-----DNS 3469
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DED + C + G+ +CA + KCIP W+CD E DC DN+DE D
Sbjct: 3470 DEDKQRCPSCDDVGEFRCATTGKCIPKRWMCDTENDCG-----DNSDE-LDPSCGGTTRP 3523
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3524 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3555
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 97/224 (43%), Gaps = 38/224 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C P E +C N C+ S D K D F EC C KCIP +
Sbjct: 623 CIPKEWKCDGENDCLDESDEVDEKGDKC-------FHETECAENTIKCRNTKKCIPAQYG 675
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE + C +GQ +KK CIP W CD + DC
Sbjct: 676 CDGDNDC-GDYSDED---VKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCG---- 727
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--- 331
D +DE + C Q CA + +CIP WLCD + DC D TDED ++
Sbjct: 728 -DGSDEKIELCGNSTCAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDEDKERCPP 780
Query: 332 -YFSHNAVLCHPNEL--RCGSSNQCVALSKFCDGKPDCSNGEDE 372
S L P ++ RC S QCV L CDG+ DC +G DE
Sbjct: 781 VQCSATKNLKLPKQIFSRCASGRQCVPLRNHCDGQNDCEDGSDE 824
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTP-GQFSCGMGKCIPESWKC 224
P +CG + C+ L CD KPDC + DE P +CN P G C +CI + KC
Sbjct: 2460 PYNFQCGDGS-CILLGATCDSKPDCPDASDENPNYCNTRSCPDGYHLCTNRRCIDSAKKC 2518
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2519 NHIDDC-GDGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESLAT 2576
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +++C + CI LCD DC D DE ++ F N C
Sbjct: 2577 CPGLPIDCRGVKIRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2628
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2629 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2657
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 103/251 (41%), Gaps = 54/251 (21%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEG--PFCNAECTP-GQFSCGMGKCIPE 220
C + CG + +C+ +CDG+PDC +G DE C P G+F C C
Sbjct: 3273 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRP 3332
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL---------------- 264
CDG DC DGSDE N C C +CA + +CIP +
Sbjct: 3333 FQICDGNDDC-GDGSDEQN-CDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADA 3390
Query: 265 --CDEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQCALSK 301
E +C+ ++ N + + W + +C G +C+ S
Sbjct: 3391 ICMSAERNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSY 3450
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP+ C+ + DC DN+DED + S + V E RC ++ +C+ CD
Sbjct: 3451 RCIPNWAFCNGQDDCR-----DNSDEDKQRCPSCDDV----GEFRCATTGKCIPKRWMCD 3501
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 3502 TENDCGDNSDE 3512
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 79/193 (40%), Gaps = 18/193 (9%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC 265
P F CG G CI CD DC + + PN C C +G C +++CI C
Sbjct: 2460 PYNFQCGDGSCILLGATCDSKPDCPDASDENPNYCNTRSCPDGYHLCT-NRRCIDSAKKC 2518
Query: 266 DEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+ DC D +DE D C G C+ + CI +CD DC + + D
Sbjct: 2519 NHIDDCG-----DGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDE 2572
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ + C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2573 SLATCPGL----PIDCRGVKIRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMN 2623
Query: 385 LKCSHKCSPTPRG 397
+C+ P G
Sbjct: 2624 QQCAQHYVRCPSG 2636
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 14/122 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L + LL ++ P +D R
Sbjct: 1146 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNISQPRGIAVDPRKGVM 1205
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +D D +Y+ DS L+ ++ V D
Sbjct: 1206 FWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDLTTDRVYFADSKLDFIDFVNYD 1265
Query: 158 GS 159
GS
Sbjct: 1266 GS 1267
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G +R +V+++I P+++ +D+ ++YW D + +E +G + ++
Sbjct: 2266 RIERSNLAGGSRKVIVSESISLPAAIAVDFRNQMIYWADVNRLNIEVADYNGENRKII 2323
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 138/392 (35%), Gaps = 113/392 (28%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D + +F D L + G G R + + SS+VI D LYW D +L
Sbjct: 3136 DYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVI--FDDYLYWADWNLR-- 3191
Query: 152 ESVRVD---GSHNAVLCH----PNELR-------------CGSSN--------------- 176
E +R D G + VL PN+LR CG +N
Sbjct: 3192 EIIRCDKWTGKNETVLKKTVQLPNDLRIVHPMKQPNYPNPCGDNNGGCSHLCLIGAGGNG 3251
Query: 177 -------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
Q V LS +P+C+ + +A+C P + W CDG D
Sbjct: 3252 YTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIP------------KLWYCDGEPD 3299
Query: 230 CLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
C DGSDEP I C G+ QC + C +CD DC N D+ D
Sbjct: 3300 C-RDGSDEPGESICGQRICPVGEFQCT-NHNCTRPFQICDGNDDCGDGSDEQNCDKACDP 3357
Query: 287 FHQCFNGQVQCALSKKCIPHNWL------------------CDEEMDCSTDDIVDNTDED 328
+ +CA + +CIP + E +C+ ++ N ++
Sbjct: 3358 W------MFKCAATGRCIPRRFTCDGDDDCGDRSDEADAICMSAERNCTAEEFRCNNNKC 3411
Query: 329 WDKYFSHNA----------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
K + + + C RC SS +C+ FC+G+ DC + DE
Sbjct: 3412 IAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCRDNSDE 3471
Query: 373 G----PFCNNKADCENLKCSHKCSPTPRGAMC 400
P C+ D +C+ P+ MC
Sbjct: 3472 DKQRCPSCD---DVGEFRCATTGKCIPKRWMC 3500
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F ++E A M G NR LV + S +V+D +YW D ++ +ES+
Sbjct: 79 LRGEMFFTNQLKIEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 138
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 139 YQGNDRRIVAQ 149
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3122 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3159
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + +WD I+ D R +K A +G N + ++ + + +D+ LYW
Sbjct: 1105 NAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFISDGLDITEGIALDWVGRNLYWV 1164
Query: 145 DSHLNTVESVRV-DGSHNAVLCHPN 168
DS LNT+E + D +L H N
Sbjct: 1165 DSSLNTIEVANLEDPKQRTLLVHQN 1189
>gi|33879163|gb|AAH21204.1| LRP1 protein [Homo sapiens]
Length = 439
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQ 406
Query: 167 PNELR 171
+R
Sbjct: 407 GILVR 411
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 68 KAQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
>gi|242021136|ref|XP_002431002.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212516226|gb|EEB18264.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 2101
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/347 (33%), Positives = 157/347 (45%), Gaps = 57/347 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C NE C N CV+LS CD +PDCS+G DE C E C +F C +C+ ++
Sbjct: 399 CSINEFHCTDGN-CVSLSWKCDLEPDCSDGSDEAD-CAQEPHVCNENEFECAYPRCVKKN 456
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDD 275
+KCDG DC D SDE N C N + C S+ +CIP W CDEE DC +
Sbjct: 457 FKCDGDNDC-GDWSDEQN-----CPNTESSCGTSEFKCNGGRCIPELWKCDEETDCENGE 510
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E K C + C + CI WLCD DCS + +N ++
Sbjct: 511 DEMGCTEKLPK--TCGPDEFSCN-NGNCILKTWLCDNVQDCSKGEDEENCEQ-------- 559
Query: 336 NAVLCHPNELRCGSSNQ-----------------CVALSKFCDGKPDCSNGEDEGPFCNN 378
CH + C + + C+ CDGK DC GEDE
Sbjct: 560 ---TCHETQFNCAAHQKNDSSAILIRKSPKPLINCIGRKHVCDGKKDCPKGEDERNCPKK 616
Query: 379 KADCENLKCSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDADECLI--DGSCDQTCTNTH 433
K ++ KC C G C C AG + + C D DEC D C Q C NT
Sbjct: 617 KKCDDDSKCQQLCVVLSNGRDACSCEAGFILSSDNHTCDDIDECKFEYDPVCSQICNNTI 676
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
S+ C C +GY LRPDG++C A+ +P ++IF++ +DIR++ LN
Sbjct: 677 GSFTCLCRKGYVLRPDGRTCKAIG----DPPTLIFANRIDIRQVSLN 719
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM+G NR L +K++ WP+ L ID+ + +YW D +E R+DGS L
Sbjct: 1150 KIERAGMNGSNRKILFSKDLIWPNGLAIDHEKSRIYWVDGGTKAIEYSRLDGSGRTTL 1207
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E + M G NR ++T+ + WP+ L +DY D LYW D+ + +ES + DGS
Sbjct: 841 KIEVSEMDGSNRKSIITEGVFWPNGLALDYAIDRLYWTDAKHHAIESAKFDGS 893
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 86/209 (41%), Gaps = 48/209 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C S C+ + CDG DC+ +DE CG +
Sbjct: 271 CEQDEFLCVGSCTCIPNTFRCDGDADCTGEQDE------------LECG-------ETEL 311
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D F CLE + V+C S KCI WLCD + DC +DE
Sbjct: 312 DIFQSCLET-------------DNYVRCPRSGKCIKKTWLCDGDDDCGD-----FSDETH 353
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C G+ +C + CI +WLCD + DC D D T+ NA C NE
Sbjct: 354 CDGRNCTEGEFECN-NGFCIQKSWLCDGDNDCK--DYSDETN-----CTKKNA--CSINE 403
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C N CV+LS CD +PDCS+G DE
Sbjct: 404 FHCTDGN-CVSLSWKCDLEPDCSDGSDEA 431
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+E+A M G+NR L+ ++ WP+ L ID LYW D T+ES ++G ++
Sbjct: 1457 RIEQADMDGKNRKVLIADDLDWPNGLAIDRPGGRLYWNDGKRKTIESSDLEGRGRKIIVR 1516
Query: 166 ---HPNEL 170
HP L
Sbjct: 1517 EVPHPYGL 1524
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A ++G +S ++ ++ P + ID+ D+LYW DS VE +DG H +V+
Sbjct: 755 IKRAKVNGTEKSDVIKWGLESPGGVAIDWIHDLLYWTDSGTRRVEVATLDGKHRSVIAS- 813
Query: 168 NEL---RCGSSNQCVALSKFCD--GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
N+L R + +A+ + D KP E +G + T G F P
Sbjct: 814 NDLDKPRAIVVHPGLAVVFWTDWGPKPKIEVSEMDGSNRKSIITEGVF-------WPNGL 866
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
D +D L + + F+G + + K +PH
Sbjct: 867 ALDYAIDRLYWTDAKHHAIESAKFDGSERRKIVTKGLPH 905
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ K+ ++G N+ +++ N++ PS L ID+ LYW D+ N +E ++GS A+L
Sbjct: 1063 RISKSFLNGSNQEVVISSNLESPSGLAIDWVTKKLYWADAGTNRIELSNLNGSMRALL 1120
>gi|30851203|gb|AAH52593.1| LRP1 protein [Homo sapiens]
gi|47940659|gb|AAH72015.1| LRP1 protein [Homo sapiens]
Length = 296
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 68 KAQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
>gi|334329873|ref|XP_001370906.2| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Monodelphis domestica]
Length = 4578
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC EDE C A C QFSCG G+CIP +W
Sbjct: 865 CPDDQFKC-QNNRCIPKRWLCDGANDCGGNEDESNQTCAARTCQVDQFSCGNGRCIPRAW 923
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T CIH
Sbjct: 924 LCDREDDCGDQTDEMISCEFPTCEPLTQFICKNGRCISSKWHCDSDDDCGDGSDEVGCIH 983
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCALS 300
C + Q +C+ S +CIP +W CD + DC +D+ N T E+ C + QC
Sbjct: 984 SCSDNQFRCS-SGRCIPGHWTCDGDNDCGDFSDETKANCTKEEIRSPAGCNGNEFQCDPD 1042
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1043 GNCVPDLWRCDGEKDCEDGSDEKGCNGTMRLCDEKTKFSCKSTGRCINKAWVCDGDIDCE 1102
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED + F LC P + C + ++ C+ K C+G+ DCS+G DEG C+ +
Sbjct: 1103 DQSDEDDCESF-----LCGPPKYPCANDTSICLQPEKLCNGRRDCSDGSDEGDLCD-ECS 1156
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NP+ C D C C Q C S C
Sbjct: 1157 LNNGGCSNHCSVVPGRGIVCSCPTGLQLNPDNKTCEIVDYCSKHLKCSQVCEQHKHSVKC 1216
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+++ + A IIFS +IRRI L+
Sbjct: 1217 SCYEGWKLDMDGESCTSIDPFE---AFIIFSIRHEIRRIDLH 1255
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 3/146 (2%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C N + C +N C+ LS+ C+G DCS+G DEG C +C+ + C +KC+ T G
Sbjct: 56 CPLNHIACLGTNTCIHLSQLCNGVFDCSDGYDEGVHCRELLPNCQQMNCQYKCAITRNGT 115
Query: 399 MCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C+C G + C D DEC + G+C QTC NT+ SYVCSC EGY ++ D KSC A
Sbjct: 116 GCYCQDGYEITEDGRSCKDQDECAVYGTCSQTCINTYGSYVCSCVEGYLMQVDNKSCKAK 175
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D+P ++ ++ I ++LNGS
Sbjct: 176 NEPSDKPPVLLIANYETIEILYLNGS 201
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 152/369 (41%), Gaps = 68/369 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C S +C+ + CDG+ DC +G DE C++ C+ QF C KCI + W C
Sbjct: 2661 CEENYFGC-PSGRCILNTWICDGQKDCEDGVDEF-HCDSSCSWNQFPCSTQKCISKQWIC 2718
Query: 225 DGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDD 275
DG DC DG DE ++ C C S C+P +WLCD E DC ST
Sbjct: 2719 DGEDDC-GDGLDESDSICGAITCAADMFSCLGSHACVPRHWLCDGERDCPNGSDELSTAG 2777
Query: 276 IVDNTDEDWDKF--------------------------------HQCFNGQVQCALSKKC 303
N D + F QC + CA +
Sbjct: 2778 CAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESLECGYRQCSPEEFSCADGRCL 2837
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQCVALS 357
+ W CD + DC D++DE + C E C SS +C+
Sbjct: 2838 LNSQWQCDGDFDCP-----DHSDE------APLNAKCKSAEQSCNSSFFMCKNGRCIPSG 2886
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
CD K DC +G DE N+ + + CS C P G C C G ++ KT C
Sbjct: 2887 GLCDSKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLKDDGKT-C 2945
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
VD DEC C Q C NT+ +Y C CT+GY ++PD T DE +I + +
Sbjct: 2946 VDMDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNP--TGCKSLSDEEPFLILADHHE 3003
Query: 474 IRRIHLNGS 482
IR+I +GS
Sbjct: 3004 IRKISTDGS 3012
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 150/370 (40%), Gaps = 75/370 (20%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C ++ QC++ CDG DC G+DE
Sbjct: 3511 FWCDGDYDCADGS--DERNCESGCSKDQFQC-ANGQCISAKWKCDGHEDCKFGDDEKNCE 3567
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S +C+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3568 PASPTCSSSEYVCASGGCISASLRCNGEYDC-ADGSDEMD-CVTECKEHQFRCKNKAHCI 3625
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK------CIPHNWLCDEE 313
P WLCD DC VD +DED C G C + C H W+CD E
Sbjct: 3626 PIRWLCDGIHDC-----VDGSDED-----HCDRGGNICRADEYLCNNSLCKLHFWVCDGE 3675
Query: 314 MDCS--------------------------------------TDDIVDNTDED--WDKYF 333
DC DD DN+DED DK
Sbjct: 3676 DDCGDNSDEVPEMCAKFPCPPTRPYRCRNNRVCLRPEQICNGIDDCGDNSDEDHCGDK-L 3734
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCEN----LKC 387
++ C +E C S +C+ CD DC +G DE + CE+
Sbjct: 3735 TYKTRPCKKDEFAC-SDKKCIPTELQCDRFDDCGDGSDEQGCRIVPTEYTCEDNVNPCGD 3793
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
C+ T C C G +N QC D +ECL+ G+C Q C N SY C C + Y
Sbjct: 3794 DAYCNQTQTSVFCRCKPGFQRNMRNRQCEDLNECLVFGACSQQCVNMKGSYKCVCDQNY- 3852
Query: 446 LRPDGKSCTA 455
+ +CTA
Sbjct: 3853 -KEKNNTCTA 3861
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3296 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3354
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3355 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG-----DEEDER 3408
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3409 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3458
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3459 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3486
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C + C+ QF C G+CI WKCDG DC +
Sbjct: 3502 ANGDCVSSRFWCDGDYDCADGSDERN-CESGCSKDQFQCANGQCISAKWKCDGHEDC-KF 3559
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3560 GDDEKNCEPASPTCSSSEYVCA-SGGCISASLRCNGEYDCA-----DGSDE-MDCVTECK 3612
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DED + +C +E C +S
Sbjct: 3613 EHQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDED---HCDRGGNICRADEYLCNNS- 3663
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3664 LCKLHFWVCDGEDDCGDNSDEVP 3686
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 140/378 (37%), Gaps = 89/378 (23%)
Query: 164 LCHPNELRCGSSNQCV--ALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
LC P E RC + +C+ D ED N C QF C +CIP+
Sbjct: 823 LCKPGEFRC-RNRRCIQDRWKCDGDDDCLDGTDEDSVNCFNHSCPDDQFKCQNNRCIPKR 881
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVD 278
W CDG DC + + TC + C Q C + +CIP WLCD E DC TD+++
Sbjct: 882 WLCDGANDCGGNEDESNQTCAARTCQVDQFSCG-NGRCIPRAWLCDREDDCGDQTDEMIS 940
Query: 279 ---NTDEDWDKF------------------------------HQCFNGQVQCALSKKCIP 305
T E +F H C + Q +C+ S +CIP
Sbjct: 941 CEFPTCEPLTQFICKNGRCISSKWHCDSDDDCGDGSDEVGCIHSCSDNQFRCS-SGRCIP 999
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D D T + K + C+ NE +C CV CDG+ D
Sbjct: 1000 GHWTCDGDNDCG--DFSDETKANCTKEEIRSPAGCNGNEFQCDPDGNCVPDLWRCDGEKD 1057
Query: 366 CSNGEDEG--------------------PFCNNKA----------------DCENLKCSH 389
C +G DE C NKA DCE+ C
Sbjct: 1058 CEDGSDEKGCNGTMRLCDEKTKFSCKSTGRCINKAWVCDGDIDCEDQSDEDDCESFLCGP 1117
Query: 390 KCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-LIDGSCDQTCTNT-HLSYVCS 439
P ++C P + C D DEC L +G C C+ VCS
Sbjct: 1118 PKYPCANDTSICLQPEKLCNGRRDCSDGSDEGDLCDECSLNNGGCSNHCSVVPGRGIVCS 1177
Query: 440 CTEGYTLRPDGKSCTAVN 457
C G L PD K+C V+
Sbjct: 1178 CPTGLQLNPDNKTCEIVD 1195
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3336 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPINLR 3394
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3395 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3448
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3449 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3497
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3498 DFLCANGD-CVSSRFWCDGDYDCADGSDE 3525
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 104/236 (44%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3415 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3474
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3475 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDYDCA-----DGSDER- 3526
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QCA + +CI W CD DC D N + + C +E
Sbjct: 3527 NCESGCSKDQFQCA-NGQCISAKWKCDGHEDCKFGDDEKNCEP--------ASPTCSSSE 3577
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + +C +K P +C
Sbjct: 3578 YVCASGG-CISASLRCNGEYDCADGSDEMD-CVTECKEHQFRCKNKAHCIPIRWLC 3631
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3374 VCLSGQFKCTKNQKCIPINLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3433
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3434 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3486
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3487 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDYDCA-----DGSDE------RNCESGCSK 3534
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C ++ QC++ CDG DC G+DE
Sbjct: 3535 DQFQC-ANGQCISAKWKCDGHEDCKFGDDE 3563
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 107/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ SK CDG+ DC + DE + C +F C G CIP+S +C+ DC D SD
Sbjct: 2542 RCIPNSKLCDGEDDCGDSSDELECKVSTCAAIEFRCADGTCIPKSARCNQNTDC-ADASD 2600
Query: 237 EPNTCIHQCFN---------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C + G +QC + CI W+CD DC D D
Sbjct: 2601 EKNCSNTDCTHFYKLGVKSTGFIQCNSTSLCILPAWICDGSNDCG--DYSDELKCPVQSK 2658
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2659 PKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGVDE------FHCDSSCSWNQFPC 2706
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + SH C P
Sbjct: 2707 -STQKCISKQWICDGEDDCGDGLDESDSICGAITCAADMFSCLGSHACVPRHWLCDGERD 2765
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2766 CPNGSDELSTAGCAPNNT 2783
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 131/326 (40%), Gaps = 50/326 (15%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D + + LY
Sbjct: 630 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDSHTNTLY 689
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNELR----CGSSNQCVALSKFCDG---KPDCSNGE 195
WCD++ + +E V ++G++ V+ EL V + + +G + D E
Sbjct: 690 WCDAYYDHIEKVFLNGTNRKVVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLDLMTSE 749
Query: 196 ------DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS-----------DEP 238
+ P + + G C + C + G +
Sbjct: 750 VTLLRQERPPLFGLQIYDPRKQQGNNACRVNNGGCGTLCLAIPGGRVCACADNQLLDENG 809
Query: 239 NTCI--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
TCI H C G+ +C +++CI W CD + DC D+ + H C
Sbjct: 810 TTCIFSPGEALPHLCKPGEFRCR-NRRCIQDRWKCDGDDDCLDGTDEDSVNC---FNHSC 865
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ Q +C + +CIP WLCD DC ++ N + A C ++ CG+
Sbjct: 866 PDDQFKCQ-NNRCIPKRWLCDGANDCGGNEDESNQ--------TCAARTCQVDQFSCGNG 916
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFC 376
+C+ + CD + DC + DE C
Sbjct: 917 -RCIPRAWLCDREDDCGDQTDEMISC 941
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 127/337 (37%), Gaps = 93/337 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G ++S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3134 IGRVGMDGTDQSVVIETKISRPMALTIDYVNSRLYWADE--NHIEFSNMDGSHRYKV--P 3189
Query: 168 NELRCGSSNQCVALSKF------CDGKPDC------SNGEDEGPFCNAECTPGQFSCGMG 215
N+ G +AL+ F DGK ++G D N+ T
Sbjct: 3190 NQDIPG----VIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLINSWHTITDIQVYHS 3245
Query: 216 KCIPESWKCDGFVDCLEDG------------------------SDEPNTCIHQCFNGQVQ 251
P+ K V L +G + + TC+ C Q +
Sbjct: 3246 YRQPDVAK---HVCMLNNGGCSHLCLLAPGRSHTCACPTNFYLAADNKTCLSNCTASQFR 3302
Query: 252 CALSKKCIPHNWLCDEEMDC-----------------------------------STDDI 276
C + KCIP W CD DC +D
Sbjct: 3303 CK-TDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDC 3361
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE H C +GQ +C ++KCIP N C+ + DC DE+ ++ N
Sbjct: 3362 GDNSDELNCDTHVCLSGQFKCTKNQKCIPINLRCNGQDDCG--------DEEDERDCPEN 3413
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3414 S--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3448
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCDG 226
E CG+ +C+ CDG C + DE +C N C G C +CIP S CDG
Sbjct: 2494 EFECGNG-ECIDYQLTCDGIVHCKDKSDEKLLYCENRSCRRGFKHCYNRRCIPNSKLCDG 2552
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD-E 282
DC D SDE + C + +CA CIP + C++ DC S + NTD
Sbjct: 2553 EDDC-GDSSDELECKVSTCAAIEFRCA-DGTCIPKSARCNQNTDCADASDEKNCSNTDCT 2610
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K G +QC + CI W+CD DC D +DE K + C
Sbjct: 2611 HFYKLGVKSTGFIQCNSTSLCILPAWICDGSNDCG-----DYSDE--LKCPVQSKPKCEE 2663
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 2664 NYFGC-PSGRCILNTWICDGQKDCEDGVDE 2692
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 29/204 (14%)
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCD 266
+F CG G+CI CDG V C + ++ C ++ C G C +++CIP++ LCD
Sbjct: 2493 AEFECGNGECIDYQLTCDGIVHCKDKSDEKLLYCENRSCRRGFKHC-YNRRCIPNSKLCD 2551
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
E DC D++DE K C + +CA CIP + C++ DC+ D +D
Sbjct: 2552 GEDDCG-----DSSDELECKVSTCAAIEFRCA-DGTCIPKSARCNQNTDCA-----DASD 2600
Query: 327 E----DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
E + D + + ++C S++ C+ + CDG DC + DE
Sbjct: 2601 EKNCSNTDCTHFYKLGVKSTGFIQCNSTSLCILPAWICDGSNDCGDYSDE---------- 2650
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQ 406
LKC + P CP+G+
Sbjct: 2651 --LKCPVQSKPKCEENYFGCPSGR 2672
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ ++ +E + ++ N
Sbjct: 2000 IGKARLDGSEKVVLVSMGIAWPNGVSIDYEENKLYWCDARIDKIERIDLESGGN 2053
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D +YW D L+ + SV DG
Sbjct: 4031 IEEAAMDGTLRRILVQKNLQRPTGLAVDQFSQRIYWADFELSVIGSVLFDG 4081
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ +V + P++L +D ++YW D +L+ VE V G + +
Sbjct: 329 KVERCDMDGMNRTRIVDSKTEQPAALALDLVSKLVYWVDLYLDYVEVVDYQGKNRHTIIQ 388
Query: 167 PNELR 171
++R
Sbjct: 389 GIQVR 393
>gi|260807227|ref|XP_002598410.1| low-density lipoprotein receptor-related protein 2 [Branchiostoma
floridae]
gi|229283683|gb|EEN54422.1| low-density lipoprotein receptor-related protein 2 [Branchiostoma
floridae]
Length = 4094
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/304 (35%), Positives = 142/304 (46%), Gaps = 26/304 (8%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPE 220
+ C ++ C + +CV S CDG CS+ DE C C+ +F+C G +CIP
Sbjct: 734 GLTCRADQFTC-DNGRCVPQSAVCDGSSHCSDDSDERD-CVFSCSYQEFACASGDQCIPN 791
Query: 221 SWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+CDG DC D SDE P+ C + C ++CIP W CD DC V
Sbjct: 792 YGRCDGHQDC-RDSSDEQDCPSRPPDGCLANEFHCTTEQECIPARWECDGHADC-----V 845
Query: 278 DNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + C Q QC +CI W+CD + DC D+ D D
Sbjct: 846 DGSDEHTYCPPFTCSQYQFQCETVNRCISRWWVCDGDNDCG--DMSDEQD------CPTP 897
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTP 395
+ C + +C ++C+ + CDG DCSNG DEGP CN E N CS C T
Sbjct: 898 SFSCLWGQWKCVGVDECIPYGQVCDGTEDCSNGADEGP-CNTDVCHEGNGGCSDICVVTV 956
Query: 396 RGAMCFCPAGQN--PNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
GA C C G+ N T+ C D +EC G C Q CTN S+ C C +GY L PD ++
Sbjct: 957 FGADCECNVGRQLVENSTKVCEDINECDPPGHCSQICTNLEGSFKCECDDGYQLEPDQRT 1016
Query: 453 CTAV 456
C
Sbjct: 1017 CKVT 1020
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 157/373 (42%), Gaps = 65/373 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC----NAECTPGQFSCGMGKC 217
A C +E C SS +C+ S CDG DC + DE + C QF+C G+C
Sbjct: 2393 AATCSASEFPC-SSGRCLPASWHCDGDNDCGDNSDEPEDVCSNPDRTCYGDQFTCDNGRC 2451
Query: 218 IPESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQC----ALSKKCIPHNWLCDEEMDC 271
IP W CD DC + D + N C G C A ++CI ++CD + DC
Sbjct: 2452 IPSRWICDNDNDCGDMSDEDERHNCAERPCAEGYFTCTNSPAGRRRCILQRFVCDGDADC 2511
Query: 272 S-----------------------------------TDDIVDNTDEDWDKFHQCFNGQVQ 296
+D D++DE D + N Q Q
Sbjct: 2512 PDAEDEHQNCTRRTCLENEFTCDNGLCISSQARCDHYNDCGDHSDESNDCQYATCNSQFQ 2571
Query: 297 CA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+ +CIP W CD + DC D +DE D C PN+ C +S QC++
Sbjct: 2572 FTCQNGRCIPSRWTCDGDNDC-----FDGSDE-LDSLCVTQQPTCPPNQFLC-NSGQCIS 2624
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCEN---LKCSHKCSPTPRGAMCFCPAGQ--NPNK 410
S CDG+ DC + DE F +C+N +C H+C T C C AG +
Sbjct: 2625 NSLVCDGRYDCPDNSDE--FHCGINECQNPAVSRCEHRCVDTQTSYRCVCNAGYVLMADG 2682
Query: 411 TQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C D DEC C Q C NT SY+C C +GY PDG +C + EP ++FS
Sbjct: 2683 KACTDIDECTDTPWVCSQGCENTPGSYICKCGDGYLREPDGFTCK--HTATVEPY-LVFS 2739
Query: 470 STVDIRRIHLNGS 482
+ IR + ++GS
Sbjct: 2740 NRYYIRNLTVDGS 2752
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 159/411 (38%), Gaps = 107/411 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C ++N+C+A + CDG DC + DE +C+ C PGQF+C G C+P++W
Sbjct: 3131 CSTGQFKC-NNNRCIAQAWRCDGDNDCGDNSDEDQEYCSTRTCGPGQFTCANGLCVPDTW 3189
Query: 223 KCDGFVDCLEDGSDEP-NTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CD DC D SDEP TC +C + +C + +CIP W+CD + DC D +
Sbjct: 3190 VCDWDNDC-GDNSDEPAETCPPRECSESEFRCG-NGRCIPGRWICDHDNDCG-----DQS 3242
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKY-----F 333
DE + C Q +C S CI ++CD + DC S+D+ T Y F
Sbjct: 3243 DEQSCETQSCAPDQFECQ-SGHCIDQRFVCDGDRDCRDSSDEFNCPTRYPDGSYCPANKF 3301
Query: 334 SHNAVLCHPN------------------------------ELRCGSSNQCVALSKFCDGK 363
+C P RC S+ C+ K C+ +
Sbjct: 3302 ECANTICIPRTWRCDGDDDCGDGSDETTQICYQIDCPEDTRFRC-SNGPCIPRWKLCNLR 3360
Query: 364 PDCSNGEDEG----------------------------PFCNNKADCENLK--------- 386
DC + DE C+N DC +L
Sbjct: 3361 DDCGDASDENNHTICQPTRQNCRDDEFKCENHNCVASTKLCDNTDDCGDLSDERGCNSNN 3420
Query: 387 ------------CSHKCSPTPRGAMCFCPAGQNPNKT---QCVDADECLIDGSCDQTCTN 431
C C+ G +C C G + C D +EC + SC Q C N
Sbjct: 3421 EERNECTDGDHGCERNCTDILGGYVCSCGPGYTISAVDSKSCADVNECEVFSSCPQGCRN 3480
Query: 432 THLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
S+ C C+ G+ L D C A + E +IFS ++RR + G
Sbjct: 3481 NKGSFRCVCSRGFRLEEGDVPICKAYD---GEAKFVIFSDGPEMRRYYPEG 3528
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 117/286 (40%), Gaps = 72/286 (25%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-------------- 201
DG C N+ RC +++C++ CDG+ DC +G DE C
Sbjct: 3041 FDGRTCIANCAANQYRCADNDRCISDLWKCDGEEDCLDGSDEPDSCPPRHCPAGTFQCTN 3100
Query: 202 ---------------------------NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+ C+ GQF C +CI ++W+CDG DC ++
Sbjct: 3101 LNCTYAYYLCDGDDDCGDGSDEDLNCDSRPCSTGQFKCNNNRCIAQAWRCDGDNDCGDNS 3160
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCF 291
++ C C GQ CA + C+P W+CD + DC DN+DE + +C
Sbjct: 3161 DEDQEYCSTRTCGPGQFTCA-NGLCVPDTWVCDWDNDCG-----DNSDEPAETCPPRECS 3214
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+ +C + +CIP W+CD + DC D +DE S C P++ C S
Sbjct: 3215 ESEFRCG-NGRCIPGRWICDHDNDCG-----DQSDEQ-----SCETQSCAPDQFEC-QSG 3262
Query: 352 QCVALSKFCDGKPDCSNGEDE---------GPFC-NNKADCENLKC 387
C+ CDG DC + DE G +C NK +C N C
Sbjct: 3263 HCIDQRFVCDGDRDCRDSSDEFNCPTRYPDGSYCPANKFECANTIC 3308
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 122/303 (40%), Gaps = 52/303 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+E+ + G R +V+ ++ P+ + I + +YW D+ LN V N +
Sbjct: 2107 IERVNLDGSGRETVVSSSMA-PNGIAI--SGSYVYWTDTSLNAVLRAEKHTGANQIRMAQ 2163
Query: 168 N--------ELRCGSSNQCV---------ALSKFC--------------DGKPDCSNGED 196
+ SS QC S C DG +NG
Sbjct: 2164 GLGSGMRDVHVFSTSSQQCSNDPCENNNGGCSHSCHPAPSGGTECACPNDGNYKLANGGK 2223
Query: 197 EGPFCNAECTPG-QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCAL 254
+ N+ C QF+C G+CIP WKCD DC ++ + P C H C C
Sbjct: 2224 DCVPANSTCNEQWQFTCQNGRCIPSRWKCDVDNDCGDNSDELPRVCADHVCLATDYTCN- 2282
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+K+CIP + CD + DC DN+DE ++ C G+ C S +CI CD
Sbjct: 2283 NKRCIPAYFRCDFDNDCR-----DNSDEADCEYPDCGEGEFTCD-SGRCIDIAQRCDGYN 2336
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C DNT D + C PN ++C ++N C+ CDG DC + DE P
Sbjct: 2337 HCR-----DNTTSD---EINCPPSTCRPNLIKCSTTNVCIPRFWLCDGDNDCGDNSDETP 2388
Query: 375 -FC 376
FC
Sbjct: 2389 TFC 2391
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 129/330 (39%), Gaps = 89/330 (26%)
Query: 115 GENRSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR-VDGSHNAVL------- 164
G NR ++ T + P + +D +YW D + TVE R ++G+ +
Sbjct: 2932 GSNRHTIIGPTADGTAPHPFAMTLFEDWIYWSDWNTKTVEKARKLNGTERTTMVTTVHRP 2991
Query: 165 -----CHPNELR-----CGSSN-QCVALSKFCDGK-------PDCSNGEDEGPFCNAECT 206
HP CG +N C L + PD N +G C A C
Sbjct: 2992 MDIHIVHPQRQMPFVNPCGDNNGGCSHLCLMAPERRGYTCACPDNFNLGFDGRTCIANCA 3051
Query: 207 PGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTC--------IHQCFN---------- 247
Q+ C +CI + WKCDG DCL DGSDEP++C QC N
Sbjct: 3052 ANQYRCADNDRCISDLWKCDGEEDCL-DGSDEPDSCPPRHCPAGTFQCTNLNCTYAYYLC 3110
Query: 248 -----------------------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
GQ +C + +CI W CD + DC DN+DED
Sbjct: 3111 DGDDDCGDGSDEDLNCDSRPCSTGQFKCN-NNRCIAQAWRCDGDNDCG-----DNSDEDQ 3164
Query: 285 D--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ C GQ CA + C+P W+CD + DC DN+DE + C
Sbjct: 3165 EYCSTRTCGPGQFTCA-NGLCVPDTWVCDWDNDCG-----DNSDEPAETCPPRE---CSE 3215
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E RCG+ +C+ CD DC + DE
Sbjct: 3216 SEFRCGNG-RCIPGRWICDHDNDCGDQSDE 3244
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 27/255 (10%)
Query: 149 NTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG 208
N+ E RV H +C + C ++ +C+ CD DC + DE +C G
Sbjct: 2261 NSDELPRVCADH---VCLATDYTC-NNKRCIPAYFRCDFDNDCRDNSDEADCEYPDCGEG 2316
Query: 209 QFSCGMGKCIPESWKCDGFVDCLED-GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
+F+C G+CI + +CDG+ C ++ SDE N C ++C+ + CIP WLCD
Sbjct: 2317 EFTCDSGRCIDIAQRCDGYNHCRDNTTSDEINCPPSTCRPNLIKCSTTNVCIPRFWLCDG 2376
Query: 268 EMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ DC DN+DE + C + C+ S +C+P +W CD + DC DN+
Sbjct: 2377 DNDCG-----DNSDETPTFCLAATCSASEFPCS-SGRCLPASWHCDGDNDCG-----DNS 2425
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DE D S+ C+ ++ C + +C+ CD DC + DE + + +C
Sbjct: 2426 DEPED-VCSNPDRTCYGDQFTC-DNGRCIPSRWICDNDNDCGDMSDE----DERHNCAER 2479
Query: 386 KCSH---KCSPTPRG 397
C+ C+ +P G
Sbjct: 2480 PCAEGYFTCTNSPAG 2494
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNG--EDEGPFCNAECTPGQFSCGMGK-CIPES 221
C E C S +C+ +++ CDG C + DE + C P C CIP
Sbjct: 2313 CGEGEFTC-DSGRCIDIAQRCDGYNHCRDNTTSDEINCPPSTCRPNLIKCSTTNVCIPRF 2371
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC ++ + P C+ C + C+ S +C+P +W CD + DC DN+
Sbjct: 2372 WLCDGDNDCGDNSDETPTFCLAATCSASEFPCS-SGRCLPASWHCDGDNDCG-----DNS 2425
Query: 281 DEDWD----KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE D C+ Q C + +CIP W+CD + DC D +DED HN
Sbjct: 2426 DEPEDVCSNPDRTCYGDQFTCD-NGRCIPSRWICDNDNDCG-----DMSDED----ERHN 2475
Query: 337 AV--LCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C C +S +C+ CDG DC + EDE C + EN
Sbjct: 2476 CAERPCAEGYFTCTNSPAGRRRCILQRFVCDGDADCPDAEDEHQNCTRRTCLEN 2529
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 6/118 (5%)
Query: 54 GTHTLAL-EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
G T+ + + N+++ F QNV+ R + D +S+ L + + R+E+AG
Sbjct: 1068 GLQTIEVSDLAGTNRAVLF--NQNVTYPR---GLVIDPRDSYRLMFWTDWGQNPRIERAG 1122
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
M G R+ +VT+ + WP+ L ID+ LY+ D+ L+ ++ DG+ + N+L
Sbjct: 1123 MDGSGRTTIVTEKLYWPNGLAIDFPTQKLYFADARLDYIDFCNYDGTGRRQVLASNQL 1180
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A M G NR LV I W + + +DY +YW D L+ +E+VR DG+ +
Sbjct: 123 KIERAYMDGSNRFNLVDTRISWAAGVTLDYVNKRVYWADGRLDVLETVRYDGTDRKTI 180
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+A ++GE R +V + WP+ L IDY N +YWCD+ N +ES+ DG+ ++
Sbjct: 3673 KIEQAWLNGEQRRVVVGTQLGWPTGLTIDYTNNHRVYWCDAKENVIESINWDGTDRQMV 3731
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 13/126 (10%)
Query: 43 DWDK---YFK-RILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
DW YF + N + + LE N +++ + N ++ + W PA
Sbjct: 383 DWKSKHLYFTDSVFNTINVVHLE-NRWRKAIASVNVGNPRAIVIAPHSGYIFWTDWSRPA 441
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
R+E+A G R+ +V + WP+ L IDY Q LYWCD+ + +E G
Sbjct: 442 --------RIERALTDGSERTVIVNTTLGWPNGLSIDYPQLKLYWCDAFFDKIEFSNFGG 493
Query: 159 SHNAVL 164
+ L
Sbjct: 494 QNRGRL 499
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 21/144 (14%)
Query: 60 LEFNHRNQSLCFIQQQNVSSVRL---RCAQINDLLNSWDLPAPEIFPLDER--------- 107
L +N R F+ + S R RC IN + + P +D +
Sbjct: 2819 LYWNDRRMKKMFVSELTGRSRRTHHQRC--INKNGTDYCMQEPRALAVDPKEAFIYFTDW 2876
Query: 108 -----LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
+ + G + L+T+ + WP++L I+Y L+W D+HL+ +E DGS+
Sbjct: 2877 GYRAYIARISADGSQKEVLITEKVSWPNALTIEYATGRLFWADAHLDFIEFCNKDGSNRH 2936
Query: 163 VLCHPNELRCGSSNQCVALSKFCD 186
+ P G++ A++ F D
Sbjct: 2937 TIIGPTAD--GTAPHPFAMTLFED 2958
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 135/360 (37%), Gaps = 100/360 (27%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D P +++ D +++E + G+NR L + I P +V+ ++D +Y+ D +
Sbjct: 468 SIDYPQLKLYWCDAFFDKIEFSNFGGQNRGRLNVRYINHPFGVVV--HEDYVYFTDWNTR 525
Query: 150 TVESVR-VDGSHNAVLCHP----NELRC-----------------GSSNQCVAL---SKF 184
++ VR DG + + E+R GS N C ++
Sbjct: 526 SINRVRKSDGGNQQTIRRGIQQLMEVRVFDPAKQSNRDTLCTMDGGSRNDCDQFCFTVRY 585
Query: 185 CDGKPDCSNG---EDEGPFCNAE----------CTPGQFSCGMGKCIPESWKCDGF---- 227
K C G + +G CN + + F C G+CI ++CDG
Sbjct: 586 NQRKCACGYGFSLDSDGRTCNPDPSNQPPTSQCLSSFSFPCSNGRCIYRYYRCDGDDDCG 645
Query: 228 ------------------VDCLEDG-----------------SDEPNTCIHQCFNGQVQC 252
C G SDE N + C +GQ C
Sbjct: 646 DNSDEEGCGTEHTCSPLSFHCTNGGCVPRRWRCDNDDDCGDGSDEANCTVTSCRSGQFTC 705
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
S +C+P W CD + DC D +DE + C Q C + +C+P + +CD
Sbjct: 706 DNS-RCVPDFWRCDSDNDCG-----DGSDERDCQGLTCRADQFTCD-NGRCVPQSAVCDG 758
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CS D++DE D FS C E C S +QC+ CDG DC + DE
Sbjct: 759 SSHCS-----DDSDER-DCVFS-----CSYQEFACASGDQCIPNYGRCDGHQDCRDSSDE 807
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 17/98 (17%)
Query: 389 HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH------LSYVCSCTE 442
H+ + P G + P Q + C + + G C Q C +H L Y C C
Sbjct: 230 HETTVRPYGVVSVHPVRQMQVTSPCGNNN-----GGCSQMCVLSHRSDNDGLGYRCMCQT 284
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
GY L PD ++CT ++ ++FSS +R I L+
Sbjct: 285 GYELAPDNRNCTRLD------KFLLFSSRYAVRGIPLD 316
>gi|28175681|gb|AAH45107.1| LRP1 protein [Homo sapiens]
Length = 292
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 68 KAQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCR 109
>gi|47229539|emb|CAG06735.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2465
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/224 (34%), Positives = 106/224 (47%), Gaps = 36/224 (16%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE+ D C PNE RCG
Sbjct: 16 CSPKQFVCKDGVTCISKGWRCDREKDCP-----DGSDEEPDVCPHSTVARCPPNEYRCGG 70
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA----------------------------- 380
+ C+ +S+ C+G PDC++G DEGP C A
Sbjct: 71 TEVCIHMSRLCNGVPDCTDGWDEGPHCRGSAARAVHFPETFTLSCSEEAPLTGRRRELIT 130
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+C C C TP G+ C+C +G P+ C D DEC + G+C Q+CTNT+ Y C
Sbjct: 131 NCSLRGCQESCGITPTGSACYCKSGYEIGPDGKACKDFDECSVYGTCSQSCTNTNGGYTC 190
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC EGY +PD +SC A NVP D ++ +++ +I+ L+G+
Sbjct: 191 SCVEGYLPQPDNRSCKAKNVPVDRLPVLLIANSQNIQATSLSGT 234
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----- 244
DC + DE C+ C+ QF C G+CIP+ W CDG DC + + C +Q
Sbjct: 1097 DCGDNSDEAG-CSHSCSSAQFKCNSGRCIPDYWTCDGDNDCGDYSDETHANCTNQATRPP 1155
Query: 245 --CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNG-QVQCAL 299
C + QC + CIP W CD + DC +D +DE H C + C
Sbjct: 1156 GGCHTDEFQCRMDSLCIPLRWRCDGDTDC-----MDLSDEKNCEGVTHMCDPAVKFGCRD 1210
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSK 358
S +CI W+CD + DC DN+DED N C + C + S C+ K
Sbjct: 1211 SARCISKAWVCDGDSDCE-----DNSDED-------NCDACKLSHHVCANDSTICLPPEK 1258
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQ--NPNKTQCVD 415
C+G DC +G DE C+ EN CSH C+ P G +C CP G PN C
Sbjct: 1259 LCNGADDCPDGSDE-KLCD-LCSLENGDCSHNCTVAPGEGVICSCPLGMELGPNNKTCQI 1316
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
C C Q C S CSC EG+ L PD ++C + + + IIFS+ +IR
Sbjct: 1317 QSFCAKHLKCSQRCQQDKFSVKCSCYEGWELEPDMENCKSTDPFK---PFIIFSNRHEIR 1373
Query: 476 RIHLN 480
RI LN
Sbjct: 1374 RIDLN 1378
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 116/286 (40%), Gaps = 80/286 (27%)
Query: 107 RLEKAGMHGENRSP-LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
R+E+A M G NR+ L +K + WP+ L +D Q ILYW D+ + +E V ++ S
Sbjct: 695 RIERAWMDGSNRNMFLSSKTVLWPNGLSLDVPQGILYWVDAFYDRIEMVYLNSSERKTVY 754
Query: 160 ------HNAVLCHP------NELRCG------SSNQCVAL-------------------- 181
H LCH NE R G S+ V L
Sbjct: 755 EGQELIHAFGLCHYKHFLFWNEYRSGSIYKLDSTTGTVTLLRSERPPIFEIRMYDAQQQQ 814
Query: 182 ------------SKFCDGKPD-----CSNGEDEGPFCNA------------ECTPGQFSC 212
S C P C++ + P N +C G+F+C
Sbjct: 815 GSNACRVNNGGCSSLCLATPGGRQCGCADDQILDPANNTSCKANPSYKPPPQCQAGEFAC 874
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + +C + +CIP WLCD + DC
Sbjct: 875 KNSRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPTDRFKCK-NNRCIPLRWLCDGDNDC 933
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
D+ NT C Q CA S +CIP +W CD + DC
Sbjct: 934 GNDEDESNTTC---SARTCPPNQYSCA-SGRCIPISWTCDLDDDCG 975
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 68/151 (45%), Gaps = 11/151 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C E C +S +C+ CDG DC + DE P C+ C +F C +CIP W
Sbjct: 867 CQAGEFACKNS-RCIQERWKCDGDNDCLDNSDEAPELCHQHTCPTDRFKCKNNRCIPLRW 925
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC D + TC C Q CA S +CIP +W CD + DC D +D
Sbjct: 926 LCDGDNDCGNDEDESNTTCSARTCPPNQYSCA-SGRCIPISWTCDLDDDCG-----DRSD 979
Query: 282 EDWD-KFHQCFNGQVQCALSKKCIPHNWLCD 311
E + CF + +CI NW CD
Sbjct: 980 EPASCAYPTCFPLTQFTCNNGRCININWRCD 1010
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 27/39 (69%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
C PNE RCG + C+ +S+ C+G PDC++G DEGP C
Sbjct: 61 CPPNEYRCGGTEVCIHMSRLCNGVPDCTDGWDEGPHCRG 99
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 52/116 (44%), Gaps = 16/116 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCG-MGKCIPE 220
CH +E +C + C+ L CDG DC + DE C P +F C +CI +
Sbjct: 1158 CHTDEFQCRMDSLCIPLRWRCDGDTDCMDLSDEKNCEGVTHMCDPAVKFGCRDSARCISK 1217
Query: 221 SWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+W CDG DC ED SDE N H C N S C+P LC+ DC
Sbjct: 1218 AWVCDGDSDC-EDNSDEDNCDACKLSHHVCAND------STICLPPEKLCNGADDC 1266
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 364 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 421
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T N WP+ L +DY + + W D+ + +
Sbjct: 1499 WDASMP-------RIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDARSDAI 1551
Query: 152 ESVRVDGS 159
S + DGS
Sbjct: 1552 YSAKYDGS 1559
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-----PEIFPL 104
L H LA+++ RN ++ ++ RL + N ++ D P P + L
Sbjct: 1779 LPNAHGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVLHPVLGKL 1838
Query: 105 ----DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + A G NRS L T N + P L ID++ + LYW S +T+ ++DGS
Sbjct: 1839 YWTDGDTINMANTDGSNRSILFT-NQKGPVGLSIDFDTEALYWISSGNSTINRCKLDGSG 1897
Query: 161 NAVL 164
VL
Sbjct: 1898 LEVL 1901
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-----FCNAECTPGQFSCGMGK-CI 218
C P + C C++ CD + DC +G DE P A C P ++ CG + CI
Sbjct: 16 CSPKQFVCKDGVTCISKGWRCDREKDCPDGSDEEPDVCPHSTVARCPPNEYRCGGTEVCI 75
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
S C+G DC DG DE C
Sbjct: 76 HMSRLCNGVPDC-TDGWDEGPHC 97
>gi|7861733|gb|AAF70379.1|AF176832_1 low density lipoprotein receptor related protein-deleted in tumor
[Homo sapiens]
Length = 4599
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 886 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 944
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 945 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1004
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1005 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 1063
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1064 GNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1123
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1124 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCD-ECS 1177
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1178 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1237
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1238 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1276
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 157/375 (41%), Gaps = 70/375 (18%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2677 QNKHKCEENYFSC-PSGRCILNTWICDGQKDCEDGRDEF-HCDSSCSWNQFACSAQKCIS 2734
Query: 220 ESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S+ C+P +WLCD E DC
Sbjct: 2735 KHWICDGEDDC-GDGLDESDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 2793
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F QC + CA
Sbjct: 2794 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCA 2853
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQ 352
+ + W CD + DC D++DE + C E C SS +
Sbjct: 2854 DGRCLLNTQWQCDGDFDCP-----DHSDE------APLNPKCKSAEQSCNSSFFMCKNGR 2902
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNP 408
C+ CD K DC +G DE N+ + + CS C P C C G ++
Sbjct: 2903 CIPSGGLCDNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKDD 2962
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASII 467
KT CVD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I
Sbjct: 2963 GKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS---DEEPFLI 3018
Query: 468 FSSTVDIRRIHLNGS 482
+ +IR+I +GS
Sbjct: 3019 LADHHEIRKISTDGS 3033
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 135 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 195 AKIEPTDRPPILLIANFETIEVFYLNGS 222
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 3532 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3588
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3589 PASPTCSSREYICASDGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3646
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3647 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 3696
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 3697 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 3756
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3757 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3815
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3816 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 3866
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3867 CVCDQNFQER 3876
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3507
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3508 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 3556 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 3584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 883 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 941
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 942 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1001
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 1002 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 1058
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1059 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1118
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1119 DIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCDECSL 1178
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1179 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1216
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3519 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3546
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2621
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2622 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGRDE------FHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S+ +C++ CDG+ DC +G DE
Sbjct: 2728 -SAQKCISKHWICDGEDDCGDGLDE 2751
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2515 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2574
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2575 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2628
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2629 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2671
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 651 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 710
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 711 WCDAYYDHIEKVFLNGTHRKIVYSGREL 738
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 102/268 (38%), Gaps = 37/268 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3155 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 3210
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ G +AL+ F D ++G+ + A T G + SW
Sbjct: 3211 NQDIPG----VIALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----IYSWHAITD 3260
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+ +P+ H C C+ L H C + D+
Sbjct: 3261 IQVYH-SYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT------- 3312
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q +C + KCIP W CD + DD D +DE D C P
Sbjct: 3313 -CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEFRCQPGR 3361
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+CG+ C + CDG+ DC + DE
Sbjct: 3362 FQCGTG-LCALPAFICDGENDCGDNSDE 3388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2344 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2403
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2404 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2463
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFN----GQVQCALSKK 257
+ C + C +G V+C G E N C+ + + + +C + +
Sbjct: 2464 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNAYSEFECG-NGE 2522
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 2523 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 2576
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2577 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2622
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2623 ----KNCNNTDCTH 2632
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4052 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4111
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4112 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4146
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 1048 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDE-KGCNGTIRLCDHKTKFSCWST 1106
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST 273
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1107 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCP- 1164
Query: 274 DDIVDNTDEDW 284
D +DE +
Sbjct: 1165 ----DGSDEGY 1171
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2021 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2080
Query: 166 HPN 168
N
Sbjct: 2081 GSN 2083
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 135 STRCYCEDGF-EITEDG 150
>gi|93102379|ref|NP_061027.2| low-density lipoprotein receptor-related protein 1B precursor [Homo
sapiens]
gi|57015418|sp|Q9NZR2.2|LRP1B_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 1B;
Short=LRP-1B; AltName: Full=Low-density lipoprotein
receptor-related protein-deleted in tumor; Short=LRP-DIT;
Flags: Precursor
gi|119632007|gb|EAX11602.1| low density lipoprotein-related protein 1B (deleted in tumors) [Homo
sapiens]
Length = 4599
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 886 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 944
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 945 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1004
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1005 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 1063
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1064 GNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1123
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1124 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCD-ECS 1177
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1178 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1237
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1238 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1276
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 157/375 (41%), Gaps = 70/375 (18%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2677 QNKHKCEENYFSC-PSGRCILNTWICDGQKDCEDGRDEF-HCDSSCSWNQFACSAQKCIS 2734
Query: 220 ESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S+ C+P +WLCD E DC
Sbjct: 2735 KHWICDGEDDC-GDGLDESDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 2793
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F QC + CA
Sbjct: 2794 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCA 2853
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQ 352
+ + W CD + DC D++DE + C E C SS +
Sbjct: 2854 DGRCLLNTQWQCDGDFDCP-----DHSDE------APLNPKCKSAEQSCNSSFFMCKNGR 2902
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNP 408
C+ CD K DC +G DE N+ + + CS C P C C G ++
Sbjct: 2903 CIPSGGLCDNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKDD 2962
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASII 467
KT CVD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I
Sbjct: 2963 GKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS---DEEPFLI 3018
Query: 468 FSSTVDIRRIHLNGS 482
+ +IR+I +GS
Sbjct: 3019 LADHHEIRKISTDGS 3033
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 135 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 195 AKIEPTDRPPILLIANFETIEVFYLNGS 222
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 3532 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3588
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3589 PASPTCSSREYICASDGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3646
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3647 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 3696
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 3697 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 3756
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3757 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3815
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3816 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 3866
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3867 CVCDQNFQER 3876
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3507
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3508 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 3556 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 3584
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 883 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 941
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 942 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1001
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 1002 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 1058
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1059 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1118
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1119 DIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCDECSL 1178
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1179 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1216
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3519 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3546
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2621
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2622 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGRDE------FHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S+ +C++ CDG+ DC +G DE
Sbjct: 2728 -SAQKCISKHWICDGEDDCGDGLDE 2751
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2515 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2574
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2575 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2628
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2629 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2671
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 651 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 710
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 711 WCDAYYDHIEKVFLNGTHRKIVYSGREL 738
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 102/268 (38%), Gaps = 37/268 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3155 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 3210
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ G +AL+ F D ++G+ + A T G + SW
Sbjct: 3211 NQDIPG----VIALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----IYSWHAITD 3260
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+ +P+ H C C+ L H C + D+
Sbjct: 3261 IQVYH-SYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT------- 3312
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q +C + KCIP W CD + DD D +DE D C P
Sbjct: 3313 -CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEFRCQPGR 3361
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+CG+ C + CDG+ DC + DE
Sbjct: 3362 FQCGTG-LCALPAFICDGENDCGDNSDE 3388
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2344 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2403
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2404 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2463
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFN----GQVQCALSKK 257
+ C + C +G V+C G E N C+ + + + +C + +
Sbjct: 2464 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNAYSEFECG-NGE 2522
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 2523 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 2576
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2577 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2622
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2623 ----KNCNNTDCTH 2632
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4052 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4111
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4112 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4146
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 1048 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDE-KGCNGTIRLCDHKTKFSCWST 1106
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST 273
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1107 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCP- 1164
Query: 274 DDIVDNTDEDW 284
D +DE +
Sbjct: 1165 ----DGSDEGY 1171
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2021 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2080
Query: 166 HPN 168
N
Sbjct: 2081 GSN 2083
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 135 STRCYCEDGF-EITEDG 150
>gi|397504598|ref|XP_003822873.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Pan
paniscus]
Length = 4636
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 923 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 981
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 982 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1041
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1042 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCHPD 1100
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1101 GNCVPDLWRCDGEKDCEDGSDEKGCNGTTRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1160
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1161 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCD-ECS 1214
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1215 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1274
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1275 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1313
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 167/401 (41%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C FSC G+CI +W CDG
Sbjct: 2681 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILNTWICDG 2740
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2741 QKDC-EDGRDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2795
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2796 I-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2853
Query: 340 CHPNEL---------------------RCGSS------NQCVALSKF-CDGKPDCSNGED 371
C P + +CG+ +C+ +++ CDG DC + D
Sbjct: 2854 CIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCPDHSD 2913
Query: 372 EGP-----------------------------FCNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2914 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 2973
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 2974 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDTDECSSGFPCSQQCINTYGTYKCLCTD 3032
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ E +I + +IR+I +GS
Sbjct: 3033 GYEIQPDNPNGCKSLS---GEEPFLILADHHEIRKISTDGS 3070
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 112 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 171
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 172 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 231
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 232 AKIEPTDRPPILLIANFETIEVFYLNGS 259
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 145/368 (39%), Gaps = 85/368 (23%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ +C SS QC+ CDG DC GEDE
Sbjct: 3569 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SSGQCIPAKWKCDGHEDCKYGEDEKSCE 3625
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3626 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3683
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3684 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3733
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3734 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCGGKLT 3793
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3794 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3852
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
A C +K S C P +N QC D +ECL+ G+C C N SY C
Sbjct: 3853 AYCNQIKTSVSCRCKP-------GFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCV 3905
Query: 440 CTEGYTLR 447
C + + R
Sbjct: 3906 CDQNFQER 3913
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3354 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3412
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3413 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3466
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CD++ DC+ N D+ C P+
Sbjct: 3467 DCPENSCSPDYFQCKTTKHCISKLWVCDKDPDCADASDEANCDKK----------TCGPH 3516
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3517 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3544
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 46/296 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAV 163
+ +E + M G +R + ++I P + + +D +YW D ++ + G+
Sbjct: 3230 ENHIEFSNMDGSHRHKVPNQDI--PGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRIS 3287
Query: 164 LCH-------------------PNELRCGSSNQCVALSKFCDGK------PDCSNGEDEG 198
L + L ++ C L GK P +
Sbjct: 3288 LIYTWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADN 3347
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC
Sbjct: 3348 RTCLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLC 3406
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 3407 ALPA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG 3460
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3461 --------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDKDPDCADASDEA 3506
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3560 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSSGQCIPAKWKCDGHEDC-KY 3617
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3618 GEDEKSCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3670
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3671 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3721
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3722 LCKLHFWVCDGEDDCGDNSDEAP 3744
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3473 CSPDYFQCKTTKHCISKLWVCDKDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3532
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3533 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3584
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ S +CIP W CD DC ED +K + C +E
Sbjct: 3585 NCETSCSKDQFQCS-SGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 3635
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3636 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 3689
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3432 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3491
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3492 VCDKDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3544
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3545 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3592
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C SS QC+ CDG DC GEDE
Sbjct: 3593 DQFQC-SSGQCIPAKWKCDGHEDCKYGEDE 3621
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 126/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 920 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 978
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 979 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1038
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K + C+ NE
Sbjct: 1039 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEF 1095
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1096 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTTRLCDHKTKFSCWSTGRCINKAWVCDG 1155
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1156 DIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSL 1215
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1216 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1253
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2600 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2658
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2659 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2716
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2717 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGRDE------FHCDSSCSWNQFAC 2764
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2765 -SAQKCISKHWICDGEDDCGDGLDESDSICGAITCAADMFSCQGSHACVPRHWLCDGERD 2823
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2824 CPNGSDELSTAGCAPNNT 2841
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2552 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2611
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2612 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2665
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2666 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2708
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 35 DIVDNTDEDWDKYFKRILNGTHTLAL---EFNHRNQSLCFIQQQNVSSVRLRCAQINDLL 91
D V+ DW N HT + +QS + + +S R + D +
Sbjct: 636 DNVEGIAVDWIGNNLYWTNDGHTKTINVARLEKASQSRKTLLEGEMSHPR---GIVVDPV 692
Query: 92 NSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
N W D EI R+EKA M G NR VT + WP+ L +D++ + LYWCD++
Sbjct: 693 NGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAY 752
Query: 148 LNTVESVRVDGSHNAVLCHPNEL 170
+ +E V ++G+H ++ EL
Sbjct: 753 YDHIEKVFLNGTHRKIVYSGREL 775
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 116/313 (37%), Gaps = 55/313 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2381 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2440
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2441 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2500
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFNGQVQCAL---SKKC 258
+ C + C +G V+C G E N C+ + + V + +C
Sbjct: 2501 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNVYSEFECGNGEC 2560
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
I + CD C D +DE + + C G C +++CIPH LCD E DC
Sbjct: 2561 IDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGENDC 2614
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2615 G-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE---- 2659
Query: 377 NNKADCENLKCSH 389
+C N C+H
Sbjct: 2660 ---KNCNNTDCTH 2669
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4089 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4148
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4149 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4183
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 111/301 (36%), Gaps = 53/301 (17%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3160 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3219
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
Y LYW D N +E +DGSH + PN+ G +AL+ F D ++G+
Sbjct: 3220 YVNRRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFED-YIYWTDGK 3270
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA-- 253
+ A T G + +W + +P+ H C C+
Sbjct: 3271 TKS-LSRAHKTSGADRISL----IYTWHAITDIQVYH-SYRQPDVSKHLCMINNGGCSHL 3324
Query: 254 -LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
L H C + D+ C Q +C + KCIP W CD
Sbjct: 3325 CLLAPGKTHTCACPTNFYLAADNRT--------CLSNCTASQFRCK-TDKCIPFWWKCD- 3374
Query: 313 EMDCSTDDIVDNTDEDWD-KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DD D +DE D F C P +CG+ C + CDG+ DC + D
Sbjct: 3375 ----TVDDCGDGSDEPDDCPEFK-----CQPGRFQCGTG-LCALPAFICDGENDCGDNSD 3424
Query: 372 E 372
E
Sbjct: 3425 E 3425
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2058 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2117
Query: 166 HPN 168
N
Sbjct: 2118 GSN 2120
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 112 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 171
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 172 STRCYCEDGF-EITEDG 187
>gi|229442315|gb|AAI72897.1| low density lipoprotein-related protein 1B precursor [synthetic
construct]
Length = 1344
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 886 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 944
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 945 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1004
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1005 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 1063
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1064 GNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1123
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1124 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCD-ECS 1177
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1178 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1237
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1238 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1276
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 135 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 195 AKIEPTDRPPILLIANFETIEVFYLNGS 222
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/340 (28%), Positives = 129/340 (37%), Gaps = 90/340 (26%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 883 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 941
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 942 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1001
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 1002 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 1058
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1059 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1118
Query: 381 -----------DCENLKCS---HKCSPTPRGAMCFCPAGQNPNKTQCVDA-------DEC 419
DC++ C H C+ ++C P K C D DEC
Sbjct: 1119 DIDCEDQSDEDDCDSFLCGPPKHPCANDT--SVCLQPEKLCNGKKDCPDGSDEGYLCDEC 1176
Query: 420 -LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
L +G C C+ VCSC EG L D K+C V+
Sbjct: 1177 SLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1216
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 651 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 710
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 711 WCDAYYDHIEKVFLNGTHRKIVYSGREL 738
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 1048 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDEKG-CNGTIRLCDHKTKFSCWST 1106
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST 273
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1107 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCP- 1164
Query: 274 DDIVDNTDEDW 284
D +DE +
Sbjct: 1165 ----DGSDEGY 1171
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 135 STRCYCEDGF-EITEDG 150
>gi|114581079|ref|XP_001156822.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
isoform 1 [Pan troglodytes]
Length = 4636
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 923 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 981
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 982 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1041
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1042 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCHPD 1100
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1101 GNCVPDLWRCDGEKDCEDGSDEKGCNGTTRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1160
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1161 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCD-ECS 1214
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1215 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1274
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1275 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1313
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 167/401 (41%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C FSC G+CI +W CDG
Sbjct: 2681 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFSCPSGRCILNTWICDG 2740
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2741 QKDC-EDGRDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2795
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2796 I-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2853
Query: 340 CHPNEL---------------------RCGSS------NQCVALSKF-CDGKPDCSNGED 371
C P + +CG+ +C+ +++ CDG DC + D
Sbjct: 2854 CIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCPDHSD 2913
Query: 372 EGP-----------------------------FCNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2914 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 2973
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 2974 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTD 3032
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ E +I + +IR+I +GS
Sbjct: 3033 GYEIQPDNPNGCKSLS---GEEPFLILADHHEIRKISTDGS 3070
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 112 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 171
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 172 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 231
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 232 AKIEPTDRPPILLIANFETIEVFYLNGS 259
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 146/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ RC SS QC+ CDG DC GEDE
Sbjct: 3569 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SSGQCIPAKWKCDGHEDCKYGEDEKSCE 3625
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3626 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3683
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3684 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3733
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3734 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCGGKLT 3793
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3794 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3852
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3853 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 3903
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3904 CVCDQNFQER 3913
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3354 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3412
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3413 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3466
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CD++ DC+ N D+ C P+
Sbjct: 3467 DCPENSCSPDYFQCKTTKHCISKLWVCDKDPDCADASDEANCDKK----------TCGPH 3516
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3517 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3544
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 127/296 (42%), Gaps = 46/296 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAV 163
+ +E + M G +R + ++I P + + +D +YW D ++ + G+
Sbjct: 3230 ENHIEFSNMDGSHRHKVPNQDI--PGVIALTLFEDYIYWTDGKTKSLSRAHKTSGADRIS 3287
Query: 164 LCHP-------------------NELRCGSSNQCVALSKFCDGK------PDCSNGEDEG 198
L + L ++ C L GK P +
Sbjct: 3288 LIYSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADN 3347
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC
Sbjct: 3348 RTCLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLC 3406
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 3407 ALPA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG 3460
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3461 --------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDKDPDCADASDEA 3506
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3560 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFRCSSGQCIPAKWKCDGHEDC-KY 3617
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3618 GEDEKSCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3670
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3671 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3721
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3722 LCKLHFWVCDGEDDCGDNSDEAP 3744
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3432 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3491
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3492 VCDKDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3544
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3545 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3592
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC SS QC+ CDG DC GEDE
Sbjct: 3593 DQFRC-SSGQCIPAKWKCDGHEDCKYGEDE 3621
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3473 CSPDYFQCKTTKHCISKLWVCDKDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3532
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3533 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3584
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q +C+ S +CIP W CD DC ED +K + C +E
Sbjct: 3585 NCETSCSKDQFRCS-SGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 3635
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3636 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 3689
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/338 (28%), Positives = 126/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 920 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 978
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 979 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1038
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K + C+ NE
Sbjct: 1039 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEF 1095
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1096 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTTRLCDHKTKFSCWSTGRCINKAWVCDG 1155
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1156 DIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSL 1215
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1216 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1253
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2600 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2658
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2659 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2716
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2717 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGRDE------FHCDSSCSWNQFAC 2764
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2765 -SAQKCISKHWICDGEDDCGDGLDESDSICGAITCAADMFSCQGSHACVPRHWLCDGERD 2823
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2824 CPNGSDELSTAGCAPNNT 2841
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2552 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2611
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2612 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2665
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2666 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2708
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 35 DIVDNTDEDWDKYFKRILNGTHTLAL---EFNHRNQSLCFIQQQNVSSVRLRCAQINDLL 91
D V+ DW N HT + +QS + + +S R + D +
Sbjct: 636 DNVEGIAVDWIGNNLYWTNDGHTKTINVARLEKASQSRKTLLEGEMSHPR---GIVVDPV 692
Query: 92 NSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
N W D EI R+EKA M G NR VT + WP+ L +D++ + LYWCD++
Sbjct: 693 NGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLYWCDAY 752
Query: 148 LNTVESVRVDGSHNAVLCHPNEL 170
+ +E V ++G+H ++ EL
Sbjct: 753 YDHIEKVFLNGTHRKIVYSGREL 775
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 110/300 (36%), Gaps = 51/300 (17%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3160 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3219
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
Y LYW D N +E +DGSH + PN+ G +AL+ F D ++G+
Sbjct: 3220 YVNRRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFED-YIYWTDGK 3270
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA-- 253
+ A T G + SW + +P+ H C C+
Sbjct: 3271 TKS-LSRAHKTSGADRISL----IYSWHAITDIQVYH-SYRQPDVSKHLCMINNGGCSHL 3324
Query: 254 -LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
L H C + D+ C Q +C + KCIP W CD
Sbjct: 3325 CLLAPGKTHTCACPTNFYLAADNRT--------CLSNCTASQFRCK-TDKCIPFWWKCD- 3374
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DD D +DE D C P +CG+ C + CDG+ DC + DE
Sbjct: 3375 ----TVDDCGDGSDEPDD----CPEFKCQPGRFQCGTG-LCALPAFICDGENDCGDNSDE 3425
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 116/313 (37%), Gaps = 55/313 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2381 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2440
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2441 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2500
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFNGQVQCAL---SKKC 258
+ C + C +G V+C G E N C+ + + V + +C
Sbjct: 2501 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNVYSEFECGNGEC 2560
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
I + CD C D +DE + + C G C +++CIPH LCD E DC
Sbjct: 2561 IDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGENDC 2614
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2615 G-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE---- 2659
Query: 377 NNKADCENLKCSH 389
+C N C+H
Sbjct: 2660 ---KNCNNTDCTH 2669
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2058 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2117
Query: 166 HPN 168
N
Sbjct: 2118 GSN 2120
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4089 IEEAARDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4148
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4149 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4183
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 112 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 171
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 172 STRCYCEDGF-EITEDG 187
>gi|74142371|dbj|BAE31943.1| unnamed protein product [Mus musculus]
gi|74152109|dbj|BAE32086.1| unnamed protein product [Mus musculus]
Length = 743
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 103/197 (52%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNEHSCLG 82
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ CV +S+ C+G DC +G DEG C +A+C + C H C PTP G C+C +
Sbjct: 83 TELCVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCNSSFQL 142
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 143 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 201
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 202 LLIANSQNILATYLSGA 218
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+ V
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKVGR 738
Query: 166 H 166
H
Sbjct: 739 H 739
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 69 KAQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCR 110
>gi|432866249|ref|XP_004070758.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oryzias latipes]
Length = 4548
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 104/196 (53%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE D + C NE C
Sbjct: 34 CSPKQFVCKDQVTCISKGWRCDGEKDCP-----DGSDESPDICTHNRPNQCPVNEDGCLD 88
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQN- 407
+ C+ +SK CDG PDCS+G DEGP C KA DC++L C KC+ T G C+C G
Sbjct: 89 LDVCIHMSKLCDGVPDCSDGWDEGPHCREKAPDCDSLGCQFKCAVTHDGPRCYCRHGYEV 148
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D +EC + G+C QTC+NT SY CSC EGY L+PD +SC A N P D +
Sbjct: 149 AADGKTCKDFNECSVYGTCSQTCSNTDGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPVL 208
Query: 467 IFSSTVDIRRIHLNGS 482
+ ++ DIR L+GS
Sbjct: 209 LIANLHDIRCTSLSGS 224
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 157/332 (47%), Gaps = 39/332 (11%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + CG+ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W
Sbjct: 977 CFPLTQFTCGNG-RCININWRCDNDNDCGDNSDEAG-CSHSCSSVQFKCNSGRCIPEYWT 1034
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC + + C +Q C + QC + CIP W CD + DC
Sbjct: 1035 CDGDNDCGDYSDETHANCTNQATRPPGGCHVDEFQCRVDGLCIPMRWRCDGDTDC----- 1089
Query: 277 VDNTDED--WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+D +DE+ H C + C S +CI W+CD + DC DN+DE+
Sbjct: 1090 MDLSDENNCEGVTHMCDPTVKFSCRDSGRCISKAWVCDGDSDCE-----DNSDEE----- 1139
Query: 334 SHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
+ A++C + C S++ C+ K CDG DC + DE FC+ +N CSH CS
Sbjct: 1140 NCEALVCKLSHHMCASNDSICLPAEKLCDGINDCPDSSDE-KFCD-LCSLDNGGCSHNCS 1197
Query: 393 PTP-RGAMCFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P G MC CP G NKT C C C Q C + CSC EG+ L P
Sbjct: 1198 IIPGEGHMCSCPLGMELGADNKT-CQIQSFCAKHLKCSQKCEQDKFNVKCSCYEGWELEP 1256
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ +SC + N + IIFS+ +IRRI L+
Sbjct: 1257 NMESCKSTNPFK---PFIIFSNRHEIRRIDLH 1285
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 158/334 (47%), Gaps = 37/334 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GMGKCIPES 221
C N+ C +++ C++ CDG DC +G DE C E C+P F C G C+P+
Sbjct: 2730 FCLSNQFEC-ANHHCISQHWVCDGSDDCGDGSDEDQKCKTENCSPEAFQCPGSFMCVPQR 2788
Query: 222 WKCDGFVDCLEDGSDEP---------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
WKCDG DC DG+DE NTC + + C +++CIP +++CD ++DCS
Sbjct: 2789 WKCDGDKDC-PDGADESVKAGCMYTNNTCDAK---NEFMCQ-NRQCIPKHFVCDHDIDCS 2843
Query: 273 TDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE + ++ C + QCA + W+CD E DC D +DE
Sbjct: 2844 -----DGSDESPECEYPPCGREEFQCANGRCLNQKKWVCDGEFDCQ-----DRSDE---A 2890
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHK 390
+H C+ + C + +C+ + CD DC +G DE F N + + C+
Sbjct: 2891 RCTHTERKCNESAFMC-RNGKCLNETLLCDRNDDCGDGSDEFNCFINECLNSKLSGCTQL 2949
Query: 391 CSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C G C C G + CVD DEC C Q C NTH S+ C C +G+ L P
Sbjct: 2950 CDDLKIGFKCRCHPGFQLKRDGKTCVDIDECTTTYPCSQHCLNTHGSFHCLCVDGFELSP 3009
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ T D +IF++ +R+++L+GS
Sbjct: 3010 NDP--TFCKSTSDVEPYLIFANRYYLRKLNLDGS 3041
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 117/235 (49%), Gaps = 20/235 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3406 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPTQFQCAITKRCIPRLW 3465
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3466 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 3522
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ + C Q +C + +C+P W CD + DC DN+DE+ + C
Sbjct: 3523 EECAE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----KCSPRQCS 3570
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTP 395
+E C ++ +C+A CDG DC++G DE C K D + +C + C P P
Sbjct: 3571 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDEHG-CVLKCDNDQFQCKNGHCIPIP 3623
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 142/341 (41%), Gaps = 81/341 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +F+C G+CI WKC
Sbjct: 3530 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEEKCSPRQCSESEFACTNGRCIAGRWKC 3588
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + C+ +C N Q QC + CIP W CD + DC +D +DE+
Sbjct: 3589 DGDHDC-ADGSDE-HGCVLKCDNDQFQCK-NGHCIPIPWQCDADPDC-----MDGSDEES 3640
Query: 284 --WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSHNAVL 339
D C + QC + C P +W CD E DC DN+DE+ + + F
Sbjct: 3641 CGGDVGRYCPPDEFQCN-NTLCKPLSWKCDGEDDCG-----DNSDENPELCRRFQ----- 3689
Query: 340 CHPNEL-RCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFC-------------- 376
C P + RC + C+ +SK CDG +C + DE P C
Sbjct: 3690 CPPTRVFRCQNDRVCLQISKRCDGVDNCGDNSDELNCGNTQAPPICEKDELLCSSGRCIS 3749
Query: 377 -------------------------------NNKADCENLKCSHKCSPTPRGAMCFC-PA 404
NN+ C + +H C + C C P
Sbjct: 3750 STLRCNFFNDCEDYGSDEINCKTDTKLNDCRNNRTQCGDGDEAH-CVTNGTDSFCSCKPG 3808
Query: 405 GQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
Q C D +ECL G C C NT SY CSC + +T
Sbjct: 3809 FQKIGHRTCGDVNECLEFGVCSHICNNTKGSYKCSCHKHFT 3849
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 155/441 (35%), Gaps = 135/441 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 3095 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAFRTVLVNS-GLKEPRAVAVDVRYGYL 3153
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ + GM G NRS +V I WP+ L +D+
Sbjct: 3154 YWSDWGDNPHIGRIGMDGTNRSVIVKDKITWPNGLTLDFINDRIYWADAREDYIEFASLD 3213
Query: 137 --------NQDI------------LYWCD----------SHLNTVESVRVDGSHN----- 161
NQDI +YW D L T ++ + H
Sbjct: 3214 GSSRHTVLNQDIPHIFAMTLFEEYIYWTDWETKSINRAHKTLGTNKTTLISTLHRPMDIH 3273
Query: 162 --------AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
AVL HP + G + LS K C + C + CT QF
Sbjct: 3274 IYHPYRQPAVLNHPCQTDNGGCSNLCLLSPGGGYKCACPTNFYLASDQRTCISNCTASQF 3333
Query: 211 SCGMGKCIPESWKCDGFVDC---------------------------------------L 231
C KCIP WKCD DC
Sbjct: 3334 VCKNDKCIPFWWKCDTEDDCGDRSDEPAECPEFKCRPGQFQCGTGICTNPAYICDGDNDC 3393
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
+D SDE N IH C Q +C+ +CIP + C+ + +C D DE C
Sbjct: 3394 QDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCG-----DGEDEKDCPEVTCA 3448
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 3449 PTQFQCAITKRCIPRLWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSG 3499
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 3500 RCIPARWKCDGEDDCGDASDE 3520
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 98/194 (50%), Gaps = 21/194 (10%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHN 262
+C PG+F+C +CI E WKCDG DCL++ + P+ C H C + +C + +CIP
Sbjct: 854 QCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPDLCHEHTCPAERFKCQ-NNRCIPLR 912
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD + DC D+ NT C Q CA S +CIP +W+CD + DC
Sbjct: 913 WLCDGDNDCGNDEDESNTTC---SARTCPPNQYPCA-SGRCIPISWMCDLDDDCG----- 963
Query: 323 DNTDE-DWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D +DE D Y + C P + CG+ +C+ ++ CD DC + DE C++
Sbjct: 964 DRSDEPDTCAYPT-----CFPLTQFTCGNG-RCININWRCDNDNDCGDNSDEAG-CSHSC 1016
Query: 381 DCENLKC-SHKCSP 393
KC S +C P
Sbjct: 1017 SSVQFKCNSGRCIP 1030
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 131/308 (42%), Gaps = 57/308 (18%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
+++KA M G + +T K + WP+ L +D Q ILYW D++ + +E V ++ + V
Sbjct: 684 KIKKAWMDGSHHQVFLTGKTMLWPNGLSLDIPQGILYWVDAYYDQIEMVYLNTTERKVIY 743
Query: 164 ----------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------FCNAECTP 207
LCH + + + ++ K + +E P +A
Sbjct: 744 TGQELNHAFGLCHYKQFLFWNEYRGGSIFKLDQTTKTVTLLRNERPPIFEIRVYDAHQQQ 803
Query: 208 GQFSCGM--GKC------IPESWKC----DGFVD-----CLEDGSDEPNTCIHQCFNGQV 250
G +C G C IP C D +D C + S P QC G+
Sbjct: 804 GTNACRANNGGCGSLCLAIPNGRSCACADDQILDVDNVTCRANPSYVPPP---QCQPGEF 860
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNW 308
C + +CI W CD + DC +DN+DE D H+ C + +C + +CIP W
Sbjct: 861 ACK-NNRCIQERWKCDGDNDC-----LDNSDEAPDLCHEHTCPAERFKCQ-NNRCIPLRW 913
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
LCD + DC D+ NT + +A C PN+ C +S +C+ +S CD DC +
Sbjct: 914 LCDGDNDCGNDEDESNT--------TCSARTCPPNQYPC-ASGRCIPISWMCDLDDDCGD 964
Query: 369 GEDEGPFC 376
DE C
Sbjct: 965 RSDEPDTC 972
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +D+ + LYW D+ L+ + SVR+DGS +
Sbjct: 4023 KIETAAMDGTLRQILVFENIQWPTGLAVDHFNERLYWSDAKLSVIGSVRLDGSDPVI 4079
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 80/190 (42%), Gaps = 15/190 (7%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEE 268
F CG G CI S CDG C + ++ + C ++ C G +C ++ +CI H + CD
Sbjct: 2527 FECGNGDCINYSLTCDGMAHCKDKSDEKQSYCANRICKKGYRRC-MNGRCIGHQFWCD-- 2583
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDE 327
TDD D++DE C G+ QC CI ++ CD+ ++C D ++
Sbjct: 2584 ---GTDDCGDHSDELPCNMTLCKAGEFQCK-DGTCISNHSRCDQVVNCEDASDEMNCQPT 2639
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
D ++F C + C S CDG DC + DE N D LKC
Sbjct: 2640 DCSRFFRLGVK--KATFKSCEKTTLCYLPSWVCDGTNDCGDFSDE----RNCPDNRKLKC 2693
Query: 388 SHKCSPTPRG 397
P G
Sbjct: 2694 PVNFFSCPSG 2703
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E++ + G R LV +I WP+ + IDY + +LYWCD+ + +E + ++ N +
Sbjct: 2030 RIERSRLDGSQRLILVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENREVVL 2089
Query: 167 PNE 169
N+
Sbjct: 2090 GNK 2092
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 116/315 (36%), Gaps = 57/315 (18%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+W+ AP I +A ++G N +V NI+ P+ L ID+ + +Y+ D+ L+
Sbjct: 2344 FWTNWNEQAPSIM-------RASLNGANVLAIVGSNIKTPNGLAIDHRAEKIYFSDATLD 2396
Query: 150 TVESVRVDGSHNAVL-----CHPNELRCGS---------SNQCVALSKFCDGKPDCSNGE 195
+E DGS+ VL HP L + K+ G +
Sbjct: 2397 KIERCEYDGSNRYVLLKNEPVHPFGLSVYGDYIFWTDWVRRAVLRADKYTGGDMKVLRAD 2456
Query: 196 -DEGPFCNAECTPGQFSCGMGKCIPESWKC--------DGFVDCLEDGSDEPNTCIHQCF 246
+ P SC C + C DG V+C G D + C
Sbjct: 2457 IPQQPMGIIALANDTNSCEFSPCRANNGGCQDLCLPTSDGRVNCSCRG-DRQLLEDYTCS 2515
Query: 247 NGQVQCAL-------SKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQC 297
+ V C + CI ++ CD C D +DE + C G +C
Sbjct: 2516 SLNVSCGSVDDFECGNGDCINYSLTCDGMAHCK-----DKSDEKQSYCANRICKKGYRRC 2570
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
++ +CI H + CD TDD D++DE N LC E +C C++
Sbjct: 2571 -MNGRCIGHQFWCD-----GTDDCGDHSDE-----LPCNMTLCKAGEFQC-KDGTCISNH 2618
Query: 358 KFCDGKPDCSNGEDE 372
CD +C + DE
Sbjct: 2619 SRCDQVVNCEDASDE 2633
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 353 RVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 410
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 192 SNGEDEGPFCN---AECTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-PNTCIH--- 243
SNG D P + C+P QF C CI + W+CDG DC DGSDE P+ C H
Sbjct: 18 SNGADGAPKPDNPPRTCSPKQFVCKDQVTCISKGWRCDGEKDC-PDGSDESPDICTHNRP 76
Query: 244 -QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
QC + C CI + LCD DCS
Sbjct: 77 NQCPVNEDGCLDLDVCIHMSKLCDGVPDCS 106
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG- 213
RVDG LC P RC C+ LS D +N E C+ +FSC
Sbjct: 1071 RVDG-----LCIPMRWRCDGDTDCMDLS-------DENNCEGVTHMCDPTV---KFSCRD 1115
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDC 271
G+CI ++W CDG DC ED SDE N C CA + C+P LCD DC
Sbjct: 1116 SGRCISKAWVCDGDSDC-EDNSDEENCEALVCKLSHHMCASNDSICLPAEKLCDGINDC 1173
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGEGRRTIHKETGSGGWPNGLTVDYMERRIVWIDARSDAI 1458
Query: 152 ESVRVDGS 159
S DGS
Sbjct: 1459 YSAMYDGS 1466
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
C NE C + C+ +SK CDG PDCS+G DEGP C +
Sbjct: 79 CPVNEDGCLDLDVCIHMSKLCDGVPDCSDGWDEGPHCREK 118
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + M+G N L ++ P L +D+ LYWCD +T+E +++G+ VL
Sbjct: 3077 IRRMHMNGSNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAFRTVL 3133
>gi|195149514|ref|XP_002015702.1| GL11210 [Drosophila persimilis]
gi|194109549|gb|EDW31592.1| GL11210 [Drosophila persimilis]
Length = 4617
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 103/195 (52%), Gaps = 14/195 (7%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C GQ +C S KCIP W CD E DC D+ D + A+ C E C
Sbjct: 28 HCNEGQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVN-----CTDAVALQCRAFEGEC- 81
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQN 407
+ +C+ LS+FCDG DC + E + C+ + A C + CS+ C TPRG C+CP GQ
Sbjct: 82 HNGECLELSRFCDGHWDCDSDELQ---CDKQDAACAAMNCSYNCKLTPRGPRCYCPGGQV 138
Query: 408 P---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
P N T+CVD DEC G+CDQ C NT SY CSC GY + G C A+NVP EPA
Sbjct: 139 PESLNSTRCVDHDECQEPGTCDQLCRNTPGSYECSCVSGYD-KAKGGRCRAINVPSSEPA 197
Query: 465 SIIFSSTVDIRRIHL 479
++ S + I L
Sbjct: 198 TLTLFSNGSVLHISL 212
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 149/375 (39%), Gaps = 69/375 (18%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C ++ C S N C+A S CDG+ DC +G DE C C QF+C G CIP
Sbjct: 2678 NRTSCDEDQFHCASGN-CIAGSWRCDGEKDCPDGSDE-LGCRRACDGNQFACDNG-CIPA 2734
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC ++ + P C QC S +CI W+CD E DC I +
Sbjct: 2735 SWQCDGKSDCEDNADEGPQCSSRACRPHLFQCKSSGRCITQKWVCDGERDCP---IGSDG 2791
Query: 281 DEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDK 331
D+ QC S CI ++CD + DC DD + + + +
Sbjct: 2792 QGGEDEGPQCGGIAHIPDCPPPAHLCTSGICIDSQYVCDGDEDCPGGDDEYEGCEPAYPQ 2851
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----------------- 374
+ H + C+ ++ CDGK DC +G DE
Sbjct: 2852 HACPGGTQMHQCQ-----DGHCILKNQTCDGKMDCGDGSDEMASLCAHTRGCNGTDDFRC 2906
Query: 375 ----------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAGQN-- 407
C+ + DC + C H+C G C C G
Sbjct: 2907 KNGACISADLLCDRRNDCADFSDEELCNVNECLIPDICEHECVDKVVGYECLCRPGYKLL 2966
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D DEC C QTC NT+ SY C C +GY L D +C A + + +
Sbjct: 2967 PKSPHLCTDIDECHEQQPCSQTCVNTYGSYKCICAKGYAL-VDHHTCKATS---NVSMEL 3022
Query: 467 IFSSTVDIRRIHLNG 481
IFS+ IR++++ G
Sbjct: 3023 IFSNRYYIRQVNMEG 3037
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 155/352 (44%), Gaps = 45/352 (12%)
Query: 157 DGSHNA----VLCHPNELRCGSSNQCVALSKFCDGKPDCS----NGEDEGPFCNAECTPG 208
DGS A + C+ NE C + +C+ ++ DG DC + E F ++C
Sbjct: 936 DGSDQANCEHITCNSNEFTCAKTGRCIQMTWVNDGVVDCGPTDNSDESSEIFFGSKCP-- 993
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+C + CDG +C + DE C +C +G+ C C +CD
Sbjct: 994 EFDCGNGRCRQFTDVCDGIDNC-GNNIDEFG-CDQECGHGEKYCR-PIGCYGEMHMCDGI 1050
Query: 269 MDCSTDDIVDNTD------------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
DC +D D + W + +C + C +CIP CD C
Sbjct: 1051 HDC--EDFSDEANCNQTAKSDNHPVSGWKELGECAAFEFACQDPFECIPDFLRCDGIPHC 1108
Query: 317 STDDIVDNTDED------WDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNG 369
D TDE K+ + V+C HP+ L CG + QC+++ + CDGK DC +
Sbjct: 1109 -----YDKTDETNCTVITATKFDMNETVICEHPDRL-CGFTRQCISVDQLCDGKNDCEDT 1162
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQ 427
DEG C +K +CSH C TP G +C CP PN +C C +C Q
Sbjct: 1163 TDEGFLCADKLCDHGHECSHNCHNTPEGYICSCPDHLFLQPNGKRCNMQHACDHWDTCSQ 1222
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C + Y C C EG+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1223 VCQTSGKGYDCRCLEGFDLAYDKFTCKS--TAPDEPY-VIFTNRQDIKGINL 1271
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 141/331 (42%), Gaps = 74/331 (22%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCIP 219
V C PN+ +C S +C+ L+ CD + DC NGEDE C A C P F C KCIP
Sbjct: 3491 VSCGPNDFQC-DSGRCIPLAWRCDDEHDCPNGEDEPASCFTSKATCDPTYFKCNNSKCIP 3549
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N + C + +C + KCI HN+ CD E+ C S+D+I
Sbjct: 3550 GRWRCDYENDC-GDGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDSSDEIN 3607
Query: 278 DNTDEDWDKF-----HQCFNGQVQCAL-----------------------SKKCIPHNWL 309
N ++F + C N Q QC + KCI W
Sbjct: 3608 CNITCKSNQFKCAAFNTCINKQYQCDGDDDCPDGSDEVNCTCPADHFSCGNGKCIMSRWK 3667
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD DD +D +DE Y + V CH N +C ++ C+ S CDG DC
Sbjct: 3668 CD-----GWDDCLDGSDE---SYATCAHVHCHTNAFKC-NNLICIRNSALCDGVNDCGTN 3718
Query: 370 EDEG-------PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECL- 420
EDE P C +++ CEN C K F GQ C+D + +
Sbjct: 3719 EDESDQVCAALPKCRHDQFQCENDDCISK---------IFRCDGQ----YNCIDGSDEIN 3765
Query: 421 ------IDGSCDQTCTNTHLSYV-CSCTEGY 444
G+C Q C + C C EGY
Sbjct: 3766 CQPPVCGFGTCSQICIEKKAGHFNCKCAEGY 3796
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C +E +CG+ N+C+ CDG DC + DE + C P F C G+CIP +W
Sbjct: 3452 LVCKKDEFQCGN-NRCMTYVWVCDGDIDCPDKSDEANCDDVSCGPNDFQCDSGRCIPLAW 3510
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP + CF + C + KCIP W CD E DC
Sbjct: 3511 RCDDEHDC-PNGEDEPAS----CFTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3561
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFS 334
D +DE + C + +C + KCI HN+ CD E+ C S+D+I N
Sbjct: 3562 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDSSDEINCN---------- 3609
Query: 335 HNAVLCHPNELRCGSSNQCV 354
+ C N+ +C + N C+
Sbjct: 3610 ---ITCKSNQFKCAAFNTCI 3626
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 154/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ +N+ WP++L I + L
Sbjct: 3160 IGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3219
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRCG-- 173
YW D ++E + N + P +LR
Sbjct: 3220 SLNPGLNLHHIFAIAVWEGRIYWSDWETKSIEYCHMYSGQNCSTLLTTIHRPMDLRVFHP 3279
Query: 174 -------SSNQCVAL--SKFCDGKPDCSNGE----------DEGPFCNAECTPGQFSC-G 213
S N C++ S C P+ + D+G C A CT F C
Sbjct: 3280 YRQQQPVSGNPCLSANCSTLCVLSPEAPYYKCICPTNFILADDGRTCRANCTAAHFECVN 3339
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP+TC C GQ QCA +KKCI + +CD C
Sbjct: 3340 TYKCIPFYWRCDTQDDC-GDGSDEPDTCPPFHCEPGQYQCA-NKKCIHPSHICDGVNQCG 3397
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D++DE + DKF CF+ ++C +
Sbjct: 3398 -----DSSDELNCDKF-TCFDTHLKCGATANSSAFCVDNVKRCDGVRNCPGGEDEAGCTP 3451
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+ + W+CD ++DC N D+ V C PN+ +C
Sbjct: 3452 LVCKKDEFQCGNNRCMTYVWVCDGDIDCPDKSDEANCDD----------VSCGPNDFQC- 3500
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD + DC NGEDE C +KA C+ KC++ KC P
Sbjct: 3501 DSGRCIPLAWRCDDEHDCPNGEDEPASCFTSKATCDPTYFKCNNSKCIP 3549
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 140/377 (37%), Gaps = 96/377 (25%)
Query: 93 SWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL+K G NR L + ++ + D+L+W D L+
Sbjct: 2379 TLDLEEQKLYWADARLDKIECTNYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2436
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD---------- 186
V V + + + C +N+C L+ C+
Sbjct: 2437 AVVRANKYTGTDVLFLREHVTRPMGIIAVQNSSINC-EANRCKILNGQCEDVCILNKSGL 2495
Query: 187 GKPDCSNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--- 237
C+ G +G C N C QF+C G+CIP CD CL DGSDE
Sbjct: 2496 ASCHCTQGVLAADGRRCIAPVNTNCGKSQFTCRSGECIPMELTCDNVTHCL-DGSDELRS 2554
Query: 238 ----------------------PNTC--IHQCFNG-------------QVQCALSKKCIP 260
+TC I QC +G Q +CA S +CI
Sbjct: 2555 YCIFRQCPDTHFMCQNHRCIAHEHTCDGIQQCGDGSDESAMLCSCQPDQFRCA-SGECIS 2613
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV---QCALSKKCIPHNWLCDEEMDCS 317
+ +LCD DC D +DE C +G + C S CI +W CD + DC
Sbjct: 2614 NKFLCDNMKDCR-----DFSDEKSCPPRPCESGDMAFEHCENSTICIMPSWRCDGDSDCP 2668
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D TDE N C ++ C S N C+A S CDG+ DC +G DE C
Sbjct: 2669 -----DGTDE----LDCSNRTSCDEDQFHCASGN-CIAGSWRCDGEKDCPDGSDE-LGCR 2717
Query: 378 NKADCENLKCSHKCSPT 394
D C + C P
Sbjct: 2718 RACDGNQFACDNGCIPA 2734
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 86/222 (38%), Gaps = 27/222 (12%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGKCIPESWK 223
+C S C+ CDG DCS+G DE C P F C G+C S
Sbjct: 869 FQCRQSGDCIDNKDLCDGFDDCSDGSDESSDATGPCNPQNCDKDHHFVCN-GRCYQRSLL 927
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C C DGSD+ N C + + CA + +CI W+ D +DC DN+DE
Sbjct: 928 CSSIAYC-SDGSDQANCEHITCNSNEFTCAKTGRCIQMTWVNDGVVDCGP---TDNSDES 983
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP 342
+ F + C + +C +CD D+ +N DE D+ H C P
Sbjct: 984 SEIFFGSKCPEFDCG-NGRCRQFTDVCD-----GIDNCGNNIDEFGCDQECGHGEKYCRP 1037
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C CDG DC + DE CN A +N
Sbjct: 1038 --------IGCYGEMHMCDGIHDCEDFSDEAN-CNQTAKSDN 1070
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 114/304 (37%), Gaps = 66/304 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A + G ++ +I+ P++L +D + LYW D+ L+ +E DGS+ VL H
Sbjct: 2354 IQRAYLTGYGTEKIIRSDIKMPNALTLDLEEQKLYWADARLDKIECTNYDGSNRVVLAH- 2412
Query: 168 NELRCGSSNQCVALSKFCD------------GKPDCSNGED--------EGPFCNAECTP 207
+ A++ + D + + G D P
Sbjct: 2413 -----STPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLFLREHVTRPMGIIAVQN 2467
Query: 208 GQFSCGMGKCIPESWKCD--------GFVDC-------LEDGSDEPNTCIHQCFNGQVQC 252
+C +C + +C+ G C DG C Q C
Sbjct: 2468 SSINCEANRCKILNGQCEDVCILNKSGLASCHCTQGVLAADGRRCIAPVNTNCGKSQFTC 2527
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLC 310
S +CIP CD C +D +DE + F QC + C + +CI H C
Sbjct: 2528 R-SGECIPMELTCDNVTHC-----LDGSDELRSYCIFRQCPDTHFMCQ-NHRCIAHEHTC 2580
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSN 368
D C D +DE +A+L C P++ RC +S +C++ CD DC +
Sbjct: 2581 DGIQQCG-----DGSDE--------SAMLCSCQPDQFRC-ASGECISNKFLCDNMKDCRD 2626
Query: 369 GEDE 372
DE
Sbjct: 2627 FSDE 2630
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNA 162
R+E+A M GE R + T + WP+ L +D+ Q +YW D+ ++ S++ DGS H+
Sbjct: 1401 RIERASMAGEGRRIISTSWQLSTGWPNGLTLDFTQKRVYWVDAKSKSISSIKYDGSEHHV 1460
Query: 163 VLCHPNEL 170
VL P+ L
Sbjct: 1461 VLRQPDIL 1468
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 3965 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 4024
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 198 GPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLE-DGSDEPN---TCIHQCFNGQVQC 252
GP CN GQF C KCIPE+W+CDG DC E D +DE N QC + +C
Sbjct: 26 GPHCNE----GQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVNCTDAVALQCRAFEGEC 81
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDI 276
+ +C+ + CD DC +D++
Sbjct: 82 H-NGECLELSRFCDGHWDCDSDEL 104
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 112 GMHGENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
G H E + T+ + WP SL +D +YWCDS T+E +R+DG+ VL ++
Sbjct: 692 GTHKELLAKGTTEMPMHWPRSLDVDRRTKRIYWCDSLRGTIERMRLDGTGREVLLKSDQF 751
Query: 171 RCGSSNQCVALSKFCDGK 188
S Q A+ + K
Sbjct: 752 HPYSMVQHNAMIYWVGTK 769
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEIFPLDE--RLEKAGMHGENRSPL 121
++ L F + RL Q+ D + + D +F D L ++ + G NR+ L
Sbjct: 305 KDHGLVFFCTNTMLFCRLILEQVRDPESLALDPTKGYMFYTDRTPSLSRSLLDGSNRTAL 364
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
VT +I P+++ +D + +YW D + + +E V +G L
Sbjct: 365 VTTHIYHPNTVTLDLANEHVYWVDVYEDVIERVDYEGQRRWTL 407
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
C GQ +C S KCIP W CD E DC D+ D +
Sbjct: 28 HCNEGQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVN 65
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 115 GENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
ENR+ + + ++ P L +D+ LYWCD L+T+E ++DG + VL
Sbjct: 3079 AENRTQTLHQTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVL 3129
>gi|4235639|gb|AAD13300.1| low density lipoprotein receptor [Sus scrofa]
Length = 782
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 113/334 (33%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 59 CSQDEFRC-QDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWAC 117
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 118 DGDPDC-EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK 175
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 176 -----DKSDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DLSDEQ---- 220
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
N LC PN+ +C S +C++L K C+ DC + DE +C + K CSH
Sbjct: 221 GCVNVTLCEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 279
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 280 ICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEP 339
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A+ A + F++ ++R++ L+ S
Sbjct: 340 LTKACKAIGT----IAYLFFTNRHEVRKMTLDRS 369
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S
Sbjct: 488 WGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISS 539
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 540 IDVNGGNRKTVLEDKTKLAHPFSL 563
>gi|198456290|ref|XP_002138212.1| GA24641 [Drosophila pseudoobscura pseudoobscura]
gi|198135560|gb|EDY68770.1| GA24641 [Drosophila pseudoobscura pseudoobscura]
Length = 4552
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 103/195 (52%), Gaps = 14/195 (7%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C GQ +C S KCIP W CD E DC D+ D + A+ C E C
Sbjct: 20 HCNEGQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVN-----CTDAVALQCRAFEGEC- 73
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQN 407
+ +C+ LS+FCDG DC + E + C+ + A C + CS+ C TPRG C+CP GQ
Sbjct: 74 HNGECLELSRFCDGHWDCDSDELQ---CDKQDAACAAMNCSYNCKLTPRGPRCYCPGGQV 130
Query: 408 P---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
P N T+CVD DEC G+CDQ C NT SY CSC GY + G C A+NVP EPA
Sbjct: 131 PESLNSTRCVDHDECQEPGTCDQLCRNTPGSYECSCVSGYD-KAKGGRCRAINVPSSEPA 189
Query: 465 SIIFSSTVDIRRIHL 479
++ S + I L
Sbjct: 190 TLTLFSNGSVLHISL 204
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 149/375 (39%), Gaps = 69/375 (18%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C ++ C S N C+A S CDG+ DC +G DE C C QF+C G CIP
Sbjct: 2605 NRTSCDEDQFHCASGN-CIAGSWRCDGEKDCPDGSDE-LGCRRACDGNQFACDNG-CIPA 2661
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC ++ + P C QC S +CI W+CD E DC I +
Sbjct: 2662 SWQCDGKSDCEDNADEGPQCSSRACRPHLFQCKSSGRCITQKWVCDGERDCP---IGSDG 2718
Query: 281 DEDWDKFHQCFNGQ--------VQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDEDWDK 331
D+ QC S CI ++CD + DC DD + + + +
Sbjct: 2719 QGGEDEGPQCGGIAHIPDCPPPAHLCTSGICIDSQYVCDGDEDCPGGDDEYEGCEPAYPQ 2778
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----------------- 374
+ H + C+ ++ CDGK DC +G DE
Sbjct: 2779 HACPGGTQMHQCQ-----DGHCILKNQTCDGKMDCGDGSDEMASLCAHTRGCNGTDDFRC 2833
Query: 375 ----------FCNNKADCENLK---------------CSHKCSPTPRGAMCFCPAGQN-- 407
C+ + DC + C H+C G C C G
Sbjct: 2834 KNGACISADLLCDRRNDCADFSDEELCNVNECLIPDICEHECVDKVVGYECLCRPGYKLL 2893
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D DEC C QTC NT+ SY C C +GY L D +C A + + +
Sbjct: 2894 PKSPHLCTDIDECHEQQPCSQTCVNTYGSYKCICAKGYAL-VDHHTCKATS---NVSMEL 2949
Query: 467 IFSSTVDIRRIHLNG 481
IFS+ IR++++ G
Sbjct: 2950 IFSNRYYIRQVNMEG 2964
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 155/352 (44%), Gaps = 45/352 (12%)
Query: 157 DGSHNA----VLCHPNELRCGSSNQCVALSKFCDGKPDCS----NGEDEGPFCNAECTPG 208
DGS A + C+ NE C + +C+ ++ DG DC + E F ++C
Sbjct: 928 DGSDQANCEHITCNSNEFTCAKTGRCIQMTWVNDGVVDCGPTDNSDESSEIFFGSKCP-- 985
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+C + CDG +C + DE C +C +G+ C C +CD
Sbjct: 986 EFDCGNGRCRQFTDICDGIDNC-GNNIDEFG-CDQECGHGEKYCR-PIGCYGEMHMCDGI 1042
Query: 269 MDCSTDDIVDNTD------------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
DC +D D + W + +C + C +CIP CD C
Sbjct: 1043 HDC--EDFSDEANCNQTAKSDNHPVSGWKELGECAAFEFACQDPFECIPDFLRCDGIPHC 1100
Query: 317 STDDIVDNTDED------WDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNG 369
D TDE K+ + V+C HP+ L CG + QC+++ + CDGK DC +
Sbjct: 1101 -----YDKTDETNCTVITATKFDMNETVICEHPDRL-CGFTRQCISVDQLCDGKNDCEDT 1154
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQ 427
DEG C +K +CSH C TP G +C CP PN +C C +C Q
Sbjct: 1155 TDEGFLCADKLCDHGHECSHNCHNTPEGYICSCPDHLFLQPNGKRCNMQHACDHWDTCSQ 1214
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C + Y C C EG+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1215 VCQTSGKGYDCRCLEGFDLAYDKFTCKS--TAPDEPF-VIFTNRQDIKGINL 1263
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 141/331 (42%), Gaps = 74/331 (22%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NAECTPGQFSCGMGKCIP 219
V C PN+ +C S +C+ L+ CD + DC NGEDE C A C P F C KCIP
Sbjct: 3418 VSCGPNDFQC-DSGRCIPLAWRCDDEHDCPNGEDEPASCFTSKATCDPTYFKCNNSKCIP 3476
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N + C + +C + KCI HN+ CD E+ C S+D+I
Sbjct: 3477 GRWRCDYENDC-GDGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDSSDEIN 3534
Query: 278 DNTDEDWDKF-----HQCFNGQVQCAL-----------------------SKKCIPHNWL 309
N ++F + C N Q QC + KCI W
Sbjct: 3535 CNITCKSNQFKCAAFNTCINKQYQCDGDDDCPDGSDEVNCTCPADHFSCGNGKCIMSRWK 3594
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD DD +D +DE Y + V CH N +C ++ C+ S CDG DC
Sbjct: 3595 CD-----GWDDCLDGSDE---SYATCAHVHCHTNAFKC-NNLICIRNSALCDGVNDCGTN 3645
Query: 370 EDEG-------PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECL- 420
EDE P C +++ CEN C K F GQ C+D + +
Sbjct: 3646 EDESDQVCAALPKCRHDQFQCENDDCISK---------IFRCDGQ----YNCIDGSDEIN 3692
Query: 421 ------IDGSCDQTCTNTHLSYV-CSCTEGY 444
G+C Q C + C C EGY
Sbjct: 3693 CQPPVCGFGTCSQICIEKKAGHFNCKCAEGY 3723
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 96/200 (48%), Gaps = 33/200 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C +E +CG+ N+C+ CDG DC + DE + C P F C G+CIP +W
Sbjct: 3379 LVCKKDEFQCGN-NRCMTYVWVCDGDIDCPDKSDEANCDDVSCGPNDFQCDSGRCIPLAW 3437
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDI 276
+CD DC +G DEP + CF + C + KCIP W CD E DC
Sbjct: 3438 RCDDEHDC-PNGEDEPAS----CFTSKATCDPTYFKCNNSKCIPGRWRCDYENDCG---- 3488
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFS 334
D +DE + C + +C + KCI HN+ CD E+ C S+D+I N
Sbjct: 3489 -DGSDELNCQMRNCSESEFRCG-TGKCIKHNYRCDGEIHCDDSSDEINCN---------- 3536
Query: 335 HNAVLCHPNELRCGSSNQCV 354
+ C N+ +C + N C+
Sbjct: 3537 ---ITCKSNQFKCAAFNTCI 3553
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 154/409 (37%), Gaps = 142/409 (34%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ KAGM G N ++ +N+ WP++L I + L
Sbjct: 3087 IGKAGMDGSNPRMIIRENLGWPNALTISFETQQLFWGDAREDTISVSDLDGNHTRLLLAR 3146
Query: 142 ---------------------YWCDSHLNTVESVRVDGSHN-----AVLCHPNELRCG-- 173
YW D ++E + N + P +LR
Sbjct: 3147 SLNPGLNLHHIFAIAVWEGRIYWSDWETKSIEYCHMYSGQNCSTLLTTIHRPMDLRVFHP 3206
Query: 174 -------SSNQCVAL--SKFCDGKPDCSNGE----------DEGPFCNAECTPGQFSC-G 213
S N C++ S C P+ + D+G C A CT F C
Sbjct: 3207 YRQQQPVSGNPCLSANCSTLCVLSPEAPYYKCICPTNFILADDGRTCRANCTAAHFECVN 3266
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
KCIP W+CD DC DGSDEP+TC C GQ QCA +KKCI + +CD C
Sbjct: 3267 TYKCIPFYWRCDTQDDC-GDGSDEPDTCPPFHCEPGQYQCA-NKKCIHPSHICDGVNQCG 3324
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSK------------------------------ 301
D++DE + DKF CF+ ++C +
Sbjct: 3325 -----DSSDELNCDKF-TCFDTHLKCGATANSSAFCVDNVKRCDGVRNCPGGEDEAGCTP 3378
Query: 302 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C+ + W+CD ++DC N D+ V C PN+ +C
Sbjct: 3379 LVCKKDEFQCGNNRCMTYVWVCDGDIDCPDKSDEANCDD----------VSCGPNDFQC- 3427
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE--NLKCSH-KCSP 393
S +C+ L+ CD + DC NGEDE C +KA C+ KC++ KC P
Sbjct: 3428 DSGRCIPLAWRCDDEHDCPNGEDEPASCFTSKATCDPTYFKCNNSKCIP 3476
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 140/377 (37%), Gaps = 96/377 (25%)
Query: 93 SWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL +++ D RL+K G NR L + ++ + D+L+W D L+
Sbjct: 2306 TLDLEEQKLYWADARLDKIECTNYDGSNRVVLAHSTPKHAFAMAV--YGDLLFWTDWVLH 2363
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD---------- 186
V V + + + C +N+C L+ C+
Sbjct: 2364 AVVRANKYTGTDVLFLREHVTRPMGIIAVQNSSINC-EANRCKILNGQCEDVCILNKSGL 2422
Query: 187 GKPDCSNG--EDEGPFC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--- 237
C+ G +G C N C QF+C G+CIP CD CL DGSDE
Sbjct: 2423 ASCHCTQGVLAADGRRCIAPVNTNCGKSQFTCRSGECIPMELTCDNVTHCL-DGSDELRS 2481
Query: 238 ----------------------PNTC--IHQCFNG-------------QVQCALSKKCIP 260
+TC I QC +G Q +CA S +CI
Sbjct: 2482 YCIFRQCPDTHFMCQNHRCIAHEHTCDGIQQCGDGSDESAMLCSCQPDQFRCA-SGECIS 2540
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV---QCALSKKCIPHNWLCDEEMDCS 317
+ +LCD DC D +DE C +G + C S CI +W CD + DC
Sbjct: 2541 NKFLCDNMKDCR-----DFSDEKSCPPRPCESGDMAFEHCENSTICIMPSWRCDGDSDCP 2595
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D TDE N C ++ C S N C+A S CDG+ DC +G DE C
Sbjct: 2596 -----DGTDE----LDCSNRTSCDEDQFHCASGN-CIAGSWRCDGEKDCPDGSDE-LGCR 2644
Query: 378 NKADCENLKCSHKCSPT 394
D C + C P
Sbjct: 2645 RACDGNQFACDNGCIPA 2661
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 86/222 (38%), Gaps = 27/222 (12%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGKCIPESWK 223
+C S C+ CDG DCS+G DE C P F C G+C S
Sbjct: 861 FQCRQSGDCIDNKDLCDGFDDCSDGSDESSDATGPCNPQNCDKDHHFVCN-GRCYQRSLL 919
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C C DGSD+ N C + + CA + +CI W+ D +DC DN+DE
Sbjct: 920 CSSIAYC-SDGSDQANCEHITCNSNEFTCAKTGRCIQMTWVNDGVVDCGP---TDNSDES 975
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP 342
+ F + C + +C +CD D+ +N DE D+ H C P
Sbjct: 976 SEIFFGSKCPEFDCG-NGRCRQFTDICD-----GIDNCGNNIDEFGCDQECGHGEKYCRP 1029
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
C CDG DC + DE CN A +N
Sbjct: 1030 --------IGCYGEMHMCDGIHDCEDFSDEAN-CNQTAKSDN 1062
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 114/304 (37%), Gaps = 66/304 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A + G ++ +I+ P++L +D + LYW D+ L+ +E DGS+ VL H
Sbjct: 2281 IQRAYLTGYGTEKIIRTDIKMPNALTLDLEEQKLYWADARLDKIECTNYDGSNRVVLAH- 2339
Query: 168 NELRCGSSNQCVALSKFCD------------GKPDCSNGED--------EGPFCNAECTP 207
+ A++ + D + + G D P
Sbjct: 2340 -----STPKHAFAMAVYGDLLFWTDWVLHAVVRANKYTGTDVLFLREHVTRPMGIIAVQN 2394
Query: 208 GQFSCGMGKCIPESWKCD--------GFVDC-------LEDGSDEPNTCIHQCFNGQVQC 252
+C +C + +C+ G C DG C Q C
Sbjct: 2395 SSINCEANRCKILNGQCEDVCILNKSGLASCHCTQGVLAADGRRCIAPVNTNCGKSQFTC 2454
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLC 310
S +CIP CD C +D +DE + F QC + C + +CI H C
Sbjct: 2455 R-SGECIPMELTCDNVTHC-----LDGSDELRSYCIFRQCPDTHFMCQ-NHRCIAHEHTC 2507
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSN 368
D C D +DE +A+L C P++ RC +S +C++ CD DC +
Sbjct: 2508 DGIQQCG-----DGSDE--------SAMLCSCQPDQFRC-ASGECISNKFLCDNMKDCRD 2553
Query: 369 GEDE 372
DE
Sbjct: 2554 FSDE 2557
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNA 162
R+E+A M GE R + T + WP+ L +D+ Q +YW D+ ++ S++ DGS H+
Sbjct: 1393 RIERASMAGEGRRIISTSWQLSTGWPNGLTLDFTQKRVYWVDAKSKSISSIKYDGSEHHV 1452
Query: 163 VLCHPNEL 170
VL P+ L
Sbjct: 1453 VLRQPDIL 1460
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A + G N+ LV +++ WP SL +DY LYW D T+E+ R++G V
Sbjct: 3892 LENGILVASLDGSNKKSLVERDVGWPISLSMDYPTGRLYWADYRKGTIETCRLNGKDRNV 3951
Query: 164 L 164
+
Sbjct: 3952 V 3952
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 198 GPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLE-DGSDEPN---TCIHQCFNGQVQC 252
GP CN GQF C KCIPE+W+CDG DC E D +DE N QC + +C
Sbjct: 18 GPHCNE----GQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVNCTDAVALQCRAFEGEC 73
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDI 276
+ +C+ + CD DC +D++
Sbjct: 74 H-NGECLELSRFCDGHWDCDSDEL 96
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 112 GMHGENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
G H E + T+ + WP SL +D +YWCDS T+E +R+DG+ VL ++
Sbjct: 684 GTHKELLAKGTTEMPMHWPRSLDVDRRAKRIYWCDSLRGTIERMRLDGTGREVLLKSDQF 743
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 41
C GQ +C S KCIP W CD E DC D+ D +
Sbjct: 20 HCNEGQFRCVPSLKCIPETWRCDGEYDCGEGDLTDEVN 57
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 115 GENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
ENR+ + + ++ P L +D+ LYWCD L+T+E ++DG + VL
Sbjct: 3006 AENRTQTLHQTMLKNPDGLAVDWVAKNLYWCDKGLDTIEVSQLDGKYRKVL 3056
>gi|327277862|ref|XP_003223682.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Anolis carolinensis]
Length = 4517
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE D C PNE C
Sbjct: 8 CSPKQFACKDQITCISKGWRCDGEKDCP-----DGSDESPDICPQSKVSRCQPNEYNCLG 62
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPAGQN- 407
++ C+ + K C+G+ DC +G DEG C +C ++ C H C PT G MC+C +
Sbjct: 63 TDLCIPMIKLCNGERDCVDGSDEGAHCRELSKNCTDMSCQHHCVPTLNGPMCYCNSSFQL 122
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D DEC + G+C QTCTN SY CSC EGY L+PD KSC A N P + P +
Sbjct: 123 AEDGKSCKDFDECTVYGTCSQTCTNNDGSYRCSCVEGYLLQPDHKSCKAKNEPVERPPIL 182
Query: 467 IFSSTVDIRRIHLNGS 482
+ +++ +I +LNG
Sbjct: 183 LIANSQNIMATYLNGG 198
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/319 (33%), Positives = 150/319 (47%), Gaps = 36/319 (11%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ ++ CD DC + DE C+ C+ QF C G+CIP W CDG DC + +
Sbjct: 965 RCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDYSDE 1023
Query: 237 EPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKF 287
C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1024 THANCTNQATRPPGRCHTDEFQCRLDALCIPMRWHCDGDTDC-----MDSSDEKNCEGVT 1078
Query: 288 HQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
H C N + C S +CI W+CD + DC DN+DE+ + +++C P
Sbjct: 1079 HVCDPNVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLVCKPPSHT 1128
Query: 347 CGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPA 404
C ++ C+ K CDG DC +G DEG C + N CSH C+ P G C CP
Sbjct: 1129 CANNTSICLPPEKLCDGNDDCGDGSDEGKLC-DLCSLNNGGCSHNCTVAPGEGIACSCPL 1187
Query: 405 GQ---NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
G + NKT C C C Q C + CSC +G+ L DG++C + + +
Sbjct: 1188 GMELGSDNKT-CQIQSYCAKHLKCSQKCEQDKYNVKCSCYDGWMLESDGENCRSTDPFK- 1245
Query: 462 EPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1246 --PFIIFSNRHEIRRIDLH 1262
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 162/369 (43%), Gaps = 69/369 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C S +C+ ++ CD + DC +GEDE CN C P +F C +CI + W C
Sbjct: 2669 CPANYFAC-PSGRCIPMTWTCDKENDCEHGEDE-THCNKFCFPEKFECNNHRCISKQWVC 2726
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD-------- 275
DG DC DGSDE + C H C G QC S C+PH WLCD + DC+
Sbjct: 2727 DGADDC-GDGSDEDDRCRHTTCAAGSFQCPNSYMCLPHRWLCDGDKDCADGADESVTAGC 2785
Query: 276 IVDNTDEDWD-------------------------------KFHQCFNGQVQCALSKKCI 304
+ +NT ++ + ++ C + +CA +
Sbjct: 2786 LYNNTCDEREFMCNNRQCIPKHFVCDHDDDCGDGSDESQDCEYTTCGPNEFRCANGRCLS 2845
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQCVALSK 358
W CD E DC D +DE + C E +C + NQC++
Sbjct: 2846 NKLWECDGEFDCH-----DQSDE------APKNPRCSSPESKCNDTFFLCHNNQCISNHL 2894
Query: 359 FCDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCV 414
CD DC +G DE F N + + CS +C G C C G ++ KT C+
Sbjct: 2895 LCDNNNDCGDGSDELNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKDDGKT-CI 2953
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTVD 473
D DEC C Q C NT S+ C C +GY L+PD SC A+ DE +IF++
Sbjct: 2954 DIDECTTTYPCSQMCINTLGSFKCLCVDGYILKPDDPTSCKAIT---DEEPFLIFANRYY 3010
Query: 474 IRRIHLNGS 482
+R++ L+GS
Sbjct: 3011 LRKLSLDGS 3019
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/338 (31%), Positives = 142/338 (42%), Gaps = 75/338 (22%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++ P + RC +N+CV CD DC + DE C+ +FSC G+CI W
Sbjct: 3506 LIVEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCKPRPCSESEFSCANGRCIAGRW 3564
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCDG DC DGSDE C +C Q C S CIP W CD + DC +D +DE
Sbjct: 3565 KCDGDHDC-ADGSDE-KECKPRCDQDQFHCK-SGHCIPLLWRCDADADC-----MDGSDE 3616
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + C + QC + C P W CD E DC DN+DE+ ++ C
Sbjct: 3617 EDCGTRVRTCPLDEFQCN-NTLCKPLAWKCDGEDDCG-----DNSDENHEECLKFQ---C 3667
Query: 341 HPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----------NNKADCENLKC- 387
PN RC + C+ + + CDG +C +G DE FC N+ C N KC
Sbjct: 3668 PPNRPFRCKNDRVCLWIGRQCDGIDNCGDGTDE-QFCESPTVRSCSHEKNEFHCLNGKCI 3726
Query: 388 ---------------------------------------SHKCSPTPRGAMCFCPAG--Q 406
KC T C CP+G +
Sbjct: 3727 SAELQCNFFDDCGDGSDEYKCLTDPKTYGCHTNVSMCGDDAKCVQTNTSVYCTCPSGFQK 3786
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
P+K C D +ECL G C Q C NT SY+C+C + +
Sbjct: 3787 VPDKNSCQDINECLKFGVCSQLCNNTKGSYMCTCAKNF 3824
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 157/441 (35%), Gaps = 135/441 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D +
Sbjct: 3073 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALVVDVQNGYL 3131
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ K GM G NRS +V I WP+ L +DY
Sbjct: 3132 YWTDWGDHSLIGKIGMDGTNRSVIVDTRITWPNGLTLDYINGRIYWADAREDYIEFASLD 3191
Query: 137 --------------------NQDILYWCDSHLNTVESV-RVDGSHNAVLC---------- 165
+D +YW D ++ + G++ +VL
Sbjct: 3192 GSNRHIVLSQDIPHIFALTLYEDYIYWTDWETKSINRAHKTTGANKSVLISTLHRPMDIH 3251
Query: 166 ------------HPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
HP ++ G + LS K C D+G C + CT QF
Sbjct: 3252 IFHPFRQPDVPNHPCKVNNGGCSNLCLLSPGGSFKCACPTNFYLGDDGRTCISNCTASQF 3311
Query: 211 SCGMGKCIPESWKCDGFVDC---------------------------------------L 231
C KCIP WKCD DC
Sbjct: 3312 VCKNDKCIPFWWKCDTEDDCGDRSDEPENCPEFKCRPGQFQCSTGICTNPAFICDGDNDC 3371
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
+D SDE N +H C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3372 QDNSDEANCEVHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDEKDCPEVTCA 3426
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 3427 PNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMRCGLDEFRCKDSG 3477
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC +G DE
Sbjct: 3478 RCIPARWKCDGEDDCGDGSDE 3498
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 148/368 (40%), Gaps = 99/368 (26%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTV---------ESVRV 156
++E+A M G +R+ +T K + WP+ L +D +LYW D+ + + +
Sbjct: 659 KIERAWMDGSHRNVFITSKTVLWPNGLSLDIPGKVLYWVDAFYDRIEMVMLNGTERKIVY 718
Query: 157 DGS---HNAVLCHPN------ELRCGS--------------------------------- 174
DG+ H LCH E R GS
Sbjct: 719 DGNELNHAFGLCHYGNFIFWTEYRSGSIYRLDQNSKAVTLLRNERPPIFEIRMYDAQQQQ 778
Query: 175 --SNQCV----ALSKFCDGKPD---CSNGEDE--GP---FCNA--------ECTPGQFSC 212
SN C S C P+ C+ ED+ GP C +C G+F+C
Sbjct: 779 VGSNNCRVNNGGCSSLCLAIPNGRQCACAEDQILGPDSVTCQVNPSYSPPPQCQHGEFAC 838
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC
Sbjct: 839 KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDC 897
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--- 328
++ N+ C Q CA S +CIP +W CD + DC D +DE
Sbjct: 898 GNNEDESNSTC---SARTCPTNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASC 948
Query: 329 -WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+ F CH + +C+ ++ CD DC + DE C++ KC
Sbjct: 949 AYPTCFPLTQFTCH--------NGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKC 999
Query: 388 -SHKCSPT 394
S +C P
Sbjct: 1000 NSGRCIPV 1007
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 3996 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVVAID 4055
Query: 164 ----LCHP 167
L HP
Sbjct: 4056 SKKGLTHP 4063
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 116/315 (36%), Gaps = 79/315 (25%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN-AECTPGQFSCGMGKCIPESWKCDG 226
E CG+ + C+ S+ CDG C + DE +CN +C G C +C+P C+G
Sbjct: 2502 EFECGNGD-CIDFSQTCDGVAHCKDKSDEKQSYCNNRKCKKGYLHCMNKRCVPIKDWCNG 2560
Query: 227 F---------------------------------------VDCLEDGSDEPNTCIHQC-- 245
VDC ED SDE N C
Sbjct: 2561 VDNCGDNSDEVPCNKTSCAATEFRCRDGTCIGNSSRCNQQVDC-EDASDEMNCTATDCNS 2619
Query: 246 -FNGQV------QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
F + +C + C +W+CD DC D D D + +C C
Sbjct: 2620 FFRLGIKGVTFQKCEHTSMCYAPSWVCDGSNDCG--DYSDEQDCPGVRKSKCPANYFACP 2677
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S +CIP W CD+E DC + DE +H C P + C ++++C++
Sbjct: 2678 -SGRCIPMTWTCDKENDCEHGE-----DE------THCNKFCFPEKFEC-NNHRCISKQW 2724
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVD-AD 417
CDG DC +G DE C + C+ P MC C D AD
Sbjct: 2725 VCDGADDCGDGSDE------DDRCRHTTCAAGSFQCPNSYMCLPHRWLCDGDKDCADGAD 2778
Query: 418 E-----CLIDGSCDQ 427
E CL + +CD+
Sbjct: 2779 ESVTAGCLYNNTCDE 2793
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY + LYWCD+ + +E + ++ G V+
Sbjct: 2007 RIERSRLDGTERVVLVNVSISWPNGISVDYEEGKLYWCDARTDKIERIDLETGDKREVVL 2066
Query: 166 HPNEL 170
N +
Sbjct: 2067 SNNNM 2071
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 59/132 (44%), Gaps = 13/132 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-PEIFPLDERL 108
L H LA+++ RN ++ ++ RL + N ++ D P + PL +L
Sbjct: 1634 LPNAHGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLKGKL 1693
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G NRS L T N + P L IDY Q LYW S T+ +DGS
Sbjct: 1694 YWTDGDNISIANMDGSNRSLLFT-NQKGPVGLSIDYQQSKLYWISSGNGTINRCNLDGSG 1752
Query: 161 NAVLCH-PNELR 171
V+ + N+LR
Sbjct: 1753 LEVIENMKNQLR 1764
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN----AECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C + C P +++C G CI
Sbjct: 8 CSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEYNCLGTDLCI 67
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P C+G DC+ DGSDE C
Sbjct: 68 PMIKLCNGERDCV-DGSDEGAHC 89
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 328 KVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 385
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 3425 CAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDE 3457
>gi|71892452|ref|NP_001025454.1| low-density lipoprotein receptor precursor [Danio rerio]
gi|30385210|gb|AAP22970.1| low density lipoprotein receptor [Danio rerio]
Length = 911
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 171/375 (45%), Gaps = 77/375 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A C P++ CG NQC+ S CDGK DC N DE +C G+F CG G+C+
Sbjct: 62 AKTCRPSQFSCGGRLNQCIPKSWKCDGKADCENNADEEGCDPRQCHDGEFRCGSGQCVTA 121
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
++ CD +DC EDGSDE + C + +C + +C+P W+CD + DC+ DN+
Sbjct: 122 AFVCDDEIDC-EDGSDEVSCPPTTCGSSSFRCN-NAQCVPRLWVCDGDADCA-----DNS 174
Query: 281 DEDWDK---------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DE +K + C + + C S +CI +W CD DC +D++DE
Sbjct: 175 DELPEKCGPGTSKPTKNPCTSMEFHCG-SGECIHGSWKCDGGADC-----LDHSDEQ--- 225
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPF------ 375
+ + C P+E +CG + C+ S+ C+ DC + DE P+
Sbjct: 226 --NCSLPTCRPDEFQCGDGS-CIHGSRQCNHVYDCKDMSDELGCVNATHCEPPYRFKCRS 282
Query: 376 ---------CNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QN 407
CN + DC N CSH C+ G C CP G +
Sbjct: 283 GECISMEKVCNKQRDCRDWSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFRL 342
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
+K +C D DEC +C Q C N SY C C +GY + P K+C A+ A +
Sbjct: 343 VDKRRCEDIDECANPDTCSQICVNQMGSYKCECEDGYQMDPASKACKAIGT----IAYLF 398
Query: 468 FSSTVDIRRIHLNGS 482
F++ ++R++ L+ S
Sbjct: 399 FTNRHEVRKMTLDRS 413
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 114/220 (51%), Gaps = 23/220 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCG--MGK 216
A+ C + +CG+ +C+ CD DC +G DE P C A+ C P QFSCG + +
Sbjct: 20 GALTCDSRQYQCGN-GKCITARWVCDETDDCGDGTDELPAACLAKTCRPSQFSCGGRLNQ 78
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CIP+SWKCDG DC E+ +DE QC +G+ +C S +C+ ++CD+E+DC
Sbjct: 79 CIPKSWKCDGKADC-ENNADEEGCDPRQCHDGEFRCG-SGQCVTAAFVCDDEIDCE---- 132
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK----Y 332
D +DE C + +C + +C+P W+CD + DC+ DN+DE +K
Sbjct: 133 -DGSDEVSCPPTTCGSSSFRCN-NAQCVPRLWVCDGDADCA-----DNSDELPEKCGPGT 185
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E CG S +C+ S CDG DC + DE
Sbjct: 186 SKPTKNPCTSMEFHCG-SGECIHGSWKCDGGADCLDHSDE 224
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALS-KKCIPH 261
C Q+ CG GKCI W CD DC DG+DE P C+ + C Q C +CIP
Sbjct: 24 CDSRQYQCGNGKCITARWVCDETDDC-GDGTDELPAACLAKTCRPSQFSCGGRLNQCIPK 82
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD + DC +N DE+ QC +G+ +C S +C+ ++CD+E+DC
Sbjct: 83 SWKCDGKADCE-----NNADEEGCDPRQCHDGEFRCG-SGQCVTAAFVCDDEIDC----- 131
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
ED S C + RC ++ QCV CDG DC++ DE P
Sbjct: 132 -----EDGSDEVSCPPTTCGSSSFRCNNA-QCVPRLWVCDGDADCADNSDELP 178
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 17/134 (12%)
Query: 37 VDNTDEDW-DKYFKRI--LNGTHTLALEFNHRNQSLCFIQQQNVSSVR-LRCAQINDLL- 91
+ + D W D K+I + G ++A R ++L ++N++ R + I + +
Sbjct: 432 IASRDIYWSDLSLKKIYSIRGAISVATADGSRRKTLF---KENLAKPRAIVVDPIKNFMF 488
Query: 92 -NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
W PA ++EK+G++G +RS LV +I WP+ + +D + LYW DS L+T
Sbjct: 489 WTDWGTPA--------KIEKSGLNGVDRSTLVADDIVWPNGITLDLLTERLYWVDSKLHT 540
Query: 151 VESVRVDGSHNAVL 164
+ S+ V G L
Sbjct: 541 LSSISVQGDGRRTL 554
>gi|426226765|ref|XP_004007507.1| PREDICTED: LOW QUALITY PROTEIN: prolow-density lipoprotein
receptor-related protein 1 [Ovis aries]
Length = 4536
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE + A C PNE C
Sbjct: 7 CSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNEHNCLG 61
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAG--- 405
+ C+ +S+ C+G DC++G DEGP C + C +L C H C PT G C+C
Sbjct: 62 TELCILMSRLCNGVQDCADGSDEGPHCREQRGQCSHLGCQHHCVPTLNGPACYCNTSFQL 121
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P D P
Sbjct: 122 QADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPVDRPPV 180
Query: 466 IIFSSTVDIRRIHLNGS 482
++ +++ +I +L+G+
Sbjct: 181 LLIANSQNILATYLSGA 197
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 102/318 (32%), Positives = 149/318 (46%), Gaps = 45/318 (14%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD + DC +G DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 977 NNGRCININWRCDNEKDCGDGSDEAA-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1035
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1036 SDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1090
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1091 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLACRPP 1140
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
C + ++ C+ K CDG DC +G DEG C+ +CS G +
Sbjct: 1141 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD------------QCSLNNGGCLGM- 1187
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
P+ C C C Q C S CSC EG+ L PDG+SC +++ +
Sbjct: 1188 --ELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPFK-- 1243
Query: 463 PASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1244 -PFIIFSNRHEIRRIDLH 1260
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 119/233 (51%), Gaps = 20/233 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3408 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 3467
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3468 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 3524
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 3525 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 3572
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHKCSP 393
+E C ++ +C+A CDG DC++G DE C + D + +C S C P
Sbjct: 3573 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDEKD-CTPRCDMDQFQCKSGHCIP 3623
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 150/371 (40%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3532 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3590
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3591 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3641
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3642 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3689
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3690 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTTQTSHCKDKKEFLCRNQR 3749
Query: 387 C------------------SHKCSPTPRGAMCFCPAGQNPNKTQCV-------------- 414
C CS P+ C A ++ +CV
Sbjct: 3750 CLSSSLRCNMFDDCGDGSDEEDCSMDPKLTSCATNASICGDEARCVRTEKAAWAKPPRRE 3809
Query: 415 ----------DADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3810 TLPDSRACNPDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3869
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 3870 DDNEIRSLFPS 3880
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 3447 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 3506
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC DGSDEP + C Q +C + +C+P W CD + DC D
Sbjct: 3507 RWKCDGEDDC-GDGSDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 3559
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE+ C + CA + +CI W CD + DC+ D +DE
Sbjct: 3560 NSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTP 3607
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ L CD DC +G DE
Sbjct: 3608 RCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 3640
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 134/359 (37%), Gaps = 95/359 (26%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D I+ D R +E A + G NR +++++I P + +D +YW D
Sbjct: 3180 TLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFEDYVYWTDWETK 3237
Query: 150 TVESV-RVDGSHNAVLCH------------------------------PNELRCGSSNQC 178
++ + G++ +L P R G ++ C
Sbjct: 3238 SINRAHKTTGANKTLLISTLHRPMDLHVFHALRQPDVAHNLGPFATLXPRFPRQGKNSSC 3297
Query: 179 VALSKFCDGK------PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC-- 230
L G P +G C + CT QF C KCIP WKCD DC
Sbjct: 3298 SNLCLLSPGGGHKCACPTNFYLGGDGRNCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGD 3357
Query: 231 -------------------------------------LEDGSDEPNTCIHQCFNGQVQCA 253
+D SDE N IH C Q +C
Sbjct: 3358 HSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCT 3417
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CIP + C+ + +C D DE C Q QC+++K+CIP W+CD +
Sbjct: 3418 NTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRD 3472
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC VD +DE + + C +E RC S +C+ CDG+ DC +G DE
Sbjct: 3473 NDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 3522
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 91/192 (47%), Gaps = 27/192 (14%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHN 262
+C PG+F+C +CI E WKCDG DCL++ + P C H C + + +C + +CIP+
Sbjct: 845 QCQPGEFACSNSRCIQERWKCDGDNDCLDNSDEAPALCHQHTCPSDRFKCE-NNRCIPNR 903
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD + DC + N C Q CA S +CIP +W CD + DC
Sbjct: 904 WLCDGDNDCGNSEDESNATC---SARTCPPNQFSCA-SGRCIPISWTCDLDDDCG----- 954
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE + C P ++ +C+ ++ CD + DC +G DE
Sbjct: 955 DRSDESASCAYP----TCFPLTQFTCNNGRCININWRCDNEKDCGDGSDEA--------- 1001
Query: 383 ENLKCSHKCSPT 394
CSH CS T
Sbjct: 1002 ---ACSHSCSST 1010
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG-- 405
SS +CVA + C+G+ DC + DE N+ L CS C G C C G
Sbjct: 2898 SSGRCVAEALLCNGQDDCGDSSDERGCHVNECLSHKLSGCSQDCEDLKIGFKCRCRPGFR 2957
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDEPA 464
+ C D DEC C Q C NTH SY C C EGY R D SC AV DE
Sbjct: 2958 LKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVT---DEEP 3014
Query: 465 SIIFSSTVDIRRIHLNGS 482
+IF++ +R+++L+GS
Sbjct: 3015 FLIFANRYYLRKLNLDGS 3032
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNG 248
DC +GEDE CN C+ QF C +CI + W CDG DC DGSDE C + C
Sbjct: 2691 DCEHGEDE-THCNKFCSEAQFECQNHRCISKQWLCDGSDDC-GDGSDEAAHCEGKTCGPN 2748
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQCFNGQVQCALSKKCI 304
C + C+P WLCD + DC+ D DE C + + C +++CI
Sbjct: 2749 SFSCPGTHVCVPERWLCDGDKDCA-----DGADESVAAGCLYNSTCDDREFMCQ-NRQCI 2802
Query: 305 PHNWLCDEEMDCS 317
P +++CD + DC+
Sbjct: 2803 PKHFMCDHDRDCA 2815
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 89/227 (39%), Gaps = 52/227 (22%)
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
+C+G DC +G DE P C G+ C S +C+ FVDC ED SDE N
Sbjct: 2565 WCNGADDCGDGSDEIPCNKTACGVGEXRCRAAPGFGTSSRCNQFVDC-EDASDEMNCSAT 2623
Query: 244 QC---FNGQVQ------CALSKKCIPHNWLCDEEMDCS---------------------- 272
C F V+ C + C +W+CD DC
Sbjct: 2624 DCSSYFRLGVKGVRFQPCERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFA 2683
Query: 273 -----TDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DD DE +KF C Q +C + +CI WLCD +DD D +D
Sbjct: 2684 CPSXKEDDCEHGEDETHCNKF--CSEAQFECQ-NHRCISKQWLCD-----GSDDCGDGSD 2735
Query: 327 EDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +H C PN C ++ CV CDG DC++G DE
Sbjct: 2736 E-----AAHCEGKTCGPNSFSCPGTHVCVPERWLCDGDKDCADGADE 2777
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 84/210 (40%), Gaps = 29/210 (13%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
C ++ C A S CDG DC + DE C F+C K
Sbjct: 2641 CERTSLCYAPSWVCDGANDCGDYSDERDCPGVKRPRCPLNYFACPSXK-----------E 2689
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KF 287
D E G DE + C C Q +C + +CI WLCD +DD D +DE +
Sbjct: 2690 DDCEHGEDETH-CNKFCSEAQFECQ-NHRCISKQWLCD-----GSDDCGDGSDEAAHCEG 2742
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
C C + C+P WLCD + DC+ D DE +N+ C E C
Sbjct: 2743 KTCGPNSFSCPGTHVCVPERWLCDGDKDCA-----DGADESVAAGCLYNST-CDDREFMC 2796
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
+ QC+ CD DC++G DE P C
Sbjct: 2797 -QNRQCIPKHFMCDHDRDCADGSDESPECG 2825
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4021 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4077
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 111/290 (38%), Gaps = 53/290 (18%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 658 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 717
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP--FCNAE 204
H LCH E R GS + L + G P + E P F
Sbjct: 718 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGTGGAAPIVTLLRSERPPIFEIRM 774
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN--GQVQCALSKKCIPHN 262
Q G KC + + + C C G QCA
Sbjct: 775 YDAQQQQVGTNKC-----RVNNGGRRRPAPAAPRGACPSLCLATPGSRQCA--------- 820
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C E+ D + + + QC G+ C+ S +CI W CD + DC +
Sbjct: 821 --CAEDQVLDADGVTCLANPSYVPPPQCQPGEFACSNS-RCIQERWKCDGDNDC-----L 872
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE H C + +C +N+C+ CDG DC N EDE
Sbjct: 873 DNSDEAPALCHQHT---CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDE 918
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3155 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3211
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 157 DGSHNAV-----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTP 207
DGS A C PN C ++ CV CDG DC++G DE G N+ C
Sbjct: 2732 DGSDEAAHCEGKTCGPNSFSCPGTHVCVPERWLCDGDKDCADGADESVAAGCLYNSTCDD 2791
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
+F C +CIP+ + CD DC DGSDE C
Sbjct: 2792 REFMCQNRQCIPKHFMCDHDRDC-ADGSDESPEC 2824
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVLC 165
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ G V+
Sbjct: 2007 RIERSRLDGSERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEDREVVL 2066
Query: 166 HPNEL 170
N +
Sbjct: 2067 SSNNM 2071
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 327 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 384
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGS V+
Sbjct: 2332 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSRRYVI 2388
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
A C PNE C + C+ +S+ C+G DC++G DEGP C +
Sbjct: 49 AQRCQPNEHNCLGTELCILMSRLCNGVQDCADGSDEGPHCREQ 91
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1381 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1433
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1434 YSARYDGSGHMEVLRGHEF 1452
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C P + +C G CI
Sbjct: 7 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCI 66
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ 244
S C+G DC DGSDE C Q
Sbjct: 67 LMSRLCNGVQDC-ADGSDEGPHCREQ 91
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKC 258
C+P QF+C CI + W+CDG DC DGSDE P + +C + C ++ C
Sbjct: 7 CSPKQFACRDQITCISKGWRCDGERDC-PDGSDEAPEICPQSKAQRCQPNEHNCLGTELC 65
Query: 259 IPHNWLCDEEMDCS 272
I + LC+ DC+
Sbjct: 66 ILMSRLCNGVQDCA 79
>gi|291391518|ref|XP_002712167.1| PREDICTED: low density lipoprotein-related protein 1B [Oryctolagus
cuniculus]
Length = 4587
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 169/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 874 CPDDQFQC-QNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQVDQFSCGNGRCIPRAW 932
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 933 LCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVH 992
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 993 SCFENQFRCS-SGRCIPGHWACDGDNDCGDFSDETQINCTKEEIHSPAGCNGNEFQCHPD 1051
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
CIP W CD E DC D
Sbjct: 1052 GNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCRSTGRCINKAWICDGDIDCE 1111
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1112 DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGSLCD-ECS 1165
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P +G +C CP G NK C D C C Q C + C
Sbjct: 1166 LNNGGCSNHCSVVPGKGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1225
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1226 SCYEGWRLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1264
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 100/191 (52%), Gaps = 11/191 (5%)
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTD--------EDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C P +LC + M C + + + D E D + C N + C SN+CV
Sbjct: 20 CDPGEFLCHDHMTCISQSWLCDGDPDCPDDSDESLDTCPEAVEIKCPLNHVACLGSNKCV 79
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKT 411
LS+ CDG DCS+G+DEG C ++C+ L C +KC+ C+C G +
Sbjct: 80 HLSQLCDGILDCSDGDDEGIHCRELLSNCQQLNCQYKCAVMRNSTRCYCEDGFEVKEDGR 139
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C D DEC G+C Q C NTH SYVCSC EGY ++PD +SC A N P + P ++ +++
Sbjct: 140 GCKDQDECAAYGTCSQMCMNTHGSYVCSCVEGYIMQPDNRSCKAKNEPTERPPMLLVANS 199
Query: 472 VDIRRIHLNGS 482
I +LNGS
Sbjct: 200 ETIEVFYLNGS 210
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 169/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2632 IRCNSTSLCVLPNWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 2691
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ + KCI +W+CD E DC +D +D +D
Sbjct: 2692 QKDC-EDGLDELH-CDSSCSWNQFACS-AHKCISKHWICDGEDDC--EDGLDESDSICGA 2746
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + N V
Sbjct: 2747 I-TCAADMFNCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENTFMCSNKV- 2804
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ S++ CDG DC +G D
Sbjct: 2805 CIPKQFVCDHDDDCGDGSDESLQCGYRQCSAEEFSCADGRCLLNSQWQCDGDLDCPDGSD 2864
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E PF C+NK DC +
Sbjct: 2865 EAPFNPKCKNAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 2924
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 2925 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCFCTD 2983
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 2984 GYAIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3021
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 145/371 (39%), Gaps = 91/371 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CD DC GEDE
Sbjct: 3520 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCISAKWKCDHHEDCKFGEDEKNCE 3576
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE C+ +C Q +C CI
Sbjct: 3577 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEME-CVTECNEDQFRCKNKAHCI 3634
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3635 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3684
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3685 DDCGDNSDEAPDMCVKFLCPLTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCSGKVT 3744
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNN 378
+ A C +E C ++ +C+ + CD DC +G DE P C +
Sbjct: 3745 YKARPCKKDEFAC-NNKKCIPMDLQCDRLDDCGDGSDEEGCRITPTEYTCEDNVNP-CGD 3802
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C +K S C C G +N QC D +ECL+ G+C C NT SY
Sbjct: 3803 DAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINTKGSY 3853
Query: 437 VCSCTEGYTLR 447
C C + R
Sbjct: 3854 KCVCDHNFQER 3864
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3305 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3363
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3364 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3417
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3418 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3467
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3468 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3495
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 113/261 (43%), Gaps = 39/261 (14%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ + CDG+ DC + DE + C +F C G CIP S +C+ +DC D
Sbjct: 2548 SNRRCVSHDRLCDGENDCGDNSDELDCKVSTCATLEFRCADGTCIPRSARCNQNIDC-AD 2606
Query: 234 GSDEPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C H G ++C + C+ NW+CD DC D D
Sbjct: 2607 ASDEKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPNWICDGSNDCG--DYSDELKCPV 2664
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H+C C S +CI + W+CD + DC D DE H C N+
Sbjct: 2665 QNKHKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------LHCDSSCSWNQ 2712
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT------ 394
C S+++C++ CDG+ DC +G DE C AD N + SH C P
Sbjct: 2713 FAC-SAHKCISKHWICDGEDDCEDGLDESDSICGAITCAADMFNCQGSHACVPRHWLCDG 2771
Query: 395 ----PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2772 ERDCPNGSDELSTAGCAPNNT 2792
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 871 NHSCPDDQFQCQNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQVDQFSCG-NGRCIP 929
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 930 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 989
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF Q +C+ S +CIP +W CD + DC D D T + K H+ C+ NE
Sbjct: 990 CVHSCFENQFRCS-SGRCIPGHWACDGDNDCG--DFSDETQINCTKEEIHSPAGCNGNEF 1046
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 1047 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCRSTGRCINKAWICDG 1106
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1107 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDCPDGSDEGSLCDECSL 1166
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1167 NNGGCSNHCSVVPGKGIVCSCPEGLQLNKDNKTCEIVD 1204
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3345 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3403
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3404 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3457
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 3458 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEEDCK-----PQTCTLK 3506
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3507 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3534
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCD DC +
Sbjct: 3511 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCISAKWKCDHHEDC-KF 3568
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE + +C
Sbjct: 3569 GEDEKNCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MECVTECN 3621
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3622 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3672
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3673 LCKLHFWVCDGEDDCGDNSDEAP 3695
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3383 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3442
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3443 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3495
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3496 EDCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3543
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CD DC GEDE
Sbjct: 3544 DQFQC-SNGQCISAKWKCDHHEDCKFGEDE 3572
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 639 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHSNTLY 698
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 699 WCDAYYDHIEKVFLNGTHRKIVYSGKEL 726
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 124/335 (37%), Gaps = 89/335 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3143 IGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSHRHQV--P 3198
Query: 168 NELRCGSSNQCVALSKF------CDGKPDC------SNGEDEGPFCNA---------ECT 206
N+ G +AL+ F DGK ++G D N+ +
Sbjct: 3199 NQDIPG----VIALTLFEDYIYWTDGKTKSLSRAHKTSGADRLSLINSWHAITDIQVYHS 3254
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-------------IHQCFNGQVQCA 253
Q C+ + C L G C + C Q +C
Sbjct: 3255 YRQPDVSKHLCVINNGGCSHLC-LLAPGKTHTCACPTNFYLAADNRTCLSNCTASQFRCK 3313
Query: 254 LSKKCIPHNWLCDEEMDC-----------------------------------STDDIVD 278
+ KCIP W CD DC +D D
Sbjct: 3314 -TDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGD 3372
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE H C +GQ +C ++KCIP N C+ + DC DE+ ++ N+
Sbjct: 3373 NSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG--------DEEDERDCPENS- 3423
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3424 -CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3457
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G+CI CDG C + ++ C ++ C G C+ +++C+ H+ LCD
Sbjct: 2503 EFECGNGECIDYQLTCDGAPHCKDKSDEKLLYCENRSCRRGFKPCS-NRRCVSHDRLCDG 2561
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2562 ENDCG-----DNSDELDCKVSTCATLEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNN 2615
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+F V +RC S++ CV + CDG DC + DE LKC
Sbjct: 2616 TDCTHFYKLGVKT-TGFIRCNSTSLCVLPNWICDGSNDCGDYSDE------------LKC 2662
Query: 388 ----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2663 PVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDELHCDSSCS 2709
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + +
Sbjct: 4040 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADFELSIIGSVFYDGSDSVISVSS 4099
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4100 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4134
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1036 HSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKG-CNGTIRLCDHKTKFSCRST 1094
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1095 GRCINKAWICDGDIDC-EDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKRDC 1151
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2009 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2068
Query: 166 HPN 168
N
Sbjct: 2069 GSN 2071
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C SN+CV LS+ CDG DCS+G+DEG C N + Q+ C + +
Sbjct: 63 IKCPLNHVACLGSNKCVHLSQLCDGILDCSDGDDEGIHCRELLSNCQQLNCQYKCAVMRN 122
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 123 STRCYCEDGF-EVKEDG 138
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 338 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRHTIIQ 397
Query: 167 PNELR 171
++R
Sbjct: 398 GRQVR 402
>gi|327259681|ref|XP_003214664.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Anolis carolinensis]
Length = 1907
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 156/327 (47%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC S C+A FCDG DC +G DE A C+ +F C G+CI +
Sbjct: 154 CSDKEFRC-SDGSCIAEHWFCDGDTDCKDGSDEENCPSDIPAATCSLEEFQCAYGRCILD 212
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C +G+ C S CI W CD + DC D
Sbjct: 213 IYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCN-SGLCINAGWRCDGDSDCD-----DQ 265
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 266 SDEKNCTTSMCTADQFRCK-SGRCVRSSWRCDGEDDCS-----DNSDEE--NCEDTGSPQ 317
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCSHKCS 392
C P++ CG+ +C+ K C+G DC +G DE P N + + N C+ KC
Sbjct: 318 CAPDQFLCGNG-RCIGQRKLCNGANDCGDGSDESPDQNCRPRTGEENCNLNNGGCAQKCQ 376
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
T C C G + C D +EC +G C Q CTN+ + C C +GY LRPD
Sbjct: 377 MTRGTVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDK 436
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 437 RSCKALG---PEPV-LLFANRIDIRQV 459
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 33 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 92
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 93 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFSCQ-NGYCIRSLWHCDGDNDCG-----DNS 145
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + + +C+ CI +W CD + DC D +DE+
Sbjct: 146 DEQCD-MRKCSDKEFRCS-DGSCIAEHWFCDGDTDCK-----DGSDEE 186
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + RL R IN NS D P A +FP
Sbjct: 1433 LKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1489
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1490 YLFWTDWGHVAKIERANLDGSERKILINSDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1549
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1550 LNGKLRQVLVSQVSHPFAL 1568
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 889 KIECAGMDASGRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYAGLDGSDRRVLIG 948
Query: 167 PN 168
N
Sbjct: 949 SN 950
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G NR L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1197 KLERAGMDGSNRMVLINNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGANRRTLLS 1256
Query: 167 P 167
P
Sbjct: 1257 P 1257
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D L+W DS + +E +DG+H VL
Sbjct: 496 DRIMRANLNGSNVEEVVSTGLESPGGLAVDWIHDKLFWTDSGTSRIEVANLDGTHRKVLL 555
Query: 166 HPN 168
N
Sbjct: 556 WQN 558
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 584 RIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGQNRKAV 641
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E R+DGS VL
Sbjct: 1415 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVL 1471
>gi|158711988|gb|ABW79798.1| vitellogenin receptor [Penaeus monodon]
Length = 1941
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 160/328 (48%), Gaps = 38/328 (11%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + CG SS C+ S+ CDG DC +G DE CN F C G+CI + W+
Sbjct: 78 CQPPQFACGGSSGICLRSSQHCDGSEDCPDGSDEHN-CNTCDETRMFRCLNGQCITKFWR 136
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CD VDCL D SDE P T C +G +CA S +C+P +W+CD E DC+ D+T
Sbjct: 137 CDDDVDCL-DHSDEQGCPVTEESACSSGFFECA-SGECVPRSWVCDGESDCA-----DHT 189
Query: 281 DEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NA 337
DE C Q +C + CI + CD E+DC + DE +H +
Sbjct: 190 DETTCSSAPVTCQPNQFRCK-TGTCIAAAFRCDGELDCPGGE-----DE------AHCST 237
Query: 338 VLCHPNE--LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
+ C ++ +C S +C+++ CD DC +G DEG C+ C+ C H C TP
Sbjct: 238 IQCSDSQDHYQC-KSGECISIQAICDQHEDCRDGSDEGGLCSET--CKVTDCIHLCKMTP 294
Query: 396 RGAMCFCPAG--QNPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
+G C C G +N + C+D +EC + S CD C N + CSC E Y L+ D KS
Sbjct: 295 QGPHCMCKEGYARNTSTNDCIDVNECAANVSVCDHFCQNAVGGFNCSCAEDYMLQADKKS 354
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C + D A + + DIR + L
Sbjct: 355 C-KTTIQGD--ALLFMAQGNDIRMLDLG 379
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/385 (31%), Positives = 159/385 (41%), Gaps = 85/385 (22%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C +C S C+ CD + +C +G DE C C + + GKC P+ W
Sbjct: 1062 VTCSSVHWKC-KSGMCIPKMWVCDQEKECDDGSDETE-CVTSCPDHKVAGIHGKCEPKVW 1119
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCDG DCL DGSDE N C +C N + C+ +K C+PH+ CD E DC D +DE
Sbjct: 1120 KCDGDKDCL-DGSDEEN-CPVECANNEFTCS-NKNCVPHDAKCDGEDDCG-----DGSDE 1171
Query: 283 D--W----DKFHQCFNGQVQCA-------------------------------------- 298
W D C +GQ+ C
Sbjct: 1172 ALPWCQPPDPPVTCPSGQILCERHDVSSPRVCIQQNNVCNGVRDCPLGEDEDCDNCARHE 1231
Query: 299 ---LSKKCIPHNWLCDEEMDCS---------------TDDIVDNTDEDWDKYFSHNAVLC 340
LS+ CIP W+CD E C+ +D VD + + + V C
Sbjct: 1232 FSCLSRGCIPRGWMCDGEFHCTDGSDESQAAGCMIAQGNDTVDLSLNGSEGKAAPVPV-C 1290
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+E CG C+A CDG DC NG DEG C K+ N C H C P+ +C
Sbjct: 1291 GIHEFECGIGG-CIASRLVCDGSADCLNGSDEGSLCA-KSCLGNGGCQHTCKEGPKNRIC 1348
Query: 401 FCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN- 457
C G + Q C+D EC + +C Q C H ++CSC GYTLRPD +SC
Sbjct: 1349 SCWKGFQLAEDQISCIDVKECDDEATCSQKCEERHGYHLCSCLPGYTLRPDRRSCKPAGG 1408
Query: 458 ---VPQDEPASIIFSSTVDIRRIHL 479
V P SI+ S R HL
Sbjct: 1409 DEYVVLVHPGSILNMS----RTFHL 1429
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/281 (33%), Positives = 127/281 (45%), Gaps = 62/281 (22%)
Query: 202 NAECTPGQFSCG--MGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCA 253
+ C P QF+CG G C+ S CDG DC DGSDE N T + +C NGQ
Sbjct: 75 TSACQPPQFACGGSSGICLRSSQHCDGSEDC-PDGSDEHNCNTCDETRMFRCLNGQ---- 129
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLC 310
CI W CD+++DC +D++DE + C +G +CA S +C+P +W+C
Sbjct: 130 ----CITKFWRCDDDVDC-----LDHSDEQGCPVTEESACSSGFFECA-SGECVPRSWVC 179
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D E DC+ D+TDE S V C PN+ RC + C+A + CDG+ DC GE
Sbjct: 180 DGESDCA-----DHTDE---TTCSSAPVTCQPNQFRC-KTGTCIAAAFRCDGELDCPGGE 230
Query: 371 DEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS-----C 425
DE A C ++CS C +G+ + D E DGS C
Sbjct: 231 DE-------AHCSTIQCSDSQDHYQ------CKSGECISIQAICDQHEDCRDGSDEGGLC 277
Query: 426 DQTCTNT---HLSYV------CSCTEGYTLRPDGKSCTAVN 457
+TC T HL + C C EGY C VN
Sbjct: 278 SETCKVTDCIHLCKMTPQGPHCMCKEGYARNTSTNDCIDVN 318
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 110/228 (48%), Gaps = 41/228 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGK 216
+V C+ + C S+ C+ S CD PDC +GEDE P C + +F C G
Sbjct: 979 SVQCNDIQFHCFRSHTCIPRSWKCDLTPDCKDGEDEEDCKESPTCKEK----EFRCSTGS 1034
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEEMD 270
CI + W CDG DC EDGSDE + +C N V C+ S CIP W+CD+E +
Sbjct: 1035 CINKLWTCDGVHDC-EDGSDEK---LDECTN--VTCSSVHWKCKSGMCIPKMWVCDQEKE 1088
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D+ ++ + C + +V + KC P W CD + DC +D +DE+
Sbjct: 1089 C------DDGSDETECVTSCPDHKVA-GIHGKCEPKVWKCDGDKDC-----LDGSDEE-- 1134
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN 377
+ V C NE C + N CV CDG+ DC +G DE P+C
Sbjct: 1135 ----NCPVECANNEFTCSNKN-CVPHDAKCDGEDDCGDGSDEALPWCQ 1177
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 145/390 (37%), Gaps = 71/390 (18%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEIFPL----------- 104
++A+++ RN + V VR A +LL + L + + PL
Sbjct: 745 SVAVDWLRRNVYWIDGTKAAVEVVREDGAFRTELLKAMPHLTSITLAPLLGFMYVSDASA 804
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI--LYWCDSHLNTVESVRVDGSHNA 162
+ + + G+ ++ S +VT ++ P S++ + N DI LYWCD L +ESV DG+
Sbjct: 805 EPFIIRCGLDAKSCSKIVTVDLVQPLSIIFETNPDIKRLYWCDHVLGRIESVAEDGTDRR 864
Query: 163 VLCH----PNELRCGSS-------------------NQCVALSKFCDGKPDCSNGEDEGP 199
V P + S N V + G P+ NGE
Sbjct: 865 VFMENVKSPVSVLVTRSQIMWSEERTSLIYSASKLDNSSVRMMSLDLGVPE--NGERSLK 922
Query: 200 FCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--------------NTCIH- 243
P Q + C+ + C CL D +E TC
Sbjct: 923 ILEVGRKIPEQLATTNHPCLRSNESCSQL--CLGDDFNEKVCACSFGYKLQVDRRTCESV 980
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
QC + Q C S CIP +W CD DC + +ED + C + +C+ + C
Sbjct: 981 QCNDIQFHCFRSHTCIPRSWKCDLTPDCKDGE----DEEDCKESPTCKEKEFRCS-TGSC 1035
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I W CD DC D +DE D+ + V C +C S C+ CD +
Sbjct: 1036 INKLWTCDGVHDCE-----DGSDEKLDECTN---VTCSSVHWKC-KSGMCIPKMWVCDQE 1086
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+C +G DE + D + KC P
Sbjct: 1087 KECDDGSDETECVTSCPDHKVAGIHGKCEP 1116
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---------- 107
LA+++ RN + + V L + + L+++ P L+ R
Sbjct: 438 LAVDWFGRNLYMADSVMKRVLVCSLSGSSCHVLMSNLTHPRGIQLDLENRYVYWTDVNRS 497
Query: 108 -LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
LE+AG+ G R+ L+++ ++WP+ L ID +Y D+H N V V +G+
Sbjct: 498 TLERAGLDGSGRTVLISEGVRWPNGLWIDAPARRIYIADAHTNEVFHVNYNGT 550
>gi|449274623|gb|EMC83701.1| Low-density lipoprotein receptor-related protein 4, partial
[Columba livia]
Length = 1885
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 155/327 (47%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC S C+A FCDG DC +G DE A C+ +F C G+CI +
Sbjct: 131 CSEKEFRC-SDGSCIAEHWFCDGDTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILD 189
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C +G+ C S CI W CD + DC D
Sbjct: 190 IYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCN-SGLCINAGWRCDGDFDCD-----DQ 242
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 243 SDERNCTTSMCTADQFRCK-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENTGTPQ 294
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCSHKCS 392
C P++ CG+ +C+ K C+G DC +G DE P N + + N C+ KC
Sbjct: 295 CAPDQFLCGNG-RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQ 353
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D +EC +G C Q CTN+ + C C +GY LRPD
Sbjct: 354 MVRGMVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDK 413
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 414 RSCKALG---PEPV-LLFANRIDIRQV 436
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 10 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 69
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 70 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFSCQ-NGYCIRSLWHCDGDNDCG-----DNS 122
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + +C+ CI +W CD + DC D +DE+
Sbjct: 123 DEQCD-MRKCSEKEFRCS-DGSCIAEHWFCDGDTDCK-----DGSDEE 163
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS+ VL
Sbjct: 866 KIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGSNRKVLIG 925
Query: 167 PN 168
N
Sbjct: 926 SN 927
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + RL R IN NS D P A +FP
Sbjct: 1410 LKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVLIN---NSLDEPRAIAVFPKKG 1466
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1467 YLFWTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCD 1526
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1527 LNGKLRQVLVSQVSHPFAL 1545
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G R L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1174 KLERAGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGANRHTLLS 1233
Query: 167 P 167
P
Sbjct: 1234 P 1234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 473 DRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 532
Query: 166 HPN 168
N
Sbjct: 533 WQN 535
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 561 RIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAV 618
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++ ++G N ++ + ++ L +D+ LYW D+ NT+E R+DGS VL
Sbjct: 1392 IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSCRKVL 1448
>gi|47217043|emb|CAG10095.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1638
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 142/294 (48%), Gaps = 33/294 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---------IHQCFNGQVQ 251
C C QF C G+CIP+ W CDG DC D SDE NTC + +C +
Sbjct: 580 CARSCANSQFQCTSGRCIPDHWACDGDNDC-GDYSDE-NTCKGGAALLPSVIECGAEEFH 637
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C CIP W CD + DC +D D D + + + C + KCI +W+CD
Sbjct: 638 CVTDGTCIPERWRCDGDKDC--EDGGDEKDCEGTRRMCDPKAKFTCKDTGKCITKSWVCD 695
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGE 370
++DC D +DE+ S +C P + C + ++ C+ K C+GK DC++
Sbjct: 696 GDIDCE-----DRSDEE-----SCETAVCKPPKYPCANDTSVCLTPDKICNGKVDCADRS 745
Query: 371 DEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCD 426
DEGP C+ CSH+C+ P +G +CFCP G + NKT C D C C
Sbjct: 746 DEGPICDLCLVARG-GCSHQCTVAPGKGVVCFCPPGLHLDSSNKT-CEVVDYCSRHLKCS 803
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC G+ + PDG SC + + + A IIFS +IRRI L+
Sbjct: 804 QVCEQYKTTVKCSCYPGWAMDPDGDSCHSTDPFE---AFIIFSIRHEIRRIDLH 854
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+EKA M G NR VT N+ WP+ L +D++ +YWCD++ + +E + ++G+ V+ +
Sbjct: 301 RIEKAWMDGSNRRIFVTSNMLWPNGLTLDHSTSTMYWCDAYYDHIERIYLNGTGRTVVYN 360
Query: 167 PNELR--CGSS------------NQCVALSKFCDGKPDCSNGEDEGPF----CNAECTPG 208
EL G S N V + G E F +A+ G
Sbjct: 361 GKELNHPFGISHYRNYIFWTEYMNASVFQLELSTGDVTLLRSERPPLFGLRVYDAQSQQG 420
Query: 209 QFSCGM--GKC------IPESWKCDGFVDCLEDGSDEPN--TCI--HQCFNGQVQCALSK 256
+C + G C IP C C ++ E N TC H C G +C +
Sbjct: 421 DNACSVNYGGCSTLCLAIPGGRVC----ACADNQVLEKNKVTCADNHTCPAGYFKCN-NN 475
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+CIP WLCD DC +++ D T+ H C Q C ++ +CIP W CD E DC
Sbjct: 476 RCIPKRWLCDGTNDCGSNE--DETNSTCSAQH-CQVDQFPC-MNGRCIPQAWSCDRENDC 531
Query: 317 S 317
Sbjct: 532 G 532
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 394 TPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
T G CFC G + T C D DEC G+C QTC NTH SY CSC EGY L+PD
Sbjct: 2 TRNGTFCFCGDGFEVGADGTSCKDHDECATYGACSQTCENTHGSYSCSCAEGYVLQPDRT 61
Query: 452 SCTA 455
SC A
Sbjct: 62 SCRA 65
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTP-GQFSCG-MGK 216
+ + C E C + C+ CDG DC +G DE C P +F+C GK
Sbjct: 627 SVIECGAEEFHCVTDGTCIPERWRCDGDKDCEDGGDEKDCEGTRRMCDPKAKFTCKDTGK 686
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCS 272
CI +SW CDG +DC ED SDE + C + CA + C+ + +C+ ++DC+
Sbjct: 687 CITKSWVCDGDIDC-EDRSDEESCETAVCKPPKYPCANDTSVCLTPDKICNGKVDCA 742
>gi|149057957|gb|EDM09200.1| similar to Low-density lipoprotein receptor-related protein 4
precursor (LDLR dan) (predicted) [Rattus norvegicus]
Length = 523
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 126/259 (48%), Gaps = 20/259 (7%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+F C G+C+ S CDG DCL+ +E P + QC G+++C S +C+ W+CD
Sbjct: 5 EFQCESGQCVSSSLHCDGNRDCLDHSDEEGCPVSWSLQCPEGEMKCPKSGECVLAEWICD 64
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
++DC +D D D K C Q C +C+P W CD + DC D +D
Sbjct: 65 HDVDC--EDGADEKDCGL-KVISCGPRQWACGSGDQCVPDFWHCDGQSDCR-----DGSD 116
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
E C +E +C ++ C++ S CDG+ DC++G DEG C++ C
Sbjct: 117 EA-----GCAPQRCQDSEFQCATTGACLSFSMVCDGREDCADGSDEGGECSSSM-CSPEL 170
Query: 387 CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGS--CDQTCTNTHLSYVCSCTE 442
C H C +P G++C C G N C D +EC C QTC NT SY+C+C
Sbjct: 171 CYHSCYQSPTGSVCACAPGFELESNGQICRDVNECQQPSGQPCSQTCINTEGSYICACHP 230
Query: 443 GYTLRPDGKSCTAVNVPQD 461
GY L DG +C A + D
Sbjct: 231 GYLLGSDGHTCKATGIKPD 249
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMG-KCI 218
++ C E++C S +CV CD DC +G DE C P Q++CG G +C+
Sbjct: 40 SLQCPEGEMKCPKSGECVLAEWICDHDVDCEDGADEKDCGLKVISCGPRQWACGSGDQCV 99
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
P+ W CDG DC DGSDE +C + + QCA + C+ + +CD DC+ D
Sbjct: 100 PDFWHCDGQSDC-RDGSDEAGCAPQRCQDSEFQCATTGACLSFSMVCDGREDCA-----D 153
Query: 279 NTDE 282
+DE
Sbjct: 154 GSDE 157
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIP 219
+ C P + CGS +QCV CDG+ DC +G DE C +F C G C+
Sbjct: 81 KVISCGPRQWACGSGDQCVPDFWHCDGQSDCRDGSDEAGCAPQRCQDSEFQCATTGACLS 140
Query: 220 ESWKCDGFVDCLEDGSDE----------PNTCIHQCFN 247
S CDG DC DGSDE P C H C+
Sbjct: 141 FSMVCDGREDC-ADGSDEGGECSSSMCSPELCYHSCYQ 177
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ R+E+AGM G +R LV + + P+S+ +D ++W D + + SV +DGS ++
Sbjct: 316 EPRIEQAGMDGNSRKILVNQGLGRPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGIRMM 375
>gi|427795113|gb|JAA63008.1| Putative prolow-density lipoprotein receptor-related protein 1,
partial [Rhipicephalus pulchellus]
Length = 3609
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/325 (32%), Positives = 160/325 (49%), Gaps = 26/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSC-GMGKCIPESW 222
C ++ +C + +C++L CDG+PDCS+G DE P C +C +F C G+CIP +W
Sbjct: 1729 CARDQFQC-TDGECISLLNRCDGQPDCSDGSDEPPACRMRQCGDSEFKCNSTGQCIPNAW 1787
Query: 223 KCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
KCDG DCL++ ++P N + QC + +C L++ CI ++ CD + DC NT
Sbjct: 1788 KCDGAGDCLDNSDEDPSLNCTLRQCKANEFKC-LNQVCILDSFYCDGDHDCEDGSDEPNT 1846
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---KYFSHNA 337
E H+C Q C + +CI ++ C+ DD D +DE D K + NA
Sbjct: 1847 CEK----HRCRENQFACN-NGRCISNHATCN-----GWDDCRDGSDEKPDLCHKQITKNA 1896
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C C + N CV S C+G+ DC + DE N+ + CS C P G
Sbjct: 1897 S-CPDGNFLCANKN-CVNDSLLCNGENDCGDFSDEDQCNVNECELSTHACSQLCEDRPIG 1954
Query: 398 AMCFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C C G P + C D DEC C C NT+ S+ C+C +GY G++C A
Sbjct: 1955 YKCSCHPGFEPKYDGRICEDVDECTTKYPCTHHCRNTYGSFACTCADGYFSIDAGRTCKA 2014
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLN 480
+ + A ++ S+ IR+I L+
Sbjct: 2015 NSSVR---AHLLLSNRYYIRQIDLH 2036
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 114/240 (47%), Gaps = 30/240 (12%)
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
Q L ++ + +W CD + DC +D +DE C + + C ++CIP +
Sbjct: 46 QRPVRLWERRVXKSWHCDGKPDC-----LDASDEKGCGNVNCSSNEFLCENRQECIPVQF 100
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD + DC +DN+DE SH + C C ++ +C+ +++ CD PDC +
Sbjct: 101 VCDSDHDC-----MDNSDEKNCTSVSH--LKCPKPSHTCDNNTRCIEVTRLCDKVPDCKD 153
Query: 369 GEDEGPFCN----NKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID 422
G DEG C+ N DCE+ C PTP G C+C G N C D C
Sbjct: 154 GSDEGGLCDEGLCNPNDCEDF-----CRPTPYGKTCYCRDGLQLAINGRSCTDKKPCSQW 208
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS--IIFSSTVDIRRIHLN 480
G C Q C S+ C+C +GY L D +C + +PA+ +IFS+ ++R + LN
Sbjct: 209 GVCSQKCFQLKHSHKCTCEKGYELASDMFTCKST-----DPATPYVIFSNRHELRSVDLN 263
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 118/235 (50%), Gaps = 36/235 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C NE +C ++ +C+ S C+G+ +C + DE CN+ C +F C + G CI + W+
Sbjct: 2578 CLDNEFQC-ANGRCIKASMHCNGEFNCEDRSDEAN-CNSTCRSNEFYCKVVGHCIHKEWR 2635
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG VDC DGSDE I C G+ QC + CI ++ CD E DC D +DED
Sbjct: 2636 CDGDVDC-ADGSDEQGCNIAACRAGEFQCQ-NGACITSSFQCDNEDDCG-----DGSDED 2688
Query: 284 WDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ C G+ +C S C+ + +CD + DC DN+DED + C
Sbjct: 2689 HNHCLHFACPPGKFKCKNSL-CVQGSGVCDGKDDCG-----DNSDEDTPQCHH-----CK 2737
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKC 391
P+E RC S +C+A + FC+G DC +G DE GP C CSH C
Sbjct: 2738 PHEFRC-KSQRCIASNLFCNGVDDCGDGTDEEDCDTGP-------CRFGTCSHTC 2784
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMGKC 217
LC P + +C + QC+ S+ CDGKP C+ G+DE C P QF C C
Sbjct: 2371 FLCSPGQFQC-ADEQCIQPSQLCDGKPQCTGGDDEHDCDKYTCLPSQFKCPGNGTSQAYC 2429
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
I + +CDG +DC G DE N C Q +C S +CIP W CD + DC
Sbjct: 2430 ISVASRCDGHIDCAMGGEDELNCPPKTCPANQFKCNNS-RCIPDVWTCDGDNDC-----F 2483
Query: 278 DNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE + +C +C+ S +CIP W CD + DCS ED
Sbjct: 2484 DGSDEPPNCADRECPPNSFRCS-SGRCIPLAWRCDGDYDCS-------DREDEGSSCDEE 2535
Query: 337 AVLCHPNELRC 347
A+ CHP+ RC
Sbjct: 2536 AMSCHPSYFRC 2546
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWK 223
C ++ C + +C+ CD + DC +G DE P C C+PGQF C +CI S
Sbjct: 2332 CTSSQFVCEKTYKCIPSLWRCDTQDDCGDGSDEPPSCPPFLCSPGQFQCADEQCIQPSQL 2391
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQC----ALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG C G DE + + C Q +C CI CD +DC+ +
Sbjct: 2392 CDGKPQC-TGGDDEHDCDKYTCLPSQFKCPGNGTSQAYCISVASRCDGHIDCA----MGG 2446
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNA 337
DE C Q +C S +CIP W CD + DC +D+ + D +
Sbjct: 2447 EDELNCPPKTCPANQFKCNNS-RCIPDVWTCDGDNDCFDGSDEPPNCADRE--------- 2496
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C PN RC SS +C+ L+ CDG DCS+ EDEG C+ +A
Sbjct: 2497 --CPPNSFRC-SSGRCIPLAWRCDGDYDCSDREDEGSSCDEEA 2536
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 87/176 (49%), Gaps = 15/176 (8%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R D ++ C NE C C+ CDG DC++G DE A C G+F C
Sbjct: 2606 RSDEANCNSTCRSNEFYCKVVGHCIHKEWRCDGDVDCADGSDEQGCNIAACRAGEFQCQN 2665
Query: 215 GKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G CI S++CD DC DGSDE N C+H C G+ +C S C+ + +CD + DC
Sbjct: 2666 GACITSSFQCDNEDDC-GDGSDEDHNHCLHFACPPGKFKCKNS-LCVQGSGVCDGKDDCG 2723
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DN+DED + H C + +C S++CI N C+ DD D TDE+
Sbjct: 2724 -----DNSDEDTPQCHHCKPHEFRCK-SQRCIASNLFCN-----GVDDCGDGTDEE 2768
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 114/287 (39%), Gaps = 79/287 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC----------GM 214
C ++ +C + C+ + CD +P+C + DE +CT +
Sbjct: 1593 CKGDQFKC-ARGPCIPSTYVCDFEPECPDASDEINCPKPDCTRHPMTLHPNLLLVNCERT 1651
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEE 268
CI W CDG DC D SDE N Q QV C L+ CIP +W CD +
Sbjct: 1652 TACIHLGWICDGQNDCW-DFSDEENC---QTTTPQVSCPAMSFRCLNGLCIPDSWRCDRD 1707
Query: 269 MDC--------STD-------------------------------DIVDNTDEDWD-KFH 288
MDC S+D D D +DE +
Sbjct: 1708 MDCEDGHNGSLSSDEKGCEYKCARDQFQCTDGECISLLNRCDGQPDCSDGSDEPPACRMR 1767
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELR 346
QC + + +C + +CIP+ W CD DC +DN+DED S N L C NE +
Sbjct: 1768 QCGDSEFKCNSTGQCIPNAWKCDGAGDC-----LDNSDED----PSLNCTLRQCKANEFK 1818
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC------NNKADCENLKC 387
C + C+ S +CDG DC +G DE C N+ C N +C
Sbjct: 1819 C-LNQVCILDSFYCDGDHDCEDGSDEPNTCEKHRCRENQFACNNGRC 1864
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 144/389 (37%), Gaps = 127/389 (32%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+++E+ +G +R L++++ Q P L + D ++W D + V + V+
Sbjct: 1391 DKIERCDFNGGDRHVLLSEHPQHPFDLAV--YGDFVFWTDWVAHAVLRANKHTGADVVVL 1448
Query: 166 HPNELR-----------------------CGSSNQCVALSK---FCDGKPDCSNGEDEGP 199
N +R G +QCV + +C P S D G
Sbjct: 1449 RKNVVRPMGIIAVANDTNDCTLSPCSTLNGGCEDQCVVATNGTIYCQCFPGRSLMSD-GR 1507
Query: 200 FCN---AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------TC---IHQCFN 247
C A CT +F CG G CIP CDG C DGSDE TC ++C N
Sbjct: 1508 RCAVKIANCTSAEFQCGDGACIPFELACDGVQAC-PDGSDENVIDCAMLTCPEGFYRCHN 1566
Query: 248 G-----------------------------QVQCALSKKCIPHNWLCD---------EEM 269
G Q +CA CIP ++CD +E+
Sbjct: 1567 GRCVSKNRVCDGLDACGDYSDELNCTCKGDQFKCARG-PCIPSTYVCDFEPECPDASDEI 1625
Query: 270 DCSTDD----------------------------IVDNTDEDWDKFH----QCFNGQVQC 297
+C D I D ++ WD Q QV C
Sbjct: 1626 NCPKPDCTRHPMTLHPNLLLVNCERTTACIHLGWICDGQNDCWDFSDEENCQTTTPQVSC 1685
Query: 298 A------LSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
L+ CIP +W CD +MDC + ++DE +Y C ++ +C +
Sbjct: 1686 PAMSFRCLNGLCIPDSWRCDRDMDCEDGHNGSLSSDEKGCEY------KCARDQFQC-TD 1738
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+C++L CDG+PDCS+G DE P C +
Sbjct: 1739 GECISLLNRCDGQPDCSDGSDEPPACRMR 1767
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G NR LV ++Q + L ID+ +D LYWCDS +T+E V +DG+ +
Sbjct: 1020 KIERAALDGSNRIVLVNVSVQLVNDLAIDFEEDKLYWCDSRTDTIERVNLDGTGRETVFP 1079
Query: 167 P 167
P
Sbjct: 1080 P 1080
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 12/71 (16%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL-----VTKNIQWPSSLVIDYNQDILYWCDSHL 148
WD AP R+E+A M G+ R + VT+ WP+ L +D+ +YW D+
Sbjct: 385 WDKEAP-------RIEQASMSGDGRRVVLRIDEVTQGGAWPNGLTLDFVALRIYWIDARS 437
Query: 149 NTVESVRVDGS 159
++V + R DGS
Sbjct: 438 DSVHTSRYDGS 448
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDE 237
V S CDGKPDC + DE N C+ +F C +CIP + CD DC+ D SDE
Sbjct: 56 VXKSWHCDGKPDCLDASDEKGCGNVNCSSNEFLCENRQECIPVQFVCDSDHDCM-DNSDE 114
Query: 238 PN--TCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
N + H +C C + +CI LCD+ DC
Sbjct: 115 KNCTSVSHLKCPKPSHTCDNNTRCIEVTRLCDKVPDC 151
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ +A + G N LV + WP+ + +D+ +YW D + VE+ +DG ++
Sbjct: 2976 RIGRANLDGSNPRTLVDARVIWPTGIAVDHAAGRIYWADRKASLVETANIDGKLRHIV 3033
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
++K+ ++G ++T +I+ P+ + ID+ LYW D+ L+ +E +G VL
Sbjct: 1350 IQKSYLNGYELESIITTDIRMPNGIAIDHQLQKLYWSDARLDKIERCDFNGGDRHVLLSE 1409
Query: 166 ---HPNEL 170
HP +L
Sbjct: 1410 HPQHPFDL 1417
>gi|195392674|ref|XP_002054982.1| GJ19044 [Drosophila virilis]
gi|194149492|gb|EDW65183.1| GJ19044 [Drosophila virilis]
Length = 1964
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/385 (30%), Positives = 166/385 (43%), Gaps = 86/385 (22%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPES 221
LCH ++L C + +CV + CDGK DC + DE C A C G F C G CI S
Sbjct: 1087 LCHAHQLAC-DNGKCVDYTLVCDGKNDCGDNSDE-LRCKEAASCDRGMFQCSSGSCIASS 1144
Query: 222 WKCDGFVDCLEDGSDEPNTC--------IHQCFNGQ--------------------VQCA 253
W+CDG +DC D SDE + C +H+C GQ + C
Sbjct: 1145 WECDGRIDC-SDASDEHDKCGQRQCPAQMHRCLLGQCLDAQLVCDGHNDCGDLSDELNCE 1203
Query: 254 LSK---------------------KCIPHNWLC-DEEMDCSTDDIVDNTDEDWDKFHQCF 291
K +C + LC D E+ C+ +++ D C
Sbjct: 1204 QRKGAAATGAAVNISCGTLTTPMYQCASNMQLCLDMEVRCNGSAECPRGEDEADCGELCS 1263
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAV------------ 338
+ QC SK+CI + CD+E DC+ D +DE+ ++Y + N
Sbjct: 1264 IYEFQCRDSKQCIRQEFRCDKERDCA-----DGSDEEHCEQYANGNETSTHLAGESVSAR 1318
Query: 339 -LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C P+ C +CV +S C+G DC+NG DEGP C + C C H+C TP G
Sbjct: 1319 RACKPHLFDC-HDGECVDMSHVCNGFADCTNGNDEGPQCTSA--CSKPLCQHRCQATPAG 1375
Query: 398 AMCFCPAGQN--PNKTQCVDADECLIDGS---CDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
A+C C G ++ CVD DEC + C Q C NT SY C C + L D S
Sbjct: 1376 AVCTCLDGYRLASDQRSCVDIDECAVPAEQQPCAQLCENTPGSYQCQCHADFMLSQDRSS 1435
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRI 477
C ++ A ++F+S ++R +
Sbjct: 1436 CKSIQ----SGAPLLFTSYNEVRNL 1456
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 165/358 (46%), Gaps = 57/358 (15%)
Query: 153 SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFS 211
S GS +A C ++ +C + C+ +K CDG+ DC++ DE C P F
Sbjct: 45 SAAATGSAHA-RCDADQFQC-RNGVCILQAKMCDGRSDCTDNTDELECDYKMCRQPHWFP 102
Query: 212 CGM--GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFN-GQVQCALSK------KCIPH 261
C G C+ C+G +C G ++ C H+ FN G+ C+ + CIP
Sbjct: 103 CAQPHGACLAAELICNGVDNC--PGGEDELQCPHRLVFNFGRRNCSQYEYMCQDHSCIPL 160
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWD---------KFHQCFNGQVQCALSKKCIPHNWLCDE 312
+++CD + DC+ DN+DE H C NG+ L +K WLCD
Sbjct: 161 DFMCDGKSDCA-----DNSDETAGCKQAATSCTSGHLCSNGRC---LHRK----QWLCD- 207
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN--ELRCGSSNQCVALSKFCDGKPDCSNGE 370
DD D +DE S LC P+ + C + C+ LS+ CDG+P+CS+G
Sbjct: 208 ----GVDDCGDGSDE------SDCENLCQPSMGKFMCRNHGSCLPLSQVCDGQPNCSDGS 257
Query: 371 DEGPFCNNKADCENLKC--SHKCSPTP-RGAMCFCPAGQN--PNKTQCVDADECL-IDGS 424
DE C K DC +C C P GA CFCP G K +C D +EC D
Sbjct: 258 DESESCRAKPDCSTKQCPPGASCHMMPASGAECFCPDGFRLLKFKDKCEDINECQERDDL 317
Query: 425 CDQTCTNTHLSYVCSCTEGYTL-RPDGKSCTAVNVPQ-DEPASIIFSSTVDIRRIHLN 480
C Q C NT Y C+C GY L + ++C A+++ + A +++++ V + +HL
Sbjct: 318 CSQRCENTSGGYRCACDAGYELDASNNRTCHALDIGSGKQSALLLYTTQVTVMGMHLK 375
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 29/215 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMG-KCIPESW 222
E RC SS +C+ ++ C+G DC++ DE +C QF+C G +C+ +S
Sbjct: 1003 EFRCRSSGECLTMAHRCNGHQDCADSSDESDCDTIKRVKVKCGLTQFTCHDGERCLDKSK 1062
Query: 223 KCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CDG DC +D SDE + C Q+ C + KC+ + +CD + DC D
Sbjct: 1063 RCDGHKDC-DDNSDELHCAQFDKTKLCHAHQLACD-NGKCVDYTLVCDGKNDCG-----D 1115
Query: 279 NTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
N+DE + C G QC+ S CI +W CD +DCS D D D+ +
Sbjct: 1116 NSDELRCKEAASCDRGMFQCS-SGSCIASSWECDGRIDCS--DASDEHDKCGQRQ----- 1167
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C RC QC+ CDG DC + DE
Sbjct: 1168 --CPAQMHRC-LLGQCLDAQLVCDGHNDCGDLSDE 1199
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V NI WP+ + +D +Q+ +YW D+ L +V++VR DGS +
Sbjct: 503 IARASMDGTRSQPIVADNIHWPNGIALDMHQERIYWVDAKLGSVQTVRPDGSARRTVLDG 562
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 563 MLKHPYGL 570
>gi|47229537|emb|CAG06733.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2303
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 153/361 (42%), Gaps = 72/361 (19%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ S CD + DC NG DE C+ C+ QF C +CIP+ W CDG DC D
Sbjct: 475 SGRCIPKSWTCDKENDCENGADEA-HCDKFCSATQFQCANNRCIPQRWVCDGADDC-GDS 532
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQ 289
SDE + C C QC S CIP W CD + DC D TDE +
Sbjct: 533 SDEDSQCKTKTCSPEAFQCPGSHMCIPQRWKCDGDKDCP-----DGTDESVKAGCVFNNT 587
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + C +++CIP +++CD + DC D +DE + + C P E RC +
Sbjct: 588 CSSNEFMCQ-NRQCIPKHFVCDHDNDCG-----DGSDESQECEYP----TCGPKEFRCAN 637
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPF----------CNNKA------------------- 380
+ S CDG DC + DE P CNN A
Sbjct: 638 GRCLIQSSWECDGDFDCHDQSDEAPLNPRCGGPANKCNNTAYACSNGNCVNETLLCDRKD 697
Query: 381 --------------DCENLK---CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLI 421
+C N K CS C G C C G ++ C+D DEC
Sbjct: 698 DCGDGSDELNCFINECLNSKLSGCSQLCEDLKIGFKCRCHPGFRLKDDRKTCIDIDECTT 757
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C Q C NTH S+ C C EGY L P+ T DE +IF++ +R+++L+G
Sbjct: 758 TYPCTQRCINTHGSFHCLCVEGYHLSPENP--TICKSTSDEEPFLIFANRYYLRKLNLDG 815
Query: 482 S 482
S
Sbjct: 816 S 816
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 113/228 (49%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C S ++C+ C+ + +C GEDE C P QF C + K CIP W
Sbjct: 1245 VCLPSQFKCTSPSRCIPGIFRCNSQDNCGEGEDEKDCPEVTCAPNQFQCAITKRCIPRVW 1304
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 1305 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 1361
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DED C
Sbjct: 1362 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----KCVPRQCS 1409
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C K D + +C +
Sbjct: 1410 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDENG-CEVKCDSDQYQCKN 1455
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 106/220 (48%), Gaps = 17/220 (7%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSC 212
+ DG C ++ C +++C+ CD + DC + DE C +C PGQF C
Sbjct: 1156 LAADGKQCLSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDRSDEPADCPEFKCRPGQFQC 1214
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G G C ++ CDG DC D SDE N IH C Q +C +CIP + C+ + +C
Sbjct: 1215 GTGICTNPAYICDGDNDC-HDNSDEANCDIHVCLPSQFKCTSPSRCIPGIFRCNSQDNCG 1273
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+ DE C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 1274 -----EGEDEKDCPEVTCAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP---- 1319
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C +E RC S +C+ CDG+ DC + DE
Sbjct: 1320 ANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDASDE 1359
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 103/214 (48%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 1284 VTCAPNQFQCAITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 1343
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC D SDEP + C Q +C + +C+P W CD + DC D
Sbjct: 1344 RWKCDGEDDC-GDASDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 1396
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DED QC + C + +CI W CD + DC+ D +DE+ V
Sbjct: 1397 NSDEDKCVPRQCSESEFACT-NGRCIAGRWKCDGDHDCA-----DGSDEN------GCEV 1444
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C +S C+ L CD PDC +G DE
Sbjct: 1445 KCDSDQYQCKNS-HCIPLRWHCDADPDCLDGSDE 1477
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 105/234 (44%), Gaps = 36/234 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +F+C G+CI WKC
Sbjct: 1369 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDKCVPRQCSESEFACTNGRCIAGRWKC 1427
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-- 282
DG DC DGSDE N C +C + Q QC S CIP W CD + DC +D +DE
Sbjct: 1428 DGDHDC-ADGSDE-NGCEVKCDSDQYQCKNS-HCIPLRWHCDADPDC-----LDGSDEEK 1479
Query: 283 -DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDEDWDKYFSHNAVL 339
D C + QC + C P W CD E DC +D+ + ED+ AVL
Sbjct: 1480 CDSGVVRHCPKDEFQCN-NTLCKPQGWKCDGEDDCGDNSDENPEECGEDFYGSAFRQAVL 1538
Query: 340 CH---------------------PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H + RC + C+ LSK CDG +C + DE
Sbjct: 1539 FHRYVLIHSELLVCLSVIFQCPPTRQFRCLNDRVCLPLSKRCDGVNNCGDNSDE 1592
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 107/243 (44%), Gaps = 31/243 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C RC + +CV +C+G+ DC + DE FCN CT QF C G CI S
Sbjct: 335 VCKKGYRRC-VNGRCVGHGSWCNGRDDCGDNSDE-IFCNTTLCTADQFQCRDGSCISNSS 392
Query: 223 KCDGFVDCLEDGSDEPNTCIHQC---FNGQV------QCALSKKCIPHNWLCDEEMDCST 273
KCD VDC ED DE N C F+ V +C + C +WLCD DC
Sbjct: 393 KCDQKVDC-EDAGDEMNCTATDCSSYFHLGVKGVTFQKCEFTTLCYAPSWLCDGANDCG- 450
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D D + +C C S +CIP +W CD+E DC + DE
Sbjct: 451 -DFSDERNCPGSSKEKCPTPFFACP-SGRCIPKSWTCDKENDCE-----NGADE------ 497
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKC--SHK 390
+H C + +C ++N+C+ CDG DC + DE C K E +C SH
Sbjct: 498 AHCDKFCSATQFQC-ANNRCIPQRWVCDGADDCGDSSDEDSQCKTKTCSPEAFQCPGSHM 556
Query: 391 CSP 393
C P
Sbjct: 557 CIP 559
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 107/226 (47%), Gaps = 24/226 (10%)
Query: 156 VDGSH-----NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPG 208
VDGS + C +E RC S +C+ CDG+ DC + DE C+ C P
Sbjct: 1313 VDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDASDEPKEECDERTCEPY 1372
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
QF C +C+P W+CD DC D SDE QC + C + +CI W CD +
Sbjct: 1373 QFRCKNNRCVPGRWQCDYDNDC-GDNSDEDKCVPRQCSESEFACT-NGRCIAGRWKCDGD 1430
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC+ D +DE+ + +C + Q QC S CIP W CD + DC +D +DE
Sbjct: 1431 HDCA-----DGSDENGCEV-KCDSDQYQCKNS-HCIPLRWHCDADPDC-----LDGSDE- 1477
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+K S C +E +C ++ C CDG+ DC + DE P
Sbjct: 1478 -EKCDSGVVRHCPKDEFQCNNT-LCKPQGWKCDGEDDCGDNSDENP 1521
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E A M G R LV KNIQWP+ L +DY + LYW D+ L+ + SVR++GS +AVL
Sbjct: 1827 KIETAAMDGTMRETLVEKNIQWPTGLAVDYFNERLYWADAKLSLICSVRLNGS-DAVLRQ 1885
Query: 167 P 167
P
Sbjct: 1886 P 1886
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 101/231 (43%), Gaps = 27/231 (11%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEE 268
F CG G CI + CDG C + ++ + C ++ C G +C ++ +C+ H C+
Sbjct: 300 FECGNGDCINYTLTCDGMAHCKDKSDEKQSYCANRVCKKGYRRC-VNGRCVGHGSWCNGR 358
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDE 327
DC DN+DE + C Q QC CI ++ CD+++DC D ++ T
Sbjct: 359 DDCG-----DNSDEIFCNTTLCTADQFQCR-DGSCISNSSKCDQKVDCEDAGDEMNCTAT 412
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
D YF H V + +C + C A S CDG DC + DE N KC
Sbjct: 413 DCSSYF-HLGVKGVTFQ-KCEFTTLCYAPSWLCDGANDCGDFSDE----RNCPGSSKEKC 466
Query: 388 SHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADEC---LIDGSCDQTCTNTHL 434
PTP A CP+G+ P C ++C + CD+ C+ T
Sbjct: 467 -----PTPFFA---CPSGRCIPKSWTCDKENDCENGADEAHCDKFCSATQF 509
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 903 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRAVAVDVRYGYL 961
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ + GM G NRS ++ + I WP+ L +D+ D +YW D+ + + +D
Sbjct: 962 YWSDWGDNPHIGRIGMDGTNRSIIIEEKITWPNGLTLDFVNDRIYWADAREDYIAFASLD 1021
Query: 158 GSH 160
G+
Sbjct: 1022 GTR 1024
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPESWKC 224
+ RC + C+ LSK CDG +C + DE P C +F C G+CI ++C
Sbjct: 1564 QFRCLNDRVCLPLSKRCDGVNNCGDNSDELDCQVPPPIPVCQKHEFQCSNGRCISSIFRC 1623
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCA 253
+ F DC + GSDE N T ++ C + + C
Sbjct: 1624 NYFNDCEDYGSDEINCNKKDTALNDCRSNRTVCG 1657
>gi|3201962|gb|AAC39254.1| low density lipoprotein receptor, partial [Sus scrofa]
Length = 801
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 149/327 (45%), Gaps = 38/327 (11%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
C +C+A CD DC +G DE C P F C CIPE W CDG DC
Sbjct: 84 CCQDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWACDGDPDC- 142
Query: 232 EDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
EDGSDE P + C + C S +CI +W CD + DC D
Sbjct: 143 EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK-----DK 196
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ C + QC+ CI + CD E DC D +DE NA L
Sbjct: 197 SDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDEQ----GCVNATL 246
Query: 340 CH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPR 396
C PN+ +C S +C++L K C+ DC + DE +C + K CSH C+
Sbjct: 247 CEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKI 305
Query: 397 GAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P K+C A
Sbjct: 306 GYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEPLTKACKA 365
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ A + F++ ++R++ L+ S
Sbjct: 366 IGT----IAYLFFTNRHEVRKMTLDRS 388
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 133/334 (39%), Gaps = 85/334 (25%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MGKCIPESWKCDGFVDCL 231
+C++ CDG +C +G DE + C G FSCG + +CIPESW+CDG DC
Sbjct: 6 GKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC- 64
Query: 232 EDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E+GSDE P TC F C KCI ++CD + DC +D +DE
Sbjct: 65 ENGSDEEGCSPKTCSQDEF-----CCQDGKCIAPKFVCDSDRDC-----LDGSDEASCPT 114
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVL------- 339
C QC S CIP W CD + DC D +DE W ++ SH++ L
Sbjct: 115 PTCGPASFQCN-SSTCIPELWACDGDPDCE-----DGSDE-WPQHCRSHSSSLPERSNNP 167
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFC 376
C E C S +C+ S CDG DC + DE C
Sbjct: 168 CSALEFHC-HSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQC 226
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD------------------- 417
+ + DC+++ C +C P +C+ D
Sbjct: 227 DREYDCKDMSDEQGCV---NATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKE 283
Query: 418 ----ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 284 CGTNECLDNKGGCSHICNDLKIGYECLCPEGFQL 317
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCIPHNWLCD 266
F C GKCI W CDG +C +DGSDE TC+ C G C +CIP +W CD
Sbjct: 1 FQCQDGKCISYKWICDGNTEC-KDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCD 59
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC + +DE+ C + C KCI ++CD + DC +D +D
Sbjct: 60 GQQDCE-----NGSDEEGCSPKTCSQDEF-CCQDGKCIAPKFVCDSDRDC-----LDGSD 108
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
E S C P +C SS C+ CDG PDC +G DE P
Sbjct: 109 E-----ASCPTPTCGPASFQCNSST-CIPELWACDGDPDCEDGSDEWP 150
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--N 92
D DW + Y+ + GT ++A + ++L Q++ + ++ +
Sbjct: 448 DGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTL--FQEKGSKPRAIVVDPVHGFMYWT 505
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++
Sbjct: 506 DWGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSIS 557
Query: 153 SVRVDGSHNAV-------LCHPNEL 170
S+ V+G + L HP L
Sbjct: 558 SIDVNGGNRKTVLEDKTKLAHPFSL 582
>gi|291243160|ref|XP_002741471.1| PREDICTED: vitellogenin receptor, putative-like [Saccoglossus
kowalevskii]
Length = 799
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 158/321 (49%), Gaps = 25/321 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMG-KCIPES 221
C + +C +++C+ S CD DC +G DE C A C+ FSC +G CIP +
Sbjct: 66 CSQTDFKC-RNDKCIPGSWQCDNDDDCEDGSDEEESICQARTCSSDHFSCEIGGTCIPLA 124
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W+CD DC +G+DE + C + + C+ + +CI W+CD++ DC DN+D
Sbjct: 125 WRCDREADC-NNGADERDCGGVTCASDEFSCS-NGRCITARWICDQDDDCG-----DNSD 177
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLC 340
E+ C + C S C+P+ WLCD + DC +D++DE + S + C
Sbjct: 178 EEGCPAPTCDAAEFMCNGSY-CMPNRWLCDGDYDC-----LDHSDESEELCGSESPPSPC 231
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
E C S+ +C+ S CDG DC +G DE N+ D N C H C P C
Sbjct: 232 SEREFTC-SNQECIHYSWKCDGDEDCHDGSDEFNCDINECDTNNGGCYHTCHDLPISHYC 290
Query: 401 FCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C G + + C D +EC I G C Q C N + C+C EGY L D ++C A+
Sbjct: 291 SCTPGYVLDVDGKTCNDINECDIPGQCSQNCENVKGGFKCTCIEGYELDDDHRTCKALG- 349
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
DEP ++ + DIR I+L
Sbjct: 350 --DEP-RLLIADRKDIREINL 367
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 15/124 (12%)
Query: 54 GTHTLA---LEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEK 110
GT+T+ LE H + +N+ R A + D + W P ++E+
Sbjct: 462 GTNTIEVAHLEKRHEEIQRTVLIDENLDEPR---AIVLDPIEGWMYWTDWGEP--PKIER 516
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------V 163
AGM+G+ R LV ++IQWP+ L IDY ++W D+ LN + S ++G +
Sbjct: 517 AGMNGQQRQVLVDEDIQWPNGLAIDYVTRHIFWADAKLNMIASTNLNGGERVNIIRSETI 576
Query: 164 LCHP 167
L HP
Sbjct: 577 LSHP 580
>gi|328705261|ref|XP_001944152.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1-like
[Acyrthosiphon pisum]
Length = 1768
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 159/362 (43%), Gaps = 78/362 (21%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPESWKCDGFVDCLE 232
+S +C+ CDG PDC NG+DE N C +F C G CIP +W+CDG VDC
Sbjct: 994 TSGECIQRIFLCDGNPDCINGQDELNCLNQSCNNITEFRCNSGNCIPATWECDGEVDCF- 1052
Query: 233 DGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
DGSDE +C +C + Q C + +CI H + C+ + DC D++DE+ + +
Sbjct: 1053 DGSDEHYSCATKKCKDDQFSCT-NGRCISHKFTCNGKDDCG-----DSSDENGCSSNHAY 1106
Query: 292 -------------------------------NGQVQCA------------------LSKK 302
NG +C +K+
Sbjct: 1107 MTKRVSKVCNEKTEFECENTMGHCIPIKARCNGTSECKHLEDELNCGCQKSNFFECQNKR 1166
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDED------WDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C+ +WLCD+ DC D +DE ++ S++ V + + +C+ L
Sbjct: 1167 CVLKDWLCDKHDDCG-----DGSDESQKACDMLSEHLSNSVVSSKDCDGYLCKNQECIPL 1221
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
+ C+ K +C +G DEG C C ++ CSH C TP+G C C G + C
Sbjct: 1222 DQACNKKINCKDGSDEGDLCG--LSCIHMDCSHTCQETPKGGKCTCYHGYKLAQDGITCR 1279
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEG-YTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D +EC D C Q CTN+ SY CSC Y LR D SC A+ D +++SS +
Sbjct: 1280 DINECEDDNLCTQYCTNSDGSYSCSCLNSDYILRADKSSCKAIGPTMD----LVYSSVDE 1335
Query: 474 IR 475
IR
Sbjct: 1336 IR 1337
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 128/292 (43%), Gaps = 37/292 (12%)
Query: 206 TPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKC 258
P F C KCIP+ + CD +C+ D SDE + + C G+ +C+ C
Sbjct: 19 APEYFECDNKRKCIPKEFVCDKSNECI-DKSDESHCKETSSSLTQSCREGKFKCS-DGTC 76
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMD 315
IP W CD E+DC D +DED +K C +G + + C+ W CD + D
Sbjct: 77 IPMAWHCDAEIDCH-----DGSDEDGEKCRYTTLCTSGYM--CKNFNCVSKTWRCDGKDD 129
Query: 316 CSTDDIVDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C D +DE + L + C +C+ + CD DC + DEG
Sbjct: 130 CG-----DGSDETHCDIQLVEPEKCLIENRKFLCHDHKKCIDVRNVCDYNNDCLDASDEG 184
Query: 374 PFCNNKAD----CENLKCS--HKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQ 427
CNNK D C ++ CS +C P G MC CP G + +C D +EC G CDQ
Sbjct: 185 GLCNNKTDFKSECNSMNCSAAFECLRKPHGIMCVCPKGMHYLNNKCSDINECEQYGICDQ 244
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C N SY CSC Y L + K P+ +++SS I+ +L
Sbjct: 245 VCLNLEGSYTCSCDPHYELVDNHKCKIKGLNPE-----LLYSSLRQIKVFNL 291
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-----FCNAECTPGQFSC-GMGKCI 218
C +E RC + +C++ CD DC G+DE + C QF C KC+
Sbjct: 900 CKSDEYRC-YTGECISSHSRCDFIKDCPRGDDEDVVKCLHYTPNSCPQSQFLCHDKTKCL 958
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ CD DC DGSDE + C+H+ + QC S +CI +LCD DC
Sbjct: 959 DKKHMCDSIKDC-SDGSDEMD-CLHKHTCDSTTEYQCT-SGECIQRIFLCDGNPDC---- 1011
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
++ DE C N S CIP W CD E+DC D +DE ++S
Sbjct: 1012 -INGQDELNCLNQSCNNITEFRCNSGNCIPATWECDGEVDC-----FDGSDE----HYSC 1061
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C ++ C ++ +C++ C+GK DC + DE +N A
Sbjct: 1062 ATKKCKDDQFSC-TNGRCISHKFTCNGKDDCGDSSDENGCSSNHA 1105
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH----QCFNGQVQCALSKKC 258
EC ++ C G+CI +CD DC ++ C+H C Q C KC
Sbjct: 898 GECKSDEYRCYTGECISSHSRCDFIKDCPRGDDEDVVKCLHYTPNSCPQSQFLCHDKTKC 957
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDC 316
+ +CD DCS D +DE D H C + QC S +CI +LCD DC
Sbjct: 958 LDKKHMCDSIKDCS-----DGSDEMDCLHKHTCDSTTEYQCT-SGECIQRIFLCDGNPDC 1011
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
++ DE N + E RC S N C+ + CDG+ DC +G DE C
Sbjct: 1012 -----INGQDE----LNCLNQSCNNITEFRCNSGN-CIPATWECDGEVDCFDGSDEHYSC 1061
Query: 377 NNKA------DCENLKC-SHK 390
K C N +C SHK
Sbjct: 1062 ATKKCKDDQFSCTNGRCISHK 1082
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++GM G P VT+NI WP+ + +DY +YW D+ + +ES+ +D + V+
Sbjct: 415 IGRSGMDGSRPQPFVTQNIHWPNGVHVDYVGKRIYWVDAKMQFIESINLDATDRRVI 471
>gi|403259042|ref|XP_003922046.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Saimiri boliviensis boliviensis]
Length = 4632
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 169/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAECTP-GQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A P QFSCG G+CIP +W
Sbjct: 919 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCPVDQFSCGNGRCIPRAW 977
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C H
Sbjct: 978 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCGH 1037
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C++ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1038 SCYDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCHPD 1096
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
CIP W CD E DC D
Sbjct: 1097 GNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1156
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1157 DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCD-ECS 1210
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1211 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1270
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1271 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1309
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 160/400 (40%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2677 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 2736
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2737 QKDC-EDGLDEYH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2791
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2792 V-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 2850
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E RC + CDG DC + DE
Sbjct: 2851 IPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFRCADGRCLLNTQWQCDGDFDCPDHSDE 2910
Query: 373 GPF-----------------------------CNNKADCENLK----------------- 386
P CNNK DC +
Sbjct: 2911 APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVSG 2970
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+G
Sbjct: 2971 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDG 3029
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y ++P+ SC +++ DE +I + +IR+I +GS
Sbjct: 3030 YEIQPNNPNSCKSLS---DEEPFLILADHHEIRKISTDGS 3066
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 108 IKCPLNHIACLGTNKCVHLSQLCNGVFDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 167
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTCTNTH SY CSC EGY ++PD +SC
Sbjct: 168 STRCYCEDGFEIKEDGRSCKDQDECAVYGTCSQTCTNTHGSYTCSCVEGYLMQPDNRSCK 227
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ S+ I +LNGS
Sbjct: 228 AKIEPADRPPILLISNFETIEVFYLNGS 255
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 147/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 3565 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3621
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G C+ S KC+G DC DGSDE + C+ +C Q +C +CI
Sbjct: 3622 PASPTCSSSEYICASGGCMSASLKCNGEYDC-ADGSDEMD-CVTECNEDQFRCKNKARCI 3679
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3680 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3729
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3730 DDCGDNSDEAPDMCVKFLCPPTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCSGKLT 3789
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3790 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTDYTCEDNVNPCGDD 3848
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N +C D +ECL+ G+C C N SY
Sbjct: 3849 AYCNQIKTS---------VFCRCKPGFQRNMKNRKCEDLNECLVFGTCSHQCINVEGSYK 3899
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3900 CVCDQNFQER 3909
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3350 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3408
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3409 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3462
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3463 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3512
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3513 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3540
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3556 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 3613
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S C+ + C+ E DC+ D +DE D +C
Sbjct: 3614 GEDEKSCEPASPTCSSSEYICA-SGGCMSASLKCNGEYDCA-----DGSDE-MDCVTECN 3666
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C +CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3667 EDQFRCKNKARCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3717
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3718 LCKLHFWVCDGEDDCGDNSDEAP 3740
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3390 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3448
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3449 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3502
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3503 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3551
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3552 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3579
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 111/258 (43%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ L K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2596 RCIPLGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2654
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2655 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2712
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC ++ D+Y H C N+ C
Sbjct: 2713 HKCEENYFGCP-SGRCILNTWICDGQKDC---------EDGLDEY--HCDSSCSWNQFAC 2760
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2761 -SAQKCISKHWICDGEDDCGDGLDESDSICGAVTCAADMFSCQGSHACVPRHWLCDGERD 2819
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2820 CPNGSDELSTAGCAPNNT 2837
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3428 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3487
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3488 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3540
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3541 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3588
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3589 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 3617
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 126/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 916 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCPVDQFSCG-NGRCIP 974
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 975 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1034
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C++ Q +C+ S +CIP +W CD + DC D D + K + C+ NE
Sbjct: 1035 CGHSCYDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEF 1091
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 1092 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1151
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1152 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSL 1211
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1212 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1249
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 135/366 (36%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3156 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIENKISRPMALTID 3215
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3216 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3267
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDG- 234
++G D N+ P+ +K ++ L G
Sbjct: 3268 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVFKHLCMINNGGCSHLCLLAPGK 3327
Query: 235 ------------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
+ + TC+ C Q +C + KCIP W CD DC
Sbjct: 3328 THTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3386
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3387 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3446
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3447 LRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3496
Query: 368 NGEDEG 373
+ DE
Sbjct: 3497 DASDEA 3502
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT N+ WP+ L +D++ + LY
Sbjct: 684 VVDPVNGWMYWTDWEEDEIDGSVGRIEKAWMDGFNRQIFVTSNMLWPNGLTLDFHTNTLY 743
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 744 WCDAYYDHIEKVFLNGTHRKIVYSGREL 771
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 97/230 (42%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+C+ CDG C + ++ C ++ + +++CIP LCD E
Sbjct: 2548 EFECGNGECVDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPLGKLCDGE 2607
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2608 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2661
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
+F V +RC S++ CV + CDG DC + DE LKC
Sbjct: 2662 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE------------LKCP 2708
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2709 VQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEYHCDSSCS 2754
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4085 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4144
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4145 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4179
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2054 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2113
Query: 166 HPN 168
N
Sbjct: 2114 GSN 2116
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 116/314 (36%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2377 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2436
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2437 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2496
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C +G V+C G E N C+ + + +C + +
Sbjct: 2497 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECG-NGE 2555
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
C+ + CD C D +DE + + C G C +++CIP LCD E D
Sbjct: 2556 CVDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPLGKLCDGEND 2609
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2610 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2655
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2656 ----KNCNNTDCTH 2665
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 383 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRYTIIQ 442
Query: 167 PNELR 171
++R
Sbjct: 443 GRQVR 447
>gi|449504278|ref|XP_002198795.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Taeniopygia guttata]
Length = 1801
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 155/327 (47%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC S C+A FCDG DC +G DE A C+ +F C G+CI +
Sbjct: 146 CSEKEFRC-SDGSCIAEHWFCDGDTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILD 204
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C +G+ C S CI W CD + DC D
Sbjct: 205 IYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCN-SGLCINAGWRCDGDFDCD-----DQ 257
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 258 SDERNCTTSMCTADQFRCK-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENTGTPQ 309
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCSHKCS 392
C P++ CG+ +C+ K C+G DC +G DE P N + + N C+ KC
Sbjct: 310 CAPDQFLCGNG-RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQ 368
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D +EC +G C Q CTN+ + C C +GY LRPD
Sbjct: 369 MVRGMVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDK 428
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 429 RSCKALG---PEPV-LLFANRIDIRQV 451
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 25 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 84
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 85 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFSCQ-NGYCIRSLWHCDGDNDCG-----DNS 137
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + +C+ CI +W CD + DC D +DE+
Sbjct: 138 DEQCD-MRKCSEKEFRCS-DGSCIAEHWFCDGDTDCK-----DGSDEE 178
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DG+H VL
Sbjct: 881 KIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGNHRKVLIG 940
Query: 167 PN 168
N
Sbjct: 941 SN 942
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G R L++ N+ WP+ L +D L W D+H +E+ ++G+H L
Sbjct: 1116 KLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGAHRRTLLS 1175
Query: 167 P 167
P
Sbjct: 1176 P 1176
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 488 DRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 547
Query: 166 HPN 168
N
Sbjct: 548 WQN 550
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 576 RIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAV 633
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E R+DGS VL
Sbjct: 1334 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEVARLDGSSRKVL 1390
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G N+ +V +++ P+ L ID+ + LYW D+ + +E DG+ VL
Sbjct: 795 ISRAKWDGSNQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVSNTDGTMRTVLIWE 854
Query: 168 N 168
N
Sbjct: 855 N 855
>gi|281346317|gb|EFB21901.1| hypothetical protein PANDA_004060 [Ailuropoda melanoleuca]
Length = 1389
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQC 252
C C QF C G+CIP W CDG DC D SDE T C Q C + QC
Sbjct: 120 CVHSCLDNQFRCSSGRCIPGHWACDGDNDC-GDFSDEAQTNCTRQEIHSPAGCNGDEFQC 178
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWL 309
CIP W CD E DC D +DE C + C + +CI W+
Sbjct: 179 HPDGNCIPDLWRCDGEKDCE-----DGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWI 233
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSN 368
CD ++DC D +DED ++ LC P + C + ++ C+ K C+G+ DC +
Sbjct: 234 CDGDIDCE-----DQSDED-----DCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPD 283
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSC 425
G DEG C ++ N CS+ CS P RG +C CP G NK C D C C
Sbjct: 284 GSDEGDLC-DECSLNNGGCSNHCSVVPGRGIVCSCPQGLQLNKDNKTCEIIDYCSNHLKC 342
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 343 SQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 394
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 125/338 (36%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC C Q C + +CIP
Sbjct: 1 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCQMDQFSCG-NGRCIP 59
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 60 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 119
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + Q +C+ S +CIP +W CD + DC D D + + H+ C+ +E
Sbjct: 120 CVHSCLDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQTNCTRQEIHSPAGCNGDEF 176
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE----GPF----------------CNNKA----- 380
+C C+ CDG+ DC +G DE G C NKA
Sbjct: 177 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWICDG 236
Query: 381 -----------DCENLKCSHKCSP-TPRGAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P + C P + C D DEC L
Sbjct: 237 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPDGSDEGDLCDECSL 296
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC +G L D K+C ++
Sbjct: 297 NNGGCSNHCSVVPGRGIVCSCPQGLQLNKDNKTCEIID 334
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ +E +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 166 HSPAGCNGDEFQCHPDGNCIPDLWRCDGEKDCEDGSDE-KGCNGTLRLCDHKTKFSCRST 224
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 225 GRCINKAWICDGDIDC-EDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDC 281
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY + LYWCD+ + +E + ++ G+ VL
Sbjct: 1143 IGKARLDGSEKVILVSMGIAWPNGISIDYEEHKLYWCDARTDKIERIDLETGGNREMVLS 1202
Query: 166 HPN 168
N
Sbjct: 1203 GSN 1205
>gi|363734400|ref|XP_421114.3| PREDICTED: low-density lipoprotein receptor-related protein 4
[Gallus gallus]
Length = 1944
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 155/327 (47%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC S C+A FCDG DC +G DE A C+ +F C G+CI +
Sbjct: 192 CSEKEFRC-SDGSCIAEHWFCDGDTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILD 250
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C +G+ C S CI W CD + DC D
Sbjct: 251 IYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCN-SGLCINAGWRCDGDSDCD-----DQ 303
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 304 SDERNCTTSMCTADQFRCK-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENTGTPQ 355
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCSHKCS 392
C P++ CG+ +C+ K C+G DC +G DE P N + + N C+ KC
Sbjct: 356 CAPDQFLCGNG-RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNVNNGGCAQKCQ 414
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D +EC +G C Q CTN+ + C C +GY LRPD
Sbjct: 415 MVRGMVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDK 474
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 475 RSCKALG---PEPV-LLFANRIDIRQV 497
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 71 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 130
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 131 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFSCQ-NGYCIRSLWHCDGDNDCG-----DNS 183
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + +C+ CI +W CD + DC D +DE+
Sbjct: 184 DEQCD-MRKCSEKEFRCS-DGSCIAEHWFCDGDTDCK-----DGSDEE 224
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS+ VL
Sbjct: 927 KIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGSNRKVLIG 986
Query: 167 PN 168
N
Sbjct: 987 SN 988
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLN-SWDLP-APEIFPLD---- 105
L T LA+++ RN + V RL + L+N S D P A +FP
Sbjct: 1471 LKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVLINNSLDEPRAIAVFPKKGYLF 1530
Query: 106 -------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES ++G
Sbjct: 1531 WTDWGHIAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNG 1590
Query: 159 SHNAVLC----HPNEL 170
VL HP L
Sbjct: 1591 KLRQVLVSQVSHPFAL 1606
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G R L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1235 KLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGANRRTLLS 1294
Query: 167 P 167
P
Sbjct: 1295 P 1295
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 534 DRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 593
Query: 166 HPN 168
N
Sbjct: 594 WQN 596
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 622 RIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAV 679
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++ ++G N ++ + ++ L +D+ LYW D+ NTVE R+DGS VL
Sbjct: 1453 IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVL 1509
>gi|426221145|ref|XP_004004771.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Ovis
aries]
Length = 4630
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 170/403 (42%), Gaps = 101/403 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C+A C QFSCG G+CIP +W
Sbjct: 920 CPDDQFKC-KNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCQVDQFSCGNGRCIPRAW 978
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 979 LCDREDDCGDHTDEIASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1038
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
CF+ Q C+ S +CIP +W CD + DC D ++ T E+ C + QC
Sbjct: 1039 SCFDNQFSCS-SGRCIPGHWACDGDNDCGDFSDEINCTREEIHSPAGCNANEFQCHPDGN 1097
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCD 361
CIP W CD E DC D +DE K + LC H + C S+ +C++ + CD
Sbjct: 1098 CIPDVWHCDGEKDCE-----DGSDE---KGCNGTLRLCDHKTKFSCRSTGRCISKAWVCD 1149
Query: 362 GKPDCSNGEDE--------GP-----------------FCNNKADC-------------- 382
G DC + DE GP CN + DC
Sbjct: 1150 GDIDCEDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRRDCPDGSDEGDLCDECS 1209
Query: 383 -ENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CS+ CS P RG +C CP G NKT C D C C Q C +
Sbjct: 1210 LNNGGCSNHCSVVPGRGIVCSCPEGLQLGRDNKT-CEIVDYCSNHLKCSQVCEQHKQTVK 1268
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1269 CSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1308
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 122/401 (30%), Positives = 172/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2675 VRCNSTSLCVLPAWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2734
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC +D +D +D
Sbjct: 2735 QKDC-EDGLDEFH-CDSSCSWNQFACS-TEKCISKHWICDGEDDC--EDGLDESDSICGT 2789
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S+ C+P +WLCD E DC ST N D + + HN V
Sbjct: 2790 I-TCAADMFSCQGSRACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCDENAFMCHNKV- 2847
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ +++ CDG DC++ D
Sbjct: 2848 CIPKQFVCDHDDDCGDGSDESLQCGYRQCNAEEFSCADGRCLLNTQWQCDGDFDCTDHSD 2907
Query: 372 EGP-----------------------------FCNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2908 EAPINPKCKSAEQSCNSSFFMCKNGRCIPSGALCDNKDDCGDGSDERNCHINECLSKKVS 2967
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 2968 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 3026
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 3027 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3064
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 86/148 (58%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C +N+C+ LS+ C+G DC +G DEG C +C+ L C HKC+
Sbjct: 109 IKCPWNHIACLGANKCIHLSQLCNGILDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRN 168
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
+C+C G + C D DEC I G+C Q+C NT+ SY CSC EGY ++PD +SC
Sbjct: 169 STVCYCEDGFEIKEDGRSCKDQDECAIYGTCSQSCINTYGSYACSCVEGYIMQPDNRSCK 228
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A N P D+P ++ +++ I +LNGS
Sbjct: 229 AKNEPTDKPPLLLIANSETIEIFYLNGS 256
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 144/376 (38%), Gaps = 101/376 (26%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 3563 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCILAKWKCDGHEDCKYGEDEKNCE 3619
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3620 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKAHCI 3677
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3678 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3727
Query: 314 MDCSTDDIVDNTDEDWDK------------------------------------------ 331
DC DN+DE D
Sbjct: 3728 DDCG-----DNSDEAPDMCDKFLCPPTRPHRCRNNRVCLQPERMCDGIDDCGDDSDEDPC 3782
Query: 332 --YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------G 373
++ A C +E C S+ +C+ + CD DC +G DE
Sbjct: 3783 GGKLTYKARPCKKDEFAC-SNKKCIPMDLQCDQLDDCGDGSDEQGCRITPSEYTCEDNVN 3841
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTN 431
P C + A C +K S C C G +N QC D +ECL+ G+C C N
Sbjct: 3842 P-CGDDAYCNQIKTS---------VFCRCKPGFQRNAKNRQCEDLNECLVFGTCSHQCIN 3891
Query: 432 THLSYVCSCTEGYTLR 447
SY C C + + R
Sbjct: 3892 IEGSYKCVCHQNFQER 3907
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3348 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3406
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3407 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3460
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3461 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3510
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3511 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3538
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCDG DC +
Sbjct: 3554 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCILAKWKCDGHEDC-KY 3611
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3612 GEDEKNCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3664
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3665 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3715
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3716 LCKLHFWVCDGEDDCGDNSDEAP 3738
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3388 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3446
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3447 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3500
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3501 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3549
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3550 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3577
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3426 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3485
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3486 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3538
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3539 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3586
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3587 DQFQC-SNGQCILAKWKCDGHEDCKYGEDE 3615
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 129/346 (37%), Gaps = 90/346 (26%)
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
ED N C QF C +CIP+ W CDG DC + + TC C Q C
Sbjct: 910 EDSVSCYNHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCQVDQFSCG 969
Query: 254 LSKKCIPHNWLCDEEMDCS--TDDIVD---NTDEDWDKF--------------------- 287
+ +CIP WLCD E DC TD+I T E +F
Sbjct: 970 -NGRCIPRAWLCDREDDCGDHTDEIASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCG 1028
Query: 288 ---------HQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNA 337
H CF+ Q C+ S +CIP +W CD + DC D ++ T E+ H+
Sbjct: 1029 DGSDEVGCVHSCFDNQFSCS-SGRCIPGHWACDGDNDCGDFSDEINCTREE-----IHSP 1082
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNNKA----------- 380
C+ NE +C C+ CDG+ DC +G DE C++K
Sbjct: 1083 AGCNANEFQCHPDGNCIPDVWHCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCI 1142
Query: 381 -------------------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA---- 416
DC+N C P ++C P + C D
Sbjct: 1143 SKAWVCDGDIDCEDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRRDCPDGSDEG 1202
Query: 417 ---DEC-LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
DEC L +G C C+ VCSC EG L D K+C V+
Sbjct: 1203 DLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLGRDNKTCEIVD 1248
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3467 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3526
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3527 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3578
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CI W CD DC + N + + C +E
Sbjct: 3579 NCETSCSKDQFQCS-NGQCILAKWKCDGHEDCKYGEDEKNCEP--------ASPTCSSSE 3629
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3630 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCRNKAHCIPIRWLC 3683
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV SK CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2594 RCVPHSKLCDGENDCGDNSDELDCKVSTCASVEFRCTDGTCIPRSARCNQNIDC-ADASD 2652
Query: 237 EPN------TCIHQC---FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N T ++ G V+C + C+ W+CD DC D D
Sbjct: 2653 EKNCNNTDCTYFYKLGVKTTGFVRCNSTSLCVLPAWICDGSNDCG--DYSDELKCPVQNK 2710
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2711 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2758
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + S C P
Sbjct: 2759 -STEKCISKHWICDGEDDCEDGLDESDSICGTITCAADMFSCQGSRACVPRHWLCDGERD 2817
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2818 CPDGSDELSTAGCAPNNT 2835
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/211 (32%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ +C+ CDG P C + DE +C N C G C +C+P S CD
Sbjct: 2545 SEFECGNG-ECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCVPHSKLCD 2603
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + + +C CIP + C++ +DC S + +NTD
Sbjct: 2604 GENDC-GDNSDELDCKVSTCASVEFRCT-DGTCIPRSARCNQNIDCADASDEKNCNNTDC 2661
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G V+C + C+ W+CD DC D +DE K N C
Sbjct: 2662 TYFYKLGVKTTGFVRCNSTSLCVLPAWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 2714
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 2715 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE 2744
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 99/230 (43%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++C+PH+ LCD E
Sbjct: 2546 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCVPHSKLCDGE 2605
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + + +C CIP + C++ +DC+ N +
Sbjct: 2606 NDCG-----DNSDELDCKVSTCASVEFRCT-DGTCIPRSARCNQNIDCADASDEKNCNNT 2659
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
YF V +RC S++ CV + CDG DC + DE LKC
Sbjct: 2660 DCTYFYKLGVKT-TGFVRCNSTSLCVLPAWICDGSNDCGDYSDE------------LKCP 2706
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2707 VQNKHKCEENYFG----CPSGRCILNTWVCDGQKDCEDGLDEFHCDSSCS 2752
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 131/366 (35%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3154 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3213
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3214 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3265
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDGS 235
++G D N+ P+ K ++ L G
Sbjct: 3266 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGR 3325
Query: 236 DEPNTC-------------IHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
C + C Q +C + KCIP W CD DC
Sbjct: 3326 SHTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3384
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3385 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3444
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3445 LRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3494
Query: 368 NGEDEG 373
+ DE
Sbjct: 3495 DASDEA 3500
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+EKA M G NR VT + WP+ L +D++ LYWCD++ + +E V ++G+H ++
Sbjct: 709 RIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIEKVFLNGTHRKIVYS 768
Query: 167 PNEL 170
EL
Sbjct: 769 GKEL 772
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + V
Sbjct: 4083 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVVSVTS 4142
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4143 KQGLLHPHRIDVFEDYIYGAGPKNGVFRVQKFGHG 4177
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1080 HSPAGCNANEFQCHPDGNCIPDVWHCDGEKDCEDGSDEKG-CNGTLRLCDHKTKFSCRST 1138
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 1139 GRCISKAWVCDGDIDC-EDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRRDC 1195
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + ID+ ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2053 IGKARLDGSEKVVLVSMGIAWPNGISIDFEENKLYWCDARTDKIERIDLETGGNREMVLS 2112
Query: 166 HPN 168
N
Sbjct: 2113 GSN 2115
>gi|432957958|ref|XP_004085946.1| PREDICTED: low-density lipoprotein receptor-like, partial [Oryzias
latipes]
Length = 443
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 159/335 (47%), Gaps = 37/335 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C ++ RC + QCV+ S CD DC +G DE C+ F C CIP
Sbjct: 32 AKQCLASDFRC-ENGQCVSASFVCDEDEDCDDGSDEASCPPITCSSASFQCNNSICIPRQ 90
Query: 222 WKCDGFVDCLEDGSDEPNTC---------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
W CDG+ DCL+D + P +C HQC + + C S +CI +W CD + DC
Sbjct: 91 WACDGYNDCLDDSDEWPQSCHAEAPVTLASHQCHSMEFHCG-SGECIHGSWKCDGDADC- 148
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+D +DE C + +C CI + C+++ DC D TDE
Sbjct: 149 ----LDGSDETGCTRSTCRPDEFECG-DGTCIHGSRQCNQQYDCR-----DTTDES---- 194
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCS 388
N C P++ +C S +C+ + + CD K DC + DE P +N+ N CS
Sbjct: 195 GCVNVTRCEGPDKFKC-RSGECITMERVCDSKRDCRDWSDE-PLRECGSNECLYNNGGCS 252
Query: 389 HKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
H C+ G C CP G + +K +C D DEC +C QTC NT SY C C EGY +
Sbjct: 253 HICNDLKIGHECLCPTGYSLRDKRRCEDIDECASPDTCSQTCINTMGSYKCECEEGYQVD 312
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
P K+C ++ A + F++ ++R++ L+ S
Sbjct: 313 PVTKACKSIGT----IAYLFFTNRHEVRKMTLDKS 343
>gi|297262740|ref|XP_001099776.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Macaca mulatta]
Length = 1682
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 162/338 (47%), Gaps = 28/338 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 267 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 325
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 326 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 383
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 328
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 384 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDEAP 433
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-C 387
+ + + C+ + SS +CVA C+G+ DC +G DE N+ L C
Sbjct: 434 KNPHCTSPEHKCNASSQFLCSSGRCVAEVLLCNGQDDCGDGSDERGCHINECLSHKLSGC 493
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
S C G C C G + C D DEC C Q C NTH SY C C EGY
Sbjct: 494 SQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYA 553
Query: 446 LR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +R+++L+GS
Sbjct: 554 PRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 588
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 115 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 173
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 174 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 231
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 232 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 279
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 280 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 314
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 1163 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 1219
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 711 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 767
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 77/189 (40%), Gaps = 47/189 (24%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D I+ D R +E A + G NR +++++I P + +D +YW D
Sbjct: 736 TLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFEDYVYWTDWETK 793
Query: 150 TVESV-RVDGSHNAVL-----------------------CHPNE-LRCGSSNQCVALSKF 184
++ + G++ +L C PN RC + C+ + +
Sbjct: 794 SINRAHKTTGTNKTLLISTLHRPMDLHVFHALRQPDXXVCPPNRPFRCKNDRVCLWIGRQ 853
Query: 185 CDGKPDCSNGEDEGPFCNAECTP-----------GQFSCGMGKCIPESWKCDGFVDCLED 233
CDG +C +G DE +C P +F C +C+ S +C+ F DC D
Sbjct: 854 CDGMDNCGDGTDE-----EDCEPPTAQTTHCKDKKEFLCRNQRCLSSSLRCNMFDDC-GD 907
Query: 234 GSDEPNTCI 242
GSDE + I
Sbjct: 908 GSDEEDCSI 916
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 70 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCN- 127
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 128 ----GADDCGDGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 182
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 183 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 226
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 19/133 (14%)
Query: 352 QCVALSKFCDGKPDCSNGEDE---------GPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
+C++ S C+ DC +G DE N + C + +C T + A C C
Sbjct: 891 RCLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGD---EARCVRTEKAAYCAC 947
Query: 403 PAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTA 455
+G + P + C D +ECL G+C Q C NT ++CSC + T + +G
Sbjct: 948 RSGFHTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQV 1007
Query: 456 VNVPQDEPASIIF 468
+ + D +F
Sbjct: 1008 LYIADDNEIRSLF 1020
>gi|198416045|ref|XP_002124313.1| PREDICTED: similar to low density lipoprotein receptor-related
protein 2, partial [Ciona intestinalis]
Length = 2085
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/311 (34%), Positives = 149/311 (47%), Gaps = 28/311 (9%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-QFSCGMGK-CIP 219
A C+ N+ C SS+ C++ C+G DC +G DE C P F+C GK C+
Sbjct: 1137 AQTCNTNQFTC-SSHLCISRYLVCNGFDDCPDGLDEQDCEPRVCNPSYSFACVDGKQCVG 1195
Query: 220 ESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
S++CDG DC DGSDE P+ C + QC S C+P +W CD +DC
Sbjct: 1196 NSYRCDGHPDC-RDGSDEVGCPSKPPGLCETNEFQCQTSGMCVPQSWFCDARVDCD---- 1250
Query: 277 VDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYF 333
D +DE C + Q QC ++ CI ++ C+ +C DN+DE+
Sbjct: 1251 -DGSDEPPTCPETTCRSYQFQCK-NRVCIYMSYKCNGHNECG-----DNSDEEDCPTPPP 1303
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+ C + C + +C++ K CDGK DCS G DE FC C + C+ KC+
Sbjct: 1304 TLPPPPCGTMDFECPGTKKCISYDKVCDGKADCSFGTDEDHFCVTDL-CSSFGCTDKCTN 1362
Query: 394 TPRGAMCFCPAGQ----NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P G +C+C N +KT C D DEC C Q C NT S+ C C +GY L D
Sbjct: 1363 LPTGPVCWCDGAGYELLNDSKT-CADIDECARH-YCSQACDNTEGSFYCKCDDGYLLDSD 1420
Query: 450 GKSCTAVNVPQ 460
G +C + P+
Sbjct: 1421 GTTCKVTSEPR 1431
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 132/317 (41%), Gaps = 57/317 (17%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ +C S CV L CDG PDCS+G DE + C P F+C CI S KCD
Sbjct: 68 QFKC-SDGSCVPLEFKCDGDPDCSDGGDEQACPDTTCPPSDFTCDNNYCIDLSLKCDHVN 126
Query: 229 DCLE------------------------------------DGSDEPNTCIHQCFNGQVQC 252
DC + D SDE N C C G+ C
Sbjct: 127 DCPDNSDENGCTYTPCTDMTCKNGACFTTAQLCDGNMDCRDQSDEFN-CTSTCDAGEFMC 185
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +CIP + CD +C D +DE D + G + C+ W+CD
Sbjct: 186 D-NGRCIPQVFYCDVWDNCG-----DGSDEPDDCVYPSCPGNTFTCDNSVCVNQEWVCD- 238
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
TD+ D +DE Y V C N+ RC +S++C+ + + CDG DC GEDE
Sbjct: 239 ----GTDNCGDGSDEANCDYL----VGCLNNQWRCSNSSRCINVVQICDGNNDCEGGEDE 290
Query: 373 GPFCN--NKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGSCDQT 428
+ C L C C TP G MC+C G + C D DEC + G C+QT
Sbjct: 291 ATTTKTCSSTRCGILSCDGFCRATPNGGMCYCSDGYQVADDGISCEDFDECSVFGMCEQT 350
Query: 429 CTNTHLSYVCSCTEGYT 445
C NT SY C C GY
Sbjct: 351 CENTVGSYKCGCGLGYV 367
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 109/262 (41%), Gaps = 57/262 (21%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+ S C+G DC + DE C C Q C GKCIP SWKCDG DC ++
Sbjct: 1032 RCIYQSYKCNGVNDCGDNSDEDDQICGGTCRSYQSQCDNGKCIPTSWKCDGDDDCGDNSD 1091
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD---------NTDEDWDK 286
+ + C QC + KCIP NW+CD DC +D D NT++
Sbjct: 1092 EAGCPSVRPCSIYNFQCD-NGKCIPLNWVCDTNNDC--EDASDEKDCAAQTCNTNQFTCS 1148
Query: 287 FHQCF------NG----------------------QVQCALSKKCIPHNWLCDEEMDCST 318
H C NG C K+C+ +++ CD DC
Sbjct: 1149 SHLCISRYLVCNGFDDCPDGLDEQDCEPRVCNPSYSFACVDGKQCVGNSYRCDGHPDCR- 1207
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-- 376
D +DE S LC NE +C +S CV S FCD + DC +G DE P C
Sbjct: 1208 ----DGSDEVGCP--SKPPGLCETNEFQCQTSGMCVPQSWFCDARVDCDDGSDEPPTCPE 1261
Query: 377 ----NNKADCENLKC---SHKC 391
+ + C+N C S+KC
Sbjct: 1262 TTCRSYQFQCKNRVCIYMSYKC 1283
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 76/174 (43%), Gaps = 24/174 (13%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLED---GSDEPNTCIHQCFNG-QVQCALSKKC 258
AEC+ G+F C G CIP SW CDG DCL + GSDE + C + Q +C+ C
Sbjct: 18 AECSTGEFECMNGACIPTSWVCDGTTDCLGESVPGSDEKDCPSASCSSSTQFKCS-DGSC 76
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+P + CD + DCS D DE C C + CI + CD DC
Sbjct: 77 VPLEFKCDGDPDCS-----DGGDEQACPDTTCPPSDFTCD-NNYCIDLSLKCDHVNDCP- 129
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE+ Y + C + C ++ CDG DC + DE
Sbjct: 130 ----DNSDENGCTYTPCTDMTCK--------NGACFTTAQLCDGNMDCRDQSDE 171
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+ M G +R+PLV + + P + ID+ + +YW DS + +ES+ + G + L
Sbjct: 841 KIEKSWMDGTHRTPLVNQTLWIPIGVTIDHKTNYVYWMDSGFDRIESMSLFGYNRRQL 898
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D L KA +G + + ++ +D+ LYWCD L TVE R+DG+H A+L
Sbjct: 1479 DGILYKAYRNGTQKEIVFRSGQALTENVAVDWVGRNLYWCDYSLGTVEVARIDGTHRAIL 1538
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 56/139 (40%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER------- 107
T +A+++ RN C V R+ +L++ ++ P LD R
Sbjct: 1503 TENVAVDWVGRNLYWCDYSLGTVEVARIDGTH-RAILHAENVTNPRGLALDPRDGYHFLF 1561
Query: 108 ---------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+ M G +R +V + WP+ L IDY +Y+ D+ L+ + DG
Sbjct: 1562 WTDWGQNPRIERCDMDGAHRKTIVDDRLFWPNGLTIDYPTKTIYFADAKLDFIHRCGYDG 1621
Query: 159 -------SHNAVLCHPNEL 170
+ N + HP+ L
Sbjct: 1622 QGRAEVLAGNLFIKHPHAL 1640
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ RL++A M G LV ++ +PS + +D+ +YW D+ + VE+V +G +
Sbjct: 519 YTATARLDRAYMDGSELYTLVDTSVGYPSGITLDFENTRVYWVDTKFDCVETVDYNGKNR 578
Query: 162 AVLCHPNEL 170
+ + L
Sbjct: 579 RTILSGSHL 587
>gi|348511569|ref|XP_003443316.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Oreochromis niloticus]
Length = 4552
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 101/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C G+ C C+P +WLCD E DC D +DE + C N ++C
Sbjct: 20 CDVGEFHCHNHDTCVPEDWLCDGEPDCP-----DESDETDHVCAQEVVIRCPLNHIQCTG 74
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAG--Q 406
+ +C+ +K C+G DC +G DEG C + C L+C + C T G CFC G
Sbjct: 75 TKKCIHFNKLCNGARDCEDGYDEGVHCRELLSACHELRCRYGCVMTRNGTFCFCADGFEV 134
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ T C D DEC + G+C QTCTNT+ SY CSCTEGY L+P+ SC A P D ++
Sbjct: 135 GEDGTSCRDHDECAMYGACSQTCTNTYGSYRCSCTEGYILQPNRISCKAKQDPGDSRPAL 194
Query: 467 IFSSTVDIRRIHLNGS 482
+ + I HLNGS
Sbjct: 195 LIGGSDRIVVTHLNGS 210
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/294 (34%), Positives = 139/294 (47%), Gaps = 32/294 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---------IHQCFNGQVQ 251
C C F C G+CIP+ W CDG DC D SDE TC + +C +
Sbjct: 958 CIQSCANTHFQCSNGRCIPDHWACDGDNDC-GDLSDETLTCRGGPALLPPVIECSAEEFH 1016
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C CIP W CD + DC +D D + + K + C S KCI +W+CD
Sbjct: 1017 CVTDGTCIPERWSCDGDKDC--EDGSDEKECEGTKRMCDPKAKFTCKDSGKCITKSWVCD 1074
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGE 370
++DC D +DE+ S + +C P + C + S+ C+ K C+GK DC++
Sbjct: 1075 GDIDCE-----DRSDEE-----SCESAVCKPPKYPCANDSSVCLTPDKICNGKVDCADRS 1124
Query: 371 DEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCD 426
DEGP C + CSH+C+ P +G +C CP G + NKT C D C C
Sbjct: 1125 DEGPIC-DLCLVARGGCSHQCTVAPGKGVVCSCPPGLHLDSSNKT-CEVVDYCSRHLKCS 1182
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC G+ L DG SC + + + A +IFS +IRRI L+
Sbjct: 1183 QVCEQYKTTVKCSCYPGWMLDSDGDSCHSTDPFE---AFVIFSIRHEIRRIDLH 1233
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 110/336 (32%), Positives = 159/336 (47%), Gaps = 40/336 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN-AECTPGQFSC-GMGKCIPES 221
C N+ C S N+C+A CDG+ DC +G DE C C PG FSC G C+P+
Sbjct: 2677 CLWNQFAC-SKNKCIAKQWLCDGENDCEDGLDESVQICGTVTCAPGLFSCPGSYACVPKR 2735
Query: 222 WKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
W CDG DC DGSDE PN + C + +C +K CIP ++CD + DC
Sbjct: 2736 WLCDGERDC-PDGSDELSAAGCAPN---NTCDDSSFRCR-NKACIPQRFVCDHDNDCG-- 2788
Query: 275 DIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKY 332
D +DE + + C + + +C + + W CD DC D++DE +
Sbjct: 2789 ---DGSDESVECVYRSCGSEEFRCGDGRCLLSSQWECDGYADCP-----DHSDELPLNLK 2840
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSH 389
LC+ + C S+ +C++ CDGK DC + DE N +C N + C+
Sbjct: 2841 CLAAGSLCNGSFFMC-SNGRCISQGNLCDGKDDCGDRSDERNC--NVNECLNRRVSGCTQ 2897
Query: 390 KCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-TL 446
C P G C C G + CVD DEC C Q C NT+ SY C C +GY L
Sbjct: 2898 DCQDLPVGYKCKCWPGFYLKDDGRTCVDVDECSTTLPCSQRCINTYGSYKCLCVDGYEAL 2957
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ +C A++ E +I + +IR++ ++GS
Sbjct: 2958 ERNPNTCKALSA---EEPFLIMADHHEIRKLSVDGS 2990
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 135/311 (43%), Gaps = 53/311 (17%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD--------SHLNT------ 150
D + A M G R + +IQ +L + +D +YW D +H T
Sbjct: 3150 DNHILFATMDGAQRRKVSYDHIQGVMALTL--FEDFVYWTDGKSKSLRRAHKTTGAQGIE 3207
Query: 151 -------VESVRVDGS--HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEG 198
++S++V S V H ++ G + LS + K C +
Sbjct: 3208 LLNSWQAIKSIKVYHSLRQPEVPKHQCQIANGGCSHLCLLSPGGEHKCACPTNFYLAADN 3267
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF CG +CIP WKCD DC DGSDEP C +C G+ QC
Sbjct: 3268 KTCLSNCTSSQFRCGTDECIPFWWKCDTVDDC-GDGSDEPADCPEFKCQPGRFQCGTGLC 3326
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DNTDE + + C +GQ +C +KCIP N C+ + DC
Sbjct: 3327 ALPP-FICDGENDCG-----DNTDEANCETYICLSGQFKCTGKQKCIPLNLRCNGQDDCG 3380
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D D TD C P++ +C +S C++ CD PDC++G DE
Sbjct: 3381 --DGEDETD--------CPESTCSPDQFQCKASMHCISKLWVCDEDPDCADGSDE----- 3425
Query: 378 NKADCENLKCS 388
ADC+ C
Sbjct: 3426 --ADCDEKTCG 3434
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CVA S+FCDG DC + DE N C + SC G C+P S C+ +DC D SD
Sbjct: 2520 RCVATSRFCDGIDDCGDNSDEASCSNVTCGSSESSCKDGTCVPSSAWCNQVIDC-ADASD 2578
Query: 237 EPN----TCIHQCFNGQ-----VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G + C + CI +W+CD DC D D T+ +
Sbjct: 2579 EKNCNHTNCSHFYKLGVKEKDFISCNSTSLCIHPSWICDGANDCG--DYADETNCQGEHR 2636
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C G C S CI WLCD + DC D DE F ++ C N+ C
Sbjct: 2637 HKCEEGHFACP-SGNCISSVWLCDGQKDCE-----DGADE-----FQCDSS-CLWNQFAC 2684
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S N+C+A CDG+ DC +G DE
Sbjct: 2685 -SKNKCIAKQWLCDGENDCEDGLDE 2708
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 3393 CSPDQFQCKASMHCISKLWVCDEDPDCADGSDEADCDEKTCGPHEFRCENNNCIPDHWRC 3452
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC ++ +E P TC H+ F CA + CI + CD + DC +DN+D
Sbjct: 3453 DSQNDCGDNSDEENCKPVTCNHKDF----ACA-NGDCISSRFRCDGDYDC-----LDNSD 3502
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + H C + Q +C + CI W+CD + DC + N E S N +C
Sbjct: 3503 EKGCEAH-CSDDQFRCH-NNLCISIKWMCDGQEDCKMGEDEKNCQETVVPSCSVNEYVC- 3559
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+S CV+ S CDG +C +G DE
Sbjct: 3560 -------TSGGCVSASLRCDGHDNCLDGSDE 3583
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 125/445 (28%), Positives = 183/445 (41%), Gaps = 75/445 (16%)
Query: 18 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNV 77
CIP +W CD + DC DN+DE+ + + NH++ + +
Sbjct: 3445 CIPDHWRCDSQNDCG-----DNSDEE------------NCKPVTCNHKDFA---CANGDC 3484
Query: 78 SSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYN 137
S R RC D L++ D E D++ H + +I+W + D
Sbjct: 3485 ISSRFRCDGDYDCLDNSDEKGCEAHCSDDQFR---CHNN-----LCISIKW----MCDGQ 3532
Query: 138 QDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+D D N E+V S N +C +S CV+ S CDG +C +G DE
Sbjct: 3533 EDCKMGEDEK-NCQETVVPSCSVNEYVC--------TSGGCVSASLRCDGHDNCLDGSDE 3583
Query: 198 GPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-- 254
C EC +F C CIP W+CD +DC+ D SDE N C F + +
Sbjct: 3584 -IGCVKECREDEFLCLNRAHCIPRRWRCDDVLDCM-DHSDEEN-CGQAAFFCRADEFICN 3640
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCD 311
+ C H W+CD + DC DN+DED D K +C C+ + +C+
Sbjct: 3641 NTLCKLHTWVCDGKDDCG-----DNSDEDVDMCAKLPCPPTRPFRCRNDHVCLRTDQVCN 3695
Query: 312 EEMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ DC DN+DE+ + H C E C S+ +C+ + CD DC +G
Sbjct: 3696 KVDDCG-----DNSDEEECGERKPHQPRPCGKTEFSC-SNRRCIPIQLQCDLFSDCGDGG 3749
Query: 371 DEGPFCNNKADCENLKCSHKCSP---------TPRGAMCFCPAG--QNPNKTQCVDADEC 419
+ C KA C K +P T ++C C G +N QC + +EC
Sbjct: 3750 SDEQDC--KAFSSGDVCGKKTNPCGEDAICNQTNANSICQCKPGFKRNQKTGQCEEMNEC 3807
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGY 444
L +C C NT SY CSC +
Sbjct: 3808 LQFDACPHYCVNTKGSYKCSCDRNF 3832
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 119/338 (35%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + +TC Q C Q C + +CIP
Sbjct: 840 NHTCPLNQFKCSNNRCIPKRWLCDGTNDCGNNEDESNSTCSAQPCQADQFSCQ-NGRCIP 898
Query: 261 HNWLCDEEMDCS--TDDI--VDNTDEDWDKF----------------------------- 287
H+W CD E DC +D+I V T E +F
Sbjct: 899 HSWSCDREDDCGDKSDEISCVFPTCEPVTQFSCSNGRCISVEWHCDSDDDCGDGSDEVGC 958
Query: 288 -HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNEL 345
C N QC+ + +CIP +W CD + DC D+ D T + C E
Sbjct: 959 IQSCANTHFQCS-NGRCIPDHWACDGDNDCG--DLSDETLTCRGGPALLPPVIECSAEEF 1015
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------------------FCNN 378
C + C+ CDG DC +G DE C+
Sbjct: 1016 HCVTDGTCIPERWSCDGDKDCEDGSDEKECEGTKRMCDPKAKFTCKDSGKCITKSWVCDG 1075
Query: 379 KADCENLKCSHKCSPT----PR------GAMCFCPAGQNPNKTQCVDA-------DECLI 421
DCE+ C P+ ++C P K C D D CL+
Sbjct: 1076 DIDCEDRSDEESCESAVCKPPKYPCANDSSVCLTPDKICNGKVDCADRSDEGPICDLCLV 1135
Query: 422 -DGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
G C CT VCSC G L K+C V+
Sbjct: 1136 ARGGCSHQCTVAPGKGVVCSCPPGLHLDSSNKTCEVVD 1173
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 139/350 (39%), Gaps = 57/350 (16%)
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERLEKAGMHGE 116
+ +Q+ + + N+S R A + D LNSW D E+ R+E+A M G
Sbjct: 585 RLDRASQTRKTLLEGNMSHPR---AIVVDPLNSWMYWTDWEEDEVNDSIGRIERAWMDGS 641
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR----C 172
NR VT N+ WP+ L +D++ +YWCD++ + +E + ++G+ V+ EL
Sbjct: 642 NRRIFVTSNMLWPNGLTLDHSSSTMYWCDAYYDHIEKIHLNGTGRMVVYSGKELNHPFGI 701
Query: 173 GSSNQCVALSKFCDG---KPDCSNGE------DEGPFCNAECTPGQFSCGMGKCIPESWK 223
+ +++ + + D SNG+ + P Q G C
Sbjct: 702 SHYRNFIFWTEYMNASVFQLDLSNGDITLLRSERPPLFGLRVYDAQSQQGDNACSVNYGG 761
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIV 277
C CL P + C + Q V CA S + +E C +
Sbjct: 762 CTTL--CLA----IPGGRVCACADNQVLEKNNVTCAASSSSLEPQRCKSDEFQCRNQRCI 815
Query: 278 ----------DNTDEDWDKFHQCFN-----GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D D ++ C+N Q +C+ + +CIP WLCD DC ++
Sbjct: 816 RALWKCDGDDDCLDGSDEEIQSCYNHTCPLNQFKCS-NNRCIPKRWLCDGTNDCGNNEDE 874
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+ + +A C ++ C + +C+ S CD + DC + DE
Sbjct: 875 SNS--------TCSAQPCQADQFSC-QNGRCIPHSWSCDREDDCGDKSDE 915
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E++ M G R L+ KN++ P+ L IDY +YW D L+ + S+R+DGS
Sbjct: 4010 QIEESAMDGSLRRVLLEKNLRRPTGLAIDYFNQRIYWADPELSQIGSMRLDGS 4062
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 27/148 (18%)
Query: 50 RILNGTHTLALEFNHRNQSL----------CFIQQQNVSSVRLRCAQINDL---LNSWDL 96
R L TLAL+F H +++ F V+ C + D + DL
Sbjct: 216 RSLRVNGTLALDFQHNQENVEQMAIDWLTGNFYFVDRVTDKIFVCDRGGDTCVTVLQLDL 275
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P+ LD ++E+ M G NR+ LV I+ P+++ +D + ++Y
Sbjct: 276 LNPKGIALDPLMGMLFFTDYGNVAKVERCNMDGTNRTRLVDYKIEQPTAVALDVVKKLVY 335
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W D++L+ ++ V G + + H +++
Sbjct: 336 WADAYLDYIDVVDYQGKNRHTIIHGSQV 363
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
++ CG G+CI CDG C + ++ C ++ + +++C+ + CD
Sbjct: 2472 EYECGNGECIDFQLTCDGIAHCKDKSDEKMQYCDNRSCRKGFRPCYNQRCVATSRFCD-- 2529
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DD DN+DE C + + C C+P + C++ +DC+ N +
Sbjct: 2530 ---GIDDCGDNSDEASCSNVTCGSSESSCK-DGTCVPSSAWCNQVIDCADASDEKNCNHT 2585
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V + + C S++ C+ S CDG DC + DE
Sbjct: 2586 NCSHFYKLGVK-EKDFISCNSTSLCIHPSWICDGANDCGDYADE 2628
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++ + G ++ LV+ I WP+ + IDY ++ LYWCD+ + +E + ++
Sbjct: 1978 IGRSRLDGSDQVTLVSSGITWPNGISIDYEENTLYWCDARTDKIERINLE 2027
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 197 EGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQ 251
+G + C G+F C C+PE W CDG DC ++ + + C + +C +Q
Sbjct: 12 QGMAADILCDVGEFHCHNHDTCVPEDWLCDGEPDCPDESDETDHVCAQEVVIRCPLNHIQ 71
Query: 252 CALSKKCIPHNWLCDEEMDC 271
C +KKCI N LC+ DC
Sbjct: 72 CTGTKKCIHFNKLCNGARDC 91
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 153 SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-----CTP 207
S G +LC E C + + CV CDG+PDC + DE A+ C
Sbjct: 8 SASPQGMAADILCDVGEFHCHNHDTCVPEDWLCDGEPDCPDESDETDHVCAQEVVIRCPL 67
Query: 208 GQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
C G KCI + C+G DC EDG DE C
Sbjct: 68 NHIQCTGTKKCIHFNKLCNGARDC-EDGYDEGVHC 101
>gi|339716243|gb|AEJ88360.1| vitellogenin receptor [Antheraea pernyi]
Length = 1812
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 161/392 (41%), Gaps = 82/392 (20%)
Query: 158 GSHNAVL---------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------- 199
G H+AV C N+ C S C++ S CDG DC +G DEGP
Sbjct: 1000 GKHSAVADLTTPPPLKCDWNQFTCKESPVCISRSLLCDGAKDCPDGSDEGPDNCDTLACF 1059
Query: 200 ----------------------FCN----------AECTPGQFSCGMGKCIPESWKCDGF 227
CN C PG + C +CI +CDG
Sbjct: 1060 DTEFMCASGSCILKTWKCDGDQVCNDASDEIDCESVSCKPGYYQCRDRECIELKKRCDGH 1119
Query: 228 VDCL----EDGSDEPNTC----IHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVD 278
DC E+ DEP IH+C + C ++ C+P C+ + DC
Sbjct: 1120 QDCFDYSDEEECDEPVAVEEPKIHRCAEWEYSCERNRSICLPITARCNMKTDCP-----G 1174
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD--EEMDCSTDDIVD-----NTDEDWDK 331
TDE + +G C +C+ N +CD +E D +D+ D N
Sbjct: 1175 GTDEIGCDYRCTPHGMFGCKQQIRCLAMNRVCDGNKEYDNGSDETPDACALVNRTSHLYP 1234
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
+ A C L CG + QC+ ++ CD P+C +G DE C + C+N C+H C
Sbjct: 1235 VMLYPAAECRDGFL-CG-NGQCIEWAEVCDRTPNCFDGSDESIHCFSA--CDNNTCAHAC 1290
Query: 392 SPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G C CPAG + P++ C D DEC G C Q C NT S++CSC GY R D
Sbjct: 1291 QATPLGPRCLCPAGYSAAPDRRTCADVDECRA-GLCSQACVNTPGSFLCSCHHGYAPRSD 1349
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+SC V SI++ S +R + +G
Sbjct: 1350 RRSCKTVT----GNMSILYVSGNTVRSVSADG 1377
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 118/289 (40%), Gaps = 39/289 (13%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-------QCALSKKCIPHN 262
F C G CI +S CDG VDC +DG+DE N C+ + Q C SKKCIP++
Sbjct: 36 FPCMSGGCIQQSQYCDGKVDC-DDGTDE-NYCLDHKPDAQFCNETHQFMCRDSKKCIPNH 93
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDD 320
W+C+ ++DC D +DE G+ + L KCI WLCD DC
Sbjct: 94 WICNNDIDCD-----DGSDELNCTLVPVATGKCKGFLCGDGKCISSLWLCDGSYDCKDKS 148
Query: 321 IVDNTDEDWDKYFSHNAV--------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + SH+ + L + +C S+ C+ CDG DC +G DE
Sbjct: 149 DENSPENCRHSLLSHSMLSGSDCQDWLGGRRQYKCTDSSFCLPSEMMCDGMQDCKDGSDE 208
Query: 373 GPFCNN-KADCENLKC---SHKCSPTPRGAMCFC-----PAGQNPNKTQCVDADEC-LID 422
FC N C N C C P G C C N + C D DEC L
Sbjct: 209 RSFCANWHTMCANHTCLGDKASCVPDRAGPTCECLNHLNLRRYNTSTGACDDIDECALAR 268
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C C N + C C +GY C A P ++F ST
Sbjct: 269 PQCSHYCVNADGHFTCECADGYFKDELKYLCYATG-----PEPLLFYST 312
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 62/162 (38%), Gaps = 39/162 (24%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIPESW 222
++ C S +C+ C+ DC +G DE P +C F CG GKCI W
Sbjct: 79 HQFMCRDSKKCIPNHWICNNDIDCDDGSDELNCTLVPVATGKCK--GFLCGDGKCISSLW 136
Query: 223 KCDGFVDCLEDGSDE--PNTCIHQCFN----------------GQVQCALSKKCIPHNWL 264
CDG DC +D SDE P C H + Q +C S C+P +
Sbjct: 137 LCDGSYDC-KDKSDENSPENCRHSLLSHSMLSGSDCQDWLGGRRQYKCTDSSFCLPSEMM 195
Query: 265 CDEEMDCSTDDIVDNTDE-----DWDKF---HQCFNGQVQCA 298
CD DC D +DE +W H C + C
Sbjct: 196 CDGMQDCK-----DGSDERSFCANWHTMCANHTCLGDKASCV 232
>gi|301760452|ref|XP_002916019.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Ailuropoda melanoleuca]
Length = 4636
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 107/295 (36%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQC 252
C C QF C G+CIP W CDG DC D SDE T C Q C + QC
Sbjct: 1039 CVHSCLDNQFRCSSGRCIPGHWACDGDNDC-GDFSDEAQTNCTRQEIHSPAGCNGDEFQC 1097
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWL 309
CIP W CD E DC D +DE C + C + +CI W+
Sbjct: 1098 HPDGNCIPDLWRCDGEKDCE-----DGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWI 1152
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSN 368
CD ++DC D +DED ++ LC P + C + ++ C+ K C+G+ DC +
Sbjct: 1153 CDGDIDCE-----DQSDED-----DCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPD 1202
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSC 425
G DEG C ++ N CS+ CS P RG +C CP G NK C D C C
Sbjct: 1203 GSDEGDLC-DECSLNNGGCSNHCSVVPGRGIVCSCPQGLQLNKDNKTCEIIDYCSNHLKC 1261
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1262 SQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1313
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 169/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2681 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 2740
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2741 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2795
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2796 -ATCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2853
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ S++ CDG DC + D
Sbjct: 2854 CIPKQFVCDHDDDCGDGSDESLQCGYRQCKAEEFSCADGRCLLNSQWQCDGDFDCPDHSD 2913
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2914 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 2973
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 2974 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 3032
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 3033 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3070
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 104/202 (51%), Gaps = 8/202 (3%)
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
W C G+ C C+ +WLCD + DC ++DE D + C N
Sbjct: 63 WSDQQLCDPGEFLCHDHVTCVSQSWLCDGDPDCPD-----DSDESLDTCPEEVEIKCPLN 117
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFC 402
+ C +N+C+ LS+ C+G DCS+G DEG C +C+ L C +KC+ C+C
Sbjct: 118 HVACLGANKCIHLSQLCNGVLDCSDGYDEGLHCQELLPNCQQLNCQYKCAMVRNSTRCYC 177
Query: 403 PAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
G + C D DEC I G+C QTC N++ SY CSC EGY ++PD +SC A N P
Sbjct: 178 EDGFEVKEDGRSCRDQDECAIYGACSQTCINSYGSYACSCVEGYIMQPDNRSCKAKNEPT 237
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D ++ +++ I +LNGS
Sbjct: 238 DRLPMLLIANSETIEVFYLNGS 259
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/371 (28%), Positives = 145/371 (39%), Gaps = 91/371 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C + +C S+ QC++ CDG DC GEDE
Sbjct: 3569 FWCDGDFDCADGS--DERNCETSCSKGQFQC-SNGQCISAKWKCDGHEDCKYGEDEKHCE 3625
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3626 PASPTCSSSEYICASRGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKAHCI 3683
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3684 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNMCRADEFLCNNSLCKLHFWVCDGE 3733
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3734 DDCGDNSDEAPDMCAKFLCPPTRPYRCRNNRICLQPEQMCNGIDDCGDNSDEDHCGGKLT 3793
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNN 378
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3794 YKARPCKKDEFAC-SNKKCIPMDLQCDQFDDCGDGSDEQGCRITSAEYTCEDNVNP-CGD 3851
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3852 DAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINIEGSY 3902
Query: 437 VCSCTEGYTLR 447
C C + + R
Sbjct: 3903 KCVCDQNFQER 3913
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3354 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3412
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3413 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3466
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3467 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3516
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3517 EFQC-RNNNCIPDHWRCDSQNDCSDNSDE 3544
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ GQF C G+CI WKCDG DC +
Sbjct: 3560 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKGQFQCSNGQCISAKWKCDGHEDC-KY 3617
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S+ CI + C+ E DC+ D +DE D +C
Sbjct: 3618 GEDEKHCEPASPTCSSSEYICA-SRGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3670
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3671 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNMCRADEFLCNNS- 3721
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3722 LCKLHFWVCDGEDDCGDNSDEAP 3744
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 109/236 (46%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3473 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCRNNNCIPDHWRC 3532
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3533 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3584
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C GQ QC+ + +CI W CD DC ED +K+ + C +E
Sbjct: 3585 NCETSCSKGQFQCS-NGQCISAKWKCDGHEDCK-------YGED-EKHCEPASPTCSSSE 3635
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C +S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3636 YIC-ASRGCISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCRNKAHCIPIRWLC 3689
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3394 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3452
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3453 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3506
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3507 NCDKKTCGPHEFQCR-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3555
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3556 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3583
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ SK CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2600 RCIPHSKLCDGENDCGDNSDELDCKVSTCAAVEFRCADGTCIPRSARCNQNIDC-ADASD 2658
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E + C H G ++C + C+ +W+CD DC D D
Sbjct: 2659 EKSCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2716
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2717 HKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2764
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE----NLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE A C + + SH C P
Sbjct: 2765 -SAQKCISKHWICDGEDDCGDGLDESDSICGAATCAADMFSCQGSHACVPRHWLCDGERD 2823
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2824 CPNGSDELSTAGCAPNNT 2841
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 125/338 (36%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC C Q C + +CIP
Sbjct: 920 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCQMDQFSCG-NGRCIP 978
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 979 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 1038
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + Q +C+ S +CIP +W CD + DC D D + + H+ C+ +E
Sbjct: 1039 CVHSCLDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQTNCTRQEIHSPAGCNGDEF 1095
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE----GPF----------------CNNKA----- 380
+C C+ CDG+ DC +G DE G C NKA
Sbjct: 1096 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWICDG 1155
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P + C P + C D DEC L
Sbjct: 1156 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPDGSDEGDLCDECSL 1215
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC +G L D K+C ++
Sbjct: 1216 NNGGCSNHCSVVPGRGIVCSCPQGLQLNKDNKTCEIID 1253
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 39/234 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH+ LCD E
Sbjct: 2552 EFECGNGECIDYQLTCDGAPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHSKLCDGE 2611
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
DC DN+DE K C + +CA CIP + C++ +DC+ D +DE
Sbjct: 2612 NDCG-----DNSDELDCKVSTCAAVEFRCA-DGTCIPRSARCNQNIDCA-----DASDEK 2660
Query: 328 ---DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ D + + +RC S++ CV S CDG DC + DE
Sbjct: 2661 SCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCGDYSDE------------ 2708
Query: 385 LKC----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
LKC HKC G CP+G+ T D + DG CD +C+
Sbjct: 2709 LKCPVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 2758
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 688 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 747
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 748 WCDAYYDHIEKVFLNGTHRKIVYSGKEL 775
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 131/366 (35%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3160 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3219
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3220 YVNQRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3271
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDGS 235
++G D N+ P+ K ++ L G
Sbjct: 3272 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGK 3331
Query: 236 DEPNTC-------------IHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
C + C Q +C + KCIP W CD DC
Sbjct: 3332 THTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3390
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3391 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3450
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3451 LRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3500
Query: 368 NGEDEG 373
+ DE
Sbjct: 3501 DASDEA 3506
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + +
Sbjct: 4089 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVISVSS 4148
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 4149 KQGLLHPHRI 4158
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ +E +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1085 HSPAGCNGDEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKG-CNGTLRLCDHKTKFSCRST 1143
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 1144 GRCINKAWICDGDIDC-EDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDC 1200
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY + LYWCD+ + +E + ++ G+ VL
Sbjct: 2058 IGKARLDGSEKVILVSMGIAWPNGISIDYEEHKLYWCDARTDKIERIDLETGGNREMVLS 2117
Query: 166 HPN 168
N
Sbjct: 2118 GSN 2120
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ VE V G + +
Sbjct: 387 KVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQ 446
Query: 167 PNELR 171
++R
Sbjct: 447 GRQVR 451
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C +N+C+ LS+ C+G DCS+G DEG C E P Q+ C M +
Sbjct: 112 IKCPLNHVACLGANKCIHLSQLCNGVLDCSDGYDEGLHCQ-ELLPNCQQLNCQYKCAMVR 170
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 171 NSTRCYCEDGF-EVKEDG 187
>gi|344246161|gb|EGW02265.1| Prolow-density lipoprotein receptor-related protein 1 [Cricetulus
griseus]
Length = 2217
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 164/338 (48%), Gaps = 28/338 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 399 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 457
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE + C++ C + + C ++ CIP +++CD + D
Sbjct: 458 HVCVPERWLCDGDKDCA-DGADESISAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 515
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 328
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 516 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DQSDEAP 565
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCENLKC 387
+ + + C+ + SS +CVA + C+G+ DC +G DE G N + + C
Sbjct: 566 KNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLNRKLSGC 625
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
S C G C C G + C D DEC C Q C NTH SY C C EGY
Sbjct: 626 SQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQLCVNTHGSYKCLCVEGYA 685
Query: 446 LR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +R+++L+GS
Sbjct: 686 PRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 720
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 153/369 (41%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 1209 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 1267
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 1268 DGDHDCA-DGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 1318
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 1319 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 1366
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 1367 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTTQNPHCKDKKEFLCRNQR 1426
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 1427 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCMRTEKAAYCACRSGF 1486
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT S++CSC + T + +G + +
Sbjct: 1487 HTVPGQPGCQDINECLRFGTCSQLCNNTKGSHLCSCARNFMKTHNTCKAEGSEYQVLYIA 1546
Query: 460 QDEPASIIF 468
D +F
Sbjct: 1547 DDNEIRSLF 1555
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 999 DGRTCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 1057
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 1058 ICTNPAFICDGDNDC-QDSSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 1113
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 1114 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 1162
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 1163 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 1199
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 247 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 305
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C NW+CD DC D D D
Sbjct: 306 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPNWVCDGANDCG--DYSDERDCPG 363
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 364 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 411
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 412 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 446
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R+DG+ V
Sbjct: 1698 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLDGTDPVV 1754
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 843 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 899
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 27 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 86
Query: 164 L 164
+
Sbjct: 87 I 87
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 202 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 259
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 260 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 314
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A + CDG DC + DE
Sbjct: 315 TDCSSYFRLGVKGVLFQP----CERTSLCYAPNWVCDGANDCGDYSDE 358
>gi|410899448|ref|XP_003963209.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Takifugu rubripes]
Length = 4556
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 100/196 (51%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + Q C CI W CD E DC D +DE D C NE C
Sbjct: 46 CSSKQFVCKDQVTCISKGWRCDGEKDCP-----DGSDESPDICSHSKVNQCLVNEHGCLD 100
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQN- 407
C+ +SK CDG PDC++G DEGP C +A C KC CS T G C+C AG
Sbjct: 101 PEVCIPMSKLCDGVPDCTDGWDEGPHCREQAPACTAQKCQFNCSVTHDGPRCYCLAGYEV 160
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ C D +EC + G+C QTCTNT SY CSC EGY L+PD +SC A N P D +
Sbjct: 161 AADGRTCKDFNECNVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPML 220
Query: 467 IFSSTVDIRRIHLNGS 482
+ ++ DIR L+GS
Sbjct: 221 LIANLHDIRCTTLSGS 236
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 153/322 (47%), Gaps = 37/322 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 998 ANGRCININWRCDNDNDCGDNSDEAG-CSHSCSSVQFKCNSGRCIPEYWTCDGDNDCGDY 1056
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC + CIP W CD + DC +D +DE
Sbjct: 1057 SDETHANCTNQATRPPGGCHVDEFQCRIDSLCIPMRWRCDGDTDC-----MDLSDESHCE 1111
Query: 285 DKFHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + C S +CI W+CD + DC DN+DED + +A++C +
Sbjct: 1112 GVTHMCDPAVKFSCKDSARCISKAWVCDGDSDCE-----DNSDED-----NCDALVCKLS 1161
Query: 344 ELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C +++ C+ K CDG DC +G DE C+ A +N CSH C+ P G MC
Sbjct: 1162 HHTCATNDSICLPAEKLCDGTDDCPDGSDE-KLCDLCA-LDNGGCSHNCTIIPGEGFMCS 1219
Query: 402 CPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
CP G NKT C C C Q C S CSC EG+ L D +SC + +
Sbjct: 1220 CPLGMELGADNKT-CQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELESDMESCKSTDP 1278
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1279 FK---PFIIFSNRHEIRRIDLH 1297
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 158/364 (43%), Gaps = 76/364 (20%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC NG DE C+ CT QF C +CI W CDG DC DG
Sbjct: 2710 SGRCIPMSWTCDKENDCENGADE-THCDKFCTSTQFECANHRCISSHWVCDGSDDC-GDG 2767
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE C + C QC S C+P W CD +MDC D DE N
Sbjct: 2768 SDEDQKCKSKTCSPEAFQCPGSHMCVPQRWKCDGDMDCP-----DGADESVKAGCMYTNS 2822
Query: 294 ------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+ C +++CIP +++CD ++DCS D +DE + + C P+E RC
Sbjct: 2823 TCDPENEFMCQ-NRQCIPKHFVCDLDVDCS-----DGSDESPECEYP----TCGPDEFRC 2872
Query: 348 GSSNQCVALSKF-CDGKPDCSNGEDEGP----------FCNNKA---------------- 380
++ +C+ K+ CDG+ DC + DE P CN+ A
Sbjct: 2873 -ANGRCLNQKKWECDGEFDCHDHSDEAPKNPRCTDSERACNDSAFMCRNGNCLNETLLCD 2931
Query: 381 -----------------DCENLK---CSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADE 418
+C N K CS C G C C G + CVD DE
Sbjct: 2932 RNDDCGDGSDELNCFINECLNSKLSGCSQLCDDLKIGYKCRCHPGFQLKRDGRTCVDIDE 2991
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C C Q C NTH S+ C C +G+ L P+ T +E +IF++ +R+++
Sbjct: 2992 CTTTYPCSQRCINTHGSFHCLCVDGFELSPNDP--TICKSTSEEEPYLIFANRYYLRKLN 3049
Query: 479 LNGS 482
L+GS
Sbjct: 3050 LDGS 3053
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 117/236 (49%), Gaps = 25/236 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ L CDG DC N EDE C+A C P Q+ C G+CIP SW
Sbjct: 908 CPADRFKC-QNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYPCASGRCIPISW 966
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CD DC D SDEP++C + CF Q CA + +CI NW CD + DC DN+
Sbjct: 967 TCDLDDDC-GDRSDEPDSCAYPTCFPLTQFTCA-NGRCININWRCDNDNDCG-----DNS 1019
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE H C + Q +C S +CIP W CD + DC D D T + + C
Sbjct: 1020 DEA-GCSHSCSSVQFKCN-SGRCIPEYWTCDGDNDCG--DYSDETHANCTNQATRPPGGC 1075
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR 396
H +E +C + C+ + CDG DC + DE + CE + +H C P +
Sbjct: 1076 HVDEFQCRIDSLCIPMRWRCDGDTDCMDLSDE-------SHCEGV--THMCDPAVK 1122
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/228 (35%), Positives = 117/228 (51%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3418 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPTQFQCAITKRCIPRVW 3477
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3478 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 3534
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ + C Q +C + +C+P W CD + DC DN+DE DK C
Sbjct: 3535 EECAE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDE--DKCMPRQ---CS 3582
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C+ K D ++ +C++
Sbjct: 3583 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDEHG-CDLKCDIDHFQCNN 3628
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 142/349 (40%), Gaps = 75/349 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +F+C G+CI WKC
Sbjct: 3542 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDKCMPRQCSESEFACTNGRCIAGRWKC 3600
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + C +C QC + CIP W CD + DC +D +DE+
Sbjct: 3601 DGDHDC-ADGSDE-HGCDLKCDIDHFQCN-NGHCIPIRWRCDADPDC-----LDGSDEEN 3652
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + C P W CD E DC DN+DE+ ++ C P
Sbjct: 3653 CGTERHCPVDEFQCN-NTLCKPLAWKCDGEDDCG-----DNSDENPEEC---RKFQCPPT 3703
Query: 344 E-LRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFC--------NNKADCENLK 386
RC + C+ +SK CDG +C + DE P C NN+ L+
Sbjct: 3704 RAFRCQNDRVCLQVSKRCDGVSNCGDNSDELNCQIPPAIPTCEKDEFLCANNRCISSTLR 3763
Query: 387 CSH------------------------------------KCSPTPRGAMCFCPAG-QNPN 409
C+ C + C C AG Q
Sbjct: 3764 CNFFNDCEDFGSDEIGCKTDTKLTDCRSNRTQCGDGDEAHCVTNGTDSFCSCKAGFQKIG 3823
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C D +ECL G C C NT SY CSC + +T D +C A N+
Sbjct: 3824 HRTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRISD--TCKADNI 3870
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 147/362 (40%), Gaps = 90/362 (24%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
+++KA M G + +T K + WP+ L +D Q ILYW D++ + +E V ++ + V
Sbjct: 696 KIKKAWMDGSHHQIFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIEMVYLNTTERKVVY 755
Query: 164 ----------LCHP------NELRCGS--------------------------------- 174
LCH NE R GS
Sbjct: 756 EGQELNHAFGLCHYKQFLFWNEYRGGSIYKLDQLFKTVTLLRNERPPIFEIRVYDAHQQQ 815
Query: 175 -SNQCV----ALSKFCDGKPD---CSNGEDE-----GPFCNA--------ECTPGQFSCG 213
SN C S C PD C +D+ C A +C PG+F+C
Sbjct: 816 GSNTCRVNNGGCSSLCLAIPDGRSCGCADDQILDADNVTCKANPSYVPPPKCQPGEFACK 875
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
+CI E WKCDG DCL++ + P C H C + +C + +CIP WLCD + DC
Sbjct: 876 NNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPADRFKCQ-NNRCIPLRWLCDGDNDCG 934
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D+ NT C Q CA S +CIP +W CD + DC D +DE
Sbjct: 935 NDEDESNTTC---SARTCPPNQYPCA-SGRCIPISWTCDLDDDCG-----DRSDEPDSCA 985
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHKC 391
+ C P ++ +C+ ++ CD DC + DE C++ KC S +C
Sbjct: 986 YP----TCFPLTQFTCANGRCININWRCDNDNDCGDNSDEAG-CSHSCSSVQFKCNSGRC 1040
Query: 392 SP 393
P
Sbjct: 1041 IP 1042
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 154/441 (34%), Gaps = 135/441 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 3107 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALAVDVRYGYL 3165
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVI--------------DY------- 136
+ + GM G NRS +V + I WP+ L + DY
Sbjct: 3166 YWSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRIYWADAREDYIEFASLD 3225
Query: 137 --------NQDI------------LYWCDSHLNTVESV-RVDGSHNA------------- 162
N DI +YW D ++ + G++
Sbjct: 3226 GTNRHTVLNHDIPHIFAMTLFEEYIYWTDWETKSINRAHKTQGTNKTTLISTLHRPMDVH 3285
Query: 163 ---------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
VL HP + G + LS K C + C + CT QF
Sbjct: 3286 IYHPYRQPEVLNHPCQTNNGGCSNLCLLSPGGGYKCACPTNFYLASDHRTCMSNCTASQF 3345
Query: 211 SCGMGKCIPESWKCDGFVDC---------------------------------------L 231
C KCIP WKCD DC
Sbjct: 3346 VCKNDKCIPFWWKCDTEDDCGDRSDEPADCPEFKCRPGQFQCGTGICTNPAYICDGDNDC 3405
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
+D SDE N IH C Q +C+ +CIP + C+ + +C D DE C
Sbjct: 3406 QDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCG-----DGEDEKDCPEVTCA 3460
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 3461 PTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSG 3511
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 3512 RCIPARWKCDGEDDCGDASDE 3532
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SVR+DGS +
Sbjct: 4035 KIETAAMDGTLRQTLVHENIQWPTGLAVDYYNERLYWADAKLSVIGSVRLDGSDPVI 4091
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E++ + G R LV +I WP+ + IDY + +LYWCD+ + +E + ++ N L
Sbjct: 2038 RIERSRLDGSQRFVLVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENRELVL 2097
Query: 167 PN 168
N
Sbjct: 2098 AN 2099
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 11/165 (6%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEE 268
F CG G CI S CDG C + ++ + C ++ C G +C ++ +CI H + CD
Sbjct: 2535 FECGNGDCINYSLTCDGMAHCKDKSDEKQSYCANRICKKGYRRC-INGRCIGHQFWCD-- 2591
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDE 327
TDD D++DE C G+ QC CI + CD+ ++C D ++
Sbjct: 2592 ---GTDDCGDHSDELPCNMTLCKPGEFQCK-DGSCISNFSRCDQVVNCEDASDEMNCQST 2647
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D ++F + C + C S CDG DC + DE
Sbjct: 2648 DCSRFFRLGVK--GASFQSCERTTLCYLSSWVCDGNNDCGDFSDE 2690
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 132/351 (37%), Gaps = 84/351 (23%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+W+ AP I +A ++G N ++ +I+ P+ L ID+ + LY+ D+ L+
Sbjct: 2352 FWTNWNEQAPSIM-------RASLNGANVLVIIGSDIKTPNGLAIDHRAEKLYFSDATLD 2404
Query: 150 TVESVRVDGSHNAVL-----CHPNELRCGS---------SNQCVALSKFCDGKPDCSNGE 195
+E DGS VL HP L + K+ G +
Sbjct: 2405 KIERCEYDGSSRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADKYTGGDMKVLRAD 2464
Query: 196 -DEGPFC---------NAECTPGQFSCG--MGKCIPESWKCDGFVDCLEDGSD---EPNT 240
+ P N E +P + + G C+P S DG V+C G E +T
Sbjct: 2465 IPQQPMGIVAVANDTNNCEFSPCRTNNGGCQDLCLPTS---DGRVNCSCRGDRQLLEDST 2521
Query: 241 CI-----------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKF 287
C +C NG CI ++ CD C D +DE +
Sbjct: 2522 CSSLNMSCGSVDDFECGNGD--------CINYSLTCDGMAHCK-----DKSDEKQSYCAN 2568
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
C G +C ++ +CI H + CD TDD D++DE N LC P E +C
Sbjct: 2569 RICKKGYRRC-INGRCIGHQFWCD-----GTDDCGDHSDE-----LPCNMTLCKPGEFQC 2617
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C++ CD +C + DE +C++ CS +GA
Sbjct: 2618 -KDGSCISNFSRCDQVVNCEDASDE-------MNCQSTDCSRFFRLGVKGA 2660
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 365 RVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 422
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-PNTCIH----QCFNGQVQCALSKKC 258
C+ QF C CI + W+CDG DC DGSDE P+ C H QC + C + C
Sbjct: 46 CSSKQFVCKDQVTCISKGWRCDGEKDC-PDGSDESPDICSHSKVNQCLVNEHGCLDPEVC 104
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
IP + LCD DC+ + WD+ C C K
Sbjct: 105 IPMSKLCDGVPDCT---------DGWDEGPHCREQAPACTAQK 138
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 159 SHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPG--QFSC 212
SH+ V C NE C C+ +SK CDG PDC++G DEGP C + CT QF+C
Sbjct: 84 SHSKVNQCLVNEHGCLDPEVCIPMSKLCDGVPDCTDGWDEGPHCREQAPACTAQKCQFNC 143
Query: 213 GMGKCIPESWKCDGF 227
+ P + G+
Sbjct: 144 SVTHDGPRCYCLAGY 158
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T + WP+ L +DY + + W D+ + +
Sbjct: 1418 WDASLP-------RIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDARSDAI 1470
Query: 152 ESVRVDGS 159
S DGS
Sbjct: 1471 YSAMYDGS 1478
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESW 222
LC P RC C+ LS D S+ E C+ +FSC +CI ++W
Sbjct: 1087 LCIPMRWRCDGDTDCMDLS-------DESHCEGVTHMCDPAV---KFSCKDSARCISKAW 1136
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC ED SDE N C CA + C+P LCD TDD D +D
Sbjct: 1137 VCDGDSDC-EDNSDEDNCDALVCKLSHHTCATNDSICLPAEKLCD-----GTDDCPDGSD 1190
Query: 282 E 282
E
Sbjct: 1191 E 1191
>gi|326920445|ref|XP_003206483.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Meleagris gallopavo]
Length = 1926
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 155/327 (47%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC S C+A FCDG DC +G DE A C+ +F C G+CI +
Sbjct: 193 CSEKEFRC-SDGSCIAEHWFCDGDTDCKDGSDEENCPSDVPAATCSLEEFQCAYGRCILD 251
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C +G+ C S CI W CD + DC D
Sbjct: 252 IYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCN-SGLCINAGWRCDGDSDCD-----DQ 304
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 305 SDERNCTTSMCTADQFRCK-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENTGTPQ 356
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCSHKCS 392
C P++ CG+ +C+ K C+G DC +G DE P N + + N C+ KC
Sbjct: 357 CAPDQFLCGNG-RCIGQRKLCNGANDCGDGSDESPHQNCRPRTGEENCNINNGGCAQKCQ 415
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D +EC +G C Q CTN+ + C C +GY LRPD
Sbjct: 416 MVRGMVQCTCHTGYRLLEDGRSCQDVNECAEEGYCSQGCTNSEGGFQCWCEQGYELRPDK 475
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 476 RSCKALG---PEPV-LLFANRIDIRQV 498
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 72 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 131
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 132 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFSCQ-NGYCIRSLWHCDGDNDCG-----DNS 184
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + +C+ CI +W CD + DC D +DE+
Sbjct: 185 DEQCD-MRKCSEKEFRCS-DGSCIAEHWFCDGDTDCK-----DGSDEE 225
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS+ VL
Sbjct: 909 KIERAGMDASNRLVIISSNLTWPNGLAIDYESQRLYWADAGMKTIEYASLDGSNRKVLIG 968
Query: 167 PN 168
N
Sbjct: 969 SN 970
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 17/136 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLN-SWDLP-APEIFPLD---- 105
L T LA+++ RN + V RL + L+N S D P A +FP
Sbjct: 1453 LKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVLINNSLDEPRAIAVFPKKGYLF 1512
Query: 106 -------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES ++G
Sbjct: 1513 WTDWGHVAKIERANLDGSERKILINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESCDLNG 1572
Query: 159 SHNAVLC----HPNEL 170
VL HP L
Sbjct: 1573 KLRQVLVSQVSHPFAL 1588
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G R L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1217 KLERSGMDGSGRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEAADLNGANRRTLLS 1276
Query: 167 P 167
P
Sbjct: 1277 P 1277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 535 DRIMRANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 594
Query: 166 HPN 168
N
Sbjct: 595 WQN 597
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 623 RIEYSNMDGSNRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGRNRKAV 680
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++ ++G N ++ + ++ L +D+ LYW D+ NTVE R+DGS VL
Sbjct: 1435 IRRSDLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTVEVARLDGSSRKVL 1491
>gi|358030301|ref|NP_001239587.1| low-density lipoprotein receptor isoform 2 precursor [Mus musculus]
Length = 810
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|74213055|dbj|BAE41671.1| unnamed protein product [Mus musculus]
Length = 810
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|82524130|emb|CAJ19121.1| vitellogenin receptor [Blattella germanica]
Length = 1818
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 150/362 (41%), Gaps = 86/362 (23%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
SS +CV + CD PDC++G DE N C P F C +G C+P+ W CDG DC+ D
Sbjct: 1026 SSGECVDIHDRCDHYPDCTDGSDESNCENVSCPPTDFKCHIGVCVPKYWVCDGEPDCI-D 1084
Query: 234 GSDEPN--------------------------------------TCIHQ----CFNGQVQ 251
G+DE N TC H C ++
Sbjct: 1085 GTDELNCAPITCGPDLFSCNNGRCVDKKLVCNHNDDCGDSSDEITCKHASSVVCQTTEIT 1144
Query: 252 CALSKK----CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
C K C+P + C++ DC D D +C + Q +C +CIP
Sbjct: 1145 CTSHNKSVISCVPMSARCNDIPDCPLGD-------DERGCEKCMDFQFKCN-DGRCIPFE 1196
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS----------SNQCVALS 357
W CD DC+ D +DE N + CH + G+ + CV+LS
Sbjct: 1197 WTCDGTKDCA-----DGSDE--------NQMHCHSQSVETGTPGPCTEYSCDNGACVSLS 1243
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVD 415
C+G+ DCS+ DEG FC + E C C TPRG C C G N +C D
Sbjct: 1244 LVCNGRQDCSDSSDEGGFCGSSCK-EGYPCQQVCMKTPRGPQCGCSKGFKLLNNGAKCQD 1302
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
+EC C Q C NT S+ C C G+ LR D SC A+ ++ IF + IR
Sbjct: 1303 INECE-SQVCAQVCHNTPGSFSCICDAGFELRSDRISCKAIGKAKE----FIFVADKQIR 1357
Query: 476 RI 477
R+
Sbjct: 1358 RV 1359
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/317 (33%), Positives = 146/317 (46%), Gaps = 34/317 (10%)
Query: 178 CVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
C++ +K CDG DC++G DE FC P F C G+CI +CD DC +
Sbjct: 40 CISETKHCDGHVDCTDGSDEVDCNQVFCKE---PDWFRCRNGRCISSGMRCDDDDDCGDW 96
Query: 234 GSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFH 288
++ H C + + +C + CI +W+CD DC +D +DE
Sbjct: 97 SDEDDCHIEHVPKNCTDSEWRC-MDNNCIIIDWVCDGRQDC-----MDGSDELQGCSTVL 150
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFSHNAVLCHPNEL 345
C +G C + C+P + CD DC DN+DED+ Y N
Sbjct: 151 SCHDG-FMCK-NGHCLPITFHCDGSDDCG-----DNSDEDYCPSVHYIPPENCTTDKNLH 203
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCPA 404
C C++L++ CD C + DEGP CNN K C C+H+C PTP+G C C
Sbjct: 204 LCHDGRTCISLNELCDEVQHCPDHSDEGPGCNNSKITCRTAWCNHRCIPTPQGPQCVCQT 263
Query: 405 GQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G CVD DECL G CDQ C N Y C C EGY L D ++C A +P
Sbjct: 264 GYTMAVNNTCVDIDECLEYGICDQKCLNMPGKYDCYCDEGYELAEDKRTCRATGA---DP 320
Query: 464 ASIIFSSTVDIRRIHLN 480
++F+ST +IR ++
Sbjct: 321 L-LVFASTDEIRGFYIK 336
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 113/249 (45%), Gaps = 51/249 (20%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V+C ++ +C S N C+ + C+G+ DC +GEDE +C QF+C G+CI
Sbjct: 938 VVCSEDKFKCKSDNLCIPRNFRCNGRKDCQSGEDELDCEAKKCLDSQFTCKNGQCISIEK 997
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+G DCL DGSDE N +C Q +C+ S +C+ + CD DC+ D +D
Sbjct: 998 LCNGERDCL-DGSDEKNC--EKCEEAIQFKCS-SGECVDIHDRCDHYPDCT-----DGSD 1048
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------- 316
E + C +C + C+P W+CD E DC
Sbjct: 1049 ESNCENVSCPPTDFKCHIG-VCVPKYWVCDGEPDCIDGTDELNCAPITCGPDLFSCNNGR 1107
Query: 317 ---------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ----CVALSKFCDGK 363
DD D++DE K+ S +V+C E+ C S N+ CV +S C+
Sbjct: 1108 CVDKKLVCNHNDDCGDSSDEITCKHAS--SVVCQTTEITCTSHNKSVISCVPMSARCNDI 1165
Query: 364 PDCSNGEDE 372
PDC G+DE
Sbjct: 1166 PDCPLGDDE 1174
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 95/256 (37%), Gaps = 71/256 (27%)
Query: 161 NAVLCHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
++V+C E+ C S N+ CV +S C+ PDC G+DE +C QF C G+
Sbjct: 1134 SSVVCQTTEITCTSHNKSVISCVPMSARCNDIPDCPLGDDERGC--EKCMDFQFKCNDGR 1191
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CIP W CDG DC DGSDE C + V+ C ++
Sbjct: 1192 CIPFEWTCDGTKDC-ADGSDENQM---HCHSQSVETGTPGPCTEYS-------------- 1233
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
C NG C+ + +C+ DCS D++DE
Sbjct: 1234 -------------CDNG--------ACVSLSLVCNGRQDCS-----DSSDEGGFCGSSCK 1267
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ Y + P +CG S L + G C + +CE+ C+
Sbjct: 1268 EGYPCQQVCMKTPRGPQCGCSKGFKLL--------------NNGAKCQDINECESQVCAQ 1313
Query: 390 KCSPTPRGAMCFCPAG 405
C TP C C AG
Sbjct: 1314 VCHNTPGSFSCICDAG 1329
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 71/161 (44%), Gaps = 39/161 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
C +E RC N C+ + CDG+ DC +G DE C+ C G F C G C+P ++
Sbjct: 111 CTDSEWRC-MDNNCIIIDWVCDGRQDCMDGSDELQGCSTVLSCHDG-FMCKNGHCLPITF 168
Query: 223 KCDGFVDCLEDGSDE----------PNTC-----IHQCFNGQVQCALSKKCIPHNWLCDE 267
CDG DC D SDE P C +H C +G + CI N LCDE
Sbjct: 169 HCDGSDDC-GDNSDEDYCPSVHYIPPENCTTDKNLHLCHDG-------RTCISLNELCDE 220
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS---KKCIP 305
C D++DE C N ++ C + +CIP
Sbjct: 221 VQHCP-----DHSDEG----PGCNNSKITCRTAWCNHRCIP 252
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +AGM G ++ N+ + + L ID + D LYW D+ +ES ++DG+ ++
Sbjct: 458 IARAGMDGSKPEAFISTNLHYANGLTIDIHNDRLYWVDAKYLVIESCKLDGTDRRIILQ- 516
Query: 168 NELR 171
NE++
Sbjct: 517 NEVK 520
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 91 LNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
+++W++ P+ L +A M GENR LV +++ + +D + ++ D H NT
Sbjct: 1480 ISTWNIEIPKSI-----LIRADMSGENRKTLVNEHMMLVYGIALDVVRKRIFIADEHQNT 1534
Query: 151 VESVRVDGSHNAVLCHPNE 169
+ES+ G V+ NE
Sbjct: 1535 IESMGYSGEDRHVVVDSNE 1553
>gi|332020904|gb|EGI61302.1| Very low-density lipoprotein receptor [Acromyrmex echinatior]
Length = 902
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 115/370 (31%), Positives = 153/370 (41%), Gaps = 63/370 (17%)
Query: 160 HNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ C P + C S N +CVAL+ CD PDCS+G DE CN C +F+C CI
Sbjct: 121 YRTKTCTPEQFTCHSGNGECVALTWMCDDNPDCSDGSDEAE-CNDTCRSDEFTCANKHCI 179
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI 276
+ W CD DC D SDE C G CI W CD + DC +D++
Sbjct: 180 QQLWVCDNDNDC-GDNSDEKGCGPITCHPGTDFACSENYCITSRWRCDGDYDCPDRSDEM 238
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ K C N + C CI W+CD E DCS + DE + HN
Sbjct: 239 GCKDIQNGKKISHCENKEFDCDDGVTCIHQTWVCDGEKDCS-----NGADESPQR--CHN 291
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----------------------- 373
V C P++ +C C++ +C+GK +CS+G DE
Sbjct: 292 -VTCRPDQFQCEDRRSCISGHLYCNGKAECSDGSDEKNCTSKIVSCDPRIQFECSEGSCI 350
Query: 374 ---PFCNNKADC------------------ENLKCSHKCSPTPRGAMCFCPAGQN--PNK 410
CN DC N CS C P G C C G N+
Sbjct: 351 PLENVCNKNPDCIGWEDESAELCGVNECAKNNGGCSQICVDLPIGYRCDCRTGYRLIDNR 410
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
T C D DECL GSC Q C N + CSC GY P ++ T + AS++F+
Sbjct: 411 T-CDDIDECLEPGSCSQFCHNEKGGFKCSCATGYLKDP--RNLTRCKAAEGH-ASLLFAR 466
Query: 471 TVDIRRIHLN 480
DIR++ L+
Sbjct: 467 RHDIRKVALD 476
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 155/437 (35%), Gaps = 120/437 (27%)
Query: 117 NRSPLVTKNIQWPSSLVID--YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGS 174
+RS N+ W L++ I SH N +++ C + +C S
Sbjct: 4 DRSSTRPTNVSWCILLLLACAITPSISAIAHSHTNISDTLE---------CKDTDFKC-S 53
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGP----------------------------------- 199
+ +C+ CDG DC +G DE
Sbjct: 54 NGRCIPNIWHCDGDRDCPDGTDEDSAVCRLIPCNEREFECSPGECIPKTWLCDHQTDCSN 113
Query: 200 -------FCNAECTPGQFSC--GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV 250
+ CTP QF+C G G+C+ +W CD DC DGSDE C C + +
Sbjct: 114 GLDEKDCYRTKTCTPEQFTCHSGNGECVALTWMCDDNPDC-SDGSDEAE-CNDTCRSDEF 171
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
CA +K CI W+CD + DC DN+DE C G CI W C
Sbjct: 172 TCA-NKHCIQQLWVCDNDNDCG-----DNSDEKGCGPITCHPGTDFACSENYCITSRWRC 225
Query: 311 DEEMDC-STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
D + DC D + D K SH C E C C+ + CDG+ DCSNG
Sbjct: 226 DGDYDCPDRSDEMGCKDIQNGKKISH----CENKEFDCDDGVTCIHQTWVCDGEKDCSNG 281
Query: 370 EDEGP--------------------------FCNNKADCENLKCSHKCSPT-----PRGA 398
DE P +CN KA+C + C+ PR
Sbjct: 282 ADESPQRCHNVTCRPDQFQCEDRRSCISGHLYCNGKAECSDGSDEKNCTSKIVSCDPRIQ 341
Query: 399 MCFCPAG----------QNPN-------KTQCVDADECLI-DGSCDQTCTNTHLSYVCSC 440
C G +NP+ + +EC +G C Q C + + Y C C
Sbjct: 342 F-ECSEGSCIPLENVCNKNPDCIGWEDESAELCGVNECAKNNGGCSQICVDLPIGYRCDC 400
Query: 441 TEGYTLRPDGKSCTAVN 457
GY L D ++C ++
Sbjct: 401 RTGYRL-IDNRTCDDID 416
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAV 163
+ R+E+AGM G +RS +V +++WP+ L +D +YW D+ LN + S DG+ V
Sbjct: 597 EARIERAGMDGTHRSVIVGNDVKWPNGLALDLIGKRVYWVDAKLNIIGSCNYDGTGRRTV 656
Query: 164 LCHPNELR 171
L P LR
Sbjct: 657 LYSPESLR 664
>gi|345784251|ref|XP_533343.3| PREDICTED: low-density lipoprotein receptor-related protein 1B [Canis
lupus familiaris]
Length = 4573
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 139/295 (47%), Gaps = 35/295 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQC 252
C C QF C G+CIP W CDG DC D SDE T C + C + QC
Sbjct: 976 CVHSCLDNQFRCSSGRCIPGHWACDGDNDC-GDFSDEAQTNCTREEIRSPAGCNGNEFQC 1034
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWL 309
CIP W CD E DC D +DE C + C + +CI W+
Sbjct: 1035 HPDGNCIPDLWRCDGEKDCE-----DGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWI 1089
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSN 368
CD ++DC D +DED ++ LC P + C + ++ C+ K C+G+ DC +
Sbjct: 1090 CDGDIDCE-----DQSDED-----DCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPD 1139
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSC 425
G DEG C ++ N CS+ CS P RG +C CP G NK C D C C
Sbjct: 1140 GSDEGELC-DECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIIDYCSNHLKC 1198
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1199 SQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1250
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 170/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2618 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2677
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2678 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 2732
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2733 -ATCAVDMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2790
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ +++ CDG DCS+ D
Sbjct: 2791 CIPKQFVCDHDDDCGDGSDESLQCGYRECTAEEFSCADGRCLLNTQWQCDGDFDCSDHSD 2850
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2851 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGSLCDNKDDCGDGSDERNCHINECLSKKVS 2910
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 2911 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 2969
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 2970 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3007
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 84/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DCS+G DEG C +C+ L C +KC+
Sbjct: 49 IKCPLNHIACLGTNKCVHLSQLCNGVMDCSDGYDEGLHCQELLPNCQLLNCQYKCAVVRN 108
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC I G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 109 STRCYCEDGFEVKEDGRSCRDHDECAIYGACSQTCINTHGSYACSCVEGYIMQPDNRSCK 168
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A N P D ++ +++ I +LNGS
Sbjct: 169 AKNEPTDRLPMLLIANSETIEVFYLNGS 196
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/371 (28%), Positives = 146/371 (39%), Gaps = 91/371 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3506 FWCDGDFDCADGS--DERNCEASCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKHCE 3562
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3563 PASPTCSSSEYICASRGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKAHCI 3620
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DED C G C + C H W+CD E
Sbjct: 3621 PIRWLCDGIHDC-----VDGSDED-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3670
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3671 DDCGDNSDEAPDMCAKFLCPPTRPHRCRNNRICLQPEQMCNGIDDCGDNSDEDHCGGKLT 3730
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNN 378
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3731 YKARPCKKDEFAC-SNKKCIPMDLQCDQLDDCGDGSDEQGCRITPAEYTCEDNVNP-CGD 3788
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3789 DAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINMEGSY 3839
Query: 437 VCSCTEGYTLR 447
C C + + R
Sbjct: 3840 KCVCDQNFQER 3850
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3291 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3349
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3350 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3403
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3404 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3453
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3454 EFQC-RNNNCIPDHWRCDSQNDCSDNSDE 3481
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C A C+ QF C G+CI WKCDG DC +
Sbjct: 3497 ANGDCVSSRFWCDGDFDCADGSDERN-CEASCSKDQFQCSNGQCISAKWKCDGHEDC-KY 3554
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S+ CI + C+ E DC+ D +DE D +C
Sbjct: 3555 GEDEKHCEPASPTCSSSEYICA-SRGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3607
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DED +C +E C +S
Sbjct: 3608 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDED---NCDRGGNICRADEFLCNNS- 3658
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3659 LCKLHFWVCDGEDDCGDNSDEAP 3681
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3369 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3428
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3429 VCDEDPDC-ADASDEANCDKKTCGPHEFQCR-NNNCIPDHWRCDSQNDCS-----DNSDE 3481
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3482 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEASCSK 3529
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3530 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 3558
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3331 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3389
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3390 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3443
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3444 NCDKKTCGPHEFQCR-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3492
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3493 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3520
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ SK CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2537 RCIPHSKLCDGENDCGDNSDELDCKVSTCAAVEFRCADGTCIPRSARCNQNIDC-ADASD 2595
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ +W+CD DC D D
Sbjct: 2596 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2653
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2654 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2701
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE----NLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE A C + + SH C P
Sbjct: 2702 -SAQKCISKHWICDGEDDCGDGLDESDSICGAATCAVDMFSCQGSHACVPRHWLCDGERD 2760
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2761 CPNGSDELSTAGCAPNNT 2778
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 125/338 (36%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 857 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQVDQFSCG-NGRCIP 915
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 916 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 975
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + Q +C+ S +CIP +W CD + DC D D + + + C+ NE
Sbjct: 976 CVHSCLDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQTNCTREEIRSPAGCNGNEF 1032
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE----GPF----------------CNNKA----- 380
+C C+ CDG+ DC +G DE G C NKA
Sbjct: 1033 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWICDG 1092
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P + C P + C D DEC L
Sbjct: 1093 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPDGSDEGELCDECSL 1152
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C ++
Sbjct: 1153 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIID 1190
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 99/230 (43%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH+ LCD E
Sbjct: 2489 EFECGNGECIDYQLTCDGTPHCKDKSDEKLLYCENRSCRRGFRPCYNRRCIPHSKLCDGE 2548
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2549 NDCG-----DNSDELDCKVSTCAAVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2602
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
+F V +RC S++ CV S CDG DC + DE LKC
Sbjct: 2603 DCTHFYKLGVKT-TGFIRCNSTSLCVLPSWICDGSNDCGDYSDE------------LKCP 2649
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2650 VQNKHKCEENYFG----CPSGRCILNTWVCDGQKDCEDGLDEFHCDSSCS 2695
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 625 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 684
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 685 WCDAYYDHIEKVFLNGTHRKIVYSGKEL 712
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 131/366 (35%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3097 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3156
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3157 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3208
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDGS 235
++G D N+ P+ K ++ L G
Sbjct: 3209 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGK 3268
Query: 236 DEPNTC-------------IHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
C + C Q +C + KCIP W CD DC
Sbjct: 3269 THTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3327
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3328 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3387
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ ++ N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3388 LRCNGQDDCG--------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3437
Query: 368 NGEDEG 373
+ DE
Sbjct: 3438 DASDEA 3443
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + V
Sbjct: 4026 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVVSISS 4085
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4086 KQGLLHPHRIDVFEDYIYGAGPKNGVFRVQKFGHG 4120
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1995 IGKARLDGSEKVILVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREVVLS 2054
Query: 166 HPN 168
N
Sbjct: 2055 GSN 2057
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ VE V G + +
Sbjct: 324 KVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQ 383
Query: 167 PNELR 171
++R
Sbjct: 384 GRQVR 388
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DCS+G DEG C N + Q+ C + +
Sbjct: 49 IKCPLNHIACLGTNKCVHLSQLCNGVMDCSDGYDEGLHCQELLPNCQLLNCQYKCAVVRN 108
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 109 STRCYCEDGF-EVKEDG 124
>gi|17512511|gb|AAH19207.1| Low density lipoprotein receptor [Mus musculus]
Length = 862
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|16506799|gb|AAL23955.1|AF425607_1 low density lipoprotein receptor [Mus musculus]
Length = 862
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|113195700|ref|NP_034830.2| low-density lipoprotein receptor isoform 1 precursor [Mus musculus]
gi|449081274|sp|P35951.2|LDLR_MOUSE RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|296202|emb|CAA45759.1| low density lipoprotein receptor precursor [Mus musculus]
gi|31419350|gb|AAH53041.1| Low density lipoprotein receptor [Mus musculus]
gi|148693265|gb|EDL25212.1| low density lipoprotein receptor, isoform CRA_b [Mus musculus]
Length = 862
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|157821815|ref|NP_001101313.1| low density lipoprotein-related protein 1B (deleted in tumors)
[Rattus norvegicus]
gi|149047875|gb|EDM00491.1| low density lipoprotein-related protein 1B (deleted in tumors)
(predicted) [Rattus norvegicus]
Length = 2922
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 118/354 (33%), Positives = 159/354 (44%), Gaps = 52/354 (14%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 1398 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 1457
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ KCI +W+CD E DC D +D +D
Sbjct: 1458 QKDC-EDGLDELH-CDSSCSWNQFACSV-HKCISKHWICDGEDDCG--DGLDESDNICGA 1512
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC S+ N D + + HN V
Sbjct: 1513 V-TCAADMFSCQSSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKV- 1570
Query: 340 CHPNEL--------------------RCGSS------NQCVALSKFCDGKPDCSNGEDEG 373
C P + C SS +C+ CD + DC +G DE
Sbjct: 1571 CIPKQFVCDHDDDCGDGSDEFLECEHSCNSSFFMCKNGRCIPRDGLCDNRDDCGDGSDEA 1630
Query: 374 PFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTC 429
N+ + + CS C P C C G ++ KT CVD DEC C Q C
Sbjct: 1631 KCHINECLSKKISGCSQDCQDLPISYKCKCWPGFQLKDDGKT-CVDIDECSTGFPCSQQC 1689
Query: 430 TNTHLSYVCSCTEGYTLRPDGK-SCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
NT+ +Y C CTEGY +PD + C +++ DE +I + +IR+I +GS
Sbjct: 1690 INTYGTYKCRCTEGYETQPDNQNGCRSLS---DEEPFLILADQHEIRKISTDGS 1740
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 147/368 (39%), Gaps = 91/368 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 2239 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEK--- 2292
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q QC
Sbjct: 2293 NCEPAFPVCSSSEYMCASGGCLSASLKCNGETDCV-DGSDEMD-CVTECKEDQFQCRNKA 2350
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLC 310
CIP WLCD DC VD +DE+ C G C + C H W+C
Sbjct: 2351 YCIPIRWLCDGIYDC-----VDGSDEE-----NCGRGGSICRADEFLCNNSLCKLHFWVC 2400
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNG 369
D E DC DN+DE D LC P RC + C+ L K C+G DC +
Sbjct: 2401 DGEDDCG-----DNSDEVPDMCVK---FLCPPTRPYRCRNDRICLQLEKMCNGINDCGDN 2452
Query: 370 EDE----GPF-------------CNNKA------------DCENLKCSHKCSPTPR---- 396
DE G CNN+ DC + C TP
Sbjct: 2453 SDEEHCSGTLSFKSEPCKKDEFTCNNRNCIPMELQCDGLDDCGDGSDEQGCMQTPTQHTC 2512
Query: 397 ------------------GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
C C G +N +C D +ECL+ G C Q C NT SY
Sbjct: 2513 ENNGNPCGDDAYCNQIRTSVFCRCKPGFQRNIKGRECADLNECLVFGICSQHCLNTRGSY 2572
Query: 437 VCSCTEGY 444
C C + +
Sbjct: 2573 KCVCDQNF 2580
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 2024 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 2082
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C +KKCIP N C+ + DC D DE
Sbjct: 2083 CDGENDC-GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCG-----DEEDER 2136
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 2137 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 2186
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 2187 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 2214
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 144/366 (39%), Gaps = 90/366 (24%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV K CDG DC +G DE + C+ +F C G CIP S +C+ +DC D SD
Sbjct: 1317 RCVPHGKLCDGTNDCGDGSDELDCKVSTCSTVEFRCTDGTCIPRSARCNQNMDC-SDASD 1375
Query: 237 EP---NT-CIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E NT C H G ++C + C+ +W+CD DC D D
Sbjct: 1376 EKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 1433
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSH---------- 335
H+C C S +CI + W+CD + DC D++ ++ W+++
Sbjct: 1434 HKCEENYFGCP-SGRCILNTWVCDGQKDCEDGLDELHCDSSCSWNQFACSVHKCISKHWI 1492
Query: 336 ------------------NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----- 372
AV C + C SS+ CV CDG+ DC +G DE
Sbjct: 1493 CDGEDDCGDGLDESDNICGAVTCAADMFSCQSSHACVPQHWLCDGERDCPDGSDELSSAG 1552
Query: 373 ----------GPFCNNKA-----------------DCENLKCSHKCSPTP---RGAMCFC 402
C+NK E L+C H C+ + + C
Sbjct: 1553 CAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDEFLECEHSCNSSFFMCKNGRCIP 1612
Query: 403 PAGQNPNKTQCVDA--------DECL---IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G N+ C D +ECL I G C Q C + +SY C C G+ L+ DGK
Sbjct: 1613 RDGLCDNRDDCGDGSDEAKCHINECLSKKISG-CSQDCQDLPISYKCKCWPGFQLKDDGK 1671
Query: 452 SCTAVN 457
+C ++
Sbjct: 1672 TCVDID 1677
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 2064 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLR 2122
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 2123 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 2176
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 2177 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLR 2225
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV+ +CDG+ DC++G DE
Sbjct: 2226 DFLC-SNGDCVSSRFWCDGEFDCADGSDE 2253
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 2102 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 2161
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 2162 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 2214
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 2215 ENCKPQTCTLRDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 2262
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 2263 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 2291
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 104/231 (45%), Gaps = 19/231 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ + CV CDG P C + DE N C G C +C+P CD
Sbjct: 1268 SEFECGNGD-CVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCD 1326
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC DGSDE + + C + +C CIP + C++ MDC S + +NTD
Sbjct: 1327 GTNDC-GDGSDELDCKVSTCSTVEFRCT-DGTCIPRSARCNQNMDCSDASDEKGCNNTDC 1384
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ +W+CD DC D +DE K N C
Sbjct: 1385 THFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 1437
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS-HKC 391
N C S +C+ + CDG+ DC +G DE C++ CS HKC
Sbjct: 1438 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE-LHCDSSCSWNQFACSVHKC 1486
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 106/265 (40%), Gaps = 47/265 (17%)
Query: 186 DGKPDCSNGEDEGPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
DG+ +CS D + C +F CG G C+ CDG C + ++
Sbjct: 1238 DGRVNCSCRGDRTLLASNRCVTKNSSCNIYSEFECGNGDCVDYVLTCDGIPHCKDKSDEK 1297
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C ++ + +++C+PH LCD DC D +DE K C + +C
Sbjct: 1298 LLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDCG-----DGSDELDCKVSTCSTVEFRC 1352
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQC 353
CIP + C++ MDCS D +DE + D + + +RC S++ C
Sbjct: 1353 T-DGTCIPRSARCNQNMDCS-----DASDEKGCNNTDCTHFYKLGVKSTGFIRCNSTSLC 1406
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSPTPRGAMCFCPAGQNPN 409
V S CDG DC + DE LKC HKC G CP+G+
Sbjct: 1407 VLPSWICDGSNDCGDYSDE------------LKCPVQNKHKCEENYFG----CPSGRCIL 1450
Query: 410 KTQCVDADECLIDG----SCDQTCT 430
T D + DG CD +C+
Sbjct: 1451 NTWVCDGQKDCEDGLDELHCDSSCS 1475
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 110/301 (36%), Gaps = 53/301 (17%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 1830 VLVSKRLKFPRDLSLDPRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 1889
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
Y LYW D N +E +DGSH + PN+ G +AL+ F D ++G+
Sbjct: 1890 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFED-YIYWTDGK 1940
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA-- 253
+ T G + SW + +P+ H C C+
Sbjct: 1941 TK-SLSRVHKTSGADRLSL----IYSWHAITDIQVYH-SYRQPDVSKHLCTVNNGGCSHL 1994
Query: 254 -LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
L H C + D+ C Q +C + KCIP W CD
Sbjct: 1995 CLLGPGKTHTCACPTNFYLAADNRT--------CLSNCTASQFRCK-TDKCIPFWWKCD- 2044
Query: 313 EMDCSTDDIVDNTDEDWD-KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DD D +DE D F C P +CG+ C + CDG+ DC + D
Sbjct: 2045 ----TVDDCGDGSDEPDDCPEFK-----CQPGRFQCGTG-LCALPAFICDGENDCGDNSD 2094
Query: 372 E 372
E
Sbjct: 2095 E 2095
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV K++Q P+ L +D+ + +YW D L+ + SV DGS V
Sbjct: 2759 IEEAAMDGTLRRILVQKHLQRPTGLTVDHFGERIYWADFELSIIGSVMYDGSSPVVSVSS 2818
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 2819 KQGLLHPHRIDVFEDYIYGAGPKNGIFRVQKFGHG 2853
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 62/138 (44%), Gaps = 11/138 (7%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKC 217
AV C + C SS+ CV CDG+ DC +G DE G N C F C C
Sbjct: 1512 AVTCAADMFSCQSSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKVC 1571
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
IP+ + D DGSDE C H C + C + +CIP + LCD DC
Sbjct: 1572 IPKQF-VCDHDDDCGDGSDEFLECEHSCNSSFFMCK-NGRCIPRDGLCDNRDDCG----- 1624
Query: 278 DNTDEDWDKFHQCFNGQV 295
D +DE ++C + ++
Sbjct: 1625 DGSDEAKCHINECLSKKI 1642
>gi|74213483|dbj|BAE35554.1| unnamed protein product [Mus musculus]
Length = 862
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|74212404|dbj|BAE30950.1| unnamed protein product [Mus musculus]
Length = 862
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|195504248|ref|XP_002098999.1| GE10671 [Drosophila yakuba]
gi|194185100|gb|EDW98711.1| GE10671 [Drosophila yakuba]
Length = 922
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 120/374 (32%), Positives = 160/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 107 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 165
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 166 KRWKCDHDDDCGDGTDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERS 224
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 225 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 279
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 280 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGVNQGGCNATSEFDCGG-G 335
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QC+A+SK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 336 QCIAISKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYQLS 395
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C+D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 396 PDKRNCLDINECDVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 451
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 452 LLARRHDIRKIALD 465
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 90/212 (42%), Gaps = 60/212 (28%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPH 261
A C+ QF CG G CIP W+CD DC DGSDE N C++ C N + +C +CIP
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCMNACPNNEFKCQTVDQCIPR 87
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDD 320
+WLCD DC D +DE + C + C + +C+P W+CD+ DCS
Sbjct: 88 SWLCDGSNDCR-----DKSDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCS--- 139
Query: 321 IVDNTDEDWDKYFSHN-AVLCHPNELRCG------------------------------- 348
D +DE HN C +E CG
Sbjct: 140 --DGSDE-------HNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGTDEKECPVVPC 190
Query: 349 --------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+G DE
Sbjct: 191 DSVAEHTCTNGACIAKRWVCDGDPDCSDGSDE 222
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 127/290 (43%), Gaps = 62/290 (21%)
Query: 141 LYWCDSHLNT-VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG- 198
L++ S L+T +S RV + A C ++ RCG+ N C+ CD + DC++G DE
Sbjct: 7 LFFVTSLLHTQSQSFRVLAINEAT-CSSDQFRCGNGN-CIPNKWRCDQESDCADGSDEAN 64
Query: 199 PFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK- 256
C C +F C + +CIP SW CDG DC D SDE + C + C +
Sbjct: 65 ELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDC-RDKSDEAHCRARTCSPDEYACKSGEG 123
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNG---------------- 293
+C+P W+CD+ DCS D +DE D+F C NG
Sbjct: 124 QCVPLAWMCDQSKDCS-----DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCG 177
Query: 294 ----QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ +C + + CI W+CD + DCS D +DE +
Sbjct: 178 DGTDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTT 232
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C +E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 233 TPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 277
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 588 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 647
Query: 167 PNEL 170
E
Sbjct: 648 SGEY 651
>gi|358030304|ref|NP_001239588.1| low-density lipoprotein receptor isoform 3 presursor precursor [Mus
musculus]
Length = 861
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 108 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 166
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 167 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 223
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 224 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 269
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 270 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 328
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 329 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 388
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 389 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 417
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 26 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 84
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 85 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 133
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 134 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 186
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 187 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 228
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 26 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 84
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 85 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 133
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 134 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 180
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 446 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 504
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 505 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 554
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 555 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 610
>gi|410968660|ref|XP_003990820.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Felis catus]
Length = 3453
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 123/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 868 CPDDQFKC-KNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQMDQFSCGNGRCIPRAW 926
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 927 LCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVH 986
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN-TDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ + +CIP +W CD + DC +D+ N T E+ C + QC
Sbjct: 987 SCFDNQFRCS-NGRCIPGHWACDGDNDCGDFSDEAQTNCTREEIRSPPGCNGNEFQCHPD 1045
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
CIP W CD E DC D
Sbjct: 1046 GNCIPDLWRCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWICDGDIDCE 1105
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+G+ DC +G DEG C+ +
Sbjct: 1106 DQSDED-----DCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPDGSDEGDLCD-ECS 1159
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G +K C D C C Q C + C
Sbjct: 1160 LNNGGCSNHCSVVPGRGIVCSCPEGLRLSKDNKTCEIIDYCSNHLKCSQVCEQHKHTVKC 1219
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1220 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1258
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPR 396
+ C N + C +N+C+ LS+ C+G DCS+G DEG C +C+ L C +KC+
Sbjct: 57 IKCPLNHIACLGANKCIHLSRLCNGVLDCSDGYDEGLHCQELLPNCQQLNCQYKCAVVRN 116
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC I G+C QTC NT+ SY CSC EGY ++PD +SC
Sbjct: 117 STRCYCEDGFEVKEDGRSCRDQDECAIYGACSQTCINTYGSYACSCVEGYIMQPDNRSCK 176
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A N P D P ++ +++ I +LNGS
Sbjct: 177 AKNEPTDRPPMLLIANSETIEVFYLNGS 204
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 161/400 (40%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2626 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 2685
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 2686 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGT 2740
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2741 -ATCATDMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 2799
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ E C ++ CDG DC + DE
Sbjct: 2800 IPKQFVCDHDDDCGDGSDESLQCAYRQCNVEEFSCADGRCLLSTQWQCDGDFDCPDHSDE 2859
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C++K DC +
Sbjct: 2860 APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDSKDDCGDGSDERNCHINECLSKKVSG 2919
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+G
Sbjct: 2920 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDVDECSLGFPCSQQCINTYGTYKCFCTDG 2978
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y ++PD C +++ DE +I + +IR+I +GS
Sbjct: 2979 YEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3015
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCI 259
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC +
Sbjct: 3295 CLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCAL 3353
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 3354 PA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-- 3405
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3406 ------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3451
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3299 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3357
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3358 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3411
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+ C QC +K CI W+CDE+ DC+
Sbjct: 3412 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA 3445
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2545 RCITHGKLCDGENDCGDNSDELDCKVSTCASVEFRCADGTCIPRSARCNQNIDC-ADASD 2603
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ +W+CD DC D D
Sbjct: 2604 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2661
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2662 HKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2709
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE----NLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE A C + + SH C P
Sbjct: 2710 -SAQKCISKHWICDGEDDCGDGLDESDSICGTATCATDMFSCQGSHACVPRHWLCDGERD 2768
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2769 CPNGSDELSTAGCAPNNT 2786
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 126/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 865 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCAARTCQMDQFSCG-NGRCIP 923
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 924 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 983
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ + +CIP +W CD + DC D D + + + C+ NE
Sbjct: 984 CVHSCFDNQFRCS-NGRCIPGHWACDGDNDCG--DFSDEAQTNCTREEIRSPPGCNGNEF 1040
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE----GPF----------------CNNKA----- 380
+C C+ CDG+ DC +G DE G C NKA
Sbjct: 1041 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCINKAWICDG 1100
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P + C P + C D DEC L
Sbjct: 1101 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSACLQPEKLCNGRRDCPDGSDEGDLCDECSL 1160
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C ++
Sbjct: 1161 NNGGCSNHCSVVPGRGIVCSCPEGLRLSKDNKTCEIID 1198
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 132/326 (40%), Gaps = 50/326 (15%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 633 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 692
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNELR----CGSSNQCVALSKFCDG---KPDCSNGE 195
WCD++ + +E V ++G+H ++ EL V + + +G + D E
Sbjct: 693 WCDAYYDHIEKVFLNGTHRKIVYSGKELNHPFGLSHHGNYVFWTDYMNGSIFQLDLVTNE 752
Query: 196 ------DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS-----------DEP 238
+ P + + G C + C + G +
Sbjct: 753 VTLLRHERPPLFGLQIYDPRKQQGDNMCRVNNGGCSTLCLAIPGGRVCACADNQLLDENG 812
Query: 239 NTCI--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
TCI H C G+ +C ++ CI W CD + DC D+ + H C
Sbjct: 813 TTCIFNSGEVLPHICKAGEFRCK-NRHCIQARWKCDGDDDCLDGSDEDSVNC---FNHSC 868
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+ Q +C + +CIP WLCD DC +++ N + A C ++ CG+
Sbjct: 869 PDDQFKCK-NNRCIPKRWLCDGANDCGSNEDESNQ--------TCAARTCQMDQFSCGNG 919
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFC 376
+C+ + CD + DC + DE C
Sbjct: 920 -RCIPRAWLCDREDDCGDQTDEMASC 944
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 133/332 (40%), Gaps = 75/332 (22%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3105 ILVSKKLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3164
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3165 YVNRRLYWADE--NHIEFSNMDGSHRHTV--PNQDIPG----VIALTLFEDYIYWTDGKT 3216
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDG- 234
++G D N+ P+ K ++ L G
Sbjct: 3217 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCMINNGGCSHLCLLAPGK 3276
Query: 235 ------------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ + TC+ C Q +C + KCIP W CD + DD D +DE
Sbjct: 3277 THTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDE 3330
Query: 283 --DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D +F +C G+ QC +P ++CD E DC DN+DE + + +C
Sbjct: 3331 PDDCPEF-KCQPGRFQCGTGLCALPA-FICDGENDCG-----DNSDE-----LNCDTHVC 3378
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C + +C+ ++ C+G+ DC + EDE
Sbjct: 3379 LSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDE 3410
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CI H LCD E
Sbjct: 2497 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCITHGKLCDGE 2556
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + + +CA CIP + C++ +DC+ N +
Sbjct: 2557 NDCG-----DNSDELDCKVSTCASVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2610
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
+F V +RC S++ CV S CDG DC + DE LKC
Sbjct: 2611 DCTHFYKLGVKT-TGFIRCNSTSLCVLPSWICDGSNDCGDYSDE------------LKCP 2657
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2658 VQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 2703
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2003 IGKARLDGSEKVILVSMGITWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2062
Query: 166 HPN 168
N
Sbjct: 2063 GSN 2065
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3377 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3436
Query: 223 KCDGFVDCLEDGSDEPN 239
CD DC D SDE N
Sbjct: 3437 VCDEDPDC-ADASDEAN 3452
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ VE V G + +
Sbjct: 332 KVERCDMDGLNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQ 391
Query: 167 PNELR 171
++R
Sbjct: 392 GRQVR 396
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C +N+C+ LS+ C+G DCS+G DEG C E P Q+ C + +
Sbjct: 57 IKCPLNHIACLGANKCIHLSRLCNGVLDCSDGYDEGLHCQ-ELLPNCQQLNCQYKCAVVR 115
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 116 NSTRCYCEDGF-EVKEDG 132
>gi|157131891|ref|XP_001662359.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108871366|gb|EAT35591.1| AAEL012251-PA, partial [Aedes aegypti]
Length = 774
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 155/335 (46%), Gaps = 44/335 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWK 223
C +E C ++ +C+ CD DC + DE C P QF+C CI W+
Sbjct: 3 CRSDEFTC-ANGRCIQKRWQCDRDDDCGDNSDEKGCQATTCDPLKQFACSENYCITSKWR 61
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD- 275
CDG DC DGSDE P T ++ C + + QC+ CI +W+CD E DC D
Sbjct: 62 CDGEPDC-PDGSDERGCTNPTPPT-VNPCLSLEYQCSDRITCIHKSWICDGEKDCPQGDD 119
Query: 276 ----IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWD 330
I N C Q QC K CI ++ C+ + +CS D +DE D +
Sbjct: 120 EMPPICQNV--------TCRPDQFQCKKDKTCINGHFHCNGKPECS-----DGSDEVDCE 166
Query: 331 KYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC 387
+ AV C+P E CG C+ LSK CD KPDC +DE K +C N C
Sbjct: 167 R----PAVKCNPKTEFDCGGG-MCIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGC 221
Query: 388 SHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
SH C TP G C C P + N C D DEC GSC Q CTN ++ C C GY
Sbjct: 222 SHLCVDTPAGFYCDCKPGYKLVNNRTCEDIDECAEAGSCSQKCTNEIGTFKCECMPGYLR 281
Query: 447 RP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P D C A + AS++F+ DIR+I L+
Sbjct: 282 DPRDHTKCKAT----EGHASLLFARRHDIRKISLD 312
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----------- 106
LA+++ + + I++ + + +L DL P LD
Sbjct: 373 LAVDWIYNHIYFTDIKKATIELTNFD-GNMGKILIKDDLEIPRAIALDPIDGWMYWTDWG 431
Query: 107 ---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+AGM G +R +VT ++WP+ + +D + +YW D+ LNT+ S DGS V
Sbjct: 432 TTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTV 491
Query: 164 LCH 166
+ +
Sbjct: 492 VLY 494
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCGMGKCIP 219
V C P++ +C C+ C+GKP+CS+G DE +C P +F CG G CIP
Sbjct: 128 VTCRPDQFQCKKDKTCINGHFHCNGKPECSDGSDEVDCERPAVKCNPKTEFDCGGGMCIP 187
Query: 220 ESWKCDGFVDCLEDGSDEPN 239
S CD DC E DEPN
Sbjct: 188 LSKVCDKKPDCPE-FQDEPN 206
>gi|334326347|ref|XP_001364957.2| PREDICTED: low-density lipoprotein receptor [Monodelphis domestica]
Length = 860
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 163/365 (44%), Gaps = 57/365 (15%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C P E CG N+C+ L+ CD + DC NG DE C+ QF C GKCI +
Sbjct: 69 SVTCKPEEFSCGGRVNRCIPLTWKCDSQTDCENGSDEQDCPLKTCSHDQFRCHDGKCISQ 128
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVD 278
+ CD DC DGSDE + C QC S +CIP W+CD + DC +D+ D
Sbjct: 129 EFVCDADRDC-NDGSDELDCPDPTCNPATFQCN-STQCIPKLWVCDGDQDCEDGSDEWPD 186
Query: 279 NTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
E K C + + C S +CI +W CD DC D +DE+
Sbjct: 187 KCGEQDLVKKPKPCSSLEFHCG-SGECIHMSWRCDGGHDCK-----DKSDEEGCVKATCR 240
Query: 330 ----------------------------DKYFSHNAVLCH-PNELRCGSSNQCVALSKFC 360
D+ N LC PN+ +C S +C+++ K C
Sbjct: 241 PDEFQCNDGECVHGSRQCNKEYDCKDMSDEIGCVNVTLCEGPNKFKC-HSGECISMDKVC 299
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+G DC + DE +C N K CSH C+ G C CP G + ++ +C D D
Sbjct: 300 NGPRDCRDWSDEPIKECGTNECLNNKGGCSHICNDLKIGYECLCPEGFRLIDQKRCEDID 359
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC +C Q C N SY C C EGY + P K+C A+ A + F++ ++R++
Sbjct: 360 ECQNPDTCSQFCVNLPGSYKCECYEGYQIDPITKTCKAIGT----IAYLFFTNRHEVRKM 415
Query: 478 HLNGS 482
L+ S
Sbjct: 416 TLDRS 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 152/360 (42%), Gaps = 75/360 (20%)
Query: 154 VRVDGSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQF 210
+ + + NAV C NE +C +C++ CDG P+C +G DE + C P +F
Sbjct: 19 LTLSTATNAVDTCGRNEFQC-QDGKCISYKWVCDGSPECKDGSDETMETCLSVTCKPEEF 77
Query: 211 SCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
SCG + +CIP +WKCD DC E+GSDE + + C + Q +C KCI ++CD +
Sbjct: 78 SCGGRVNRCIPLTWKCDSQTDC-ENGSDEQDCPLKTCSHDQFRCH-DGKCISQEFVCDAD 135
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC+ D +DE C QC S +CIP W+CD + DC D +DE
Sbjct: 136 RDCN-----DGSDELDCPDPTCNPATFQCN-STQCIPKLWVCDGDQDCE-----DGSDEW 184
Query: 329 WDKYFSHNAVL----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------ 372
DK + V C E CG S +C+ +S CDG DC + DE
Sbjct: 185 PDKCGEQDLVKKPKPCSSLEFHCG-SGECIHMSWRCDGGHDCKDKSDEEGCVKATCRPDE 243
Query: 373 -----------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD---- 417
CN + DC+++ C +C P + +C+ D
Sbjct: 244 FQCNDGECVHGSRQCNKEYDCKDMSDEIGCVNV---TLCEGPNKFKCHSGECISMDKVCN 300
Query: 418 -------------------ECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
ECL + G C C + + Y C C EG+ L D K C ++
Sbjct: 301 GPRDCRDWSDEPIKECGTNECLNNKGGCSHICNDLKIGYECLCPEGFRLI-DQKRCEDID 359
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 22/145 (15%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--N 92
D DW + Y+ + GT ++A + ++L +Q+ + ++ +
Sbjct: 480 DGIAVDWIHGNLYWTDSVLGTISVANTKGSKRKTL--FKQEGAKPRAIVVDPVHGFMYWT 537
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
W PA ++ K G++G + LVT+ I+WP+ + +D + D LYW DS L+++
Sbjct: 538 DWGTPA--------KIGKGGLNGVDSFSLVTEAIEWPNGITLDLSSDRLYWVDSKLHSIS 589
Query: 153 SVRVDGSHNAV-------LCHPNEL 170
SV V+G + + L HP L
Sbjct: 590 SVDVNGGNRRIVLEDKNKLAHPFSL 614
>gi|403302460|ref|XP_003941876.1| PREDICTED: low-density lipoprotein receptor [Saimiri boliviensis
boliviensis]
Length = 621
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 115/333 (34%), Positives = 155/333 (46%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD +PDC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISQQFLCDSEPDCLDGSDEVSCPAVTCGPASFRCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC-----IHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCST 273
D DC EDGSDE P C + Q NG + QC S +CI W CD + DC
Sbjct: 168 DNDPDC-EDGSDEWPEHCGALLDVSQQNNGPCSAFEFQCR-SGECIHSGWHCDGDPDCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QC+ +CI + CD+E DC D +DE
Sbjct: 225 ----DKSDEENCTVATCRPDEFQCS-DGECIHGSRQCDQENDCK-----DMSDE----VG 270
Query: 334 SHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH
Sbjct: 271 CVNVTLCEGPNKFKC-HSGECITLDKVCNSARDCRDWSDEPLKECGTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 CNDLKIGHECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A +IF++ ++R++ L+ S
Sbjct: 390 TKACKAVG----SIAYLIFTNRHEVRKMTLDRS 418
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 103/219 (47%), Gaps = 27/219 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG+P+C +G DE + C FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGRPECQDGSDESQETCLSVSCRSEDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE C + +C KCI +LCD E DC +D +
Sbjct: 86 FWRCDGQVDC-ENGSDEQGCLPKTCSQDEFRCH-DGKCISQQFLCDSEPDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-------F 333
DE C +C S CIP W CD + DC D +DE W ++
Sbjct: 139 DEVSCPAVTCGPASFRCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPEHCGALLDVS 191
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C E +C S +C+ CDG PDC + DE
Sbjct: 192 QQNNGPCSAFEFQC-RSGECIHSGWHCDGDPDCKDKSDE 229
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGRPEC-QDGSDESQETCLSVSCRSEDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI +LCD E DC
Sbjct: 85 QFWRCDGQVDCE-----NGSDEQGCLPKTCSQDEFRCH-DGKCISQQFLCDSEPDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S AV C P RC SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----VSCPAVTCGPASFRCNSST-CIPQLWACDNDPDCEDGSDEWP 181
>gi|33356181|gb|AAQ16410.1| lipophorin receptor [Aedes aegypti]
gi|374094912|gb|AEY84776.1| lipophorin receptor [Aedes aegypti]
Length = 891
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 155/335 (46%), Gaps = 44/335 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWK 223
C +E C ++ +C+ CD DC + DE C P QF+C CI W+
Sbjct: 120 CRSDEFTC-ANGRCIQKRWQCDRDDDCGDNSDEKGCQATTCDPLKQFACSENYCITSKWR 178
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD- 275
CDG DC DGSDE P T ++ C + + QC+ CI +W+CD E DC D
Sbjct: 179 CDGEPDC-PDGSDERGCTNPTPPT-VNPCLSLEYQCSDRITCIHKSWICDGEKDCPQGDD 236
Query: 276 ----IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWD 330
I N C Q QC K CI ++ C+ + +CS D +DE D +
Sbjct: 237 EMPPICQNV--------TCRPDQFQCKKDKTCINGHFHCNGKPECS-----DGSDEVDCE 283
Query: 331 KYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC 387
+ AV C+P E CG C+ LSK CD KPDC +DE K +C N C
Sbjct: 284 R----PAVKCNPKTEFDCGGG-MCIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGC 338
Query: 388 SHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
SH C TP G C C P + N C D DEC GSC Q CTN ++ C C GY
Sbjct: 339 SHLCVDTPAGFYCDCKPGYKLVNNRTCEDIDECAEAGSCSQKCTNEIGTFKCECMPGYLR 398
Query: 447 RP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P D C A + AS++F+ DIR+I L+
Sbjct: 399 DPRDHTKCKAT----EGHASLLFARRHDIRKISLD 429
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/173 (35%), Positives = 84/173 (48%), Gaps = 25/173 (14%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPH 261
C+ +F C G+CIP+ W+CDG DC DGSDE + C + + C + + CIP
Sbjct: 39 CSDDKFRCKSGRCIPKHWQCDGENDC-SDGSDEDSEKCQSKVCSSEEFTCRSGTGTCIPL 97
Query: 262 NWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
W+CD+ DC +D++ N D+F C NG +CI W CD + DC
Sbjct: 98 AWMCDQNRDCPDGSDEMSCNETCRSDEF-TCANG--------RCIQKRWQCDRDDDCG-- 146
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE A C P + S N C+ CDG+PDC +G DE
Sbjct: 147 ---DNSDEK-----GCQATTCDPLKQFACSENYCITSKWRCDGEPDCPDGSDE 191
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----------- 106
LA+++ + + I++ + + +L DL P LD
Sbjct: 490 LAVDWIYNHIYFTDIKKATIELTNFD-GNMGKILIKDDLEIPRAIALDPIDGWMYWTDWG 548
Query: 107 ---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+AGM G +R +VT ++WP+ + +D + +YW D+ LNT+ S DGS V
Sbjct: 549 TTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTV 608
Query: 164 LCH 166
+ +
Sbjct: 609 VLY 611
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCGMGKCIP 219
V C P++ +C C+ C+GKP+CS+G DE +C P +F CG G CIP
Sbjct: 245 VTCRPDQFQCKKDKTCINGHFHCNGKPECSDGSDEVDCERPAVKCNPKTEFDCGGGMCIP 304
Query: 220 ESWKCDGFVDCLEDGSDEPN 239
S CD DC E DEPN
Sbjct: 305 LSKVCDKKPDCPE-FQDEPN 323
>gi|348533802|ref|XP_003454393.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Oreochromis niloticus]
Length = 1938
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 111/327 (33%), Positives = 159/327 (48%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC + C+A +CDG DC +G DE A C+ +F C G+CI +
Sbjct: 151 CSDKEFRC-TDGSCIAEHWYCDGDTDCKDGSDEENCPSDVMTATCSVEEFQCAYGRCILD 209
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C + + C+ S CI W CD E DC D
Sbjct: 210 IYHCD-GDDDCGDWSDESDCSSHQPCRSVEFMCS-SGMCINAAWRCDGEHDCD-----DR 262
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C + +C+ +W CD E DCS D +DE+ + ++
Sbjct: 263 SDEKNCTTSMCTADQFRCG-TGRCVRLSWRCDGEDDCS-----DRSDEEGCE--KTDSPP 314
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-----CNNKADCE--NLKCSHKCS 392
C P++ +CG+ +C+ L K C+ DC +G DE P +N+ +C N CS KC
Sbjct: 315 CAPDQFQCGNG-RCIGLRKVCNEVNDCGDGTDEHPHHDCRPRSNEGNCNQNNGGCSQKCQ 373
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D DEC +G C Q CTNT + C C +GY LRPD
Sbjct: 374 MVRGLVQCTCHTGYRLMDDGKTCQDVDECAEEGYCSQGCTNTEGGFQCWCVQGYELRPDK 433
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 434 RSCKALG---PEPV-LLFANRIDIRQV 456
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 75/168 (44%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 30 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRR 89
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + C + CI W CD + DC DN+
Sbjct: 90 SWVCDGDNDC-EDDSDEQDCPPRECEEDEFHCQ-NGYCIRSLWHCDGDNDCG-----DNS 142
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + + +C CI +W CD + DC D +DE+
Sbjct: 143 DEQCD-MRKCSDKEFRCT-DGSCIAEHWYCDGDTDCK-----DGSDEE 183
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E DGS VL
Sbjct: 886 KIERAGMDASNRIVIISSNLTWPNGLAIDYETKRLYWADAGMKTIEYGNFDGSDRQVL 943
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 16/151 (10%)
Query: 33 TDDIVDNTDED---WDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIND 89
T D++ T+ D + + L T LA+++ RN + + RL
Sbjct: 1408 TLDVIRRTNLDGSGMETVISQGLKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTSRKV 1467
Query: 90 LLN-SWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDY 136
L+N S D P A +FP ++E++ + G +R L+ ++ WP+ L +DY
Sbjct: 1468 LVNNSLDEPRAIAVFPSKGFLFWTDWGHIAKIERSHLDGSDRKVLINTDLGWPNGLTLDY 1527
Query: 137 NQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++W D+HL+ +ES ++G VL P
Sbjct: 1528 DTRRIFWVDAHLDRIESSDLNGKLRQVLVSP 1558
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ KA ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 493 DRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLI 552
Query: 166 HPN 168
N
Sbjct: 553 WQN 555
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++ M G +R L++ N+ WP+ L ID L W D+H +E+ ++G + L
Sbjct: 1194 KLERSAMDGSDRVVLISNNLGWPNGLAIDMAGSQLLWADAHTERIEASDLNGQNRRTLVT 1253
Query: 167 P 167
P
Sbjct: 1254 P 1254
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 581 RIEYSNMDGSNRRVIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERADLDGRNRKAV 638
>gi|62088576|dbj|BAD92735.1| low density lipoprotein-related protein 1 variant [Homo sapiens]
Length = 2359
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 111/338 (32%), Positives = 162/338 (47%), Gaps = 28/338 (8%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 542 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 600
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 601 HVCVPERWLCDGDKDCA-DGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 658
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 328
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 659 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDEAP 708
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-C 387
+ + + C+ + SS +CVA + C+G+ DC + DE N+ L C
Sbjct: 709 KNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLSRKLSGC 768
Query: 388 SHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
S C G C C G + C D DEC C Q C NTH SY C C EGY
Sbjct: 769 SQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCLCVEGYA 828
Query: 446 LR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
R D SC AV DE +IF++ +R+++L+GS
Sbjct: 829 PRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 863
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 151/368 (41%), Gaps = 86/368 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 1352 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 1410
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 1411 DGDHDCA-DGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 1461
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 1462 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 1509
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 1510 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQR 1569
Query: 387 C---------------------------------------SHKCSPTPRGAMCFCPAGQN 407
C +C T + A C C +G +
Sbjct: 1570 CLSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGFH 1629
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVPQ 460
P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 1630 TVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIAD 1689
Query: 461 DEPASIIF 468
D +F
Sbjct: 1690 DNEIRSLF 1697
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 108/217 (49%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 1142 DGRTCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 1200
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 1201 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 1256
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 1257 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 1305
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 1306 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 1342
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 390 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 448
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 449 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 506
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 507 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 554
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 555 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 589
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 1840 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 1896
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 986 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 1042
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 174 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 230
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 345 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCN- 402
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 403 ----GADDCGDGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 457
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 458 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 501
>gi|410918333|ref|XP_003972640.1| PREDICTED: low-density lipoprotein receptor 1-like [Takifugu
rubripes]
Length = 834
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 115/337 (34%), Positives = 157/337 (46%), Gaps = 39/337 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A C NE +C ++ CV+ S CD DCS+G DE C+ F C C+P
Sbjct: 88 TAKECKDNEFQC-ANGHCVSASFVCDKDDDCSDGSDEASCPKPTCSGRSFQCNNSVCVPA 146
Query: 221 SWKCDGFVDCLEDGSDE-PNTC-------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
W+CDG DC DGSDE P C +C + QCA +CI +W CD DC
Sbjct: 147 QWRCDGDSDC-ADGSDEWPQNCDGRQKKPASRCSRHEFQCA-DGECIHGSWRCDGGTDCK 204
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE +C Q QC CI CD + DCS D +DE
Sbjct: 205 -----DRSDEVNCSRSRCPGDQFQC-FDGTCIAGTLQCDGKHDCS-----DLSDE----L 249
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSH 389
H A C P +C ++ +C+++ K C+ + DC + DE ++ +C+ N CSH
Sbjct: 250 GCHIARACEGPAMFKC-NTGECISMEKVCNKQRDCVDNSDEPDEECDRNECQTNNGGCSH 308
Query: 390 KCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
CS G C CPAG + +K C D DEC +C Q C N SY C C GY +
Sbjct: 309 YCSDLKLGFNCSCPAGYSLKMDKKTCEDIDECAEPDTCSQVCINLVGSYKCDCMGGYQID 368
Query: 448 PDGKSCTAVN--VPQDEPASIIFSSTVDIRRIHLNGS 482
P K+C A + VP + F++ D+RR+ L+ S
Sbjct: 369 PLTKTCKAQSGVVPM-----LYFTNKHDVRRMTLDRS 400
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 148/349 (42%), Gaps = 66/349 (18%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNAECTPGQFSCG--MG 215
H A +C + +CG+ +C+ CDG DC +G DE + C P +++CG +
Sbjct: 5 HAAFICSSTQFKCGN-GRCITSRWICDGTDDCGDGTDELQETCASKTCLPSEYNCGAPLN 63
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+CIP W CD DC + +DE N +C + + QCA + C+ +++CD++ DCS
Sbjct: 64 QCIPGGWHCDDKADCGNE-ADERNCTAKECKDNEFQCA-NGHCVSASFVCDKDDDCS--- 118
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C QC S C+P W CD + DC+ D D ++ D
Sbjct: 119 --DGSDEASCPKPTCSGRSFQCNNS-VCVPAQWRCDGDSDCA--DGSDEWPQNCDGRQKK 173
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------------G 373
A C +E +C + +C+ S CDG DC + DE G
Sbjct: 174 PASRCSRHEFQC-ADGECIHGSWRCDGGTDCKDRSDEVNCSRSRCPGDQFQCFDGTCIAG 232
Query: 374 PF-CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCV------------------ 414
C+ K DC +L C C PA N +C+
Sbjct: 233 TLQCDGKHDCSDLSDELGCH---IARACEGPAMFKCNTGECISMEKVCNKQRDCVDNSDE 289
Query: 415 -----DADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
D +EC +G C C++ L + CSC GY+L+ D K+C ++
Sbjct: 290 PDEECDRNECQTNNGGCSHYCSDLKLGFNCSCPAGYSLKMDKKTCEDID 338
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS--HNAV- 163
++EK G++G +R LVT NI WP+ + +D + LYW DS L+T+ S+ V+G H+ +
Sbjct: 524 KIEKCGLNGMDRIALVTDNIVWPNGITLDVSNHRLYWVDSKLHTLSSIDVNGGTRHSVLF 583
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 584 SEEHLSHPISL 594
>gi|296204867|ref|XP_002749514.1| PREDICTED: low-density lipoprotein receptor-related protein 1B
[Callithrix jacchus]
Length = 4630
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 137/294 (46%), Gaps = 33/294 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCA 253
C C QF C G+CIP W CDG DC + + C + C + QC
Sbjct: 1034 CGHSCFDNQFRCSSGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCH 1093
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWLC 310
CIP W CD E DC D +DE C + C + +CI W+C
Sbjct: 1094 PDGNCIPDLWRCDGEKDCE-----DGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVC 1148
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNG 369
D ++DC D +DED ++ LC P + C + ++ C+ K C+GK DC++G
Sbjct: 1149 DGDIDCE-----DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCADG 1198
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCD 426
DEG C ++ N CS+ CS P RG +C CP G NK C D C C
Sbjct: 1199 SDEGDLC-DECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCS 1257
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1258 QVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1308
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 107 IKCPLNHIACLGTNKCVHLSQLCNGVFDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 166
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTCTNTH SY CSC EGY ++PD +SC
Sbjct: 167 STRCYCEDGFEIKEDGRSCKDQDECAVYGTCSQTCTNTHGSYTCSCVEGYLMQPDNRSCK 226
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ + I HLNGS
Sbjct: 227 AKIEPTDRPPILLIKNFETIEVFHLNGS 254
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 120/400 (30%), Positives = 158/400 (39%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2676 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 2735
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D D
Sbjct: 2736 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDENDSICGA 2790
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 2791 V-TCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 2849
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E RC + CDG DC + DE
Sbjct: 2850 IPKQFVCDRDDDCGDGSDESPQCGYRQCGTEEFRCADGRCLLNTQWQCDGDFDCPDHSDE 2909
Query: 373 GPF-----------------------------CNNKADCENLK----------------- 386
P CNN+ DC +
Sbjct: 2910 APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNEDDCGDGSDERNCHINECLSKKVSG 2969
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+G
Sbjct: 2970 CSQDCQDLPISYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDG 3028
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y ++PD C +++ DE +I + +IR+I +GS
Sbjct: 3029 YEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3065
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/370 (28%), Positives = 148/370 (40%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 3564 FWCDGDFDCADGS--DERNCEMSCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3620
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G C+ S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3621 PASPTCSSSEYICASGGCMSASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3678
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3679 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3728
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3729 DDCGDNSDEAPDMCVKFLCPPTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCSGKLT 3788
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ ++ CD DC +G DE P C +
Sbjct: 3789 YKARPCKKDEFAC-SNKKCIPMNLQCDRLDDCGDGSDEQGCRIAPTDYTCEDNVNPCGDD 3847
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N +C D +ECL+ G+C C N SY
Sbjct: 3848 AYCNQIKTS---------VFCRCKPGFQRNMKNRKCEDLNECLVFGTCSHQCINVEGSYK 3898
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3899 CECDQNFQER 3908
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3349 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3407
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3408 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDEK 3461
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3462 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3511
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3512 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3539
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 3555 ANGDCVSSRFWCDGDFDCADGSDERN-CEMSCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 3612
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S C+ + C+ E DC+ D +DE D +C
Sbjct: 3613 GEDEKSCEPASPTCSSSEYICA-SGGCMSASLKCNGEYDCA-----DGSDE-MDCVTECK 3665
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3666 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3716
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3717 LCKLHFWVCDGEDDCGDNSDEAP 3739
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3389 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3447
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3448 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3501
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3502 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3550
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3551 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3578
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3427 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 3486
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3487 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3539
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + + C
Sbjct: 3540 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEMSCSK 3587
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 3588 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 3616
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3468 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3527
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3528 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3579
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CIP W CD DC ED +K + C +E
Sbjct: 3580 NCEMSCSKDQFQCS-NGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 3630
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3631 YICASGG-CMSASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 3684
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 126/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 915 NHSCPDDQFKCQNNRCIPKRWLCDGTNDCGGNEDESNQTCTARTCQVDQFSCG-NGRCIP 973
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 974 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1033
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K + C+ NE
Sbjct: 1034 CGHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEF 1090
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C C+ CDG+ DC +G DE C NKA
Sbjct: 1091 QCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1150
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1151 DIDCEDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCADGSDEGDLCDECSL 1210
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1211 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1248
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ L K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2595 RCIPLGKLCDGENDCGDNSDELDCKVSTCATVEFRCVDGTCIPRSARCNQNIDC-ADASD 2653
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2654 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2711
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2712 HKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 2759
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 2760 -SAQKCISKHWICDGEDDCGDGLDENDSICGAVTCAADMFSCQGSHACVPRHWLCDGERD 2818
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2819 CPNGSDELSTAGCAPNNT 2836
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 127/334 (38%), Gaps = 87/334 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3187 IGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSHRHKV--P 3242
Query: 168 NELRCGSSNQCVALSKF------CDGKPDC------SNGEDEGPFCNAECTPGQFSCGMG 215
N+ G +AL+ F DGK ++G + N+
Sbjct: 3243 NQDIPG----VIALTLFEDYIYWTDGKTKSLSRAHKTSGANRFSLINSWHAITDIQVYHS 3298
Query: 216 KCIPESWKCDGFVD--------CLEDG-------------SDEPNTCIHQCFNGQVQCAL 254
P+ +K ++ L G + + TC+ C Q +C
Sbjct: 3299 YRQPDVFKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRTCLSNCTASQFRCK- 3357
Query: 255 SKKCIPHNWLCDEEMDC-----------------------------------STDDIVDN 279
+ KCIP W CD DC +D DN
Sbjct: 3358 TDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDN 3417
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H C +GQ +C ++KCIP N C+ + DC DE+ +K N+
Sbjct: 3418 SDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG--------DEEDEKDCPENS-- 3467
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P+ +C ++ C++ CD PDC++ DE
Sbjct: 3468 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 3501
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT N+ WP+ L +D++ + LY
Sbjct: 683 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSNMLWPNGLTLDFHTNTLY 742
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 743 WCDAYYDHIEKVFLNGTHRKIVYSGREL 770
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 99/231 (42%), Gaps = 33/231 (14%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G+C+ CDG C + ++ C ++ C G C +++CIP LCD
Sbjct: 2547 EFECGNGECVDYQLTCDGIPHCKDKSDEKLLYCENRNCRRGFKPC-YNRRCIPLGKLCDG 2605
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E DC DN+DE K C + +C + CIP + C++ +DC+ N +
Sbjct: 2606 ENDCG-----DNSDELDCKVSTCATVEFRC-VDGTCIPRSARCNQNIDCADASDEKNCNN 2659
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+F V +RC S++ CV + CDG DC + DE LKC
Sbjct: 2660 TDCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE------------LKC 2706
Query: 388 ----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2707 PVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 2753
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KNIQ P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4084 IEEAAMDGTLRRILVQKNIQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4143
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4144 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4178
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ N
Sbjct: 2053 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGN 2106
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 115/314 (36%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2376 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2435
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2436 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2495
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C +G V+C G E N C+ + + +C + +
Sbjct: 2496 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECG-NGE 2554
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
C+ + CD C D +DE + + C G C +++CIP LCD E D
Sbjct: 2555 CVDYQLTCDGIPHCK-----DKSDEKLLYCENRNCRRGFKPC-YNRRCIPLGKLCDGEND 2608
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC C+ S C+ DC++ DE
Sbjct: 2609 CG-----DNSDE-----LDCKVSTCATVEFRC-VDGTCIPRSARCNQNIDCADASDE--- 2654
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2655 ----KNCNNTDCTH 2664
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 382 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRYTIIQ 441
Query: 167 PNELR 171
++R
Sbjct: 442 GRQVR 446
>gi|148703513|gb|EDL35460.1| mCG140833 [Mus musculus]
Length = 804
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 147/346 (42%), Gaps = 70/346 (20%)
Query: 164 LCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-----GKC 217
+CH P +C ++C+ CDG CS+G DE +C C M +C
Sbjct: 207 ICHQPGVFQCLDGSRCIEERYHCDGAQHCSDGSDE-----LDCWRPADDCSMRCDNKTRC 261
Query: 218 IPESWKCDGFVDCL----EDGSDEPNTCIH------------------------------ 243
IP+SW+CDG DCL E G N +
Sbjct: 262 IPKSWRCDGKPDCLDRRDEQGCSPLNFNVRMANAYLLLCVVMGTETAWTIQMRKAALSPG 321
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCAL 299
QC G+++C S +C+ W+CD ++DC D TDE K C Q C
Sbjct: 322 SLQCPEGEMKCPKSGECVLAEWICDHDVDCK-----DGTDEKDCGLKVISCGPRQWACDS 376
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+C+P W CD + DC D +DE C +E +C ++ C++ S
Sbjct: 377 GDQCVPDFWHCDGQRDCR-----DGSDE-----AGCAPQKCQDSEFQC-ATGACLSFSMV 425
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDAD 417
CDG+ DC +G DEG C++ C C H C +P G +C C G N C D +
Sbjct: 426 CDGREDCVDGSDEGGECSSSV-CSPGLCYHSCYQSPTGPVCVCAPGFELESNGQICQDVN 484
Query: 418 ECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
EC C QTC NT SY+C+C GY L PDG +C A + D
Sbjct: 485 ECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGIKPD 530
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 105/245 (42%), Gaps = 30/245 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++RC QC+ + CD + C +G + + C GQ+ C CI +SW+C
Sbjct: 45 CPDYKIRCPGKAQCLDAGEPCDAQQSCEDGSIKAHCPHIRCLAGQWQCQNRACIMDSWRC 104
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG C D SDE + C G V C S KCIP + +CD DC+ D DE
Sbjct: 105 DGIDHC-GDASDERD--CASCPEGTVSCD-SGKCIPESLMCDGRADCT-----DGADEPR 155
Query: 285 DKFHQ--------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
C V C K CIP LC+ E DC D +DE +
Sbjct: 156 TCVPTTPSLPPVLCARSSVPCQDGKGCIPRESLCNGEADCQ-----DGSDE------KNC 204
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
+CH P +C ++C+ CDG CS+G DE C AD +++C +K P
Sbjct: 205 FQICHQPGVFQCLDGSRCIEERYHCDGAQHCSDGSDE-LDCWRPADDCSMRCDNKTRCIP 263
Query: 396 RGAMC 400
+ C
Sbjct: 264 KSWRC 268
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 68/136 (50%), Gaps = 10/136 (7%)
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTP 207
T++ + S ++ C E++C S +CV CD DC +G DE C P
Sbjct: 310 TIQMRKAALSPGSLQCPEGEMKCPKSGECVLAEWICDHDVDCKDGTDEKDCGLKVISCGP 369
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
Q++C G +C+P+ W CDG DC DGSDE +C + + QCA + C+ + +CD
Sbjct: 370 RQWACDSGDQCVPDFWHCDGQRDC-RDGSDEAGCAPQKCQDSEFQCA-TGACLSFSMVCD 427
Query: 267 EEMDCSTDDIVDNTDE 282
DC VD +DE
Sbjct: 428 GREDC-----VDGSDE 438
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 101/241 (41%), Gaps = 38/241 (15%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+ C G+CIP SW CDG DCL DGSDE N + C + +++C +C+ CD +
Sbjct: 10 WQCDNGRCIPASWLCDGASDCL-DGSDEVNCESLTACPDYKIRCPGKAQCLDAGEPCDAQ 68
Query: 269 MDCSTDDIVDNTDEDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
C I K H +C GQ QC ++ CI +W CD D D
Sbjct: 69 QSCEDGSI---------KAHCPHIRCLAGQWQCQ-NRACIMDSWRCD-----GIDHCGDA 113
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NNKADCE 383
+DE + C + C S +C+ S CDG+ DC++G DE C
Sbjct: 114 SDE-------RDCASCPEGTVSC-DSGKCIPESLMCDGRADCTDGADEPRTCVPTTPSLP 165
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNT-HLSYVCSCTE 442
+ C+ P G C P ++ C +C DGS ++ C H V C +
Sbjct: 166 PVLCARSSVPCQDGKGCI------PRESLCNGEADCQ-DGSDEKNCFQICHQPGVFQCLD 218
Query: 443 G 443
G
Sbjct: 219 G 219
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 94/251 (37%), Gaps = 58/251 (23%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL 69
++C +CIP +W CD + DC +D DE G L N L
Sbjct: 253 MRCDNKTRCIPKSWRCDGKPDC-----LDRRDE----------QGCSPLNFNVRMANAYL 297
Query: 70 CF---IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI 126
+ + ++++R A L+ L PE GE + P + +
Sbjct: 298 LLCVVMGTETAWTIQMRKAA----LSPGSLQCPE--------------GEMKCPKSGECV 339
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD 186
+ + D++ D D D + C P + C S +QCV CD
Sbjct: 340 L--AEWICDHDVDCKDGTDEK---------DCGLKVISCGPRQWACDSGDQCVPDFWHCD 388
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--------- 237
G+ DC +G DE +C +F C G C+ S CDG DC+ DGSDE
Sbjct: 389 GQRDCRDGSDEAGCAPQKCQDSEFQCATGACLSFSMVCDGREDCV-DGSDEGGECSSSVC 447
Query: 238 -PNTCIHQCFN 247
P C H C+
Sbjct: 448 SPGLCYHSCYQ 458
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ R+E+AGM G +R LV + + P+S+ +D ++W D + + SV +DGS +++
Sbjct: 597 EPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMM 656
>gi|432095897|gb|ELK26817.1| Very low-density lipoprotein receptor [Myotis davidii]
Length = 899
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 151/339 (44%), Gaps = 61/339 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 129 CRTNEISCGAHSTQCIPESWRCDGENDCDSGEDEENCVNVTCSSDEFTCSSGRCISRNFV 188
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC DGSDE N C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 189 CNGQDDC-NDGSDELNCAPPSCGAHEFQCSASS-CIPLSWVCDDDADCSDQSDESLEQCG 246
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 247 RQPVMHTKCPASEIQCG-SGECIHKKWRCDGDPDCR-----DGSDE-----VNCPSRTCR 295
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 296 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDIIKVC 354
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 355 NQEQDCRDWSDEPLKECHVNECLVNNGGCSHICRDLVIGYECDCAAGFELIDRKTCGDID 414
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
EC G C Q C N Y C C+ GY + C AV
Sbjct: 415 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAV 453
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/384 (27%), Positives = 160/384 (41%), Gaps = 93/384 (24%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+G C P++ +C ++ +C+ L CDG DC++G DE C F C G+
Sbjct: 41 EGVGRKAKCDPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCEKKTCAESDFVCNNGQ 99
Query: 217 CIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST 273
CIP W+CDG DC EDGSD+ P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 100 CIPSRWQCDGDPDC-EDGSDDSPEQCHMRTCRTNEISCGAHSTQCIPESWRCDGENDCDS 158
Query: 274 ----------------------------------DDIVDNTDEDWDKFHQCFNGQVQCAL 299
DD D +DE C + QC+
Sbjct: 159 GEDEENCVNVTCSSDEFTCSSGRCISRNFVCNGQDDCNDGSDELNCAPPSCGAHEFQCSA 218
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALS 357
S CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 219 S-SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVMHTKCPASEIQCG-SGECIHKK 271
Query: 358 KFCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRG 397
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 272 WRCDGDPDCRDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNV 331
Query: 398 AMCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTH 433
C P +C+D +ECL+ +G C C +
Sbjct: 332 NQCLGPGKFKCRSGECIDIIKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICRDLV 391
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVN 457
+ Y C C G+ L D K+C ++
Sbjct: 392 IGYECDCAAGFEL-IDRKTCGDID 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 95/197 (48%), Gaps = 21/197 (10%)
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
A + C P S EG A+C P QF C G+CI WKCDG DC DGSDE
Sbjct: 23 AAGPETCAAAPARSVDFREGVGRKAKCDPSQFQCTNGRCITLLWKCDGDEDCA-DGSDEK 81
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQ 296
N C C + +CIP W CD + DC D +D+ ++ H C ++
Sbjct: 82 NCEKKTCAESDFVCN-NGQCIPSRWQCDGDPDCE-----DGSDDSPEQCHMRTCRTNEIS 135
Query: 297 C-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C A S +CIP +W CD E DC + + +N V C +E C SS +C++
Sbjct: 136 CGAHSTQCIPESWRCDGENDCDSGEDEENCVN----------VTCSSDEFTC-SSGRCIS 184
Query: 356 LSKFCDGKPDCSNGEDE 372
+ C+G+ DC++G DE
Sbjct: 185 RNFVCNGQDDCNDGSDE 201
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 41 DEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA 98
D+ ++ K I N + A+ + +SL + + +S L + L NS DL
Sbjct: 488 DDKVGRHVKMIDNVYNPAAIAVDWVYKSLYWTDAASKTISVATLDGTKRKLLFNS-DLRE 546
Query: 99 PEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
P +D ++EKAGM+G +R PLV +IQWP+ + +D + LYW
Sbjct: 547 PASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVAVDIQWPNGITLDLIKSRLYWL 606
Query: 145 DSHLNTVESVRVDGSHNAVLCHPNEL 170
DS L+ + SV ++G ++ E
Sbjct: 607 DSKLHMLSSVDLNGQDRRIVLKSLEF 632
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 96/258 (37%), Gaps = 37/258 (14%)
Query: 2 IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ C ++ C A S +CIP +W CD E DC + + +N + + ++
Sbjct: 126 MRTCRTNEISCGAHSTQCIPESWRCDGENDCDSGEDEENCVNVTCSSDEFTCSSGRCISR 185
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL--------------DE 106
F Q C N S L CA + + + A PL DE
Sbjct: 186 NFVCNGQDDC-----NDGSDELNCAPPSCGAHEFQCSASSCIPLSWVCDDDADCSDQSDE 240
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN----A 162
LE+ G + IQ S I + CD + DGS +
Sbjct: 241 SLEQCGRQPVMHTKCPASEIQCGSGECIHKK----WRCDGDPDC-----RDGSDEVNCPS 291
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPE 220
C P++ C C+ S+ C+G DC +G DE N PG+F C G+CI
Sbjct: 292 RTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDI 350
Query: 221 SWKCDGFVDCLEDGSDEP 238
C+ DC D SDEP
Sbjct: 351 IKVCNQEQDC-RDWSDEP 367
>gi|91093443|ref|XP_970553.1| PREDICTED: similar to vitellogenin receptor [Tribolium castaneum]
gi|270015513|gb|EFA11961.1| hypothetical protein TcasGA2_TC004042 [Tribolium castaneum]
Length = 441
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/334 (35%), Positives = 154/334 (46%), Gaps = 36/334 (10%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKC 217
S A C N+ C + +CV CDG PDCS+G DE C +P F C +C
Sbjct: 20 SSKASNCTDNDFFC-QNFECVPSKMQCDGNPDCSDGSDEHDCDMFHCASPDFFRCKNSRC 78
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIPHNWLCDEEM 269
I ++ CD DC +D SDE N + C Q QC K CIP W+C+ E
Sbjct: 79 ISSAFVCDLENDC-DDFSDEENCEEFKKKLEKNSTCTRDQWQCT-DKLCIPLEWVCNGEP 136
Query: 270 DCSTDDIVDNTDEDWDKFH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC +D +DE H +C +G +C + CI W CD + DC DN+DE
Sbjct: 137 DC-----LDGSDEALGCSHTMECNDG-FKCK-NGHCIFKEWRCDGQDDCR-----DNSDE 184
Query: 328 -DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
D + +F C + C+ LS+ CD C + DEG C K CEN
Sbjct: 185 EDCESHFELKECTLENQRFLCSDTKTCIKLSEVCDEVNHCPDKSDEGFSC--KKTCEN-- 240
Query: 387 CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C P G C CP G +N ++ C D +EC I G CDQ C NT S+ C C + Y
Sbjct: 241 CSHNCVQLPTGPKCLCPKGYRNIDEKHCQDINECEIYGICDQKCKNTPGSFECYCEDNYN 300
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
L+ D KSC A A + FSS IR L
Sbjct: 301 LQEDKKSCKA----HFGEALMFFSSKDQIRAYLL 330
>gi|126540381|emb|CAL47126.1| lipophorin receptor [Blattella germanica]
Length = 863
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 159/373 (42%), Gaps = 77/373 (20%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C P E C + +CV L+ CD PDCS+G DE CN C +F+CG GKCI W
Sbjct: 86 VCSPEEFTCRAMPGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQRRW 144
Query: 223 ----------------------------------------KCDGFVDCLEDGSDEPNTCI 242
+CDG DC DGSDE N
Sbjct: 145 VCDRDDDCGDGSDEQDCPHTPCNAETEFNCSENFCITARWRCDGDADC-PDGSDEVNCTT 203
Query: 243 H--------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFN 292
H C + +C CI +W+CD + DC +DE + C
Sbjct: 204 HSGGANTHSHCLPREFECEDRLTCIHQSWVCDGDKDCP-----GGSDESASRCQNVTCRP 258
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSN 351
Q QC ++ CIP + C +C DE ++ + A C P E CG
Sbjct: 259 DQFQCR-NRACIPGHLHCSGAPECP--------DESDEENCTSPAPKCDPRTEFECGGG- 308
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAG-QNP 408
C+ ++K CD KPDC N EDE K +C+ N CS C TP G C C G +
Sbjct: 309 MCIPIAKVCDKKPDCPNWEDEPTDKCGKNECKENNGGCSQLCVDTPGGYYCDCRRGFKLM 368
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASII 467
+ C D +EC + G+C Q+C N ++ C C EGY P D C A+ + AS++
Sbjct: 369 DNRTCDDVNECEVPGTCSQSCINEKGTFKCQCVEGYLRDPRDHTRCKAM----EGHASLL 424
Query: 468 FSSTVDIRRIHLN 480
F+ DIR+I L+
Sbjct: 425 FARRHDIRKISLD 437
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPH 261
C+ +F C G+CIP W+CD DC DGSDE P+ C + C + C A+ +C+P
Sbjct: 46 CSSSEFKCNNGRCIPVHWQCDNEKDC-SDGSDEVPSVCQVKVCSPEEFTCRAMPGECVPL 104
Query: 262 NWLCDEEMDCS--TDDIVDNTDEDWDKF------------------------------HQ 289
W+CD+ DCS +D+ N D+F H
Sbjct: 105 TWMCDDNPDCSDGSDEKACNETCRSDEFTCGNGKCIQRRWVCDRDDDCGDGSDEQDCPHT 164
Query: 290 CFNGQVQCALSKK-CIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
N + + S+ CI W CD + DC +D++ T SH C P E
Sbjct: 165 PCNAETEFNCSENFCITARWRCDGDADCPDGSDEVNCTTHSGGANTHSH----CLPREFE 220
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE-------------------------------GPF 375
C C+ S CDG DC G DE P
Sbjct: 221 CEDRLTCIHQSWVCDGDKDCPGGSDESASRCQNVTCRPDQFQCRNRACIPGHLHCSGAPE 280
Query: 376 CNNKADCEN-LKCSHKCSPTPR----GAMCF-----------CPAGQNPNKTQCVDADEC 419
C +++D EN + KC P G MC CP ++ +C +
Sbjct: 281 CPDESDEENCTSPAPKCDPRTEFECGGGMCIPIAKVCDKKPDCPNWEDEPTDKCGKNECK 340
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C Q C +T Y C C G+ L D ++C VN
Sbjct: 341 ENNGGCSQLCVDTPGGYYCDCRRGFKLM-DNRTCDDVN 377
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+AGM G +RS +V+ ++WP+ L +D + +YW D+ LN + S DG V+
Sbjct: 558 EPKIERAGMDGSHRSTIVSYEVKWPNGLTLDLVKKRVYWVDAKLNVISSCNYDGQDRRVI 617
Query: 165 CH-PNELR 171
+ P+ L+
Sbjct: 618 LYSPDALQ 625
>gi|260815491|ref|XP_002602506.1| hypothetical protein BRAFLDRAFT_227282 [Branchiostoma floridae]
gi|229287817|gb|EEN58518.1| hypothetical protein BRAFLDRAFT_227282 [Branchiostoma floridae]
Length = 778
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 155/338 (45%), Gaps = 45/338 (13%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ + C P E C + +C+ + CD DC + DE C+ +F C CIP
Sbjct: 82 DQLTCDPTEHTC-DNGKCITVRWVCDQDNDCGDNSDEKNCPTPTCSTNEFMCNNSYCIPR 140
Query: 221 SWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
W CDG DCL D SDE P T +C + + C+ ++ C+ +W CD + DC+
Sbjct: 141 RWLCDGDFDCL-DLSDEKDCPSVPPGT---ECSSREFTCS-NRDCVHISWKCDGDEDCA- 194
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE D QC + QC + CI CD + DC D +DE ++
Sbjct: 195 ----DGSDE-VDCVRQCSEDEFQCD-NGLCIAGPLQCDGKRDCD-----DGSDE---RHD 240
Query: 334 SHNAVLCHPN-ELRC-----GSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCE--N 384
+ C P E C G +C+ SK CDG DCS+G DE G N +C N
Sbjct: 241 CQPIISCDPTKEFECVNSQTGVREKCIPFSKVCDGNDDCSDGSDEPGQHVCNVDECAVNN 300
Query: 385 LKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
C C TP C C G Q+ +T C D DEC I G+C Q C NTH Y C C
Sbjct: 301 GSCMEGCVNTPHSYYCTCNDGFDLQDDGRT-CKDKDECAIFGTCSQLCENTHGGYKCECV 359
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+GYTL P C A E A +IF++ D+R I +
Sbjct: 360 DGYTLDPRNGYCKA----DGEEAKLIFANRRDLRMIDM 393
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 130/337 (38%), Gaps = 96/337 (28%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKK--CIPH 261
C+ +F+C KCIP W+CDG DC + ++P+ C + C + C + CIP
Sbjct: 3 CSDSEFTCDDSKCIPSRWQCDGDNDCADGSDEKPDICNQRTCRSDHFSCEENGGGICIPR 62
Query: 262 NWLCDEEMDCST----------------------------------DDIVDNTDEDWDKF 287
W+CD + DC +D DN+DE
Sbjct: 63 TWVCDRDADCENGRDEEGCDQLTCDPTEHTCDNGKCITVRWVCDQDNDCGDNSDEKNCPT 122
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
C + C S CIP WLCD + DC +D +DE D C E C
Sbjct: 123 PTCSTNEFMCNNS-YCIPRRWLCDGDFDC-----LDLSDEK-DCPSVPPGTECSSREFTC 175
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE---------------------GPF-CNNKADCENL 385
S+ CV +S CDG DC++G DE GP C+ K DC++
Sbjct: 176 -SNRDCVHISWKCDGDEDCADGSDEVDCVRQCSEDEFQCDNGLCIAGPLQCDGKRDCDDG 234
Query: 386 K-CSHKCSP-----------------------TPRGAMC----FCPAGQNPNKTQCVDAD 417
H C P P +C C G + + D
Sbjct: 235 SDERHDCQPIISCDPTKEFECVNSQTGVREKCIPFSKVCDGNDDCSDGSDEPGQHVCNVD 294
Query: 418 ECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
EC + +GSC + C NT SY C+C +G+ L+ DG++C
Sbjct: 295 ECAVNNGSCMEGCVNTPHSYYCTCNDGFDLQDDGRTC 331
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 48 FKRILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+ + G HT +A+++ H +S L + L + DL P L
Sbjct: 446 VRLVSEGIHTPDGVAIDWIHAKMYWTDTGTDTISVATLD-GNMRKTLFATDLDEPRALAL 504
Query: 105 D--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
D ++E+AGM+G R LV NI+WP+ L +D +YW D+ L+T
Sbjct: 505 DPTEGFMYWSDWGQPAKIERAGMNGFFREVLVQSNIEWPNGLTLDLLGKRIYWVDAKLHT 564
Query: 151 VESVRVDGS-------HNAVLCHP 167
+ SV G+ + +L HP
Sbjct: 565 ISSVTTTGADRRTIIQDDVLLAHP 588
>gi|126540379|emb|CAL47125.1| lipophorin receptor [Blattella germanica]
Length = 887
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 117/373 (31%), Positives = 159/373 (42%), Gaps = 77/373 (20%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C P E C + +CV L+ CD PDCS+G DE CN C +F+CG GKCI W
Sbjct: 86 VCSPEEFTCRAMPGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQRRW 144
Query: 223 ----------------------------------------KCDGFVDCLEDGSDEPNTCI 242
+CDG DC DGSDE N
Sbjct: 145 VCDRDDDCGDGSDEQDCPHTPCNAETEFNCSENFCITARWRCDGDADC-PDGSDEVNCTT 203
Query: 243 H--------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFN 292
H C + +C CI +W+CD + DC +DE + C
Sbjct: 204 HSGGANTHSHCLPREFECEDRLTCIHQSWVCDGDKDCP-----GGSDESASRCQNVTCRP 258
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSN 351
Q QC ++ CIP + C +C DE ++ + A C P E CG
Sbjct: 259 DQFQCR-NRACIPGHLHCSGAPECP--------DESDEENCTSPAPKCDPRTEFECGGG- 308
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAG-QNP 408
C+ ++K CD KPDC N EDE K +C+ N CS C TP G C C G +
Sbjct: 309 MCIPIAKVCDKKPDCPNWEDEPTDKCGKNECKENNGGCSQLCVDTPGGYYCDCRRGFKLM 368
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASII 467
+ C D +EC + G+C Q+C N ++ C C EGY P D C A+ + AS++
Sbjct: 369 DNRTCDDVNECEVPGTCSQSCINEKGTFKCQCVEGYLRDPRDHTRCKAM----EGHASLL 424
Query: 468 FSSTVDIRRIHLN 480
F+ DIR+I L+
Sbjct: 425 FARRHDIRKISLD 437
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPH 261
C+ +F C G+CIP W+CD DC DGSDE P+ C + C + C A+ +C+P
Sbjct: 46 CSSSEFKCNNGRCIPVHWQCDNEKDC-SDGSDEVPSVCQVKVCSPEEFTCRAMPGECVPL 104
Query: 262 NWLCDEEMDCS--TDDIVDNTDEDWDKF------------------------------HQ 289
W+CD+ DCS +D+ N D+F H
Sbjct: 105 TWMCDDNPDCSDGSDEKACNETCRSDEFTCGNGKCIQRRWVCDRDDDCGDGSDEQDCPHT 164
Query: 290 CFNGQVQCALSKK-CIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
N + + S+ CI W CD + DC +D++ T SH C P E
Sbjct: 165 PCNAETEFNCSENFCITARWRCDGDADCPDGSDEVNCTTHSGGANTHSH----CLPREFE 220
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE-------------------------------GPF 375
C C+ S CDG DC G DE P
Sbjct: 221 CEDRLTCIHQSWVCDGDKDCPGGSDESASRCQNVTCRPDQFQCRNRACIPGHLHCSGAPE 280
Query: 376 CNNKADCEN-LKCSHKCSPTPR----GAMCF-----------CPAGQNPNKTQCVDADEC 419
C +++D EN + KC P G MC CP ++ +C +
Sbjct: 281 CPDESDEENCTSPAPKCDPRTEFECGGGMCIPIAKVCDKKPDCPNWEDEPTDKCGKNECK 340
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C Q C +T Y C C G+ L D ++C VN
Sbjct: 341 ENNGGCSQLCVDTPGGYYCDCRRGFKLM-DNRTCDDVN 377
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+AGM G +RS +V+ ++WP+ L +D + +YW D+ LN + S DG V+
Sbjct: 558 EPKIERAGMDGSHRSTIVSYEVKWPNGLTLDLVKKRVYWVDAKLNVISSCNYDGQDRRVI 617
Query: 165 CH-PNELR 171
+ P+ L+
Sbjct: 618 LYSPDALQ 625
>gi|195573969|ref|XP_002104962.1| GD18174 [Drosophila simulans]
gi|194200889|gb|EDX14465.1| GD18174 [Drosophila simulans]
Length = 883
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 158/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 68 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 126
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 127 KRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERS 185
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 186 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 240
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 241 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGVNQGGCNSTSEFDCGG-G 296
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QCV LSK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEMGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 412
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 413 LLARRHDIRKIALD 426
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 95/227 (41%), Gaps = 59/227 (25%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCI 259
A C+ QF CG G CIP W+CD DC DGSDE N C + C + +C+
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCV 87
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNG------------------- 293
P W+CD+ DCS D +DE D+F C NG
Sbjct: 88 PLAWMCDQSKDCS-----DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGS 141
Query: 294 -QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ +C + + CI W+CD + DCS D +DE + C
Sbjct: 142 DEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPC 196
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 197 LSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 238
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 549 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 608
Query: 167 PNE 169
E
Sbjct: 609 SGE 611
>gi|161078655|ref|NP_001097932.1| lipophorin receptor 1, isoform D [Drosophila melanogaster]
gi|158030403|gb|ABW08772.1| lipophorin receptor 1, isoform D [Drosophila melanogaster]
gi|260436885|gb|ACX37661.1| FI11925p [Drosophila melanogaster]
Length = 830
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 158/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 68 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 126
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 127 KRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERS 185
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 186 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 240
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 241 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGINQGGCNATSEFDCGG-G 296
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QCV LSK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 412
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 413 LLARRHDIRKIALD 426
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 95/227 (41%), Gaps = 59/227 (25%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCI 259
A C+ QF CG G CIP W+CD DC DGSDE N C + C + +C+
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCV 87
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNG------------------- 293
P W+CD+ DCS D +DE D+F C NG
Sbjct: 88 PLAWMCDQSKDCS-----DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGS 141
Query: 294 -QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ +C + + CI W+CD + DCS D +DE + C
Sbjct: 142 DEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPC 196
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 197 LSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 238
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 549 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 608
Query: 167 PNEL 170
E
Sbjct: 609 SGEY 612
>gi|195349517|ref|XP_002041289.1| GM10223 [Drosophila sechellia]
gi|194122984|gb|EDW45027.1| GM10223 [Drosophila sechellia]
Length = 883
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 158/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 68 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 126
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 127 KRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERS 185
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 186 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 240
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 241 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGVNQGGCNSTSEFDCGG-G 296
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QCV LSK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEMGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 412
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 413 LLARRHDIRKIALD 426
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 95/227 (41%), Gaps = 59/227 (25%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCI 259
A C+ QF CG G CIP W+CD DC DGSDE N C + C + +C+
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCV 87
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNG------------------- 293
P W+CD+ DCS D +DE D+F C NG
Sbjct: 88 PLAWMCDQSKDCS-----DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGS 141
Query: 294 -QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ +C + + CI W+CD + DCS D +DE + C
Sbjct: 142 DEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPC 196
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 197 LSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 238
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 549 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 608
Query: 167 PNE 169
E
Sbjct: 609 SGE 611
>gi|348573069|ref|XP_003472314.1| PREDICTED: very low-density lipoprotein receptor-like [Cavia
porcellus]
Length = 847
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/362 (32%), Positives = 166/362 (45%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 87 CRINEISCGARSTQCIPVSWRCDGESDCDSGEDEEHCGNITCSPDEFTCSSGRCISRNFV 146
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD 281
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DC +D+ ++
Sbjct: 147 CNGQDDC-NDGSDELDCAPPTCSAHEFQCSTSS-CIPLSWVCDDDADCADQSDESLEQCG 204
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + + C
Sbjct: 205 RQPVMHTKCQASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCR 253
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ C C+ S+ C+G DC +G DE GP C
Sbjct: 254 PDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNANQCLGPGKFKCRSGECIDILKVC 312
Query: 377 NNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
N + DC N CSH C G C C AG + ++ C D D
Sbjct: 313 NQQQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDID 372
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I
Sbjct: 373 ECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKI 428
Query: 478 HL 479
L
Sbjct: 429 GL 430
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 154/376 (40%), Gaps = 93/376 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN+ +C ++ +C+ L CDG DC +G DE C F C G+C+P W+C
Sbjct: 7 CEPNQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCVPNRWQC 65
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC + + D
Sbjct: 66 DGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSGE-----D 119
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCD---------------------EEMDCSTDD 320
E+ C + C+ S +CI N++C+ E CST
Sbjct: 120 EEHCGNITCSPDEFTCS-SGRCISRNFVCNGQDDCNDGSDELDCAPPTCSAHEFQCSTSS 178
Query: 321 IV-------------DNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPD 365
+ D +DE ++ + C +E++CGS +C+ CDG PD
Sbjct: 179 CIPLSWVCDDDADCADQSDESLEQCGRQPVMHTKCQASEIQCGSG-ECIHKKWRCDGDPD 237
Query: 366 CSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAG 405
C +G DE C ++ +CE+ C H +C+ C P
Sbjct: 238 CKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNANQCLGPGK 297
Query: 406 QNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCT 441
+C+D +ECL+ +G C C + + Y C C
Sbjct: 298 FKCRSGECIDILKVCNQQQDCRDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCA 357
Query: 442 EGYTLRPDGKSCTAVN 457
G+ L D K+C ++
Sbjct: 358 AGFEL-IDRKTCGDID 372
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 90/173 (52%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+C P QF C G+CI WKCDG DC+ DGSDE N C C + +C+P+
Sbjct: 5 TKCEPNQFQCTNGRCITLLWKCDGDEDCV-DGSDEKNCVKKTCAESDFVCN-NGQCVPNR 62
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE ++ H C ++ C A S +CIP +W CD E DC
Sbjct: 63 WQCDGDPDCE-----DGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDC--- 114
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D D+ N + C P+E C SS +C++ + C+G+ DC++G DE
Sbjct: 115 ------DSGEDEEHCGN-ITCSPDEFTC-SSGRCISRNFVCNGQDDCNDGSDE 159
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 471 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 529
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 530 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 589
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 590 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 617
>gi|296379|emb|CAA79581.1| low density lipoprotein receptor [Mus musculus]
Length = 864
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 149/332 (44%), Gaps = 36/332 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCPATTCGPAHFRCKSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDEPNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
DG VDC++ + P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCVDGSHEWPQNCQAEDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK-- 224
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ---DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LGC 271
Query: 335 HNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N C PN+ +C S +C++L K CD DC + DE +C N CSH C
Sbjct: 272 VNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHIC 330
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 331 KDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPHT 390
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 391 RVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 106/220 (48%), Gaps = 35/220 (15%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPESWK 223
NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+SW+
Sbjct: 30 NEFQC-RDGKCIASKWVCDGSPECPDGSDESPKTCMSVTCQSNQFSCGGRVSRCIPDSWR 88
Query: 224 CDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG VDC E+ SDE P TC F Q KCI ++CD + DC +D
Sbjct: 89 CDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC-----LDG 137
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-------DKY 332
+DE C +C S CIP W CD ++DC VD + E W D
Sbjct: 138 SDEAHCPATTCGPAHFRCK-SSICIPSLWACDGDVDC-----VDGSHE-WPQNCQAEDTA 190
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C E CGSS +C+ S CDG+ DC + DE
Sbjct: 191 SKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 85/188 (45%), Gaps = 23/188 (12%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPHNWLC 265
+F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP +W C
Sbjct: 31 EFQCRDGKCIASKWVCDGSPEC-PDGSDESPKTCMSVTCQSNQFSCGGRVSRCIPDSWRC 89
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
D ++DC D +DE C +C KCI ++CD + DC +D +
Sbjct: 90 DGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC-----LDGS 138
Query: 326 DEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
DE +H A C P RC SS C+ CDG DC +G E P D +
Sbjct: 139 DE------AHCPATTCGPAHFRCKSS-ICIPSLWACDGDVDCVDGSHEWPQNCQAEDTAS 191
Query: 385 LKCSHKCS 392
S CS
Sbjct: 192 KGVSSPCS 199
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>gi|281362588|ref|NP_733119.2| lipophorin receptor 1, isoform G [Drosophila melanogaster]
gi|272477174|gb|AAF56499.3| lipophorin receptor 1, isoform G [Drosophila melanogaster]
Length = 889
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 158/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 68 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 126
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 127 KRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERS 185
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 186 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 240
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 241 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGINQGGCNATSEFDCGG-G 296
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QCV LSK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 297 QCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLS 356
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 357 PDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 412
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 413 LLARRHDIRKIALD 426
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 95/227 (41%), Gaps = 59/227 (25%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCI 259
A C+ QF CG G CIP W+CD DC DGSDE N C + C + +C+
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCV 87
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNG------------------- 293
P W+CD+ DCS D +DE D+F C NG
Sbjct: 88 PLAWMCDQSKDCS-----DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGS 141
Query: 294 -QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ +C + + CI W+CD + DCS D +DE + C
Sbjct: 142 DEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPC 196
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 197 LSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 238
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 549 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 608
Query: 167 PNE 169
E
Sbjct: 609 SGE 611
>gi|47228667|emb|CAG07399.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2304
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 153/322 (47%), Gaps = 37/322 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 1015 ANGRCININWRCDNDNDCGDNSDEAG-CSHSCSSVQFKCNSGRCIPEYWTCDGDNDCGDY 1073
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--W 284
+ C +Q C + QC + CIP W CD + DC +D +DE
Sbjct: 1074 SDETHANCTNQATRPPGGCHVDEFQCRMDSLCIPMRWRCDGDTDC-----MDLSDERNCE 1128
Query: 285 DKFHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + C S +CI W+CD + DC DN+DED + +A++C +
Sbjct: 1129 GVTHMCDPAVKFSCKDSARCISKAWVCDGDSDCE-----DNSDED-----NCDALVCKLS 1178
Query: 344 ELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C +++ C+ K CDG DC +G DE C+ A +N CSH C+ P G MC
Sbjct: 1179 HHTCATNDSICLPAEKLCDGTDDCPDGSDE-KLCDLCA-LDNGGCSHNCTIIPGEGFMCS 1236
Query: 402 CPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
CP G NKT C C C Q C S CSC EG+ L D +SC + +
Sbjct: 1237 CPLGMELGADNKT-CQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELEADMESCKSTDP 1295
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1296 FK---PFIIFSNRHEIRRIDLH 1314
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 104/197 (52%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCG 348
C + Q C CI W CD E DC D +DE D SH+ V C NE C
Sbjct: 8 CSSKQFVCKDQVTCISKGWRCDGEKDCP-----DGSDESPD-ICSHSKVNQCPVNEHGCL 61
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQ- 406
C+ +S+ CDG PDC++G DEGP C +A C +C CS T G C+C AG
Sbjct: 62 DPEVCIPMSRLCDGVPDCTDGWDEGPHCREQAPACIAQRCQFNCSVTHDGPRCYCSAGYE 121
Query: 407 -NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
+ C D +EC + G+C QTC+NT SY CSC EGY L+PD +SC A N P D
Sbjct: 122 VTADGRTCKDFNECNVYGTCSQTCSNTEGSYTCSCVEGYLLQPDNRSCKAKNDPVDRLPM 181
Query: 466 IIFSSTVDIRRIHLNGS 482
++ ++ DIR L+G+
Sbjct: 182 LLIANLHDIRCTTLSGA 198
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 117/263 (44%), Gaps = 52/263 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ L CDG DC N EDE C+A C P Q+ C G+CIP SW
Sbjct: 898 CPADRFKC-QNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYPCASGRCIPISW 956
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-------------CFN----------------GQVQCA 253
CD DC D SDEP++C CF+ Q CA
Sbjct: 957 TCDLDDDC-GDRSDEPDSCGELVAPSRCSSSVRLFCFHISPLDPPSAYPTCFPLTQFTCA 1015
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI NW CD + DC DN+DE H C + Q +C S +CIP W CD +
Sbjct: 1016 -NGRCININWRCDNDNDCG-----DNSDEA-GCSHSCSSVQFKCN-SGRCIPEYWTCDGD 1067
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D D T + + CH +E +C + C+ + CDG DC + DE
Sbjct: 1068 NDCG--DYSDETHANCTNQATRPPGGCHVDEFQCRMDSLCIPMRWRCDGDTDCMDLSDE- 1124
Query: 374 PFCNNKADCENLKCSHKCSPTPR 396
+CE + +H C P +
Sbjct: 1125 ------RNCEGV--THMCDPAVK 1139
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 143/358 (39%), Gaps = 86/358 (24%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
+++KA M G + +T K + WP+ L +D Q ILYW D++ + +E V ++ + V
Sbjct: 658 KIKKAWMDGSHHQIFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIEMVYLNTTERKVVY 717
Query: 164 ----------LCHP------NELRCGSSNQCVALSK-----------------FCDGKPD 190
LCH NE R GS + ++K + +
Sbjct: 718 EGQELTHAFGLCHYKQFLFWNEYRGGSIYKLDQVTKTVTLLRNERPPIFEIRVYDAHQQQ 777
Query: 191 CSNGEDEGPFCNAE-----CTPGQ-FSCGMGKC-------------IPESWKCDGFVDCL 231
S+ PF E PG F G C IP+ C D +
Sbjct: 778 GSSASHTRPFRTGENMSDSFIPGSPFGLGSNACRVNNGGCSSLCLAIPDGRSCGCADDQI 837
Query: 232 EDG------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DG ++ QC G+ C + +CI W CD + DC +DN+DE +
Sbjct: 838 LDGDNVTCKANPSYVNPPQCQPGEFACK-NNRCIQERWKCDGDNDC-----LDNSDEAPE 891
Query: 286 KFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
HQ C + +C + +CIP WLCD + DC D+ NT + +A C PN
Sbjct: 892 LCHQHTCPADRFKCQ-NNRCIPLRWLCDGDNDCGNDEDESNT--------TCSARTCPPN 942
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
+ C +S +C+ +S CD DC + DE C L +CS + R CF
Sbjct: 943 QYPC-ASGRCIPISWTCDLDDDCGDRSDE------PDSCGELVAPSRCSSSVR-LFCF 992
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E++ + G R LV +I WP+ + IDY + +LYWCD+ + +E + ++ N L
Sbjct: 2055 RIERSRLDGSQRLVLVNVSISWPNGISIDYEEGLLYWCDARTDKIERINLETGENRELVL 2114
Query: 167 PN 168
N
Sbjct: 2115 AN 2116
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCG-MGKCIPE 220
CH +E +C + C+ + CDG DC + DE C P +FSC +CI +
Sbjct: 1092 CHVDEFQCRMDSLCIPMRWRCDGDTDCMDLSDERNCEGVTHMCDPAVKFSCKDSARCISK 1151
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDN 279
+W CDG DC ED SDE N C CA + C+P LCD TDD D
Sbjct: 1152 AWVCDGDSDC-EDNSDEDNCDALVCKLSHHTCATNDSICLPAEKLCD-----GTDDCPDG 1205
Query: 280 TDE 282
+DE
Sbjct: 1206 SDE 1208
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 327 RVERCDMDGQNRTKLVDTKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 384
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE-PNTCIH----QCFNGQVQCALSKKC 258
C+ QF C CI + W+CDG DC DGSDE P+ C H QC + C + C
Sbjct: 8 CSSKQFVCKDQVTCISKGWRCDGEKDC-PDGSDESPDICSHSKVNQCPVNEHGCLDPEVC 66
Query: 259 IPHNWLCDEEMDCS 272
IP + LCD DC+
Sbjct: 67 IPMSRLCDGVPDCT 80
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 159 SHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC 205
SH+ V C NE C C+ +S+ CDG PDC++G DEGP C +
Sbjct: 46 SHSKVNQCPVNEHGCLDPEVCIPMSRLCDGVPDCTDGWDEGPHCREQA 93
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T + WP+ L +DY + + W D+ + +
Sbjct: 1435 WDASLP-------RIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDARSDAI 1487
Query: 152 ESVRVDGS 159
S DGS
Sbjct: 1488 YSAMYDGS 1495
>gi|442621197|ref|NP_001097931.3| lipophorin receptor 1, isoform S [Drosophila melanogaster]
gi|440217908|gb|ABW08771.3| lipophorin receptor 1, isoform S [Drosophila melanogaster]
Length = 887
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 156/369 (42%), Gaps = 68/369 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK- 223
C NE +C + +QC+ S CDG DC + DE CN C +F+CG G+CI + WK
Sbjct: 71 CPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEA-HCNQTCRADEFTCGNGRCIQKRWKC 129
Query: 224 ---------------------------------------CDGFVDCLEDGSDEPN----- 239
CDG DC DGSDE +
Sbjct: 130 DHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERSCANVT 188
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC 297
C + + QC C+ H+WLCD + DC D DE K C Q QC
Sbjct: 189 KTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRADQFQC 243
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVAL 356
+ CIP + C+ + DC+ D D D N C+ +E CG QCV L
Sbjct: 244 G-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGINQGGCNATSEFDCGG-GQCVPL 299
Query: 357 SKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQ 412
SK CD + DC +GEDE G N+ +N C H+C G C C G +P+K
Sbjct: 300 SKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRN 359
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSST 471
C D +EC + G C Q C N + C C GY P + C A + AS++ +
Sbjct: 360 CQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASLLLARR 415
Query: 472 VDIRRIHLN 480
DIR+I L+
Sbjct: 416 HDIRKIALD 424
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 47/220 (21%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPH 261
A C+ QF CG G CIP W+CD DC DGSDE N C++ C N + +C +CIP
Sbjct: 29 ATCSSDQFRCGNGNCIPNKWRCDQESDC-ADGSDEANELCMNACPNNEFKCQTVDQCIPR 87
Query: 262 NWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNG--------------------QVQCAL 299
+WLCD DC +D+ N D+F C NG + +C +
Sbjct: 88 SWLCDGSNDCRDKSDEAHCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPV 146
Query: 300 ------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+ CI W+CD + DCS D +DE + C +E +C
Sbjct: 147 VPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQC 201
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 202 KDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 547 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 606
Query: 167 PNE 169
E
Sbjct: 607 SGE 609
>gi|195059155|ref|XP_001995574.1| GH17685 [Drosophila grimshawi]
gi|193896360|gb|EDV95226.1| GH17685 [Drosophila grimshawi]
Length = 1879
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 120/385 (31%), Positives = 168/385 (43%), Gaps = 86/385 (22%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFSCGMGKCIPESW 222
LCH ++ C + +CV S CDG DC + DE A C G F C G CI SW
Sbjct: 1057 LCHTHQHAC-DNGKCVDYSLVCDGTNDCGDNSDELRCKSAASCERGMFQCSSGSCIASSW 1115
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI--- 276
+CDG +DC D SDE N C QC +C L + C+ ++CD DC +D++
Sbjct: 1116 ECDGRIDC-SDASDEHNKCNQRQCPEKMHRCLLGQ-CLDERFVCDGHNDCGDLSDELNCG 1173
Query: 277 ---------------VD---------------------------NTDEDWDKFHQCFNGQ 294
VD +++ D C +
Sbjct: 1174 NSPTGTAAVNISCGTVDLPRYQCASNLQMCLDLAVRCNGSAECPRGEDEADCGEMCSIYE 1233
Query: 295 VQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKY------FSHNAV-------- 338
QC SK+CI + CD+E DC+ D +DE+ DK+ +S +A
Sbjct: 1234 FQCGDSSKQCIRLEFRCDKERDCA-----DGSDEEHCDKHNETQLGYSPSAAGDPASGRR 1288
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C P+ C +CV +S+ C+G DC+NG DEGP C + C C H C TP GA
Sbjct: 1289 ACKPHLFDC-HDGECVDMSRVCNGFTDCTNGNDEGPQC--ASACRKQLCQHNCQATPAGA 1345
Query: 399 MCFCPAGQ--NPNKTQCVDADECLIDGS----CDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
+C C G + + CVD DEC+ G C Q C N SY C C + LR D S
Sbjct: 1346 VCTCNEGYRLDGDHRSCVDIDECVASGGAAQPCAQLCENMPGSYQCQCHADFMLRQDRSS 1405
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRI 477
C +++ A+++FSS +R +
Sbjct: 1406 CKSIH----GGATLLFSSYNQVRNL 1426
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 151/337 (44%), Gaps = 38/337 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGM--GKCIPES 221
CH ++ +C + C+ +K CDG+ DC++ DE C P F C G C+
Sbjct: 21 CHADQFQC-RNGVCILQAKMCDGRRDCTDNSDELECDYKLCRQPHWFPCAQPHGACLAAE 79
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSK------KCIPHNWLCDEEMDCSTD 274
C+G +CL G D+ C + + G+ C+ + CIP +++CD + DC+
Sbjct: 80 LICNGVDNCL--GGDDELHCPRRLVSLGRRNCSQYEYMCQDHSCIPLDFMCDGKTDCA-- 135
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D D T C G + CA + W+CD DD D +DE + F
Sbjct: 136 DGSDETAGCKQSATTCTTGHL-CANGRCLQRKQWVCD-----GVDDCGDGSDERNCENF- 188
Query: 335 HNAVLCHPN--ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--SHK 390
C P+ + C + C+ L++ CDG+ CS+G DE C +K DC +C
Sbjct: 189 -----CLPSMGKFMCRNRGSCLPLAQVCDGQAHCSDGSDESEACKSKPDCGAKQCPPGAT 243
Query: 391 CSPTP-RGAMCFCPAGQN--PNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C P GA C CP G K +C D +EC D C Q C NT Y C+C GY L
Sbjct: 244 CHMMPTSGAECLCPEGFRLLKFKEKCEDINECEERDDLCSQRCENTSGGYRCTCDAGYVL 303
Query: 447 -RPDGKSCTAVNVPQDE--PASIIFSSTVDIRRIHLN 480
+ +C A N E A +++++ V + +HL
Sbjct: 304 DTSNNHTCHATNSVSGERQQALLLYTTQVAVMGMHLK 340
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 140/377 (37%), Gaps = 96/377 (25%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAE-CTPGQFSCGM 214
S+ V C E C QC+ SK CDG DC + DE F + C Q +C
Sbjct: 1008 SNTKVKCGMAEFTCHDGQQCLEKSKRCDGHKDCQDYSDELHCSHFDKTKLCHTHQHACDN 1067
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
GKC+ S CDG DC ++ + C G QC+ S CI +W CD +DCS
Sbjct: 1068 GKCVDYSLVCDGTNDCGDNSDELRCKSAASCERGMFQCS-SGSCIASSWECDGRIDCS-- 1124
Query: 275 DIVDNTDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
D +DE +K H+C GQ C+ ++CD DC D+ D +
Sbjct: 1125 ---DASDEHNKCNQRQCPEKMHRCLLGQ--------CLDERFVCDGHNDCG--DLSDELN 1171
Query: 327 -----------------EDWDKYFSHNAV---------------------------LCHP 342
D +Y + + +C
Sbjct: 1172 CGNSPTGTAAVNISCGTVDLPRYQCASNLQMCLDLAVRCNGSAECPRGEDEADCGEMCSI 1231
Query: 343 NELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
E +CG SS QC+ L CD + DC++G DE C+ + + L S + P
Sbjct: 1232 YEFQCGDSSKQCIRLEFRCDKERDCADGSDE-EHCDKHNETQ-LGYSPSAAGDPASGRRA 1289
Query: 402 C-PAGQNPNKTQCVDADEC------LIDGS--------------CDQTCTNTHLSYVCSC 440
C P + + +CVD +G+ C C T VC+C
Sbjct: 1290 CKPHLFDCHDGECVDMSRVCNGFTDCTNGNDEGPQCASACRKQLCQHNCQATPAGAVCTC 1349
Query: 441 TEGYTLRPDGKSCTAVN 457
EGY L D +SC ++
Sbjct: 1350 NEGYRLDGDHRSCVDID 1366
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 100/224 (44%), Gaps = 45/224 (20%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMG-KCIPE 220
E RC SS +C+ ++ C+G DC++ DE +C +F+C G +C+ +
Sbjct: 971 EFRCRSSGECLTMAHRCNGHQDCADSSDESDCGDPHKSNTKVKCGMAEFTCHDGQQCLEK 1030
Query: 221 SWKCDGFVDCLEDGSDEP-----------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
S +CDG DC +D SDE +T H C NG KC+ ++ +CD
Sbjct: 1031 SKRCDGHKDC-QDYSDELHCSHFDKTKLCHTHQHACDNG--------KCVDYSLVCDGTN 1081
Query: 270 DCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C G QC+ S CI +W CD +DCS D +DE
Sbjct: 1082 DCG-----DNSDELRCKSAASCERGMFQCS-SGSCIASSWECDGRIDCS-----DASDE- 1129
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ N C RC QC+ CDG DC + DE
Sbjct: 1130 ---HNKCNQRQCPEKMHRC-LLGQCLDERFVCDGHNDCGDLSDE 1169
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G PLV+ I WP+ + +D +++ +YW D+ L +V+SVR DGS +
Sbjct: 468 IARASMDGSRSRPLVSDKIHWPNGIALDMHEERIYWVDAKLGSVQSVRPDGSSRRTVLDG 527
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 528 ILKHPYGL 535
>gi|281362596|ref|NP_001097934.2| lipophorin receptor 1, isoform K [Drosophila melanogaster]
gi|272477178|gb|ABW08774.2| lipophorin receptor 1, isoform K [Drosophila melanogaster]
Length = 1076
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 123/381 (32%), Positives = 162/381 (42%), Gaps = 70/381 (18%)
Query: 155 RVDGSH-NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
+ D +H A C P+E C S QCV L+ CD DCS+G DE CN C +F+C
Sbjct: 248 KSDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTC 306
Query: 213 GMGKCIPESWK----------------------------------------CDGFVDCLE 232
G G+CI + WK CDG DC
Sbjct: 307 GNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-S 365
Query: 233 DGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-- 285
DGSDE + C + + QC C+ H+WLCD + DC D DE
Sbjct: 366 DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANC 420
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NE 344
K C Q QC + CIP + C+ + DC+ D D D N C+ +E
Sbjct: 421 KNVTCRADQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGINQGGCNATSE 477
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
CG QCV LSK CD + DC +GEDE G N+ +N C H+C G C C
Sbjct: 478 FDCGG-GQCVPLSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCEC 536
Query: 403 PAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVP 459
G +P+K C D +EC + G C Q C N + C C GY P + C A
Sbjct: 537 HEGYKLSPDKRNCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA---- 592
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ AS++ + DIR+I L+
Sbjct: 593 SEGHASLLLARRHDIRKIALD 613
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 108/254 (42%), Gaps = 65/254 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF CG G CIP
Sbjct: 136 CDEKQFQCHSGD-CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN 194
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC DGSDE N C++ C N + +C +CIP +WLCD DC D
Sbjct: 195 KWRCDQESDC-ADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCR-----DK 248
Query: 280 TDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-A 337
+DE + C + C + +C+P W+CD+ DCS D +DE HN
Sbjct: 249 SDEAHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCS-----DGSDE-------HNCN 296
Query: 338 VLCHPNELRCG---------------------------------------SSNQCVALSK 358
C +E CG ++ C+A
Sbjct: 297 QTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRW 356
Query: 359 FCDGKPDCSNGEDE 372
CDG PDCS+G DE
Sbjct: 357 VCDGDPDCSDGSDE 370
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/181 (35%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 129 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 187
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ CIP+ W CD+E DC+ D +DE + + C N + +C +CIP +WLCD
Sbjct: 188 NGNCIPNKWRCDQESDCA-----DGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGS 242
Query: 314 MDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGED 371
DC D +DE +H A C P+E C S QCV L+ CD DCS+G D
Sbjct: 243 NDCR-----DKSDE------AHCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSD 291
Query: 372 E 372
E
Sbjct: 292 E 292
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 736 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 795
Query: 167 PNEL 170
E
Sbjct: 796 SGEY 799
>gi|195044271|ref|XP_001991788.1| GH12853 [Drosophila grimshawi]
gi|193901546|gb|EDW00413.1| GH12853 [Drosophila grimshawi]
Length = 2095
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG+ DC + DE + CT F+C G CI ++++CDG DC +D SDE
Sbjct: 371 CIPRPWLCDGENDCKDYSDEVHCNRSSCTDEHFTCNDGYCISQAFRCDGERDC-DDNSDE 429
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 430 HKCPAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCQQ 484
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K QC +G+ +CA CIP W CD+E DC + + D + + C P+E
Sbjct: 485 KPSQCTSGEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGNMNPEHPLTCGPDEF 539
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C + +C+ + CDG PDCS+ EDE G F C K + NLK
Sbjct: 540 TC-HNGRCILRTWLCDGYPDCSSAEDEVDCHLLCDAGQFLCPAKKNITNLKICVHQKHVC 598
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C T RG C C G N NK C D D
Sbjct: 599 DGQNDCPLGEDEVNCPVEQKCPEPKQCEQLCIRTARGRDECACRLGYLMNTNKRNCTDID 658
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+VCSC GY LRPD ++C A+ +++ ++ DIR
Sbjct: 659 ECQYLTSPVCSQKCHNTMGSFVCSCEMGYILRPDLRTCKALG----GAMTLLVANRWDIR 714
Query: 476 RIHLN 480
R+ L+
Sbjct: 715 RVTLS 719
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G +R + +K + WP+ L IDY+Q LY+ D T+E++ DGS V
Sbjct: 1156 IERANMDGASRVIIASKKLIWPNGLAIDYDQHKLYFVDGGTKTLENMNFDGSSRKVIING 1215
Query: 164 LCHPNEL 170
L HP L
Sbjct: 1216 LGHPFGL 1222
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----N 161
++E+A M G R +++K + WP+ L IDY +YW D+ + +E +DGS +
Sbjct: 841 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECSNLDGSERIKVLS 900
Query: 162 AVLCHPNEL 170
+ L HP L
Sbjct: 901 SHLPHPFAL 909
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN---- 161
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+
Sbjct: 1458 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1517
Query: 162 AVLCHPNELRCGS 174
+ L HP L S
Sbjct: 1518 SALHHPYALALTS 1530
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 48 FKRILNGTH-TLALEFNHRNQSLCF--IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+ I+ G H +AL+F++R + + + + V + ++ D++ W L +P +
Sbjct: 723 YMAIVKGLHNAIALDFHYRKGMMFWSDVSTDVIKMVYVNGTRVRDVI-KWGLESPGGIAV 781
Query: 105 D-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-T 150
D R+E A G R+ +V+ ++ P ++VI + +++W D N
Sbjct: 782 DWVHDLLFWTDSGTRRVEVANFQGNLRTVIVSSDLDKPRAIVIHPGEALVFWSDWGPNPK 841
Query: 151 VESVRVDGSHNAVLCH-----PNELRCGSSNQCVALSKFCDGKPDCSN 193
+E +DGS V+ PN L N + + +CSN
Sbjct: 842 IERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECSN 889
>gi|297471752|ref|XP_002685444.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Bos taurus]
gi|296490549|tpg|DAA32662.1| TPA: low density lipoprotein receptor related protein-deleted in
tumor-like [Bos taurus]
Length = 4375
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/403 (31%), Positives = 170/403 (42%), Gaps = 101/403 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C+A C QFSCG G+CIP +W
Sbjct: 920 CPDDQFKC-KNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCEVDQFSCGNGRCIPRAW 978
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 979 LCDREDDCGDHTDEIASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1038
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
CF+ Q C+ S +CIP +W CD + DC D ++ T E+ C + QC
Sbjct: 1039 SCFDNQFSCS-SGRCIPGHWACDGDNDCGDFSDEINCTREEIHSPAGCNANEFQCHPDGN 1097
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCD 361
CIP W CD E DC D +DE K + LC H + C S+ +C++ + CD
Sbjct: 1098 CIPDVWHCDGEKDCE-----DGSDE---KGCNGTLRLCDHKTKFSCRSTGRCISKAWVCD 1149
Query: 362 GKPDCSNGEDE--------GP-----------------FCNNKADC-------------- 382
G DC + DE GP CN + DC
Sbjct: 1150 GDIDCEDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRWDCPDGSDEGDLCDECS 1209
Query: 383 -ENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CS+ CS P RG +C CP G NKT C D C C Q C +
Sbjct: 1210 LNNGGCSNHCSVVPGRGIVCSCPEGLQLGRDNKT-CEIVDYCSNHLKCSQVCEQHKQTVK 1268
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
CSC EG+ L DG+SC++V+ + A IIFS +IR+I L+
Sbjct: 1269 CSCYEGWKLDVDGQSCSSVDPFE---AFIIFSIRHEIRKIDLH 1308
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C N + C +N+C+ LS+ C+G DC +G DEG C +C+ L C HKC+
Sbjct: 111 CPWNHIACLGANKCIHLSQLCNGVLDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRNST 170
Query: 399 MCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
MC+C G + C D DEC I G+C Q+C NT+ SY CSC EGY ++PD +SC A
Sbjct: 171 MCYCEDGFEIKEDGRSCKDQDECAIYGTCSQSCVNTYGSYACSCVEGYIMQPDNRSCKAK 230
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D+P ++ +++ I +LNGS
Sbjct: 231 NEPTDKPPLLLIANSETIEIFYLNGS 256
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 121/401 (30%), Positives = 172/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2675 IRCNSTSLCVLPAWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2734
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC +D +D +D
Sbjct: 2735 QKDC-EDGLDEFH-CDASCSWNQFACS-TEKCISKHWICDGEDDC--EDGLDESDSICGT 2789
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S+ C+P +WLCD E DC ST N D + + HN V
Sbjct: 2790 I-TCAADMFSCQGSRACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 2847
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ +++ CDG DC++ D
Sbjct: 2848 CIPKQFVCDHDDDCGDGSDESLQCGYRQCNAEEFSCADGRCLLNTQWQCDGDFDCTDHSD 2907
Query: 372 EGP-----------------------------FCNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 2908 EAPINPKCKSAEQSCNSSFFMCKNGRCIPSGALCDNKDDCGDGSDERNCHINECLSKKVS 2967
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 2968 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 3026
Query: 443 GYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++P + C +++ DE +I + +IR+I +GS
Sbjct: 3027 GYEIQPANPNGCKSLS---DEEPFLILADHHEIRKISTDGS 3064
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 148/371 (39%), Gaps = 91/371 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3563 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKNCE 3619
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3620 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKAHCI 3677
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3678 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 3727
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 3728 DDCGDNSDEAPDMCDKFLCPPTRPHRCRNNRICLQPEQMCNGIDDCGDNSDEDPCGGKLT 3787
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNN 378
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3788 YKARPCKKDEFAC-SNKKCIPVDLQCDQLDDCGDGSDEQGCRITPSEYTCEDNVNP-CGD 3845
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C +K S C C G +N QC D +ECL+ G+C C NT SY
Sbjct: 3846 DAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINTEGSY 3896
Query: 437 VCSCTEGYTLR 447
C C + + R
Sbjct: 3897 KCVCHQNFQER 3907
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3348 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3406
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3407 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDEK 3460
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3461 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3510
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3511 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3538
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCDG DC +
Sbjct: 3554 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCISAKWKCDGHEDC-KY 3611
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 3612 GEDEKNCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 3664
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 3665 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 3715
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 3716 LCKLHFWVCDGEDDCGDNSDEAP 3738
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3388 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3446
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3447 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3500
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3501 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3549
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3550 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3577
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3426 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 3485
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3486 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3538
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3539 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3586
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3587 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 3615
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 110/401 (27%), Positives = 154/401 (38%), Gaps = 129/401 (32%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT------------------ 206
C E RC + C+ S C+ DC++ DE N +CT
Sbjct: 2622 CAAVEFRC-TDGMCIPRSARCNQNIDCADASDEKNCNNTDCTYFYKLGVKTTGFIRCNST 2680
Query: 207 -------------------------PGQ---------FSCGMGKCIPESWKCDGFVDCLE 232
P Q F C G+CI +W CDG DC E
Sbjct: 2681 SLCVLPAWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDGQKDC-E 2739
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
DG DE + C C Q C+ ++KCI +W+CD E DC +D +D +D C
Sbjct: 2740 DGLDEFH-CDASCSWNQFACS-TEKCISKHWICDGEDDC--EDGLDESDSICGTI-TCAA 2794
Query: 293 GQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVLCHPNE- 344
C S+ C+P +WLCD E DC ST N D + + HN V C P +
Sbjct: 2795 DMFSCQGSRACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV-CIPKQF 2853
Query: 345 ---------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGEDEGPF-- 375
L+CG + +C+ +++ CDG DC++ DE P
Sbjct: 2854 VCDHDDDCGDGSDESLQCGYRQCNAEEFSCADGRCLLNTQWQCDGDFDCTDHSDEAPINP 2913
Query: 376 --------CNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDA--------DE 418
CN+ C+N +C P GA+C NK C D +E
Sbjct: 2914 KCKSAEQSCNSSFFMCKNGRC------IPSGALC-------DNKDDCGDGSDERNCHINE 2960
Query: 419 CLID--GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
CL C Q C + +SY C C G+ L+ DGK+C ++
Sbjct: 2961 CLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKDDGKTCVDID 3001
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 127/339 (37%), Gaps = 90/339 (26%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC C Q C + +CIP
Sbjct: 917 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCEVDQFSCG-NGRCIP 975
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD+I T E +F
Sbjct: 976 RAWLCDREDDCGDHTDEIASCEFPTCEPLTQFICKSGRCISSKWHCDSDDDCGDGSDEVG 1035
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNE 344
H CF+ Q C+ S +CIP +W CD + DC D ++ T E+ H+ C+ NE
Sbjct: 1036 CVHSCFDNQFSCS-SGRCIPGHWACDGDNDCGDFSDEINCTREE-----IHSPAGCNANE 1089
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNNKA------------------ 380
+C C+ CDG+ DC +G DE C++K
Sbjct: 1090 FQCHPDGNCIPDVWHCDGEKDCEDGSDEKGCNGTLRLCDHKTKFSCRSTGRCISKAWVCD 1149
Query: 381 ------------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC- 419
DC+N C P ++C P + C D DEC
Sbjct: 1150 GDIDCEDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRWDCPDGSDEGDLCDECS 1209
Query: 420 LIDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
L +G C C+ VCSC EG L D K+C V+
Sbjct: 1210 LNNGGCSNHCSVVPGRGIVCSCPEGLQLGRDNKTCEIVD 1248
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 3467 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 3526
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 3527 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 3578
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CI W CD DC + N + + C +E
Sbjct: 3579 NCETSCSKDQFQCS-NGQCISAKWKCDGHEDCKYGEDEKNCEP--------ASPTCSSSE 3629
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 3630 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCRNKAHCIPIRWLC 3683
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV SK CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2594 RCVPHSKLCDGENDCGDNSDELDCKVSTCAAVEFRCTDGMCIPRSARCNQNIDC-ADASD 2652
Query: 237 EPN------TCIHQC---FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N T ++ G ++C + C+ W+CD DC D D
Sbjct: 2653 EKNCNNTDCTYFYKLGVKTTGFIRCNSTSLCVLPAWICDGSNDCG--DYSDELKCPVQNK 2710
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2711 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------FHCDASCSWNQFAC 2758
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + S C P
Sbjct: 2759 -STEKCISKHWICDGEDDCEDGLDESDSICGTITCAADMFSCQGSRACVPRHWLCDGERD 2817
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2818 CPNGSDELSTAGCAPNNT 2835
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 135/366 (36%), Gaps = 101/366 (27%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3154 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3213
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3214 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3265
Query: 190 DC------SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD--------CLEDG- 234
++G D N+ P+ +K ++ L G
Sbjct: 3266 KSLSRAHKTSGADRLSLINSWHAITDIQVYHSYRQPDVFKHLCTINNGGCSHLCLLAPGK 3325
Query: 235 ------------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
+ + TC+ C Q +C + KCIP W CD DC
Sbjct: 3326 SHTCACPTNFYLAADNRTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEPDDCP 3384
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+D DN+DE H C +GQ +C ++KCIP N
Sbjct: 3385 EFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVN 3444
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
C+ + DC DE+ +K N+ C P+ +C ++ C++ CD PDC+
Sbjct: 3445 LRCNGQDDCG--------DEEDEKDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCA 3494
Query: 368 NGEDEG 373
+ DE
Sbjct: 3495 DASDEA 3500
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++C+PH+ LCD E
Sbjct: 2546 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCVPHSKLCDGE 2605
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +C CIP + C++ +DC+ N +
Sbjct: 2606 NDCG-----DNSDELDCKVSTCAAVEFRCT-DGMCIPRSARCNQNIDCADASDEKNCNNT 2659
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
YF V +RC S++ CV + CDG DC + DE LKC
Sbjct: 2660 DCTYFYKLGVKT-TGFIRCNSTSLCVLPAWICDGSNDCGDYSDE------------LKCP 2706
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 2707 VQNKHKCEENYFG----CPSGRCILNTWVCDGQKDCEDGLDEFHCDASCS 2752
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+EKA M G NR VT + WP+ L +D++ LYWCD++ + +E V ++G+H ++
Sbjct: 709 RIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIEKVFLNGTHRKIVYS 768
Query: 167 PNEL 170
EL
Sbjct: 769 GKEL 772
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + V
Sbjct: 4083 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVVSVTS 4142
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4143 KQGLLHPHRIDVFEDYIYGAGPKNGVFRVQKFGHG 4177
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1080 HSPAGCNANEFQCHPDGNCIPDVWHCDGEKDCEDGSDEKG-CNGTLRLCDHKTKFSCRST 1138
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 1139 GRCISKAWVCDGDIDC-EDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRWDC 1195
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 32/54 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ KA + G + LV+ I WP+ + ID+ ++ LYWCD+ + +E + ++ N
Sbjct: 2053 IGKARLDGSEKVVLVSMGIAWPNGISIDFEENKLYWCDARTDKIERIDLETGGN 2106
>gi|443714071|gb|ELU06639.1| hypothetical protein CAPTEDRAFT_220131 [Capitella teleta]
Length = 1785
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/324 (34%), Positives = 147/324 (45%), Gaps = 78/324 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGK-CIPES 221
C ++ C S+ CV L CD DCS+G DE + EC Q CG GK CI
Sbjct: 168 CGEDQFAC-SAGGCVDLEWHCDKDIDCSDGSDEENCGDDAVECDEDQMMCGDGKKCILHV 226
Query: 222 WKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CDG +C D SDE N H C +G+ QC ++ CI W CD + DC D
Sbjct: 227 YVCDGDNNC-GDWSDEQNCNRPRHNCTSGEFQC-INGDCINSAWHCDGDFDCG-----DQ 279
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C GQ QC + +CI +W CD E DCS DN+DE+
Sbjct: 280 SDEYECDKPLCTEGQFQCH-TGRCIYGSWRCDGEYDCS-----DNSDEE----------G 323
Query: 340 CHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
C E++C N C+A+ K CDG DC G DE H C
Sbjct: 324 CQDEEMQCAEGQFKCDDNSCIAIGKVCDGHQDCEGGADE----------------HLC-- 365
Query: 394 TPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+ +EC DGSC Q C NT SY CSC +GY LRPDG++C
Sbjct: 366 ---------------------NLNECEFDGSCSQNCVNTEGSYRCSCVQGYDLRPDGRTC 404
Query: 454 TAVNVPQDEPASIIFSSTVDIRRI 477
A+ EP +IF++ +DIR++
Sbjct: 405 KALG---GEPY-LIFANRIDIRKL 424
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/161 (38%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA---ECTPGQFSCGMGKC 217
+AV C +++ CG +C+ CDG +C + DE CN CT G+F C G C
Sbjct: 205 DAVECDEDQMMCGDGKKCILHVYVCDGDNNCGDWSDE-QNCNRPRHNCTSGEFQCINGDC 263
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
I +W CDG DC D SDE C GQ QC + +CI +W CD E DCS
Sbjct: 264 INSAWHCDGDFDC-GDQSDEYECDKPLCTEGQFQCH-TGRCIYGSWRCDGEYDCS----- 316
Query: 278 DNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
DN+DE+ D+ QC GQ +C CI +CD DC
Sbjct: 317 DNSDEEGCQDEEMQCAEGQFKCD-DNSCIAIGKVCDGHQDC 356
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++E+AGM G RS LV NI WP+ L IDY LYW D+ +E+ +DG+ +V+
Sbjct: 856 KIERAGMDGSQRSVLVEHNITWPNGLAIDYGSGRLYWVDAAEKRIEACNLDGTQRSVILS 915
Query: 166 ----HPNEL 170
HP L
Sbjct: 916 EGLQHPFSL 924
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN----A 162
++EKA + G +R +V +++ WP+ L IDY D LYW D++L+ +E+ ++G H A
Sbjct: 1429 KIEKAFLDGSSRHTVVQESLVWPNGLCIDYEADRLYWVDANLDCIETSDLNGGHRAKLAA 1488
Query: 163 VLCHPNEL 170
V+ HP L
Sbjct: 1489 VVQHPFSL 1496
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ + ++E+ M G++R + +++ WP+ L +DY LYW D+ + +E +DG++
Sbjct: 544 WGMQPKIERCSMDGQDRRVIAHRSLFWPNGLALDYAGSKLYWVDAKHHVIECADLDGANR 603
Query: 162 AVL 164
+
Sbjct: 604 KTV 606
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+E+A M G NR L+ N+ WP+ + +D + W D+ +E GS +L
Sbjct: 1168 RIERADMDGNNRMTLIKDNLGWPNGITVDRPTSRIIWNDAKTEVIECSDFSGSERRLLVN 1227
Query: 166 ---HPNEL 170
HP L
Sbjct: 1228 AVPHPYGL 1235
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A ++G +V ++ + +D+ D LYW D+ NT+E R+DGS +L
Sbjct: 1343 IRRASLNGSFSEVVVDADLSTADGIAVDWLADNLYWTDTGRNTIEVTRLDGSSRRILVSR 1402
Query: 168 N 168
N
Sbjct: 1403 N 1403
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+G C C Y C+C G+ L PD KSCT ++ ++FS DIR+I +
Sbjct: 678 NGECSHLCLPNLTGYTCACPTGFLLLPDSKSCT-----ENLHNFLLFSRRTDIRQISFDT 732
Query: 482 S 482
S
Sbjct: 733 S 733
>gi|47213812|emb|CAF92585.1| unnamed protein product [Tetraodon nigroviridis]
Length = 825
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/337 (32%), Positives = 156/337 (46%), Gaps = 39/337 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A C +E +C ++ QC++ S CD DCS+G DE C+ F C C+P
Sbjct: 91 TAKQCKEDEFQC-ANGQCISASFVCDEDNDCSDGSDEASCPKPTCSSRSFQCNNSVCVPA 149
Query: 221 SWKCDGFVDCLEDGSDE-PNTC-------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
W+CDG DC DGSDE P C +C + + QCA +CI +W CD +DC
Sbjct: 150 RWRCDGDRDC-ADGSDEWPENCEGRQNKPAPRCRSHEFQCA-DGECIHSSWRCDGGVDCK 207
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE C Q +C L CI CD DC+ D++DE
Sbjct: 208 -----DRSDEANCSRPACSQDQFRC-LDGACIAGALQCDGMRDCT-----DHSDE----L 252
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSH 389
H C P +C + +C+++ K C+ + DC + DE + +C+ N CSH
Sbjct: 253 DCHKVKACEGPTMFKC-RTGECISMEKVCNKQADCRDSSDEPARECDIDECQVDNGGCSH 311
Query: 390 KCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
CS G C CP G + +K C D DEC +C Q C N SY C C EGY +
Sbjct: 312 NCSDLKVGFNCSCPTGYSLKMDKKTCEDIDECAEPDTCSQICINLAGSYKCDCLEGYQID 371
Query: 448 PDGKSCTAVN--VPQDEPASIIFSSTVDIRRIHLNGS 482
P K+C A VP + F++ ++RR+ L+ S
Sbjct: 372 PLTKTCKAQAGVVPM-----LYFTNKHEVRRMTLDRS 403
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 148/345 (42%), Gaps = 62/345 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNAECTPGQFSCG--MGKC 217
A C ++ CG+ +C+ CD DC +G DE + C +SCG + +C
Sbjct: 10 AFTCSSSQFMCGNG-RCITRRWICDETDDCGDGTDELLETCASKTCMQSDYSCGAPLYQC 68
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
IP W CDG DC ++ +DE N QC + QCA + +CI +++CDE+ DCS
Sbjct: 69 IPGRWHCDGKADC-DNEADEKNCTAKQCKEDEFQCA-NGQCISASFVCDEDNDCS----- 121
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C + QC S C+P W CD + DC+ D D E+ + + A
Sbjct: 122 DGSDEASCPKPTCSSRSFQCNNS-VCVPARWRCDGDRDCA--DGSDEWPENCEGRQNKPA 178
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------------GPF 375
C +E +C + +C+ S CDG DC + DE G
Sbjct: 179 PRCRSHEFQC-ADGECIHSSWRCDGGVDCKDRSDEANCSRPACSQDQFRCLDGACIAGAL 237
Query: 376 -CNNKADC----ENLKCSHKCSPTPRGAMCFCPAGQ-----------------NPNKTQC 413
C+ DC + L C HK M C G+ + +
Sbjct: 238 QCDGMRDCTDHSDELDC-HKVKACEGPTMFKCRTGECISMEKVCNKQADCRDSSDEPARE 296
Query: 414 VDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
D DEC +D G C C++ + + CSC GY+L+ D K+C ++
Sbjct: 297 CDIDECQVDNGGCSHNCSDLKVGFNCSCPTGYSLKMDKKTCEDID 341
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++EK G++G +R LVT NI WP+ + +D + LYW DS L+T+ S+ V+G
Sbjct: 527 KIEKCGLNGVDRFALVTDNIVWPNGITLDVTNNRLYWVDSKLHTLSSIDVNG 578
>gi|14718545|gb|AAK72954.1|AF355595_1 lipophorin receptor [Aedes aegypti]
Length = 1156
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 119/335 (35%), Positives = 154/335 (45%), Gaps = 44/335 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWK 223
C +E C ++ +C+ CD DC + DE C P QF+C CI W+
Sbjct: 214 CRSDEFTC-ANGRCIQKRWQCDRDDDCGDNSDEKGCQATTCDPLKQFACSENYCITSKWR 272
Query: 224 CDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD- 275
CDG DC DGSDE P T ++ C + + QC+ CI +W+CD E DC D
Sbjct: 273 CDGEPDC-PDGSDERGCTNPTPPT-VNPCLSLEYQCSDRITCIHKSWICDGEKDCPQGDD 330
Query: 276 ----IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWD 330
I N C Q QC K CI ++ C+ + +CS D +DE D +
Sbjct: 331 EMPPICQNV--------TCRPDQFQCKKDKTCINGHFHCNGKPECS-----DGSDEVDCE 377
Query: 331 KYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC 387
+ AV C+P E CG C+ LSK CD KPDC +DE K +C N C
Sbjct: 378 R----PAVKCNPKTEFDCGGG-MCIPLSKVCDKKPDCPEFQDEPNDKCGKNECLENNGGC 432
Query: 388 SHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
SH C TP G C C P + N C D DEC GSC Q CTN + C C GY
Sbjct: 433 SHLCVDTPAGFYCDCKPGYKLVNNRTCEDIDECAEAGSCSQKCTNEIGTSKCECMPGYLR 492
Query: 447 RP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P D C A + AS++F+ DIR+I L+
Sbjct: 493 DPRDHTKCKAT----EGHASLLFARRHDIRKISLD 523
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 106/221 (47%), Gaps = 30/221 (13%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGK 216
+ + C + RC + C+ +S CDG+ DCS+G DE C+ +F C G+
Sbjct: 86 STLQCSERQFRC-NDGHCIHVSFVCDGEADCSDGSDEHSRECKVTETNCSDDKFRCKSGR 144
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDC-- 271
CIP+ W+CDG DC DGSDE + C + + C + + CIP W+CD+ DC
Sbjct: 145 CIPKHWQCDGENDC-SDGSDEDSEKCQSKVCSSEEFTCRSGTGTCIPLAWMCDQNRDCPD 203
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+D++ N D+F C NG +CI W CD + DC DN+DE
Sbjct: 204 GSDEMSCNETCRSDEF-TCANG--------RCIQKRWQCDRDDDCG-----DNSDEK--- 246
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
A C P + S N C+ CDG+PDC +G DE
Sbjct: 247 --GCQATTCDPLKQFACSENYCITSKWRCDGEPDCPDGSDE 285
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----------- 106
LA+++ + + I++ + + +L DL P LD
Sbjct: 584 LAVDWIYNHIYFTDIKKATIELTNFD-GNMGKILIKDDLEIPRAIALDPIDGWMYWTDWG 642
Query: 107 ---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+AGM G +R +VT ++WP+ + +D + +YW D+ LNT+ S DGS V
Sbjct: 643 TTPRIERAGMDGTHRQVIVTYEVKWPNGITLDLVRKRVYWVDAKLNTISSCDYDGSKRTV 702
Query: 164 LCH 166
+ +
Sbjct: 703 VLY 705
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCGMGKCIP 219
V C P++ +C C+ C+GKP+CS+G DE +C P +F CG G CIP
Sbjct: 339 VTCRPDQFQCKKDKTCINGHFHCNGKPECSDGSDEVDCERPAVKCNPKTEFDCGGGMCIP 398
Query: 220 ESWKCDGFVDCLEDGSDEPN 239
S CD DC E DEPN
Sbjct: 399 LSKVCDKKPDCPE-FQDEPN 417
>gi|270016569|gb|EFA13015.1| hypothetical protein TcasGA2_TC001981 [Tribolium castaneum]
Length = 840
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 159/365 (43%), Gaps = 64/365 (17%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +E C S S +CV L+ CD PDCS+G DE CN C +F+C GKCI + W
Sbjct: 68 VCGVDEFTCRSASGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCKNGKCIQKRW 126
Query: 223 KCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CD DC D SDE P TC + + QCA CI W CD E DC VD
Sbjct: 127 VCDLDNDC-GDNSDEKDCPPVTCAP---DSEFQCA-ENFCITSKWRCDGEYDC-----VD 176
Query: 279 NTDEDW-----DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD----- 326
DE C + + +C CI WLCD DC +D+ DN
Sbjct: 177 GKDEQGCPKMATSSSFCLSEEYECGDHLTCIHKGWLCDGTRDCPDGSDESPDNCQNITCR 236
Query: 327 ------EDWDKYFSHNAVLCHP------NELRCGS--------------SNQCVALSKFC 360
+D H HP +EL CGS C+ LS+ C
Sbjct: 237 ADQFQCKDRSCIAGHLHCSGHPECPDGSDELNCGSPAPKCDPKTEFDCGGGNCIPLSQVC 296
Query: 361 DGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
D + C +GEDE G N+ + N CS +C TP C C G N+T C D
Sbjct: 297 DKRQHCPDGEDEPVGRCGINECNENNGGCSQRCVDTPSSFYCDCNHGYKLVDNRT-CKDI 355
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIR 475
+EC I GSC Q C N + C C GY P D C A+ + AS++F+ DIR
Sbjct: 356 NECEIPGSCSQICINDKGGFKCDCQSGYMRDPRDLTKCKAI----EGHASLLFARRRDIR 411
Query: 476 RIHLN 480
+I L+
Sbjct: 412 KISLD 416
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 143/346 (41%), Gaps = 70/346 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSC--GMGKCIPE 220
C NE RC SS +C+ CD + DC++G DE C +F+C G+C+P
Sbjct: 28 CEKNEFRC-SSGRCIPAHWQCDHEQDCNDGSDEDEHVCQQKVCGVDEFTCRSASGECVPL 86
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W CD DC DGSDE C C + + C + KCI W+CD + DC DN+
Sbjct: 87 TWMCDDNPDC-SDGSDE-KACNETCRSDEFTCK-NGKCIQKRWVCDLDNDCG-----DNS 138
Query: 281 DE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE D + + QCA CI W CD E DC VD DE + ++
Sbjct: 139 DEKDCPPVTCAPDSEFQCA-ENFCITSKWRCDGEYDC-----VDGKDEQGCPKMATSSSF 192
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------- 374
C E CG C+ CDG DC +G DE P
Sbjct: 193 CLSEEYECGDHLTCIHKGWLCDGTRDCPDGSDESPDNCQNITCRADQFQCKDRSCIAGHL 252
Query: 375 FCNNKADC----ENLKC---SHKCSP-----------TPRGAMC----FCPAGQNPNKTQ 412
C+ +C + L C + KC P P +C CP G++ +
Sbjct: 253 HCSGHPECPDGSDELNCGSPAPKCDPKTEFDCGGGNCIPLSQVCDKRQHCPDGEDEPVGR 312
Query: 413 CVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C +EC +G C Q C +T S+ C C GY L D ++C +N
Sbjct: 313 C-GINECNENNGGCSQRCVDTPSSFYCDCNHGYKL-VDNRTCKDIN 356
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAV 163
D ++E++GM G +R +VT +++WP+ L +D + +YW D+ LN + S +G + +
Sbjct: 537 DPKIERSGMDGSHRQAIVTYDVKWPNGLTLDLVKKRVYWVDAKLNVISSCDYNGRNRRLI 596
Query: 164 LCHPNELR 171
L P+ LR
Sbjct: 597 LFSPDSLR 604
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL-----------DERLEKAGM-HG 115
SL F +++++ + L ++ ++N + F D+++ KA + G
Sbjct: 401 SLLFARRRDIRKISLDHHEMTSIVNETNSATALDFVFRTGMIFWSDVTDKKIYKAPIDEG 460
Query: 116 ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RS +++ +I L +D+ + +YW D+ NT+E DG VL
Sbjct: 461 NERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIELANFDGKMRKVL 509
>gi|426337326|ref|XP_004032660.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Gorilla gorilla gorilla]
Length = 867
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/294 (34%), Positives = 136/294 (46%), Gaps = 33/294 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCA 253
C C QF C G+CIP W CDG DC + + C + C + QC
Sbjct: 127 CVHSCFDNQFRCSSGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIRSPAGCNGNEFQCH 186
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWLC 310
C+P W CD E DC D +DE C + C + +CI W+C
Sbjct: 187 PDGNCVPDLWRCDGEKDCE-----DGSDEKGCDGTIRSCDHKTKFSCWSTGRCINKAWVC 241
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNG 369
D ++DC D +DED ++ LC P + C + ++ C+ K C+GK DC +G
Sbjct: 242 DGDIDCE-----DQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDG 291
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCD 426
DEG C+ + N CS+ CS P RG +C CP G NK C D C C
Sbjct: 292 SDEGDLCD-ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCS 350
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 351 QVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 401
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 124/334 (37%), Gaps = 85/334 (25%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C G+F C CI WKCDG DCL+ ++ C C Q C + +CIP WL
Sbjct: 12 CKAGEFRCKNRHCIQARWKCDGDDDCLDGSDEDSVNCSRTCQVDQFSCG-NGRCIPRAWL 70
Query: 265 CDEEMDCS--TDDIVD---NTDEDWDKF------------------------------HQ 289
CD E DC TD++ T E +F H
Sbjct: 71 CDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVHS 130
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
CF+ Q +C+ S +CIP +W CD + DC D D + K + C+ NE +C
Sbjct: 131 CFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIRSPAGCNGNEFQCHP 187
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA--------- 380
CV CDG+ DC +G DE C NKA
Sbjct: 188 DGNCVPDLWRCDGEKDCEDGSDEKGCDGTIRSCDHKTKFSCWSTGRCINKAWVCDGDIDC 247
Query: 381 -------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-LIDGS 424
DC++ C P ++C P K C D DEC L +G
Sbjct: 248 EDQSDEDDCDSFLCGPPKYPCANDTSVCLQPEKLCNGKKDCPDGSDEGDLCDECSLNNGG 307
Query: 425 CDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
C C+ VCSC EG L D K+C V+
Sbjct: 308 CSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 341
>gi|91094773|ref|XP_967944.1| PREDICTED: similar to lipophorin receptor [Tribolium castaneum]
Length = 894
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 125/365 (34%), Positives = 159/365 (43%), Gaps = 64/365 (17%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +E C S S +CV L+ CD PDCS+G DE CN C +F+C GKCI + W
Sbjct: 146 VCGVDEFTCRSASGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCKNGKCIQKRW 204
Query: 223 KCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CD DC D SDE P TC + + QCA CI W CD E DC VD
Sbjct: 205 VCDLDNDC-GDNSDEKDCPPVTCAP---DSEFQCA-ENFCITSKWRCDGEYDC-----VD 254
Query: 279 NTDEDW-----DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD----- 326
DE C + + +C CI WLCD DC +D+ DN
Sbjct: 255 GKDEQGCPKMATSSSFCLSEEYECGDHLTCIHKGWLCDGTRDCPDGSDESPDNCQNITCR 314
Query: 327 ------EDWDKYFSHNAVLCHP------NELRCGS--------------SNQCVALSKFC 360
+D H HP +EL CGS C+ LS+ C
Sbjct: 315 ADQFQCKDRSCIAGHLHCSGHPECPDGSDELNCGSPAPKCDPKTEFDCGGGNCIPLSQVC 374
Query: 361 DGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
D + C +GEDE G N+ + N CS +C TP C C G N+T C D
Sbjct: 375 DKRQHCPDGEDEPVGRCGINECNENNGGCSQRCVDTPSSFYCDCNHGYKLVDNRT-CKDI 433
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIR 475
+EC I GSC Q C N + C C GY P D C A+ + AS++F+ DIR
Sbjct: 434 NECEIPGSCSQICINDKGGFKCDCQSGYMRDPRDLTKCKAI----EGHASLLFARRRDIR 489
Query: 476 RIHLN 480
+I L+
Sbjct: 490 KISLD 494
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 143/346 (41%), Gaps = 70/346 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSC--GMGKCIPE 220
C NE RC SS +C+ CD + DC++G DE C +F+C G+C+P
Sbjct: 106 CEKNEFRC-SSGRCIPAHWQCDHEQDCNDGSDEDEHVCQQKVCGVDEFTCRSASGECVPL 164
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W CD DC DGSDE C C + + C + KCI W+CD + DC DN+
Sbjct: 165 TWMCDDNPDC-SDGSDE-KACNETCRSDEFTCK-NGKCIQKRWVCDLDNDCG-----DNS 216
Query: 281 DE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE D + + QCA CI W CD E DC VD DE + ++
Sbjct: 217 DEKDCPPVTCAPDSEFQCA-ENFCITSKWRCDGEYDC-----VDGKDEQGCPKMATSSSF 270
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------- 374
C E CG C+ CDG DC +G DE P
Sbjct: 271 CLSEEYECGDHLTCIHKGWLCDGTRDCPDGSDESPDNCQNITCRADQFQCKDRSCIAGHL 330
Query: 375 FCNNKADC----ENLKC---SHKCSP-----------TPRGAMC----FCPAGQNPNKTQ 412
C+ +C + L C + KC P P +C CP G++ +
Sbjct: 331 HCSGHPECPDGSDELNCGSPAPKCDPKTEFDCGGGNCIPLSQVCDKRQHCPDGEDEPVGR 390
Query: 413 CVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C +EC +G C Q C +T S+ C C GY L D ++C +N
Sbjct: 391 C-GINECNENNGGCSQRCVDTPSSFYCDCNHGYKLV-DNRTCKDIN 434
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAV 163
D ++E++GM G +R +VT +++WP+ L +D + +YW D+ LN + S +G + +
Sbjct: 615 DPKIERSGMDGSHRQAIVTYDVKWPNGLTLDLVKKRVYWVDAKLNVISSCDYNGRNRRLI 674
Query: 164 LCHPNELR 171
L P+ LR
Sbjct: 675 LFSPDSLR 682
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 31/209 (14%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESW-----------KCDGFVDCLEDGSDEPNTCIHQCFN 247
P C+ QF+C KCIP S+ +G +C + E +T +
Sbjct: 8 PSYAVACSIRQFACANKKCIPISYVCDGDDDCEDGSDEGVKECPKHQEPEYSTSTLKFLT 67
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
V C + + + + + + + +K C + +C+ S +CIP +
Sbjct: 68 TLVVC--TSIIVTMDLILKIAIVALLNVYAVTALVEENK--TCEKNEFRCS-SGRCIPAH 122
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDC 366
W CD E DC+ D +DE D++ V C +E C S S +CV L+ CD PDC
Sbjct: 123 WQCDHEQDCN-----DGSDE--DEHVCQQKV-CGVDEFTCRSASGECVPLTWMCDDNPDC 174
Query: 367 SNGEDEGPFCN-----NKADCENLKCSHK 390
S+G DE CN ++ C+N KC K
Sbjct: 175 SDGSDEKA-CNETCRSDEFTCKNGKCIQK 202
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL-----------DERLEKAGM-HG 115
SL F +++++ + L ++ ++N + F D+++ KA + G
Sbjct: 479 SLLFARRRDIRKISLDHHEMTSIVNETNSATALDFVFRTGMIFWSDVTDKKIYKAPIDEG 538
Query: 116 ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RS +++ +I L +D+ + +YW D+ NT+E DG VL
Sbjct: 539 NERSVVISNDITTSDGLAVDWIYNHIYWTDTGKNTIELANFDGKMRKVL 587
>gi|67845965|dbj|BAE00010.1| Lipophorin receptor [Rhyparobia maderae]
Length = 907
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/370 (32%), Positives = 161/370 (43%), Gaps = 74/370 (20%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI---- 218
+C P E C + +CV+L+ CD DCS+G DE CN C +F+CG GKCI
Sbjct: 107 VCSPEEFTCRAMPGECVSLTWMCDDNQDCSDGSDEKA-CNETCRSDEFTCGNGKCIQKRW 165
Query: 219 -----------------------PES-------------WKCDGFVDCLEDGSDEPN--- 239
PE+ W+CDG DC DGSDE
Sbjct: 166 VCDRDDDCGDGSDERDCPSTPCNPETEFNCSENFCITSRWRCDGDADC-HDGSDEIGCTD 224
Query: 240 --TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQV 295
T C + +C C+ +W+CD + DC +DE + H C Q
Sbjct: 225 RPTHTSHCLPREFECEDRLTCVHQSWVCDGDKDCP-----GGSDESITRCHNVTCRPDQF 279
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC ++ CIP + C +C D +DE+ S E CG C+
Sbjct: 280 QCR-NRACIPGHLHCSGHAECP-----DESDEE--NCTSPVPKCDQRTEFECGGG-MCIP 330
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN--PNKT 411
LSK CD KPDC N EDE K +C N CS KC+ TP G C C G NKT
Sbjct: 331 LSKVCDKKPDCPNWEDEPGDKCGKNECLENNGGCSQKCADTPGGYYCDCLHGYKLMDNKT 390
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSS 470
C D +EC G+C QTC N ++ C C EGY P + C A+ + AS++F+
Sbjct: 391 -CEDVNECDSPGACSQTCINEKGTFKCQCVEGYLRDPRNHTRCKAM----EGHASLLFAR 445
Query: 471 TVDIRRIHLN 480
DIR+I L+
Sbjct: 446 RHDIRKISLD 455
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 151/387 (39%), Gaps = 108/387 (27%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE--CTPGQFSCGMGKCIPE 220
+C + RC ++ +C+ L+ C+G DC + DE P C+ C+ +F C G+CIP
Sbjct: 24 VCSLRQFRC-NNGRCIPLTWTCEGDDDCGDNSDETSPECDVSRTCSETEFKCNNGRCIPV 82
Query: 221 SWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDD 275
W+CD DC DGSDE P+ C + C + C A+ +C+ W+CD+ DCS +D+
Sbjct: 83 HWQCDNEKDC-SDGSDEIPSVCQVKVCSPEEFTCRAMPGECVSLTWMCDDNQDCSDGSDE 141
Query: 276 IVDNTDEDWDKFHQCFNG---------------------------------QVQCALSKK 302
N D+F C NG + C+
Sbjct: 142 KACNETCRSDEF-TCGNGKCIQKRWVCDRDDDCGDGSDERDCPSTPCNPETEFNCS-ENF 199
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
CI W CD + DC D +DE D + SH C P E C CV S
Sbjct: 200 CITSRWRCDGDADCH-----DGSDEIGCTDRPTHTSH----CLPREFECEDRLTCVHQSW 250
Query: 359 FCDGKPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC-S 392
CDG DC G DE C+ A+C + C S
Sbjct: 251 VCDGDKDCPGGSDESITRCHNVTCRPDQFQCRNRACIPGHLHCSGHAECPDESDEENCTS 310
Query: 393 PTPR----------GAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCT 430
P P+ G MC CP ++ +C +ECL +G C Q C
Sbjct: 311 PVPKCDQRTEFECGGGMCIPLSKVCDKKPDCPNWEDEPGDKC-GKNECLENNGGCSQKCA 369
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+T Y C C GY L D K+C VN
Sbjct: 370 DTPGGYYCDCLHGYKLM-DNKTCEDVN 395
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+AGM G +R +V+ ++WP+ L +D + +YW D+ LN + + DG V+
Sbjct: 576 EPKIERAGMDGSHRPTIVSYEVKWPNGLTLDLVKKRVYWVDAKLNVISACNYDGKERQVI 635
Query: 165 CH-PNELR 171
+ P+ L+
Sbjct: 636 LYSPDSLQ 643
>gi|348511376|ref|XP_003443220.1| PREDICTED: low-density lipoprotein receptor-like [Oreochromis
niloticus]
Length = 921
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 118/416 (28%), Positives = 168/416 (40%), Gaps = 119/416 (28%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCG--MGKCI 218
+ C N+ +CG+ +C+ L CDG DC +G DE P A C P +FSC + +CI
Sbjct: 23 ITCGTNQFQCGN-GRCITLRWVCDGSDDCGDGTDELPGTCAVKTCKPTEFSCAGRLNQCI 81
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK---------------------- 256
P +W CDG DC E+G+DE N QC + +C +
Sbjct: 82 PSTWHCDGKADC-ENGADEVNCAAKQCTESEFRCKSGQCVSSSFVCDDDVDCEDGSDEES 140
Query: 257 ----------------KCIPHNWLCDEEMDCSTDDIVDNTDE----------DWDKFHQC 290
C+P W CD + DCS D +DE D H C
Sbjct: 141 CPPVTCSSASFQCNNTVCLPRLWACDGDSDCS-----DGSDEWPETCGTKTPDLVSIHHC 195
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-- 348
+ + +C S +CI +W CD + DC +D +DE + + V C P+E CG
Sbjct: 196 SSMEWRCG-SGECIHVSWKCDGQADC-----LDQSDE-----ANCSRVTCSPDEFECGDG 244
Query: 349 --------------------------------------SSNQCVALSKFCDGKPDCSNGE 370
S +C+++ K CD K DC +
Sbjct: 245 TCIHGSLQCNHQYDCRDMSDEIGCVNATHCEGPTRFKCRSGECISMEKVCDKKRDCRDWS 304
Query: 371 DEGPFC---NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT-QCVDADECLIDGSCD 426
DE P +N+ N CSH C G C CP G + T +C D DEC +C
Sbjct: 305 DE-PLRECDSNECLYNNGGCSHICKDLKIGYECLCPPGYSLVDTRRCEDIDECANPDTCS 363
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Q C N SY C C EGY + P K C A+ A + F++ ++R++ L+ S
Sbjct: 364 QICINQMGSYKCECEEGYQVDPATKHCKAIGT----IAYLFFTNHHEVRKMTLDKS 415
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 43 DW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL-NSWDLPA 98
DW + Y+ + GT ++ R ++L F Q + + Q N + W PA
Sbjct: 480 DWVHGNLYWTDSVRGTVSVVTADGSRRKTL-FHQDLSKPRAIVVDPQSNFVYWTDWGNPA 538
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++EKAG++G +R+ LVT NI WP+ + +D LYW DS L+T+ S+ V G
Sbjct: 539 --------KIEKAGLNGGDRTALVTDNIMWPNGITLDLLNQRLYWVDSKLHTLSSIDVQG 590
Query: 159 SHNAVL 164
L
Sbjct: 591 GGRRTL 596
>gi|292606975|gb|ADE34166.1| vitellogenin receptor [Nilaparvata lugens]
Length = 1931
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 142/322 (44%), Gaps = 40/322 (12%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
+C+ L++ CD K DCS+ DE FC P F CG G CI C+ DCL
Sbjct: 44 GECILLAQHCDEKDDCSDRSDEKNCELDFCRG---PQFFECGNGNCIDGDMVCNDVRDCL 100
Query: 232 EDGSDEPNTCIH-----------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
DGSDE H +C N K CIP W+CD E +C +D++
Sbjct: 101 -DGSDEDEQLCHTQHQEHHINYPECDNATQFTCDDKMCIPWAWVCDGEPNC-----LDDS 154
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDKYFSH 335
DE + H C + QC CI ++ CD DC D +DE+ Y
Sbjct: 155 DEKTSLCQKHHCSREEFQCR-DGHCIEEDFKCDGSPDCK-----DGSDEENCPVGVYSMD 208
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCS-HKCSP 393
+ C C+ +S C+ K DC +G DEG C+ K DC CS +C
Sbjct: 209 DECTLDNERFPCHDRTLCIDISALCNNKRDCFDGSDEGGLCHEKIDCNGKANCSIEQCFQ 268
Query: 394 TPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
+P G +C C G + CVD DEC G CDQ C+N + CSC GY L+ DG +C
Sbjct: 269 SPSGQICLCSKGYKHDNGVCVDIDECKEFGICDQKCSNLVGGFRCSCDPGYALQKDGHTC 328
Query: 454 TAVNVPQDEPASIIFSSTVDIR 475
A EP I FS +IR
Sbjct: 329 RAEG--GKEPL-IYFSLGREIR 347
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 165/382 (43%), Gaps = 94/382 (24%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPGQFSCGMGKCIPESWKCDG 226
E RC +SN+CV+ ++ CD +PDCS+G DE C+A QF C G CI +C+G
Sbjct: 1085 EFRCSTSNECVSEAQRCDLQPDCSDGSDE-LGCDAHLCDKTAQFRCRSGACIAAELECNG 1143
Query: 227 FVDCLEDGSDEPNTCIH--------------QCFNGQVQC-------------------- 252
+DC D SDE C H QC + +++C
Sbjct: 1144 EMDC-RDASDEHAKCNHVRTCSPNQITCNNGQCIDKELKCNGRNDCDDASDEQSCPQRPI 1202
Query: 253 ----------ALSKKC-------------IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
A S +C IP + C+ +CS D
Sbjct: 1203 AHIPVFANTGASSPECDTRFEFECERGHCIPSSARCNHTSECSNG-------RDELNCMG 1255
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----------WDKYFSHNAVL 339
C + Q QC +++CI H W+CD++ DC DN+DE+ D+ + +
Sbjct: 1256 CHHDQFQCK-NERCIYHTWVCDKKNDCG-----DNSDEEEALCKTRKGNADQSVATKSDT 1309
Query: 340 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
RC S +++C+ K C+ + DCS+G DEG C+ CE+ CS C TP G
Sbjct: 1310 RCFGSFRCASDASECIHTDKVCNNEKDCSDGSDEGGMCDKG--CESAGCSDTCQRTPHGP 1367
Query: 399 MCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE-GYTLRPDGKSCTA 455
C CP G + + CVD DEC + C Q C+NT ++ CSC Y LR +G SC A
Sbjct: 1368 KCTCPQGFELSGDAKTCVDIDECATEEYCSQYCSNTPGAFRCSCKAPEYVLRENGMSCKA 1427
Query: 456 VNVPQDEPASIIFSSTVDIRRI 477
+ I+S +IR +
Sbjct: 1428 ----KGGEMQFIYSVYNEIRTM 1445
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 103/238 (43%), Gaps = 49/238 (20%)
Query: 165 CHPNELRCGSSN------QCVALSKFCDGKPDCSNGEDE-------GPFCNAECTPGQFS 211
C E CG S+ C+A K CDG DC GEDE F C PGQF+
Sbjct: 976 CERGEFECGESSVAGIVRHCIAAKKKCDGNKDCPMGEDEDRSLCGLKDFSKLHCLPGQFA 1035
Query: 212 CGMG-KCIPESWKCDGFVDC---------------LEDGSDEPNTCIHQCFNGQVQCALS 255
C G +CIP++ C+ DC EDG +PN C + +C+ S
Sbjct: 1036 CLDGSRCIPDALLCNWHADCDDHSDETLGCDSSRAPEDGRAQPNI-PEVC---EFRCSTS 1091
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEM 314
+C+ CD + DCS D +DE H C Q +C S CI C+ EM
Sbjct: 1092 NECVSEAQRCDLQPDCS-----DGSDELGCDAHLCDKTAQFRCR-SGACIAAELECNGEM 1145
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC D +DE ++ C PN++ C ++ QC+ C+G+ DC + DE
Sbjct: 1146 DCR-----DASDEHAK---CNHVRTCSPNQITC-NNGQCIDKELKCNGRNDCDDASDE 1194
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ ++GM G + V++N+ WP+ + ID+ LYW D+ + T+ES+R+DG+
Sbjct: 475 IARSGMDGSDVFEFVSENLGWPNGITIDHGNQRLYWVDAKMTTIESIRLDGT 526
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 101 IFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
I+ DE + +A G R P+VT ++ P L +D+ +Y+ DS + + D SH
Sbjct: 381 IYEGDEMIVRAQQLGAERMPIVTAGLREPEDLAVDWVTGNIYFTDSGMKMIGVCCADASH 440
Query: 161 NAVL 164
AVL
Sbjct: 441 CAVL 444
>gi|297668563|ref|XP_002812504.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Pongo abelii]
Length = 722
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 162/363 (44%), Gaps = 60/363 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTP-GQFSCGMGKCIPESW 222
C ++ CG+ +C+ + CD + DC + DE C C P QF C G+CI W
Sbjct: 3 CQVDQFSCGN-GRCIPRAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKW 61
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDN 279
CD DC + + C+H CF+ Q +C+ S +CIP +W CD + DC S + ++
Sbjct: 62 HCDSDDDCGDGSDEV--GCVHSCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINC 118
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD-------------------- 319
T E+ C + QC CIP W CD E DC
Sbjct: 119 TKEEIRSPAGCNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKGCNGTVRLCDHKTKFS 178
Query: 320 ------------------DIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFC 360
D D +DED ++ LC P + C + ++ C+ K C
Sbjct: 179 CWSTGRCINKAWVCDGDIDCEDQSDED-----DCDSFLCGPPKYPCANDTSVCLQPEKLC 233
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDAD 417
+GK DC +G DEG C ++ N CS+ CS P RG +C CP G NK C D
Sbjct: 234 NGKKDCPDGSDEGDLC-DECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 292
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C C Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI
Sbjct: 293 YCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRI 349
Query: 478 HLN 480
L+
Sbjct: 350 DLH 352
>gi|410922593|ref|XP_003974767.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Takifugu rubripes]
Length = 1200
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 137/309 (44%), Gaps = 23/309 (7%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
++C+ + CDG+ DC +G DE + +C +F C G+C+ +CDG DC D S
Sbjct: 127 SRCIPETFLCDGENDCLDGSDEANCVDKDCGSMEFKCTSGQCVSSVMRCDGHHDCW-DHS 185
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
DE Q + C SK+C+ W+CD DC D D D + C Q
Sbjct: 186 DEEGCTTAQVCTTKHHCPQSKECLVQEWICDGHQDCK--DGSDEKDCPVTPLN-CGEFQW 242
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C +CI W CD DC D +DE ++ C ++ +CG S +C+
Sbjct: 243 SCISKTQCISTTWRCDSMEDCK-----DGSDET-----ECGSMHCLSHQFQCG-SQECLD 291
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQ 412
L+ C+G +C++G DEG C + E CS C TP+G C C AG +
Sbjct: 292 LALVCNGYINCADGSDEGGSCQTTCTEDEMNHCSQSCYSTPQGTRCHCSAGYRLIEDGRS 351
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N+ SY C C GY +G C P ++ S
Sbjct: 352 CSDIDECKSPGGCSQLCINSPGSYHCDCHPGYLKEANGHDCKIRGEPL-----LLTSIQT 406
Query: 473 DIRRIHLNG 481
D+ + L G
Sbjct: 407 DLFLVGLRG 415
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 36/210 (17%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDG 226
++ +C +C+ + CD P C + DE C + C +C+P ++ CDG
Sbjct: 9 DQFQCAHGKKCIDQDQVCDDIPQCQDRSDELD-CRKQTDTCHHQCDNKSRCLPSTFLCDG 67
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DCL DG+DE N Q QCA +KCI + +CD E C DN+DE +
Sbjct: 68 EWDCL-DGTDEANC-------EQFQCAHGRKCIERDLVCDGEPQCQ-----DNSDE--LE 112
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHP 342
H+ G +CIP +LCD E DC +D +DE D D C
Sbjct: 113 CHKMMEGCSHQCDESRCIPETFLCDGENDC-----LDGSDEANCVDKD---------CGS 158
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +S QCV+ CDG DC + DE
Sbjct: 159 MEFKC-TSGQCVSSVMRCDGHHDCWDHSDE 187
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
Q QCA KKCI + +CD+ C D +DE D Q QC +C+P +
Sbjct: 10 QFQCAHGKKCIDQDQVCDDIPQCQ-----DRSDE-LDCRKQTDTCHHQCDNKSRCLPSTF 63
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
LCD E DC +D TDE + + +C +C+ CDG+P C +
Sbjct: 64 LCDGEWDC-----LDGTDE------------ANCEQFQCAHGRKCIERDLVCDGEPQCQD 106
Query: 369 GEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAGQN-----PNKTQCVDAD 417
DE +C + CSH+C + F G+N ++ CVD D
Sbjct: 107 NSDE-------LECHKMMEGCSHQCDESRCIPETFLCDGENDCLDGSDEANCVDKD 155
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G R +V ++ WP + +D + +YW D L + S +DG+ +L
Sbjct: 540 KIERAGMDGSERRAVVNSSLGWPGGVAVDAIAERVYWADERLGAIGSAALDGNDIRIL 597
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+E A M G R L K+ P+SL +N + +YW D+ L + +V++DGS
Sbjct: 858 VECANMDGTGRRVLW-KDCVGPTSLSFSHNGETIYWADTELGNIGAVQLDGSGY------ 910
Query: 168 NELRCGSSNQCVALS 182
EL+ G VAL+
Sbjct: 911 RELKVGDGVAAVALT 925
>gi|195457050|ref|XP_002075403.1| GK17732 [Drosophila willistoni]
gi|194171488|gb|EDW86389.1| GK17732 [Drosophila willistoni]
Length = 2014
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 159/365 (43%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG+ DC + DE CT F+C G CI +++CDG DC +D SDE
Sbjct: 291 CIPRPWLCDGENDCKDFSDEAHCNRTSCTEEHFACNDGYCISLAFRCDGERDC-DDNSDE 349
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 350 YKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 404
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K QC + + +C CIP W CD+E DC + + D S +++ C P+E
Sbjct: 405 KPSQCTSNEYKCT-DGTCIPKRWKCDKEQDCDGGE----DENDCGNMSSEHSLTCGPDEF 459
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C + +C+ + CDG PDCS+ EDE G F C K + NLK
Sbjct: 460 TC-HNGRCILRTWLCDGYPDCSSAEDEVDCHLQCDAGQFLCPAKKNITNLKICVHQKHVC 518
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C T RG C C G N NK C D D
Sbjct: 519 DGQNDCPLGEDEVNCPEEQICPDHKQCEQLCIKTARGRDECACRLGYLMNENKVNCTDID 578
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+VCSC GY LRPD ++C A+ +++ ++ DIR
Sbjct: 579 ECQYLTSPVCSQKCHNTQGSFVCSCESGYILRPDLRTCKALG----GAMTLLVANRWDIR 634
Query: 476 RIHLN 480
R+ L+
Sbjct: 635 RVTLS 639
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G NR + +K + WP+ L IDY++ LY+ D T+E++ DG+ +
Sbjct: 1076 IERANMDGHNRVIISSKKLIWPNGLAIDYDKSKLYFVDGGTKTLENMNFDGTGRKIIINN 1135
Query: 164 LCHPNEL 170
L HP L
Sbjct: 1136 LGHPFGL 1142
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E+A M G R +++K + WP+ L IDY +YW D+ + +E +DGS
Sbjct: 761 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNHKIYWADAKQHAIECSNLDGS 813
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G +RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1378 RKIERSHLDGNDRSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1437
Query: 164 --LCHPNEL 170
L HP L
Sbjct: 1438 SSLHHPYAL 1446
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 25/169 (14%)
Query: 48 FKRILNGTH-TLALEFNHRNQSLCF---IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+ I+ G H +AL+F H+ + L F + + V + ++ D++ W L +P
Sbjct: 643 YTAIVKGLHNAIALDF-HQRKGLLFWSDVSTDVIKMVYMNGTRVRDVI-KWGLESPGGIA 700
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN- 149
+D R+E + G R+ + + ++ P ++VI + + +W D N
Sbjct: 701 VDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVIHPGEALAFWSDWGPNP 760
Query: 150 TVESVRVDGSHNAVLCH-----PNELRCGSSNQCVALSKFCDGKPDCSN 193
+E +DGS V+ PN L N + + +CSN
Sbjct: 761 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNHKIYWADAKQHAIECSN 809
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1336 IEVANLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNDRSRIVT 1395
Query: 167 PN 168
N
Sbjct: 1396 AN 1397
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
WD P+ ++E++ + G NR+ +VT + +P+ L ID+ L W D+ + +
Sbjct: 1680 WDSPS--------KIERSYLDGSNRTAIVTSGVGFPTGLTIDFTNRRLLWADALDDNIGQ 1731
Query: 154 VRVDGSHNAVLC----HPNEL 170
V +G + HP L
Sbjct: 1732 VDFNGKRRQTIVPYAPHPFGL 1752
>gi|194213150|ref|XP_001490793.2| PREDICTED: low-density lipoprotein receptor-like [Equus caballus]
Length = 831
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 151/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 90 CAQDEFRC-LDGKCIAREFVCDADRDCLDGSDEASCPAPTCGPASFQCNSSACIPELWAC 148
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG DC +DGSDE P C + C + C+ S +C+ +W CD + DC
Sbjct: 149 DGDPDC-KDGSDEWPQRCGARDAAPPRDDSPCSALEFHCS-SGECVHSSWRCDGDPDCR- 205
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DED C + QC+ CI + CD+E DC D +DE
Sbjct: 206 ----DKSDEDNCAVATCQPDEFQCS-DGTCIHGSRQCDKEYDCK-----DMSDE----LG 251
Query: 334 SHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N LC P++ +C S +C+ L K C+ DC + DE +C N CSH
Sbjct: 252 CVNVTLCEGPSKFKC-RSGECIPLDKVCNSARDCEDWSDEPLRQCGTNECLDNNGGCSHI 310
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
CS G C CP G + ++ +C D DEC +C Q C N SY C C G+ L P
Sbjct: 311 CSDLKIGHECLCPEGFRLVDQRRCEDIDECQDPDACSQLCVNLEGSYKCECEAGFQLDPL 370
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A A + F++ ++R++ L+ S
Sbjct: 371 TKACKATGT----IAYLFFTNRHEVRKMTLDRS 399
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C E +C +C++ CDG+ +CS+ DE P + C G FSCG + +CIP+
Sbjct: 8 CGRREFQC-RDGKCISYKWVCDGRAECSDSSDEAPETCMSVTCMAGDFSCGGRVNRCIPQ 66
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE C + +C L KCI ++CD + DC +D +
Sbjct: 67 FWRCDGQVDC-ENGSDEQGCPPKTCAQDEFRC-LDGKCIAREFVCDADRDC-----LDGS 119
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
DE C QC S CIP W CD + DC D +DE + + +A
Sbjct: 120 DEASCPAPTCGPASFQCN-SSACIPELWACDGDPDCK-----DGSDEWPQRCGARDAAPP 173
Query: 339 ----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E C SS +CV S CDG PDC + DE
Sbjct: 174 RDDSPCSALEFHC-SSGECVHSSWRCDGDPDCRDKSDE 210
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQC-ALSKKCI 259
EC +F C GKCI W CDG +C + + P TC+ C G C +CI
Sbjct: 5 QGECGRREFQCRDGKCISYKWVCDGRAECSDSSDEAPETCMSVTCMAGDFSCGGRVNRCI 64
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD ++DC + +DE C + +C L KCI ++CD + DC
Sbjct: 65 PQFWRCDGQVDCE-----NGSDEQGCPPKTCAQDEFRC-LDGKCIAREFVCDADRDC--- 115
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S A C P +C SS C+ CDG PDC +G DE P
Sbjct: 116 --LDGSDE-----ASCPAPTCGPASFQCNSS-ACIPELWACDGDPDCKDGSDEWP 162
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + W
Sbjct: 459 DGLAVDWIHGNIYWTDSVLGTVSVADTKGLKRKTLFKEKDSKPRAIVVDPVHGFMYWTDW 518
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+
Sbjct: 519 GTPA--------KIKKGGLNGVDIYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSI 570
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G L HP L
Sbjct: 571 DVNGGDRKTILEDKKKLAHPFSL 593
>gi|194908368|ref|XP_001981758.1| GG12223 [Drosophila erecta]
gi|190656396|gb|EDV53628.1| GG12223 [Drosophila erecta]
Length = 1035
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 158/374 (42%), Gaps = 69/374 (18%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 220 RARTCSPDEYACKSGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQ 278
Query: 220 ESWK----------------------------------------CDGFVDCLEDGSDEPN 239
+ WK CDG DC DGSDE +
Sbjct: 279 KRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTSGACIAKRWVCDGDPDC-SDGSDERS 337
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + + QC C+ H+WLCD + DC D DE K C
Sbjct: 338 CANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRA 392
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSN 351
Q QC + CIP + C+ + DC+ D D D N C+ +E CG
Sbjct: 393 DQFQCG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGVNQGGCNATSEFDCGG-G 448
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QC+ +SK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 449 QCIPISKVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDLKVGHHCQCHKGYTLS 508
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
P+K C D +EC + G C Q C N + C C GY P + C A + AS+
Sbjct: 509 PDKRNCQDINECDVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASL 564
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 565 LLARRHDIRKIALD 578
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 112/269 (41%), Gaps = 64/269 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF C G CIP
Sbjct: 140 CDEKQFQCHSGD-CIPIRFVCDGDADCKDDSDEQIKECKFIEATCSSDQFRCRNGNCIPN 198
Query: 221 SWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIV 277
W+CD DC DGSDE N C + C + +C+P W+CD+ DCS
Sbjct: 199 KWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCS----- 252
Query: 278 DNTDE-------DWDKFHQCFNG--------------------QVQCAL----------- 299
D +DE D+F C NG + +C +
Sbjct: 253 DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTC 311
Query: 300 -SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S CI W+CD + DCS D +DE + C +E +C C+ S
Sbjct: 312 TSGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSW 366
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC 387
CDG DC +G+DE + A+C+N+ C
Sbjct: 367 LCDGDRDCPDGDDE-----HTANCKNVTC 390
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 89/221 (40%), Gaps = 64/221 (28%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC +D ++ C C + Q +C
Sbjct: 133 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDDSDEQIKECKFIEATCSSDQFRCR- 191
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCD 311
+ CIP+ W CD+E DC+ D +DE + + C + C + +C+P W+CD
Sbjct: 192 NGNCIPNKWRCDQESDCA-----DGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCD 246
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCG---------------------- 348
+ DCS D +DE HN C +E CG
Sbjct: 247 QSKDCS-----DGSDE-------HNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSD 294
Query: 349 -----------------SSNQCVALSKFCDGKPDCSNGEDE 372
+S C+A CDG PDCS+G DE
Sbjct: 295 EKECPVVPCDSVAEHTCTSGACIAKRWVCDGDPDCSDGSDE 335
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 701 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 760
Query: 167 PNEL 170
E
Sbjct: 761 SGEY 764
>gi|195432394|ref|XP_002064208.1| GK20043 [Drosophila willistoni]
gi|194160293|gb|EDW75194.1| GK20043 [Drosophila willistoni]
Length = 1905
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 162/368 (44%), Gaps = 64/368 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFSCGMGKCIPESWK 223
CH ++ C + +CV + CD DC + DE A+C G F C G CI SW+
Sbjct: 1037 CHEHQFAC-DNGKCVDSNLVCDNVNDCGDNSDENKCKTPAKCASGMFQCNGGSCIAASWE 1095
Query: 224 CDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
CDG +DC DGSDE + C H QC + +C L + C+ +CD +E++C
Sbjct: 1096 CDGRIDC-TDGSDEHDKCAHRQCPDNMHRCQLGQ-CLDRKLVCDSHNDCGDHSDELNCGA 1153
Query: 274 DDIVDNTDEDWDKFHQCF-------------NG--------------------QVQCALS 300
+ D +QC NG + QC
Sbjct: 1154 HGLGAVNISCPDHLYQCASNLKLCFDQAVRCNGTAECPRGEDEANCGDVCSIYEFQCRSG 1213
Query: 301 KKCIPHNWLCDEEMDC--STDDIV------DNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+CI + CD E DC +D+++ + ++ + +S C P+ C +
Sbjct: 1214 NQCIRKEFHCDGERDCDDGSDEVLCDNQKGQHKNQSAIESWSTARRTCRPHLFDCQDGD- 1272
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNN--KADCENLK-CSHKCSPTPRGAMCFCPAGQNPN 409
C+ +S+ C+ DC NG DEGP C +A+ K C HKC TP GA+C C G +
Sbjct: 1273 CLDMSRVCNNFNDCLNGNDEGPQCATACRANAGGRKVCQHKCRATPAGAVCSCFDGYRLD 1332
Query: 410 KTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
Q CVD DEC C Q C NT Y C C + LR D SC ++ Q +S++
Sbjct: 1333 IDQRSCVDIDECAEQQPCAQLCENTRGGYQCQCHADFMLRQDRVSCKSI---QGGGSSLL 1389
Query: 468 FSSTVDIR 475
FSS ++R
Sbjct: 1390 FSSYNEVR 1397
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGM--GKCIP 219
+ C+ ++ +CG + C+ +K CDG+ DC + DE C P F C G C+
Sbjct: 19 MRCNADQFQCGDGS-CILQAKMCDGRRDCPDNTDELECDYKMCRQPHWFPCAQTHGACLA 77
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-------KCIPHNWLCDEEMDC- 271
KC+G +C G DE N + ++ C+L + CIP +++CD + DC
Sbjct: 78 AELKCNGVENC-PGGEDELNCPGRFGSSRRLNCSLFEYMCQDDHSCIPLDFMCDGKPDCP 136
Query: 272 -STDDIV--DNTDEDWDKFHQCFNGQVQCALSKKCIPH-NWLCDEEMDCSTDDIVDNTDE 327
S+D++ + H C NG KC+ +W+CD DD D +DE
Sbjct: 137 DSSDELAGCKQSAASCTTGHVCANG--------KCLKQKSWVCD-----GVDDCGDGSDE 183
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
N + C + C+ LS+ CDG PDCS+ DE C++K DC + +C
Sbjct: 184 QG----CGNLCQTEHGKFLCRNRLNCLPLSQVCDGHPDCSDNSDESESCHSKPDCSSKQC 239
Query: 388 --SHKCSPTP-RGAMCFCPAGQNPN--KTQCVDADECLI--DGSCDQTCTNTHLSYVCSC 440
KC P G C+CP G + ++C D DEC DG C Q+C NT Y C C
Sbjct: 240 PPGAKCHMMPASGPECYCPQGFRLSNFASKCEDIDECQGPNDGLCSQSCENTSGGYKCLC 299
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+GY L D ++C V +EP +++++ + +H+ G
Sbjct: 300 DDGYELASDNRTC---RVSSEEPL-LLYTTQNTVMGMHIKG 336
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/217 (34%), Positives = 101/217 (46%), Gaps = 32/217 (14%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGED-------EGPFCNAECTPGQFSCGMG-KCIPE 220
E RC S +C+ + C+ + DC + D E P +A CT QF+C G +C+P+
Sbjct: 951 EFRC-RSGECLTQAHRCNSRQDCVDHSDEENCDAAEKPTKSAMCTANQFTCHNGEQCLPK 1009
Query: 221 SWKCDGFVDCLEDGSDEPNTCI----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+CDG DCL DGSDE + + C Q C + KC+ N +CD DC
Sbjct: 1010 KQRCDGNSDCL-DGSDEQHCALFDKTKDCHEHQFACD-NGKCVDSNLVCDNVNDCG---- 1063
Query: 277 VDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DN+DE+ K +C +G QC CI +W CD +DC+ D +DE DK
Sbjct: 1064 -DNSDENKCKTPAKCASGMFQCN-GGSCIAASWECDGRIDCT-----DGSDEH-DKCAHR 1115
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C N RC QC+ CD DC + DE
Sbjct: 1116 Q---CPDNMHRC-QLGQCLDRKLVCDSHNDCGDHSDE 1148
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGM 214
GS + C E C + C+ L CDGKPDC + DE C A CT G C
Sbjct: 102 GSSRRLNCSLFEYMCQDDHSCIPLDFMCDGKPDCPDSSDELAGCKQSAASCTTGHV-CAN 160
Query: 215 GKCIPE-SWKCDGFVDCLEDGSDEP---NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
GKC+ + SW CDG DC DGSDE N C Q +G+ C C+P + +CD D
Sbjct: 161 GKCLKQKSWVCDGVDDC-GDGSDEQGCGNLC--QTEHGKFLCRNRLNCLPLSQVCDGHPD 217
Query: 271 CSTDDIVDNTDE 282
CS DN+DE
Sbjct: 218 CS-----DNSDE 224
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-------TCIHQCFNGQVQCALSKKCIPH 261
+F C G+C+ ++ +C+ DC+ D SDE N T C Q C ++C+P
Sbjct: 951 EFRCRSGECLTQAHRCNSRQDCV-DHSDEENCDAAEKPTKSAMCTANQFTCHNGEQCLPK 1009
Query: 262 NWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC +D +DE +DK C Q C + KC+ N +CD DC
Sbjct: 1010 KQRCDGNSDC-----LDGSDEQHCALFDKTKDCHEHQFACD-NGKCVDSNLVCDNVNDCG 1063
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DN+DE+ K C +C + C+A S CDG+ DC++G DE C
Sbjct: 1064 -----DNSDENKCK----TPAKCASGMFQC-NGGSCIAASWECDGRIDCTDGSDEHDKCA 1113
Query: 378 NKADCENLKCSHKC 391
++ +N+ H+C
Sbjct: 1114 HRQCPDNM---HRC 1124
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G + PLVT+NI WP+ + +D +Q +YW D+ L V++VR DG+ +
Sbjct: 462 IARASMDGTHSMPLVTENIHWPNGIALDMHQQRIYWVDAKLGNVQTVRPDGTGRRTVLDG 521
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 522 MLKHPYGL 529
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 64/160 (40%), Gaps = 34/160 (21%)
Query: 139 DILYWCDSHLNTV--ESVRVDGSHN----------AVLCHPNELRCGSSNQCVALSKFCD 186
D LY C S+L ++VR +G+ +C E +C S NQC+ CD
Sbjct: 1165 DHLYQCASNLKLCFDQAVRCNGTAECPRGEDEANCGDVCSIYEFQCRSGNQCIRKEFHCD 1224
Query: 187 GKPDCSNGEDE-------GPFCNAE-----------CTPGQFSCGMGKCIPESWKCDGFV 228
G+ DC +G DE G N C P F C G C+ S C+ F
Sbjct: 1225 GERDCDDGSDEVLCDNQKGQHKNQSAIESWSTARRTCRPHLFDCQDGDCLDMSRVCNNFN 1284
Query: 229 DCLEDGSDEPNTCIHQC---FNGQVQCALSKKCIPHNWLC 265
DCL +G+DE C C G+ C + P +C
Sbjct: 1285 DCL-NGNDEGPQCATACRANAGGRKVCQHKCRATPAGAVC 1323
>gi|126074|sp|P20063.1|LDLR_RABIT RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor
gi|165456|gb|AAA31383.1| low density lipoprotein receptor precursor, partial [Oryctolagus
cuniculus]
Length = 837
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 151/333 (45%), Gaps = 39/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + C++ CDG+PDC +G DE + C P F C C+P W C
Sbjct: 96 CSQDEFRC-AEGACISRLFACDGEPDCPDGSDEASCAPSTCGPAHFRCNSSSCVPALWAC 154
Query: 225 DGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
DG DC +DGSDE P C + C S +C+ +W CD + DC
Sbjct: 155 DGEPDC-DDGSDEWPARCGARPSPQPGRGPCSRHEFHCG-SGECVHASWRCDGDADCR-- 210
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE C + QC+ CI + CD++ DC D +DE
Sbjct: 211 ---DGSDERDCAAATCRPDEFQCS-DGTCIHGSRQCDQQQDCG-----DMSDE----VGC 257
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCSHK 390
N LC P++ +C S +C++L K C+ DC + DE P N+ N CSH
Sbjct: 258 VNVTLCEGPDKFKC-HSGECISLDKVCNSARDCQDWSDE-PIKECATNECMRGNGGCSHT 315
Query: 391 CSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G C CP G ++ +C D +EC C Q C N SY C C G+ L P
Sbjct: 316 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 375
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
++C AV D A + F++ ++R++ L+ S
Sbjct: 376 SQACKAV----DSIAYLFFTNRHEVRKMTLDRS 404
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C + +C++ CDG +C +G DE + C FSCG + +CIP
Sbjct: 14 CGRNEFQC-RNGKCISYKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIPG 72
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCDG DC EDGSDE C + +CA CI + CD E DC D +
Sbjct: 73 HWKCDGQQDC-EDGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP-----DGS 125
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
DE C +C S C+P W CD E DC D+ ++W
Sbjct: 126 DEASCAPSTCGPAHFRCN-SSSCVPALWACDGEPDC------DDGSDEWPARCGARPSPQ 178
Query: 339 ----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E CG S +CV S CDG DC +G DE
Sbjct: 179 PGRGPCSRHEFHCG-SGECVHASWRCDGDADCRDGSDE 215
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALS-KKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 13 KCGRNEFQCRNGKCISYKWVCDGSSEC-QDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIP 71
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD + DC D +DE C + +CA CI + CD E DC
Sbjct: 72 GHWKCDGQQDCE-----DGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP--- 122
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D +DE S C P RC SS+ CV CDG+PDC +G DE P
Sbjct: 123 --DGSDE-----ASCAPSTCGPAHFRCNSSS-CVPALWACDGEPDCDDGSDEWP------ 168
Query: 381 DCENLKCSHKCSPTPRGAMC-----FCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
+C + SP P C C +G+ + + D D DGS ++ C
Sbjct: 169 ----ARCGARPSPQPGRGPCSRHEFHCGSGECVHASWRCDGDADCRDGSDERDCA 219
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A R ++L + ++ + A W +PA
Sbjct: 476 YWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMYWTDWGVPA-------- 527
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++EK G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 528 KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLE 587
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 588 DEQRLAHPFSL 598
>gi|89268696|emb|CAJ82714.1| very low density lipoprotein receptor [Xenopus (Silurana)
tropicalis]
Length = 395
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/321 (33%), Positives = 154/321 (47%), Gaps = 36/321 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
LC ++ +C + + +L K CDG+ DC N EDE N C+P +F+C G+CI ++
Sbjct: 102 TLCEGSQFQCANGHCITSLWK-CDGESDCPNAEDEENCGNITCSPAEFTCSSGRCISSTF 160
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G DC DGSDE N C + QC S CIP NW+CD+EM+C +
Sbjct: 161 VCNGQNDC-SDGSDEENCVPPTCGAHEFQCKNS-SCIPLNWVCDDEMNCPS--------- 209
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C Q +C CI + CD DC +D TDE K + + P
Sbjct: 210 -----RTCQPDQFKCE-DGNCIHGSRQCDGVRDC-----LDGTDEIRCKNVNQCS---GP 255
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPTPRGAM 399
+ +C S +C+ ++K C+ + DC + DE P N+ + N CSH C G
Sbjct: 256 GKFKC-RSGECIDIAKVCNKQKDCKDWSDE-PIKECYVNECEVNNGGCSHLCHNLVIGYE 313
Query: 400 CFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C C AG + ++ C D DEC C Q C N Y C C++GY + P C AV
Sbjct: 314 CDCTAGFKLIDRKTCGDIDECQNPEICSQICVNLKGGYKCECSKGYQMDPSTGVCKAVG- 372
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
EP +IF++ DIR++ L
Sbjct: 373 --REPC-LIFTNRRDIRKVGL 390
>gi|327264143|ref|XP_003216875.1| PREDICTED: low-density lipoprotein receptor 1-like [Anolis
carolinensis]
Length = 863
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 153/328 (46%), Gaps = 34/328 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE +C + N C+ L CD DC +G DE C P F C +CIP+ W C
Sbjct: 109 CADNEFQCKNGN-CITLDFVCDEDRDCEDGSDEEHCSPPTCNPEMFHCNSSECIPKLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQCFNG----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
D DC +DGSDE P C Q N + C S +CI +W CD DC D
Sbjct: 168 DNDADC-KDGSDESPVLCGKQVTNPCSPLEFHCG-SGECIHQSWKCDGSFDCK-----DR 220
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C CI + C++E DC D +DE N
Sbjct: 221 SDEANCAKVTCRPDQFECN-DGTCIHGSLQCNKENDCK-----DMSDE----VGCINVTT 270
Query: 340 CH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NNKADCENLKCSHKCSPTP 395
C PN +CGS +C+ + K C+G DC + DE P N+ + CSH C+
Sbjct: 271 CKGPNIFKCGSG-ECITMDKVCNGLKDCRDWSDE-PLKECRTNECLAKKGGCSHICNDLK 328
Query: 396 RGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G C CP G + ++ +C D +ECL +C Q+C N SY C C EGY + P K+C
Sbjct: 329 IGYECLCPEGFHLIDQRKCEDINECLNPDTCSQSCVNLEGSYKCECKEGYQIDPVTKTCK 388
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A+ A + F++ ++R++ L+ S
Sbjct: 389 AIGT----IAYLFFTNRHEVRKMTLDRS 412
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/348 (31%), Positives = 150/348 (43%), Gaps = 65/348 (18%)
Query: 159 SHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG-- 213
S NAV LC NE +CG+ + C+ CDGK +C +G DE + C PGQFSCG
Sbjct: 20 SGNAVSLCGRNEFQCGNRD-CIPYKWICDGKAECQDGSDESLDTCKSVTCDPGQFSCGGR 78
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+ +CI SW+CD DC E+GSDE N C + + QC + CI +++CDE+ DC
Sbjct: 79 VNRCINMSWRCDSQTDC-ENGSDEENCPPKTCADNEFQCK-NGNCITLDFVCDEDRDCE- 135
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C C S +CIP W CD + DC D +DE
Sbjct: 136 ----DGSDEEHCSPPTCNPEMFHCN-SSECIPKLWACDNDADCK-----DGSDESPVLCG 185
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------------------- 373
C P E CGS +C+ S CDG DC + DE
Sbjct: 186 KQVTNPCSPLEFHCGSG-ECIHQSWKCDGSFDCKDRSDEANCAKVTCRPDQFECNDGTCI 244
Query: 374 ---PFCNNKADCENLKCSHKC--SPTPRGAMCF-CPAGQNPNKTQ-------CVD----- 415
CN + DC+++ C T +G F C +G+ + C D
Sbjct: 245 HGSLQCNKENDCKDMSDEVGCINVTTCKGPNIFKCGSGECITMDKVCNGLKDCRDWSDEP 304
Query: 416 -----ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ECL G C C + + Y C C EG+ L D + C +N
Sbjct: 305 LKECRTNECLAKKGGCSHICNDLKIGYECLCPEGFHLI-DQRKCEDIN 351
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++ K+G++G + PLVT+ IQWP+ + +D LYW DS ++V S+ VDG +
Sbjct: 533 ISAKIAKSGLNGVDNFPLVTEGIQWPNGITLDLVNQRLYWVDSKYHSVFSIGVDGENRKT 592
Query: 164 L 164
+
Sbjct: 593 I 593
>gi|348521570|ref|XP_003448299.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Oreochromis niloticus]
Length = 4622
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 108/320 (33%), Positives = 151/320 (47%), Gaps = 33/320 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 1070 ANGRCININWRCDNDNDCGDSSDEAG-CSHSCSSVQFKCNSGRCIPEYWTCDGDNDCGDY 1128
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+ C +Q C + QC + CIP W CD + DC D+ D ++ +
Sbjct: 1129 SDETHANCTNQATRPPGGCHVDEFQCRMDGLCIPMRWRCDGDTDCM--DLSDESNCE-GV 1185
Query: 287 FHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H C + C S +CI W+CD + DC DN+DED + A++C +
Sbjct: 1186 THTCDPAVKFSCRDSARCISKAWVCDGDSDCE-----DNSDED-----NCEALVCKLSHH 1235
Query: 346 RCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCP 403
C +++ C+ K CDG DC +G DE C+ N CSH CS P G MC CP
Sbjct: 1236 VCATNDSICLPPEKLCDGTDDCPDGSDE-KLCD-LCSVGNGGCSHNCSIIPGEGFMCSCP 1293
Query: 404 AGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
G NKT C C C Q C S CSC EG+ L D +SC + + +
Sbjct: 1294 LGMELGADNKT-CQIQSFCAKHLKCSQKCEQEKSSVKCSCYEGWELESDMESCKSTDPFK 1352
Query: 461 DEPASIIFSSTVDIRRIHLN 480
IIFS+ +IRRI L+
Sbjct: 1353 ---PFIIFSNRHEIRRIDLH 1369
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 105/197 (53%), Gaps = 10/197 (5%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCG 348
C + Q C CI W CD E DC D +DE D +HN V C N+ C
Sbjct: 118 CSSKQFVCKDQVTCISKGWRCDGEKDCP-----DGSDESPD-ICTHNKVNQCPVNKYPCL 171
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAGQN 407
C+ SKFC+G PDC++G DEGP C KA DC + C C+ T G C+C G
Sbjct: 172 DVEVCLHASKFCNGVPDCTDGWDEGPHCRAKAPDCASHGCEVGCAVTHDGPRCYCGDGYE 231
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
+ +C D +EC + G+C QTCTNT SY CSC EGY L+PD +SC A N P D
Sbjct: 232 VAADGKKCKDFNECGVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRLPV 291
Query: 466 IIFSSTVDIRRIHLNGS 482
++ ++ +IR L+GS
Sbjct: 292 LLIANLNNIRCTSLSGS 308
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 164/350 (46%), Gaps = 49/350 (14%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-G 213
D +H C + CG+ ++C++ CDG DC +G DE C ++ C+P F C G
Sbjct: 2806 ADETHCDKFCTSTQFECGN-HRCISSHWVCDGSDDCGDGSDEDQKCKSKTCSPEAFQCPG 2864
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEP---------NTCIHQCFNGQVQCALSKKCIPHNWL 264
C+P+ WKCDG DC DG+DE NTC + + C +++CIP +++
Sbjct: 2865 SHMCVPQRWKCDGDNDC-PDGADESVKAGCMYTNNTCDPE---NEFMCQ-NRQCIPKHFV 2919
Query: 265 CDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD + DC VD +DE + ++ C + +CA + W CD E DC D
Sbjct: 2920 CDHDFDC-----VDKSDESLECEYPPCGPDEFRCANGRCLNQKKWECDGEFDCQ-----D 2969
Query: 324 NTDE--------DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GP 374
+DE D ++ + +A +CH + +C+ + CD DC +G DE
Sbjct: 2970 RSDEAPKNPRCTDSERTCNESAFMCH--------NKKCLNETLLCDRNDDCGDGSDELNC 3021
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNT 432
F N + + C+ C G C C G + CVD DEC C Q C NT
Sbjct: 3022 FINECLNSKLSGCTQLCDDLKIGFKCRCHPGFQLKRDGKTCVDIDECTTTYPCSQRCINT 3081
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
H S+ C C +G+ L P+ T DE +IF++ +R+++L+G+
Sbjct: 3082 HGSFHCLCVDGFELSPNDP--TVCKSTSDEEPYLIFANRYYLRKLNLDGT 3129
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 116/236 (49%), Gaps = 25/236 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C +C +N+C+ L CDG DC N EDE C+A C P Q+ C G+CIP SW
Sbjct: 980 CSAERFKC-QNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYPCASGRCIPISW 1038
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CD DC D SDEP++C + CF Q CA + +CI NW CD + DC D++
Sbjct: 1039 TCDLDDDC-GDRSDEPDSCAYPTCFPLTQFTCA-NGRCININWRCDNDNDCG-----DSS 1091
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE H C + Q +C S +CIP W CD + DC D D T + + C
Sbjct: 1092 DEA-GCSHSCSSVQFKCN-SGRCIPEYWTCDGDNDCG--DYSDETHANCTNQATRPPGGC 1147
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR 396
H +E +C C+ + CDG DC + DE ++CE + +H C P +
Sbjct: 1148 HVDEFQCRMDGLCIPMRWRCDGDTDCMDLSDE-------SNCEGV--THTCDPAVK 1194
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 113/228 (49%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C GEDE C P QF C + K CIP W
Sbjct: 3494 VCLPSQFKCSHPSRCIPGIFRCNGQVNCGEGEDEKDCPEVTCAPTQFQCAITKRCIPRVW 3553
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3554 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 3610
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ + C Q +C + +C+P W CD + DC DN+DED + C
Sbjct: 3611 EECAE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----NCMPRQCS 3658
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C+ K D + C +
Sbjct: 3659 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDEHG-CDLKCDHDQFSCKN 3704
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 157/442 (35%), Gaps = 137/442 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P LD R
Sbjct: 3183 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRAVALDVRYGYL 3241
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ + GM G NRS ++ I WP+ L +D+
Sbjct: 3242 YWSDWGDNPHIGRIGMDGTNRSVIIEDKITWPNGLTLDFINDRIYWADAREDYIEFASLD 3301
Query: 137 --------NQDI------------LYWCD----------SHLNTVESVRVDGSHNA---- 162
+QDI +YW D L T ++ + H
Sbjct: 3302 GKNRHTVLSQDIPHIFAMTLFEEYIYWTDWETKSINRAHKSLGTNKTTLISTLHRPMDIH 3361
Query: 163 ---------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
VL HP ++ G + LS K C ++ C + CT QF
Sbjct: 3362 IYHPYRQPPVLNHPCQINNGGCSNLCLLSPGGGYKCACPTNFYLANDQRTCMSNCTASQF 3421
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTC----------------------------- 241
C KCIP WKCD DC D SDEP C
Sbjct: 3422 VCKNDKCIPFWWKCDTEDDC-GDRSDEPENCPEFNCRPGQFQCGTGICTNPAYICDGDND 3480
Query: 242 -----------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
IH C Q +C+ +CIP + C+ +++C + DE C
Sbjct: 3481 CQDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQVNCG-----EGEDEKDCPEVTC 3535
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 3536 APTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDS 3586
Query: 351 NQCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 3587 GRCIPARWKCDGEDDCGDASDE 3608
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 142/349 (40%), Gaps = 75/349 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +F+C G+CI WKC
Sbjct: 3618 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDNCMPRQCSESEFACTNGRCIAGRWKC 3676
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + C +C + Q C + CIP W CD + DC +D +DE+
Sbjct: 3677 DGDHDC-ADGSDE-HGCDLKCDHDQFSCK-NGHCIPIRWRCDADPDC-----MDGSDEEN 3728
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + C P W CD E DC DN+DE+ ++ C P
Sbjct: 3729 CGTGRHCPLDEYQCN-NTLCKPLAWKCDGEDDCG-----DNSDENPEEC---RKFQCPPT 3779
Query: 344 E-LRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFC--------NNKADCENLK 386
RC + C+ +S+ CDG +C + DE P C N + NL+
Sbjct: 3780 RAFRCQNDRVCLQVSRRCDGVNNCGDNSDELNCQTPPSVPTCEKDEFLCANGRCISSNLR 3839
Query: 387 CSH------------------------------------KCSPTPRGAMCFC-PAGQNPN 409
C+ C + C C P Q
Sbjct: 3840 CNFFNDCEDYGSDEINCKTDTKLNDCRSNTTQCGDGDEAHCVTNGTDSFCSCKPGFQKIG 3899
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C D +ECL G C C NT SY CSC + +T D +C A N+
Sbjct: 3900 HHTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRIND--TCKADNM 3946
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHN 262
+C PG+F+C +CI E WKCDG DCL++ + P C H C + +C + +CIP
Sbjct: 938 QCQPGEFACKNNRCIQERWKCDGDNDCLDNSDEAPELCYQHTCSAERFKCQ-NNRCIPLR 996
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD + DC D+ NT C Q CA S +CIP +W CD + DC
Sbjct: 997 WLCDGDNDCGNDEDESNTTC---SARTCPPNQYPCA-SGRCIPISWTCDLDDDCG----- 1047
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE + C P ++ +C+ ++ CD DC + DE C++
Sbjct: 1048 DRSDEPDSCAYP----TCFPLTQFTCANGRCININWRCDNDNDCGDSSDEAG-CSHSCSS 1102
Query: 383 ENLKC-SHKCSP 393
KC S +C P
Sbjct: 1103 VQFKCNSGRCIP 1114
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 130/304 (42%), Gaps = 57/304 (18%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
+++KA M G + +T K + WP+ L +D Q ILYW D++ + +E V ++ + V
Sbjct: 768 KIKKAWMDGSHHQVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIEMVYLNTTERKVVY 827
Query: 164 ----------LCHP------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207
LCH NE R GS + ++K + E +A
Sbjct: 828 EGQELNHAFGLCHYKQFLFWNEYRGGSIYKLDQVTKTVTLLRNERPPIFEIRVYDAHQQQ 887
Query: 208 GQFSCGM--GKC------IPESWKC---------DGFVDCLEDGSDEPNTCIHQCFNGQV 250
G +C + G C IP C D V C + S P QC G+
Sbjct: 888 GTNACRVNNGGCSILCLAIPNGRSCACADDQILDDDNVTCTANPSYVPPP---QCQPGEF 944
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNW 308
C + +CI W CD + DC +DN+DE + H C + +C + +CIP W
Sbjct: 945 ACK-NNRCIQERWKCDGDNDC-----LDNSDEAPELCYQHTCSAERFKCQ-NNRCIPLRW 997
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
LCD + DC D+ NT + +A C PN+ C +S +C+ +S CD DC +
Sbjct: 998 LCDGDNDCGNDEDESNT--------TCSARTCPPNQYPC-ASGRCIPISWTCDLDDDCGD 1048
Query: 369 GEDE 372
DE
Sbjct: 1049 RSDE 1052
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SVR+DGS V
Sbjct: 4102 KIETAAMDGTLRQTLVQENIQWPTGLAVDYFNERLYWADAKLSVIGSVRLDGSDPVV 4158
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 153/410 (37%), Gaps = 72/410 (17%)
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMH-------------GENRS 119
Q ++ L A + ++ S D+ P +D R EK G NR
Sbjct: 2435 QAPSIMRASLNGANVIVIIGS-DIKTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSNRY 2493
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV-----------ESVRVDGSHN--AVLCH 166
L+ P L + D ++W D V + +R D ++
Sbjct: 2494 VLLKNEPVHPFGLAV--YGDYIFWTDWVRRAVLRADKYTGGDMKVLRADIPQQPMGIIAV 2551
Query: 167 PNELRCGSSNQCVALSKFC--------DGKPDCSNGEDEGPFCNAECTP--------GQF 210
N+ + C + C DG+ +CS D+ + C+P F
Sbjct: 2552 ANDTNSCEFSPCRTNNGGCQDLCLPTSDGRVNCSCRGDQQLLEDNTCSPLNVSCGSVDGF 2611
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEM 269
CG G CI S CDG C + ++ + C ++ C G +C ++ +CI H++ CD
Sbjct: 2612 ECGNGDCINYSLTCDGMAHCKDKSDEKQSYCANRLCKKGYRRC-MNGRCIGHHFWCD--- 2667
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDED 328
TDD D++DE C G+ QC CI + CD+ ++C D ++ D
Sbjct: 2668 --GTDDCGDHSDELPCNMTLCKAGEFQCK-DGSCISNYSRCDQVVNCEDASDEMNCQPTD 2724
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
++F + C + C CDG DC + DE N D LKC
Sbjct: 2725 CSRFFRLGVK--GASFQNCEKTTLCYLPLWVCDGNNDCGDFSDE----RNCPDKRKLKC- 2777
Query: 389 HKCSPTPRGAMCFCPAGQ-NPNKTQCVDADEC---LIDGSCDQTCTNTHL 434
P A CP+G+ P C ++C + CD+ CT+T
Sbjct: 2778 ----PVNFFA---CPSGRCIPMSWTCDKENDCENGADETHCDKFCTSTQF 2820
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E++ + G R +V +I WP+ + IDY + +LYWCD+ + +E + ++ N L
Sbjct: 2114 RIERSRLDGSQRLVMVNASISWPNGISIDYEEGLLYWCDARTDKIERINLETGKNRELVL 2173
Query: 167 PN 168
N
Sbjct: 2174 GN 2175
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPG-QFSCG-MGKCIPE 220
CH +E +C C+ + CDG DC + DE C P +FSC +CI +
Sbjct: 1147 CHVDEFQCRMDGLCIPMRWRCDGDTDCMDLSDESNCEGVTHTCDPAVKFSCRDSARCISK 1206
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDN 279
+W CDG DC ED SDE N C CA + C+P LCD TDD D
Sbjct: 1207 AWVCDGDSDC-EDNSDEDNCEALVCKLSHHVCATNDSICLPPEKLCD-----GTDDCPDG 1260
Query: 280 TDE 282
+DE
Sbjct: 1261 SDE 1263
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 119/316 (37%), Gaps = 59/316 (18%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+W+ AP I +A ++G N ++ +I+ P+ L ID+ + LY+ D+ L+
Sbjct: 2428 FWTNWNEQAPSIM-------RASLNGANVIVIIGSDIKTPNGLAIDHRAEKLYFSDATLD 2480
Query: 150 TVESVRVDGSHNAVL-----CHPNELRCGS---------SNQCVALSKFCDGKPDCSNGE 195
+E DGS+ VL HP L + K+ G +
Sbjct: 2481 KIERCEYDGSNRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADKYTGGDMKVLRAD 2540
Query: 196 -DEGPFCNAECTPGQFSCGMGKCIPESWKC--------DGFVDC--------LEDGSDEP 238
+ P SC C + C DG V+C LED + P
Sbjct: 2541 IPQQPMGIIAVANDTNSCEFSPCRTNNGGCQDLCLPTSDGRVNCSCRGDQQLLEDNTCSP 2600
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQ 296
+G +C + CI ++ CD C D +DE + C G +
Sbjct: 2601 LNVSCGSVDG-FECG-NGDCINYSLTCDGMAHCK-----DKSDEKQSYCANRLCKKGYRR 2653
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++ +CI H++ CD TDD D++DE N LC E +C C++
Sbjct: 2654 C-MNGRCIGHHFWCD-----GTDDCGDHSDE-----LPCNMTLCKAGEFQC-KDGSCISN 2701
Query: 357 SKFCDGKPDCSNGEDE 372
CD +C + DE
Sbjct: 2702 YSRCDQVVNCEDASDE 2717
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 437 RVERCDMDGQNRTKLVDSKIVFPHGITLDLVNRLVYWADAYLDYIEVVDYEGKNRHTI 494
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-PEIFPLDERL 108
L H LA+++ RN ++ ++ RL + N ++ D P + PL +L
Sbjct: 1741 LPNAHGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLLGKL 1800
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G NR+ L T + P L IDY ++ LYW S +T+ ++DGS
Sbjct: 1801 YWTDGDSISMANMDGSNRTTLFTDQ-KGPVGLSIDYEKEQLYWISSGNSTINRCQLDGSK 1859
Query: 161 NAVL 164
+L
Sbjct: 1860 LEIL 1863
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 159 SHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
+HN V C N+ C C+ SKFC+G PDC++G DEGP C A+
Sbjct: 156 THNKVNQCPVNKYPCLDVEVCLHASKFCNGVPDCTDGWDEGPHCRAK 202
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T + WP+ L +DY + + W D+ + +
Sbjct: 1490 WDASLP-------RIEAASMSGEGRRTIHRETGSGGWPNGLTVDYMERRIVWIDARSDAI 1542
Query: 152 ESVRVDGS 159
S DGS
Sbjct: 1543 YSAMYDGS 1550
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + M+G N L ++ P L +D+ LYWCD +T+E +++G++ VL
Sbjct: 3165 IRRMHMNGSNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVL 3221
>gi|281337384|gb|EFB12968.1| hypothetical protein PANDA_010297 [Ailuropoda melanoleuca]
Length = 741
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE RC +C+AL CD DC +G DE C P F C CIP+ W C
Sbjct: 4 CAQNEFRC-QDGKCIALDFVCDSDRDCLDGSDEASCPMPTCGPASFQCNNSACIPDLWAC 62
Query: 225 DGFVDCLEDGSDE-------PNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCS 272
DG DC +DGSDE NT Q NG + C S +CI +W CD DC
Sbjct: 63 DGDPDC-KDGSDEWPQRCGGRNTSAPQRDNGPCSSLEFYCR-SGECIHSSWRCDGGPDCK 120
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + C+ E DC D +DE
Sbjct: 121 -----DKSDEENCTVATCRPDEFQCS-DGTCIHGSRQCNRENDCK-----DMSDE----L 165
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
N LC PN+ +C S +C+ L K C+ DC + DE +C + K CSH
Sbjct: 166 GCINVTLCEGPNKFKC-HSGECITLDKVCNSIRDCRDWSDEPLKECGTNECLDNKGGCSH 224
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G + ++ +C D DEC C Q C N SY C C EG+ L P
Sbjct: 225 ICNDLKMGYECLCPKGFRLVDQRRCEDIDECQDPDVCSQLCVNLEGSYKCDCEEGFQLDP 284
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 285 HTKACKAVG----NIAYLFFTNRHEVRKMTLDRS 314
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S
Sbjct: 433 WGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISS 484
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + + L HP L
Sbjct: 485 IDVNGGNRKIVLEDKKKLAHPFSL 508
>gi|345326425|ref|XP_001510419.2| PREDICTED: low-density lipoprotein receptor [Ornithorhynchus
anatinus]
Length = 872
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 162/379 (42%), Gaps = 85/379 (22%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C P E CG N+C++LS CD + DC NG DE C +F C GKCI +
Sbjct: 70 SVTCKPEEFSCGGRINRCISLSWKCDSQTDCENGSDEKYCPPKTCASDKFRCRNGKCISQ 129
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE-----------M 269
+ CD DC EDGSDE + + C QC S CIP W+CD +
Sbjct: 130 EFVCDKDNDC-EDGSDEESCPVPTCSPAMFQCNNS-ACIPKLWICDGDHDCDDGSDEWPQ 187
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
+C D V T C + C S++CI NW CD + DC D +DE
Sbjct: 188 NCHGHDKVKET-------KPCSLLEFHCG-SRECIHMNWQCDGDFDCK-----DKSDE-- 232
Query: 330 DKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
N V C P+E +C CV S+ CD + DC + DE GP
Sbjct: 233 -----QNCVKATCRPDEFQCNDGT-CVHGSRQCDKEYDCKDMSDEIGCANVTLCDGPNKF 286
Query: 375 ------------FCNNKADC-----ENLK-------------CSHKCSPTPRGAMCFCPA 404
CN DC E LK CSH C+ G C CP
Sbjct: 287 KCHSGECITQDKVCNAHRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKIGYECLCPD 346
Query: 405 G-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G Q ++ +C D DEC I +C Q C N SY C C EGY + P K+C A+
Sbjct: 347 GFQLVDQKRCEDIDECQIPETCSQICRNLEGSYKCECNEGYEIDPITKTCKAIGT----I 402
Query: 464 ASIIFSSTVDIRRIHLNGS 482
A + F++ ++R++ L+ S
Sbjct: 403 AYLFFTNRHEVRKMTLDRS 421
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + Q W
Sbjct: 480 DGIAVDWIHGNIYWTDSVPGTISVADTKGSKRKTLFKQELAKPRAIVVDPMQGFMYWTDW 539
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA ++EK G++G + PLVT+ IQWP+ L +D + LYW DS L+++ SV
Sbjct: 540 GTPA--------KIEKGGLNGVDSFPLVTEEIQWPNGLTLDLSNGRLYWVDSKLHSISSV 591
Query: 155 RVD-GSHNAVLCHPNEL 170
V+ G+ VL + N+L
Sbjct: 592 DVNGGNRKTVLENQNKL 608
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 18/149 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQC-ALSKKCIPH 261
+C +F C G+CI W CDG +CL++ + P+TC+ C + C +CI
Sbjct: 31 KCERNEFQCRDGRCISYKWICDGTAECLDESDESPDTCLSVTCKPEEFSCGGRINRCISL 90
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD + DC + +DE + C + + +C + KCI ++CD++ DC
Sbjct: 91 SWKCDSQTDCE-----NGSDEKYCPPKTCASDKFRCR-NGKCISQEFVCDKDNDCE---- 140
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
D +DE+ S C P +C +S
Sbjct: 141 -DGSDEE-----SCPVPTCSPAMFQCNNS 163
>gi|417357133|gb|AFX60885.1| low density lipoprotein receptor [Oryctolagus cuniculus]
Length = 847
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 151/333 (45%), Gaps = 39/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + C++ CDG+PDC +G DE + C P F C C+P W C
Sbjct: 106 CSQDEFRC-AEGACISRLFACDGEPDCPDGSDEASCAPSTCGPAHFRCNSSSCVPALWAC 164
Query: 225 DGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
DG DC +DGSDE P C + C S +C+ +W CD + DC
Sbjct: 165 DGEPDC-DDGSDEWPARCGARPSPQPGRGPCSRHEFHCG-SGECVHASWRCDGDADCR-- 220
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE C + QC+ CI + CD++ DC D +DE
Sbjct: 221 ---DGSDERDCAAATCRPDEFQCS-DGTCIHGSRQCDQQQDCG-----DMSDE----VGC 267
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCSHK 390
N LC P++ +C S +C++L K C+ DC + DE P N+ N CSH
Sbjct: 268 VNVTLCEGPDKFKC-HSGECISLDKVCNSARDCQDWSDE-PIKECATNECMRGNGGCSHT 325
Query: 391 CSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G C CP G ++ +C D +EC C Q C N SY C C G+ L P
Sbjct: 326 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 385
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
++C AV D A + F++ ++R++ L+ S
Sbjct: 386 SQACKAV----DSIAYLFFTNRHEVRKMTLDRS 414
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C + +C++ CDG +C +G DE + C FSCG + +CIP
Sbjct: 24 CGRNEFQC-RNGKCISYKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIPG 82
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCDG DC EDGSDE C + +CA CI + CD E DC D +
Sbjct: 83 HWKCDGQQDC-EDGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP-----DGS 135
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
DE C +C S C+P W CD E DC D+ ++W
Sbjct: 136 DEASCAPSTCGPAHFRCN-SSSCVPALWACDGEPDC------DDGSDEWPARCGARPSPQ 188
Query: 339 ----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E CG S +CV S CDG DC +G DE
Sbjct: 189 PGRGPCSRHEFHCG-SGECVHASWRCDGDADCRDGSDE 225
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALS-KKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 23 KCGRNEFQCRNGKCISYKWVCDGSSEC-QDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIP 81
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD + DC D +DE C + +CA CI + CD E DC
Sbjct: 82 GHWKCDGQQDCE-----DGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP--- 132
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D +DE S C P RC SS+ CV CDG+PDC +G DE P
Sbjct: 133 --DGSDE-----ASCAPSTCGPAHFRCNSSS-CVPALWACDGEPDCDDGSDEWP------ 178
Query: 381 DCENLKCSHKCSPTPRGAMC-----FCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
+C + SP P C C +G+ + + D D DGS ++ C
Sbjct: 179 ----ARCGARPSPQPGRGPCSRHEFHCGSGECVHASWRCDGDADCRDGSDERDCA 229
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A R ++L + ++ + A W +PA
Sbjct: 486 YWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMYWTDWGVPA-------- 537
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++EK G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 538 KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLE 597
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 598 DEQRLAHPFSL 608
>gi|301070472|gb|ADK55596.1| vitellogenin receptor [Macrobrachium rosenbergii]
Length = 1889
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 144/361 (39%), Gaps = 77/361 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----FCNAECTPGQFSCGMGKCIPE 220
C P+E RC SS CV+ + CDG DCS+G DE P N C ++C G+CIP
Sbjct: 975 CLPDEFRCSSSGHCVSRAWVCDGHKDCSDGSDEMPPECLGSNRTCRANFYACATGQCIPA 1034
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--------- 271
W CDG +C EDGSDE C C + C + CIP W CD DC
Sbjct: 1035 MWHCDGRKEC-EDGSDE-EGCPTGCPEHKFACN-NGDCIPDVWRCDGSADCKDGSDEHNC 1091
Query: 272 ---STDDIVDNTDEDWDKFHQCFNGQVQCAL----------------------------- 299
T V N E +C + +V CA+
Sbjct: 1092 TGLGTTKGVSNVTES-PLGPRCLDYEVPCAVPEGHSPICVHENSRCDGVYDCPDREDEMD 1150
Query: 300 ------------SKKCIPHNWLCDEEMDC--STDD-----------IVDNTDEDWDKYFS 334
+ +CIP W+C+ DC STD+ + ++ +
Sbjct: 1151 CGCEEDQFKCLYTDRCIPKIWICNGVSDCMDSTDESDCPSLPGATVVSEDASTTLPLTTN 1210
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
LC E C + QC+ + CDG DC +G DE C EN C H C
Sbjct: 1211 DGEWLCRKGEYAC-RNGQCIRRTMICDGSADCDDGSDEWNHCYQNCQKENGGCQHVCHSN 1269
Query: 395 PRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
C C G + + + C+D EC + +C CT SY CSC EGY+L PD ++
Sbjct: 1270 TDEVYCSCHRGFHLHIDGSSCLDDPECDEESTCSHYCTEMKGSYFCSCMEGYSLEPDRRT 1329
Query: 453 C 453
C
Sbjct: 1330 C 1330
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 155/325 (47%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + +C S +C+ S+ CDG CS+ DE C+ F C G+CI + + C
Sbjct: 31 CASFQWKCSSDGKCIDQSQRCDGYQHCSDLSDEND-CHGCDESRFFRCRNGECISKFFLC 89
Query: 225 DGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC D SDE C+ + C Q +C + C P W CD DC D++D
Sbjct: 90 DGHPDCT-DRSDEV-ACVEEESACPLQQFRCKGNNLCFPQLWRCDGAADCP-----DHSD 142
Query: 282 E-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
E D C Q +C + C+ +++C+ ++DC + DE + NA
Sbjct: 143 EEDCPAKPNCTEQQFRCG-NGVCVSLDYVCNGDLDCRGGE-----DEAHCETSRCNA--- 193
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+PN +C C+ K CDG+ DC++G DEG C+ + C+ CS +C TP G C
Sbjct: 194 NPNHYQC-KDGSCLEPEKVCDGRRDCADGSDEGGLCSRQ--CKVGDCSDQCYSTPGGPHC 250
Query: 401 FCPAGQNP-NKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVN 457
C G P ++ +C D DEC + S CD C N + CSC + Y+ L D ++C +
Sbjct: 251 ACLQGYFPLSEKECADVDECRGNVSVCDHFCQNIPGGFRCSCGDKYSLLLQDNRTCLS-- 308
Query: 458 VPQDEPASIIFSSTVDIRRIHLNGS 482
+ ++ + +IR I+LN +
Sbjct: 309 -DKQGYGFLVVAMNREIREIYLNAT 332
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 102/243 (41%), Gaps = 52/243 (21%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE----CTPGQFSC-GMG 215
N V C N CG+S++C+ S CDG PDC +G DE +AE C P +F C G
Sbjct: 927 NPVTCRKNFFSCGNSHECILNSFKCDGTPDCPDGSDEKNCSSAEERRTCLPDEFRCSSSG 986
Query: 216 KCIPESWKCDGFVDCLEDGSDE-PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C+ +W CDG DC DGSDE P C+ C CA + +CIP W CD +C
Sbjct: 987 HCVSRAWVCDGHKDC-SDGSDEMPPECLGSNRTCRANFYACA-TGQCIPAMWHCDGRKEC 1044
Query: 272 STDDIVDNTDEDW------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--------- 316
D +DE+ + C NG CIP W CD DC
Sbjct: 1045 E-----DGSDEEGCPTGCPEHKFACNNGD--------CIPDVWRCDGSADCKDGSDEHNC 1091
Query: 317 ---STDDIVDNTDEDWDKYFSHNAVLCHPNELRC----GSSNQCVALSKFCDGKPDCSNG 369
T V N E S C E+ C G S CV + CDG DC +
Sbjct: 1092 TGLGTTKGVSNVTE------SPLGPRCLDYEVPCAVPEGHSPICVHENSRCDGVYDCPDR 1145
Query: 370 EDE 372
EDE
Sbjct: 1146 EDE 1148
>gi|347967332|ref|XP_003436050.1| AGAP002186-PB [Anopheles gambiae str. PEST]
gi|333466345|gb|EGK96211.1| AGAP002186-PB [Anopheles gambiae str. PEST]
Length = 894
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 148/333 (44%), Gaps = 39/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWK 223
C +E CG+ +C+ CD DC + DE C P QF+C CI W+
Sbjct: 162 CRSDEFTCGNG-RCIQKRWVCDHDDDCGDKTDEDNCPTTTCDPLKQFACAENYCITSKWR 220
Query: 224 CDGFVDCLEDGSDE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD-- 275
CDG DC DGSDE P C + QC CI +W+CD E DC D
Sbjct: 221 CDGEPDC-PDGSDERGCANPPPPTFSTCLPLEYQCNDRITCIHRSWICDGEKDCPRGDDE 279
Query: 276 ---IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
I N C + Q QC K CI ++ C+ + DCS D +DE
Sbjct: 280 MPPICQNV--------TCRSDQFQCKKDKTCINGHFACNGKNDCS-----DGSDEQ--NC 324
Query: 333 FSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
+ + C+P E CG C+ L+K CD PDC +DE K +C N CS
Sbjct: 325 VNVRSEKCNPKTEFDCGGG-MCIPLAKVCDQNPDCPEFQDEPADKCGKNECLQGNGGCSQ 383
Query: 390 KCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP G C C P + + CVD DEC GSC Q+C N ++ C C + Y P
Sbjct: 384 LCVDTPAGFYCDCKPGFKLADNRTCVDIDECEEPGSCSQSCINEIGTFKCECMDNYLRDP 443
Query: 449 -DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D C P++ AS++F+ DIR+I L+
Sbjct: 444 RDHTRCK----PKEGHASLLFARRHDIRKISLD 472
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 154/387 (39%), Gaps = 98/387 (25%)
Query: 149 NTVESVRVDGS----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNA 203
+ V S+RV G C ++ RC + +C+ CDG+ DC++G DE C +
Sbjct: 46 SAVPSLRVFGKPSSSSEESSCPGDKFRC-KNGRCILKRWQCDGERDCADGSDEDAQQCQS 104
Query: 204 E-CTPGQFSC--GMGKCIPESWKCDGFVDCLEDGSDE-------------PNTCIHQ-CF 246
+ C+ +F+C G G CIP W CD DC DGSDE P ++ C
Sbjct: 105 KVCSSEEFTCRSGTGNCIPLGWMCDQNRDC-ADGSDEMSCSEYSLSLSNIPYLYYYETCR 163
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
+ + C + +CI W+CD + DC D TDED C + CI
Sbjct: 164 SDEFTCG-NGRCIQKRWVCDHDDDCG-----DKTDEDNCPTTTCDPLKQFACAENYCITS 217
Query: 307 NWLCDEEMDCSTDDIVDNTDEDW-----DKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
W CD E DC D +DE FS C P E +C C+ S CD
Sbjct: 218 KWRCDGEPDCP-----DGSDERGCANPPPPTFS----TCLPLEYQCNDRITCIHRSWICD 268
Query: 362 GKPDCSNGEDEGP--------------------------FCNNKADCE---------NLK 386
G+ DC G+DE P CN K DC N++
Sbjct: 269 GEKDCPRGDDEMPPICQNVTCRSDQFQCKKDKTCINGHFACNGKNDCSDGSDEQNCVNVR 328
Query: 387 CSHKCSPTPR----GAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCT 430
S KC+P G MC CP Q+ +C +ECL +G C Q C
Sbjct: 329 -SEKCNPKTEFDCGGGMCIPLAKVCDQNPDCPEFQDEPADKC-GKNECLQGNGGCSQLCV 386
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+T + C C G+ L D ++C ++
Sbjct: 387 DTPAGFYCDCKPGFKL-ADNRTCVDID 412
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 17/142 (11%)
Query: 41 DEDWDK--YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
DE DK K L + LA+++ + + I++ + + +L DL
Sbjct: 514 DEGSDKTVVVKDQLVTSDGLAVDWIYNHIYFTDIKKSTIELTNFD-GNMGKVLIQDDLEI 572
Query: 99 PEIFPLDE--------------RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
P LD R+E+AGM G +R +V+ ++WP+ + +D + +YW
Sbjct: 573 PRAIALDPIDGWMYWTDWGTNPRIERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWV 632
Query: 145 DSHLNTVESVRVDGSHNAVLCH 166
D+ LN + S DGS +V+ +
Sbjct: 633 DAKLNVISSCNYDGSKRSVILY 654
>gi|16549252|dbj|BAB70786.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 138/295 (46%), Gaps = 35/295 (11%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-----IHQ---CFNGQVQC 252
C C QF C G+CIP W CDG DC D SDE IH C + QC
Sbjct: 185 CVHSCFDNQFRCSSGRCIPGHWACDGDNDC-GDFSDEAQINCTKEEIHSPAGCNGNEFQC 243
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWL 309
C+P W CD E DC D +DE C + C + +CI W+
Sbjct: 244 HPDGNCVPDLWRCDGEKDCE-----DGSDEKGCNGTIRSCDHKTKFSCWSTGRCINKAWV 298
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSN 368
CD ++DC D +DED ++ LC P + C + ++ C+ K C+GK DC +
Sbjct: 299 CDGDIDCE-----DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPD 348
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSC 425
G DEG C+ + N CS+ CS P RG +C CP G NK C D C C
Sbjct: 349 GSDEGYLCD-ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKC 407
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 408 SQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 459
>gi|301771976|ref|XP_002921438.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-like [Ailuropoda melanoleuca]
Length = 855
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 152/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE RC +C+AL CD DC +G DE C P F C CIP+ W C
Sbjct: 107 CAQNEFRC-QDGKCIALDFVCDSDRDCLDGSDEASCPMPTCGPASFQCNNSACIPDLWAC 165
Query: 225 DGFVDCLEDGSDE-------PNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCS 272
DG DC +DGSDE NT Q NG + C S +CI +W CD DC
Sbjct: 166 DGDPDC-KDGSDEWPQRCGGRNTSAPQRDNGPCSSLEFYCR-SGECIHSSWRCDGGPDCK 223
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + C+ E DC D +DE
Sbjct: 224 -----DKSDEENCTVATCRPDEFQCS-DGTCIHGSRQCNRENDCK-----DMSDE----L 268
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
N LC PN+ +C S +C+ L K C+ DC + DE +C + K CSH
Sbjct: 269 GCINVTLCEGPNKFKC-HSGECITLDKVCNSIRDCRDWSDEPLKECGTNECLDNKGGCSH 327
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G + ++ +C D DEC C Q C N SY C C EG+ L P
Sbjct: 328 ICNDLKMGYECLCPKGFRLVDQRRCEDIDECQDPDVCSQLCVNLEGSYKCDCEEGFQLDP 387
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 388 HTKACKAVG----NIAYLFFTNRHEVRKMTLDRS 417
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 96/216 (44%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPESW 222
C NE +C +C++ CDG +C + DE + C G + +CIP+ W
Sbjct: 27 CGRNEFQC-QDGKCISYKWVCDGSAECLDASDESQETCMSVTCKSGDXGGRVNRCIPQPW 85
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CDG VDC E+GSDE C + +C KCI +++CD + DC +D +DE
Sbjct: 86 RCDGQVDC-ENGSDEQGCLPRTCAQNEFRCQ-DGKCIALDFVCDSDRDC-----LDGSDE 138
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C QC S CIP W CD + DC D +DE + N
Sbjct: 139 ASCPMPTCGPASFQCNNS-ACIPDLWACDGDPDCK-----DGSDEWPQRCGGRNTSAPQR 192
Query: 343 NELRCGS------SNQCVALSKFCDGKPDCSNGEDE 372
+ C S S +C+ S CDG PDC + DE
Sbjct: 193 DNGPCSSLEFYCRSGECIHSSWRCDGGPDCKDKSDE 228
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 75/170 (44%), Gaps = 17/170 (10%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C +F C GKCI W CDG +CL+ + TC+ +CIP W
Sbjct: 27 CGRNEFQCQDGKCISYKWVCDGSAECLDASDESQETCMSVTCKSGDXGGRVNRCIPQPWR 86
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
CD ++DC + +DE C + +C KCI +++CD + DC +D
Sbjct: 87 CDGQVDCE-----NGSDEQGCLPRTCAQNEFRCQ-DGKCIALDFVCDSDRDC-----LDG 135
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+DE S C P +C +S C+ CDG PDC +G DE P
Sbjct: 136 SDE-----ASCPMPTCGPASFQCNNS-ACIPDLWACDGDPDCKDGSDEWP 179
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + + L HP L
Sbjct: 588 IDVNGGNRKIVLEDKKKLAHPFSL 611
>gi|377834386|ref|XP_003689479.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Mus musculus]
Length = 1974
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 145/336 (43%), Gaps = 50/336 (14%)
Query: 164 LCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-----GKC 217
+CH P +C ++C+ CDG CS+G DE +C C M +C
Sbjct: 804 ICHQPGVFQCLDGSRCIEERYHCDGAQHCSDGSDE-----LDCWRPADDCSMRCDNKTRC 858
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
IP+SW+CDG DCL D DE +C + + QC + +CI + CD + DC
Sbjct: 859 IPKSWRCDGKPDCL-DRRDEQGCFHEKCSSPEFQCE-NGQCISSSLRCDGDRDCLDHSDE 916
Query: 272 ---------STDDIVDNTDEDWD------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ D E+W K C Q C +C+P W CD + DC
Sbjct: 917 EGCPVAWVPTVPRRRDEVPEEWRMCDCGLKVISCGPRQWACDSGDQCVPDFWHCDGQRDC 976
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D +DE C +E +C ++ C++ S CDG+ DC +G DEG C
Sbjct: 977 R-----DGSDEA-----GCAPQKCQDSEFQC-ATGACLSFSMVCDGREDCVDGSDEGGEC 1025
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGS--CDQTCTNT 432
++ C C H C +P G +C C G N C D +EC C QTC NT
Sbjct: 1026 SSSV-CSPGLCYHSCYQSPTGPVCVCAPGFELESNGQICQDVNECQQPSGQPCSQTCINT 1084
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
SY+C+C GY L PDG +C A SI F
Sbjct: 1085 EGSYICACHPGYLLGPDGHTCKATGAEPILLVSIEF 1120
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 200 FCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
C EC Q +CG KCIP +W C+G +C DG+DE + C + +++C +C
Sbjct: 3 LCELECNRTRQVACGE-KCIPVAWLCNGEQEC-PDGTDELCESLTACPDYKIRCPGKAQC 60
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEM 314
+ CD + C I K H +C GQ QC ++ CI +W CD
Sbjct: 61 LDAGEPCDAQQSCEDGSI---------KAHCPHIRCLAGQWQCQ-NRACIMDSWRCD--- 107
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D D +DE + C + C S +C+ S CDG+ DC++G DE
Sbjct: 108 --GIDHCGDASDE-------RDCASCPEGTVSC-DSGKCIPESLMCDGRADCTDGADEPR 157
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADEC-LIDGSCDQTCTN 431
C N C CS T G C C G P+ C D DEC L G C Q C N
Sbjct: 158 TCGKNCSLLNGGCEGPCSNTHWGVRCSCTPGWQLQPDGWSCGDVDECSLPYGPCGQLCHN 217
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
T SY C C +G+ L +G C D+ I+ ++ ++R
Sbjct: 218 TPGSYSCGCIQGHQLY-NGTDCRVT----DDDVKILIATDKELR 256
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++RC QC+ + CD + C +G + + C GQ+ C CI +SW+C
Sbjct: 47 CPDYKIRCPGKAQCLDAGEPCDAQQSCEDGSIKAHCPHIRCLAGQWQCQNRACIMDSWRC 106
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG C D SDE + C G V C S KCIP + +CD DC+
Sbjct: 107 DGIDHC-GDASDERDCA--SCPEGTVSCD-SGKCIPESLMCDGRADCT 150
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 118/305 (38%), Gaps = 76/305 (24%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C V C K CIP LC+ E DC D +DE K H + F
Sbjct: 766 CARSSVPCQDGKGCIPRESLCNGEADCQ-----DGSDE------KNCFQICHQPGV-FQC 813
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
+ S C ++ + + C+ +D L+ W P D+ M +N++ + K
Sbjct: 814 LDGSRCIEERYHCDGAQ-HCSDGSDELDCWR-------PADD----CSMRCDNKTRCIPK 861
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
+ + CD + ++ G + P E +C + QC++ S
Sbjct: 862 S----------------WRCDGKPDCLDRRDEQGCFHEKCSSP-EFQC-ENGQCISSSLR 903
Query: 185 CDGKPDCSNGEDEG---------------------PFCN-----AECTPGQFSCGMG-KC 217
CDG DC + DE C+ C P Q++C G +C
Sbjct: 904 CDGDRDCLDHSDEEGCPVAWVPTVPRRRDEVPEEWRMCDCGLKVISCGPRQWACDSGDQC 963
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+P+ W CDG DC DGSDE +C + + QCA + C+ + +CD DC V
Sbjct: 964 VPDFWHCDGQRDC-RDGSDEAGCAPQKCQDSEFQCA-TGACLSFSMVCDGREDC-----V 1016
Query: 278 DNTDE 282
D +DE
Sbjct: 1017 DGSDE 1021
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ R+E+AGM G +R LV + + P+S+ +D ++W D + + SV +DGS +++
Sbjct: 1253 EPRIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMM 1312
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E AGM G +R L + P L +D+ LYW + ++E+V VD S
Sbjct: 381 IETAGMDGSDRKMLAVVTTEGPLGLTLDHVTGRLYWISGYKESIETVNVDSS 432
>gi|427794773|gb|JAA62838.1| Putative low-density lipoprotein receptor, partial [Rhipicephalus
pulchellus]
Length = 938
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 117/365 (32%), Positives = 159/365 (43%), Gaps = 72/365 (19%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFC---------------------- 201
C P++ C S C+ ++ CDG+ DC +G DE C
Sbjct: 166 CSPDQFACKSHEGVCIPITWRCDGQEDCIDGSDEKDHCSAVTCTQEEFSCDNGKCITQRW 225
Query: 202 ------------------NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE---PNT 240
N C+ +F C G+CIP+ W+CD VDCL DGSDE P
Sbjct: 226 KCDQDDDCGDGSDERGCPNVTCSSAEFMCSNGRCIPDRWRCDRDVDCL-DGSDERNCPTD 284
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C + QCA C+ +W CD + DC D +DE + + C Q QCA +
Sbjct: 285 RPSTCKEREFQCANGVDCVHASWQCDGDPDCP-----DESDEA-NCTNTCRPDQFQCA-N 337
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKF 359
CIP C+ + +C D +DED + C P+ E CG N C+ +
Sbjct: 338 MHCIPGQLECNGQAECH-----DGSDED----HCNTTKPCDPHTEFDCG-GNHCIPKALV 387
Query: 360 CDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVD 415
CDGK DC EDE ++ +C +N CS C P G C C G + C D
Sbjct: 388 CDGKNDCGAYEDEPKDRCHENECAKDNGGCSDICRDDPVGFHCECKPGFRLTEDGKTCDD 447
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC GSC QTC NT + C C EGY L P D C A ++ ++F++ DI
Sbjct: 448 VDECATPGSCSQTCINTKGGFKCECIEGYMLEPRDHHRCKA----KEGVPYLLFANRNDI 503
Query: 475 RRIHL 479
R+I+L
Sbjct: 504 RKINL 508
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 164/432 (37%), Gaps = 98/432 (22%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
AG+ + SP ++W + + ++ L TV V + C ++
Sbjct: 31 AGVLRGSASPTSMGALRWSILPLRSTSSLVVVSFAIVLITVACCGVRTVDASSQCSTSQF 90
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
+C +C+ + CD + DC +G DE C+ +F+C G CIP W+CD DC
Sbjct: 91 KCARHEKCIPKTWRCDDENDCGDGSDEENCEKRTCSEMEFACANGHCIPSRWQCDNEPDC 150
Query: 231 LEDGSDEPNTCIHQ-CFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDNTDED----- 283
+ ++ C ++ C Q C + CIP W CD + DC +D +DE
Sbjct: 151 DDRSDEDLAICKNKTCSPDQFACKSHEGVCIPITWRCDGQEDC-----IDGSDEKDHCSA 205
Query: 284 ---WDKFHQCFNGQ-------------------------VQCALSK------KCIPHNWL 309
+ C NG+ V C+ ++ +CIP W
Sbjct: 206 VTCTQEEFSCDNGKCITQRWKCDQDDDCGDGSDERGCPNVTCSSAEFMCSNGRCIPDRWR 265
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD ++DC +D +DE + C E +C + CV S CDG PDC +
Sbjct: 266 CDRDVDC-----LDGSDE--RNCPTDRPSTCKEREFQCANGVDCVHASWQCDGDPDCPDE 318
Query: 370 EDEG----------------------PFCNNKADCENLKCSHKCSPT------------- 394
DE CN +A+C + C+ T
Sbjct: 319 SDEANCTNTCRPDQFQCANMHCIPGQLECNGQAECHDGSDEDHCNTTKPCDPHTEFDCGG 378
Query: 395 ----PRGAMC----FCPAGQNPNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYT 445
P+ +C C A ++ K +C + +EC D G C C + + + C C G+
Sbjct: 379 NHCIPKALVCDGKNDCGAYEDEPKDRCHE-NECAKDNGGCSDICRDDPVGFHCECKPGFR 437
Query: 446 LRPDGKSCTAVN 457
L DGK+C V+
Sbjct: 438 LTEDGKTCDDVD 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G +RS +VT +I WP+ L ID+ L+W D+ L+ + S DGSH V+
Sbjct: 632 KIERAGMDGSHRSAIVTTDILWPNGLTIDFLTKRLFWVDAKLHLISSADYDGSHRRVV 689
>gi|74205242|dbj|BAE23143.1| unnamed protein product [Mus musculus]
Length = 721
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/357 (31%), Positives = 158/357 (44%), Gaps = 76/357 (21%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
QCV CDG PDC +G DE P N C+ +F+C G+C+ ++ C+G DC +D
Sbjct: 82 GQCVPNRWQCDGDPDCEDGSDESPEQCRNITCSADEFTCSSGRCVSRNFVCNGQDDC-DD 140
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------- 286
GSDE + C + QC+ S CIP +W+CD++ DCS D +DE ++
Sbjct: 141 GSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDESLEQCGRQPVI 194
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+C ++QC S +CI W CD + DC D +DE + + C P++
Sbjct: 195 HTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCRPDQFE 243
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FCNNKAD 381
C C+ S+ C+G DC +G DE GP C+ + D
Sbjct: 244 C-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQD 302
Query: 382 CE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLID 422
C N CSH C G C C AG + ++ C D DEC
Sbjct: 303 CRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNP 362
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G C Q C N Y C C+ GY + C AV EP S+IF++ DIR+I L
Sbjct: 363 GICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRRDIRKIGL 415
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 154/348 (44%), Gaps = 64/348 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+P W+CDG DC EDGSDE P C + C + C+ S +C+ N++C+ + DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCRNITCSADEFTCS-SGRCVSRNFVCNGQDDCD--- 139
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C + QC+ S CIP +W+CD++ DCS D +DE ++
Sbjct: 140 --DGSDELDCAPPTCGAHEFQCSTS-SCIPLSWVCDDDADCS-----DQSDESLEQCGRQ 191
Query: 336 NAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCN-NKADCENLKCS 388
+ C +E++CG S +C+ CDG PDC +G DE C ++ +CE+ C
Sbjct: 192 PVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCI 250
Query: 389 H---KCSPT------------PRGAMCFCPAGQNPNKTQCVDA----------------- 416
H +C+ C P +C+D
Sbjct: 251 HGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEP 310
Query: 417 ------DECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ECL+ +G C C + + Y C C G+ L D K+C ++
Sbjct: 311 LKECHINECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDRKTCGDID 357
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 456 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 514
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 515 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 574
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 575 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 602
>gi|4504975|ref|NP_000518.1| low-density lipoprotein receptor isoform 1 precursor [Homo sapiens]
gi|126073|sp|P01130.1|LDLR_HUMAN RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|307121|gb|AAA56833.1| low density lipoprotein receptor [Homo sapiens]
gi|15680298|gb|AAH14514.1| Low density lipoprotein receptor [Homo sapiens]
gi|21629648|gb|AAM56036.1| low density lipoprotein receptor [Homo sapiens]
gi|30583561|gb|AAP36025.1| low density lipoprotein receptor (familial hypercholesterolemia)
[Homo sapiens]
gi|32187681|gb|AAP72971.1| low density lipoprotein receptor [Homo sapiens]
gi|61362288|gb|AAX42194.1| low density lipoprotein receptor [synthetic construct]
gi|119604575|gb|EAW84169.1| low density lipoprotein receptor (familial hypercholesterolemia),
isoform CRA_b [Homo sapiens]
gi|119604577|gb|EAW84171.1| low density lipoprotein receptor (familial hypercholesterolemia),
isoform CRA_b [Homo sapiens]
gi|123994407|gb|ABM84805.1| low density lipoprotein receptor (familial hypercholesterolemia)
[synthetic construct]
gi|225131047|gb|ACN81317.1| low density lipoprotein receptor [Homo sapiens]
Length = 860
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTILEDEKRLAHPFSL 611
>gi|32880123|gb|AAP88892.1| low density lipoprotein receptor (familial hypercholesterolemia)
[synthetic construct]
gi|60653923|gb|AAX29654.1| low density lipoprotein receptor [synthetic construct]
Length = 861
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTILEDEKRLAHPFSL 611
>gi|307775414|ref|NP_001182728.1| low-density lipoprotein receptor isoform 3 precursor [Homo sapiens]
gi|194390612|dbj|BAG62065.1| unnamed protein product [Homo sapiens]
Length = 819
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 68 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 126
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 127 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 182
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 183 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 229
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 230 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 288
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 289 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 348
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 349 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 376
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 82/190 (43%), Gaps = 37/190 (19%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------PNTCIH---QCFNG 248
G C +F C GKCI W CDG +C +DGSDE P TC +C +G
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCSPKTCSQDEFRCHDG 78
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
KCI ++CD + DC +D +DE C QC S CIP W
Sbjct: 79 --------KCISRQFVCDSDRDC-----LDGSDEASCPVLTCGPASFQCN-SSTCIPQLW 124
Query: 309 LCDEEMDCSTDDIVDNTDEDWDK------YFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CD + DC D +DE W + F ++ C E C S +C+ S CDG
Sbjct: 125 ACDNDPDCE-----DGSDE-WPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDG 177
Query: 363 KPDCSNGEDE 372
PDC + DE
Sbjct: 178 GPDCKDKSDE 187
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 495 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 546
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 547 IDVNGGNRKTILEDEKRLAHPFSL 570
>gi|6691161|gb|AAF24515.1| low density lipoprotein receptor [Homo sapiens]
Length = 837
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 86 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 144
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 145 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 200
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 201 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 247
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 248 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 306
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 307 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 366
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 367 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 394
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 4 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 62
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 63 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 115
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 116 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 168
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 169 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 205
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 3 RCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 61
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI ++CD + DC
Sbjct: 62 QFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC---- 111
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 112 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 158
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 513 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 564
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 565 IDVNGGNRKTILEDEKRLAHPFSL 588
>gi|74796184|sp|Q6X0I2.1|VGR_SOLIN RecName: Full=Vitellogenin receptor; Short=SiVgR; Flags: Precursor
gi|42521628|gb|AAP92450.1| vitellogenin receptor [Solenopsis invicta]
Length = 1782
Score = 124 bits (311), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 150/368 (40%), Gaps = 73/368 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + C+ +K CD PDC + DE ECT +F C GKCIP ++ C
Sbjct: 1013 CKSDEFQCKFTETCIPKTKMCDSNPDCDDLSDEEDCRKVECTSNEFKCNNGKCIPNTFVC 1072
Query: 225 DGFVDCLEDGSDE-------------------PNT-----------------------CI 242
D DC EDG DE PN C+
Sbjct: 1073 DNDNDC-EDGEDEAAEKCYSKIACKMPKMFKCPNGDCISDSLLCNGINDCNDGSDEVHCL 1131
Query: 243 HQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
V C+L++ C+P N CD + DC D D CF +
Sbjct: 1132 SNVTTHLVNCSLNEYRCLGTDICLPKNVRCDGKNDCPQSD-------DEQNCTYCFENEF 1184
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C +K+CIP W+CD+ DC + N D + N +E +C S C+
Sbjct: 1185 ACD-NKRCIPELWVCDKANDCGDNSDEKNCDGSKRNFIESNEC----DEFKC-SVGTCLP 1238
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQC 413
SK CDG DC +G DE C N C C TP GA+C C +G + C
Sbjct: 1239 YSKVCDGNRDCPDGSDETGKCQTACTVNNF-CKGMCYKTPAGAVCGCQSGYRLAVDMISC 1297
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST-V 472
D +EC +D C Q C NT SY C C + + +R D SC AV PA + T
Sbjct: 1298 EDINECELD-ICSQMCRNTIGSYECFCKDEFIIRNDKTSCKAVG-----PAMEFITVTDN 1351
Query: 473 DIRRIHLN 480
DIR++ N
Sbjct: 1352 DIRKMTHN 1359
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 34/293 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-------QCFNGQVQCALS 255
+C G F C G+CIP KCD ++D DGSDE C H C Q +C +
Sbjct: 34 TKCEDGYFQCNSGECIPVDKKCD-YIDHCIDGSDEDFECDHLDEKSFITCAKDQFKCK-N 91
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
++CIP CD DC +D +DE D H + C CI W+CD
Sbjct: 92 QECIPAAKYCDMVNDC-----LDESDEHDGCVKHLNCTNKFLCT-DGHCINKEWVCDGRN 145
Query: 315 DCSTDDIVDNTDE---DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
DC D DE +K S ++ + C ++++C++L CD K DC +G D
Sbjct: 146 DCP-----DGNDEWNCKANKTSSASSCKTENYQYMC-ANHRCISLKVVCDKKDDCGDGSD 199
Query: 372 EGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQT 428
EGP C + +C + C C TP+G++C C G Q N+T C D DEC G CDQ
Sbjct: 200 EGPGCT-QFNCSSAGCQSNCHQTPKGSVCTCKPGYKLQKDNRT-CNDIDECQAYGICDQD 257
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C N SY C+C Y L D ++C A + A+++FS+ I +H++
Sbjct: 258 CMNVPGSYACTCQREYYLENDKRTCKA----RAGEATLVFSTRTSILGMHVDS 306
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPESW 222
C NE +C N C+ ++ CDG +C NGEDE C C QF C G CI
Sbjct: 932 CSKNEYKCSEHNICIQRNQLCDGIENCPNGEDETSECRIKGRCKENQFMCKNGDCIRLKD 991
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+C+ DC D SDE N +C + + QC ++ CIP +CD DC DD+ D +E
Sbjct: 992 RCNSRYDC-TDQSDEQNCEKPKCKSDEFQCKFTETCIPKTKMCDSNPDC--DDLSD--EE 1046
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K +C + + +C + KCIP+ ++CD + DC D DE +K +S A P
Sbjct: 1047 DCRKV-ECTSNEFKCN-NGKCIPNTFVCDNDNDCE-----DGEDEAAEKCYSKIACK-MP 1098
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C + + C++ S C+G DC++G DE
Sbjct: 1099 KMFKCPNGD-CISDSLLCNGINDCNDGSDE 1127
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
FP + AGM G+N V ++WP S+ IDY + LYW D+ +ESVR+DG+
Sbjct: 427 FP---HIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAKSKMIESVRLDGTDR 483
Query: 162 AVLCH 166
++ H
Sbjct: 484 RIVLH 488
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C NE RC ++ C+ + CDGK DC +DE C +F+C +CIPE W
Sbjct: 1139 VNCSLNEYRCLGTDICLPKNVRCDGKNDCPQSDDEQNC--TYCFENEFACDNKRCIPELW 1196
Query: 223 KCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CD DC D SDE N I + +C++ C+P++ +CD DC
Sbjct: 1197 VCDKANDC-GDNSDEKNCDGSKRNFIESNECDEFKCSVG-TCLPYSKVCDGNRDC 1249
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 120/313 (38%), Gaps = 75/313 (23%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE--SVRVDGS--H 160
D R+ ++G+ + + N+ W S Q+ LY + +V+ +V D S +
Sbjct: 804 DTRILRSGLKSPHSLTVAGDNLFWIES------QNKLYSTNFRTASVKQKTVEFDLSKLN 857
Query: 161 NAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ + P L S + V L K K DC C+ C P + + C
Sbjct: 858 DNMTSLPGHLTPYSRDAQYVVTLRKDDIPKHDCQKNNGN---CSHVCLPSLITSFICACP 914
Query: 219 PESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDC----- 271
P + S++ TCI H+C + +C+ CI N LCD +C
Sbjct: 915 PGM-----------ELSNDNRTCISHHECSKNEYKCSEHNICIQRNQLCDGIENCPNGED 963
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
S D D +DE + +C + + QC +
Sbjct: 964 ETSECRIKGRCKENQFMCKNGDCIRLKDRCNSRYDCTDQSDEQNCEKPKCKSDEFQCKFT 1023
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+ CIP +CD DC DD+ D +ED K V C NE +C ++ +C+ + C
Sbjct: 1024 ETCIPKTKMCDSNPDC--DDLSD--EEDCRK------VECTSNEFKC-NNGKCIPNTFVC 1072
Query: 361 DGKPDCSNGEDEG 373
D DC +GEDE
Sbjct: 1073 DNDNDCEDGEDEA 1085
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPE 220
+ C ++ +C + +C+ +K+CD DC + DE C + CT +F C G CI +
Sbjct: 80 ITCAKDQFKC-KNQECIPAAKYCDMVNDCLDESDEHDGCVKHLNCT-NKFLCTDGHCINK 137
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCF--------NGQVQCALSKKCIPHNWLCDEEMDC 271
W CDG DC DG+DE N ++ N Q CA + +CI +CD++ DC
Sbjct: 138 EWVCDGRNDC-PDGNDEWNCKANKTSSASSCKTENYQYMCA-NHRCISLKVVCDKKDDC 194
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
C NE +C N C+ ++ CDG +C NGEDE C K C+
Sbjct: 932 CSKNEYKCSEHNICIQRNQLCDGIENCPNGEDETSECRIKGRCK 975
>gi|195131081|ref|XP_002009979.1| GI14944 [Drosophila mojavensis]
gi|193908429|gb|EDW07296.1| GI14944 [Drosophila mojavensis]
Length = 2119
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 160/365 (43%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG+ DC + DE + CT F+C G CI +++CDG DC +D SDE
Sbjct: 393 CIPRQWVCDGENDCKDYSDEAHCNRSSCTDEHFTCNDGYCISLAFRCDGERDC-DDNSDE 451
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 452 LKCPAVINSCPEGEFKCRSGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCQQ 506
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K QC +G+ +CA CIP W CD+E DC + + D + + C P+E
Sbjct: 507 KPSQCTSGEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGNMSPEHPLTCGPDEF 561
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C + +C+ + CDG PDCS+ EDE G F C K + NLK
Sbjct: 562 TC-HNGRCILRTWLCDGYPDCSSAEDEVDCHLLCDAGQFLCPAKKNITNLKICVHQKHVC 620
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C T RG C C G + NK C D D
Sbjct: 621 DGQNDCPLGEDEVNCPVEQKCPEPQQCEQLCIKTARGRDECACRLGYLMHANKRNCTDID 680
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+VCSC GY LRPD ++C A+ +++ ++ DIR
Sbjct: 681 ECQYLTSPVCSQKCHNTLGSFVCSCEMGYILRPDLRTCKALG----GAMTLLVANRWDIR 736
Query: 476 RIHLN 480
R+ L+
Sbjct: 737 RVTLS 741
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G +R + +K + WP+ L IDY++ LY+ D T+E++ DGS+ V
Sbjct: 1178 IERANMDGASRVIIASKKLIWPNGLAIDYDEHKLYFVDGGTKTLENMNFDGSNRKVIING 1237
Query: 164 LCHPNEL 170
L HP L
Sbjct: 1238 LGHPFGL 1244
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E+A M G R +++K + WP+ L IDY +YW D+ + +E +DGS
Sbjct: 863 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECSNLDGS 915
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN---- 161
++E++ + G RS +VT N+ WP+ L +D +YW D+ T++S G+
Sbjct: 1480 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDALRKTIDSCDYTGNQRKLIM 1539
Query: 162 AVLCHPNEL 170
+ L HP L
Sbjct: 1540 SALHHPYAL 1548
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1438 IEVATLDGNNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1497
Query: 167 PN 168
N
Sbjct: 1498 AN 1499
>gi|347967334|ref|XP_307995.5| AGAP002186-PA [Anopheles gambiae str. PEST]
gi|333466344|gb|EAA03795.5| AGAP002186-PA [Anopheles gambiae str. PEST]
Length = 1083
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/333 (33%), Positives = 148/333 (44%), Gaps = 39/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWK 223
C +E CG+ +C+ CD DC + DE C P QF+C CI W+
Sbjct: 162 CRSDEFTCGNG-RCIQKRWVCDHDDDCGDKTDEDNCPTTTCDPLKQFACAENYCITSKWR 220
Query: 224 CDGFVDCLEDGSDE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD-- 275
CDG DC DGSDE P C + QC CI +W+CD E DC D
Sbjct: 221 CDGEPDC-PDGSDERGCANPPPPTFSTCLPLEYQCNDRITCIHRSWICDGEKDCPRGDDE 279
Query: 276 ---IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
I N C + Q QC K CI ++ C+ + DCS D +DE
Sbjct: 280 MPPICQNV--------TCRSDQFQCKKDKTCINGHFACNGKNDCS-----DGSDEQ--NC 324
Query: 333 FSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
+ + C+P E CG C+ L+K CD PDC +DE K +C N CS
Sbjct: 325 VNVRSEKCNPKTEFDCGGG-MCIPLAKVCDQNPDCPEFQDEPADKCGKNECLQGNGGCSQ 383
Query: 390 KCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP G C C P + + CVD DEC GSC Q+C N ++ C C + Y P
Sbjct: 384 LCVDTPAGFYCDCKPGFKLADNRTCVDIDECEEPGSCSQSCINEIGTFKCECMDNYLRDP 443
Query: 449 -DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D C P++ AS++F+ DIR+I L+
Sbjct: 444 RDHTRCK----PKEGHASLLFARRHDIRKISLD 472
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 154/387 (39%), Gaps = 98/387 (25%)
Query: 149 NTVESVRVDGS----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNA 203
+ V S+RV G C ++ RC + +C+ CDG+ DC++G DE C +
Sbjct: 46 SAVPSLRVFGKPSSSSEESSCPGDKFRC-KNGRCILKRWQCDGERDCADGSDEDAQQCQS 104
Query: 204 E-CTPGQFSC--GMGKCIPESWKCDGFVDCLEDGSDE-------------PNTCIHQ-CF 246
+ C+ +F+C G G CIP W CD DC DGSDE P ++ C
Sbjct: 105 KVCSSEEFTCRSGTGNCIPLGWMCDQNRDC-ADGSDEMSCSEYSLSLSNIPYLYYYETCR 163
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
+ + C + +CI W+CD + DC D TDED C + CI
Sbjct: 164 SDEFTCG-NGRCIQKRWVCDHDDDCG-----DKTDEDNCPTTTCDPLKQFACAENYCITS 217
Query: 307 NWLCDEEMDCSTDDIVDNTDEDW-----DKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
W CD E DC D +DE FS C P E +C C+ S CD
Sbjct: 218 KWRCDGEPDCP-----DGSDERGCANPPPPTFS----TCLPLEYQCNDRITCIHRSWICD 268
Query: 362 GKPDCSNGEDEGP--------------------------FCNNKADCE---------NLK 386
G+ DC G+DE P CN K DC N++
Sbjct: 269 GEKDCPRGDDEMPPICQNVTCRSDQFQCKKDKTCINGHFACNGKNDCSDGSDEQNCVNVR 328
Query: 387 CSHKCSPTPR----GAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCT 430
S KC+P G MC CP Q+ +C +ECL +G C Q C
Sbjct: 329 -SEKCNPKTEFDCGGGMCIPLAKVCDQNPDCPEFQDEPADKC-GKNECLQGNGGCSQLCV 386
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+T + C C G+ L D ++C ++
Sbjct: 387 DTPAGFYCDCKPGFKL-ADNRTCVDID 412
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R +V+ ++WP+ + +D + +YW D+ LN + S DGS +V+ +
Sbjct: 595 RIERAGMDGTHRQVIVSYEVKWPNGITLDLVRKRVYWVDAKLNVISSCNYDGSKRSVILY 654
>gi|410219634|gb|JAA07036.1| low density lipoprotein receptor [Pan troglodytes]
gi|410219636|gb|JAA07037.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265130|gb|JAA20531.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265132|gb|JAA20532.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265134|gb|JAA20533.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265136|gb|JAA20534.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265138|gb|JAA20535.1| low density lipoprotein receptor [Pan troglodytes]
gi|410265140|gb|JAA20536.1| low density lipoprotein receptor [Pan troglodytes]
Length = 860
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 LNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++ F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTVLEDEKRLAHPFSL 611
>gi|307775412|ref|NP_001182727.1| low-density lipoprotein receptor isoform 2 precursor [Homo sapiens]
gi|168277632|dbj|BAG10794.1| low-density lipoprotein receptor precursor [synthetic construct]
Length = 858
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTILEDEKRLAHPFSL 611
>gi|345481629|ref|XP_001605666.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Nasonia vitripennis]
Length = 1996
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 152/337 (45%), Gaps = 52/337 (15%)
Query: 178 CVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
C+ C+G+ DC++G DE +C QF C +CI +S++CDG DC DGS
Sbjct: 383 CIYDELRCNGQKDCADGSDELKCELLEVQCKENQFQCAYPRCISQSYRCDGEDDC-GDGS 441
Query: 236 DE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
DE P + C + +CA S CI W+CD E+DC D D D + C +
Sbjct: 442 DEENCPTAGDNSCSTNEFRCA-SGSCISKKWVCDHEIDCK--DGEDEMDCHYPAPETCAS 498
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDD---------------------IVDNTDEDWDK 331
+ + CIP W+CD DCST + V++T K
Sbjct: 499 NEEFTCSTGVCIPRTWVCDGVPDCSTGEDERGCQMGCELTHFLCKTPTLAVNDT-----K 553
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC-ENLKCSHK 390
+ +L +P + CV++ CDG DC +DE C K +C EN CS
Sbjct: 554 PIPGHWMLLNPRD----QHRVCVSMKHVCDGVADCPEKDDE-ENCPKKVECTENDHCSQL 608
Query: 391 CSPTP-RGAMCFCPAG---QNPNKTQCVDADECLI--DGSCDQTCTNTHLSYVCSCTEGY 444
C T C C G NKT C D DEC D C Q C NT S+VC C GY
Sbjct: 609 CVVTSDNQRACSCDPGYVLAKDNKT-CEDIDECKFEKDPVCSQVCKNTKGSFVCECAPGY 667
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
LRPD +SC A+ +++ ++ VDIR++ + G
Sbjct: 668 VLRPDLRSCKALGA----NPTLLLANRVDIRQVSITG 700
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 104/221 (47%), Gaps = 30/221 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGED-------EGPFCNAECTPGQFSC---G 213
+C ++ C S+ C+A C+G+ DC N +D EG N C G+ S
Sbjct: 241 ICTSDQFLCISTCTCIARENRCNGEMDCENDDDELNCEGYEGHHLNETCH-GKRSVRCPN 299
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GKCI + W CDG DC D SDE + + C Q +C + C+P NW+CD E DC
Sbjct: 300 SGKCIAKEWLCDGDNDC-GDFSDESHCGPQKNCTAEQFECR-NGLCMPQNWVCDGENDCK 357
Query: 273 TDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE+ K CF+ C L CI C+ + DC+ D +DE +
Sbjct: 358 -----DFSDEEGCSKRKICFDSDFVC-LDGSCIYDELRCNGQKDCA-----DGSDELKCE 406
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C N+ +C +C++ S CDG+ DC +G DE
Sbjct: 407 LLE---VQCKENQFQCAYP-RCISQSYRCDGEDDCGDGSDE 443
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 21/152 (13%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL 82
+ D MD V+ TD D + + L +A+++ H L F V +
Sbjct: 726 YWSDVSMDVIRKVYVNGTDAD--DFIRWGLESPGGIAIDWIH---DLLFWTDSGTRRVEV 780
Query: 83 RC--AQINDLLNSWDLPAPEIFPL--------------DERLEKAGMHGENRSPLVTKNI 126
++ +L S DL P + + ++E+A M G R+ L+T NI
Sbjct: 781 ITLDTRVRHVLVSSDLDKPRAIAVHPHYGYVYWTDWGPNPKIERADMDGSKRTALITDNI 840
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
WP+ L IDY D +YW D+ +ES + G
Sbjct: 841 YWPNGLTIDYITDRIYWIDAKHRVIESASMRG 872
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G +R L++ ++ WP+ L ID+ + LYW D + +E +DG H +
Sbjct: 1128 KIERAGMDGSDRRDLISTSLTWPNGLAIDFEEKRLYWADGGTSKIEYSDLDGKHRTTI 1185
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+E+A M GE+R ++T+ + WP+ L ID D +YW D+ +ES + G V+
Sbjct: 1439 RIERADMDGEHREAVITEGLTWPNGLSIDLFADRIYWNDAKKKVIESSDLQGQDRKVIVE 1498
Query: 166 ---HPNEL 170
HP L
Sbjct: 1499 KVEHPYGL 1506
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ +A + G N+ ++ N++ P+ L +D+ LYW D+ N +E +DGS ++L +
Sbjct: 1042 ISRASIGGTNQQAIIHHNLESPAGLAMDWITKKLYWTDAGTNRIECSNLDGSMRSLLIY 1100
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
R+ +A + G NR +V+ ++ P+ L IDY LYW D+ + +E + G + L
Sbjct: 1744 RIGRANLDGSNRKSIVSTDLSLPNGLSIDYVARKLYWADALKDRIEMSDLHGRYRIALV 1802
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 71/170 (41%), Gaps = 23/170 (13%)
Query: 213 GMGKCIPESWKCDGFVDCLEDGSD----EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
G+G S V LED SD P+ C C + Q C + CI C+ E
Sbjct: 206 GLGMHGEASGDRKTLVQELEDESDGRIEAPSACGPICTSDQFLCISTCTCIARENRCNGE 265
Query: 269 MDCSTDDIVDNTDEDWDKFH---QCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
MDC DD N E ++ H C + V+C S KCI WLCD + DC D
Sbjct: 266 MDCENDDDELNC-EGYEGHHLNETCHGKRSVRCPNSGKCIAKEWLCDGDNDCG-----DF 319
Query: 325 TDEDWDKYFSH--NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE SH C + C + C+ + CDG+ DC + DE
Sbjct: 320 SDE------SHCGPQKNCTAEQFEC-RNGLCMPQNWVCDGENDCKDFSDE 362
>gi|410912696|ref|XP_003969825.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Takifugu rubripes]
Length = 1923
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/327 (33%), Positives = 159/327 (48%), Gaps = 35/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E RC + C+A +CDG DC +G DE A C+ +F C G+CI +
Sbjct: 166 CSDKEFRC-TDGSCIAEHWYCDGDTDCKDGSDEENCPSDVLAATCSVEEFQCAYGRCILD 224
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD D D SDE + HQ C + + C+ S CI W CD E DC D
Sbjct: 225 IYHCD-GDDDCGDWSDESDCSSHQPCRSVEFMCS-SGMCINAGWRCDGEFDCD-----DQ 277
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C Q +C + +CI +W CD E DCS D++DE+ + +
Sbjct: 278 SDEKNCTSSMCTADQFRCG-NGRCIRLSWRCDGEDDCS-----DHSDEEGCE--KTESPP 329
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-----CNNKADCE--NLKCSHKCS 392
C P++ +CG+ +C+ K C+ DC +G DE P +++ +C N CS KC
Sbjct: 330 CAPDQFQCGNG-RCIGQRKVCNEVNDCGDGTDEQPHHDCRPRSSEGNCNQNNGGCSQKCQ 388
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C C G + C D DEC +G C Q CTNT ++ C C +GY LRPD
Sbjct: 389 MARGLVQCTCHTGYRLMDDGKACQDVDECAEEGYCSQGCTNTEGAFQCWCVQGYELRPDK 448
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRI 477
+SC A+ EP ++F++ +DIR++
Sbjct: 449 RSCKALG---PEPV-LLFANRIDIRQV 471
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 76/168 (45%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
C N C S C+ CDG DC + DE C+P F C GKCI
Sbjct: 45 CGRNHFTCAVSAFGECTCIPAQWQCDGDNDCGDHSDEDGCMLPTCSPVDFHCDNGKCIRR 104
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW CDG DC ED SDE + +C + QC + CI W CD + DC DN+
Sbjct: 105 SWLCDGDNDC-EDDSDEQDCPPRECEEDEFQCQ-NGYCIRSLWHCDGDNDCG-----DNS 157
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE D +C + + +C CI +W CD + DC D +DE+
Sbjct: 158 DEQCD-MRKCSDKEFRCT-DGSCIAEHWYCDGDTDCK-----DGSDEE 198
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY+ LYW D+ + T+E DGS VL
Sbjct: 901 KIERAGMDASSRIVIISSNLTWPNGLAIDYDTKRLYWADAGMKTIEYGNFDGSGRRVL 958
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + RL R IN NS D P A FP
Sbjct: 1445 LKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTCRKVLIN---NSLDEPRAIAAFPSKG 1501
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E++ + G +R L+ ++ WP+ L +DY+ ++W D+HL+ +ES
Sbjct: 1502 FLFWTDWGHIAKIERSHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSD 1561
Query: 156 VDGSHNAVLCHP 167
++G +L P
Sbjct: 1562 LNGKLRQILVSP 1573
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ KA ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 508 DRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 567
Query: 166 HPN 168
N
Sbjct: 568 WQN 570
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++ M G +R L++ N+ WP+ L ID L W D+H +E+ ++G + L
Sbjct: 1209 KLERSAMDGSDRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERIEAADLNGQNRRTLVT 1268
Query: 167 P 167
P
Sbjct: 1269 P 1269
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E A M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 596 RIEYANMDGSNRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIEKADLDGRNRKAV 653
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 88 NDLLNSWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + WD I+ D + + +A +G + +V +++ P+ L ID+ LYW
Sbjct: 792 NAVALDWDAKDGYIYWTDVTTDSINRALWNGTQQEVVVDTSLESPAGLAIDWVTSKLYWT 851
Query: 145 DSHLNTVESVRVDGSHNAVLCHPN 168
D+ + +E DGS VL N
Sbjct: 852 DAGTDRIEVSNADGSMRTVLIWEN 875
>gi|114675441|ref|XP_001167447.1| PREDICTED: low-density lipoprotein receptor isoform 7 [Pan
troglodytes]
gi|410300406|gb|JAA28803.1| low density lipoprotein receptor [Pan troglodytes]
gi|410300408|gb|JAA28804.1| low density lipoprotein receptor [Pan troglodytes]
gi|410300410|gb|JAA28805.1| low density lipoprotein receptor [Pan troglodytes]
gi|410333799|gb|JAA35846.1| low density lipoprotein receptor [Pan troglodytes]
gi|410333801|gb|JAA35847.1| low density lipoprotein receptor [Pan troglodytes]
Length = 860
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++ F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTVLEDEKRLAHPFSL 611
>gi|114675445|ref|XP_001167232.1| PREDICTED: low-density lipoprotein receptor isoform 2 [Pan
troglodytes]
Length = 819
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 68 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 126
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 127 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 182
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 183 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 229
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 230 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 288
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 289 NDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 348
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 349 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 376
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 83/190 (43%), Gaps = 37/190 (19%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------PNTCIH---QCFNG 248
G C +F C GKCI W CDG +C +DGSDE P TC +C +G
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCSPKTCSQDEFRCHDG 78
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
KCI ++CD + DC +D +DE C QC S CIP W
Sbjct: 79 --------KCISRQFVCDSDRDC-----LDGSDEASCPVLTCGPASFQCN-SSTCIPQLW 124
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKY------FSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CD + DC D +DE W ++ F ++ C E C S +C+ S CDG
Sbjct: 125 ACDNDPDCE-----DGSDE-WPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDG 177
Query: 363 KPDCSNGEDE 372
PDC + DE
Sbjct: 178 GPDCKDKSDE 187
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 495 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 546
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 547 IDVNGGNRKTVLEDEKRLAHPFSL 570
>gi|307175679|gb|EFN65567.1| Very low-density lipoprotein receptor [Camponotus floridanus]
Length = 1019
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 117/389 (30%), Positives = 160/389 (41%), Gaps = 66/389 (16%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPF 200
+ CD + + + H + C P + C S N +CVAL+ CD PDCS+G DE
Sbjct: 220 WLCDHQADCTDGLDEKNCHRSKSCTPEQFTCHSGNGECVALTWMCDDNPDCSDGSDEAE- 278
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
CN C +F+C CI + W CD DC D SDE C CI
Sbjct: 279 CNDTCRSDEFTCANKHCIQQLWVCDNDNDC-GDNSDEKACEPTACHPNTDFACSEHYCIT 337
Query: 261 HNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
W CD + DC +D+I + ++ C + + C CI W+CD E DC
Sbjct: 338 SRWRCDGDYDCPDRSDEIGCKEPPNKERISHC-DKEFDCDDGVTCIHQTWVCDGEKDCP- 395
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----- 373
+ DE + HN V C P++ +C C++ +C+GK +C++ DE
Sbjct: 396 ----NGADESSQR--CHN-VTCRPDQFQCEDRRSCISGYLYCNGKAECADESDEKNCTSK 448
Query: 374 ---------------------PFCNNKADC------------------ENLKCSHKCSPT 394
CN K DC N CS C
Sbjct: 449 GISCDRRIQFECSEGSCISLEYVCNQKPDCIGWEDESADLCGVNECAKNNGGCSQICVDM 508
Query: 395 PRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGK 451
P G C C AG N+T C D DECL GSC Q C N S+ CSC GY P +
Sbjct: 509 PIGYRCDCHAGYRLIDNRT-CDDIDECLEPGSCSQFCQNEKGSFKCSCAAGYLKDPRNST 567
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C A + AS++F+ DIR++ L+
Sbjct: 568 RCKAA----EGHASLLFARRHDIRKVALD 592
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 103/253 (40%), Gaps = 43/253 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------------FC 201
V C + RC ++ +C+ +S CD DC++ DE P C
Sbjct: 59 VACPLRQFRC-ANGRCIPISWVCDKSDDCTDNSDESPEECKYTNCCLIISNSIEINQLIC 117
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
E P + + C + N +C + +C + +CIP
Sbjct: 118 VTETVPAKSRDIGRNSVSSQLACATIIPIGAVAHSSMNISDAQECKDSDFKCT-NGRCIP 176
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+ W CD + DC D DED + C + QC+ +CIP WLCD + DC+
Sbjct: 177 NIWHCDGDRDCP-----DGVDEDPAVCRAIPCSETEFQCS-PGECIPKTWLCDHQADCT- 229
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCN 377
+ D+ H + C P + C S N +CVAL+ CD PDCS+G DE CN
Sbjct: 230 --------DGLDEKNCHRSKSCTPEQFTCHSGNGECVALTWMCDDNPDCSDGSDEAE-CN 280
Query: 378 NKADCENLKCSHK 390
+ + C++K
Sbjct: 281 DTCRSDEFTCANK 293
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 21/172 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHN 262
EC F C G+CIP W CDG DC + ++P C C + QC+ +CIP
Sbjct: 161 ECKDSDFKCTNGRCIPNIWHCDGDRDCPDGVDEDPAVCRAIPCSETEFQCS-PGECIPKT 219
Query: 263 WLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDD 320
WLCD + DC+ D DE + + C Q C + + +C+ W+CD+ DCS
Sbjct: 220 WLCDHQADCT-----DGLDEKNCHRSKSCTPEQFTCHSGNGECVALTWMCDDNPDCS--- 271
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + C +E C ++ C+ CD DC + DE
Sbjct: 272 --DGSDE------AECNDTCRSDEFTC-ANKHCIQQLWVCDNDNDCGDNSDE 314
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAV 163
+ R+E+AGM G +RS +V +++WP+ L +D +YW D+ LN + S DG+ V
Sbjct: 713 EARIERAGMDGTHRSVIVGNDVKWPNGLTLDLIGKRVYWVDAKLNIIGSCNYDGTGRRTV 772
Query: 164 LCHPNELR 171
L P+ LR
Sbjct: 773 LYSPSNLR 780
>gi|326327826|pdb|3M0C|C Chain C, The X-Ray Crystal Structure Of Pcsk9 In Complex With The
Ldl Receptor
Length = 791
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 106 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 164
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 165 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 220
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 221 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 267
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 268 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 326
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 327 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 386
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 387 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 414
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 105/225 (46%), Gaps = 26/225 (11%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG-- 213
G+ C NE +C +C++ CDG +C +G DE + C G FSCG
Sbjct: 17 GTAVGDRCERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGR 75
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+ +CIP+ W+CDG VDC ++GSDE C + +C KCI ++CD + DC
Sbjct: 76 VNRCIPQFWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-- 131
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-- 331
+D +DE C QC S CIP W CD + DC D +DE W +
Sbjct: 132 ---LDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRC 181
Query: 332 ----YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F ++ C E C S +C+ S CDG PDC + DE
Sbjct: 182 RGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 225
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 17 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 75
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 76 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 129
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 130 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 178
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 533 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 584
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 585 IDVNGGNRKTILEDEKRLAHPFSL 608
>gi|195132737|ref|XP_002010799.1| GI21507 [Drosophila mojavensis]
gi|193907587|gb|EDW06454.1| GI21507 [Drosophila mojavensis]
Length = 1968
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 118/383 (30%), Positives = 163/383 (42%), Gaps = 85/383 (22%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPES 221
LCH ++ C + +CV + CDG DC + DE C A C G F C G CI S
Sbjct: 1101 LCHAHQHAC-DNGKCVDYTLVCDGNNDCGDNSDE-LRCKEAASCEHGMFQCSSGSCIASS 1158
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI-V 277
W+CDG +DC D SDE + C QC +C L +C+ +CD DC +D++
Sbjct: 1159 WECDGRIDC-SDASDEHDKCGQRQCPEKMHRCLLG-QCLDARLVCDGHNDCGDQSDELNC 1216
Query: 278 DNTDEDWDK-------------FHQCF-------------NGQVQCAL------------ 299
D D +QC NG +C
Sbjct: 1217 DRRSSDGAAAAANISCGTLATPMYQCSSNLKLCLDMAARCNGTAECPRGEDEADCGELCS 1276
Query: 300 --------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN-----------AVL 339
SK CI + CD+E DC+ D +DE+ +++ H
Sbjct: 1277 IYEFQCRDSKHCIRQEFRCDKERDCA-----DGSDEEHCEQHTLHGNGTSMSASASARRA 1331
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C P+ C +CV +S+ C+G DC+NG DEGP C + C C HKC TP GA+
Sbjct: 1332 CKPHLFDC-HDGECVDMSRVCNGFDDCTNGNDEGPQCGSA--CMRPLCQHKCQATPAGAV 1388
Query: 400 CFCPAGQNPNKTQ--CVDADECLIDGS---CDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C C G Q CVD DEC + C Q C NT SY C C + LR D SC
Sbjct: 1389 CTCLEGYRLQSDQRSCVDIDECAVSPEQQPCAQLCENTPGSYQCQCHADFMLRQDRSSCK 1448
Query: 455 AVNVPQDEPASIIFSSTVDIRRI 477
++ A+++F+S ++R +
Sbjct: 1449 SIQ----SGATLLFTSYNEVRNL 1467
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 146/324 (45%), Gaps = 39/324 (12%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC++ DE C P F C G C+ C+G +C G
Sbjct: 82 CILQAKMCDGRSDCTDNTDELECDYKLCRQPHWFPCAQPHGACLAAELICNGVDNC--PG 139
Query: 235 SDEPNTCIHQCFN--GQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
++ C H+ G C+ + C+P +++CD + DC D D T
Sbjct: 140 GEDELHCPHRMLTSFGHRNCSQYEYMCQDHSCLPLDFMCDGKEDCP--DGSDETAGCKQS 197
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVLCHPN-- 343
C G + CA + WLCD DC D D D ED LC P+
Sbjct: 198 ATSCTTGHL-CANGRCLQRKQWLCDGVDDCG--DGSDEKDCED----------LCQPSMG 244
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC--SHKCSPTP-RGAMC 400
+ C + C++L++ CDG+P+CS+G DE C+ K +C + +C C P G C
Sbjct: 245 KFMCRNHGSCLSLAQVCDGQPNCSDGSDESESCHVKPNCTSKQCPPGATCHMMPTSGPEC 304
Query: 401 FCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTL-RPDGKSCTAV 456
+CP G K +C D +EC C Q C NT Y C+C GY L + ++C A
Sbjct: 305 YCPKGFRLLKFKDKCEDINECQEQQDLCSQRCENTSGGYRCTCDAGYELDATNNRTCHAT 364
Query: 457 NVPQDEPASIIFSST-VDIRRIHL 479
++ ++ + ++ +T + + +HL
Sbjct: 365 SIGGEKQSPLLLYTTQMTVMGMHL 388
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 98/222 (44%), Gaps = 43/222 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMGK-CIPESW 222
E RC SS +C+ ++ C+G DC++G DE +C +F+C GK C+ ++
Sbjct: 1017 EFRCRSSGECLTMAHRCNGHQDCADGSDESDCDGIKRVKVKCDLSEFACHDGKRCLAKNK 1076
Query: 223 KCDGFVDCLEDGSDEP-----------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CDG DC D SDE + H C NG KC+ + +CD DC
Sbjct: 1077 RCDGHKDC-NDSSDELHCAQFDRTKLCHAHQHACDNG--------KCVDYTLVCDGNNDC 1127
Query: 272 STDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DN+DE + C +G QC+ S CI +W CD +DCS D D D+
Sbjct: 1128 G-----DNSDELRCKEAASCEHGMFQCS-SGSCIASSWECDGRIDCS--DASDEHDKCGQ 1179
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C RC QC+ CDG DC + DE
Sbjct: 1180 RQ-------CPEKMHRC-LLGQCLDARLVCDGHNDCGDQSDE 1213
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 106/244 (43%), Gaps = 46/244 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAE-CTPGQFSCGMGKCI 218
V C +E C +C+A +K CDG DC++ DE F + C Q +C GKC+
Sbjct: 1056 VKCDLSEFACHDGKRCLAKNKRCDGHKDCNDSSDELHCAQFDRTKLCHAHQHACDNGKCV 1115
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ CDG DC ++ + C +G QC+ S CI +W CD +DCS D D
Sbjct: 1116 DYTLVCDGNNDCGDNSDELRCKEAASCEHGMFQCS-SGSCIASSWECDGRIDCS--DASD 1172
Query: 279 NTDEDW-----DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKY 332
D+ +K H+C GQ C+ +CD DC D +DE + D+
Sbjct: 1173 EHDKCGQRQCPEKMHRCLLGQ--------CLDARLVCDGHNDCG-----DQSDELNCDRR 1219
Query: 333 FSHNAVLCHPNELRCG---------SSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
S A + CG SSN C+ ++ C+G +C GEDE AD
Sbjct: 1220 SSDGAAA--AANISCGTLATPMYQCSSNLKLCLDMAARCNGTAECPRGEDE-------AD 1270
Query: 382 CENL 385
C L
Sbjct: 1271 CGEL 1274
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G + P+V+ NI WP+ + +D +Q+ +YW D+ L +++SV DGS +
Sbjct: 517 IARASMDGAHSKPIVSDNIHWPNGIALDMHQERIYWVDAKLGSIQSVHPDGSSRQTVLDG 576
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 577 MLKHPYGL 584
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 12/151 (7%)
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF--HQCFNG 293
D N + + + +C S +C+ C+ DC+ D D +D D K +C
Sbjct: 1004 DASNRSCTEALDCEFRCRSSGECLTMAHRCNGHQDCA--DGSDESDCDGIKRVKVKCDLS 1061
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
+ C K+C+ N CD DC+ D++DE F LCH ++ C + +C
Sbjct: 1062 EFACHDGKRCLAKNKRCDGHKDCN-----DSSDELHCAQFDRTK-LCHAHQHAC-DNGKC 1114
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
V + CDG DC + DE C A CE+
Sbjct: 1115 VDYTLVCDGNNDCGDNSDE-LRCKEAASCEH 1144
>gi|410219638|gb|JAA07038.1| low density lipoprotein receptor [Pan troglodytes]
Length = 858
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 LNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++ F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTVLEDEKRLAHPFSL 611
>gi|28373937|pdb|1N7D|A Chain A, Extracellular Domain Of The Ldl Receptor
Length = 699
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 88 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 146
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 147 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 202
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 203 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 249
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 250 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 308
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 309 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 368
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 369 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 396
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 6 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 64
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 65 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 117
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 118 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 170
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 171 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 207
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 5 RCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 63
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI ++CD + DC
Sbjct: 64 QFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC---- 113
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 114 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 160
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L Q ++ + W
Sbjct: 456 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDW 515
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S+
Sbjct: 516 GTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSI 567
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G + L HP L
Sbjct: 568 DVNGGNRKTILEDEKRLAHPFSL 590
>gi|62088398|dbj|BAD92646.1| low density lipoprotein receptor precursor variant [Homo sapiens]
Length = 870
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 121 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 179
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 180 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 235
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 236 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 282
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 283 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 341
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 342 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 401
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 402 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 429
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 39 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 97
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 98 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 150
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 151 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 203
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 204 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 240
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 32 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 90
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 91 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 144
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 145 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 193
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 548 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 599
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 600 IDVNGGNRKTILEDEKRLAHPFSL 623
>gi|410950508|ref|XP_003981947.1| PREDICTED: low-density lipoprotein receptor [Felis catus]
Length = 866
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 151/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++L CD DC +G DE C+P F C CIPE W C
Sbjct: 109 CAQDEFRC-QDGKCISLEFVCDSDRDCLDGSDEASCPMPTCSPAHFQCNNSACIPELWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ-----------CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC +DGSDE P C + C + C S +CI +W CD DC
Sbjct: 168 DGDPDC-KDGSDEWPQRCGGRNMSAPQGDDNPCSALEFHCH-SGECIHSSWRCDGGPDCK 225
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 226 -----DKSDEENCAVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----L 270
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
N LC PN+ +C S +C+ L K C+ DC + DE +C + + CSH
Sbjct: 271 GCINVTLCEGPNKFKC-HSGECITLDKVCNSVRDCRDWSDEPLKECETDECLDNRGGCSH 329
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q ++ +C D DEC C Q C N SY C C G+ L P
Sbjct: 330 ICNDLKIGYECLCPEGFQLVDQRRCEDIDECQDPDVCSQLCVNLEGSYKCECEAGFQLDP 389
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 LTKACKAVGT----IAYLFFTNRHEVRKMTLDRS 419
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 145/367 (39%), Gaps = 87/367 (23%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG-- 213
G+ A C NE +C +C++ CDG +C + DE + C PG FSCG
Sbjct: 20 GTAVADKCGRNEFQC-QDGKCISYKWVCDGSAECLDASDESQETCMSVTCKPGDFSCGGR 78
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+ +CIPE W+CDG VDC E+GSDE C + +C KCI ++CD + DC
Sbjct: 79 VNRCIPEFWRCDGQVDC-ENGSDEQGCLPKTCAQDEFRCQ-DGKCISLEFVCDSDRDC-- 134
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+D +DE C QC S CIP W CD + DC D +DE +
Sbjct: 135 ---LDGSDEASCPMPTCSPAHFQCNNS-ACIPELWACDGDPDCK-----DGSDEWPQRCG 185
Query: 334 SHNAVL-------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------- 372
N C E C S +C+ S CDG PDC + DE
Sbjct: 186 GRNMSAPQGDDNPCSALEFHC-HSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQ 244
Query: 373 ---------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQC---------- 413
C+ + DC+++ C +C + PNK +C
Sbjct: 245 CSDGTCIHGSRQCDREYDCKDMSDELGCINV---TLC-----EGPNKFKCHSGECITLDK 296
Query: 414 ------------------VDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
+ DECL + G C C + + Y C C EG+ L D + C
Sbjct: 297 VCNSVRDCRDWSDEPLKECETDECLDNRGGCSHICNDLKIGYECLCPEGFQLV-DQRRCE 355
Query: 455 AVNVPQD 461
++ QD
Sbjct: 356 DIDECQD 362
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + W
Sbjct: 479 DGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTLFKEKGSKPRAIVVDPVHGFMYWTDW 538
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA ++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+
Sbjct: 539 GTPA--------EIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSI 590
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G + L HP L
Sbjct: 591 DVNGGNRKTVLEDEKKLAHPFSL 613
>gi|307195306|gb|EFN77254.1| Very low-density lipoprotein receptor [Harpegnathos saltator]
Length = 903
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/386 (29%), Positives = 156/386 (40%), Gaps = 62/386 (16%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPF 200
+ CD ++ V H C P + C S N +CVAL+ CD PDCS+G DE
Sbjct: 107 WLCDRQVDCTNGVDEKNCHRTKTCTPEQFTCHSGNGECVALTWMCDDNPDCSDGSDEAE- 165
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
CN C +F+C CI + W CD DC D SDE C CI
Sbjct: 166 CNDTCRSDEFTCANKHCIQQLWVCDHDNDC-GDNSDEKACGPVTCHPDTDFACSESYCIT 224
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD + DC E +K C N + C CI W+CD E DC
Sbjct: 225 SRWRCDGDYDCPDRSDEMGCKEPSEKISHC-NKEFDCNDGVTCIHQTWVCDGEKDCP--- 280
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------- 373
+ DE + HN + C P++ +C + C++ +C+GK +C++G DE
Sbjct: 281 --NGADESPQR--CHN-ITCRPDQFQCEDRHSCISGHLYCNGKTECADGSDEKNCTSKVV 335
Query: 374 -------------------PFCNNKADC------------------ENLKCSHKCSPTPR 396
C+ DC N CS C P
Sbjct: 336 SCDPQVQFECSEGSCIPLEHVCDKNPDCIGWEDESIQYCGVNECAKNNGGCSQICVDLPI 395
Query: 397 GAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G C C AG N+T C D +ECL GSC Q C N S+ CSC GY P ++ T
Sbjct: 396 GYRCDCNAGYRLIDNRT-CDDINECLEPGSCSQFCKNEKGSFKCSCAAGYLKDP--RNLT 452
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLN 480
+ AS++F+ DIR++ L+
Sbjct: 453 RCKAAEGH-ASLLFARRHDIRKVALD 477
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 120/261 (45%), Gaps = 37/261 (14%)
Query: 148 LNTVESVRVDGSHNAVL----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-- 201
+ T + VD H + C +E +C ++ +C+ CDG DC +G DE P
Sbjct: 28 MTTFVTGAVDHPHMNISDTQECKESEFKC-TNGRCIPNIWHCDGDRDCPDGVDEDPAVCR 86
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQC-ALSKKCI 259
C+ +F C G+CIP++W CD VDC +G DE N C Q C + + +C+
Sbjct: 87 TVPCSETEFQCSPGECIPKTWLCDRQVDCT-NGVDEKNCHRTKTCTPEQFTCHSGNGECV 145
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
W+CD+ DCS D +DE + C + + CA +K CI W+CD + DC
Sbjct: 146 ALTWMCDDNPDCS-----DGSDEA-ECNDTCRSDEFTCA-NKHCIQQLWVCDHDNDCG-- 196
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------ 373
DN+DE + V CHP+ S + C+ CDG DC + DE
Sbjct: 197 ---DNSDEK-----ACGPVTCHPDTDFACSESYCITSRWRCDGDYDCPDRSDEMGCKEPS 248
Query: 374 ---PFCNNKADC-ENLKCSHK 390
CN + DC + + C H+
Sbjct: 249 EKISHCNKEFDCNDGVTCIHQ 269
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAV 163
+ R+E+AGM G +RS +V +++WP+ L +D +YW D+ LN + S DG+ V
Sbjct: 598 EARIERAGMDGSHRSVIVGNDVKWPNGLALDLIGKRVYWVDAKLNIIGSCNYDGTGRRTV 657
Query: 164 LCHPNELR 171
L P+ LR
Sbjct: 658 LYSPDNLR 665
>gi|17298316|gb|AAL38108.1| candidate tumor suppressor protein [Homo sapiens]
Length = 1731
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 161/365 (44%), Gaps = 64/365 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTP-GQFSCGMGKCIPESW 222
C ++ CG+ +C+ + CD + DC + DE C C P QF C G+CI W
Sbjct: 3 CQVDQFSCGNG-RCIPRAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKW 61
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDN 279
CD DC + + C+H CF+ Q +C+ S +CIP +W CD + DC S + ++
Sbjct: 62 HCDSDDDCGDGSDEV--GCVHSCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINC 118
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
T E+ C + QC C+P W CD E DC D +DE K + L
Sbjct: 119 TKEEIHSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCE-----DGSDE---KGCNGTIRL 170
Query: 340 C-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GP---------------- 374
C H + C S+ +C+ + CDG DC + DE GP
Sbjct: 171 CDHKTKFSCWSTGRCINKAWVCDGDIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPE 230
Query: 375 -FCNNKADC---------------ENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVD 415
CN K DC N CS+ CS P RG +C CP G NK C
Sbjct: 231 KLCNGKKDCPDGSDEGYLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEI 290
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
D C C Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IR
Sbjct: 291 VDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDSFE---AFIIFSIRHEIR 347
Query: 476 RIHLN 480
RI L+
Sbjct: 348 RIDLH 352
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 1591 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 1650
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
DC DN+DE K C + +CA CIP + C++ +DC+
Sbjct: 1651 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCA 1693
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 1420 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 1479
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 1480 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 1539
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFN----GQVQCALSKK 257
+ C + C +G V+C G E N C+ + + + +C + +
Sbjct: 1540 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNAYSEFECG-NGE 1598
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 1599 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 1652
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 1653 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 1698
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 1699 ----KNCNNTDCTH 1708
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 124 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDE-KGCNGTIRLCDHKTKFSCWST 182
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 183 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDC 239
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1097 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 1156
Query: 166 HPN 168
N
Sbjct: 1157 GSN 1159
>gi|74136375|ref|NP_001028078.1| low-density lipoprotein receptor precursor [Macaca mulatta]
gi|40231914|gb|AAR83313.1| low density lipoprotein receptor [Macaca mulatta]
Length = 853
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/360 (32%), Positives = 158/360 (43%), Gaps = 53/360 (14%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE C+ +F C GKCI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGEVDCENGSDEQDCPPKTCSQDEFRCHDGKCIYR 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CD DCL DGSDE + + C QC S CIP W CD + DC D +
Sbjct: 125 QFVCDSDRDCL-DGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGS 177
Query: 281 DEDWDKFHQ-----------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN----- 324
DE W + Q C + C S +CI W CD DC +N
Sbjct: 178 DE-WPQHCQGLEVPKRDSSPCSAFEFHCR-SGECIHSGWRCDGGPDCKDKSDEENCPEFQ 235
Query: 325 ------------TDEDWD-KYFSH-----NAVLCH-PNELRCGSSNQCVALSKFCDGKPD 365
D ++D K S N LC PN+ +C S +C++L K C+ D
Sbjct: 236 CSDGTCIHGSRQCDREYDCKDMSDEVGCINVTLCEGPNKFKC-HSGECISLDKVCNMARD 294
Query: 366 CSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLID 422
C + DE +C N CSH C+ G C CP G Q + +C D DEC
Sbjct: 295 CRDWSDEPIKECGTNECLDNNGGCSHICNDLKIGYECLCPDGFQLVAQRRCEDIDECQDP 354
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C Q C N SY C C EG+ L P K+C AV A +IF++ ++R++ L+ S
Sbjct: 355 DTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG----SIAYLIFTNRHEVRKMTLDRS 410
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 136/332 (40%), Gaps = 69/332 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-EDGKCISYKWVCDGTAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE + C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGEVDC-ENGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCQGLEVPK 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------GPFCNN 378
++ C E C S +C+ CDG PDC + DE C+
Sbjct: 192 RDSSPCSAFEFHC-RSGECIHSGWRCDGGPDCKDKSDEENCPEFQCSDGTCIHGSRQCDR 250
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD--------------------- 417
+ DC+++ C +C P + +C+ D
Sbjct: 251 EYDCKDMSDEVGCINV---TLCEGPNKFKCHSGECISLDKVCNMARDCRDWSDEPIKECG 307
Query: 418 --ECL-IDGSCDQTCTNTHLSYVCSCTEGYTL 446
ECL +G C C + + Y C C +G+ L
Sbjct: 308 TNECLDNNGGCSHICNDLKIGYECLCPDGFQL 339
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 26 RCERNEFQCEDGKCISYKWVCDGTAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E+DC + +DE C + +C KCI ++CD + DC
Sbjct: 85 QFWRCDGEVDCE-----NGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NI+WP+ + +D+ LYW DS L+++ S
Sbjct: 529 WGTPA--------KIKKGGLNGVDIYSLVTENIEWPNGITLDFPSGRLYWVDSKLHSISS 580
Query: 154 VRVDGSHNAVLCHPNE 169
+ V+G + + E
Sbjct: 581 IDVNGGNRKTILEDKE 596
>gi|383409945|gb|AFH28186.1| low-density lipoprotein receptor isoform 1 precursor [Macaca
mulatta]
Length = 860
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 146/332 (43%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCIYRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + C S +CI W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCQGLEVPKRDSSPCSAFEFHCR-SGECIHSGWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCPVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C++L K C+ DC + DE +C N CSH C
Sbjct: 271 INVTLCEGPNKFKC-HSGECISLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHIC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A +IF++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLIFTNRHEVRKMTLDRS 417
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-EDGKCISYKWVCDGTAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE + C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGEVDC-ENGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCQGLEVPK 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ CDG PDC + DE
Sbjct: 192 RDSSPCSAFEFHC-RSGECIHSGWRCDGGPDCKDKSDE 228
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 26 RCERNEFQCEDGKCISYKWVCDGTAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E+DC + +DE C + +C KCI ++CD + DC
Sbjct: 85 QFWRCDGEVDCE-----NGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NI+WP+ + +D+ LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIEWPNGITLDFPSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAVLCHPNE 169
+ V+G + + E
Sbjct: 588 IDVNGGNRKTVLEDKE 603
>gi|189239732|ref|XP_968903.2| PREDICTED: similar to vitellogenin receptor [Tribolium castaneum]
Length = 1306
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/363 (31%), Positives = 157/363 (43%), Gaps = 61/363 (16%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
S +A C P C S QC+ CDG DC EDE + C +F C G CI
Sbjct: 567 SIDAKKCPPGHFMC-KSGQCINERLVCDGVKDCLEEEDEANCVSTVCKDYEFRCQSGACI 625
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
P++W+CD DC D SDE + C C C + KCI +++CD+E DCS D
Sbjct: 626 PKNWECDHDYDC-PDFSDEHSGCA-SCDASTFTCN-NGKCIDKSFVCDKENDCS-----D 677
Query: 279 NTDE---------DWDKF------HQCF------NGQVQCALSK---------------- 301
N+DE D +F H C NG +C +
Sbjct: 678 NSDELSCVMENSCDLSEFSCSLHTHICLPDSARCNGTSECPHHEDEQNCSNCQVDEFSCN 737
Query: 302 --KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
KCIP W+CD DC +D++ + ++ ++ + + + RC + N C+ S
Sbjct: 738 NTKCIPREWICDHSDDCGDGSDEVPSLCNHTIPEHATNFSCI---DRFRCRNGN-CIDFS 793
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVD 415
C+ +P+C +G DE CN N CS C TP G C C G + C D
Sbjct: 794 LVCNKEPNCYDGSDEEGLCNTSCSALNNPCSQICVKTPTGPTCKCQGGYQLRGDGHTCED 853
Query: 416 ADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
+EC C Q C N+ SY C C EG+ LR D SC A + S+IFSS I
Sbjct: 854 INECAEHPPVCSQICHNSEGSYSCDCYEGFALRTDRTSCKA----KGTAMSLIFSSNNQI 909
Query: 475 RRI 477
R I
Sbjct: 910 REI 912
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G N S ++ +I WP+ L IDY LYW D+ L T+ES+R+DG+ N
Sbjct: 12 IARALMDGTNGSSFISSDIHWPNGLTIDYPNSRLYWTDAKLMTLESIRLDGTDRRIVLNE 71
Query: 163 VLCHPNEL 170
++ HP +
Sbjct: 72 IVKHPYAI 79
>gi|359322232|ref|XP_003432899.2| PREDICTED: low-density lipoprotein receptor [Canis lupus
familiaris]
Length = 847
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/332 (34%), Positives = 151/332 (45%), Gaps = 39/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 93 CAPDEFRC-QDGKCIAPEFVCDSDQDCLDGSDEVSCHIPTCGPLHFQCNNSACIPELWAC 151
Query: 225 DGFVDCLEDGSDE-------PNTCIHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC +DGSDE NT Q C + C S +CI +W CD DC
Sbjct: 152 DGDPDC-KDGSDEWPQHCGGRNTSAPQGDDNPCSALEFHCQ-SGECIHSSWRCDGGPDCK 209
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD+E DC D +DE
Sbjct: 210 -----DKSDEENCAVPTCRPDEFQCS-DGTCIHGSRQCDKEYDCK-----DMSDE----I 254
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
N LC PN+ +C S +C+ L K C+ DC + DE +C + K CSH
Sbjct: 255 GCINVTLCEGPNKFKC-HSGECITLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 313
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q ++ +C D DEC C Q C N SY C C EG+ L P
Sbjct: 314 ICNDLKVGHECLCPEGFQLVDQRRCEDIDECQDPDVCSQLCVNLEGSYKCECEEGFQLDP 373
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
K+C AV A + F++ ++R++ L+
Sbjct: 374 HTKACKAVG----NIAYLFFTNRHEVRKMTLD 401
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG+ +C + DE + C G F+CG + +CIP+
Sbjct: 11 CGRNEFQC-QDGKCISYKWVCDGRAECLDASDESQETCMSVTCKSGDFNCGGRVNRCIPQ 69
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG +DC E+GSDE C + +C KCI ++CD + DC +D +
Sbjct: 70 FWRCDGQMDC-ENGSDEQGCPPKTCAPDEFRCQ-DGKCIAPEFVCDSDQDC-----LDGS 122
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL- 339
DE C QC S CIP W CD + DC D +DE W ++
Sbjct: 123 DEVSCHIPTCGPLHFQCNNS-ACIPELWACDGDPDCK-----DGSDE-WPQHCGGRNTSA 175
Query: 340 -------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E C S +C+ S CDG PDC + DE
Sbjct: 176 PQGDDNPCSALEFHC-QSGECIHSSWRCDGGPDCKDKSDE 214
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQC-ALSKKCIPH 261
+C +F C GKCI W CDG +CL+ + TC+ C +G C +CIP
Sbjct: 10 KCGRNEFQCQDGKCISYKWVCDGRAECLDASDESQETCMSVTCKSGDFNCGGRVNRCIPQ 69
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD +MDC + +DE C + +C KCI ++CD + DC
Sbjct: 70 FWRCDGQMDCE-----NGSDEQGCPPKTCAPDEFRCQ-DGKCIAPEFVCDSDQDC----- 118
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C +S C+ CDG PDC +G DE P
Sbjct: 119 LDGSDE-----VSCHIPTCGPLHFQCNNS-ACIPELWACDGDPDCKDGSDEWP 165
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A + ++L + ++ + +W PA
Sbjct: 475 YWTDSILGTVSVADTKGAKRKTLFKEKGSKPRAIVVDPVHGFMYWTNWGTPA-------- 526
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 527 EIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTILE 586
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 587 DKKKLAHPFSL 597
>gi|62822140|gb|AAY14689.1| unknown [Homo sapiens]
Length = 862
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 161/365 (44%), Gaps = 64/365 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTP-GQFSCGMGKCIPESW 222
C ++ CG+ +C+ + CD + DC + DE C C P QF C G+CI W
Sbjct: 3 CQVDQFSCGNG-RCIPRAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKW 61
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDN 279
CD DC + + C+H CF+ Q +C+ S +CIP +W CD + DC S + ++
Sbjct: 62 HCDSDDDCGDGSDEV--GCVHSCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINC 118
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
T E+ C + QC C+P W CD E DC D +DE K + L
Sbjct: 119 TKEEIHSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCE-----DGSDE---KGCNGTIRL 170
Query: 340 C-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GP---------------- 374
C H + C S+ +C+ + CDG DC + DE GP
Sbjct: 171 CDHKTKFSCWSTGRCINKAWVCDGDIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPE 230
Query: 375 -FCNNKADC---------------ENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVD 415
CN K DC N CS+ CS P RG +C CP G NK C
Sbjct: 231 KLCNGKKDCPDGSDEGYLCDECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEI 290
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
D C C Q C + CSC EG+ L DG+SCT+V+ + A IIFS +IR
Sbjct: 291 VDYCSNHLKCSQVCEQHKHTVKCSCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIR 347
Query: 476 RIHLN 480
RI L+
Sbjct: 348 RIDLH 352
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 124 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDEKG-CNGTIRLCDHKTKFSCWST 182
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 183 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDC 239
>gi|328783152|ref|XP_001121707.2| PREDICTED: vitellogenin receptor [Apis mellifera]
Length = 1671
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/371 (31%), Positives = 159/371 (42%), Gaps = 80/371 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE +C C++ C+G DC++ DE +C F+C +G CIP++WKC
Sbjct: 898 CDSNEFQC-HEGACISKYLVCNGYNDCTDLSDELNCNKHKCDNDSFACEIGTCIPKTWKC 956
Query: 225 DGFVDCLEDGSDEPNTC--------IHQCFNG---------------------------- 248
DG VDC DGSDE C + CFNG
Sbjct: 957 DGEVDC-PDGSDESEICQRKKCSSEMFTCFNGRCIDLILKCNGISECEDDSDEKYCNDKN 1015
Query: 249 ----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
+ +C S CIP + CD +C +D D +C + C
Sbjct: 1016 RNNNINCTADEYKCFDSDLCIPKRFRCDGIKNCPKND-------DERDCARCNEAEYVCE 1068
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+KKCI +W+CD DC N D +W + +++ + E +C S+ C+ S
Sbjct: 1069 -NKKCIEKSWVCDRIDDCGDGSDERNCDGSNWK--MNSISMVSNCKEFKC-SNGICLPFS 1124
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE-----NLKCSHKCSPTPRGAMCFCPAG---QNPN 409
K CDGK DCS+ DE DCE N C++ C TP G +C C G N
Sbjct: 1125 KVCDGKIDCSDQSDEF------GDCEISCTKNNPCTNMCHKTPTGPVCSCRNGYHLSNDL 1178
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
KT C D DEC C Q C NT+ S++CSC EGY +R D SC + II
Sbjct: 1179 KT-CEDIDECK-QNICSQICHNTNGSFICSCYEGYVIRSDKTSCKVAGSQME----IIIV 1232
Query: 470 STVDIRRIHLN 480
S IR++ N
Sbjct: 1233 SDTHIRKLSSN 1243
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 85/183 (46%), Gaps = 14/183 (7%)
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-CVALSKFCD 361
CI + W+CD DC D +DE+ + + C+ R NQ C+ L+ C+
Sbjct: 42 CIRNEWVCDGVPDCP-----DKSDEEKCENNIVSIEKCNNEHDRYLCKNQRCIFLNATCN 96
Query: 362 GKPDCSNGEDEGPFCNNKADCE---NLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDAD 417
K DC + DE KAD KC H C TP+GA C C +G N C D +
Sbjct: 97 EKNDCGDNSDEDLDACKKADASCKLTAKCEHNCRKTPKGAQCSCRSGYKLTNNQTCTDIN 156
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC G CDQ C N SY C C GY ++ D K+C A A+++FS +I
Sbjct: 157 ECDNYGICDQQCINNAGSYSCLCQPGYIMQDDKKTCKA----DGGEATMVFSIKSEIHGY 212
Query: 478 HLN 480
+L+
Sbjct: 213 YLD 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 96 LPAPEIF-----PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
LP+ IF ++ + AGM G+N + LV ++++WP+SL IDY + LYW D+
Sbjct: 321 LPSNGIFYWTEWGMNSSILMAGMDGKNITVLVNQDLEWPNSLSIDYPNNRLYWIDTKQKV 380
Query: 151 VESVRVDGSHNAVL 164
+ES+++DG+ ++
Sbjct: 381 IESIKLDGTDRRIV 394
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
+D P +I+ ++ G N + +V ++ +L IDY + LYW D+H +ES
Sbjct: 1366 YDRPMSKIY-------RSNTMGNNATAIVHLDLGLVLALTIDYTRSKLYWSDTHFKNIES 1418
Query: 154 VRVDGSHNAVL 164
+DGS+ AV+
Sbjct: 1419 SNLDGSNRAVV 1429
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCA-LSKKCIPHNW 263
F C CI W CDG DC D SDE I +C N + +++CI N
Sbjct: 35 FRCKDSHCIRNEWVCDGVPDC-PDKSDEEKCENNIVSIEKCNNEHDRYLCKNQRCIFLNA 93
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C+E+ DC DN+DED D C C L+ KC
Sbjct: 94 TCNEKNDCG-----DNSDEDLD---ACKKADASCKLTAKC 125
>gi|351697368|gb|EHB00287.1| Low-density lipoprotein receptor-related protein 4 [Heterocephalus
glaber]
Length = 1939
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/331 (33%), Positives = 156/331 (47%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 182 CSDKEFRC-SDGSCIAEHWYCDGDADCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 236
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 237 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 291
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 292 --DQSDERNCTTSMCTTEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 341
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCEN-----LKCS 388
+ C ++ C S+ +C+ K C+G DC +G DE P C + EN C+
Sbjct: 342 GSPQCASDQFLC-SNGRCIGQRKLCNGLNDCGDGSDESPQQHCRPRTGEENCNVNNGGCA 400
Query: 389 HKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 401 QKCQMVRGAVQCTCHTGYRLTEDGRACQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 460
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 461 RPDRRSCKALG---PEPV-LLFANRIDIRQV 487
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 78 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 136
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 137 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 189
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 190 S-DGSCIAEHWYCDGDADCK-----DGSDEE 214
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS+ VL
Sbjct: 917 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSNRKVL 974
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1454 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1510
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1511 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1570
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1571 DRIESADLNGKLRQVLVSHVSHPFAL 1596
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G R+ L+ N+ WP+ L +D L W D+H +E+ ++G L
Sbjct: 1223 NAKLERASMDGSERTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGGSRHTL 1282
Query: 165 CHP 167
P
Sbjct: 1283 VSP 1285
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 524 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 583
Query: 166 HPN 168
N
Sbjct: 584 WQN 586
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGS +
Sbjct: 612 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSRRKAV 669
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1443 IRRANLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1499
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVLC 165
R+E + G R LV +N+ P ++V+ + ++YW D N +E +DGS VL
Sbjct: 1181 RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGLMYWTDWGENAKLERASMDGSERTVLI 1240
Query: 166 HPN 168
+ N
Sbjct: 1241 NNN 1243
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 831 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 890
Query: 168 N 168
N
Sbjct: 891 N 891
>gi|94470463|gb|ABF20542.1| lipophorin receptor [Galleria mellonella]
Length = 914
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/385 (30%), Positives = 156/385 (40%), Gaps = 91/385 (23%)
Query: 158 GSHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
G+ C P E C G +CV L+ CD PDCS+G DE CN C +F+CG GK
Sbjct: 130 GTCKVEACDPEEFTCRGKHGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGK 188
Query: 217 CIPESW----------------------------------------KCDGFVDCLEDGSD 236
CI + W +CDG +DC DGSD
Sbjct: 189 CIQQRWVCDGDDDCGDDSDEVKCPTPTCQPHTHFSCADGHCISARWRCDGDIDC-PDGSD 247
Query: 237 E------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
E P T C + + +C C+ W+CD + DC D D+ +
Sbjct: 248 EMECVSTPKT-TSPCLSAEFECRDRLTCVHRAWVCDGDRDCPGGD---------DEAPEL 297
Query: 291 FNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-- 342
G V C L + CIP C+ + DC D +DE N P
Sbjct: 298 CRGNVTCRLDQFQCKDHSCIPGALYCNGDKDCP-----DGSDE-------FNCTRSKPVC 345
Query: 343 ---NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRG 397
E CG C+ LSK CD KPDC + EDE + +C N C+ +C TP G
Sbjct: 346 DKKTEFDCGGG-MCIPLSKSCDKKPDCPDFEDEPRDKCGENECAKNNGGCTQRCVDTPVG 404
Query: 398 AMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
C C G N+T C D DEC G+C Q C N ++ C C GY P + T
Sbjct: 405 YYCDCDKGYKLIDNRT-CEDIDECADPGACSQMCINEKGTFKCECHAGYARDPRDR--TR 461
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLN 480
+ P S++F+ DIR+I L+
Sbjct: 462 CKATEGHP-SLLFARRFDIRKISLD 485
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 146/381 (38%), Gaps = 96/381 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C + +C ++ +C+ LS C+G+ DC + DE C E CT +F C G+CIP
Sbjct: 53 CSLKQFQC-ANGKCIPLSWVCEGENDCGDNSDENIDECKKESRTCTSSEFRCKTGRCIPL 111
Query: 221 SWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDDI 276
SW+CD DC + +EP TC + C + C +C+P W+CD+ DCS +D+
Sbjct: 112 SWRCDNEKDCSDGSDEEPGTCKVEACDPEEFTCRGKHGECVPLTWMCDDNPDCSDGSDEK 171
Query: 277 VDNTDEDWDKFHQCFNG--------------------QVQCALSK------------KCI 304
N D+F C NG +V+C CI
Sbjct: 172 ACNETCRSDEF-TCGNGKCIQQRWVCDGDDDCGDDSDEVKCPTPTCQPHTHFSCADGHCI 230
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
W CD ++DC D +DE C E C CV + CDG
Sbjct: 231 SARWRCDGDIDCP-----DGSDEMECVSTPKTTSPCLSAEFECRDRLTCVHRAWVCDGDR 285
Query: 365 DCSNGEDEGP--------------------------FCNNKADCENLKCSHKCSPTP--- 395
DC G+DE P +CN DC + C+ +
Sbjct: 286 DCPGGDDEAPELCRGNVTCRLDQFQCKDHSCIPGALYCNGDKDCPDGSDEFNCTRSKPVC 345
Query: 396 --------RGAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
G MC CP ++ + +C + + +G C Q C +T + Y
Sbjct: 346 DKKTEFDCGGGMCIPLSKSCDKKPDCPDFEDEPRDKCGENECAKNNGGCTQRCVDTPVGY 405
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
C C +GY L D ++C ++
Sbjct: 406 YCDCDKGYKL-IDNRTCEDID 425
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 12/125 (9%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALS 255
P + C+ QF C GKCIP SW C+G DC ++ + + C + C + + +C +
Sbjct: 47 PEADGACSLKQFQCANGKCIPLSWVCEGENDCGDNSDENIDECKKESRTCTSSEFRCK-T 105
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDE 312
+CIP +W CD E DCS D +DE+ K C + C +C+P W+CD+
Sbjct: 106 GRCIPLSWRCDNEKDCS-----DGSDEEPGTCKVEACDPEEFTCRGKHGECVPLTWMCDD 160
Query: 313 EMDCS 317
DCS
Sbjct: 161 NPDCS 165
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +R +V+ ++WP+ L +D + +YW D+ LNT+ S DGS V+ +
Sbjct: 608 KIERAGMDGSHRQTIVSYEVKWPNGLTLDLVRKRVYWVDAKLNTISSCNYDGSARRVILY 667
Query: 167 PNEL 170
++
Sbjct: 668 STDV 671
>gi|227203895|dbj|BAH57291.1| putative ovarian lipoprotein receptor [Marsupenaeus japonicus]
Length = 1120
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 141/302 (46%), Gaps = 40/302 (13%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
CV CDG DC +G DE +EC +F+C CIP+ CDG DC DGSDE
Sbjct: 306 CVPKRWVCDGDKDCQDGSDEEDC--SECAASEFTCSNSNCIPQHATCDGEDDC-GDGSDE 362
Query: 238 ------PNTCIHQCFNGQVQC----ALSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
P C GQV C A+S CI H+ +C+ DC + DED D
Sbjct: 363 ALPRCQPTEPPAACPVGQVLCERPDAVSPPVCIHHDSVCNGVRDCPLGE-----DEDCD- 416
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI-------VDNTDEDWDKYFSHNA 337
C + C S+ CIP +W+CD E DC+ +D+ V N + S
Sbjct: 417 --SCSRYEYSCK-SRGCIPRSWVCDGEEDCTDGSDEGLAASCPNVKNDTVNPSVKISGGV 473
Query: 338 VLCHPNELR----CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
V P R CG + C+A CDG+ DCS+G DEG +C K+ N C HKC
Sbjct: 474 VTPRPGCARGLFECGLGD-CIAEFLVCDGQADCSDGSDEGSYCE-KSCRNNGGCQHKCHQ 531
Query: 394 TPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
P G C C G +KT C+D EC + +C Q C H Y+CSC GYTL D +
Sbjct: 532 EPTGRHCSCWTGFQLAADKTSCIDVKECDNETTCSQLCEEMHGYYLCSCLPGYTLGLDKR 591
Query: 452 SC 453
SC
Sbjct: 592 SC 593
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 116/249 (46%), Gaps = 43/249 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIP 219
AV C ++ C S+ C+ + CD PDC NGEDE C +C +F C G C+
Sbjct: 171 AVQCRDDQFTCHRSHSCIPGTWRCDSTPDCQNGEDEDD-CQLLKQCEDNEFQCPSGSCVN 229
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ W CDG DC EDGSDE + C + C N +C S CIP W+CD E +C
Sbjct: 230 KLWTCDGVHDC-EDGSDEKLDECKNVTCSNSYWRCR-SGMCIPRIWVCDREKECE----- 282
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE+ D C + ++ C C+P W+CD + DC D +DE+ +
Sbjct: 283 DGSDEE-DCPTTCPSHKITCR-DGTCVPKRWVCDGDKDCQ-----DGSDEE-------DC 328
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C +E C +SN C+ CDG+ DC +G DE +C PT
Sbjct: 329 SECAASEFTCSNSN-CIPQHATCDGEDDCGDGSDEA--------------LPRCQPTEPP 373
Query: 398 AMCFCPAGQ 406
A CP GQ
Sbjct: 374 AA--CPVGQ 380
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 96/344 (27%), Positives = 132/344 (38%), Gaps = 51/344 (14%)
Query: 110 KAGMHGENRSPLVTKNIQWPSSLVIDYNQDI--LYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ G+ G + +VT ++ P SL + N +I LYWCD L +ESV DG+ V
Sbjct: 2 RCGLDGSSCQKIVTSDLIQPMSLTFERNPNIKRLYWCDRVLGRIESVAEDGTDRRVFVE- 60
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESWKCD 225
N +S G + E A TP + PES +
Sbjct: 61 --------NLKSPVSLLVTGLYIMWSEESTSLLYQASKLGTPSVRKRALQLSAPESD--E 110
Query: 226 GFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ LE G P T H C C S+ C+ N ++ CS ++ D
Sbjct: 111 RSLKLLEVGWKLPEYLATAGHPCQQSNDTC--SQLCL-GNGFSEKVCACSFGFKLE-ADR 166
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
QC + Q C S CIP W CD DC + DED + C
Sbjct: 167 RTCAAVQCRDDQFTCHRSHSCIPGTWRCDSTPDCQ-----NGEDEDDCQLLKQ----CED 217
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH---KCSPTPRGAM 399
NE +C S CV CDG DC +G DE +C+N+ CS+ +C R M
Sbjct: 218 NEFQC-PSGSCVNKLWTCDGVHDCEDGSDE-----KLDECKNVTCSNSYWRC----RSGM 267
Query: 400 CFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C P C EC DGS ++ C T S+ +C +G
Sbjct: 268 CI------PRIWVCDREKECE-DGSDEEDCPTTCPSHKITCRDG 304
>gi|397520987|ref|XP_003830588.1| PREDICTED: low-density lipoprotein receptor [Pan paniscus]
Length = 972
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++ F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI ++CD + DC
Sbjct: 85 QFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTVLEDEKRLAHPFSL 611
>gi|395750478|ref|XP_002828723.2| PREDICTED: low-density lipoprotein receptor [Pongo abelii]
Length = 986
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 148/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+ CD DC +G DE C P F C CIP+ W C
Sbjct: 263 CSQDEFRC-HDGKCIYRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 321
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 322 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 377
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 378 ---DKSDEENCAVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----VGC 424
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 425 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 483
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 484 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 543
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 544 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 571
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 124/276 (44%), Gaps = 41/276 (14%)
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV----------DGSHNAVL-----CH 166
+T +++ P+ + L+ +H + S + DG+ ++ L C
Sbjct: 123 LTLSLRGPAQAARQLPRTGLHLLGAHTKPLPSFKSPLDQEALQSGDGATSSGLSLGDRCE 182
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPESW 222
NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+ W
Sbjct: 183 RNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQFW 241
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +DE
Sbjct: 242 RCDGQVDC-DNGSDEQGCPPRTCSQDEFRCH-DGKCIYRQFVCDSDRDC-----LDGSDE 294
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFSHN 336
C QC S CIP W CD + DC D +DE W + F +
Sbjct: 295 ASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQGD 347
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C E C S +C+ S CDG PDC + DE
Sbjct: 348 SSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 382
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 180 RCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 238
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI ++CD + DC
Sbjct: 239 QFWRCDGQVDCD-----NGSDEQGCPPRTCSQDEFRCH-DGKCIYRQFVCDSDRDC---- 288
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 289 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 335
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 101/243 (41%), Gaps = 49/243 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALS-------KKCIPHNWL-- 264
W+CDG VDC ++GSDE P I + LS + +P L
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCRKCGPAFAIRPIWVLGSGLTLSLRGPAQAARQLPRTGLHL 144
Query: 265 --------------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
D+E S D + D+ C + QC KCI + W+C
Sbjct: 145 LGAHTKPLPSFKSPLDQEALQSGDGATSSGLSLGDR---CERNEFQCQ-DGKCISYKWVC 200
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNG 369
D +C D +DE + S V C + CG N+C+ CDG+ DC NG
Sbjct: 201 DGSAECQ-----DGSDESQETCLS---VTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNG 252
Query: 370 EDE 372
DE
Sbjct: 253 SDE 255
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 10/85 (11%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C + QC KCI + W+CD +C D +DE + S V C + CG
Sbjct: 26 RCERNEFQCQ-DGKCISYKWVCDGSAECQ-----DGSDESQETCLS---VTCKSGDFSCG 76
Query: 349 SS-NQCVALSKFCDGKPDCSNGEDE 372
N+C+ CDG+ DC NG DE
Sbjct: 77 GRVNRCIPQFWRCDGQVDCDNGSDE 101
>gi|402904329|ref|XP_003914999.1| PREDICTED: low-density lipoprotein receptor [Papio anubis]
Length = 819
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 146/332 (43%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCIYRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + C S +CI W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQRCQGLEVPKRDSSPCSAFEFHCR-SGECIHSAWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCPVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C++L K C+ DC + DE +C N CSH C
Sbjct: 271 INVTLCEGPNKFKC-HSGECISLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHIC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGSYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A +IF++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLIFTNRHEVRKMTLDRS 417
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-EDGKCISYKWVCDGTAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE + C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGEVDC-ENGSDERDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W +
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCQGLEVPK 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ + CDG PDC + DE
Sbjct: 192 RDSSPCSAFEFHC-RSGECIHSAWRCDGGPDCKDKSDE 228
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 26 RCERNEFQCEDGKCISYKWVCDGTAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E+DC + +DE C + +C KCI ++CD + DC
Sbjct: 85 QFWRCDGEVDCE-----NGSDERDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D+ LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDFPSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 INVNGGNRKTVLEDEKRLAHPFSL 611
>gi|195112154|ref|XP_002000641.1| GI10346 [Drosophila mojavensis]
gi|193917235|gb|EDW16102.1| GI10346 [Drosophila mojavensis]
Length = 1017
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 137/312 (43%), Gaps = 34/312 (10%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A C P+E C S +CV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 213 ARTCSPDEYSCKSGVGECVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQR 271
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CD DC DG+DE + + C + + CI W+CD + DC +
Sbjct: 272 RWVCDHDNDC-GDGTDERDCPVVPCDSVAEHTCPNGACIAKRWVCDGDPDCPDASDERSC 330
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C + QC C+ H+WLCD + DC D D + S V C
Sbjct: 331 ANATKLVTPCLPHEYQCKDRITCLHHSWLCDGDRDCP--------DGDDEHASSCKNVTC 382
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR---- 396
P++ +CG + C+A C+G+ DC++G DE DC+ C+ T +
Sbjct: 383 RPDQFQCGDRS-CIAGHLTCNGQTDCADGSDE-------RDCKLAAPVKSCNATSQFDCG 434
Query: 397 GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
G C CP G++ +C + + +G C C + + Y C C EGY
Sbjct: 435 GGQCIPLSKVCDKRKDCPDGEDEPAKKCGQNECAVKNGGCMHRCVDHQVGYKCDCHEGYK 494
Query: 446 LRPDGKSCTAVN 457
L DG SC VN
Sbjct: 495 LSGDGHSCVDVN 506
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 101/238 (42%), Gaps = 40/238 (16%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKC 258
+ +C QF C G CIP + CDG DC + ++ N C + C + +C + C
Sbjct: 129 HTKCDEKQFECNNGACIPIRFVCDGDADCADHSDEQVNECKFREATCSSDHFRCT-NGNC 187
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALS-KKCIPHNWLCDEEMD 315
IP+ W CD+E DCS D +DED K C + C +C+P W+CD+ D
Sbjct: 188 IPNKWRCDQENDCS-----DGSDEDSTLCKARTCSPDEYSCKSGVGECVPLAWMCDQSKD 242
Query: 316 CSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
CS D +DE HN C +E CG+ +C+ CD DC +G DE
Sbjct: 243 CS-----DGSDE-------HNCNQTCRSDEFTCGNG-RCIQRRWVCDHDNDCGDGTDE-- 287
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNT 432
DC + C T CP G K D D D S +++C N
Sbjct: 288 -----RDCPVVPCDSVAEHT-------CPNGACIAKRWVCDGDPDCPDASDERSCANA 333
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 689 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNIISSANYDGSQRRQILY 748
Query: 167 PNEL 170
E
Sbjct: 749 STEY 752
>gi|195392954|ref|XP_002055119.1| GJ18973 [Drosophila virilis]
gi|194149629|gb|EDW65320.1| GJ18973 [Drosophila virilis]
Length = 1276
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 115/365 (31%), Positives = 159/365 (43%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG+ DC + DE + CT F+C G CI +++CDG DC +D SDE
Sbjct: 315 CIPRQWLCDGENDCKDFSDEVHCNRSSCTDEHFTCNDGYCISLAFRCDGERDC-DDNSDE 373
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 374 LKCPAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCQQ 428
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K QC +G+ +CA CIP W CD+E DC + + D + C P+E
Sbjct: 429 KPSQCTSGEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGNMSPEHPPTCGPDEF 483
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C + +C+ + CDG PDCS+ EDE G F C K + NLK
Sbjct: 484 TC-HNGRCILRTWLCDGYPDCSSAEDEVDCHLLCDPGQFLCPAKKNITNLKICVHQKHVC 542
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C + RG C C G N NK C D D
Sbjct: 543 DGQNDCPLGEDEVNCPVEQQCPEPRQCEQLCIKSARGRDECACRLGYLMNANKRNCTDID 602
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+VCSC GY LRPD ++C A+ +++ ++ DIR
Sbjct: 603 ECQYLTSPVCSQKCHNTLGSFVCSCEMGYILRPDLRTCKALG----GAMTLLVANRWDIR 658
Query: 476 RIHLN 480
R+ L+
Sbjct: 659 RVTLS 663
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G +R + +K + WP+ L IDY+Q LY+ D T+E++ DGS V
Sbjct: 1100 IERANMDGASRVIIASKKLIWPNGLAIDYDQHKLYFVDGGTKTLENMNFDGSSRKVIING 1159
Query: 164 LCHPNEL 170
L HP L
Sbjct: 1160 LGHPFGL 1166
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L IDY +YW D+ + +E +DGS N VL
Sbjct: 785 KIERAHMDGSQRQVIISKGVTWPNGLAIDYPNSKIYWADAKQHAIECSNLDGSERNKVLS 844
Query: 166 ----HPNEL 170
HP L
Sbjct: 845 THLPHPFAL 853
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 80/194 (41%), Gaps = 50/194 (25%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE---------PNTCIHQCFNG--Q 249
C+ C Q+ C +CI +C+ V C DGSDE + QC
Sbjct: 208 CHNSCEELQWQCSNCQCIESIGRCNREVQC-TDGSDEFDCDNMDDMMSKLQKQCEQSGLH 266
Query: 250 VQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
V C + +CI +WLCD +E C T+ D+F +C NG
Sbjct: 267 VMCPKTYRCINKDWLCDGDDDCGDYSDETHCGA-----RTNCTEDQF-ECQNG------- 313
Query: 301 KKCIPHNWLCDEEMDCS--TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
CIP WLCD E DC +D++ N D++F+ N C++L+
Sbjct: 314 -FCIPRQWLCDGENDCKDFSDEVHCNRSSCTDEHFTCN-------------DGYCISLAF 359
Query: 359 FCDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 360 RCDGERDCDDNSDE 373
>gi|395543789|ref|XP_003773795.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Sarcophilus harrisii]
Length = 1921
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 156/331 (47%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 160 CSEKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 214
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 215 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 269
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 270 --DQSDERNCTTSMCMAEQFRCT-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENT 319
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ CG+ +C+ K C+G DC++ DE P N + + N C+
Sbjct: 320 GSPQCASDQFLCGNG-RCIGQRKLCNGVNDCADNSDESPQQNCRPWTGQENCNVNNGGCA 378
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 379 QKCQMLRGAVQCTCHTGYRLMEDGRSCHDVNECAEEGYCSQGCTNSDGAFQCWCEAGYEL 438
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 439 RPDRRSCKALG---PEPV-LLFANRIDIRQV 465
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 56 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 114
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + +C
Sbjct: 115 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSEKEFRC 167
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 168 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 192
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 895 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 952
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1432 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1488
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
FP ++E++ + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1489 AAFPRKGYLFWTDWGHLAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHL 1548
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1549 DRIESADLNGKLRQVLVSHVSHPFAL 1574
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1203 KLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSQLLWADAHTERIEATDLNGANRRTLVS 1262
Query: 167 P 167
P
Sbjct: 1263 P 1263
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 502 DRILRANLNGSNVEEVVSTGLESPGGLAIDWLHDKLYWTDSGTSRIEVANLDGAHRKVLL 561
Query: 166 HPN 168
N
Sbjct: 562 WQN 564
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGS+ +
Sbjct: 590 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGSNRKAV 647
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1421 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1477
>gi|357619788|gb|EHJ72227.1| lipophorin receptor [Danaus plexippus]
Length = 837
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 151/371 (40%), Gaps = 77/371 (20%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW- 222
C P E C G +CV L+ CD DCS+G DE CN C +F+CG GKCI + W
Sbjct: 60 CGPEEFTCRGKRGECVPLTWMCDDNVDCSDGSDEKA-CNETCRSDEFTCGNGKCIQQRWV 118
Query: 223 ---------------------------------------KCDGFVDCLEDGSDEPN---- 239
+CDG +DC DGSDE
Sbjct: 119 CDGDDDCGDGSDEVKCPAPTCQPHSHFSCADGHCVTARWRCDGDIDC-PDGSDEMGCATT 177
Query: 240 -TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
C + +C C+ W+CD + DC+ + D+ + G V C
Sbjct: 178 PKITSPCIATEFECRDRITCVHRAWVCDGDKDCA---------DGGDEAPELCRGNVTCR 228
Query: 299 LSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
L + CIP C+ + DC D +DE H V E CG
Sbjct: 229 LDQFTCKDHSCIPGALYCNGDKDCP-----DGSDEVNCTKPKH--VCDKKTEFDCGGG-M 280
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN-PN 409
C+ LSK CD +PDC N EDE + +C N C+ KC TP G C C G +
Sbjct: 281 CIPLSKVCDKRPDCPNFEDEPRDRCGEDECAVNNGGCTQKCVDTPVGYYCDCEKGYKLSD 340
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C D DECL G+C Q CTN ++ C C GY P + T + P S++F+
Sbjct: 341 NRTCEDIDECLDPGACSQICTNEKGTFKCECHPGYARDPRDR--TRCKATEGHP-SLLFA 397
Query: 470 STVDIRRIHLN 480
DIR+I L+
Sbjct: 398 RRFDIRKISLD 408
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 131/338 (38%), Gaps = 95/338 (28%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-KCIPHNW 263
CT F C G CIP +W+CD DC DGSDE + + C + C + +C+P W
Sbjct: 21 CTGHNFVCATGHCIPGAWRCDDTPDC-PDGSDEHHCEVESCGPEEFTCRGKRGECVPLTW 79
Query: 264 LCDEEMDCS--TDDIVDNTDEDWDKFHQCFNG--------------------QVQCALSK 301
+CD+ +DCS +D+ N D+F C NG +V+C +
Sbjct: 80 MCDDNVDCSDGSDEKACNETCRSDEF-TCGNGKCIQQRWVCDGDDDCGDGSDEVKCP-AP 137
Query: 302 KCIPHN-------------WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C PH+ W CD ++DC D +DE C E C
Sbjct: 138 TCQPHSHFSCADGHCVTARWRCDGDIDCP-----DGSDEMGCATTPKITSPCIATEFECR 192
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGP--------------------------FCNNKADC 382
CV + CDG DC++G DE P +CN DC
Sbjct: 193 DRITCVHRAWVCDGDKDCADGGDEAPELCRGNVTCRLDQFTCKDHSCIPGALYCNGDKDC 252
Query: 383 EN-------LKCSHKCSPTPR----GAMCF-----------CPAGQNPNKTQCVDADECL 420
+ K H C G MC CP ++ + +C + DEC
Sbjct: 253 PDGSDEVNCTKPKHVCDKKTEFDCGGGMCIPLSKVCDKRPDCPNFEDEPRDRCGE-DECA 311
Query: 421 I-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +G C Q C +T + Y C C +GY L D ++C ++
Sbjct: 312 VNNGGCTQKCVDTPVGYYCDCEKGYKLS-DNRTCEDID 348
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +R +V+ +++WP+ L +D + +YW D+ +NT+ S DGS V+ +
Sbjct: 531 KIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKVNTISSCNYDGSGRRVVLY 590
Query: 167 PNEL 170
+E+
Sbjct: 591 SSEV 594
>gi|395851057|ref|XP_003798083.1| PREDICTED: low-density lipoprotein receptor [Otolemur garnettii]
Length = 925
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 110/337 (32%), Positives = 155/337 (45%), Gaps = 39/337 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C +E RC +C++ CD + DC +G DE C+P F C CIP+
Sbjct: 178 AKTCSQDEFRC-HDGKCISQQFVCDSERDCLDGSDEASCPVTTCSPANFQCNDSTCIPDL 236
Query: 222 WKCDGFVDCLEDGSDE-PNTCIHQ-----------CFNGQVQCALSKKCIPHNWLCDEEM 269
W CDG DC +DGSDE P+ C + C + + C S +CI +W CD
Sbjct: 237 WACDGDPDC-KDGSDEWPDRCGGRETLATQGNNGPCSSHEFHCH-SGECIHSSWHCDGGP 294
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC D +DE+ C + QC L C+ + CD E DC D +DE
Sbjct: 295 DCK-----DESDEENCAVSTCRPDEFQC-LDGTCVHGSRQCDWEYDCK-----DMSDE-- 341
Query: 330 DKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLK 386
+ N C PN+ +C S +C+ L K C+ DC + DE +C N
Sbjct: 342 --HGCINVTRCEGPNKFKC-HSGECITLDKVCNSVRDCRDWSDEPIKECGTNECLDNNGG 398
Query: 387 CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C+ G C CP G Q ++ +C D DEC +C Q C N SY C C +G+
Sbjct: 399 CSHICNDLKIGYKCLCPDGFQLVDQRRCEDIDECQDPDTCSQICVNLEGSYKCECEDGFQ 458
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
L P K+C AV A + F++ ++R++ L+ S
Sbjct: 459 LDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 491
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 142/354 (40%), Gaps = 75/354 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG P+C +G DE P + C FSCG + +CIP+
Sbjct: 99 CERNEFQC-QDGKCISYKWVCDGSPECPDGSDEFPQTCMSVTCKSVDFSCGGRVNRCIPQ 157
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+G DE C + +C KCI ++CD E DC +D +
Sbjct: 158 FWRCDGQVDC-ENGLDEQGCPAKTCSQDEFRCH-DGKCISQQFVCDSERDC-----LDGS 210
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE C QC S CIP W CD + DC D +DE D+ +
Sbjct: 211 DEASCPVTTCSPANFQCNDS-TCIPDLWACDGDPDCK-----DGSDEWPDRCGGRETLAT 264
Query: 341 HPNELRCGS------SNQCVALSKFCDGKPDCSNGEDE---------------------- 372
N C S S +C+ S CDG PDC + DE
Sbjct: 265 QGNNGPCSSHEFHCHSGECIHSSWHCDGGPDCKDESDEENCAVSTCRPDEFQCLDGTCVH 324
Query: 373 -GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD-------------- 417
C+ + DC+++ H C R C P + +C+ D
Sbjct: 325 GSRQCDWEYDCKDMSDEHGCINVTR---CEGPNKFKCHSGECITLDKVCNSVRDCRDWSD 381
Query: 418 ---------ECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
ECL +G C C + + Y C C +G+ L D + C ++ QD
Sbjct: 382 EPIKECGTNECLDNNGGCSHICNDLKIGYKCLCPDGFQL-VDQRRCEDIDECQD 434
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 79/180 (43%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C DGSDE P TC+ C + C
Sbjct: 92 GTAVEDRCERNEFQCQDGKCISYKWVCDGSPEC-PDGSDEFPQTCMSVTCKSVDFSCGGR 150
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + DE C + +C KCI ++CD E
Sbjct: 151 VNRCIPQFWRCDGQVDCE-----NGLDEQGCPAKTCSQDEFRCH-DGKCISQQFVCDSER 204
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S C P +C S C+ CDG PDC +G DE P
Sbjct: 205 DC-----LDGSDE-----ASCPVTTCSPANFQCNDST-CIPDLWACDGDPDCKDGSDEWP 253
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + W
Sbjct: 551 DGLAVDWVHGNIYWTDSVLGTVSVADTKGMKRKTLFKEKGSKPRAIVVDPVHGFMYWTDW 610
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA +++K G++G + LVT+ IQWP+ + +D + LYW DS L+++ S+
Sbjct: 611 GTPA--------KIKKGGLNGVDVYSLVTEGIQWPNGITLDLSSGRLYWVDSKLHSISSI 662
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G + L HP L
Sbjct: 663 DVNGGNRKTVLEDKKRLAHPFSL 685
>gi|51874224|gb|AAU12845.1| vitellogenin receptor [Bombyx mori]
Length = 758
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 139/299 (46%), Gaps = 34/299 (11%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCL----EDGSDEPNTC----IHQCFNGQVQCA 253
+ C PG + C +CI +CDG DC E+ DEP IH+C + C
Sbjct: 40 SVSCKPGYYQCRDRECIELKKRCDGHQDCFDYSDEEECDEPVVVEEPKIHRCAEWEYSCE 99
Query: 254 LSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
++ C+P C+ + DC TDE + +G C +C+ N +CD
Sbjct: 100 RNRSICLPITARCNMKTDCP-----GGTDEIGCDYRCTPHGMFGCKQQIRCLAMNRVCDG 154
Query: 313 EMDCSTDDIVDNTDED---WDKYFSHNAVLCHP-----NELRCGSSNQCVALSKFCDGKP 364
+C DD D T + ++ V+ +P + CG+ QC+ ++ CD P
Sbjct: 155 NKEC--DDGSDETPDACALVNRTSHLYPVMLYPAAECRDGFLCGN-GQCIEWAEVCDRTP 211
Query: 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID 422
+C +G DE C + C+N C+H C TP G C CPAG + P++ C D DEC
Sbjct: 212 NCFDGSDESIHCFSA--CDNNTCAHACQATPLGPRCLCPAGYSAAPDRRTCADVDECRA- 268
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G C Q C NT S++CSC GY LR D +SC AV SI++ S +R + +G
Sbjct: 269 GLCSQACVNTPGSFLCSCHHGYALRSDRRSCKAVT----GNMSILYVSGNTVRSVSADG 323
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 45/100 (45%), Gaps = 28/100 (28%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGP-----------------FCNAECTPGQFSCGM 214
C +C+A+++ CDG +C +G DE P + AEC G F CG
Sbjct: 139 CKQQIRCLAMNRVCDGNKECDDGSDETPDACALVNRTSHLYPVMLYPAAECRDG-FLCGN 197
Query: 215 GKCIPESWKCDGFVDCLEDGSDEP---------NTCIHQC 245
G+CI + CD +C DGSDE NTC H C
Sbjct: 198 GQCIEWAEVCDRTPNCF-DGSDESIHCFSACDNNTCAHAC 236
>gi|51874222|gb|AAU12844.1| vitellogenin receptor [Bombyx mori]
Length = 498
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 139/299 (46%), Gaps = 34/299 (11%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCL----EDGSDEPNTC----IHQCFNGQVQCA 253
+ C PG + C +CI +CDG DC E+ DEP IH+C + C
Sbjct: 40 SVSCKPGYYQCRDRECIELKKRCDGHQDCFDYSDEEECDEPVVVEEPKIHRCAEWEYSCE 99
Query: 254 LSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
++ C+P C+ + DC TDE + +G C +C+ N +CD
Sbjct: 100 RNRSICLPITARCNMKTDCP-----GGTDEIGCDYRCTPHGMFGCKQQIRCLAMNRVCDG 154
Query: 313 EMDCSTDDIVDNTDED---WDKYFSHNAVLCHP-----NELRCGSSNQCVALSKFCDGKP 364
+C DD D T + ++ V+ +P + CG+ QC+ ++ CD P
Sbjct: 155 NKEC--DDGSDETPDACALVNRTSHLYPVMLYPAAECRDGFLCGN-GQCIEWAEVCDRTP 211
Query: 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID 422
+C +G DE C + C+N C+H C TP G C CPAG + P++ C D DEC
Sbjct: 212 NCFDGSDESIHCFSA--CDNNTCAHACQATPLGPRCLCPAGYSAAPDRRTCADVDECRA- 268
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G C Q C NT S++CSC GY LR D +SC AV SI++ S +R + +G
Sbjct: 269 GLCSQACVNTPGSFLCSCHHGYALRSDRRSCKAVT----GNMSILYVSGNTVRSVSADG 323
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 19/93 (20%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGP-----------------FCNAECTPGQFSCGM 214
C +C+A+++ CDG +C +G DE P + AEC G F CG
Sbjct: 139 CKQQIRCLAMNRVCDGNKECDDGSDETPDACALVNRTSHLYPVMLYPAAECRDG-FLCGN 197
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN 247
G+CI + CD +C DGSDE C C N
Sbjct: 198 GQCIEWAEVCDRTPNCF-DGSDESIHCFSACDN 229
>gi|357627884|gb|EHJ77415.1| hypothetical protein KGM_05659 [Danaus plexippus]
Length = 2815
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 114/238 (47%), Gaps = 19/238 (7%)
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
Q CA +C+P +W CD C D D D W+ C GQ +C S C+ +W
Sbjct: 58 QWPCADGSRCLPASWRCDTRPHCP--DASDEIDCVWNT--TCGAGQFRCVNSGLCVAASW 113
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ----CVALSKFCDGKP 364
CD + DC D D D Y C + RC ++ + CVA++ FCDG
Sbjct: 114 RCDGDPDCGPHDSSDE-----DPYMCQKDFKCPGGQARCATAEEGQFLCVAVAHFCDGIR 168
Query: 365 DCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLID 422
C++G DE C+N ++ C L C C PT G C C G N CVD+DEC +
Sbjct: 169 HCTDGSDEWDICDNFTESSCSALGC--PCRPTHEGYKCSCAPGYEHNGRTCVDSDECSWE 226
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+C Q C NT SYVCSC GY L PD SC + AS++ +S + + R L+
Sbjct: 227 GTCTQRCRNTAGSYVCSCVTGYALSPDNSSCDPDS--SSPYASLMVASQLGVHRQALH 282
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 144/405 (35%), Gaps = 106/405 (26%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQF-SCGMGKC 217
LC CG +C+ S CDG DC NG DE GP N C QF C +C
Sbjct: 922 LCDQGSFDCGH-GRCINSSLVCDGDKDCPNGSDEDASANGPCANVTCVDDQFMRCDTNRC 980
Query: 218 IPESWKCDGFVDCLEDGSDEPNT------------------------------------- 240
IP+SW CDG C G P
Sbjct: 981 IPKSWACDGMKGCACVGQTVPTVKTRRRRGAGRRRAARLSGRACTPGAASRPPGAVTAPR 1040
Query: 241 ----CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-------------- 282
G +C C+P ++CD DC D DE
Sbjct: 1041 TAGPGTAPTRAGSFRCG-PGACVPWEYVCDGHADCK-----DAADERACPAAPAPPLPSD 1094
Query: 283 -----------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+ +K C + QC +++CI + CD +DC +D +DE
Sbjct: 1095 LTPYGHIHHQNNSEKHGLCEEHEFQCN-NRECIRQEFRCDSRVDC-----LDGSDEQGCT 1148
Query: 332 YFSHNAVL---------------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +RC ++++CV L + CDG DC +G DE C
Sbjct: 1149 SIHSTPATTTTTAFTTTEAAKDECALPSMRCDNNSRCVPLQQQCDGSMDCGDGADEADRC 1208
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHL 434
C CSH C PTPRG C CP + C A C G C QTC
Sbjct: 1209 GEPM-CLVAACSHSCHPTPRGPACSCPPPLVLKEDGYTCAQAHPCTAWGVCSQTCRPHKD 1267
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
Y C+C +GY L DG +C + + A ++FS+ ++R + L
Sbjct: 1268 RYKCTCYKGYRLADDGFTCKSTEAGR---ALLVFSTRHEVRGVEL 1309
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 110/273 (40%), Gaps = 39/273 (14%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+ G R LVT++I P+ L +++ +LYW D+ L+ +E +R DGSH V+
Sbjct: 2413 IERVYASGRGRQALVTRDILMPNGLALEHEARLLYWADARLDKLERMRYDGSHRRVVTRA 2472
Query: 166 ---HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
HP + G VA + + E G A T C + P
Sbjct: 2473 RSEHPFAVAAGGG--WVAWTDWL--ARGVFAAERGGGAVRALRTDVPRPCAVVLVAPHQQ 2528
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
C + +G C C N Q CA C L + C+ D+
Sbjct: 2529 TCSSDPCAVMNGG-----CAELCVVDSNRQASCA----CGAGRVLARDGRACARPDM--- 2576
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
C GQ CA C+P + +CD C+ D D +DE D Y+ + V
Sbjct: 2577 ---------SCTPGQFACA-EGPCLPQHLVCDGIPHCAGDR--DASDE--DLYYCTSRV- 2621
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + CG+ +C A + CDG+ DC +G DE
Sbjct: 2622 CPVGWMSCGAGGRCAAPEQRCDGRVDCDDGSDE 2654
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 88/223 (39%), Gaps = 49/223 (21%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C + CG+ +C A + CDG+ DC +G DE + +C+ Q+ C G C+ +
Sbjct: 2621 VCPVGWMSCGAGGRCAAPEQRCDGRVDCDDGSDE---LDCDCSVEQYRCDDGSCVEVGAR 2677
Query: 224 CDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG C DGSDE C CA ++C + CD +DC DD D
Sbjct: 2678 CDGVSQC-PDGSDEAECPRSACDVPDARSCASGEQCYGGDARCDGHLDC--DDGSD---- 2730
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
E DC+ + + D D + C
Sbjct: 2731 ------------------------------EADCAESTLAPSFDGS-DGFEEQPVQSCSD 2759
Query: 343 NELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNN 378
++ RCG S + C+ L+ CDG+ DC++G DE C
Sbjct: 2760 DQFRCGGSGESGGDVVECIPLAWRCDGRADCTDGSDETTHCGT 2802
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
P R+ M G R PL+T +++WP+ LV+D LYWCD++LN +E VRV S
Sbjct: 740 PSGGRILSGSMDGSGRRPLITDDLRWPAGLVLDSPHMTLYWCDTYLNKLERVRVTSSGEK 799
Query: 163 VLCHPNELRCGSSNQCVALSKF 184
EL + Q L +
Sbjct: 800 APGAVRELVAAHTKQLPILKPY 821
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 42/87 (48%), Gaps = 11/87 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS--NGEDEGPFC---NAECTPGQFSCGMGK--- 216
C + RC +S CVA S CDG PDC + DE P+ + +C GQ C +
Sbjct: 95 CGAGQFRCVNSGLCVAASWRCDGDPDCGPHDSSDEDPYMCQKDFKCPGGQARCATAEEGQ 154
Query: 217 --CIPESWKCDGFVDCLEDGSDEPNTC 241
C+ + CDG C DGSDE + C
Sbjct: 155 FLCVAVAHFCDGIRHC-TDGSDEWDIC 180
>gi|451173800|gb|AGF33811.1| vitellogenin receptor [Helicoverpa armigera]
Length = 1581
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 155/350 (44%), Gaps = 54/350 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE C S + C+ + CDG DC++G DE N C+PG + C +CI +C
Sbjct: 1026 CADNEFMCASGS-CIMKTWTCDGDQDCNDGSDEVDCVNMTCSPGFYQCRDRECIEVRRRC 1084
Query: 225 DGFVDCLEDGSDEPN---TCIHQCFNGQVQCAL--------SKKCIPHNWLCDEEMDCST 273
DG DC +D SDE + + + +CA + C+P C+ ++DC
Sbjct: 1085 DGHQDC-KDFSDEEDCEEPQVVEFVEESPRCAPWEYACEHNTSICLPLTARCNMKVDCP- 1142
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-- 331
+TDE + +G C C+ + LC+ + DC VD +DE D
Sbjct: 1143 ----GSTDEHGCDYRCAQHGMFACGQQLMCVAMSKLCNGKRDC-----VDGSDETPDACA 1193
Query: 332 ---------YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
H+ C L CGS QC+ + CD K DC +G DEG C+ C
Sbjct: 1194 RVNKTSYLFPIVHSPADCSEGFL-CGSG-QCLEWRQLCDHKHDCVDGSDEGGLCDTA--C 1249
Query: 383 ENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNT-------- 432
N CS+KC PTP G C CP G + +KT C D DEC D C Q C N
Sbjct: 1250 NNSTCSYKCQPTPLGKQCVCPFGLKLSKDKTSCEDIDECTED-VCSQECVNVVKEMPNGS 1308
Query: 433 -HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ +C+C GY R D +SC A+ +I++ S +R I +G
Sbjct: 1309 ISKTIMCTCHHGYAPRSDRRSCKAIR----GNMAILYVSGNTVRSISADG 1354
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 131/313 (41%), Gaps = 64/313 (20%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-------HQCFNGQVQCALSKKCIPH 261
+F C G CI CDGFVDC EDG+DE N CI H Q C +KKCIP
Sbjct: 4 KFPCMGGGCISHLQYCDGFVDC-EDGTDE-NFCIDHKPDEIHCNETHQYICQDTKKCIPL 61
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCS 317
W+C+ E DC D +DE + C KCI WLCD DC
Sbjct: 62 TWICNNEADCD-----DGSDEANCTQVPSVSSNSTCKGFPCGDGKCISFLWLCDGVYDCE 116
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCH------------------PNE--LRCGSSNQCVALS 357
D +DE H+ LCH P+E RC S+ C+ S
Sbjct: 117 -----DKSDE-------HDVDLCHLIPRRPNFDGHSCQELSSPDERNYRCLDSSYCLPAS 164
Query: 358 KFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHK---CSPTPRGAMCFCPAG-----QNP 408
CDG DC +G DEGPFC N C N C C+P G C C N
Sbjct: 165 MMCDGIQDCRDGSDEGPFCVNWHTMCTNYNCFGNDTVCAPERFGPTCLCLPSVSMRQYNY 224
Query: 409 NKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
QC D +ECL++ C TC N Y C+C GYT G C A P+ A +
Sbjct: 225 VTKQCDDVNECLLERPHCSHTCVNADGHYTCNCDPGYTKDEYGYLCYATG-PE---AMLF 280
Query: 468 FSSTVDIRRIHLN 480
FS+ DIR + +
Sbjct: 281 FSTRNDIRYLKIK 293
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 82/194 (42%), Gaps = 42/194 (21%)
Query: 141 LYWCDSHLN----TVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGE 195
L +CD ++ T E+ +D + + C+ ++ C + +C+ L+ C+ + DC +G
Sbjct: 16 LQYCDGFVDCEDGTDENFCIDHKPDEIHCNETHQYICQDTKKCIPLTWICNNEADCDDGS 75
Query: 196 DEG-----PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------------P 238
DE P ++ T F CG GKCI W CDG DC ED SDE P
Sbjct: 76 DEANCTQVPSVSSNSTCKGFPCGDGKCISFLWLCDGVYDC-EDKSDEHDVDLCHLIPRRP 134
Query: 239 NTCIHQCF------NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKF 287
N H C +C S C+P + +CD DC D +DE +W
Sbjct: 135 NFDGHSCQELSSPDERNYRCLDSSYCLPASMMCDGIQDCR-----DGSDEGPFCVNWHTM 189
Query: 288 ---HQCFNGQVQCA 298
+ CF CA
Sbjct: 190 CTNYNCFGNDTVCA 203
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 54/144 (37%), Gaps = 49/144 (34%)
Query: 160 HNAVLCHPNELR---------------------------CGSSNQCVALSKFCDGKPDCS 192
HN +C P R CG CVA+SK C+GK DC
Sbjct: 1123 HNTSICLPLTARCNMKVDCPGSTDEHGCDYRCAQHGMFACGQQLMCVAMSKLCNGKRDCV 1182
Query: 193 NGEDEGP----------------FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+G DE P A+C+ G F CG G+C+ CD DC+ DGSD
Sbjct: 1183 DGSDETPDACARVNKTSYLFPIVHSPADCSEG-FLCGSGQCLEWRQLCDHKHDCV-DGSD 1240
Query: 237 EPNTCIHQCFNGQVQCALSKKCIP 260
E C C N S KC P
Sbjct: 1241 EGGLCDTACNNS----TCSYKCQP 1260
>gi|281362594|ref|NP_001097933.2| lipophorin receptor 1, isoform J [Drosophila melanogaster]
gi|39840984|gb|AAR31128.1| RE40649p [Drosophila melanogaster]
gi|272477177|gb|ABW08773.2| lipophorin receptor 1, isoform J [Drosophila melanogaster]
Length = 996
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 157/370 (42%), Gaps = 69/370 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQFSCGMGKCIPESWK 223
C ++ RCG+ N C+ CD + DC++G DE CN C +F+CG G+CI + WK
Sbjct: 179 CSSDQFRCGNGN-CIPNKWRCDQESDCADGSDEANELCNQTCRADEFTCGNGRCIQKRWK 237
Query: 224 ----------------------------------------CDGFVDCLEDGSDEPN---- 239
CDG DC DGSDE +
Sbjct: 238 CDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERSCANV 296
Query: 240 -TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQ 296
C + + QC C+ H+WLCD + DC D DE K C Q Q
Sbjct: 297 TKTTTPCLSHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRADQFQ 351
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVA 355
C + CIP + C+ + DC+ D D D N C+ +E CG QCV
Sbjct: 352 CG-DRSCIPGHLTCNGDKDCA--DGSDERDCGLSLSLGINQGGCNATSEFDCGG-GQCVP 407
Query: 356 LSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKT 411
LSK CD + DC +GEDE G N+ +N C H+C G C C G +P+K
Sbjct: 408 LSKVCDKRKDCPDGEDEPAGKCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKR 467
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSS 470
C D +EC + G C Q C N + C C GY P + C A + AS++ +
Sbjct: 468 NCQDINECEVPGKCSQICVNEIGGFKCECEAGYMRDPKNHTRCKA----SEGHASLLLAR 523
Query: 471 TVDIRRIHLN 480
DIR+I L+
Sbjct: 524 RHDIRKIALD 533
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 95/231 (41%), Gaps = 55/231 (23%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 129 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 187
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDE------DWDKFHQCFNG--------------- 293
+ CIP+ W CD+E DC+ D D +E D+F C NG
Sbjct: 188 NGNCIPNKWRCDQESDCA--DGSDEANELCNQTCRADEF-TCGNGRCIQKRWKCDHDDDC 244
Query: 294 -----QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ +C + + CI W+CD + DCS D +DE +
Sbjct: 245 GDGSDEKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKT 299
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C +E +C C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 300 TTPCLSHEYQCKDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 345
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 656 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 715
Query: 167 PNE 169
E
Sbjct: 716 SGE 718
>gi|432875813|ref|XP_004072920.1| PREDICTED: low-density lipoprotein receptor-related protein 2
[Oryzias latipes]
Length = 1154
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/264 (34%), Positives = 124/264 (46%), Gaps = 24/264 (9%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
++C+ S CDG+ DC++G DE EC+ +F C G+C+ S CDG DC DGS
Sbjct: 252 SRCIPSSFLCDGEQDCADGSDEASCAEKECSSSEFKCTSGQCVSASMHCDGHPDCW-DGS 310
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNG 293
DE + +C SK+C+ W+CD + DC D +DE C +
Sbjct: 311 DEESCVKAPVCTTNHRCTQSKECLLQEWMCDGDQDCK-----DGSDEKDCPVAPADCEDF 365
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC CIP W CD DC DN+DE + C P+E +C S +C
Sbjct: 366 QWQCRSGSACIPTAWRCDGTKDCD-----DNSDE-----HECGKLTCRPHEFQC-VSKEC 414
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQN--PNK 410
+ + C+G +C++G DEG C K + E +CS C TP G+ C C AG +
Sbjct: 415 LDPALVCNGITNCADGSDEGGSCQTKCPEAEQTRCSQGCYSTPEGSRCRCDAGYKLLEDG 474
Query: 411 TQCVDADEC--LIDGSCDQTCTNT 432
CVD +EC C C NT
Sbjct: 475 LTCVDVNECEGRTPAVCSHLCLNT 498
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 104/241 (43%), Gaps = 41/241 (17%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ V + C + C ++C+ S CDG+ DC++G DE C + C QF C
Sbjct: 14 IFVTAGSSTKRCKVGTVLCKDGSECIQYSLLCDGEQDCADGSDE-EDCESGCREDQFQCA 72
Query: 214 MGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
GK CI + CDG C +D SDE C+ + N QC +C+P ++CD E DC
Sbjct: 73 HGKKCIDKQHVCDGTAHC-QDHSDE-QQCMKRTDNCAHQCDDKNRCLPATFVCDGERDC- 129
Query: 273 TDDIVDNTDE---DWDKFHQ------------------CFNGQVQCALSKKCIPHNWLCD 311
+D TDE D DK + C G C C+ +N +CD
Sbjct: 130 ----LDGTDEASCDGDKQEEEEDITVPTAVPSEPLPIRCPLGSKLCRDKSDCVHYNHVCD 185
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
E DC D +DE+ C ++ +C +C+ S+ CDG P C + D
Sbjct: 186 GEPDCR-----DGSDEE------DCLSTCDSDQFQCAHGKKCIEKSQVCDGVPQCQDRSD 234
Query: 372 E 372
E
Sbjct: 235 E 235
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 60/130 (46%), Gaps = 17/130 (13%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C G V C +CI ++ LCD E DC+ D +DE+ D C Q QCA KKC
Sbjct: 24 RCKVGTVLCKDGSECIQYSLLCDGEQDCA-----DGSDEE-DCESGCREDQFQCAHGKKC 77
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I +CD C D++DE + N +C N+C+ + CDG+
Sbjct: 78 IDKQHVCDGTAHCQ-----DHSDEQQCMKRTDNCA------HQCDDKNRCLPATFVCDGE 126
Query: 364 PDCSNGEDEG 373
DC +G DE
Sbjct: 127 RDCLDGTDEA 136
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + +C S + C+ + CDG DC + DE C P +F C +C+ + C
Sbjct: 362 CEDFQWQCRSGSACIPTAWRCDGTKDCDDNSDEHECGKLTCRPHEFQCVSKECLDPALVC 421
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNG-QVQCALSKKCIPHNWLC 265
+G +C DGSDE +C +C Q +C+ P C
Sbjct: 422 NGITNCA-DGSDEGGSCQTKCPEAEQTRCSQGCYSTPEGSRC 462
>gi|327388682|gb|AEA72687.1| very low-density lipoprotein receptor-like protein [Branchiostoma
lanceolatum]
Length = 858
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 150/350 (42%), Gaps = 59/350 (16%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CD DC NG DE C P + +C GKCI W CD DC D SDE
Sbjct: 125 CIPRTWVCDRDADCENGRDEQECDQLTCDPTEHTCDNGKCITVRWVCDQDDDC-GDNSDE 183
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKFHQCFNG 293
N C + + C + CIP W CD + DC +D TDE +C +
Sbjct: 184 KNCPTPTCSSNEFMCQNNSYCIPQRWKCDGDFDC-----LDFTDEKDCPSVPPGTECSSR 238
Query: 294 QVQCALSKKCIPHNWLCDEEMDCS--TDDI------------------VDNTDE-DWDKY 332
+ C ++ C+ +W CD + DC+ +D+I +D T + D +
Sbjct: 239 EFTCG-NRDCVHISWRCDGDEDCADGSDEIDCVRQCSEDQFRCDNGNCIDGTRQCDGKRD 297
Query: 333 FSHNAVLCH--PNELRC-------------GSSNQCVALSKFCDGKPDCSNGEDE-GPFC 376
+ H P +RC G QC+ SK CD DC++G DE G +
Sbjct: 298 CEDGSDERHDCPEIIRCDLTREFECINRNTGVLEQCIPFSKVCDRNDDCADGSDEPGTWT 357
Query: 377 N-----NKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTC 429
N ++ +N CS C TP C C G +K C D DEC G+C Q C
Sbjct: 358 NVQCNVDECKVDNGSCSQGCVDTPHSYYCTCDNGFELQDDKRTCKDKDECADFGTCSQLC 417
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
NTH Y C C EGYTL P C A + E +IF++ D+R I L
Sbjct: 418 ENTHGGYKCECVEGYTLDPRHGFCKA----EGEELKLIFANRRDLRMIDL 463
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 151/392 (38%), Gaps = 103/392 (26%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
R+ GS C ++ C + +C+ S CD DC + DE C+ +F+C
Sbjct: 20 RIPGSRADAHCGSSQFTC-HNGRCIPSSWKCDEDDDCGDNSDETDCPVRTCSDSEFTCDD 78
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKK--CIPHNWLCDEEMD 270
KCIP W+CDG DC DGSDE +Q C + C + CIP W+CD + D
Sbjct: 79 SKCIPSRWQCDGDSDCA-DGSDEKADICNQRTCRSDHFSCEENGGGICIPRTWVCDRDAD 137
Query: 271 CST----------------------------------DDIVDNTDEDWDKFHQCFNGQVQ 296
C DD DN+DE C + +
Sbjct: 138 CENGRDEQECDQLTCDPTEHTCDNGKCITVRWVCDQDDDCGDNSDEKNCPTPTCSSNEFM 197
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C + CIP W CD + DC +D TDE D C E CG+ + CV +
Sbjct: 198 CQNNSYCIPQRWKCDGDFDC-----LDFTDEK-DCPSVPPGTECSSREFTCGNRD-CVHI 250
Query: 357 SKFCDGKPDCSNGEDE----------------------GPFCNNKADCEN---------- 384
S CDG DC++G DE C+ K DCE+
Sbjct: 251 SWRCDGDEDCADGSDEIDCVRQCSEDQFRCDNGNCIDGTRQCDGKRDCEDGSDERHDCPE 310
Query: 385 ---------LKCSHKCSPTPRGAMCF---------CPAGQNPNKT----QCVDADECLID 422
+C ++ + + F C G + T QC + DEC +D
Sbjct: 311 IIRCDLTREFECINRNTGVLEQCIPFSKVCDRNDDCADGSDEPGTWTNVQC-NVDECKVD 369
Query: 423 -GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
GSC Q C +T SY C+C G+ L+ D ++C
Sbjct: 370 NGSCSQGCVDTPHSYYCTCDNGFELQDDKRTC 401
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 25/144 (17%)
Query: 48 FKRILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPL 104
+ + G HT +A+++ H +S +L + L + DL P L
Sbjct: 516 VRLVSEGIHTPDGVAVDWIHHKMYWTDTGTNTISVSQLD-GNLRKTLFATDLDEPRALAL 574
Query: 105 D--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
D ++E+AGM+G R PLV I+WP+ L +D +YW D+ L+T
Sbjct: 575 DPTEGFMYWSDWGQPAKIERAGMNGFFREPLVQTGIEWPNGLTLDILGKRIYWVDAKLHT 634
Query: 151 VESVRVDGSHN-------AVLCHP 167
+ SV G+ +L HP
Sbjct: 635 ISSVTTTGADRRQIIQDETLLAHP 658
>gi|443703557|gb|ELU01036.1| hypothetical protein CAPTEDRAFT_219267 [Capitella teleta]
Length = 4831
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 106/307 (34%), Positives = 143/307 (46%), Gaps = 36/307 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C E RC + +C+ CDG C++G DE C C G+ C C P+ W
Sbjct: 3626 CSQREFRC-DNRRCILSDFRCDGINQCTDGSDEAG-CEKTCEEGKRQCPESSFCYPDEWH 3683
Query: 224 CDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DCL DGSDE + C ++QC S +C+P WLCD E DC D TD
Sbjct: 3684 CDGDADCL-DGSDEEDCGDAGVVCGVDELQCGTSAECVPLAWLCDGEKDCRNG--YDETD 3740
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ H C G C + +C+P +CDE C D +DE S C
Sbjct: 3741 TVCNS-HVCVPGYFSCN-NTRCVPFEHICDEHNQCG-----DMSDE------SQCNQPCQ 3787
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAM 399
+E RC +S QCV+++ C+ DC +G DEG C N K C + C G +
Sbjct: 3788 VDEFRC-ASGQCVSMNSVCNLYKDCVDGTDEGEICRNTFKVACTTVD---DCREHEDGTL 3843
Query: 400 ------CFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
C C G + +C D +ECLI G+CDQ CTNT+ SY C C E + ++P
Sbjct: 3844 QCLDGQCVCAEGFEIARATGKCEDKNECLIHGTCDQICTNTNGSYFCMC-EDHFMKPRVN 3902
Query: 452 SCTAVNV 458
+ +A V
Sbjct: 3903 NVSAKQV 3909
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 168/371 (45%), Gaps = 73/371 (19%)
Query: 161 NAVLCHPN-----ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
N LCH +C ++ QC+ S CD DC + DE + C F C
Sbjct: 984 NVTLCHQTTCNDTHKQCKNTGQCIPKSWLCDTDNDCGDWSDERGCNYSICHFDLFHCDNH 1043
Query: 216 KCIPESWKCDGFVDCLEDGSDE---PNTCIHQCF-----NGQVQCALSKKCIPHNWLCDE 267
CI S C+G DCL DG+DE P TC Q + +CIP + CDE
Sbjct: 1044 TCIDRSLLCNGIPDCL-DGTDEINCPVTCDPQTHFLCDSPPPLGNETLPRCIPRSQRCDE 1102
Query: 268 EMDCS--TDDIV------------------------------DNTDE----DWDKFHQCF 291
+ DC +D+IV DN+DE + FH C
Sbjct: 1103 KDDCGDNSDEIVCQKCLANEFTCDNGLCILATLKCDGQNDCIDNSDETECGNVPDFH-CE 1161
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
+CA +KCIP +W CD E DC ++D +DE+ + V C HPN +C
Sbjct: 1162 FPNFKCATEQKCIPRHWRCDGEHDC----LLDGSDEE-------DCVKCDHPNH-KCDKD 1209
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK 410
+C+ ++ C+G+ DC +G DEG C + C + C H+C TP G +C CP + +
Sbjct: 1210 LKCLNYTQLCNGEADCEDGSDEGDLCYFDS-CRSNNCEHECHNTPEGYVCVCPQDKKIDP 1268
Query: 411 T---QCVDADECLIDGSCDQTCTNTH-LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
+ +CV+ C G C+Q C H + + C C G+ L D +CT ++ D+P +
Sbjct: 1269 SDPEKCVELVTCEW-GLCNQHCEEKHDVFHACVCNAGFELIADNYTCTPLS---DDPVYV 1324
Query: 467 IFSSTVDIRRI 477
IFS+ +IRR+
Sbjct: 1325 IFSNRHEIRRL 1335
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 120/269 (44%), Gaps = 40/269 (14%)
Query: 205 CTPGQFSCGM-----GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
C P QF CG+ +CI W+CD +DC DGSDE + +C N Q C K CI
Sbjct: 14 CPPDQFECGIEISAGKRCISLGWRCDQKLDC-PDGSDEADCPKLECDNTQFACHDGKSCI 72
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD + DC +D +DE + +S I + + S
Sbjct: 73 PAGWKCDNDEDC-----IDGSDE-----------SAEYCVSVDNISQGQILQMKTSVSIS 116
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+++DE + VLC PN+ C +S C+ + CD + C G+DEG FC +
Sbjct: 117 FTSNSSDE-------VSGVLCPPNKYHCLNSTLCIKFNLICDDQVHCPMGDDEGLFCRDS 169
Query: 380 ADCENLKCSH-----KCSPTPRGA----MCFCPAGQ--NPNKTQCVDADECLIDGSCDQT 428
C + C C P P + C C G+ N + C D DE L DG CDQ
Sbjct: 170 NPCRSSPCPRDFTDSGCIPAPTNSPFNRFCSCGEGRYFNYSANLCQDLDESLYDGFCDQR 229
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
TN + SY CSC GY D +CTA+N
Sbjct: 230 TTNGNGSYTCSCANGYFGSHDNATCTAIN 258
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/403 (29%), Positives = 153/403 (37%), Gaps = 106/403 (26%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
++C + C+ S C+G DC +G DE + EC GQ C G CIPESW CD
Sbjct: 2695 IKCEHTTACILASWMCNGDDDCWDGSDELNCTDPVHMECAVGQRPCADGVCIPESWWCDN 2754
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DCL D SDE + C C + QC S CIPH+W CD DC+ D +DE +
Sbjct: 2755 SNDCL-DASDEKD-CEVTCGDNTFQCDRSV-CIPHSWFCDNHQDCT-----DGSDEPENC 2806
Query: 287 FHQCFNGQVQCALS----KKCIPHNWLCDEEMDC-------------------------- 316
C + +C + + CIP LCD C
Sbjct: 2807 ITPCTENEFECKATGTSRRHCIPQTALCDGTRQCENGADETPTVGCHPVPCANNEFQCKN 2866
Query: 317 -----------STDDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
D +D TDE DW + C +E +C +QCVA ++ CDGK
Sbjct: 2867 LECIKASFFCDGAPDCLDGTDEPDW---CVASKPECQADEFKCNHIHQCVAQNRTCDGKL 2923
Query: 365 DCSNGEDE---------------------GPFCNNKADCENLK----------------- 386
DC + DE G N K C L
Sbjct: 2924 DCIDQSDESNETCPEVIPCGSADKFQCRNGVCVNRKQLCNGLNECGDASDEDLCDINECE 2983
Query: 387 ------CSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C C P GA C C G + T C D +EC C C NT S+ C
Sbjct: 2984 ISSVRYCQQICEDLPIGAKCSCRPGYALAEDGTSCKDVNECE-SNVCSHFCQNTAGSFHC 3042
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SC G+ L PD ++C D P I+ S+ IR + L+G
Sbjct: 3043 SCALGFILGPDKRTCRGNT--SDVPF-ILVSNRYYIRNVSLDG 3082
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 114/272 (41%), Gaps = 85/272 (31%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ S C+G+ DC +G+DE +A C QF+C +CIP W+CD DC D SD
Sbjct: 3476 KCIPGSLRCNGQEDCPDGQDEQGCDDARCLDNQFTCTNNRCIPLVWRCDHDNDC-GDNSD 3534
Query: 237 EPNTCIHQ-CFNGQVQCALSKKCIPHNWL------------CDEEMDCST---------- 273
EP CI+ C + +C S +CIP +W DE C T
Sbjct: 3535 EPQECINMTCPDQYHKCNSSGRCIPLSWKCDGDYDCGGDDHSDEPASCQTQECESTYFKC 3594
Query: 274 ---------------DDIVDNTDE-----------------------DW--DKFHQCFNG 293
DD DN+DE D+ D +QC +G
Sbjct: 3595 QNTRCIPGRWVCDFDDDCRDNSDEINCEPRNCSQREFRCDNRRCILSDFRCDGINQCTDG 3654
Query: 294 -------------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ QC S C P W CD + DC +D +DE+ V+C
Sbjct: 3655 SDEAGCEKTCEEGKRQCPESSFCYPDEWHCDGDADC-----LDGSDEE---DCGDAGVVC 3706
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+EL+CG+S +CV L+ CDG+ DC NG DE
Sbjct: 3707 GVDELQCGTSAECVPLAWLCDGEKDCRNGYDE 3738
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 114/286 (39%), Gaps = 82/286 (28%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE---------CTPGQFSCG 213
+C + C + ++C++ S+ CDG DC DE G C A+ C +F C
Sbjct: 2604 MCAQGHVHCSTGSRCISTSRLCDGNVDCPGASDEAGCGCRADQFKCISDQRCIDKKFKCD 2663
Query: 214 MGK------------------------------------CIPESWKCDGFVDCLEDGSDE 237
K CI SW C+G DC DGSDE
Sbjct: 2664 FDKDCEDASDEMNCGNTQCGHFGLYANGEEVIKCEHTTACILASWMCNGDDDCW-DGSDE 2722
Query: 238 PNTC--IH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
N +H +C GQ CA CIP +W CD DC +D +DE D C +
Sbjct: 2723 LNCTDPVHMECAVGQRPCA-DGVCIPESWWCDNSNDC-----LDASDEK-DCEVTCGDNT 2775
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCG----S 349
QC S CIPH+W CD DC+ D +DE N + C NE C S
Sbjct: 2776 FQCDRS-VCIPHSWFCDNHQDCT-----DGSDE------PENCITPCTENEFECKATGTS 2823
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPF--------CNNKADCENLKC 387
C+ + CDG C NG DE P NN+ C+NL+C
Sbjct: 2824 RRHCIPQTALCDGTRQCENGADETPTVGCHPVPCANNEFQCKNLEC 2869
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 88/201 (43%), Gaps = 24/201 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGK----CI 218
C +E C S+ +C+ CD DC +G DE C A PG F C + C+
Sbjct: 3377 CSSSEFECASTYKCIPFWWKCDTHDDCGDGSDEPADCPAYHCSMPGLFQCSNAQRAYDCM 3436
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDI 276
+ CDG C D SDE N + C + Q +C KCIP + C+ + DC
Sbjct: 3437 SPTQICDGVAQC-SDASDEVNCTTYTCMDSQFKCTGPEGAKCIPGSLRCNGQEDCP---- 3491
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D DE +C + Q C + +CIP W CD + DC DN+DE +
Sbjct: 3492 -DGQDEQGCDDARCLDNQFTCT-NNRCIPLVWRCDHDNDCG-----DNSDEPQECI---- 3540
Query: 337 AVLCHPNELRCGSSNQCVALS 357
+ C +C SS +C+ LS
Sbjct: 3541 NMTCPDQYHKCNSSGRCIPLS 3561
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 24/189 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIP 219
V+C +EL+CG+S +CV L+ CDG+ DC NG DE CN+ C PG FSC +C+P
Sbjct: 3703 GVVCGVDELQCGTSAECVPLAWLCDGEKDCRNGYDETDTVCNSHVCVPGYFSCNNTRCVP 3762
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD-- 275
CD C D SDE + C C + +CA S +C+ N +C+ DC TD+
Sbjct: 3763 FEHICDEHNQC-GDMSDE-SQCNQPCQVDEFRCA-SGQCVSMNSVCNLYKDCVDGTDEGE 3819
Query: 276 -----------IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC----STDD 320
VD+ E D QC +GQ CA + C+++ +C + D
Sbjct: 3820 ICRNTFKVACTTVDDCREHEDGTLQCLDGQCVCAEGFEIARATGKCEDKNECLIHGTCDQ 3879
Query: 321 IVDNTDEDW 329
I NT+ +
Sbjct: 3880 ICTNTNGSY 3888
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 117/312 (37%), Gaps = 62/312 (19%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
LP PE P D ++ +A M G VTK +QWP+ L ID + ++WC+++ + +E V
Sbjct: 741 LPRPE--PADAKIVRASMDGLQAEIWVTKMLQWPNGLSIDAASNKIFWCEAYQDRIEVVD 798
Query: 156 VDGSHNAV--------LCHPNEL----------------------RCGSSNQCVALSKFC 185
+D + + HP + R G N L+
Sbjct: 799 MDNKDDRTVLLTQSHGIVHPFGIGHLKVESLYYVYWSEFTEGYIKRAGPMN----LTSLA 854
Query: 186 DGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
D D P Q G C S+ C E P + C
Sbjct: 855 DPASVIKLRIDSFPLFALHLHNPQVQIGENGCKQPSYG-----GCSELCLSNPTGTVCSC 909
Query: 246 FNGQVQCALSKKC--IPHNWLCDEEMDCSTDDIV---DNTDEDWDKFHQCFNGQVQCALS 300
+G+ A +K C +P L + CS ++ DNT + QC +G
Sbjct: 910 SDGKQLNADNKTCSAVPPGQLTPAPLKCSANEFACVNDNTSCPLESMFQCASG------- 962
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
KCI +W+CD E+DC + ED + H C+ +C ++ QC+ S C
Sbjct: 963 -KCILKSWVCDHEIDCP-------SGEDENVTLCHQTT-CNDTHKQCKNTGQCIPKSWLC 1013
Query: 361 DGKPDCSNGEDE 372
D DC + DE
Sbjct: 1014 DTDNDCGDWSDE 1025
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 112/278 (40%), Gaps = 92/278 (33%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCD 266
F C GKCI +SW CD +DC G DE T HQ C + QC + +CIP +WLCD
Sbjct: 956 MFQCASGKCILKSWVCDHEIDC-PSGEDENVTLCHQTTCNDTHKQCKNTGQCIPKSWLCD 1014
Query: 267 EEMDCSTDDIVDNTDED--------WDKFH-----------------QCFNG--QVQCAL 299
+ DC D +DE +D FH C +G ++ C +
Sbjct: 1015 TDNDCG-----DWSDERGCNYSICHFDLFHCDNHTCIDRSLLCNGIPDCLDGTDEINCPV 1069
Query: 300 S--------------------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ +CIP + CDE+ DC DN+DE ++
Sbjct: 1070 TCDPQTHFLCDSPPPLGNETLPRCIPRSQRCDEKDDCG-----DNSDE----------IV 1114
Query: 340 CH---PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CE--NLKCSHKCS 392
C NE C + C+ + CDG+ DC + DE C N D CE N KC+ +
Sbjct: 1115 CQKCLANEFTC-DNGLCILATLKCDGQNDCIDNSDETE-CGNVPDFHCEFPNFKCATEQK 1172
Query: 393 PTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
PR +C +CL+DGS ++ C
Sbjct: 1173 CIPR-------------HWRCDGEHDCLLDGSDEEDCV 1197
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 119/308 (38%), Gaps = 57/308 (18%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR--------- 155
D+++E+ +G +R +V ++ L + Q+ LYW D L +V
Sbjct: 2432 DDKVERCNFNGSDRVVIVARSAHHIFGLAL--FQNDLYWTDWLLRSVIRANKFTGQDLKY 2489
Query: 156 ------------VDGSHNAVLCHPNELRCGSSNQCVALSKFCD----GKPDCS------- 192
V + NA+ C E C N CD G CS
Sbjct: 2490 MKRGIGHQPMGIVAVATNAMSCM--EHACNKQNGNGGCHHVCDTDEHGDVTCSCNPGFSL 2547
Query: 193 -NGEDEGPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFN 247
+ + +C N C F C MG CIP CDG C + ++ C ++ C
Sbjct: 2548 ADPTNHTSYCQPANITCPSHLFQCYMGGCIPYELTCDGIQSCPDKSDEDVYYCENRMCAQ 2607
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
G V C+ +CI + LCD +DC +DE C Q +C ++CI
Sbjct: 2608 GHVHCSTGSRCISTSRLCDGNVDCP-----GASDE---AGCGCRADQFKCISDQRCIDKK 2659
Query: 308 WLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKP 364
+ CD + DC D +DE + H + + E ++C + C+ S C+G
Sbjct: 2660 FKCDFDKDCE-----DASDEMNCGNTQCGHFGLYANGEEVIKCEHTTACILASWMCNGDD 2714
Query: 365 DCSNGEDE 372
DC +G DE
Sbjct: 2715 DCWDGSDE 2722
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 111/295 (37%), Gaps = 49/295 (16%)
Query: 95 DLPAPEIFPLDERLEKAG---MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D +F D RL+ + G ++ N+ P + +D +YW D +V
Sbjct: 3234 DFITDHVFWADARLDYIAFSKLDGTQVRYVIQGNL--PHIFAVTVYEDYIYWTDWENKSV 3291
Query: 152 ESVRVDGSHN-----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
E R N ++ P +L+ + + K P NG C+
Sbjct: 3292 ERARKFTGQNHTRIMTMVHRPMDLQVFHPFRQLHAVKKGQTNPCAGNGT---------CS 3342
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDG--SDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C+ C E S + +CI C + + +CA + KCIP W
Sbjct: 3343 DSML------CLIRPGGTSRVCACPEKHYPSTDKQSCISNCSSSEFECASTYKCIPFWWK 3396
Query: 265 CDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKK---CIPHNWLCDEEMDCSTD 319
CD DC D +DE D +H G QC+ +++ C+ +CD CS
Sbjct: 3397 CDTHDDCG-----DGSDEPADCPAYHCSMPGLFQCSNAQRAYDCMSPTQICDGVAQCS-- 3449
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDE 372
D +DE + C ++ +C +C+ S C+G+ DC +G+DE
Sbjct: 3450 ---DASDE-----VNCTTYTCMDSQFKCTGPEGAKCIPGSLRCNGQEDCPDGQDE 3496
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E A + G +R+ LV+ + WPSS+V+D + LYW D+ T+ +V +DG+ +
Sbjct: 4088 IESAWLDGSHRTVLVSSRLSWPSSVVVDVPNNHLYWADAKRKTINTVALDGTRRQTV 4144
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ + GM G N S ++TK + WP+ L +D+ D ++W D+ L+ + ++DG+ +
Sbjct: 3206 IGRLGMDGSNYSIIITKQLVMWPNGLAVDFITDHVFWADARLDYIAFSKLDGTQVRYVIQ 3265
Query: 167 PN 168
N
Sbjct: 3266 GN 3267
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 15/138 (10%)
Query: 42 EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEI 101
E W L+ T L ++ RN +++ + ++N+ P+
Sbjct: 345 EQWTVALNFPLDSTQGLTYDWLARNWYFTDEKRERIFVCSSYTGICLTIINTRLKKLPKA 404
Query: 102 FPLD--------------ERLEKAGMHGENRSPLVTKN-IQWPSSLVIDYNQDILYWCDS 146
+D +LE+A + G +R LV+ + PSSL +DY + +YW DS
Sbjct: 405 ITVDPTKNFIFFTVWGDTAKLERAQLDGTHRRVLVSSSQFVHPSSLTLDYANEHVYWSDS 464
Query: 147 HLNTVESVRVDGSHNAVL 164
+L ++ V G+ ++
Sbjct: 465 YLGSIFRVDYSGNRRKLI 482
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQFSCGMGKCIPE 220
C +E +C +QCVA ++ CDGK DC + DE E P +F C G C+
Sbjct: 2899 CQADEFKCNHIHQCVAQNRTCDGKLDCIDQSDESNETCPEVIPCGSADKFQCRNGVCVNR 2958
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQC 245
C+G +C D SDE I++C
Sbjct: 2959 KQLCNGLNEC-GDASDEDLCDINEC 2982
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++G + +VT IQ P+ L IDY+ + LYW D+ + VE +GS V+
Sbjct: 2397 VNGRDFKAIVTTRIQTPNGLTIDYSANKLYWSDARDDKVERCNFNGSDRVVI 2448
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L R+ +A + G R L+ +I P+ L +D + +++WCD LN +E V + N
Sbjct: 2075 LQPRIHRARLDGSGRETLIETDIVNPTGLAVD-EEGVVFWCDQGLNKIERVELTPRVNRT 2133
Query: 164 L 164
+
Sbjct: 2134 V 2134
>gi|390179021|ref|XP_003736784.1| GA16002, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859681|gb|EIM52857.1| GA16002, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 849
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 152/368 (41%), Gaps = 67/368 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + +C S C+ LS CD DC +G DE CNA C +F+C G CI WK
Sbjct: 96 CSPEQFQCKSGEGVCIPLSWMCDQNKDCDDGSDEAQ-CNATCRSDEFTCASGDCIQSRWK 154
Query: 224 CDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNT 280
CDG DC+ DGSDE N +C C + CI W+CD + DC +D+ V
Sbjct: 155 CDGDHDCV-DGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCKDHSDEKVSYG 212
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ C + C C+ W+CD ++DC D D D N V C
Sbjct: 213 ENPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGD-------DEDPANCQN-VTC 264
Query: 341 HPNELRCG-------------------------------------------SSNQCVALS 357
P++ +CG QC+AL
Sbjct: 265 RPDQFQCGDRSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALD 324
Query: 358 KFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQC 413
K C+ + DC +GEDE G N+ +N C H+C G C C G + +K C
Sbjct: 325 KVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTC 384
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTV 472
VD DEC G+C Q C N + C C GY P + C A + AS++ +
Sbjct: 385 VDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASLLLARRH 440
Query: 473 DIRRIHLN 480
DIR+I L+
Sbjct: 441 DIRKIALD 448
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 144/355 (40%), Gaps = 70/355 (19%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMG 215
G+ N +C P E+ C + QC+ CDG DC + DE C+P QF C G G
Sbjct: 49 GNGNFSMCQPYEVMCKNMEQCIPRMWLCDGDFDCRDMSDEQDCTRKTCSPEQFQCKSGEG 108
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP SW CD DC +DGSDE C C + + CA S CI W CD + DC
Sbjct: 109 VCIPLSWMCDQNKDC-DDGSDEAQ-CNATCRSDEFTCA-SGDCIQSRWKCDGDHDC---- 161
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
VD +DE + +C C + CI W+CD + DC D++DE Y
Sbjct: 162 -VDGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDEKV-SYGE 213
Query: 335 HNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---------------- 375
+ +L C P+E C C+ + CDG DC G+DE P
Sbjct: 214 NPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPANCQNVTCRPDQFQCGD 273
Query: 376 ---------CNNKADCENLKCSHKC--SPTPR-----------GAMCF-----------C 402
CN + DC + C + PR G C C
Sbjct: 274 RSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALDKVCNKRKDC 333
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
P G++ +C + +G C C + + Y C C +GY L D ++C ++
Sbjct: 334 PDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTCVDID 388
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 571 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 630
Query: 167 PNEL 170
E
Sbjct: 631 STEY 634
>gi|390179019|ref|XP_003736783.1| GA16002, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859680|gb|EIM52856.1| GA16002, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 883
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/368 (30%), Positives = 152/368 (41%), Gaps = 67/368 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + +C S C+ LS CD DC +G DE CNA C +F+C G CI WK
Sbjct: 96 CSPEQFQCKSGEGVCIPLSWMCDQNKDCDDGSDEAQ-CNATCRSDEFTCASGDCIQSRWK 154
Query: 224 CDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNT 280
CDG DC+ DGSDE N +C C + CI W+CD + DC +D+ V
Sbjct: 155 CDGDHDCV-DGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCKDHSDEKVSYG 212
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ C + C C+ W+CD ++DC D D D N V C
Sbjct: 213 ENPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGD-------DEDPANCQN-VTC 264
Query: 341 HPNELRCG-------------------------------------------SSNQCVALS 357
P++ +CG QC+AL
Sbjct: 265 RPDQFQCGDRSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALD 324
Query: 358 KFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQC 413
K C+ + DC +GEDE G N+ +N C H+C G C C G + +K C
Sbjct: 325 KVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTC 384
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTV 472
VD DEC G+C Q C N + C C GY P + C A + AS++ +
Sbjct: 385 VDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASLLLARRH 440
Query: 473 DIRRIHLN 480
DIR+I L+
Sbjct: 441 DIRKIALD 448
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/355 (29%), Positives = 144/355 (40%), Gaps = 70/355 (19%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMG 215
G+ N +C P E+ C + QC+ CDG DC + DE C+P QF C G G
Sbjct: 49 GNGNFSMCQPYEVMCKNMEQCIPRMWLCDGDFDCRDMSDEQDCTRKTCSPEQFQCKSGEG 108
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP SW CD DC +DGSDE C C + + CA S CI W CD + DC
Sbjct: 109 VCIPLSWMCDQNKDC-DDGSDEAQ-CNATCRSDEFTCA-SGDCIQSRWKCDGDHDC---- 161
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
VD +DE + +C C + CI W+CD + DC D++DE Y
Sbjct: 162 -VDGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDEKV-SYGE 213
Query: 335 HNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---------------- 375
+ +L C P+E C C+ + CDG DC G+DE P
Sbjct: 214 NPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPANCQNVTCRPDQFQCGD 273
Query: 376 ---------CNNKADCENLKCSHKC--SPTPR-----------GAMCF-----------C 402
CN + DC + C + PR G C C
Sbjct: 274 RSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALDKVCNKRKDC 333
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
P G++ +C + +G C C + + Y C C +GY L D ++C ++
Sbjct: 334 PDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTCVDID 388
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 571 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 630
Query: 167 PNEL 170
E
Sbjct: 631 STEY 634
>gi|431898654|gb|ELK07034.1| Very low-density lipoprotein receptor [Pteropus alecto]
Length = 874
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/367 (32%), Positives = 165/367 (44%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C N + CG+ S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 113 CRINSISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSSDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S IP +W CD++ DCS D +DE
Sbjct: 173 CNGQDDC-NDGSDELDCAPPSCGAHEFQCSSSSC-IPISWKCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHFKCPASEIQCG-SGECIHRKWRCDGDPDCK-----DGSDE-----INCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCQPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFLCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC+ N CSH C G C C AG + ++
Sbjct: 334 VSKVCNQEQDCKDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 154/375 (41%), Gaps = 91/375 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C ++ C+ L CDG DC++G DE C F C G+C+P W+C
Sbjct: 33 CESSQFQC-TNGHCIPLLWKCDGDEDCADGSDEMNCVKKTCAASDFVCNNGQCVPSRWQC 91
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDN-- 279
DG DC EDGSDE P C + C + C A S +CIP +W CD E DC + + +N
Sbjct: 92 DGDPDC-EDGSDESPEQCYMRTCRINSISCGAHSTQCIPVSWRCDGENDCDSGEDEENCG 150
Query: 280 -----TDEDWDKFHQCF------NGQVQC---ALSKKCIPHN-----------------W 308
+DE +C NGQ C + C P + W
Sbjct: 151 NITCSSDEFTCSSGRCISRNFVCNGQDDCNDGSDELDCAPPSCGAHEFQCSSSSCIPISW 210
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDC 366
CD++ DCS D +DE ++ + C +E++CGS +C+ CDG PDC
Sbjct: 211 KCDDDADCS-----DQSDESLEQCGRQPVIHFKCPASEIQCGSG-ECIHRKWRCDGDPDC 264
Query: 367 SNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAGQ 406
+G DE C ++ +CE+ C H +C+ C P
Sbjct: 265 KDGSDEINCPSRTCQPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKF 324
Query: 407 NPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCTE 442
+C+D +ECL+ +G C C + + Y C C
Sbjct: 325 LCRSGECIDVSKVCNQEQDCKDWSDEPLKECHVNECLVNNGGCSHICKDLVIGYECDCAA 384
Query: 443 GYTLRPDGKSCTAVN 457
G+ L D K+C ++
Sbjct: 385 GFEL-IDRKTCGDID 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 86/174 (49%), Gaps = 21/174 (12%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
NA+C QF C G CIP WKCDG DC DGSDE N C C + +C+P
Sbjct: 30 NAKCESSQFQCTNGHCIPLLWKCDGDEDC-ADGSDEMNCVKKTCAASDFVCN-NGQCVPS 87
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST 318
W CD + DC D +DE ++ C + C A S +CIP +W CD E DC +
Sbjct: 88 RWQCDGDPDCE-----DGSDESPEQCYMRTCRINSISCGAHSTQCIPVSWRCDGENDCDS 142
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N + C +E C SS +C++ + C+G+ DC++G DE
Sbjct: 143 GEDEENC----------GNITCSSDEFTC-SSGRCISRNFVCNGQDDCNDGSDE 185
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 41 DEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA 98
D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 500 DDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DLRE 558
Query: 99 PEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
P +D ++EKAGM+G +R PLVT IQWP+ + +D + LYW
Sbjct: 559 PASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTMEIQWPNGITLDLIKSRLYWL 618
Query: 145 DSHLNTVESVRVDGSHNAVLCHPNEL 170
DS L+ + SV ++G ++ E
Sbjct: 619 DSKLHMLSSVDLNGQDRRIVLKSLEF 644
>gi|357627883|gb|EHJ77414.1| hypothetical protein KGM_05660 [Danaus plexippus]
Length = 1825
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/329 (31%), Positives = 137/329 (41%), Gaps = 44/329 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P+ RC S +CV C G P C++G DE +C PG F C + + C+ S
Sbjct: 13 CGPDSFRC-VSGECVPAVSRCSGSPQCADGSDER---GCDCAPGTFRCALSETCLQTSLY 68
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC EDGSDEP C S IPH +
Sbjct: 69 CDGDADC-EDGSDEPPGCSAPVTTSTASPVGS--IIPHT---------------SHNSSF 110
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF---------- 333
+ G + C +CIP +CD C +D D D D
Sbjct: 111 ASELCAGEPGSLYC--RGRCIPAALVCDGRDHC--EDQPDGPGSDEDPVMCSSFAASFGS 166
Query: 334 ---SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
+ + C E RCG+ CV CDG+ C + DE N+ N +C H
Sbjct: 167 SAEAAVSAGCVRGEWRCGN-GACVPRRALCDGRDSCGDFTDEWHCNINECLVLNGECGHN 225
Query: 391 CSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C+ P G C+C AG + C D DEC D CD C NT S+VC+C+ GY L DG
Sbjct: 226 CTDLPVGRACWCRAGWRLSGRGCTDVDECREDRPCDHGCRNTPGSFVCTCSRGYRLMEDG 285
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
SC V+ D AS+IF++ IRR +
Sbjct: 286 SSCMPVS---DIKASLIFTNRYYIRRTSI 311
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 103/216 (47%), Gaps = 22/216 (10%)
Query: 161 NAVLCHPNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+A C + +C ++ + CV C+G+ DC+ GEDE C P F CG G
Sbjct: 717 DAFTCLAAQFKCPAAGRAPARCVPSEARCNGEKDCAGGEDEKDCPPVSCPPHTFLCGSGA 776
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
C+P+ W CDG DC DGSDE QC G+ +CA S +C+P WLCD E DC +
Sbjct: 777 CVPQVWVCDGDADC-SDGSDERGCSSRQCARGEFRCA-SGRCVPREWLCDGEADCPALE- 833
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ D C +CA +CIP W CD E DC+ D +DE
Sbjct: 834 ---DEARCDAHAACEPTYFRCA-DMRCIPGRWRCDFEEDCA-----DGSDER-----GCT 879
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ + C G DC+ GEDE
Sbjct: 880 PRNCSESEFRC-DNGECIRGALRCSGAADCAGGEDE 914
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 110/261 (42%), Gaps = 61/261 (23%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGM 214
DG + C C SS +C+ CD + DC +G DE C A C+PGQF C
Sbjct: 632 ADGRSCSPNCTSAHFVCRSSLKCIPFWWRCDTQDDCGDGSDEPASCPAFRCSPGQFQCAN 691
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCF-------------------NGQVQ 251
+C+ + CDG C DGSDE + TC+ F NG+
Sbjct: 692 SRCVHPAHICDGVQQC-GDGSDERDCDAFTCLAAQFKCPAAGRAPARCVPSEARCNGEKD 750
Query: 252 CA--------------------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
CA S C+P W+CD + DCS D +DE QC
Sbjct: 751 CAGGEDEKDCPPVSCPPHTFLCGSGACVPQVWVCDGDADCS-----DGSDERGCSSRQCA 805
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
G+ +CA S +C+P WLCD E DC ED + +H A C P RC +
Sbjct: 806 RGEFRCA-SGRCVPREWLCDGEADCP-------ALEDEARCDAHAA--CEPTYFRC-ADM 854
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CD + DC++G DE
Sbjct: 855 RCIPGRWRCDFEEDCADGSDE 875
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 133/332 (40%), Gaps = 38/332 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C P RC + +C+ CD + DC++G DE C+ +F C G+CI +
Sbjct: 842 AACEPTYFRC-ADMRCIPGRWRCDFEEDCADGSDERGCTPRNCSESEFRCDNGECIRGAL 900
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+C G DC G ++ C C C S++C+ + W CD E+DC+ DN
Sbjct: 901 RCSGAADCA--GGEDERACAAACPTSAKLCTHSQECLQNEWWCDGEVDCADGSDEDNCTS 958
Query: 283 DWDKFHQCFNGQVQCALSKKC---------IPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+ C +C P W CD DC+ D +DE+
Sbjct: 959 SATTMATHAAATLDCGTRLRCGGVGGGGWCAPSAWRCDGRRDCA-----DGSDEEAGMC- 1012
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+C P +RCG N C+ CDG DC++G DE P +++ S S
Sbjct: 1013 --RHTVCPPPMVRCGE-NTCIPPHLLCDGFRDCADGSDENPLLCSRSR------SRSESL 1063
Query: 394 TPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHL-SYVCSCTEGYTLR--PD 449
PR C G+ P C C +C Q C H ++ C C GY D
Sbjct: 1064 CPRDQQ-LCGDGRCAPANAPCPSESGCTWR-TCSQLCLPKHAHNHTCKCVAGYKQHQLAD 1121
Query: 450 GK-SCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G +C A E A ++ +S+ ++ + L+
Sbjct: 1122 GTFTCEATG----EKAKVLVASSGALKLLELH 1149
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 97/214 (45%), Gaps = 27/214 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C P+ CGS CV CDG DCS+G DE + +C G+F C G+C+P W
Sbjct: 763 VSCPPHTFLCGS-GACVPQVWVCDGDADCSDGSDERGCSSRQCARGEFRCASGRCVPREW 821
Query: 223 KCDGFVDC--LEDGS--DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CDG DC LED + D C F +CA +CIP W CD E DC+ D
Sbjct: 822 LCDGEADCPALEDEARCDAHAACEPTYF----RCA-DMRCIPGRWRCDFEEDCA-----D 871
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE C + +C + +CI C DC+ + DE A
Sbjct: 872 GSDERGCTPRNCSESEFRCD-NGECIRGALRCSGAADCAGGE-----DE------RACAA 919
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C S +C+ +CDG+ DC++G DE
Sbjct: 920 ACPTSAKLCTHSQECLQNEWWCDGEVDCADGSDE 953
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 95/216 (43%), Gaps = 34/216 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESW 222
LC + L G++ C F G +G C+ CT F C KCIP W
Sbjct: 608 LCLLSPLEGGATAHCACPEHFVLGA--------DGRSCSPNCTSAHFVCRSSLKCIPFWW 659
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CD DC DGSDEP +C +C GQ QCA S +C+ +CD C D +D
Sbjct: 660 RCDTQDDC-GDGSDEPASCPAFRCSPGQFQCANS-RCVHPAHICDGVQQCG-----DGSD 712
Query: 282 E-DWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
E D D F C Q +C + +C+P C+ E DC+ + D D
Sbjct: 713 ERDCDAF-TCLAAQFKCPAAGRAPARCVPSEARCNGEKDCAGGE--DEKD--------CP 761
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C P+ CG S CV CDG DCS+G DE
Sbjct: 762 PVSCPPHTFLCG-SGACVPQVWVCDGDADCSDGSDE 796
>gi|198429581|ref|XP_002120439.1| PREDICTED: similar to rCG59548 [Ciona intestinalis]
Length = 1996
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 163/399 (40%), Gaps = 88/399 (22%)
Query: 145 DSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA 203
D H N+ E + + N C C +S+ C+ CDG+ DC GEDE P C
Sbjct: 898 DCHDNSDEKIEICAKKN---CSDGWFLCSNSSVCILSRWVCDGESDCPGGEDETPEVCRG 954
Query: 204 E-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPH 261
C GQF C G CIP+ W+CD DC +G DE + C + C G LS +CI
Sbjct: 955 RSCPSGQFLCPSGLCIPDIWRCDLDDDC-HNGFDESDNCTYASCRTGVEFSCLSGRCIAL 1013
Query: 262 NWLCDEEMDCSTDDIVDNTDED-------WDKFHQCFNGQVQCALS---KKCIPHNWLCD 311
W CD E DC D +DE+ +C ++QC+ +C+P W CD
Sbjct: 1014 EWACDGEDDCG-----DGSDEEDCSATTTPSTATKCAENEMQCSNETSLARCMPSRWRCD 1068
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-------SSNQCVALSKFCDGKP 364
+ DC D +DE C P+ RCG S+++C+ + CDG
Sbjct: 1069 GDEDCP-----DGSDE----------AGCPPSIHRCGYGLYLCNSTSKCILEAWVCDGAD 1113
Query: 365 DCSNGEDEG-----------------------PFCNNKAD------------------CE 383
DC +G DE C NK D C
Sbjct: 1114 DCYDGSDEANCDCPQNITSKYQQIRCITVIGKSDCVNKCDHNVDCISGQDELNCNHGVCA 1173
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
N CSH C+PT G C CP G+ + + C D D C G+C C T +Y CSC
Sbjct: 1174 NSGCSHSCTPTNTGFECSCPKGKELSSDHATCQDIDYCRHRGTCAHICHTTPRAYHCSCH 1233
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ + + + + P P IIFS+ ++ + LN
Sbjct: 1234 KNWKIDHYDVTKCVYDKPA-PPPFIIFSNKRSLKYMELN 1271
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 27/238 (11%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C+ W+CD ++DC D +DE+ C + CA +C+ + C+ MDC+
Sbjct: 51 CVLDEWVCDGDIDCE-----DGSDEENCDHRDCGPDSLSCA--GRCVSYGLACNGAMDCT 103
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
N ++ ++ + + +++ CVA + CDG PDC + DE C
Sbjct: 104 ------NGADEAERICNTGNTCPYFGSSCLTNTSICVAYQQLCDGNPDCPDRSDESTDCE 157
Query: 378 NKAD--------CENLKCSHKCSPTPRGA-MCFCPAGQN-PNKTQCVDADECLIDGSCDQ 427
+ C+ L C H C+ P G C+CP G N T+C A+ C + C Q
Sbjct: 158 ELLEPGYTGFRLCDALSCEHACTFLPEGLPTCYCPPGSILYNDTKCKPANICNLTKPCSQ 217
Query: 428 TCTNTH-LSYVCSCTEGYTLRPDGKSCTAV---NVPQDEPASIIFSSTVDIRRIHLNG 481
TC T + CSC + + + P S + ++ Q +I +S I+ ++ G
Sbjct: 218 TCVQTSGWEFTCSCMDSFFINPHNSSHCLIEEGSIFQSSEPYLIAASDQQIQSYNMEG 275
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 129/335 (38%), Gaps = 56/335 (16%)
Query: 126 IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL---CHPNELRCGSS------- 175
+Q V DY ++Y + N E V + VL R G S
Sbjct: 773 LQGRYLFVADYRSGLIYRYNLTSNRSEPVILHREKPPVLQVIVFNPLFRAGHSACSEAMC 832
Query: 176 -NQCVALSKFCDGKPDCSNGE----------DEGPFCNA-ECTPGQFSCGMGKCIPESWK 223
+ CV++ + K C NG D+ + C QF C G CI + W
Sbjct: 833 TDLCVSIPTYPHYKCLCPNGASLTADNHTCTDKANYTTVPSCAEQQFQCDNGICIVKKWV 892
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC ++ ++ C + C +G C+ S CI W+CD E DC + D T E
Sbjct: 893 CDGDNDCHDNSDEKIEICAKKNCSDGWFLCSNSSVCILSRWVCDGESDCPGGE--DETPE 950
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ C +GQ C S CIP W CD + DC D +D C
Sbjct: 951 VC-RGRSCPSGQFLCP-SGLCIPDIWRCDLDDDCHNG--FDESDN------------CTY 994
Query: 343 NELRCGS-----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH---KCSPT 394
R G S +C+AL CDG+ DC +G DE KC+ +CS
Sbjct: 995 ASCRTGVEFSCLSGRCIALEWACDGEDDCGDGSDEEDCSATTTPSTATKCAENEMQCSNE 1054
Query: 395 PRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTC 429
A C P++ +C D DE DGS + C
Sbjct: 1055 TSLARCM------PSRWRC-DGDEDCPDGSDEAGC 1082
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 51/115 (44%), Gaps = 17/115 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
CV CDG DC +G DE + +C P SC G+C+ C+G +DC +G+DE
Sbjct: 51 CVLDEWVCDGDIDCEDGSDEENCDHRDCGPDSLSCA-GRCVSYGLACNGAMDC-TNGADE 108
Query: 238 P-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
NTC + G + C+ + LCD DC D +DE D
Sbjct: 109 AERICNTGNTCP---YFGSSCLTNTSICVAYQQLCDGNPDCP-----DRSDESTD 155
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E + M G +R L T +I WP+ + +D +D++Y+ ++ + +E+++++G
Sbjct: 689 KIETSWMDGSHREILYTGSDILWPNGITVDTLRDVIYYTEAFYDKIEAIQING 741
>gi|125827065|ref|XP_001337289.1| PREDICTED: hypothetical protein LOC796880 [Danio rerio]
Length = 3496
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 140/309 (45%), Gaps = 37/309 (11%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
+C + +CV + CDG+ DC +G DE C+ +F C G+C+ S +CDG+ DC
Sbjct: 2399 QCDNKTRCVPETFLCDGEKDCVDGTDEANCVVEPCSGDRFQCSNGQCVALSLRCDGYADC 2458
Query: 231 L----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
E G +P C +C + +C+ WLCD + DCS D +DE K
Sbjct: 2459 RDHTDEKGCPQPPHCPL-----DHRCPHTHECLLKEWLCDGDKDCS-----DGSDERNCK 2508
Query: 287 FH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+C Q CA +CI W CD DC D +DE C +
Sbjct: 2509 ATPLKCGEFQWSCASRTQCIAKTWRCDGMKDCQ-----DESDES-----GCGQTKCPTHL 2558
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NNKADCENLKCSHKCSPTPRGAMCFC 402
+CG S +C+ C+ DC++G DEG C NN + + C H C TP GA C C
Sbjct: 2559 FQCG-SGECMDPDLVCNKASDCADGSDEGVGCLKNNCSSPGSPSCQHYCINTPHGARCGC 2617
Query: 403 PAG--QNPNKTQCVDADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
G + + CVD DEC + +C C N SY+C C + L PDG SC
Sbjct: 2618 KTGFKLHSDGLSCVDIDECKEIQPAACSHKCFNRLGSYICQCHPEFLLEPDGHSCKTA-- 2675
Query: 459 PQDEPASII 467
DEP+ ++
Sbjct: 2676 --DEPSLLV 2682
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 181/450 (40%), Gaps = 79/450 (17%)
Query: 11 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLC 70
+C +CIP N+LCD E DC VD TDE Y +++ L R+ LC
Sbjct: 1932 RCDNKTRCIPENFLCDGETDC-----VDGTDESDCGYPTKVVKCESPSVL---CRDGLLC 1983
Query: 71 FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPS 130
V L C D + +D E F D ++R V K+
Sbjct: 1984 ------VPPTSL-CDGKKDCPDGYD----ETFCFDRCPNSGDFLCKDRRKCVDKD----- 2027
Query: 131 SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 190
LV D D H ++ + + + C C QCV + CDG+ D
Sbjct: 2028 -LVCDGRSHCTDGSDEHGCPTKAAE-NSNSGPLKCRVGSKPCNDGRQCVLHTHVCDGEKD 2085
Query: 191 CSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
C +G DE C C QF C G+ CI + CDG C +D SDE N C + + +
Sbjct: 2086 CDDGSDE-QGCPNRCKADQFRCAHGRMCIDKKQVCDGTPQC-QDRSDELN-CFTRSHDCK 2142
Query: 250 VQCALSKKCIPHNWLCDEEMDC--STDD-----IVDNTDEDWDKFHQCFNGQVQCALSKK 302
QC +CIP ++LCD E DC +TD+ I D ++ D K C + + C + K
Sbjct: 2143 HQCDNKTRCIPESFLCDGEKDCVDATDEANCPSIPDASNADPLKTLGCRSPSMFCKETSK 2202
Query: 303 CIPHNWLCDEEMDCSTDD-----IVDNTDEDW-----DKYFSHNAVLCHPNE-------- 344
C+P + LCD ++DC + I +D D + H AV+C
Sbjct: 2203 CMPESQLCDGKVDCPSGADEQFCIYSCSDPDHFLCKDKRKCVHKAVVCDGYSHCADGSDE 2262
Query: 345 -------LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
L+C C+ + CDGKPDC +G DE DC S R
Sbjct: 2263 YQCPTCALQCDQKTVCLTKQQRCDGKPDCRDGSDE-------KDCYTGGVIASTSLPLR- 2314
Query: 398 AMCFCPAGQNPNKTQCVDADEC-LIDGSCD 426
CP G P C+D EC L+D CD
Sbjct: 2315 ----CPLGSKP----CMDGKECVLLDHLCD 2336
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 101/219 (46%), Gaps = 28/219 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESW 222
+C C ++ C+ ++ CDG+ DC +G DE + PG F C KCI +
Sbjct: 1339 VCRSPSRLCPVTSLCITQTQICDGRIDCPDGSDEVSCIDVCSKPGHFLCKDRRKCIEGNL 1398
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CDG DCL+D SDE + I C G C + C+P + LCD + DC
Sbjct: 1399 VCDGHSDCLDD-SDELDCSIPAKTTTRPALACRVGSKPCKDGRGCVPQSHLCDGDEDCK- 1456
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ D HQC GQ QC +CI N +CD C +DN+DE +
Sbjct: 1457 ----DGSDEE-DCGHQCQEGQFQCVSGGRCIKMNQVCDGTPQC-----LDNSDEAGCRKP 1506
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S + LRC + CV + C+G DC +G DE
Sbjct: 1507 SRSC------SLRCDWDHHCVPEAFICNGIRDCRDGTDE 1539
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 102/217 (47%), Gaps = 36/217 (16%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNA----ECTPGQFSCGMGK-CI 218
L+C C+ + CDGKPDC +G DE G + C G C GK C+
Sbjct: 2270 LQCDQKTVCLTKQQRCDGKPDCRDGSDEKDCYTGGVIASTSLPLRCPLGSKPCMDGKECV 2329
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CDG DC +DGSDE TC +C GQ QC+ +KCI ++CD C
Sbjct: 2330 LLDHLCDGEKDC-KDGSDE-RTCERKCKKGQFQCSHGRKCIDMKFVCDGTPQCQDRSDEA 2387
Query: 279 NTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
N + D+ HQC N +C+P +LCD E DC VD TDE N
Sbjct: 2388 NCMKLSDECRHQCDN-------KTRCVPETFLCDGEKDC-----VDGTDE-------ANC 2428
Query: 338 VL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V+ C + +C S+ QCVALS CDG DC + DE
Sbjct: 2429 VVEPCSGDRFQC-SNGQCVALSLRCDGYADCRDHTDE 2464
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 119/284 (41%), Gaps = 45/284 (15%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPE 220
++ C C +CV S CDG+ DC +G DE C+ C GQF C G KCI
Sbjct: 1845 SLRCRVGSKPCRDGRECVLHSHVCDGESDCKDGSDEID-CDFNCEAGQFQCAHGRKCIDA 1903
Query: 221 SWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CDG C +D SDE + +C H+C N +CIP N+LCD E DC
Sbjct: 1904 KLVCDGKPQC-QDFSDEKDCFTRSKSCSHRCDN-------KTRCIPENFLCDGETDC--- 1952
Query: 275 DIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
VD TDE K +C + V C C+P LCD + DC + +D
Sbjct: 1953 --VDGTDESDCGYPTKVVKCESPSVLCRDGLLCVPPTSLCDGKKDCP---------DGYD 2001
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN---LKC 387
+ F + + + C +CV CDG+ C++G DE A+ N LKC
Sbjct: 2002 ETFCFDRCP-NSGDFLCKDRRKCVDKDLVCDGRSHCTDGSDEHGCPTKAAENSNSGPLKC 2060
Query: 388 SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
P G C T D ++ DGS +Q C N
Sbjct: 2061 RVGSKPCNDGRQCVL-------HTHVCDGEKDCDDGSDEQGCPN 2097
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 97/225 (43%), Gaps = 31/225 (13%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCG 213
V P C +C+ + CDG DC + DE C G C
Sbjct: 1378 VCSKPGHFLCKDRRKCIEGNLVCDGHSDCLDDSDELDCSIPAKTTTRPALACRVGSKPCK 1437
Query: 214 MGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G+ C+P+S CDG DC +DGSDE + C HQC GQ QC +CI N +CD C
Sbjct: 1438 DGRGCVPQSHLCDGDEDC-KDGSDEED-CGHQCQEGQFQCVSGGRCIKMNQVCDGTPQC- 1494
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DN+DE C C+L C+P ++C+ DC D TDED
Sbjct: 1495 ----LDNSDE-----AGCRKPSRSCSLRCDWDHHCVPEAFICNGIRDCR-----DGTDED 1540
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ C + C + CV+ ++ CDG+ DC +G DE
Sbjct: 1541 NCAASRPDQTSCESPSVLCPDMSVCVSQAQLCDGRRDCPDGSDEA 1585
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 152/392 (38%), Gaps = 77/392 (19%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
HQC GQ QC +CI N +CD C +DN+DE + R + +L ++
Sbjct: 1466 HQCQEGQFQCVSGGRCIKMNQVCDGTPQC-----LDNSDEAGCRKPSR----SCSLRCDW 1516
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
+H FI C I D + D D+
Sbjct: 1517 DHHCVPEAFI-----------CNGIRDCRDGTDEDNCAASRPDQ---------------- 1549
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR--VDGSHNA----VLCHPNELRCGSSN 176
+ + PS L D + C S + R DGS A P + C
Sbjct: 1550 -TSCESPSVLCPD-----MSVCVSQAQLCDGRRDCPDGSDEASCLDACAVPGDFLCEDRR 1603
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG--------KCIPESWKCDGFV 228
+C+A + CDG+ C +G DE C + TP F C +G +C+ + CDG
Sbjct: 1604 KCIAEALVCDGQSHCFDGSDE-VGCKTKMTP--FKCRVGSKPCKNGRECVRYNHLCDGDR 1660
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDK 286
DC DGSDE + C QC G QC KKCI +CD C D++DE W
Sbjct: 1661 DC-RDGSDEED-CELQCDPGMFQCIQGKKCIDFRQVCDGTPQCP-----DHSDEANCWKP 1713
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C ++C + +CIP ++C+ DC D DE D C +
Sbjct: 1714 TKTC---SIRCDGNTRCIPEVFVCNGMRDC-----WDGADE-ADCAMPTPPSPCKSPYVA 1764
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
C ++ C+ CDG+ DC +G DE P N
Sbjct: 1765 CQGTSLCILKQYLCDGRKDCPDGSDERPCLRN 1796
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/407 (25%), Positives = 162/407 (39%), Gaps = 74/407 (18%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFN 63
+C G C ++C+ H +CD E DC D +DE A +F
Sbjct: 2059 KCRVGSKPCNDGRQCVLHTHVCDGEKDCD-----DGSDEQG--------CPNRCKADQFR 2105
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
+ +C I ++ V +C +D LN + R +N++ +
Sbjct: 2106 CAHGRMC-IDKKQVCDGTPQCQDRSDELNCF-----------TRSHDCKHQCDNKTRCI- 2152
Query: 124 KNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALS 182
P S + D +D + D ++ ++ + C + C +++C+ S
Sbjct: 2153 -----PESFLCDGEKDCVDATDEANCPSIPDASNADPLKTLGCRSPSMFCKETSKCMPES 2207
Query: 183 KFCDGKPDCSNGEDEGPFCNAECT-PGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNT 240
+ CDGK DC +G DE FC C+ P F C KC+ ++ CDG+ C DGSDE
Sbjct: 2208 QLCDGKVDCPSGADE-QFCIYSCSDPDHFLCKDKRKCVHKAVVCDGYSHC-ADGSDE--- 2262
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCF 291
+QC +QC C+ CD +E DC T ++ +T +C
Sbjct: 2263 --YQCPTCALQCDQKTVCLTKQQRCDGKPDCRDGSDEKDCYTGGVIASTSLPL----RCP 2316
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
G C K+C+ + LCD E DC D +DE + C + +C
Sbjct: 2317 LGSKPCMDGKECVLLDHLCDGEKDCK-----DGSDERTCER------KCKKGQFQCSHGR 2365
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL--KCSHKCSPTPR 396
+C+ + CDG P C + DE A+C L +C H+C R
Sbjct: 2366 KCIDMKFVCDGTPQCQDRSDE-------ANCMKLSDECRHQCDNKTR 2405
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 145 DSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
+ ++ T + R D +C + C ++ C++ ++ CDGK DC +G DE +A
Sbjct: 905 EKNVVTRNTDRSDVQPPPPVCKRPSMLCPGTSLCISQTRLCDGKLDCPDGSDEVSCVHAC 964
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDE---------PNTCIHQCFNGQVQCAL 254
PG F C KC+ + CDG DC DGSDE N +C G C
Sbjct: 965 SNPGDFLCKDRRKCVDGNQVCDGRSDCF-DGSDEMACYLSARTSNKVPLKCRVGSKPCND 1023
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
++C+ H+ +CD E DC D +DE ++C Q +CA + CI +CD
Sbjct: 1024 GRQCVLHDHVCDGEKDCK-----DGSDERGCP-NRCKADQFRCAHGRMCIDKKQVCDGTP 1077
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C D +DE SH+ + +C + +C+ S CDG+ DC + DE
Sbjct: 1078 QCQ-----DRSDELNCFTRSHDC------KHQCDNKTRCIPESFLCDGERDCVDATDEA 1125
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 112/280 (40%), Gaps = 65/280 (23%)
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
E V D V C ++ C S C++ S+ CDGK DC +G DE + F
Sbjct: 454 EIVTKDVPPTEVTCKSPQVFCPGSTVCISRSQRCDGKRDCPDGSDEVSCLHMCAKADDFL 513
Query: 212 CGMG-KCIPESWKCDGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIP 260
C G KC+ + CDG C DGSDE N+ +C G C ++C+
Sbjct: 514 CKDGSKCVGKDLVCDGRSHCF-DGSDEDECPTMVAENSNSGPLRCRVGSKLCNDGRQCVL 572
Query: 261 HNWLCDEEMDCS---------------------------TDDIVDNTDEDWDK------F 287
H+ +CD E DC + D T D+ F
Sbjct: 573 HDHVCDGEKDCEDGSDEQGCPNRCKADQFRCAHGRMCIDKKQVCDGTPHCQDRSDELNCF 632
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---------------WDKY 332
Q + + QC +CIP ++LCD E DC VD TDE ++
Sbjct: 633 TQSHDCRHQCDNKTRCIPESFLCDGERDC-----VDATDEANCPKTSRGEVSVMPIYEDT 687
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + +C + C + +C++ ++ CDG+ DC +G DE
Sbjct: 688 PTSSPPVCQSPSVLCPGTLECISPNRLCDGRTDCPDGSDE 727
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 112/309 (36%), Gaps = 77/309 (24%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
V + + + C C QCV CDG+ DC +G DE C C QF C
Sbjct: 546 VAENSNSGPLRCRVGSKLCNDGRQCVLHDHVCDGEKDCEDGSDE-QGCPNRCKADQFRCA 604
Query: 214 MGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
G+ CI + CDG C +D SDE N C Q + + QC +CIP ++LCD E DC
Sbjct: 605 HGRMCIDKKQVCDGTPHC-QDRSDELN-CFTQSHDCRHQCDNKTRCIPESFLCDGERDC- 661
Query: 273 TDDIVDNTDED--------------------WDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
VD TDE C + V C + +CI N LCD
Sbjct: 662 ----VDATDEANCPKTSRGEVSVMPIYEDTPTSSPPVCQSPSVLCPGTLECISPNRLCDG 717
Query: 313 EMDC--------------STDDI---------------------VDNTDEDWDKYFSHNA 337
DC DD D +DED +
Sbjct: 718 RTDCPDGSDEDSCFDDCAKPDDFPCKDGSKCVGKDLVCDGRSHCTDGSDEDGCPTMASEN 777
Query: 338 VLCHPNELRCGS-----SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
P R GS QCV CDG+ DC +G DE C N+ + +C+H
Sbjct: 778 SNSGPLRCRVGSKLCNDGRQCVLHDHVCDGEKDCEDGSDE-QGCPNRCKADQFRCAH--- 833
Query: 393 PTPRGAMCF 401
G MC
Sbjct: 834 ----GRMCI 838
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSC-GMGKCIPESWKC 224
+RC + +C+ C+G DC +G DE P + C +C G CI + + C
Sbjct: 1719 IRCDGNTRCIPEVFVCNGMRDCWDGADEADCAMPTPPSPCKSPYVACQGTSLCILKQYLC 1778
Query: 225 DGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
DG DC DGSDE C+ C + C KCI +CD C +D++DE
Sbjct: 1779 DGRKDC-PDGSDE-RPCLRNCPYRSDFMCKDRTKCIDRKQVCDGRFHC-----IDHSDEI 1831
Query: 283 ---------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+C G C ++C+ H+ +CD E DC D D D D++
Sbjct: 1832 GCATTAPTTTTKASLRCRVGSKPCRDGRECVLHSHVCDGESDCK--DGSDEIDCDFN--- 1886
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHKCS 392
C + +C +C+ CDGKP C + DE F +K+ CSH+C
Sbjct: 1887 ------CEAGQFQCAHGRKCIDAKLVCDGKPQCQDFSDEKDCFTRSKS------CSHRCD 1934
Query: 393 PTPR 396
R
Sbjct: 1935 NKTR 1938
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 105/261 (40%), Gaps = 60/261 (22%)
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------------PFCNAE 204
+C + +C+ S CDG+ DC + DE P C
Sbjct: 1284 QCDNKTRCIPESFLCDGERDCVDATDEANCSEIKGEEDKSVTPNKDTSGLQPPPPVCR-- 1341
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKCIPHNW 263
+P + CI ++ CDG +DC DGSDE +CI C G C +KCI N
Sbjct: 1342 -SPSRLCPVTSLCITQTQICDGRIDC-PDGSDEV-SCIDVCSKPGHFLCKDRRKCIEGNL 1398
Query: 264 LCDEEMDCSTDDIVDNTDE---------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CD DC +D++DE C G C + C+P + LCD +
Sbjct: 1399 VCDGHSDC-----LDDSDELDCSIPAKTTTRPALACRVGSKPCKDGRGCVPQSHLCDGDE 1453
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC D +DE+ C + +C S +C+ +++ CDG P C + DE
Sbjct: 1454 DCK-----DGSDEE------DCGHQCQEGQFQCVSGGRCIKMNQVCDGTPQCLDNSDEA- 1501
Query: 375 FCNNKADCENLKC--SHKCSP 393
C + +L+C H C P
Sbjct: 1502 GCRKPSRSCSLRCDWDHHCVP 1522
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 166/466 (35%), Gaps = 112/466 (24%)
Query: 11 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFN------- 63
QC +CIP ++LCD E DC VD TDE K + T + +
Sbjct: 869 QCDNKTRCIPESFLCDGERDC-----VDATDEANCSEIKNVEKNVVTRNTDRSDVQPPPP 923
Query: 64 --HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
R LC +S RL C D + D E+ + ++R
Sbjct: 924 VCKRPSMLCPGTSLCISQTRL-CDGKLDCPDGSD----EVSCVHACSNPGDFLCKDRRKC 978
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDS---HLNTVESVRVDGSHNAVLCHPNELRCGSSNQC 178
V N V D D D +L+ S +V + C C QC
Sbjct: 979 VDGN------QVCDGRSDCFDGSDEMACYLSARTSNKV-----PLKCRVGSKPCNDGRQC 1027
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDE 237
V CDG+ DC +G DE C C QF C G+ CI + CDG C +D SDE
Sbjct: 1028 VLHDHVCDGEKDCKDGSDE-RGCPNRCKADQFRCAHGRMCIDKKQVCDGTPQC-QDRSDE 1085
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVD---------- 278
N C + + + QC +CIP ++LCD +E +CS VD
Sbjct: 1086 LN-CFTRSHDCKHQCDNKTRCIPESFLCDGERDCVDATDEANCSEIKSVDINLVTLNKDR 1144
Query: 279 ---------------------NTDEDWDKFHQCFNG--QVQCALS--------------- 300
+ ++ D CF+G ++ C LS
Sbjct: 1145 SDVQPPPPVCDFLCKDSRKCVDGNQVCDGRSDCFDGSDEMACYLSARTLNKVPLKCRVGS 1204
Query: 301 ------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
++C+ H+ +CD E DC D +DE C ++ RC C+
Sbjct: 1205 KPCNDGRQCVLHDHVCDGEKDCK-----DGSDE------RGCPNRCKADQFRCAHGRMCI 1253
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+ CDG P C + DE DC + +C +K P +C
Sbjct: 1254 DKKQVCDGTPQCQDRSDELNCFTRSHDCRH-QCDNKTRCIPESFLC 1298
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E+ M G NR LV Q P L +D + LYW H +VESVR DG+
Sbjct: 43 IERVDMDGMNRKTLVFVTAQLPRGLTLDVSARRLYWISVHKMSVESVRTDGT 94
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ ++ M G +R ++ + + WP S+ +D D LYW D L + S +DG + L
Sbjct: 2821 QIGRSSMDGSDRRAVIRRGLNWPVSVTVDILTDRLYWTDKKLGCIGSATLDGENIRFL 2878
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C + C S QC+A + CDG DC + DE +C F CG G+C+
Sbjct: 2512 LKCGEFQWSCASRTQCIAKTWRCDGMKDCQDESDESGCGQTKCPTHLFQCGSGECMDPDL 2571
Query: 223 KCDGFVDCLEDGSDEPNTCI 242
C+ DC DGSDE C+
Sbjct: 2572 VCNKASDC-ADGSDEGVGCL 2590
>gi|432889261|ref|XP_004075190.1| PREDICTED: very low-density lipoprotein receptor [Oryzias latipes]
Length = 847
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 158/362 (43%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ + QC+ +S CDG+ DC NG+DE N C+P +F+C G+CI +++
Sbjct: 113 CRVNEFSCGAGTTQCIPVSWKCDGEKDCDNGDDEVNCGNITCSPSEFTCTSGRCISQNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE + C + QC S CIP +W D + +D+ +
Sbjct: 173 CNSEDDC-GDGSDEVDCAPSSCGPSEFQCGNS-SCIPASWVCDDDVDCQDQSDESLSRCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C + ++QC LS +CI W CD + DC D +DE + C
Sbjct: 231 RHPTPPAKCSSSEMQC-LSGECIHKKWRCDGDPDCK-----DGSDE-----ANCPVRTCG 279
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ +C C+ S+ C+G DC++G DE GP C
Sbjct: 280 PDQFKC-EDGSCIPGSRQCNGIRDCTDGSDEVDCKNLSQCSGPEKFKCRSGECIDMSKVC 338
Query: 377 NNKADC------------------ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDAD 417
N DC N CSH C G C C P Q + C D +
Sbjct: 339 NKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDIN 398
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC+ G C Q C N Y C C GY + P C AV EP +IF++ D+RR+
Sbjct: 399 ECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDVRRL 454
Query: 478 HL 479
L
Sbjct: 455 GL 456
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 154/378 (40%), Gaps = 97/378 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +CG+ +C+ CDG+ DC++G DE C F C G+C+P+ W C
Sbjct: 33 CETNQFQCGNG-RCIPSIWQCDGEDDCTDGSDEKSCVQKTCAEVDFVCRNGQCVPKRWHC 91
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE H C + C A + +CIP +W CD E DC DN D
Sbjct: 92 DGEPDC-EDGSDESLEICHMRTCRVNEFSCGAGTTQCIPVSWKCDGEKDC------DNGD 144
Query: 282 EDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVD---------------- 323
++ + + C + C S +CI N++C+ E DC D VD
Sbjct: 145 DEVNCGNITCSPSEFTCT-SGRCISQNFVCNSEDDCGDGSDEVDCAPSSCGPSEFQCGNS 203
Query: 324 -----------------NTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKP 364
+DE + H C +E++C S +C+ CDG P
Sbjct: 204 SCIPASWVCDDDVDCQDQSDESLSRCGRHPTPPAKCSSSEMQC-LSGECIHKKWRCDGDP 262
Query: 365 DCSNGEDE--------GP---------------FCN---------NKADCENL-KCSHKC 391
DC +G DE GP CN ++ DC+NL +CS
Sbjct: 263 DCKDGSDEANCPVRTCGPDQFKCEDGSCIPGSRQCNGIRDCTDGSDEVDCKNLSQCSGPE 322
Query: 392 SPTPRGAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCS 439
R C CP + +C + +ECL+ +G C C + + + C
Sbjct: 323 KFKCRSGECIDMSKVCNKVRDCPDWSDEPIKEC-NVNECLLNNGGCSHICKDMVIGFECD 381
Query: 440 CTEGYTLRPDGKSCTAVN 457
CT G L D K+C +N
Sbjct: 382 CTPGLQL-IDHKTCGDIN 398
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 87/173 (50%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
EC QF CG G+CIP W+CDG DC DGSDE + C C + +C+P
Sbjct: 31 TECETNQFQCGNGRCIPSIWQCDGEDDCT-DGSDEKSCVQKTCAEVDFVCR-NGQCVPKR 88
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD E DC D +DE + H C + C A + +CIP +W CD E DC
Sbjct: 89 WHCDGEPDCE-----DGSDESLEICHMRTCRVNEFSCGAGTTQCIPVSWKCDGEKDC--- 140
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN D++ + + C P+E C +S +C++ + C+ + DC +G DE
Sbjct: 141 ---DNGDDE----VNCGNITCSPSEFTC-TSGRCISQNFVCNSEDDCGDGSDE 185
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 54 GTHTLALE-FNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT T+++ FN Q + F Q + +S+ + + W PA ++EK+
Sbjct: 535 GTKTISVSNFNGTIQKVLFNQGLKEPASIAVDPLSGFLYWSDWGEPA--------KIEKS 586
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVLCHPNEL 170
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + VL P L
Sbjct: 587 GMNGVDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSPEYL 646
>gi|350593219|ref|XP_003359470.2| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Sus scrofa]
Length = 597
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C N + C N+CV LS+ C+G DCS+G DEG C C++L C +KC+
Sbjct: 78 CPLNHIACLGDNKCVHLSQMCNGVLDCSDGYDEGVHCRELLPSCQHLNCQYKCAIVRNST 137
Query: 399 MCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
+C+C G +K C D DEC I G+C QTC NT+ SY CSC EGY ++PD +SC A
Sbjct: 138 ICYCEDGFEIKEDKRSCKDQDECAIYGTCSQTCINTYGSYACSCVEGYLMQPDNRSCRAK 197
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D P ++ +++ I +LNGS
Sbjct: 198 NEPTDRPPMLLIANSETIEVFYLNGS 223
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGKCI 218
C N + C N+CV LS+ C+G DCS+G DEG C E P Q+ C + +
Sbjct: 78 CPLNHIACLGDNKCVHLSQMCNGVLDCSDGYDEGVHCR-ELLPSCQHLNCQYKCAIVRNS 136
Query: 219 PESWKCDGF 227
+ DGF
Sbjct: 137 TICYCEDGF 145
>gi|119874450|gb|ABM05723.1| vitellogenin receptor [Oryzias latipes]
Length = 802
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 158/362 (43%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ + QC+ +S CDG+ DC NG+DE N C+P +F+C G+CI +++
Sbjct: 77 CRVNEFSCGAGTTQCIPVSWKCDGEKDCDNGDDEVNCGNITCSPSEFTCTSGRCISQNFV 136
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDEEMDCSTDDIVDNTD 281
C+ DC DGSDE + C + QC S CIP +W D + +D+ +
Sbjct: 137 CNSEDDC-GDGSDEVDCAPSSCGPSEFQCGNS-SCIPASWVCDDDVDCQDQSDESLSRCG 194
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C + ++QC LS +CI W CD + DC D +DE + C
Sbjct: 195 RHPTPPAKCSSSEMQC-LSGECIHKKWRCDGDPDCK-----DGSDE-----ANCPVRTCG 243
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
P++ +C C+ S+ C+G DC++G DE GP C
Sbjct: 244 PDQFKC-EDGSCIPGSRQCNGIRDCTDGSDEVDCKNLSQCSGPEKFKCRSGECIDMSKVC 302
Query: 377 NNKADC------------------ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDAD 417
N DC N CSH C G C C P Q + C D +
Sbjct: 303 NKVRDCPDWSDEPIKECNVNECLLNNGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDIN 362
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC+ G C Q C N Y C C GY + P C AV EP +IF++ D+RR+
Sbjct: 363 ECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDVRRL 418
Query: 478 HL 479
L
Sbjct: 419 GL 420
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 152/374 (40%), Gaps = 97/374 (25%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ +CG+ +C+ CDG+ DC++G DE C F C G+C+P+ W CDG
Sbjct: 1 QFQCGNG-RCIPSIWQCDGEDDCTDGSDEKSCVQKTCAEVDFVCRNGQCVPKRWHCDGEP 59
Query: 229 DCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC EDGSDE H C + C A + +CIP +W CD E DC DN D++ +
Sbjct: 60 DC-EDGSDESLEICHMRTCRVNEFSCGAGTTQCIPVSWKCDGEKDC------DNGDDEVN 112
Query: 286 KFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVD-------------------- 323
+ C + C S +CI N++C+ E DC D VD
Sbjct: 113 CGNITCSPSEFTCT-SGRCISQNFVCNSEDDCGDGSDEVDCAPSSCGPSEFQCGNSSCIP 171
Query: 324 -------------NTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+DE + H C +E++C S +C+ CDG PDC +
Sbjct: 172 ASWVCDDDVDCQDQSDESLSRCGRHPTPPAKCSSSEMQC-LSGECIHKKWRCDGDPDCKD 230
Query: 369 GEDE--------GP---------------FCN---------NKADCENL-KCSHKCSPTP 395
G DE GP CN ++ DC+NL +CS
Sbjct: 231 GSDEANCPVRTCGPDQFKCEDGSCIPGSRQCNGIRDCTDGSDEVDCKNLSQCSGPEKFKC 290
Query: 396 RGAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEG 443
R C CP + +C + +ECL+ +G C C + + + C CT G
Sbjct: 291 RSGECIDMSKVCNKVRDCPDWSDEPIKEC-NVNECLLNNGGCSHICKDMVIGFECDCTPG 349
Query: 444 YTLRPDGKSCTAVN 457
L D K+C +N
Sbjct: 350 LQL-IDHKTCGDIN 362
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 54 GTHTLALE-FNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT T+++ FN Q + F Q + +S+ + + W PA ++EK+
Sbjct: 499 GTKTISVSNFNGTIQKVLFNQGLKEPASIAVDPLSGFLYWSDWGEPA--------KIEKS 550
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVLCHPNEL 170
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + VL P L
Sbjct: 551 GMNGVDRQVLVETDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSPEYL 610
>gi|431918959|gb|ELK17826.1| Low-density lipoprotein receptor [Pteropus alecto]
Length = 881
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/377 (31%), Positives = 164/377 (43%), Gaps = 80/377 (21%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
++ C + CG N+C+ CDG+ DC NG DE C+ +F C G CI
Sbjct: 101 SITCKLGDFSCGGRVNRCIPQFWRCDGQMDCENGSDEQGCPPKTCSHDEFRCQDGMCIFP 160
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S+ CD +DCL DGSDE + C QC S CIP W+CD++ DC DN+
Sbjct: 161 SFVCDSDLDCL-DGSDEASCPTSTCGPSSFQCN-SSICIPELWVCDDDPDCE-----DNS 213
Query: 281 DEDW-----DKFHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DE W D++ C + C S +CI +W CD DC D +DE+
Sbjct: 214 DE-WPQRCGDRYRSAKRDNPCSAFEFHCR-SGECIHSSWRCDGGPDCK-----DKSDEE- 265
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP----- 374
+ A C P+E +C S C+ S+ CD + DC++ D EGP
Sbjct: 266 ----NCTAATCGPDEFQC-SDGPCIHGSQQCDREYDCTDMSDELGCVNVTLCEGPTKFKC 320
Query: 375 ----------FCNNKADC-----ENLK-------------CSHKCSPTPRGAMCFCPAG- 405
CN+ DC E LK CSH C+ G C CP G
Sbjct: 321 HSGECIAMDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCPEGF 380
Query: 406 QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
Q + C D +EC +C Q C N SY C C EG+ L P K+C A A
Sbjct: 381 QLVGRLTCEDINECQDPDTCSQLCVNLEGSYKCECEEGFQLDPFSKACKATGT----IAY 436
Query: 466 IIFSSTVDIRRIHLNGS 482
+ F++ ++R++ L+ S
Sbjct: 437 LFFTNRHEVRKMTLDRS 453
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/343 (30%), Positives = 144/343 (41%), Gaps = 84/343 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCG--MGKCIPE 220
C NE +C C++ CDG+ +C +G DE C + C G FSCG + +CIP+
Sbjct: 63 CERNEFQC-QDGTCISYKWVCDGRAECQDGSDESQEMCLSITCKLGDFSCGGRVNRCIPQ 121
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W+CDG +DC E+GSDE P TC H F Q CI +++CD ++DC
Sbjct: 122 FWRCDGQMDC-ENGSDEQGCPPKTCSHDEFRCQ-----DGMCIFPSFVCDSDLDC----- 170
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-----DK 331
+D +DE C QC S CIP W+CD++ DC DN+DE W D+
Sbjct: 171 LDGSDEASCPTSTCGPSSFQCN-SSICIPELWVCDDDPDCE-----DNSDE-WPQRCGDR 223
Query: 332 YFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GP-------- 374
Y S C E C S +C+ S CDG PDC + DE GP
Sbjct: 224 YRSAKRDNPCSAFEFHC-RSGECIHSSWRCDGGPDCKDKSDEENCTAATCGPDEFQCSDG 282
Query: 375 -------FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD---------- 417
C+ + DC ++ C +C P + +C+ D
Sbjct: 283 PCIHGSQQCDREYDCTDMSDELGCVNV---TLCEGPTKFKCHSGECIAMDKVCNSVRDCR 339
Query: 418 -------------ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 340 DWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCPEGFQL 382
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S
Sbjct: 563 WGTPA--------KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISS 614
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 615 INVNGGNRKTVLEDKKKLAHPFSL 638
>gi|37728099|gb|AAO92396.1| vitellogenin receptor [Morone americana]
Length = 844
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 159/376 (42%), Gaps = 71/376 (18%)
Query: 157 DGSHNAV------LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +V C NE CG+ S QC+ + CDG+ DC NGEDE N C P +
Sbjct: 96 DGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCDGEKDCDNGEDEVHCGNITCAPNE 155
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDE 267
F+C G+CI ++ C+G DC DGSDE C + QC S CIP +W D
Sbjct: 156 FTCASGRCISRNFVCNGEDDC-GDGSDEVECAPSSCGPSEFQCGNS-SCIPASWVCDDDV 213
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ +D+ +C + ++QC S +CI W CD + DC D++DE
Sbjct: 214 DCQDQSDESPTRCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDPDCK-----DSSDE 267
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ C P++ +C N C+ S+ C+ DC++G DE GP
Sbjct: 268 -----ANCPVRTCGPDQFKCDDGN-CILGSRQCNSHRDCTDGSDEVNCKDMTQCNGPEKF 321
Query: 375 ------------FCNNKADC------------------ENLKCSHKCSPTPRGAMCFC-P 403
CN DC N CSH C G C C P
Sbjct: 322 KCRSGECIEMSKVCNKVRDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTP 381
Query: 404 AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
Q + C D +ECL G C Q C N Y C C GY + P C AV EP
Sbjct: 382 GLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEP 438
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIRR+ L
Sbjct: 439 C-LIFTNRRDIRRLGL 453
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 29/194 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +CG+ +C+ CDG DC++G DE C F C G+C+P+ W C
Sbjct: 30 CEASQFQCGNG-RCIPSVWQCDGDEDCTDGSDENSCVRKTCAEVDFVCRNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE H C + C A S +CIP W CD E DC D
Sbjct: 89 DGEPDC-EDGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCDGEKDC---------D 138
Query: 282 EDWDKFH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D+ H C + CA S +CI N++C+ E DC D +DE
Sbjct: 139 NGEDEVHCGNITCAPNEFTCA-SGRCISRNFVCNGEDDCG-----DGSDE-----VECAP 187
Query: 338 VLCHPNELRCGSSN 351
C P+E +CG+S+
Sbjct: 188 SSCGPSEFQCGNSS 201
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 29/157 (18%)
Query: 54 GTHTLALE-FNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT T+++ FN Q + F + + +S+ + + W PA ++EK+
Sbjct: 532 GTKTISVANFNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPA--------KIEKS 583
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VL 164
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + L
Sbjct: 584 GMNGVDRQVLVASDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSADYL 643
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
HP AL+ F D + ++GE+E +C
Sbjct: 644 AHP-----------FALTVFED-RVFWTDGENEAIYC 668
>gi|110190113|gb|AAZ31260.3| vitellogenin receptor [Dermacentor variabilis]
Length = 1798
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 169/423 (39%), Gaps = 93/423 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
YWCD H + ++ + S C + C S+ +C+ CDG DC + DE
Sbjct: 909 YWCDGHKDCSDNAD-EASCGPATCPSTDFTC-SNGRCIENEWRCDGYNDCGDLSDEKNCT 966
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
C Q++C G C+P W+CDG DC DG DE N +C +G +CA + +CIPH
Sbjct: 967 RQTCATHQYTCRSGVCVPLYWRCDGSEDC-PDGDDELNCSGVRCPSGHDRCA-NGQCIPH 1024
Query: 262 NWL---------------CDEEMDCSTDDIV--------------------DNTDE---D 283
+W C E + C DD D++DE D
Sbjct: 1025 DWTCDGHADCTDSSDEKNCTEPLTCLVDDFRCTNGQCLDKRLRCDHDNDCEDSSDEVGCD 1084
Query: 284 WDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC---------------STDDIVDNTD 326
+ K ++ C G V C CI + +CD +DC S + T
Sbjct: 1085 YAKVNRSKCSTGMVDCG-DGHCIYAHDMCDGYVDCHNGRDERNCSAPICQSAEFFCTGTK 1143
Query: 327 ----EDWDKYFSHNAVL--------CHP--------------NELRCGSSNQCVALSKFC 360
+ W + CHP NE +CGS ++C+A + C
Sbjct: 1144 RCILQSWLCDGDDDCGDGMDELLPRCHPTTQVATTTVAACWGNEFQCGS-HECIAWTSVC 1202
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADE 418
DG+ DC++ DEG C N C+H C +P G +C C G N + C D DE
Sbjct: 1203 DGRTDCADFSDEGSHCVKHCGTANGGCAHICRESPSGPICSCQPGYRLNSDHKSCDDVDE 1262
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
C G C C N+ + C+C +GY L D + C Q A +++ IR
Sbjct: 1263 CATPGHCSHFCQNSKGGFKCTCADGYALGVDRRYCKV----QYGEAFLLYMLPNQIRSFS 1318
Query: 479 LNG 481
++G
Sbjct: 1319 MHG 1321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCI 259
EC G F CG +CI W+CDG DC GS + T H+C + + C C+
Sbjct: 23 ECQQGWFDCGNDRCITMFWRCDGQNDC---GSHKDETGCSDHAHRCPSDKYACRDGSYCV 79
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W+CD E DC D++DE C + + +CIP++W CDE DC+
Sbjct: 80 PEIWVCDGEADCH-----DSSDELDCHSSNCTGYRCH---NNECIPNHWHCDETEDCADA 131
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
N + + A C ++ R QC+ SK CDG+ DC +G DEG FC
Sbjct: 132 SDELNCHAATNSSTTTVAPRCGVDQGRFPCLDGQCLLPSKVCDGRKDCGDGADEGAFCKV 191
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLS 435
+C KCS C G+ C+C G + C D DEC + C CTN+ S
Sbjct: 192 N-ECSQKKCSQGCFVATNGSTCYCNTGFRLMADHISCADVDECAEEPYVCSHGCTNSPGS 250
Query: 436 YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C EGY L D C A +D +++S+T +IR + L
Sbjct: 251 YSCHCLEGYQL-ADKSFCKA----RDPEPLLLYSNTKEIRGLWLR 290
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 106/253 (41%), Gaps = 50/253 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+EL C + +C+A + +CDG DCS+ DE A C F+C G+CI W+C
Sbjct: 893 CRPHELPC--AGRCIAATYWCDGHKDCSDNADEASCGPATCPSTDFTCSNGRCIENEWRC 950
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG+ DC D SDE N C Q C S C+P W CD DC D DE
Sbjct: 951 DGYNDC-GDLSDEKNCTRQTCATHQYTCR-SGVCVPLYWRCDGSEDCP-----DGDDELN 1003
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------------------------- 317
+C +G +CA + +CIPH+W CD DC+
Sbjct: 1004 CSGVRCPSGHDRCA-NGQCIPHDWTCDGHADCTDSSDEKNCTEPLTCLVDDFRCTNGQCL 1062
Query: 318 --------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
+D D++DE Y N C + CG C+ CDG DC NG
Sbjct: 1063 DKRLRCDHDNDCEDSSDEVGCDYAKVNRSKCSTGMVDCG-DGHCIYAHDMCDGYVDCHNG 1121
Query: 370 EDE----GPFCNN 378
DE P C +
Sbjct: 1122 RDERNCSAPICQS 1134
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
ND L W + + +E++ M G R L+T I WP S+ +D +YW D++
Sbjct: 1427 NDGLMFWAVWHEVVNKDHGLIERSNMDGTTRVVLLTDKILWPCSITVDAVHKRIYWSDAN 1486
Query: 148 LNTVESVRVDGSHNAVL 164
N +ES DG ++
Sbjct: 1487 KNVIESATYDGKQRKLV 1503
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
M G N + LV+ ++ WP+ L +D+ + LYWCD+ L+ +E + + AV+
Sbjct: 420 MDGTNVAQLVSTDLGWPNGLTLDHTTNRLYWCDAKLSRLEYLELSTLRRAVV 471
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 37/87 (42%), Gaps = 19/87 (21%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNA------ECTPGQFSCGMG---------KCIPE 220
QC+ SK CDG+ DC +G DEG FC +C+ G F G + + +
Sbjct: 164 GQCLLPSKVCDGRKDCGDGADEGAFCKVNECSQKKCSQGCFVATNGSTCYCNTGFRLMAD 223
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFN 247
C +C E EP C H C N
Sbjct: 224 HISCADVDECAE----EPYVCSHGCTN 246
>gi|212645014|ref|NP_491270.2| Protein LRP-2 [Caenorhabditis elegans]
gi|351063245|emb|CCD71369.1| Protein LRP-2 [Caenorhabditis elegans]
Length = 4858
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 120/342 (35%), Positives = 156/342 (45%), Gaps = 54/342 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPG-QFSCGMGK--CI 218
LC P+E RCG+ C+ S+ CDGK C +G DE CN E C G QF C GK C+
Sbjct: 1052 LCDPDEFRCGTG-LCIKQSQVCDGKMQCLDGLDE-EHCNEEEKCLQGRQFRCANGKSTCL 1109
Query: 219 PESWKCDGFVDCLEDGSDEPN---------TCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
++CDG DC ED SDE + TC Q CA KC+ LCD
Sbjct: 1110 DLIFRCDGVADC-EDSSDESDEFCKGNSSSTCGKM---NQFMCA-DGKCLRSFQLCDGFP 1164
Query: 270 DCSTDDIVDNTDE-----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC T + D T+ D C NGQ KCI CD DD DN
Sbjct: 1165 DCLTGE--DETECPPSMCDSTTHLSCLNGQ-------KCISKQLECD-----GVDDCGDN 1210
Query: 325 TDED--WDKYFSHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKA 380
+DE + A+ C +C G + +C++ CDG DC G+DEG +C N
Sbjct: 1211 SDEKHCTEIRLDEAALRCQSPMYQCDGPNFKCISDKHLCDGTNDCEEGDDEGLWCTFNCT 1270
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
D ++L CSH C PTP G +C CP + N C D C G C Q C+ S+ C
Sbjct: 1271 DADDLGCSHTCRPTPVGPICSCPDDHYLDKNGVTCSKKDPCRF-GQCSQYCSPHGSSHFC 1329
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPAS--IIFSSTVDIRRIH 478
C + + L D SC + D+P +I+S+ +IR I
Sbjct: 1330 YCEDSFKLGADRSSCIS-----DDPRKPFLIYSNRHEIRMIQ 1366
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/236 (34%), Positives = 111/236 (47%), Gaps = 27/236 (11%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP--- 207
+ R +G C PN+ C + +C++ CDG+ DC +GEDEG F C P
Sbjct: 3468 AQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEGYFVEGVCPPFPC 3527
Query: 208 --GQFSCG------MGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKC 258
GQF CG +C+ S CDG DC +EP C + +C Q +C KKC
Sbjct: 3528 IAGQFVCGRTAQNATAQCLYASKLCDGVKDCSGGDDEEPAFCENFECTEAQFKCGDKKKC 3587
Query: 259 IPHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
IP +CD+E DC +D++ F CFNG A+S KCIP + CD E DC
Sbjct: 3588 IPLTSVCDKEKDCDDGSDELNCEITSCKPDFFACFNGT---AIS-KCIPKEFYCDGEDDC 3643
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE D F C + +C +S +C+ + CDG DC +G DE
Sbjct: 3644 P-----EGQDEP-DSCFGIGE--CTHEQFQC-TSGKCIPKRRQCDGTLDCRDGSDE 3690
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 120/297 (40%), Gaps = 76/297 (25%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMG 215
G + C NE +C S++C+ CD DC +DE +C+ C PG F+CG G
Sbjct: 2632 GEFDGKKCAENEFKCLHSDRCIRYEDTCDRYNDCPMFDDEDTKYCSTRVCRPGYFNCGNG 2691
Query: 216 KCIPESWKCDGFVDCL-----------------------------------EDGSDEPNT 240
CIPE C+ DC D SDE
Sbjct: 2692 LCIPEQKVCNRINDCANFADESNCTCNENEFRCQSGACIPSKARCNHMQDCNDASDEIGC 2751
Query: 241 CIHQC-------FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKFH 288
C G + CA + +CI +W CD T+D D +DE ++D
Sbjct: 2752 PFRNCSALNEFGMTGLINCATTSQCIHPSWKCD-----GTNDCYDGSDEKDCFVEFDATG 2806
Query: 289 QCFNG--------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ Q C ++ C+P +W CD + DC+ D +DE + +A C
Sbjct: 2807 GSVSAPRSCDAKTQFACLATRTCMPKHWQCDGQPDCA-----DGSDEK-----NCDAKKC 2856
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNNKADCENLKCS-HKCSP 393
E C SS +C+ L + CDG+ DC +GEDE C++K +C+ H+C P
Sbjct: 2857 TSFEFSCESSKKCIPLEQKCDGRRDCPDGEDEHQCETECDSKGGNATFRCTNHRCIP 2913
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 148/357 (41%), Gaps = 71/357 (19%)
Query: 95 DLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D PA ++ D + + G R ++ +++ +L + +D +YW D H +T+
Sbjct: 3336 DAPAQRLYFGDAHRDYIASCNYDGSKRRMVLRGSVRHIFALAV--FEDYVYWSDWHNHTI 3393
Query: 152 ESV-RVDGSHNAVL-------------CHPNELRCGS---SNQCVALSKFCD------GK 188
E V ++ G++ VL HP+ GS + + CD
Sbjct: 3394 ERVHKITGTNRKVLIQDKQYRPMGFKIVHPSLQSMGSLKTARHPCSQPARCDNLCIPANT 3453
Query: 189 PDCSNGED------------EGPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGS 235
PD + D EG C +EC P F C KCI W+CDG DC DG
Sbjct: 3454 PDLTTSSDNFTCMCAQGFRSEGRSCVSECKPNDFVCTKTYKCISSWWRCDGQDDC-GDGE 3512
Query: 236 DE---------PNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DE P CI F G+ + +C+ + LCD DCS D+ + +
Sbjct: 3513 DEGYFVEGVCPPFPCIAGQFVCGRTAQNATAQCLYASKLCDGVKDCSGG---DDEEPAFC 3569
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+ +C Q +C KKCIP +CD+E DC D +DE + C P+
Sbjct: 3570 ENFECTEAQFKCGDKKKCIPLTSVCDKEKDCD-----DGSDE-----LNCEITSCKPDFF 3619
Query: 346 RC---GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC-SHKCSPTPR 396
C + ++C+ +CDG+ DC G+DE C +C E +C S KC P R
Sbjct: 3620 ACFNGTAISKCIPKEFYCDGEDDCPEGQDEPDSCFGIGECTHEQFQCTSGKCIPKRR 3676
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 90/206 (43%), Gaps = 13/206 (6%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
KC P W CD DC D++DE C + C + KC+P +LCD + DC
Sbjct: 53 KCYPEQWYCDGFPDCQ-----DSSDEPSTCKRTCLENEFVCK-TGKCLPRGYLCDSQYDC 106
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D D + + C NE C S QCV L KFCDGK DCS+G DE C
Sbjct: 107 GRLPNGDRDLSDEAPELCNQPLHCDYNEYACSKSAQCVPLFKFCDGKRDCSDGSDEHSMC 166
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN-KTQCVDADECL-----IDGSCDQTCT 430
+ + C + + T G C+CP + N + +C + C + C Q CT
Sbjct: 167 HVEDPKTADSCEYGAAMTIDGIKCYCPKNKFLNEQGKCEFVNHCERTKNGLPPVCSQDCT 226
Query: 431 -NTHLSYVCSCTEGYTLRPDGKSCTA 455
N + ++ CSC + +G C A
Sbjct: 227 DNKNGTFTCSCFDPRLTVVNGTHCVA 252
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 139/358 (38%), Gaps = 97/358 (27%)
Query: 152 ESVRVDGSHNAVLCHPNELRCG-----SSNQCVALSKFCDGKPDCSNGEDEGP-FC-NAE 204
E V+G C + CG ++ QC+ SK CDG DCS G+DE P FC N E
Sbjct: 3514 EGYFVEGVCPPFPCIAGQFVCGRTAQNATAQCLYASKLCDGVKDCSGGDDEEPAFCENFE 3573
Query: 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTCI-------HQCFNGQVQCALSK 256
CT QF CG KCIP + CD DC +DGSDE N I CFNG A+SK
Sbjct: 3574 CTEAQFKCGDKKKCIPLTSVCDKEKDC-DDGSDELNCEITSCKPDFFACFNGT---AISK 3629
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CIP + CD E DC D D + +C + Q QC S KCIP CD +DC
Sbjct: 3630 -CIPKEFYCDGEDDCPEGQ--DEPDSCFG-IGECTHEQFQCT-SGKCIPKRRQCDGTLDC 3684
Query: 317 S----------------------TDDIVD-----NTDEDWDKYFSHNAVLCHPNELRCGS 349
DD+ D N D D+ L +CG
Sbjct: 3685 RDGSDEKGCKKECAIVCDNSCVHADDLCDGKKKCNDGSDEDEEACVIKQLLEKENRKCGG 3744
Query: 350 --------------SNQCVAL--------SKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C L S CDG DCS+G+DE C+N + +C
Sbjct: 3745 FACDGIVDCEDGSDEKGCPDLECHLASNKSLICDGTIDCSSGKDENN-CHNNGESNFFQC 3803
Query: 388 SHKC-------------------SP---TPRGAMCFCPAGQNPNKTQCVDADECLIDG 423
S + SP R A CF G +K QC+D L DG
Sbjct: 3804 SMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCF-RIGYCDDKKQCLDVSTALCDG 3860
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 137/346 (39%), Gaps = 66/346 (19%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N ++ + A+ SW+ + + +E++ + G R LV+KN W + L +D
Sbjct: 716 NPRAIAIHIAKSYLFWGSWNEDNNDDEKIPAMIERSKLDGSERKTLVSKNAMWINGLTLD 775
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHP-------------------NELRCGS-- 174
D LYWCD++ N +E +R +G+ V+ H E + G+
Sbjct: 776 LKNDYLYWCDAYRNVIERIRWNGADREVVVHGADKISHPYGLAFFDNHIFYTEFKKGAVK 835
Query: 175 ----------------SNQCVALSKFCDGKPD----CSNGEDE-GPFCNAECTPGQFSCG 213
S L F + P+ CS + FC A G C
Sbjct: 836 RVNVDFPDDVQEVFQYSATVFELLVFKNSNPETTSPCSTSSNICEHFCFASSCKGSVGCE 895
Query: 214 MGKCIPESWKCDGFVDCLEDG---SDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
KC C + L++G DE PN C ++ + C SKKC+P + LCD
Sbjct: 896 PVKC-----GCADGMKVLKNGKCVKDEEWVDPNACDNEI---EFTCLNSKKCVPKSNLCD 947
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ D D K ++C + QC C+P ++CD + DC D TD
Sbjct: 948 GDD--DCGDGSDEDANGICKDYKCVGNKFQCD-GTTCLPMEFICDGKSDC-----YDGTD 999
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E V C ++ +C S +C+ SK C+G +C NG DE
Sbjct: 1000 ELEKICKKAPIVKCSVSQFQC-SKTKCIIKSKRCNGVQECDNGADE 1044
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMGKCIPESWKCDGFVDCLED 233
VAL F + D ++ E+ P EC C G KC PE W CDGF DC +D
Sbjct: 12 VALQGFSLVQSDETSAEETQPH-YPECVAPMRECDAKSPGGPKCYPEQWYCDGFPDC-QD 69
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-----DDIVDNTDEDWDKFH 288
SDEP+TC C + C + KC+P +LCD + DC D+ D E ++
Sbjct: 70 SSDEPSTCKRTCLENEFVCK-TGKCLPRGYLCDSQYDCGRLPNGDRDLSDEAPELCNQPL 128
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C + C+ S +C+P CD + DCS
Sbjct: 129 HCDYNEYACSKSAQCVPLFKFCDGKRDCS 157
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 138/328 (42%), Gaps = 58/328 (17%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQFSCGMGK 216
+A C E C SS +C+ L + CDG+ DC +GEDE C EC F C +
Sbjct: 2852 DAKKCTSFEFSCESSKKCIPLEQKCDGRRDCPDGEDEHQ-CETECDSKGGNATFRCTNHR 2910
Query: 217 CIPESWKCDGFVDCLED----GSDEPNTCIHQCFNGQVQCALSKKCIPHN---------W 263
CIP +W+CDG DC+++ GSDE + C G+ + +C
Sbjct: 2911 CIPMAWRCDGTDDCMDNAKSLGSDEVD-----CAAGRTSFHVPSRCADETCVVACELTAV 2965
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
LCD DCS D + D+ QC + C S +CI LCD +DC VD
Sbjct: 2966 LCDGIQDCS-DGFDEKNCASLDR--QCKPNEWMCD-SGQCIDSGRLCDASVDC-----VD 3016
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS---------KFCDGKPDCSNGEDEGP 374
+DE W + S L P C S C+ + + CDG+ DC +G DE
Sbjct: 3017 GSDE-WVEICS----LSEPPRRGCPSGWSCLLTNGTIGCLQEQQLCDGRRDCMSGIDEQ- 3070
Query: 375 FCNN-KADCENLKCS----HKCSPTPRGAMCFCPAGQN---PNKTQCVDADECLIDGSCD 426
C+N + +C + + S C C C G + +K C+ + C +C
Sbjct: 3071 -CDNPQGNCSSTRNSCDQTWNCQRHAGFESCSCDDGYHLSPYDKKTCLRSPSCP-KANCS 3128
Query: 427 QTCTNTH-LSYVCSCTEGYTLRPDGKSC 453
C + + + C C GY L + K C
Sbjct: 3129 HFCIDRRDVGHQCFCAPGYILSENQKDC 3156
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 113/313 (36%), Gaps = 62/313 (19%)
Query: 108 LEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ + M G N ++ + I+WP++L +D LY+ D+H + + S DGS ++
Sbjct: 3308 IGRMNMDGSNEQVILQDRTIRWPNALAVDAPAQRLYFGDAHRDYIASCNYDGSKRRMV-- 3365
Query: 167 PNELRCGSSNQCVALSKFCD---------------------GKPDCSNGEDEGPFCNAEC 205
LR GS AL+ F D + + P
Sbjct: 3366 ---LR-GSVRHIFALAVFEDYVYWSDWHNHTIERVHKITGTNRKVLIQDKQYRPMGFKIV 3421
Query: 206 TPGQFSCGMGK---------------CIPE-----SWKCDGFV-DCLEDGSDEPNTCIHQ 244
P S G K CIP + D F C + E +C+ +
Sbjct: 3422 HPSLQSMGSLKTARHPCSQPARCDNLCIPANTPDLTTSSDNFTCMCAQGFRSEGRSCVSE 3481
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-----L 299
C C + KCI W CD + DC + E C GQ C
Sbjct: 3482 CKPNDFVCTKTYKCISSWWRCDGQDDCGDGEDEGYFVEGVCPPFPCIAGQFVCGRTAQNA 3541
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +C+ + LCD DCS D D + F N C + +CG +C+ L+
Sbjct: 3542 TAQCLYASKLCDGVKDCSGGD-------DEEPAFCEN-FECTEAQFKCGDKKKCIPLTSV 3593
Query: 360 CDGKPDCSNGEDE 372
CD + DC +G DE
Sbjct: 3594 CDKEKDCDDGSDE 3606
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL----- 231
+C +CDG PDC + DE C C +F C GKC+P + CD DC
Sbjct: 53 KCYPEQWYCDGFPDCQDSSDEPSTCKRTCLENEFVCKTGKCLPRGYLCDSQYDCGRLPNG 112
Query: 232 -EDGSDE-PNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
D SDE P C C + C+ S +C+P CD + DCS
Sbjct: 113 DRDLSDEAPELCNQPLHCDYNEYACSKSAQCVPLFKFCDGKRDCS 157
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 109/260 (41%), Gaps = 73/260 (28%)
Query: 169 ELRCGSSNQCVALSKF------------------------------------------CD 186
E C +S +CV S CD
Sbjct: 930 EFTCLNSKKCVPKSNLCDGDDDCGDGSDEDANGICKDYKCVGNKFQCDGTTCLPMEFICD 989
Query: 187 GKPDCSNGEDE-------GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-- 237
GK DC +G DE P +C+ QF C KCI +S +C+G +C ++G+DE
Sbjct: 990 GKSDCYDGTDELEKICKKAPI--VKCSVSQFQCSKTKCIIKSKRCNGVQEC-DNGADEED 1046
Query: 238 -PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNG-Q 294
P + + C + +C + CI + +CD +M C +D DE+ ++ +C G Q
Sbjct: 1047 CPRSKL--CDPDEFRCG-TGLCIKQSQVCDGKMQC-----LDGLDEEHCNEEEKCLQGRQ 1098
Query: 295 VQCALSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQ 352
+CA K C+ + CD DC D++DE + +++ C N+ C + +
Sbjct: 1099 FRCANGKSTCLDLIFRCDGVADCE-----DSSDESDEFCKGNSSSTCGKMNQFMC-ADGK 1152
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ + CDG PDC GEDE
Sbjct: 1153 CLRSFQLCDGFPDCLTGEDE 1172
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 172 CGSSNQCVALS-KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
C QC+ +S CDG DC +G DE P + G++ C G+CI S +CDG DC
Sbjct: 3844 CDDKKQCLDVSTALCDGIRDCFDGSDENPIHCKDMCKGKYRCTNGRCIDVSARCDGRDDC 3903
Query: 231 LEDGSDEPNTCIHQC 245
DGSDE +TC +C
Sbjct: 3904 -GDGSDE-DTCGAEC 3916
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 29/54 (53%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
C NE C S QCV L KFCDGK DCS+G DE C+ E SC G +
Sbjct: 130 CDYNEYACSKSAQCVPLFKFCDGKRDCSDGSDEHSMCHVEDPKTADSCEYGAAM 183
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 103/299 (34%), Gaps = 52/299 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+ G R +V +++ L ID + + LY+ DS + DGSH ++
Sbjct: 2468 IERVYFSGFKRDQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKISRCDFDGSHRELVVSN 2527
Query: 166 ------HPNELRCGS---------SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
HP EL V ++K N + P +
Sbjct: 2528 TDIPSIHPFELSIYDDEIIFTDWVRRSVVGVNKITGSDNRNINRATDVPVGLVVVDTKRE 2587
Query: 211 SCGMGKCIPESWKCDGFVDCLEDG------------SDEPNTCI-----HQCFNGQVQCA 253
C C KC+ + + +G + + TC +C + +C
Sbjct: 2588 YCTSDACADNELKCEDYCRLMANGQASCACNGERRLNSDNRTCTGEFDGKKCAENEFKCL 2647
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
S +CI + CD DC + D+ D + C G C + CIP +C+
Sbjct: 2648 HSDRCIRYEDTCDRYNDCP---MFDDEDTKYCSTRVCRPGYFNCG-NGLCIPEQKVCNRI 2703
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC+ + + C+ NE RC S C+ C+ DC++ DE
Sbjct: 2704 NDCAN-------------FADESNCTCNENEFRC-QSGACIPSKARCNHMQDCNDASDE 2748
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 125/316 (39%), Gaps = 77/316 (24%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF------SCGMGKCIPESWKCDGFVD 229
N CV CDGK C++G DE C Q CG + CDG VD
Sbjct: 3703 NSCVHADDLCDGKKKCNDGSDED---EEACVIKQLLEKENRKCG-------GFACDGIVD 3752
Query: 230 CLEDGSDE---PNTCIHQCFN------GQVQCALSK------------------KCIPHN 262
C EDGSDE P+ H N G + C+ K + I
Sbjct: 3753 C-EDGSDEKGCPDLECHLASNKSLICDGTIDCSSGKDENNCHNNGESNFFQCSMQTIKEW 3811
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI-PHNWLCDEEMDCSTDDI 321
+CD DC+ D + ++ + + +CF C K+C+ LCD DC
Sbjct: 3812 QVCDGRWDCA-DGLDESPEMCASRKARCFRIGY-CDDKKQCLDVSTALCDGIRDC----- 3864
Query: 322 VDNTDEDWDKYFSHNAVLCH---PNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF 375
D +DE N + C + RC ++ +C+ +S CDG+ DC +G DE G
Sbjct: 3865 FDGSDE--------NPIHCKDMCKGKYRC-TNGRCIDVSARCDGRDDCGDGSDEDTCGAE 3915
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC-LIDGSCDQTCTNTHL 434
C++ C KC + T R C C G K D +EC + S + TN +
Sbjct: 3916 CHHFGVCAQ-KCWMAFNHTAR---CHCAPGYARTKN---DENECEPLSKSAEMFITNGNR 3968
Query: 435 SYVCSC--TEGYTLRP 448
++ S ++ LRP
Sbjct: 3969 LHLMSLENSQVSVLRP 3984
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 24/122 (19%)
Query: 61 EFNHRNQSLCFIQQQNVSSVRLR-----------CAQINDL-------LNSWDLPAPEIF 102
E + +N+ + F +Q N+ + + IN L L W AP
Sbjct: 4057 ESSEQNRGVLFDRQANIYVAKAKDTSTRTLIVNSTGTINSLAVDPIKRLIFWTTSAPVPR 4116
Query: 103 PLDERLEKAGMH------GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
L L+ + + LV +NI P+S+V+D++ + LYW D T+E+V
Sbjct: 4117 ILSANLDGKPIAQPFKTGSQPHKALVERNIFEPTSMVLDFSNERLYWIDVLKRTIETVSF 4176
Query: 157 DG 158
DG
Sbjct: 4177 DG 4178
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 54/115 (46%), Gaps = 14/115 (12%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM----GKCIPESWK-CDGFVD 229
S Q + + CDG+ DC++G DE P A F G +C+ S CDG D
Sbjct: 3804 SMQTIKEWQVCDGRWDCADGLDESPEMCASRKARCFRIGYCDDKKQCLDVSTALCDGIRD 3863
Query: 230 CLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C DGSDE P C C G+ +C + +CI + CD DC D +DED
Sbjct: 3864 CF-DGSDENPIHCKDMC-KGKYRCT-NGRCIDVSARCDGRDDCG-----DGSDED 3910
>gi|390348468|ref|XP_003727007.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Strongylocentrotus purpuratus]
Length = 709
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/364 (31%), Positives = 153/364 (42%), Gaps = 63/364 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C P++ CG C+ L+ CD DC +G DE C QF+C KC+
Sbjct: 108 TLTCSPSQFSCGPGKNCIPLTWRCDRDVDCPSGADEHNCDALTCASNQFTCNNKKCVTTR 167
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK--CIPHNWLCDEEMDCSTDDIVDN 279
W CDG DC DGSDE N C + +C + CIP+ W CD ++DC D
Sbjct: 168 WVCDGDNDC-GDGSDEINCPSLTCAPDEFECTGHNETTCIPNRWKCDGDIDCR-----DG 221
Query: 280 TDEDW----DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED------- 328
+DE C G QC S +C+ ++W CD E DC D +DED
Sbjct: 222 SDESSTHCSGPTVPCSAGHFQCT-SGECVHNSWKCDGERDC-----FDGSDEDSCPLVTP 275
Query: 329 ----WDKYFSHNAVLCHPNELRCGSSNQC----------------------------VAL 356
++Y N V C P ++ C + QC + +
Sbjct: 276 SPCAANEYQCDNGV-CIPGDVECDGTQQCADGSDEANCNAPAECNPTTHFKCSNSTCLPM 334
Query: 357 SKFCDGKPDCSNGEDE-GPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQ 412
+ C+G P+C N EDE G + +C N CSH C G +C C AG N+TQ
Sbjct: 335 VRVCNGIPECPNNEDEPGQEICGRNECLTNNGGCSHTCLDLAIGHVCTCNAGYTLVNETQ 394
Query: 413 CVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
CVD +EC G C Q C N SY C C E YTL P+ ++ ++
Sbjct: 395 CVDINECKTTLGICSQRCYNLPGSYKCDCDENYTLENVNDRGHCKANPEFGAPKLLIANR 454
Query: 472 VDIR 475
DIR
Sbjct: 455 HDIR 458
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 146/341 (42%), Gaps = 71/341 (20%)
Query: 163 VLCHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+ C E C S + C+ CDG DC +G DE C+P QFSCG GK
Sbjct: 63 LTCSSAEFECVGSGAGNGGSTCIPARWRCDGDSDCPDGSDEIACQTLTCSPSQFSCGPGK 122
Query: 217 -CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP +W+CD VDC G+DE N C + Q C +KKC+ W+CD + DC
Sbjct: 123 NCIPLTWRCDRDVDC-PSGADEHNCDALTCASNQFTCN-NKKCVTTRWVCDGDNDCG--- 177
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKK--CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C + +C + CIP+ W CD ++DC D +DE +
Sbjct: 178 --DGSDEINCPSLTCAPDEFECTGHNETTCIPNRWKCDGDIDCR-----DGSDES-STHC 229
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNNKADCENL 385
S V C +C +S +CV S CDG+ DC +G DE P N+ C+N
Sbjct: 230 SGPTVPCSAGHFQC-TSGECVHNSWKCDGERDCFDGSDEDSCPLVTPSPCAANEYQCDNG 288
Query: 386 KC---------SHKCSPTPRGAMCFCPAGQNP------NKTQCV---------------- 414
C + +C+ A C PA NP + + C+
Sbjct: 289 VCIPGDVECDGTQQCADGSDEANCNAPAECNPTTHFKCSNSTCLPMVRVCNGIPECPNNE 348
Query: 415 --------DADECLI-DGSCDQTCTNTHLSYVCSCTEGYTL 446
+ECL +G C TC + + +VC+C GYTL
Sbjct: 349 DEPGQEICGRNECLTNNGGCSHTCLDLAIGHVCTCNAGYTL 389
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 75/174 (43%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS------KKC 258
C QF C KCIP WKCD DC D SDE C + + +C S C
Sbjct: 26 CGENQFRCDNNKCIPSVWKCDNEDDC-GDNSDETVCGQLTCSSAEFECVGSGAGNGGSTC 84
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP W CD + DC D +DE + C Q C K CIP W CD ++DC +
Sbjct: 85 IPARWRCDGDSDCP-----DGSDEIACQTLTCSPSQFSCGPGKNCIPLTWRCDRDVDCPS 139
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N D A+ C N+ C ++ +CV CDG DC +G DE
Sbjct: 140 GADEHNCD----------ALTCASNQFTC-NNKKCVTTRWVCDGDNDCGDGSDE 182
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+AGM+G+ R+ +VT+ + WP+ L +DY D+LYW D+ +++ V G + V+
Sbjct: 587 IERAGMNGQGRTAIVTEGVSWPNGLTLDYTLDMLYWIDAKESSISCVDFMGGNRRVV 643
>gi|171362739|dbj|BAG14342.1| vitellogenin receptor [Haemaphysalis longicornis]
Length = 1781
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 153/361 (42%), Gaps = 52/361 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN+ C +S C CDG+ DC GEDE N C G C G+CIP + C
Sbjct: 950 CTPNQFTC-TSGGCTPFLWRCDGEKDCPAGEDELNCGNIRCPNGHDRCANGQCIPHDYWC 1008
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI----- 276
DG DC D SDE N T CF C + +C+ CD + DC STD++
Sbjct: 1009 DGHADC-TDSSDERNCTEPSDCFPDDFHCK-NGQCLDKRLRCDHDEDCEDSTDELGCDYG 1066
Query: 277 -----------VDNTD-------EDWDKFHQCFNG--------------QVQCALSKKCI 304
+D D + D F C +G Q C +K+CI
Sbjct: 1067 KSNKSKCVHGMIDCGDGHCIYAHDLCDGFADCHSGRDESNCTSAICHSAQFFCPYTKRCI 1126
Query: 305 PHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+WLCD + DC + D+++ + C +E RCGS +C+ S+ CD
Sbjct: 1127 LQSWLCDGDDDCGDNMDELLPICHPTTPSPIATTDSACWSDEFRCGS-KECIPWSRVCDM 1185
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420
DC++ DE C N C+H C +P G C C G N + C D DEC
Sbjct: 1186 HLDCADYSDESSHCETHCGTANGGCAHICRESPLGPQCSCHPGYRLNADSKACDDVDECG 1245
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G C C N+ SY C+C +GY+L D +SC Q A +++ IR +
Sbjct: 1246 TPGHCSHFCQNSKGSYKCTCADGYSLAADHRSCKV----QHGEAFLLYMLPNQIRSFSMR 1301
Query: 481 G 481
G
Sbjct: 1302 G 1302
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 107/235 (45%), Gaps = 21/235 (8%)
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 200
+YWCD + ++ + + +A C ++ C ++ C+ + CDG DC + DE
Sbjct: 888 IYWCDGRQDCPDNAD-EKACDAATCPSDDFSC-ANGHCIGKAYHCDGYDDCGDHSDEKNC 945
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
CTP QF+C G C P W+CDG DC G DE N +C NG +CA + +CIP
Sbjct: 946 TRQTCTPNQFTCTSGGCTPFLWRCDGEKDC-PAGEDELNCGNIRCPNGHDRCA-NGQCIP 1003
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKF---HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
H++ CD DC+ N E D F C NGQ C+ CD + DC
Sbjct: 1004 HDYWCDGHADCTDSSDERNCTEPSDCFPDDFHCKNGQ--------CLDKRLRCDHDEDCE 1055
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D+TDE Y N C + CG C+ CDG DC +G DE
Sbjct: 1056 -----DSTDELGCDYGKSNKSKCVHGMIDCG-DGHCIYAHDLCDGFADCHSGRDE 1104
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 96/208 (46%), Gaps = 20/208 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+EL C + C+A +CDG+ DC + DE A C FSC G CI +++ C
Sbjct: 873 CRPHELPC--AGVCIAAIYWCDGRQDCPDNADEKACDAATCPSDDFSCANGHCIGKAYHC 930
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG+ DC D SDE N C Q C S C P W CD E DC + DE
Sbjct: 931 DGYDDC-GDHSDEKNCTRQTCTPNQFTCT-SGGCTPFLWRCDGEKDCPAGE-----DELN 983
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+C NG +CA + +CIPH++ CD DC+ N E D C P++
Sbjct: 984 CGNIRCPNGHDRCA-NGQCIPHDYWCDGHADCTDSSDERNCTEPSD---------CFPDD 1033
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ CD DC + DE
Sbjct: 1034 FHC-KNGQCLDKRLRCDHDEDCEDSTDE 1060
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 116/285 (40%), Gaps = 45/285 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCI 259
EC G F CG +CI W+ DG DC GS + T H+C + + C C+
Sbjct: 23 ECQRGWFDCGNDRCISMFWRWDGQNDC---GSHKDETGCGDHAHRCRSDKYACRDGSYCV 79
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
W+CD E DC D+ DE C + + +CIP++W C DC+
Sbjct: 80 AEIWVCDGEADCH-----DSCDELDCHSSNCTGYRCH---NIECIPNHWHCVVTEDCADA 131
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
V N + A C ++ R QC+ SK CDG+ DCS G
Sbjct: 132 SDVLNCHAATYSSTTTVAPRCRVDQGRYPCLDGQCLLRSKVCDGRKDCSEG--------- 182
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLS 435
C G+ C+C G + C D DEC ++ C CTN+ S
Sbjct: 183 ------------CFVATNGSTCYCNTGFGLMADHISCADVDECAVEPYVCSHGCTNSPGS 230
Query: 436 YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
Y C C EGY L D C A +D +++S+T + R + L
Sbjct: 231 YSCHCLEGYQL-ADKCFCKA----RDPEPRLLYSNTKEFRGLWLR 270
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
ND L W + + +E+A M G R+ L+T I WP S+ +D ++YW D++
Sbjct: 1408 NDGLMFWAVWMDVVRQPHGLIERANMDGTARTILLTDKILWPCSVTVDAVHKLIYWADAN 1467
Query: 148 LNTVESVRVDG-SHNAVL 164
N +ES DG + N VL
Sbjct: 1468 KNILESATYDGKNRNTVL 1485
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
M G N LV+ + WP+ L +D+ + LYWCD+ L+ ++ + + AV+
Sbjct: 400 MDGTNVGQLVSTDRGWPNGLTLDHTTNRLYWCDAKLSRLQYLELSTLRRAVV 451
>gi|195395738|ref|XP_002056491.1| GJ10197 [Drosophila virilis]
gi|194143200|gb|EDW59603.1| GJ10197 [Drosophila virilis]
Length = 1071
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/369 (28%), Positives = 147/369 (39%), Gaps = 63/369 (17%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
A C P+E C S +CV L+ CD DCS+G DE CN C +++CG G+CI
Sbjct: 262 KARTCSPDEYSCKSGEGECVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEYTCGNGRCIQ 320
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ W CD DC DGSDE + + C + CI W+CD + DC
Sbjct: 321 KRWVCDHDNDC-GDGSDERDCPVVPCDAVAEHTCPNGACIAKRWVCDGDPDCPDASDERA 379
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
C + QC C+ H+W+CD + DC D D + S V
Sbjct: 380 CANSTKLVTPCLPHEYQCKDRITCLHHSWVCDGDRDCP--------DGDDEHASSCKNVT 431
Query: 340 CHPNELRCG-------------------------------------------SSNQCVAL 356
C P++ +C QC+AL
Sbjct: 432 CRPDQFQCSDRSCIAGHLTCNGQADCADGSDERDCKLAAPPKSCNASSHFDCGGGQCIAL 491
Query: 357 SKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT--Q 412
SK CD + DC +GEDE G N+ +N C H+C G C C G ++
Sbjct: 492 SKVCDKRKDCPDGEDEPAGKCGQNECSAKNGGCMHRCVDHLVGYSCDCHEGYKLSEDGHS 551
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSST 471
C D +EC G C Q C N + C C GY P + C A + AS++ +
Sbjct: 552 CDDVNECERPGVCSQICVNEIGGFKCECEAGYMRDPRNHTRCKAT----EGHASLLLARR 607
Query: 472 VDIRRIHLN 480
DIR+I L+
Sbjct: 608 HDIRKIALD 616
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 120/275 (43%), Gaps = 41/275 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C + + C+ + CDG DC + DE F A C+ F C G CIP
Sbjct: 143 CDEKQFQCQNGD-CIPIRFVCDGDADCKDHSDEQVEECKFREATCSSDHFRCTNGNCIPN 201
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC DGSDE C ++C N + +C ++CIP NWLCD DC D
Sbjct: 202 KWRCDQENDC-SDGSDEDKMLCRNECPNNEFKCTTVEQCIPRNWLCDGSNDCR-----DK 255
Query: 280 TDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-A 337
+DE K C + C + +C+P W+CD+ DCS D +DE HN
Sbjct: 256 SDEAQCKARTCSPDEYSCKSGEGECVPLAWMCDQSKDCS-----DGSDE-------HNCN 303
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C +E CG + +C+ CD DC +G DE DC + C T
Sbjct: 304 QTCRSDEYTCG-NGRCIQKRWVCDHDNDCGDGSDE-------RDCPVVPCDAVAEHT--- 352
Query: 398 AMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNT 432
CP G K D D D S ++ C N+
Sbjct: 353 ----CPNGACIAKRWVCDGDPDCPDASDERACANS 383
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 88/175 (50%), Gaps = 21/175 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCI 259
A+C QF C G CIP + CDG DC + ++ C + C + +C + CI
Sbjct: 141 AKCDEKQFQCQNGDCIPIRFVCDGDADCKDHSDEQVEECKFREATCSSDHFRCT-NGNCI 199
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
P+ W CD+E DCS D +DED ++C N + +C ++CIP NWLCD DC
Sbjct: 200 PNKWRCDQENDCS-----DGSDEDKMLCRNECPNNEFKCTTVEQCIPRNWLCDGSNDCR- 253
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDE 372
D +DE K A C P+E C S +CV L+ CD DCS+G DE
Sbjct: 254 ----DKSDEAQCK-----ARTCSPDEYSCKSGEGECVPLAWMCDQSKDCSDGSDE 299
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 739 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 798
Query: 167 PNEL 170
E
Sbjct: 799 STEY 802
>gi|348505126|ref|XP_003440112.1| PREDICTED: very low-density lipoprotein receptor [Oreochromis
niloticus]
Length = 844
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 115/362 (31%), Positives = 153/362 (42%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ S QC+ + CDG+ DC NGEDE N C P +F+C G+CI ++
Sbjct: 110 CRMNEFSCGAGSTQCIPVFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCISRNFV 169
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDEEMDCSTDDIVDNTD 281
C+G DC DGSDE C + QC S CIP +W D + +D+ +
Sbjct: 170 CNGEDDC-GDGSDEVECAPSSCGPSEFQCGNS-SCIPASWVCDDDVDCQDQSDESPSHCG 227
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + C
Sbjct: 228 RHPTPPAKCSPSEMQCR-SGECIHKKWRCDGDSDCK-----DGSDE-----ANCPVRTCG 276
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
++ +C N C+ S+ C+G DC++G DE GP C
Sbjct: 277 SDQFKCDDGN-CILGSRQCNGLRDCADGSDEANCRNMTQCNGPEKFKCRSGECIEMSKVC 335
Query: 377 NNKADC------------------ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDAD 417
N DC N CSH C G C C P Q + C D D
Sbjct: 336 NKVRDCPDWSDEPIKECNFNECLLNNGGCSHICKDMVIGYECDCTPGLQLIDHKTCGDID 395
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC+ G C Q C N Y C C GY + P C AV EP +IF++ DIRR+
Sbjct: 396 ECMNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDIRRL 451
Query: 478 HL 479
L
Sbjct: 452 GL 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +CG+ +C+ CDG DCS+G DE C F C G+C+P+ W C
Sbjct: 30 CEANQFQCGNG-RCIPSVWQCDGDEDCSDGSDENSCVKKTCAEVDFVCDNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE H C + C A S +CIP W CD E DC DN +
Sbjct: 89 DGEPDC-EDGSDESLDICHMRTCRMNEFSCGAGSTQCIPVFWKCDGEKDC------DNGE 141
Query: 282 EDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
++ + + C + CA S +CI N++C+ E DC D +DE C
Sbjct: 142 DEVNCGNITCAPNEFTCA-SGRCISRNFVCNGEDDCG-----DGSDE-----VECAPSSC 190
Query: 341 HPNELRCGSSN 351
P+E +CG+S+
Sbjct: 191 GPSEFQCGNSS 201
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 14 LSKKCIPHNWLCDEEMDCST-DDIVDNTDE------DW---DKYFKRILNGTHTLAL-EF 62
L +K I ++ L D+ +D T ++DN DW + Y+ + GT T+++ F
Sbjct: 485 LGQKAI-YSTLLDKRVDVGTHKKVIDNVQTPVGIAVDWIYKNLYWSDL--GTKTISVASF 541
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSP 120
N Q + F + + ++ L + W PA ++EK+GM+G +R
Sbjct: 542 NGTKQKVLFNRGLK-EPADIAVDPLSGFLYWSDWGEPA--------KIEKSGMNGVDRQV 592
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVL 164
LV +IQWP+ + +D + LYW DS L+ + SV ++G + N VL
Sbjct: 593 LVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRNKVL 637
>gi|126332714|ref|XP_001369900.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Monodelphis domestica]
Length = 1947
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P C+ E +F C G+
Sbjct: 187 CSEKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCSLE----EFQCAYGR 241
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 242 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 296
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 297 --DQSDERNCTTSMCTAEQFRCK-SGRCVRLSWRCDGEDDCS-----DNSDEE--NCENT 346
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ CG+ +C+ K C+G DC + DE P N + + N C+
Sbjct: 347 GSPQCASDQFLCGN-GRCIGQRKLCNGVNDCGDSSDESPQQNCRPRTGQENCNVNNGGCA 405
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 406 QKCQMVRGAVQCTCHTGYRLMEDGRSCQDVNECEEEGYCSQGCTNSDGAFQCWCEAGYEL 465
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 466 RPDRRSCKALG---PEPV-LLFANRIDIRQV 492
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 83 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 141
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + +C
Sbjct: 142 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSEKEFRC 194
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 195 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 219
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 922 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 979
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1459 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1515
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
FP ++E++ + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1516 AAFPRKGYLFWTDWGHLAKIERSNLDGSERKLLINTDLGWPNGLTLDYDTRRIYWVDAHL 1575
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1576 DRIESADLNGKLRQVLVSHVSHPFAL 1601
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1230 KLERAGMDGSDRAVLINNNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANRRTLVS 1289
Query: 167 P 167
P
Sbjct: 1290 P 1290
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 529 DRILRANLNGSNVEEVVSTGLESPGGLAVDWLHDKLYWTDSGTSRIEVANLDGAHRKVLL 588
Query: 166 HPN 168
N
Sbjct: 589 WQN 591
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGS+ +
Sbjct: 617 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGSNRKAV 674
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1448 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1504
>gi|144225271|emb|CAM84315.1| very low-density lipoprotein receptor precursor [Solea
senegalensis]
Length = 848
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 162/357 (45%), Gaps = 54/357 (15%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ + QC+ + CDG+ DC +GEDE N C P +F+C G+CI ++
Sbjct: 112 CRVNEFSCGAGTTQCIPVFWKCDGEKDCDSGEDEFNCGNITCAPHEFTCSSGRCISRNFV 171
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC D SDE + C Q +C S CIP +W+CD+++DC +D+
Sbjct: 172 CNGEDDC-GDASDEVDCSPSSCGPSQFRCGNSTSCIPVSWVCDDDVDCQDQSDESPSRCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------- 316
+C + ++QC S +CI W CD + DC
Sbjct: 231 RPPTPPTKCSSTEMQCR-SGECIHRKWRCDGDPDCRDGSDETNCPTRTCGPEQFKCDDGK 289
Query: 317 ---------STDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDC 366
S D D +DE N CH P++ +C S +C+ ++K C+ DC
Sbjct: 290 CIVGSRQCNSVRDCADGSDE----VNCKNMTQCHGPDKFKC-RSGECIEMNKVCNKVRDC 344
Query: 367 SNGEDEGPF--CN-NKADCENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLID 422
+ DE P CN N+ N CSH C G +C C P Q + C D +ECL
Sbjct: 345 PDWSDE-PINECNVNECLLNNGGCSHICKDMVIGFVCDCTPGLQLIDHKTCGDINECLNP 403
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G C Q C N Y C C GY + P C AV EP +IF++ DIRR+ L
Sbjct: 404 GICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDIRRLGL 456
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 33/202 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +CG+ +C+ CDG DCS+G DE C F C G+C+P+ W+C
Sbjct: 32 CEASQFQCGNG-RCIPSVWQCDGDEDCSDGSDESSCVKKTCAELDFVCHNGQCVPKRWQC 90
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE P C + C + C A + +CIP W CD E DC D
Sbjct: 91 DGEPDC-EDGSDESPQICHMRTCRVNEFSCGAGTTQCIPVFWKCDGEKDC---------D 140
Query: 282 EDWDKFHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D+F+ G + CA S +CI N++C+ E DC D +DE
Sbjct: 141 SGEDEFN---CGNITCAPHEFTCSSGRCISRNFVCNGEDDCG-----DASDE-----VDC 187
Query: 336 NAVLCHPNELRCGSSNQCVALS 357
+ C P++ RCG+S C+ +S
Sbjct: 188 SPSSCGPSQFRCGNSTSCIPVS 209
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
EC QF CG G+CIP W+CDG DC DGSDE + C C + +C+P
Sbjct: 30 TECEASQFQCGNGRCIPSVWQCDGDEDC-SDGSDESSCVKKTCAELDFVCH-NGQCVPKR 87
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD E DC D +DE H C + C A + +CIP W CD E DC +
Sbjct: 88 WQCDGEPDCE-----DGSDESPQICHMRTCRVNEFSCGAGTTQCIPVFWKCDGEKDCDSG 142
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE F+ + C P+E C SS +C++ + C+G+ DC + DE
Sbjct: 143 E-----DE-----FNCGNITCAPHEFTC-SSGRCISRNFVCNGEDDCGDASDE 184
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 54 GTHTLAL-EFNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT T+++ FN Q + F + + +S+ + + W PA ++EKA
Sbjct: 535 GTKTISVTNFNGTKQKVLFNRGLKEPASIAVDPLSGFVYWSDWGEPA--------KIEKA 586
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VL 164
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + L
Sbjct: 587 GMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYL 646
Query: 165 CHPNEL 170
HP L
Sbjct: 647 AHPFAL 652
>gi|195395736|ref|XP_002056490.1| GJ10198 [Drosophila virilis]
gi|194143199|gb|EDW59602.1| GJ10198 [Drosophila virilis]
Length = 1019
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/369 (30%), Positives = 158/369 (42%), Gaps = 71/369 (19%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P+E C S + +C+ L+ CD DCS+G DE CN C +F+C +CI
Sbjct: 260 CSPDEFACKSGDGECIPLAWMCDQNKDCSDGSDEAT-CNTTCRSDEFTCSNSRCIQKRWV 318
Query: 219 -----------------------------------PESWKCDGFVDCLEDGSDEPN---- 239
+SW CDG DC DG DE +
Sbjct: 319 CDHDDDCGDGSDELNCPKVVCPPNKSFTCSNDACISKSWVCDGEPDC-PDGGDERDCGIV 377
Query: 240 -TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQVQ 296
+ C + QC C+ H+WLCD + DC D++V N K C Q Q
Sbjct: 378 GQTVTPCLPHEFQCRDRITCLHHSWLCDGDRDCPDGDDELVSNC-----KNVTCRPDQFQ 432
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVA 355
C + CI + C+ + DC+ D +DE D + S C+ ++ CG QC+
Sbjct: 433 CG-DRSCIAGHLTCNGQADCA-----DGSDER-DCHLSAQIKSCNATSQFECGG-GQCIP 484
Query: 356 LSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKT 411
L K CD + DC +GEDE G N+ D +N C H+C P G C C G +
Sbjct: 485 LDKVCDKRKDCPDGEDEPAGKCDINECDTKNGGCMHRCVDHPVGYSCECHEGYKLASDGH 544
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
CVD DEC G C Q C N S+ C C GY D ++ T + AS++ +
Sbjct: 545 HCVDIDECEEPGVCSQICVNEIGSFKCECEAGYMR--DSRNHTRCKAAEGH-ASLLLARR 601
Query: 472 VDIRRIHLN 480
DIR+I L+
Sbjct: 602 QDIRKISLD 610
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 146/385 (37%), Gaps = 99/385 (25%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + RC S +C+ + CDG DC + DE F + C QF C G CIP
Sbjct: 174 YCEEKQFRCRESGECIPIRFVCDGDTDCKDHSDELLEQCKFTESTCGVEQFRCNNGNCIP 233
Query: 220 ESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALS-KKCIPHNWLCDEEMDCS--TD 274
W+CD DC DGSDE P+ C + C + C +CIP W+CD+ DCS +D
Sbjct: 234 NKWRCDRESDC-ADGSDEAPSQCKSKSCSPDEFACKSGDGECIPLAWMCDQNKDCSDGSD 292
Query: 275 DIVDNTDEDWDKFHQCFNGQ-------------------------VQCALSKK------- 302
+ NT D+F C N + V C +K
Sbjct: 293 EATCNTTCRSDEF-TCSNSRCIQKRWVCDHDDDCGDGSDELNCPKVVCPPNKSFTCSNDA 351
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CI +W+CD E DC D DE C P+E +C C+ S CDG
Sbjct: 352 CISKSWVCDGEPDCP-----DGGDERDCGIVGQTVTPCLPHEFQCRDRITCLHHSWLCDG 406
Query: 363 KPDCSNGEDE------------------------GPF-CNNKADCENLKCSHKCSPTPR- 396
DC +G+DE G CN +ADC + C + +
Sbjct: 407 DRDCPDGDDELVSNCKNVTCRPDQFQCGDRSCIAGHLTCNGQADCADGSDERDCHLSAQI 466
Query: 397 ------------GAMCF-----------CPAGQNPNKTQCVDADEC-LIDGSCDQTCTNT 432
G C CP G++ +C D +EC +G C C +
Sbjct: 467 KSCNATSQFECGGGQCIPLDKVCDKRKDCPDGEDEPAGKC-DINECDTKNGGCMHRCVDH 525
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVN 457
+ Y C C EGY L DG C ++
Sbjct: 526 PVGYSCECHEGYKLASDGHHCVDID 550
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 24/154 (15%)
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK- 301
H C Q +C S +CIP ++CD + DC D++DE QC + C + +
Sbjct: 173 HYCEEKQFRCRESGECIPIRFVCDGDTDCK-----DHSDE---LLEQCKFTESTCGVEQF 224
Query: 302 -----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN-QCVA 355
CIP+ W CD E DC+ D +DE + S + C P+E C S + +C+
Sbjct: 225 RCNNGNCIPNKWRCDRESDCA-----DGSDEAPSQCKSKS---CSPDEFACKSGDGECIP 276
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
L+ CD DCS+G DE CN + CS+
Sbjct: 277 LAWMCDQNKDCSDGSDEAT-CNTTCRSDEFTCSN 309
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 733 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 792
Query: 167 PNEL 170
E
Sbjct: 793 STEY 796
>gi|144225270|emb|CAI52471.2| very low-density lipoprotein receptor precursor [Solea
senegalensis]
Length = 868
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/357 (32%), Positives = 162/357 (45%), Gaps = 54/357 (15%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ + QC+ + CDG+ DC +GEDE N C P +F+C G+CI ++
Sbjct: 112 CRVNEFSCGAGTTQCIPVFWKCDGEKDCDSGEDEFNCGNITCAPHEFTCSSGRCISRNFV 171
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
C+G DC D SDE + C Q +C S CIP +W+CD+++DC +D+
Sbjct: 172 CNGEDDC-GDASDEVDCSPSSCGPSQFRCGNSTSCIPVSWVCDDDVDCQDQSDESPSRCG 230
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------- 316
+C + ++QC S +CI W CD + DC
Sbjct: 231 RPPTPPTKCSSTEMQCR-SGECIHRKWRCDGDPDCRDGSDETNCPTRTCGPEQFKCDDGK 289
Query: 317 ---------STDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDC 366
S D D +DE N CH P++ +C S +C+ ++K C+ DC
Sbjct: 290 CIVGSRQCNSVRDCADGSDE----VNCKNMTQCHGPDKFKC-RSGECIEMNKVCNKVRDC 344
Query: 367 SNGEDEGPF--CN-NKADCENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLID 422
+ DE P CN N+ N CSH C G +C C P Q + C D +ECL
Sbjct: 345 PDWSDE-PINECNVNECLLNNGGCSHICKDMVIGFVCDCTPGLQLIDHKTCGDINECLNP 403
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G C Q C N Y C C GY + P C AV EP +IF++ DIRR+ L
Sbjct: 404 GICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDIRRLGL 456
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 99/202 (49%), Gaps = 33/202 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +CG+ +C+ CDG DCS+G DE C F C G+C+P+ W+C
Sbjct: 32 CEASQFQCGNG-RCIPSVWQCDGDEDCSDGSDESSCVKKTCAELDFVCHNGQCVPKRWQC 90
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE P C + C + C A + +CIP W CD E DC D
Sbjct: 91 DGEPDC-EDGSDESPQICHMRTCRVNEFSCGAGTTQCIPVFWKCDGEKDC---------D 140
Query: 282 EDWDKFHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D+F+ G + CA S +CI N++C+ E DC D +DE
Sbjct: 141 SGEDEFN---CGNITCAPHEFTCSSGRCISRNFVCNGEDDCG-----DASDE-----VDC 187
Query: 336 NAVLCHPNELRCGSSNQCVALS 357
+ C P++ RCG+S C+ +S
Sbjct: 188 SPSSCGPSQFRCGNSTSCIPVS 209
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
EC QF CG G+CIP W+CDG DC DGSDE + C C + +C+P
Sbjct: 30 TECEASQFQCGNGRCIPSVWQCDGDEDC-SDGSDESSCVKKTCAELDFVCH-NGQCVPKR 87
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD E DC D +DE H C + C A + +CIP W CD E DC +
Sbjct: 88 WQCDGEPDCE-----DGSDESPQICHMRTCRVNEFSCGAGTTQCIPVFWKCDGEKDCDSG 142
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE F+ + C P+E C SS +C++ + C+G+ DC + DE
Sbjct: 143 E-----DE-----FNCGNITCAPHEFTC-SSGRCISRNFVCNGEDDCGDASDE 184
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 17/126 (13%)
Query: 54 GTHTLAL-EFNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT T+++ FN Q + F + + +S+ + + W PA ++EKA
Sbjct: 535 GTKTISVTNFNGTKQKVLFNRGLKEPASIAVDPLSGFVYWSDWGEPA--------KIEKA 586
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VL 164
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + L
Sbjct: 587 GMNGVDRQVLVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYL 646
Query: 165 CHPNEL 170
HP L
Sbjct: 647 AHPFAL 652
>gi|410973797|ref|XP_003993334.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Felis catus]
Length = 2012
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 255 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 309
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 310 CILDIYHCD-GDDDCGDWSDEADCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 364
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 365 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--DCENT 414
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DEGP N + + N C+
Sbjct: 415 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDEGPQQNCRPRTGEENCNVNNGGCA 473
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 474 QKCQMVRGAVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 533
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 534 RPDRRSCKALG---PEPV-LLFANRIDIRQV 560
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 151 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 209
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 210 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 262
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 263 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 287
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 990 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1047
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R I
Sbjct: 1514 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1573
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1574 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLD 1630
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G VL HP L
Sbjct: 1631 YDTRRIYWVDAHLDRIESSDLNGKLRQVLVSHVSHPFAL 1669
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G+ L
Sbjct: 1298 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLVS 1357
Query: 167 P 167
P
Sbjct: 1358 P 1358
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 597 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 656
Query: 166 HPN 168
N
Sbjct: 657 WQN 659
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 685 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 742
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 904 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 963
Query: 168 N 168
N
Sbjct: 964 N 964
>gi|47214294|emb|CAG00960.1| unnamed protein product [Tetraodon nigroviridis]
Length = 671
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 153/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C PNE C +S +C++ + C+G+ DC +G DE + C P +F CG CIP SW
Sbjct: 125 ITCAPNEFTC-ASGRCISRNFVCNGEDDCGDGSDEVACAPSSCAPSEFQCGNSSCIPASW 183
Query: 223 KCDGFVDCLEDGSDEPNTCIH------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P+ C +C + ++QC S +CI W CD + DC
Sbjct: 184 VCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDRDCK---- 238
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D TDE C Q +C CIP + C+ +C D +DE N
Sbjct: 239 -DGTDEANCPVRTCGLDQFRCD-DGTCIPGSKQCNGLRECP-----DGSDE----LNCKN 287
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C P++ +C S +C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 288 VTQCSGPDKFKC-RSGECIEMSKVCNKVRDCPDWSDE-PIKECNFNECLLNNGGCSHICK 345
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q + C D +ECL G C Q C N Y C C GY + P
Sbjct: 346 DMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTG 405
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIRR+ L
Sbjct: 406 VCKAVG---KEPC-LIFTNRRDIRRLGL 429
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
EC QF CG G+CI W+CDG DC + + N+C+ + C C + +C+P
Sbjct: 4 TECEASQFQCGNGRCILSVWQCDGDDDCTDGSDE--NSCVQKTCAESDFVCQ-NGQCVPK 60
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH--QCFNGQVQC-ALSKKCIPHNWLCDEEMDCST 318
W CD E DC D +DE D H C +V C A S CI W CD E DC
Sbjct: 61 RWHCDGEPDCE-----DGSDESLDICHTRTCRLNEVSCGAGSSNCISVFWKCDGEKDC-- 113
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN +++ + + C PNE C +S +C++ + C+G+ DC +G DE
Sbjct: 114 ----DNGEDE----VNCGNITCAPNEFTC-ASGRCISRNFVCNGEDDCGDGSDE 158
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 74/151 (49%), Gaps = 22/151 (14%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQC-ALSKKCIPH 261
C F C G+C+P+ W CDG DC EDGSDE H C +V C A S CI
Sbjct: 45 CAESDFVCQNGQCVPKRWHCDGEPDC-EDGSDESLDICHTRTCRLNEVSCGAGSSNCISV 103
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E DC DN +++ + + C + CA S +CI N++C+ E DC
Sbjct: 104 FWKCDGEKDC------DNGEDEVNCGNITCAPNEFTCA-SGRCISRNFVCNGEDDCG--- 153
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
D +DE + C P+E +CG+S+
Sbjct: 154 --DGSDE-----VACAPSSCAPSEFQCGNSS 177
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 15/125 (12%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW-DLPAPEIFPL--------DE 106
L LE Q + QQ+N ++ A N + W DL IF +
Sbjct: 425 RRLGLERKEYTQLV--EQQRNAVALD---ADFNQQMIFWADLGQKAIFSVLYWSDWGEPA 479
Query: 107 RLE-KAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E AGM+G +R LV +IQ P+ + +D + LYW DS L+ + SV ++G + +
Sbjct: 480 KIENSAGMNGVDRQVLVASDIQRPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVL 539
Query: 166 HPNEL 170
+E
Sbjct: 540 QSSEY 544
>gi|241695294|ref|XP_002413042.1| vitellogenin receptor, putative [Ixodes scapularis]
gi|215506856|gb|EEC16350.1| vitellogenin receptor, putative [Ixodes scapularis]
Length = 810
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/356 (32%), Positives = 157/356 (44%), Gaps = 73/356 (20%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC--------------------------------- 201
S +C+ ++ CDG+ DC +G DE C
Sbjct: 54 SQECIPITWRCDGQEDCVDGSDEKDECLAATCTHEEFSCNNGKCITKRWVCDQDDDCGDG 113
Query: 202 -------NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI----HQCFNGQV 250
N C+ +F C G+CIP+ W CDG +DCL DGSDE N C +
Sbjct: 114 SDEKGCANVTCSSAEFMCSNGRCIPDRWHCDGDIDCL-DGSDERNCPTTGRPSPCKVREF 172
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
QCA CI +W CD + DC D +DE + + C Q QC + CIP C
Sbjct: 173 QCANGVDCIHTSWQCDGDPDCP-----DESDEA-NCTNTCRPDQFQCR-NLHCIPGLLEC 225
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNG 369
+ +++C D +DED + + C+P+ E CG N C+ CDGK DC
Sbjct: 226 NGKVECP-----DRSDED---HCNTTVNRCNPDTEFDCG-GNHCIPKHLVCDGKNDCGAF 276
Query: 370 EDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGS 424
EDE +K +C + CS C P G C C G N+T C D DECLI GS
Sbjct: 277 EDEPRELCHKNECSTGHSGCSDICKDDPIGFHCECHPGFKLTEDNRT-CDDVDECLIPGS 335
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C Q CTN Y C C EGY P D C A ++ ++F++ DIR+I+L
Sbjct: 336 CSQKCTNYKGGYKCECIEGYVPEPRDRHRCKA----KEGVPFLLFANRNDIRKINL 387
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 95/227 (41%), Gaps = 56/227 (24%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNW 263
C+ +F C G CIP W+CD DC + ++ TC ++ C Q C S++CIP W
Sbjct: 4 CSQTEFRCKNGNCIPSRWQCDNENDCEDKSDEDVVTCSNKTCSEEQFTCK-SQECIPITW 62
Query: 264 LCDEEMDCSTDDIVDNTDEDWD--------KFHQCFNGQ--------------------- 294
CD + DC VD +DE + + C NG+
Sbjct: 63 RCDGQEDC-----VDGSDEKDECLAATCTHEEFSCNNGKCITKRWVCDQDDDCGDGSDEK 117
Query: 295 ----VQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
V C+ ++ +CIP W CD ++DC +D +DE + + C E
Sbjct: 118 GCANVTCSSAEFMCSNGRCIPDRWHCDGDIDC-----LDGSDER-NCPTTGRPSPCKVRE 171
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCENLKC 387
+C + C+ S CDG PDC + DE N ++ C NL C
Sbjct: 172 FQCANGVDCIHTSWQCDGDPDCPDESDEANCTNTCRPDQFQCRNLHC 218
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++GM G +RS +VT +I WP+ L ID+ L+W D+ L+ + S +G++ V+
Sbjct: 511 KIERSGMDGSHRSAIVTTDILWPNGLAIDFVSKQLFWVDAKLHLIGSSDYNGNNRRVI 568
>gi|148695617|gb|EDL27564.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Mus musculus]
Length = 1911
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1434 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1490
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1491 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1550
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1551 LNGKLRQVLVSHVSHPFAL 1569
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 109 EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1417 RRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1472
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD ++ D + + +A G + +V +++ P+ L ID+ + LYW D+ +
Sbjct: 780 WDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDR 839
Query: 151 VESVRVDGSHNAVLCHPN 168
+E DGS VL N
Sbjct: 840 IEVANTDGSMRTVLIWEN 857
>gi|410927828|ref|XP_003977342.1| PREDICTED: very low-density lipoprotein receptor-like isoform 1
[Takifugu rubripes]
Length = 844
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 152/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C PNE C +S +C++ + C+G+ DCS+G DE + C P +F CG CIP SW
Sbjct: 149 VTCAPNEFTC-ASGRCISRNFVCNGEDDCSDGSDELDCAPSSCAPSEFQCGNSSCIPASW 207
Query: 223 KCDGFVDCLEDGSDEPNTCIH------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P+ C +C + ++QC S +CI W CD + DC
Sbjct: 208 VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDRDCK---- 262
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D TDE C Q +C CI + C+ DC+ D +DE N
Sbjct: 263 -DGTDEANCPVRSCGLDQFRCD-DGSCIQGSRQCNGLRDCA-----DGSDE----VNCKN 311
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C P + +C S C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 312 VTQCSGPEKFKC-RSGDCIEMSKVCNKVRDCPDWSDE-PIKECNVNECLLNNGGCSHICK 369
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q + C D +ECL G C Q C N Y C C GY + P
Sbjct: 370 DMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTG 429
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIRR+ L
Sbjct: 430 VCKAVG---KEPC-LIFTNRRDIRRLGL 453
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
RVD C ++ +CG+ +C+ CDG+ DC++G DE C F C
Sbjct: 20 RVDVHGTKTECEASQFQCGNG-RCILSVWQCDGEDDCTDGSDENSCVKKTCAETDFVCHN 78
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+C+P+ W CDG DC EDGSDE H C +V C S CIP W CD E DC
Sbjct: 79 GQCVPKRWHCDGEPDC-EDGSDESLDICHTRTCRLNEVSCGTGSTLCIPVFWKCDGEKDC 137
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DN +++ + C + CA S +CI N++C+ E DCS D +DE
Sbjct: 138 ------DNGEDEVNCGNVTCAPNEFTCA-SGRCISRNFVCNGEDDCS-----DGSDE--- 182
Query: 331 KYFSHNAVLCHPNELRCGSSN 351
C P+E +CG+S+
Sbjct: 183 --LDCAPSSCAPSEFQCGNSS 201
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EK+GM+G +R LV ++QWP+ + +D + LYW DS L+ + SV ++G + +
Sbjct: 579 KIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQ 638
Query: 167 PNE 169
+E
Sbjct: 639 SSE 641
>gi|224994223|ref|NP_766256.3| low-density lipoprotein receptor-related protein 4 isoform 1
precursor [Mus musculus]
gi|239938881|sp|Q8VI56.3|LRP4_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=LDLR dan; Flags: Precursor
gi|124297915|gb|AAI32241.1| Low density lipoprotein receptor-related protein 4 [Mus musculus]
Length = 1905
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD ++ D + + +A G + +V +++ P+ L ID+ + LYW D+ +
Sbjct: 780 WDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDR 839
Query: 151 VESVRVDGSHNAVLCHPN 168
+E DGS VL N
Sbjct: 840 IEVANTDGSMRTVLIWEN 857
>gi|224058239|ref|XP_002193782.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Taeniopygia guttata]
Length = 1035
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 145/326 (44%), Gaps = 34/326 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S+ C+++ CDG DC +G DE C P +F C CIPE W C
Sbjct: 265 CSPNEFQC-SNKSCISIIFVCDGDNDCGDGSDERKCSPLTCNPSEFQCNNSVCIPELWVC 323
Query: 225 DGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D DC ED SDE ++ C + QC + +CI NW CD + DC
Sbjct: 324 DNQPDC-EDQSDESVEKCGYDAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDCK----- 376
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C + QC CI CD+ DC DN+DE +
Sbjct: 377 DKSDEQDCPLVTCQPDEFQCG-DGACIHGAKQCDKVRDCP-----DNSDE---AGCVQES 427
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPT 394
P++ +C S +C+ K CD DC + DE P + N+ N CSH C
Sbjct: 428 ACESPSKFQC-KSGECIDGGKVCDSHRDCRDWSDE-PLKDCGVNECSMNNGGCSHICKDL 485
Query: 395 PRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C CP G +K C D DEC +C Q C N Y C C EGY + K+C
Sbjct: 486 KIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNC 545
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHL 479
AV + +IF++ ++R+I L
Sbjct: 546 KAVG----KSPYLIFTNRHEVRKIDL 567
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 106/375 (28%), Positives = 147/375 (39%), Gaps = 92/375 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +C + +C+ CD DCS+ DE C F+C G CIP WKC
Sbjct: 145 CEENQFQC-RNERCIPAIWKCDEDDDCSDNSDEADCPKKTCAESDFTCDNGHCIPARWKC 203
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
DG +C DGSDE C Q C + ++ C LS KCIP +W CD + DC +
Sbjct: 204 DGEEEC-PDGSDESEAACTKQVCPSEKISCGDLSNKCIPLSWRCDGQKDCESGIDEAGCT 262
Query: 274 -------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+D D +DE C + QC S CIP W
Sbjct: 263 PACSPNEFQCSNKSCISIIFVCDGDNDCGDGSDERKCSPLTCNPSEFQCNNS-VCIPELW 321
Query: 309 LCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC D +DE +K Y + C +E +CG + +C+ L+ CDG DC
Sbjct: 322 VCDNQPDCE-----DQSDESVEKCGYDAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDC 375
Query: 367 SNGEDEG--PFCNNKAD---CENLKCSHK---------CSPTPRGAMCFCPAG-QNPNKT 411
+ DE P + D C + C H C A C + ++P+K
Sbjct: 376 KDKSDEQDCPLVTCQPDEFQCGDGACIHGAKQCDKVRDCPDNSDEAGCVQESACESPSKF 435
Query: 412 QCVD-------------------ADECLID----------GSCDQTCTNTHLSYVCSCTE 442
QC +DE L D G C C + + Y C C
Sbjct: 436 QCKSGECIDGGKVCDSHRDCRDWSDEPLKDCGVNECSMNNGGCSHICKDLKIGYECECPP 495
Query: 443 GYTLRPDGKSCTAVN 457
GY L D K+C ++
Sbjct: 496 GYKLL-DKKTCGDID 509
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 80/170 (47%), Gaps = 18/170 (10%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP WKCD DC D SDE + C C + CIP W
Sbjct: 144 ECEENQFQCRNERCIPAIWKCDEDDDC-SDNSDEADCPKKTCAESDFTCD-NGHCIPARW 201
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C + ++ C LS KCIP +W CD + DC +
Sbjct: 202 KCDGEEECP--DGSDESEAACTK-QVCPSEKISCGDLSNKCIPLSWRCDGQKDCES---- 254
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + C PNE +C S+ C+++ CDG DC +G DE
Sbjct: 255 -GIDE------AGCTPACSPNEFQC-SNKSCISIIFVCDGDNDCGDGSDE 296
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L NS DL P +D
Sbjct: 626 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNS-DLSEPRAIAVDPTQRFM 684
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
R+EKAG++G R LVT NI+WP+ + +D LYW DS L+++ + +
Sbjct: 685 YWSDWGDKARIEKAGLNGVGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 744
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 745 GSNRKVL 751
>gi|321461614|gb|EFX72644.1| hypothetical protein DAPPUDRAFT_308138 [Daphnia pulex]
Length = 1788
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 105/282 (37%), Positives = 143/282 (50%), Gaps = 33/282 (11%)
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLC 265
C G CI + CD DC D SDE N C + C + CIP NW+C
Sbjct: 4 CKDGHCIAMFFFCDRENDC-GDWSDELNCTGMSSGLTLNCPSNTFHCE-GQVCIPQNWVC 61
Query: 266 DEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D DCS D DE +K +C NG QC K+CI + W+CD DC+ D
Sbjct: 62 DGMDDCS-----DARDELHCNKTTECKNG-FQCG--KECILNQWVCDGVTDCA-----DG 108
Query: 325 TDED--WDKYFSHNAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+DE + F +++ L C S + +C+ +S+ CDG DC + DEG CN+ +
Sbjct: 109 SDEKECGPEAFMNHSCLPEHGWFSCLSKGTQKCMPISRACDGYADCDDRADEGGQCNSTS 168
Query: 381 DCEN-LKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLID-GSCDQTCTNTHLSYVC 438
+C N +C ++C TPRG +C CP+G N T CVD DEC +D C Q C N + C
Sbjct: 169 NCSNSTRCPNECHKTPRGPICSCPSGYQLNGTTCVDIDECSMDPPMCSQKCANNQGGFEC 228
Query: 439 SCTEGYTL-RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
SC+ GYT+ D +SC A N P EP ++ ++ DIR I L
Sbjct: 229 SCSSGYTVGTRDKRSCIA-NGP--EPM-LLITTDRDIRYISL 266
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 131/333 (39%), Gaps = 57/333 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN-----AECTPGQFSCGMGK- 216
+C + C S+ C+ L+ CD DC +GEDE C+ A C C
Sbjct: 991 MCSSTQFYCSHSHICIPLTWVCDRDSDCQHGEDEDSSVCDSVVNKAPCPLNYLRCPQRPD 1050
Query: 217 CIPESWKCDGFVDC-----------LEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWL 264
C+P C+ +C L D E T C + Q C L S +CIP
Sbjct: 1051 CMPRMALCNSIAECEHGTDAELCAKLNDSFVETETEKPDCLSSQYNCFLGSNECIPIASR 1110
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
CD DC+ + + D + C +C + I +W+CD DCS ++
Sbjct: 1111 CDCRFDCTFGEDEEGCD---NLPFSCKKDLFRCPNEMRYINISWVCDGLSDCS-----NS 1162
Query: 325 TDEDWDKYFSHNAVLCHPN------------------ELRCGSSNQCVALSKFCDGKPDC 366
DE +LC N + C S +CV S CDGK DC
Sbjct: 1163 ADE--------ALLLCPANVSTSSSSSTTITPSCSATDFMC-LSGECVQASSVCDGKFDC 1213
Query: 367 SNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGS 424
+G DEG C N +C C P P C C G N QCVD DEC +
Sbjct: 1214 FDGTDEGSGCAKSCQ-NNGQCPQICVPGPMEPTCLCEPGYESLINGKQCVDVDECTFENK 1272
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C NT Y CSC GY+L PD +C A +
Sbjct: 1273 CSQFCNNTKGGYRCSCAPGYSLEPDQITCKAAS 1305
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 91/202 (45%), Gaps = 18/202 (8%)
Query: 178 CVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
C+ CDG DC+ GEDE CT QF C G C+ + CDG DC +D
Sbjct: 878 CIPAKFRCDGVNDCTLGEDELQCRNTTTEVGCTSSQFQCKNGGCVSIHFYCDGDADC-QD 936
Query: 234 GSDEPNTC-IHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQ 289
SDEP++C + C G+ C CIP + +CD + DC +D +DE
Sbjct: 937 RSDEPDSCPPYVCLGEGEYSCPNQHHCIPRSAVCDGQADC-----IDKSDEANCSSTHSM 991
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + Q C+ S CIP W+CD + DC + D++ D N C N LRC
Sbjct: 992 CSSTQFYCSHSHICIPLTWVCDRDSDCQHGEDEDSSVCD----SVVNKAPCPLNYLRCPQ 1047
Query: 350 SNQCVALSKFCDGKPDCSNGED 371
C+ C+ +C +G D
Sbjct: 1048 RPDCMPRMALCNSIAECEHGTD 1069
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 98/219 (44%), Gaps = 27/219 (12%)
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP----NTCIHQCFNGQ 249
GED+ A+C ++ CIP ++CDG DC G DE T C + Q
Sbjct: 855 GEDKHVCTTADCVGDEWFKCQTNCIPAKFRCDGVNDCTL-GEDELQCRNTTTEVGCTSSQ 913
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN-GQVQCALSKKCIPHN 307
QC + C+ ++ CD + DC D +DE D + C G+ C CIP +
Sbjct: 914 FQCK-NGGCVSIHFYCDGDADCQ-----DRSDEPDSCPPYVCLGEGEYSCPNQHHCIPRS 967
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+CD + DC +D +DE S +C + C S+ C+ L+ CD DC
Sbjct: 968 AVCDGQADC-----IDKSDE---ANCSSTHSMCSSTQFYCSHSHICIPLTWVCDRDSDCQ 1019
Query: 368 NGEDE-GPFCN---NKADC--ENLKCSHKCSPTPRGAMC 400
+GEDE C+ NKA C L+C + PR A+C
Sbjct: 1020 HGEDEDSSVCDSVVNKAPCPLNYLRCPQRPDCMPRMALC 1058
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL--- 164
+ AGM G R+ ++TK+I WP+ LV+D +YW D+ LN +ES ++DGS +L
Sbjct: 392 IGSAGMDGSQRTNVITKDIIWPNGLVVDETIQRIYWGDAKLNRIESSKIDGSDRKILPVK 451
Query: 165 -CHPNEL 170
HP L
Sbjct: 452 VTHPYAL 458
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 51/101 (50%), Gaps = 18/101 (17%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE---GP--FCNAECTP--GQFSC---GMGKC 217
N +CG +C+ CDG DC++G DE GP F N C P G FSC G KC
Sbjct: 84 NGFQCG--KECILNQWVCDGVTDCADGSDEKECGPEAFMNHSCLPEHGWFSCLSKGTQKC 141
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
+P S CDG+ DC +D +DE C N C+ S +C
Sbjct: 142 MPISRACDGYADC-DDRADEGGQC-----NSTSNCSNSTRC 176
>gi|348520917|ref|XP_003447973.1| PREDICTED: low-density lipoprotein receptor 1-like [Oreochromis
niloticus]
Length = 780
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 184/403 (45%), Gaps = 44/403 (10%)
Query: 97 PAPEIFPLDERLEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSHLNTVE 152
P + P+ +R ++ G+ N S L++++ +Q P D ++ CDS + +
Sbjct: 70 PVSLVTPVKDR-DELGLQVPNLSHLLSEDHLSLVQRPDDTKFDRCIPKIFVCDSDNDCSD 128
Query: 153 SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
D + +A C +E RC +S +C+ CD + DCS+G DE N C P F C
Sbjct: 129 GS--DEASSARTCDDHEFRC-ASGRCIPQIFVCDSENDCSDGSDEASCSNHNCNPHYFQC 185
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-------IHQCFNGQVQCALSKKCIPHNWLC 265
C+P W+CDG DC + + P C +C + QC + CI NW C
Sbjct: 186 NSSMCVPMVWRCDGDRDCDDGSDEWPENCEGRKPEKKTRCQTNEFQCT-NGDCIHGNWKC 244
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
D DC +D +DE C + + QC CI + C+ DC D T
Sbjct: 245 DGGFDC-----LDRSDEANCTHSTCRSDEFQCK-DGSCINKSLQCNGHHDCR-----DFT 293
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC-NNKADCE 383
DE + V PN+ +C S +C+ + K C+ + DC +G DE C NN+
Sbjct: 294 DE-----IECDTVCEGPNKFQC-RSGECIDMEKVCNKQNDCKDGSDEPAKECDNNECLTG 347
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
N CSH C+ G C CPAG N C D DEC +C Q C N SY C C
Sbjct: 348 NGGCSHHCNDLKIGYNCSCPAGYRLKANNKTCEDIDECAEPDTCTQICINLPGSYKCDCG 407
Query: 442 EGYTLRPDGKSCTAVN--VPQDEPASIIFSSTVDIRRIHLNGS 482
EGY + P K+C A + VP ++ F++ ++R++ ++ S
Sbjct: 408 EGYMIDPATKTCKAESGTVP-----TLYFTNRHEVRKLTVDRS 445
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS--HNA 162
+ ++EK+G++G +R+ LV NI WP+ + +D LYW DS L+++ S+ V+G H+
Sbjct: 567 EAKIEKSGLNGADRTTLVKDNIVWPNGITLDMVNQRLYWVDSKLHSLSSIDVNGGARHSL 626
Query: 163 V-----LCHPNEL 170
+ L HP L
Sbjct: 627 IINEEKLSHPLSL 639
>gi|432090393|gb|ELK23819.1| Low-density lipoprotein receptor-related protein 4 [Myotis davidii]
Length = 1909
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 152 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 206
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 207 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 261
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 262 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 311
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N CS
Sbjct: 312 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCS 370
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 371 QKCQMVRGAVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQVCTNSEGAFQCWCEAGYEL 430
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 431 RPDRRSCKALG---PEPV-LLFANRIDIRQV 457
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 73/166 (43%), Gaps = 29/166 (17%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 33 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 91
Query: 238 PN---------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+ T +C + C + CI W CD + DC DN+DE
Sbjct: 92 QDCRPDPTACSSLTALPTAPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDE 145
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D +C + + +C+ CI +W CD + DC D +DE+
Sbjct: 146 QCD-MRKCSDKEFRCS-DGSCIAEHWYCDGDTDCK-----DGSDEE 184
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 887 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 944
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R +N NS D P A +FP
Sbjct: 1431 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVN---NSLDEPRAIAVFPRKG 1487
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1488 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1547
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1548 LNGKLRQVLVSHVSHPFAL 1566
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1195 KLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEVADLNGANRHTLVS 1254
Query: 167 P 167
P
Sbjct: 1255 P 1255
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 494 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 553
Query: 166 HPN 168
N
Sbjct: 554 WQN 556
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 582 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 639
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL +
Sbjct: 1413 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVN 1471
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 801 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 860
Query: 168 N 168
N
Sbjct: 861 N 861
>gi|410927830|ref|XP_003977343.1| PREDICTED: very low-density lipoprotein receptor-like isoform 2
[Takifugu rubripes]
Length = 864
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 152/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C PNE C +S +C++ + C+G+ DCS+G DE + C P +F CG CIP SW
Sbjct: 149 VTCAPNEFTC-ASGRCISRNFVCNGEDDCSDGSDELDCAPSSCAPSEFQCGNSSCIPASW 207
Query: 223 KCDGFVDCLEDGSDEPNTCIH------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P+ C +C + ++QC S +CI W CD + DC
Sbjct: 208 VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDRDCK---- 262
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D TDE C Q +C CI + C+ DC+ D +DE N
Sbjct: 263 -DGTDEANCPVRSCGLDQFRCD-DGSCIQGSRQCNGLRDCA-----DGSDE----VNCKN 311
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C P + +C S C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 312 VTQCSGPEKFKC-RSGDCIEMSKVCNKVRDCPDWSDE-PIKECNVNECLLNNGGCSHICK 369
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q + C D +ECL G C Q C N Y C C GY + P
Sbjct: 370 DMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTG 429
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIRR+ L
Sbjct: 430 VCKAVG---KEPC-LIFTNRRDIRRLGL 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 97/201 (48%), Gaps = 23/201 (11%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
RVD C ++ +CG+ +C+ CDG+ DC++G DE C F C
Sbjct: 20 RVDVHGTKTECEASQFQCGNG-RCILSVWQCDGEDDCTDGSDENSCVKKTCAETDFVCHN 78
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+C+P+ W CDG DC EDGSDE H C +V C S CIP W CD E DC
Sbjct: 79 GQCVPKRWHCDGEPDC-EDGSDESLDICHTRTCRLNEVSCGTGSTLCIPVFWKCDGEKDC 137
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DN +++ + C + CA S +CI N++C+ E DCS D +DE
Sbjct: 138 ------DNGEDEVNCGNVTCAPNEFTCA-SGRCISRNFVCNGEDDCS-----DGSDE--- 182
Query: 331 KYFSHNAVLCHPNELRCGSSN 351
C P+E +CG+S+
Sbjct: 183 --LDCAPSSCAPSEFQCGNSS 201
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++EK+GM+G +R LV ++QWP+ + +D + LYW DS L+ + SV ++G + +
Sbjct: 579 KIEKSGMNGVDRQVLVVSDLQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQ 638
Query: 167 PNE 169
+E
Sbjct: 639 SSE 641
>gi|326925390|ref|XP_003208899.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Meleagris gallopavo]
Length = 877
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 108/335 (32%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+D + A C P+E +C S+ C++++ CDG +C +G DE C+P +F C
Sbjct: 103 IDEAGCAPACSPDEFQC-SNKTCISINFVCDGYNNCGDGSDERKCSPLTCSPNEFQCNNS 161
Query: 216 KCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
CIPE W CD DC ED SDE + C + QC + +CI NW CD +
Sbjct: 162 VCIPELWVCDNQADC-EDHSDESVERCGYDAKAFNTCAAHEFQCG-NGECILLNWKCDGD 219
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + QC CI CD+ DC DN+DE
Sbjct: 220 EDCK-----DKSDEQDCPLVTCRPDEFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE- 267
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENL 385
+ P++ +C S +C+ K CD DC + DE P N+ N
Sbjct: 268 --AGCVQESACESPSKFQC-KSGECIDGGKVCDSHRDCRDWSDE-PLKECGINECSMNNG 323
Query: 386 KCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C G C CP G +K C D DEC +C Q C N Y C C EGY
Sbjct: 324 GCSHICKDLKIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGY 383
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C AV + +IF++ ++R+I L
Sbjct: 384 EMDTLSKNCKAVG----KSPYLIFTNRHEVRKIDL 414
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 131/335 (39%), Gaps = 91/335 (27%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPH 261
C F+C G CIP+ WKCDG +C DGSDE C Q C ++ C LS KCIP
Sbjct: 31 CAESDFACDNGHCIPDRWKCDGEEEC-SDGSDESEAACTKQVCPAEKISCGDLSNKCIPS 89
Query: 262 NWLCDEEMDCST---------------------------------DDIVDNTDEDWDKFH 288
+W CD + DC + ++ D +DE
Sbjct: 90 SWRCDGQKDCESGIDEAGCAPACSPDEFQCSNKTCISINFVCDGYNNCGDGSDERKCSPL 149
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELR 346
C + QC S CIP W+CD + DC D++DE ++ Y + C +E +
Sbjct: 150 TCSPNEFQCNNS-VCIPELWVCDNQADCE-----DHSDESVERCGYDAKAFNTCAAHEFQ 203
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNNKAD---CENLKC---------SHKCS 392
CG+ +C+ L+ CDG DC + DE P + D C + C H C
Sbjct: 204 CGNG-ECILLNWKCDGDEDCKDKSDEQDCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCP 262
Query: 393 PTPRGAMCFCPAG-QNPNKTQCVDAD-----------------------ECLI------D 422
A C + ++P+K QC + EC I +
Sbjct: 263 DNSDEAGCVQESACESPSKFQCKSGECIDGGKVCDSHRDCRDWSDEPLKECGINECSMNN 322
Query: 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
G C C + + Y C C GY L D K+C ++
Sbjct: 323 GGCSHICKDLKIGYECECPPGYKLL-DKKTCGDID 356
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L NS DL P +D
Sbjct: 473 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRKTLFNS-DLSEPRAIAVDPTRRFM 531
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV+ NI+WP+ + +D LYW DS L+++ + +
Sbjct: 532 YWSDWGDKAKIEKAGLNGVGRQMLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 591
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 592 GSNRKVL 598
>gi|444525491|gb|ELV14038.1| Low-density lipoprotein receptor [Tupaia chinensis]
Length = 920
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/332 (31%), Positives = 147/332 (44%), Gaps = 39/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC N C++ CD DC +G DE C P F C CIP W C
Sbjct: 148 CSQDEFRCHDGN-CISRQFVCDSDRDCLDGSDEAACQTPTCGPSDFRCNSSTCIPALWAC 206
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG +C EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 207 DGEPEC-EDGSDEWPQNCQGRNTSSPRADLSPCSALEFHCG-SGECIHSSWRCDNDPDCK 264
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED C + QC+ CI + CD E DC D +DE
Sbjct: 265 -----DKSDEDGCNTATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDE----L 309
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
N C PN+ +C S +C+ L K C+ DC + DE +C N CSH
Sbjct: 310 GCVNVTRCEGPNKFKC-HSGECITLDKVCNAVRDCRDWSDEPLKECGTNECLDNNGGCSH 368
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G + ++ +C D DEC +C Q C N S+ C C EG+ L
Sbjct: 369 VCNDLKIGHECLCPDGFRLVDQRKCEDIDECQEPDTCSQLCVNLEGSFKCECDEGFQLDL 428
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
K+C +V A ++F++ ++R++ L+
Sbjct: 429 LTKTCKSVG----PIAYLLFTNRHEVRKMTLD 456
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 92/204 (45%), Gaps = 31/204 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC C G C +CIP
Sbjct: 65 KCERNEFQCRDGKCISYKWVCDGLPEC-QDGSDESQETCRSVTCKAGDFSCGGRVNRCIP 123
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD ++DC + +DE C + +C CI ++CD + DC
Sbjct: 124 QSWRCDSQVDCE-----NGSDEQGCAPRTCSQDEFRCH-DGNCISRQFVCDSDRDC---- 173
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+D +DE + C P++ RC SS C+ CDG+P+C +G DE P
Sbjct: 174 -LDGSDE-----AACQTPTCGPSDFRCNSST-CIPALWACDGEPECEDGSDEWP------ 220
Query: 381 DCENLKCSHKCSPTPRGAMCFCPA 404
C + + +PR + C A
Sbjct: 221 ----QNCQGRNTSSPRADLSPCSA 240
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L + ++ + W
Sbjct: 557 DGLAVDWIHGNIYWTDSILGTVSVADTKGVKRKTLFKERGSKPRAIAVDPVHGFMYWTDW 616
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA ++EK G++G + LVT++IQWP+ + +D + LYW DS L+++ S+
Sbjct: 617 GTPA--------KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSNGRLYWVDSKLHSISSI 668
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G + L HP L
Sbjct: 669 DVNGGNRKTVLEDKKSLAHPFSL 691
>gi|395512552|ref|XP_003760500.1| PREDICTED: low-density lipoprotein receptor [Sarcophilus harrisii]
Length = 863
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 154/331 (46%), Gaps = 35/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CD DC +G DE + C P F C CIP+ W C
Sbjct: 113 CAHDQFRC-HDGKCISQEFVCDTDRDCEDGSDELNCPDPTCNPATFQCNNTVCIPKLWAC 171
Query: 225 DGFVDCLEDGSDE-PNTC--------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
DG DC EDGSDE P+ C C + + C S +CI +W CD DC
Sbjct: 172 DGDQDC-EDGSDEWPDNCGGHSLVKESKPCSSLEFHCG-SGECIHMSWKCDGGFDCK--- 226
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE+ C + QC +C+ + C++E DC D +DE
Sbjct: 227 --DKSDEEGCVKATCRPDEFQCN-DGECVHGSRQCNKEYDCK-----DMSDE----MGCV 274
Query: 336 NAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCS 392
N LC P++ +C S +C++ K C+G DC + DE +C + K CSH C+
Sbjct: 275 NVTLCEGPDKFKC-HSGECISFDKVCNGPRDCRDWSDEPIKECGTNECLDNKGGCSHICN 333
Query: 393 PTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C CP G + ++ +C D DEC C Q+C N SY C C EGY P K
Sbjct: 334 DLKIGYECLCPEGFRLVDQKRCEDIDECQNPDICSQSCVNLQGSYKCECNEGYQTDPITK 393
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C A+ A + F++ ++R++ L+ S
Sbjct: 394 TCKAI---AGTIAYLFFTNRHEVRKMTLDRS 421
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 106/357 (29%), Positives = 145/357 (40%), Gaps = 83/357 (23%)
Query: 161 NAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MG 215
NAV C NE +C +C++ CDG +C +G DE + C G+FSCG +
Sbjct: 26 NAVDKCGRNEFQC-LDGKCISYKWVCDGTAECKDGSDETLETCSSVTCKQGEFSCGGRIN 84
Query: 216 KCIPESWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CIP +WKCD DC E+GSDE P TC H Q +C KCI ++CD + DC
Sbjct: 85 RCIPSTWKCDSHNDC-ENGSDEQDCPPKTCAHD----QFRCH-DGKCISQEFVCDTDRDC 138
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE C QC + CIP W CD + DC D +DE D
Sbjct: 139 E-----DGSDELNCPDPTCNPATFQCN-NTVCIPKLWACDGDQDCE-----DGSDEWPDN 187
Query: 332 YFSHNAVL----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------- 372
H+ V C E CG S +C+ +S CDG DC + DE
Sbjct: 188 CGGHSLVKESKPCSSLEFHCG-SGECIHMSWKCDGGFDCKDKSDEEGCVKATCRPDEFQC 246
Query: 373 --------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD------- 417
CN + DC+++ C +C P + +C+ D
Sbjct: 247 NDGECVHGSRQCNKEYDCKDMSDEMGCVNV---TLCEGPDKFKCHSGECISFDKVCNGPR 303
Query: 418 ----------------ECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
ECL + G C C + + Y C C EG+ L D K C ++
Sbjct: 304 DCRDWSDEPIKECGTNECLDNKGGCSHICNDLKIGYECLCPEGFRLV-DQKRCEDID 359
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--N 92
D DW + Y+ + GT ++A + ++L +Q+ + ++ +
Sbjct: 481 DGIAVDWIHGNLYWTDSVLGTISVANTKGSKRKTL--FKQEGAKPRAIVVDPVHGFMYWT 538
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
W PA ++EK+G++G + PLVT+NIQWP+ + +D + + LYW DS L+++
Sbjct: 539 DWGTPA--------KIEKSGLNGVDSFPLVTENIQWPNGITLDLSSERLYWVDSKLHSIS 590
Query: 153 SVRVDGSHNAV-------LCHPNEL 170
SV V+G + + L HP L
Sbjct: 591 SVDVNGGNRRIVLEDKNKLAHPFSL 615
>gi|149567113|ref|XP_001519450.1| PREDICTED: low-density lipoprotein receptor-related protein 4,
partial [Ornithorhynchus anatinus]
Length = 1486
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P C+ E +F C G+
Sbjct: 151 CSEKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCSLE----EFQCAYGR 205
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 206 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 260
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DCS DN+DE+ +
Sbjct: 261 --DQSDERNCTTSMCTAEQFRCK-SGRCVHLSWRCDGEDDCS-----DNSDEE--NCENT 310
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
C ++ C + +C+ K C+G DC++ DE P N + + +N C+
Sbjct: 311 GVPQCASDQFLC-RNGRCIGQRKLCNGIDDCADNSDESPQQNCRPRTGEENCNVDNGGCA 369
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 370 QKCQMARGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSDGAFQCWCEAGYEL 429
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 430 RPDRRSCKALG---PEPV-LLFANRIDIRQV 456
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 47 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 105
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + +C
Sbjct: 106 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSEKEFRC 158
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 159 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 183
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 886 KIERAGMDASSRRVIISSNLTWPNGLAIDYASQRLYWADAGMKTIEFAGLDGSKRKVL 943
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+AGM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1194 KLERAGMDGSDRTVLISNNLGWPNGLTVDKAGSRLLWADAHTERIEAADLNGANRRTLVS 1253
Query: 167 P 167
P
Sbjct: 1254 P 1254
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 493 DRILRANLNGSNVEEVVSTGLESPGGLAVDWLHDKLYWTDSGTSRIEVANLDGAHRKVLL 552
Query: 166 HPN 168
N
Sbjct: 553 WQN 555
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGS+ +
Sbjct: 581 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGSNRKAV 638
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1412 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEAARLDGSCRKVL 1468
>gi|449682193|ref|XP_004210018.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Hydra magnipapillata]
Length = 1054
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 163/349 (46%), Gaps = 50/349 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C +E +C S+ +C+ + CD DCS+G DE N++ C QF C G CI +
Sbjct: 244 CANDEFKCLSNGKCIKKAYRCDTVDDCSDGSDEMDCLNSDHRCETDQFRCSTGHCIHKYL 303
Query: 223 KCDGFVDCLEDGSDEPNTCIHQC------------------FNGQ-----VQCALSKKCI 259
+CDG DC+ D SDE N + + N Q + C +K+C+
Sbjct: 304 QCDGESDCI-DSSDELNCHVEKSQPKVGSLVMSTGNLTTSETNMQNDSCVLFCPTNKECL 362
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
+LCD E DC D D + C + +CA + KC +CD D
Sbjct: 363 SRAFLCDNENDCP--DGYDELSSTCESI-SCNKDEFKCA-NGKCEKKKQVCD-----GID 413
Query: 320 DIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D DN+DE D+ S A V C+ + +C + ++C+ ++ C+ DC+NG+DE C+
Sbjct: 414 DCGDNSDE-ADELCSPTAAPVSCNNDSYQCKNESKCIPMTSVCNSINDCANGDDEDNLCD 472
Query: 378 NKA-DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLID---GSCDQTCTN 431
K D EN CS+KC G C CP G + +K C+D DEC C Q CTN
Sbjct: 473 VKECDNENGGCSYKCKELKLGYECLCPQGFQLDSDKKSCIDIDECKEGWNVSKCSQICTN 532
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ +Y CSC G+ L K C A D +IF++ +D+R + N
Sbjct: 533 LNGTYKCSCHNGFNLV--NKKCRANGSVVD----LIFANELDVRILQSN 575
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 151/366 (41%), Gaps = 77/366 (21%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSC-GMGKCI 218
+V C +E +C + +C++ S CD + DC + DE N C G FSC G C+
Sbjct: 157 SVKCSVDEFQCLNKMRCISNSLRCDFRYDCDDKSDEVKCNLHNTTCPNGSFSCKGSNHCL 216
Query: 219 PESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
S KC+G +C D SDE N +C N + +C + KCI + CD DCS
Sbjct: 217 DNSLKCNGVKNC-PDNSDELNCPKSTEKCANDEFKCLSNGKCIKKAYRCDTVDDCS---- 271
Query: 277 VDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKY 332
D +DE + H+C Q +C+ + CI CD E DC S+D++ + ++ K
Sbjct: 272 -DGSDEMDCLNSDHRCETDQFRCS-TGHCIHKYLQCDGESDCIDSSDELNCHVEKSQPKV 329
Query: 333 FS-----HNAVLCHPNE------LRCGSSNQCVALSKFCDGKPDCSNGED------EGPF 375
S N N L C ++ +C++ + CD + DC +G D E
Sbjct: 330 GSLVMSTGNLTTSETNMQNDSCVLFCPTNKECLSRAFLCDNENDCPDGYDELSSTCESIS 389
Query: 376 CN-NKADCENLKCSHK--------------------CSPTPRGAMCFCPAGQNPNKTQCV 414
CN ++ C N KC K CSPT C + Q N+++C+
Sbjct: 390 CNKDEFKCANGKCEKKKQVCDGIDDCGDNSDEADELCSPTAAPVSCNNDSYQCKNESKCI 449
Query: 415 ----------------------DADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
D EC +G C C L Y C C +G+ L D K
Sbjct: 450 PMTSVCNSINDCANGDDEDNLCDVKECDNENGGCSYKCKELKLGYECLCPQGFQLDSDKK 509
Query: 452 SCTAVN 457
SC ++
Sbjct: 510 SCIDID 515
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 106/231 (45%), Gaps = 26/231 (11%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ------FSCGMGK-CIPES 221
+ RC +N CV+++K CDG DC + DE P A+C + F C CI
Sbjct: 79 QFRC-KNNLCVSVAKMCDGYDDCGDSSDESPTGGAKCVSIKCRNSDDFRCETNPVCISRY 137
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
++CDG +C ED SDE N +C + QC +CI ++ CD DC D +D
Sbjct: 138 YRCDGTFEC-EDHSDEANCESVKCSVDEFQCLNKMRCISNSLRCDFRYDCD-----DKSD 191
Query: 282 EDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
E H C NG C S C+ ++ C+ +C DN+DE +
Sbjct: 192 EVKCNLHNTTCPNGSFSCKGSNHCLDNSLKCNGVKNCP-----DNSDE---LNCPKSTEK 243
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN--LKCS 388
C +E +C S+ +C+ + CD DCS+G DE N+ CE +CS
Sbjct: 244 CANDEFKCLSNGKCIKKAYRCDTVDDCSDGSDEMDCLNSDHRCETDQFRCS 294
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 98/212 (46%), Gaps = 20/212 (9%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKC 224
+ ++ RC ++ C++ CDG +C + DE + +C+ +F C +CI S +C
Sbjct: 121 NSDDFRCETNPVCISRYYRCDGTFECEDHSDEANCESVKCSVDEFQCLNKMRCISNSLRC 180
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DC +D SDE +H C NG C S C+ ++ C+ +C DN+DE
Sbjct: 181 DFRYDC-DDKSDEVKCNLHNTTCPNGSFSCKGSNHCLDNSLKCNGVKNCP-----DNSDE 234
Query: 283 DW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+C N + +C + KCI + CD DCS D +DE H C
Sbjct: 235 LNCPKSTEKCANDEFKCLSNGKCIKKAYRCDTVDDCS-----DGSDEMDCLNSDHR---C 286
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ C+ CDG+ DC + DE
Sbjct: 287 ETDQFRC-STGHCIHKYLQCDGESDCIDSSDE 317
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 94/222 (42%), Gaps = 29/222 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
CH +E +C + C++L+ CD DC + DE C E QF C
Sbjct: 28 CHDDEFKC-KNGTCLSLTSMCDNVDDCGDNSDEERCVAEKNNKVCPIENGSTQFRCKNNL 86
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLCDEEMD 270
C+ + CDG+ DC D SDE T +C + + +C + CI + CD +
Sbjct: 87 CVSVAKMCDGYDDC-GDSSDESPTGGAKCVSIKCRNSDDFRCETNPVCISRYYRCDGTFE 145
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D++DE + +C + QC +CI ++ CD DC D +DE
Sbjct: 146 CE-----DHSDEANCESVKCSVDEFQCLNKMRCISNSLRCDFRYDCD-----DKSDE--V 193
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
K HN C C SN C+ S C+G +C + DE
Sbjct: 194 KCNLHNTT-CPNGSFSCKGSNHCLDNSLKCNGVKNCPDNSDE 234
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 101/285 (35%), Gaps = 65/285 (22%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
+C N + +C + KCI + CD DCS D +DE LN H +
Sbjct: 242 EKCANDEFKCLSNGKCIKKAYRCDTVDDCS-----DGSDE------MDCLNSDHRCETDQ 290
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
+ C + L+C +D ++S D + H E P V
Sbjct: 291 FRCSTGHCIHKY-------LQCDGESDCIDSSD--------------ELNCHVEKSQPKV 329
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALS 182
+ +L T + + C N+ +C++ +
Sbjct: 330 GSLVMSTGNL-----------------TTSETNMQNDSCVLFCPTNK-------ECLSRA 365
Query: 183 KFCDGKPDCSNGEDE-GPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--- 237
CD + DC +G DE C + C +F C GKC + CDG DC D SDE
Sbjct: 366 FLCDNENDCPDGYDELSSTCESISCNKDEFKCANGKCEKKKQVCDGIDDC-GDNSDEADE 424
Query: 238 ---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
P C N QC KCIP +C+ DC+ D DN
Sbjct: 425 LCSPTAAPVSCNNDSYQCKNESKCIPMTSVCNSINDCANGDDEDN 469
>gi|331702865|emb|CBX54721.1| vitellogenin receptor [Dicentrarchus labrax]
Length = 844
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 118/376 (31%), Positives = 158/376 (42%), Gaps = 71/376 (18%)
Query: 157 DGSHNAV------LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +V C N+ CG SNQC+ CDG+ DC +GEDE N C P +
Sbjct: 96 DGSDESVEICHMRTCRVNQFSCGVGSNQCIPFFWKCDGEKDCDSGEDEVNCGNITCAPNE 155
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDE 267
F+C G+CI ++ C+G DC DGSDE C + QC S CIP +W D
Sbjct: 156 FTCASGRCISRNFVCNGEDDC-GDGSDEVECAPSSCGPSEFQCGNS-SCIPASWVCDDDV 213
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ +D+ +C + ++QC S +CI W CD + DC D++DE
Sbjct: 214 DCQDQSDESPSRCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDPDCK-----DSSDE 267
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ C P++ +C N C+ S+ C+ DC++G DE GP
Sbjct: 268 -----ANCPVRTCGPDQFKCDDGN-CILGSRQCNSFRDCTDGSDEVNCKNMTQCNGPEKF 321
Query: 375 ------------FCNNKADC------------------ENLKCSHKCSPTPRGAMCFC-P 403
CN DC N CSH C G C C P
Sbjct: 322 KCRSGECIEMSKVCNKVRDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTP 381
Query: 404 AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
Q + C D +ECL G C Q C N Y C C GY + P C AV EP
Sbjct: 382 GLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEP 438
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIRR+ L
Sbjct: 439 C-LIFTNRRDIRRLGL 453
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 91/190 (47%), Gaps = 21/190 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +CG+ +C+ CDG DC++G DE C F C G+C+P+ W C
Sbjct: 30 CEASQFQCGNG-RCIPSVWQCDGDEDCADGSDENSCVRKTCAEVDFVCRNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCAL-SKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE H C Q C + S +CIP W CD E DC + + D
Sbjct: 89 DGEPDC-EDGSDESVEICHMRTCRVNQFSCGVGSNQCIPFFWKCDGEKDCDSGE-----D 142
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E C + CA S +CI N++C+ E DC D +DE C
Sbjct: 143 EVNCGNITCAPNEFTCA-SGRCISRNFVCNGEDDCG-----DGSDE-----VECAPSSCG 191
Query: 342 PNELRCGSSN 351
P+E +CG+S+
Sbjct: 192 PSEFQCGNSS 201
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 11/120 (9%)
Query: 54 GTHTLALE-FNHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
GT +++ FN Q + F + + +S+ + + W PA ++EK+
Sbjct: 532 GTKIISVANFNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPA--------KIEKS 583
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVLCHPNEL 170
GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + VL P+ L
Sbjct: 584 GMNGVDRQVLVASDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSPDYL 643
>gi|390179023|ref|XP_001359537.3| GA16002, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859682|gb|EAL28683.3| GA16002, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 1039
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 153/373 (41%), Gaps = 77/373 (20%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + +C S C+ LS CD DC +G DE CNA C +F+C G CI WK
Sbjct: 286 CSPEQFQCKSGEGVCIPLSWMCDQNKDCDDGSDEAQ-CNATCRSDEFTCASGDCIQSRWK 344
Query: 224 CDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC+ DGSDE N +C C + CI W+CD + DC D++DE
Sbjct: 345 CDGDHDCV-DGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDE 397
Query: 283 DWD-------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ C + C C+ W+CD ++DC D D D
Sbjct: 398 KQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGD-------DEDPANCQ 450
Query: 336 NAVLCHPNELRCG-------------------------------------------SSNQ 352
N V C P++ +CG Q
Sbjct: 451 N-VTCRPDQFQCGDRSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQ 509
Query: 353 CVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NP 408
C+AL K C+ + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 510 CIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSG 569
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASII 467
+K CVD DEC G+C Q C N + C C GY P + C A + AS++
Sbjct: 570 DKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASLL 625
Query: 468 FSSTVDIRRIHLN 480
+ DIR+I L+
Sbjct: 626 LARRHDIRKIALD 638
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 141/349 (40%), Gaps = 70/349 (20%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPES 221
+C P E+ C + QC+ CDG DC + DE C+P QF C G G CIP S
Sbjct: 245 MCQPYEVMCKNMEQCIPRMWLCDGDFDCRDMSDEQDCTRKTCSPEQFQCKSGEGVCIPLS 304
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC +DGSDE C C + + CA S CI W CD + DC VD +D
Sbjct: 305 WMCDQNKDC-DDGSDEAQ-CNATCRSDEFTCA-SGDCIQSRWKCDGDHDC-----VDGSD 356
Query: 282 E-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
E + +C C + CI W+CD + DC D++DE + +
Sbjct: 357 ELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDEKQNCSIDPGLLRG 410
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----------------------- 375
C P+E C C+ + CDG DC G+DE P
Sbjct: 411 FCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPANCQNVTCRPDQFQCGDRSCIAGH 470
Query: 376 --CNNKADCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPN 409
CN + DC + C + PR G C CP G++
Sbjct: 471 LNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALDKVCNKRKDCPDGEDEP 530
Query: 410 KTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+C +EC +G C C + + Y C C +GY L D ++C ++
Sbjct: 531 AGKC-GVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTCVDID 578
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPH 261
+ C QF CG G CIP+ W CD DC DGSDE + CI C +V C ++CIP
Sbjct: 204 STCNADQFRCGNGNCIPQKWVCDHEADCT-DGSDELSLLCISMCQPYEVMCKNMEQCIPR 262
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDD 320
WLCD + DC D +DE C Q QC + CIP +W+CD+ DC
Sbjct: 263 MWLCDGDFDCR-----DMSDEQDCTRKTCSPEQFQCKSGEGVCIPLSWMCDQNKDCD--- 314
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + C +E C S + C+ CDG DC +G DE
Sbjct: 315 --DGSDE------AQCNATCRSDEFTCASGD-CIQSRWKCDGDHDCVDGSDE 357
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 761 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 820
Query: 167 PNEL 170
E
Sbjct: 821 STEY 824
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
Y C H + ++ +D C P+E C C+ + CDG DC G+DE P
Sbjct: 389 YDCKDHSDEKQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPAN 448
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
N C P QF CG CI C+G DC DGSDE
Sbjct: 449 CQNVTCRPDQFQCGDRSCIAGHLNCNGEKDC-ADGSDE 485
>gi|390179017|ref|XP_003736782.1| GA16002, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859679|gb|EIM52855.1| GA16002, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1073
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 113/373 (30%), Positives = 153/373 (41%), Gaps = 77/373 (20%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + +C S C+ LS CD DC +G DE CNA C +F+C G CI WK
Sbjct: 286 CSPEQFQCKSGEGVCIPLSWMCDQNKDCDDGSDEAQ-CNATCRSDEFTCASGDCIQSRWK 344
Query: 224 CDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC+ DGSDE N +C C + CI W+CD + DC D++DE
Sbjct: 345 CDGDHDCV-DGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDE 397
Query: 283 DWD-------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ C + C C+ W+CD ++DC D D D
Sbjct: 398 KQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGD-------DEDPANCQ 450
Query: 336 NAVLCHPNELRCG-------------------------------------------SSNQ 352
N V C P++ +CG Q
Sbjct: 451 N-VTCRPDQFQCGDRSCIAGHLNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQ 509
Query: 353 CVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NP 408
C+AL K C+ + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 510 CIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSG 569
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASII 467
+K CVD DEC G+C Q C N + C C GY P + C A + AS++
Sbjct: 570 DKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASLL 625
Query: 468 FSSTVDIRRIHLN 480
+ DIR+I L+
Sbjct: 626 LARRHDIRKIALD 638
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 141/349 (40%), Gaps = 70/349 (20%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPES 221
+C P E+ C + QC+ CDG DC + DE C+P QF C G G CIP S
Sbjct: 245 MCQPYEVMCKNMEQCIPRMWLCDGDFDCRDMSDEQDCTRKTCSPEQFQCKSGEGVCIPLS 304
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC +DGSDE C C + + CA S CI W CD + DC VD +D
Sbjct: 305 WMCDQNKDC-DDGSDEAQ-CNATCRSDEFTCA-SGDCIQSRWKCDGDHDC-----VDGSD 356
Query: 282 E-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
E + +C C + CI W+CD + DC D++DE + +
Sbjct: 357 ELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDEKQNCSIDPGLLRG 410
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----------------------- 375
C P+E C C+ + CDG DC G+DE P
Sbjct: 411 FCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPANCQNVTCRPDQFQCGDRSCIAGH 470
Query: 376 --CNNKADCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPN 409
CN + DC + C + PR G C CP G++
Sbjct: 471 LNCNGEKDCADGSDERDCGLATPPRECNATTEFNCGGGQCIALDKVCNKRKDCPDGEDEP 530
Query: 410 KTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+C +EC +G C C + + Y C C +GY L D ++C ++
Sbjct: 531 AGKC-GVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTCVDID 578
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 82/172 (47%), Gaps = 20/172 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPH 261
+ C QF CG G CIP+ W CD DC DGSDE + CI C +V C ++CIP
Sbjct: 204 STCNADQFRCGNGNCIPQKWVCDHEADCT-DGSDELSLLCISMCQPYEVMCKNMEQCIPR 262
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDD 320
WLCD + DC D +DE C Q QC + CIP +W+CD+ DC
Sbjct: 263 MWLCDGDFDCR-----DMSDEQDCTRKTCSPEQFQCKSGEGVCIPLSWMCDQNKDCD--- 314
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + C +E C S + C+ CDG DC +G DE
Sbjct: 315 --DGSDE------AQCNATCRSDEFTCASGD-CIQSRWKCDGDHDCVDGSDE 357
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 761 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 820
Query: 167 PNEL 170
E
Sbjct: 821 STEY 824
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
Y C H + ++ +D C P+E C C+ + CDG DC G+DE P
Sbjct: 389 YDCKDHSDEKQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPAN 448
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
N C P QF CG CI C+G DC DGSDE
Sbjct: 449 CQNVTCRPDQFQCGDRSCIAGHLNCNGEKDC-ADGSDE 485
>gi|431915751|gb|ELK16084.1| Low-density lipoprotein receptor-related protein 4 [Pteropus
alecto]
Length = 1929
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 171 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 225
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 226 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 280
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 281 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 330
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 331 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNANNGGCA 389
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 390 QKCQMVRGAVQCTCHTGYRLTEDGRMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 449
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 450 RPDRRSCKALG---PEPV-LLFANRIDIRQV 476
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 906 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 963
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R +N NS D P A +FP
Sbjct: 1450 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVN---NSLDEPRAIAVFPRKG 1506
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1507 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1566
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1567 LNGKLRQVLVSHVSHPFAL 1585
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 72/170 (42%), Gaps = 33/170 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 48 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 106
Query: 238 PN-------------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ +C + C + CI W CD + DC D
Sbjct: 107 QDCHKPPPRDSHLLRIRWGGLGAPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----D 160
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
N+DE D +C + + +C+ CI +W CD + DC D +DE+
Sbjct: 161 NSDEQCD-MRKCSDKEFRCS-DGSCIAEHWYCDGDTDCK-----DGSDEE 203
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1214 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLVS 1273
Query: 167 P 167
P
Sbjct: 1274 P 1274
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 513 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 572
Query: 166 HPN 168
N
Sbjct: 573 WQN 575
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 601 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 658
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL +
Sbjct: 1432 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLVN 1490
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 820 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 879
Query: 168 N 168
N
Sbjct: 880 N 880
>gi|390470505|ref|XP_002807383.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Callithrix jacchus]
Length = 1193
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 156/331 (47%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 225 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPVPPCNLE----EFQCAYGR 279
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CDG D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 280 CILDIYHCDGDDD-CGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDTDCD--- 334
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 335 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 384
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DEGP N + + N C+
Sbjct: 385 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDEGPQQNCRPRTGEENCNVNNGGCA 443
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 444 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 503
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 504 RPDRRSCKALG---PEPV-LLFANRIDIRQV 530
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 567 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 626
Query: 166 HPN 168
N
Sbjct: 627 WQN 629
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 655 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 712
>gi|380012876|ref|XP_003690500.1| PREDICTED: vitellogenin receptor-like [Apis florea]
Length = 1750
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 156/357 (43%), Gaps = 77/357 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C++ C+G DC++ DE +C F+C +G CIP++WKCDG VDC DGSDE
Sbjct: 989 CISKYLVCNGYNDCTDLSDELNCNKHKCDNDSFACEIGTCIPKTWKCDGEVDC-PDGSDE 1047
Query: 238 PNTC--------IHQCFNG--------------------------------------QVQ 251
TC + CFNG + +
Sbjct: 1048 SETCQRKKCPSEMFTCFNGRCIDLILKCNGISECEDDSDEKYCNDKSTNNYVNCTADEYK 1107
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C S C+P + CD +C +D D +C + C +KKCI +W+CD
Sbjct: 1108 CFDSDLCLPKQFRCDGIKNCPKND-------DERDCARCNEAEYVCE-NKKCIEKSWVCD 1159
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
DC D D + D + +++ +++ + E +C S+ C+ +K CDGK DC +
Sbjct: 1160 RVDDCG--DGSDERNCDGSNWRTNSVSMISNCKEFKC-SNGICLPFNKVCDGKIDCLDQS 1216
Query: 371 DEGPFCNNKADCE-----NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDG 423
DE DCE N C++ C TP G +C C G + + C D DEC
Sbjct: 1217 DEF------GDCEISCTKNNPCTNMCHKTPTGPVCTCRNGYHLSSDLKTCEDIDECK-KN 1269
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C Q C NT+ S+ CSC EGY +R D SC + II S DIR++ N
Sbjct: 1270 VCSQICHNTNGSFTCSCYEGYVIRSDKTSCKVAGSQME----IITVSGTDIRKLSPN 1322
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 132/295 (44%), Gaps = 47/295 (15%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSD-----EPNTCIHQCFNGQVQCALSKKCIPH 261
P F C GKCI ++CDG +C ++ + E N + +C + QCA CIP
Sbjct: 29 PDFFHCKNGKCISSLFRCDGENECGDNSDEMDCNGETNLHMIRCTTDEFQCA-DHSCIPE 87
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCD-------- 311
CD + DC D +DE K +C N +C S CI W+CD
Sbjct: 88 EKFCDAKSDC-----YDGSDEYIGCVKELKC-NNSFRCKDSH-CIRKEWVCDGVPDCPDK 140
Query: 312 -EEMDCSTDDI-VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
+E C ++ I ++ + ++D+Y N +C+ L+ CD K DC +
Sbjct: 141 SDEEKCESNIISIEECNNEYDRYLCKNQ--------------RCIFLNATCDEKNDCGDN 186
Query: 370 EDEGPFCNNKADCE---NLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSC 425
DE KAD KC H C TP+G C C +G N C D +EC G C
Sbjct: 187 SDEDLDACKKADASCKLTAKCQHNCRKTPKGGQCSCRSGYKLINNQTCTDINECDNYGIC 246
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
DQ C N+ SY C C GY ++ D K+C A + A+++FS +I +L+
Sbjct: 247 DQQCINSAGSYTCFCQPGYVMQDDKKTCKA----EGGEATMVFSIKSEIHGYYLD 297
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 114/280 (40%), Gaps = 74/280 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC-----------------NAECT 206
C+ E++CG ++C+ + CDG DC +GEDE FC N EC
Sbjct: 895 CNTGEIKCGEHDKCIKSYQRCDGIIDCPSGEDESSSFCEDFHWSICKHQDQFRCKNGECI 954
Query: 207 PG------------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
+F C G CI + C+G+ DC D SDE N
Sbjct: 955 SKSKYCNSHYDCSDRSDEEGCVKKEYEFQCHEGACISKYLVCNGYNDC-TDLSDELNCNK 1013
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--------DKFHQCFNGQ 294
H+C N C + CIP W CD E+DC D +DE + CFNG
Sbjct: 1014 HKCDNDSFACEIG-TCIPKTWKCDGEVDCP-----DGSDESETCQRKKCPSEMFTCFNG- 1066
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQC 353
+CI C+ +C D++DE + + ++N V C +E +C S+ C
Sbjct: 1067 -------RCIDLILKCNGISECE-----DDSDEKYCNDKSTNNYVNCTADEYKCFDSDLC 1114
Query: 354 VALSKFCDGKPDCSNGEDEG--PFCNN-KADCENLKCSHK 390
+ CDG +C +DE CN + CEN KC K
Sbjct: 1115 LPKQFRCDGIKNCPKNDDERDCARCNEAEYVCENKKCIEK 1154
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPES 221
+ C +E +C + + C+ KFCD K DC +G DE C E F C CI +
Sbjct: 70 IRCTTDEFQC-ADHSCIPEEKFCDAKSDCYDGSDEYIGCVKELKCNNSFRCKDSHCIRKE 128
Query: 222 WKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSK--KCIPHNWLCDEEMDCSTD 274
W CDG DC D SDE I +C N + L K +CI N CDE+ DC
Sbjct: 129 WVCDGVPDC-PDKSDEEKCESNIISIEEC-NNEYDRYLCKNQRCIFLNATCDEKNDCG-- 184
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
DN+DED D C C L+ KC
Sbjct: 185 ---DNSDEDLD---ACKKADASCKLTAKC 207
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 11/94 (11%)
Query: 96 LPAPEIF-----PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
LP+ IF ++ + AGM G+N + LV ++++WP+SL IDY + LYW D+
Sbjct: 403 LPSSGIFYWTEWGMNSSILMAGMDGKNITVLVNQDLEWPNSLSIDYPNNRLYWIDTKQKM 462
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
+ES+R+DG+ ++ G++ + +L+ F
Sbjct: 463 IESIRLDGTDRRIVLK------GTAKKPFSLAVF 490
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
+D P +I+ ++ G N + +V ++ +L IDY + LYW D+H +ES
Sbjct: 1445 YDRPMSKIY-------RSNTMGNNATAIVHLDLGLVLALTIDYARSKLYWSDTHFKNIES 1497
Query: 154 VRVDGSHNAVL 164
+DGS+ AV+
Sbjct: 1498 SNLDGSNRAVV 1508
>gi|383849495|ref|XP_003700380.1| PREDICTED: very low-density lipoprotein receptor-like [Megachile
rotundata]
Length = 935
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 115/366 (31%), Positives = 154/366 (42%), Gaps = 65/366 (17%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C + C S N +CVAL+ CD DCS+G DE CN C +F+C CI +SW
Sbjct: 157 CTAEQFTCHSGNGECVALTWMCDDNTDCSDGSDEAE-CNDTCRSDEFTCANKHCIQQSW- 214
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTD 281
D DGSDE + C G L CI + W CD + DC +D+I
Sbjct: 215 VCDNDDDCGDGSDEKDCKPVTCRPGTEFACLQNYCITYRWRCDGDFDCPDHSDEIGCKEY 274
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ D+ C + C CI NW+CD + DC + DE + HN V C
Sbjct: 275 VNGDRVSHCHKKEFDCDDDVTCIHQNWVCDGDKDCP-----NGADESPQR--CHN-VTCR 326
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------------F 375
P++ +C + C++ +C+GK +C++G DE
Sbjct: 327 PDQFQCEDHHNCISGHLYCNGKAECADGSDEKNCTSKAVTCDPLTQFECSEGSCIPIYNV 386
Query: 376 CNNKADC------------------ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVD 415
CN DC N CS C P G C C AG N+T C D
Sbjct: 387 CNKNRDCIGWEDESTELCGVNECLKNNGGCSQICVDLPIGFRCNCSAGYRLIDNRT-CDD 445
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDI 474
DECLI GSC Q C N + CSC GY P D C A + AS++F+ DI
Sbjct: 446 IDECLIPGSCSQFCLNEKGGFKCSCATGYLKDPRDHTRCKAA----EGHASLLFTRRHDI 501
Query: 475 RRIHLN 480
R++ L+
Sbjct: 502 RKVALD 507
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 85/165 (51%), Gaps = 13/165 (7%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNAECTPGQFSCGMG 215
S +++ C + RC ++ C+ S CD DC + DE + +CT +F C G
Sbjct: 28 SIDSMPCSLRQFRC-ANGVCIPYSWVCDLTDDCRDNSDETTKECKGSQKCTDSEFKCSNG 86
Query: 216 KCIPESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+CIP +W CDG DC DGSDE P C + C + +C+ +CIP WLCD + DC
Sbjct: 87 RCIPGTWHCDGDKDC-HDGSDEDPALCRSKPCSETEFECS-PGECIPKTWLCDHQPDC-- 142
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS 317
+ D +++ + C Q C + + +C+ W+CD+ DCS
Sbjct: 143 --MNDLDEKNCQRTKNCTAEQFTCHSGNGECVALTWMCDDNTDCS 185
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHN 262
C+ QF C G CIP SW CD DC ++ + C +C + + +C+ + +CIP
Sbjct: 34 CSLRQFRCANGVCIPYSWVCDLTDDCRDNSDETTKECKGSQKCTDSEFKCS-NGRCIPGT 92
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD + DC D +DED + C + +C+ +CIP WLCD + DC D
Sbjct: 93 WHCDGDKDCH-----DGSDEDPALCRSKPCSETEFECS-PGECIPKTWLCDHQPDCMND- 145
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNNK 379
D+ C + C S N +CVAL+ CD +
Sbjct: 146 --------LDEKNCQRTKNCTAEQFTCHSGNGECVALTWMCD----------------DN 181
Query: 380 ADCENLKCSHKCSPTPR 396
DC + +C+ T R
Sbjct: 182 TDCSDGSDEAECNDTCR 198
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAV 163
+ R+EKAGM G +R +V +++WP+ L +D +YW D+ LN + S DGS V
Sbjct: 628 EARIEKAGMDGSHRMVIVDNDVKWPNGLTLDLIGRKVYWVDAKLNIIGSCNYDGSGRRTV 687
Query: 164 LCHPNELR 171
L P LR
Sbjct: 688 LYSPVVLR 695
>gi|358410948|ref|XP_003581884.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Bos taurus]
Length = 1655
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/146 (41%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGA 398
C N + C +N+C+ LS+ C+G DC +G DEG C +C+ L C HKC+
Sbjct: 111 CPWNHIACLGANKCIHLSQLCNGVLDCLDGYDEGVHCRELLPNCQQLNCQHKCAMVRNST 170
Query: 399 MCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
MC+C G + C D DEC I G+C Q+C NT+ SY CSC EGY ++PD +SC A
Sbjct: 171 MCYCEDGFEIKEDGRSCKDQDECAIYGTCSQSCVNTYGSYACSCVEGYIMQPDNRSCKAK 230
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
N P D+P ++ +++ I +LNGS
Sbjct: 231 NEPTDKPPLLLIANSETIEIFYLNGS 256
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 116/244 (47%), Gaps = 28/244 (11%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSK 301
C + QC CIP W CD E DC D +DE C + C +
Sbjct: 1161 CNANEFQCHPDGNCIPDVWHCDGEKDCE-----DGSDEKGCNGTLRLCDHKTKFSCRSTG 1215
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFC 360
+CI W+CD ++DC D +DED + LC P + C + ++ C+ K C
Sbjct: 1216 RCISKAWVCDGDIDCE-----DQSDED-----DCDNFLCGPPKYPCANDTSVCLQPEKLC 1265
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAG---QNPNKTQCVDA 416
+G+ DC +G DEG C+ + N CS+ CS P RG +C CP G NKT C
Sbjct: 1266 NGRWDCPDGSDEGDLCD-ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLGRDNKT-CEIV 1323
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
D C C Q C + CSC EG+ L DG+SC++V+ + A IIFS +IR+
Sbjct: 1324 DYCSNHLKCSQVCEQHKQTVKCSCYEGWKLDVDGQSCSSVDPFE---AFIIFSIRHEIRK 1380
Query: 477 IHLN 480
I L+
Sbjct: 1381 IDLH 1384
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+EKA M G NR VT + WP+ L +D++ LYWCD++ + +E V ++G+H ++
Sbjct: 709 RIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTHTLYWCDAYYDHIEKVFLNGTHRKIVYS 768
Query: 167 PNEL 170
EL
Sbjct: 769 GKEL 772
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC C Q C + +CIP
Sbjct: 917 NHSCPDDQFKCKNNRCIPKRWLCDGANDCGSNEDESNQTCSARTCEVDQFSCG-NGRCIP 975
Query: 261 HNWLCDEEMDCSTDDIVDNTDE 282
WLCD E DC D+TDE
Sbjct: 976 RAWLCDREDDCG-----DHTDE 992
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C C+ CDG+ DC +G DE CN +FSC
Sbjct: 1156 HSPAGCNANEFQCHPDGNCIPDVWHCDGEKDCEDGSDEKG-CNGTLRLCDHKTKFSCRST 1214
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDC 271
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ DC
Sbjct: 1215 GRCISKAWVCDGDIDC-EDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKLCNGRWDC 1271
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG--MGKCIPESWK 223
H + C S+ +C++ + CDG DC + DE N C P ++ C C+
Sbjct: 1205 HKTKFSCRSTGRCISKAWVCDGDIDCEDQSDEDDCDNFLCGPPKYPCANDTSVCLQPEKL 1264
Query: 224 CDGFVDCLEDGSDEPNTC 241
C+G DC DGSDE + C
Sbjct: 1265 CNGRWDC-PDGSDEGDLC 1281
>gi|148694899|gb|EDL26846.1| low density lipoprotein-related protein 1B (deleted in tumors) [Mus
musculus]
Length = 2538
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 122/400 (30%), Positives = 158/400 (39%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 583 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 642
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ KKCI +W+CD E DC D +D +D
Sbjct: 643 QKDC-EDGLDELH-CDSSCSWNQFACSV-KKCISKHWICDGEDDCG--DSLDESDSICGA 697
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC S+ N D + + HN V
Sbjct: 698 V-TCAADMFSCQGSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKVC 756
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E RC V CDG DC + DE
Sbjct: 757 IPKQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDE 816
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C+ + DC +
Sbjct: 817 APINPRCRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINECLSKKISG 876
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CTEG
Sbjct: 877 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCRCTEG 935
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y +PD C +++ DE +I + +IR+I +GS
Sbjct: 936 YETQPDNPNGCRSLS---DEEPFLILADQHEIRKISTDGS 972
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 148/366 (40%), Gaps = 87/366 (23%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 1471 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEK--- 1524
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q QC
Sbjct: 1525 NCEPAFPVCSSSEYMCASGGCLSASLKCNGEPDCV-DGSDEMD-CVIECKEDQFQCKNKA 1582
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
CIP WLCD DC VD +DE+ C + + C S C H W+CD E
Sbjct: 1583 YCIPIRWLCDGIYDC-----VDGSDEETCGRGGSICRDDEFLCNNSL-CKLHFWVCDGED 1636
Query: 315 DCS--------------------------------------TDDIVDNTDEDW-DKYFSH 335
DC +D DN+DE+ S
Sbjct: 1637 DCGDNSDEAPDMCVKFLCPPTRPYRCRNDRICLQLEKICNGINDCGDNSDEEHCSGKLSL 1696
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------------GPFCNNKA 380
+ C +E C + N C+ + CDG DC +G DE G C + A
Sbjct: 1697 KSKPCKKDEFTCSNRN-CIPMELQCDGLDDCGDGSDEQGCLKTPIEHTCENNGNPCGDDA 1755
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C +K S C C G +N +C D +ECL+ G C C NT SY C
Sbjct: 1756 YCNQIKTS---------VFCRCKPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSYKC 1806
Query: 439 SCTEGY 444
C + +
Sbjct: 1807 VCDQNF 1812
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 1256 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 1314
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C +KKCIP N C+ + DC D DE
Sbjct: 1315 CDGENDC-GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCG-----DEEDEK 1368
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 1369 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 1418
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 1419 EFQC-KNNNCIPDHWRCDNQNDCSDNSDE 1446
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 1296 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLR 1354
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 1355 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 1408
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DED K C
Sbjct: 1409 NCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDEDNCK-----PQTCTLK 1457
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV+ +CDG+ DC++G DE
Sbjct: 1458 DFLC-SNGDCVSSRFWCDGEFDCADGSDE 1485
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 1334 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 1393
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 1394 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDE 1446
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 1447 DNCKPQTCTLKDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 1494
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 1495 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 1523
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV K CDG DC + DE + C+ +F C G CIP S +C+ +DC D SD
Sbjct: 502 RCVPHGKLCDGTNDCGDSSDELDCKVSTCSTVEFRCADGTCIPRSARCNQNMDC-SDASD 560
Query: 237 EP---NT-CIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E NT C H G ++C + C+ +W+CD DC D D
Sbjct: 561 EKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 618
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 619 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------LHCDSSCSWNQFAC 666
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S +C++ CDG+ DC + DE C AD + + SH C P
Sbjct: 667 -SVKKCISKHWICDGEDDCGDSLDESDSICGAVTCAADMFSCQGSHACVPQHWLCDGERD 725
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 726 CPDGSDELSSAGCAPNNT 743
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ + CV CDG P C + DE +C N C G C +C+P CD
Sbjct: 453 SEFECGNGD-CVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCD 511
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ MDC S + +NTD
Sbjct: 512 GTNDC-GDSSDELDCKVSTCSTVEFRCA-DGTCIPRSARCNQNMDCSDASDEKGCNNTDC 569
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ +W+CD DC D +DE K N C
Sbjct: 570 THFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 622
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 623 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE 652
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 162/433 (37%), Gaps = 90/433 (20%)
Query: 56 HTLALEFNHRNQSLCFI---QQQNVSSVRLRCAQIN-DLLNSWDLPAPEIFPLDERLEKA 111
H LAL+ Q+L F +Q+ S +R N ++ S D+ P +D R EK
Sbjct: 260 HVLALD---ECQNLMFWTNWNEQHPSIMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKL 316
Query: 112 GMH-------------GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV------- 151
G R +V SL + N ++W D +
Sbjct: 317 YFSDGSLGKIERCEYDGSQRHVIVKSGPGTFLSLAVYDN--YIFWSDWGRRAILRSNKYT 374
Query: 152 ----ESVRVDGSHN--AVLCHPNELRCGSSNQCVALSKFC--------DGKPDCSNGEDE 197
+ +R D H ++ N+ + C L+ C DG+ +CS D
Sbjct: 375 GGETKILRSDIPHQPMGIIAVANDTNSCELSPCALLNGGCHDLCLLTPDGRVNCSCRGDR 434
Query: 198 GPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
N C +F CG G C+ CDG C + ++ C ++
Sbjct: 435 ILLANNRCVTKNSSCNIYSEFECGNGDCVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSG 494
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
+ +++C+PH LCD DC D++DE K C + +CA CIP +
Sbjct: 495 FKPCYNRRCVPHGKLCDGTNDCG-----DSSDELDCKVSTCSTVEFRCA-DGTCIPRSAR 548
Query: 310 CDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
C++ MDCS D +DE + D + + +RC S++ CV S CDG D
Sbjct: 549 CNQNMDCS-----DASDEKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSND 603
Query: 366 CSNGEDEGPFCNNKADCENLKC----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI 421
C + DE LKC HKC G CP+G+ T D +
Sbjct: 604 CGDYSDE------------LKCPVQNKHKCEENYFG----CPSGRCILNTWVCDGQKDCE 647
Query: 422 DG----SCDQTCT 430
DG CD +C+
Sbjct: 648 DGLDELHCDSSCS 660
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 1991 IEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDG 2041
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 1062 VLVSKRLKFPRDLSLDPRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 1121
Query: 136 YNQDILYWCDSHLNTVESVRVDGSH 160
Y LYW D N +E +DGSH
Sbjct: 1122 YVNHRLYWADE--NHIEFSNMDGSH 1144
>gi|390351903|ref|XP_794505.3| PREDICTED: low-density lipoprotein receptor-related protein 2
[Strongylocentrotus purpuratus]
Length = 1230
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 121/372 (32%), Positives = 160/372 (43%), Gaps = 71/372 (19%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC---NAECTPGQFSCGMGKC 217
A C P+ C S +C+ + FCDG+ DC + +DE C N C G F+C G C
Sbjct: 234 ARTCAPDNFLC-QSGKCIPGAWFCDGEADCPDRDDEVQDICTSPNFTCHSGLFTCDDGTC 292
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQC----ALSKKCIPHNWLCDEEMDCS 272
I E W+CDG +C D SDE C + C +C L +CIP + +CD E+DC+
Sbjct: 293 ITEQWECDGIPEC-PDKSDEYRACPEYVCPENFYKCDQKKHLKNRCIPVSAVCDGEIDCA 351
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQ----CALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
D D+F C + + CI +LCD E DC D +DE
Sbjct: 352 MGD---------DEFQNCTMRTCEPEEFACRNGLCIRDVFLCDHENDCG-----DQSDEG 397
Query: 328 --------DWDKYFSHNAVLCHPNELRCGSSNQCVALS--KFCDGKPDCSNGED------ 371
D D F+ N C RC N C S CDG+ C+ GE
Sbjct: 398 SACNYTRCDPDDEFTCNNGRCVMASWRCDGQNDCRDNSDETGCDGQSTCAAGEYMCGDGE 457
Query: 372 ---EGPFCNNKADCEN----------------LKCSHKCSPTPRGAMCFCPAG--QNPNK 410
+ CNN+ DC + C H C T C C G NP++
Sbjct: 458 CILQELVCNNEVDCSDGLDEYRCGVNECENNATGCQHDCVNTANSYYCTCDTGFRLNPDR 517
Query: 411 TQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C + DEC + C Q C NT SY+C C +GYTL DGKSC N D IIFS
Sbjct: 518 RTCAEIDECSDMPELCSQVCENTIGSYLCKCVDGYTLETDGKSCKH-NSGID--PLIIFS 574
Query: 470 STVDIRRIHLNG 481
++ +R + L+G
Sbjct: 575 NSYYVRSLSLDG 586
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 143/355 (40%), Gaps = 75/355 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C P ++C +SN C++ CDG DC + DE C A C P F C GKCIP +W
Sbjct: 195 CPPGTVQCETSNICISPQWVCDGSNDCGDNSDEANILCEARTCAPDNFLCQSGKCIPGAW 254
Query: 223 KCDGFVDCLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + + C C +G C CI W CD +C D
Sbjct: 255 FCDGEADCPDRDDEVQDICTSPNFTCHSGLFTCD-DGTCITEQWECDGIPECP-----DK 308
Query: 280 TDEDW--------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
+DE + F++C + L +CIP + +CD E+DC+ D D+
Sbjct: 309 SDEYRACPEYVCPENFYKCDQKK---HLKNRCIPVSAVCDGEIDCAMGD---------DE 356
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-------NKADCEN 384
+ + C P E C + C+ CD + DC + DEG CN ++ C N
Sbjct: 357 FQNCTMRTCEPEEFAC-RNGLCIRDVFLCDHENDCGDQSDEGSACNYTRCDPDDEFTCNN 415
Query: 385 LKC---SHKC----------SPTPRGAMCFCPAGQNP--------------NKTQCVDA- 416
+C S +C T C AG+ N+ C D
Sbjct: 416 GRCVMASWRCDGQNDCRDNSDETGCDGQSTCAAGEYMCGDGECILQELVCNNEVDCSDGL 475
Query: 417 -------DECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
+EC + + C C NT SY C+C G+ L PD ++C ++ D P
Sbjct: 476 DEYRCGVNECENNATGCQHDCVNTANSYYCTCDTGFRLNPDRRTCAEIDECSDMP 530
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 114/239 (47%), Gaps = 21/239 (8%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
++ C + + RV +A +C+ + C + +C++L + CD DC + DEG
Sbjct: 45 VICSCTDNRTIANNDRVCVPPDATVCNGETQFTCANGEKCISLLQACDISADCPDASDEG 104
Query: 199 P-FC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALS 255
+C + +C QF+C G+CI +KCD + DCL++ ++ C C G +CA +
Sbjct: 105 TNYCYDHKCGVDQFTCANGRCIFSQFKCDFYDDCLDNSDEDQAICAFVTCAPGDFECA-N 163
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDN--TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
CI + +C+ D+ +D +DE C G VQC S CI W+CD
Sbjct: 164 GFCISNTTVCN-----GFDECLDGQASDELGCPERSCPPGTVQCETSNICISPQWVCDGS 218
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC DN+DE A C P+ C S +C+ + FCDG+ DC + +DE
Sbjct: 219 NDCG-----DNSDE---ANILCEARTCAPDNFLC-QSGKCIPGAWFCDGEADCPDRDDE 268
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 97/234 (41%), Gaps = 52/234 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
CV+ ++ C+G+ +C +G DE N C P +F C G CI C+G DC + +
Sbjct: 928 CVSSTELCNGEANCLDGSDEVHCNNTVCQPWEFRCRTGSCINHVLACNGEDDCPDSSDEV 987
Query: 238 PNTCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------- 271
+ C +C G QC + CIP W+CD + DC
Sbjct: 988 QDVCAERECSEGYFQCG-TGYCIPQTWVCDLDNDCGDASDEPLRECQSQTTCPTGWFSCV 1046
Query: 272 -------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
DD DN+DE+ C G+ QC C+P W+CD + DC
Sbjct: 1047 SNYRCVPSWSLCNGYDDCRDNSDEEQCDTATCEVGEFQCT-DGGCVPQRWVCDFDNDCG- 1104
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE + C +E RC SN+C+ CD + DC GEDE
Sbjct: 1105 ----DNSDEQACTFRQ-----CSESEFRC-LSNKCIPSRFVCDFEEDCPGGEDE 1148
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 97/232 (41%), Gaps = 20/232 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDC--SNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C ++ C ++ +C+ CD DC ++ ED+ C PG F C G CI +
Sbjct: 113 CGVDQFTC-ANGRCIFSQFKCDFYDDCLDNSDEDQAICAFVTCAPGDFECANGFCISNTT 171
Query: 223 KCDGFVDCLE-DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+GF +CL+ SDE C G VQC S CI W+CD DC DN+D
Sbjct: 172 VCNGFDECLDGQASDELGCPERSCPPGTVQCETSNICISPQWVCDGSNDCG-----DNSD 226
Query: 282 ED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
E + C C S KCIP W CD E DC D DE D S N
Sbjct: 227 EANILCEARTCAPDNFLCQ-SGKCIPGAWFCDGEADCP-----DRDDEVQDICTSPN-FT 279
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL-KCSHK 390
CH C C+ CDG P+C + DE C EN KC K
Sbjct: 280 CHSGLFTC-DDGTCITEQWECDGIPECPDKSDEYRACPEYVCPENFYKCDQK 330
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 140/365 (38%), Gaps = 53/365 (14%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C + Q CA +KCIP +W CD E DC+ D +DE D + + T
Sbjct: 875 CSSNQFACANQEKCIPLSWRCDTEADCT-----DGSDEPTDCPTRYCPDRTFQCDDTACV 929
Query: 65 RNQSLCFIQQQNV-SSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
+ LC + + S + C N + W+ ++ L +GE+ P +
Sbjct: 930 SSTELCNGEANCLDGSDEVHCN--NTVCQPWEFRCRTGSCINHVL---ACNGEDDCPDSS 984
Query: 124 KNIQ--------------------WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+Q P + V D + D D L +S
Sbjct: 985 DEVQDVCAERECSEGYFQCGTGYCIPQTWVCDLDNDCGDASDEPLRECQS--------QT 1036
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C C S+ +CV C+G DC + DE A C G+F C G C+P+ W
Sbjct: 1037 TCPTGWFSCVSNYRCVPSWSLCNGYDDCRDNSDEEQCDTATCEVGEFQCTDGGCVPQRWV 1096
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD DC D SDE QC + +C LS KCIP ++CD E DC + DE
Sbjct: 1097 CDFDNDC-GDNSDEQACTFRQCSESEFRC-LSNKCIPSRFVCDFEEDCPGGE-----DEV 1149
Query: 284 WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C F Q QC S CI ++CD C D++DE + C+P
Sbjct: 1150 ACPERMCYFPTQFQCD-SGHCIDEQFVCDGTSQCQ-----DSSDEVNCPTRLPQGLYCYP 1203
Query: 343 NELRC 347
N+ C
Sbjct: 1204 NQFTC 1208
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCA 298
TC+ C + Q CA +KCIP +W CD E DC+ D +DE D C + QC
Sbjct: 870 TCLVDCSSNQFACANQEKCIPLSWRCDTEADCT-----DGSDEPTDCPTRYCPDRTFQCD 924
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
C+ LC+ E +C +D +DE N +C P E RC + C+
Sbjct: 925 -DTACVSSTELCNGEANC-----LDGSDE-----VHCNNTVCQPWEFRC-RTGSCINHVL 972
Query: 359 FCDGKPDCSNGEDE 372
C+G+ DC + DE
Sbjct: 973 ACNGEDDCPDSSDE 986
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 141 LYWCDSHLNTVESVRVDGSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-G 198
++ CD H N +GS N C P++ ++ +CV S CDG+ DC + DE G
Sbjct: 381 VFLCD-HENDCGDQSDEGSACNYTRCDPDDEFTCNNGRCVMASWRCDGQNDCRDNSDETG 439
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC 252
+ C G++ CG G+CI + C+ VDC DG DE +++C N C
Sbjct: 440 CDGQSTCAAGEYMCGDGECILQELVCNNEVDC-SDGLDEYRCGVNECENNATGC 492
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
LD + + GM G +++ + + +P+ L IDY + WCD+HLN + +DG++
Sbjct: 704 LDAHIGRVGMDGTDKTRIHDNKMVFPNGLTIDYAAERRDWCDAHLNHIGFSNLDGTN 760
>gi|84469402|dbj|BAE71409.1| lipophorin receptor [Bombyx mori]
Length = 886
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 154/374 (41%), Gaps = 83/374 (22%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C G +CV L+ CD PDCS+G DE CN C +F+CG GKCI
Sbjct: 133 CGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQMRWV 191
Query: 219 ----------------------PES-------------WKCDGFVDCLEDGSDEPNTCIH 243
P+S W CDG VDC DGSDE C+
Sbjct: 192 CDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCISAWWHCDGDVDCA-DGSDEVG-CVS 249
Query: 244 Q------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C + + +C C+ W+CD + DC D DE C G V C
Sbjct: 250 TPKVRSPCISTEFECNDRITCVHRAWVCDGDHDCP-----DGGDE---ALELC-RGNVTC 300
Query: 298 ALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
L + CIP C+ DC D +DE + +C E CG
Sbjct: 301 RLDQFQCKDHSCIPGALYCNGVKDCP-----DGSDE---YNCTRQKTICDKRTEFDCGGG 352
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN- 407
C+ LSK CD DC N EDE + +CE N CS +C TP G C C G
Sbjct: 353 -MCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKL 411
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
N+T C D DEC GSC Q C N ++ C C GY P + T + P S+
Sbjct: 412 IDNRT-CEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDR--TRCKATEGHP-SL 467
Query: 467 IFSSTVDIRRIHLN 480
+F+ DIR+I L+
Sbjct: 468 LFARKHDIRKISLD 481
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 144/380 (37%), Gaps = 95/380 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + +C ++ +C+ ++ C+G DC + DE E CT +F C G+CIP S
Sbjct: 50 CPMKQFQC-ANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCKTGRCIPLS 108
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDDIV 277
WKCD DC + ++P C + C + C +C+P W+CD+ DCS +D+
Sbjct: 109 WKCDNEKDCSDSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA 168
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCALSK------------KCIP 305
N D+F C NG +V+C +CI
Sbjct: 169 CNETCRSDEF-TCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCIS 227
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD ++DC+ D +DE C E C CV + CDG D
Sbjct: 228 AWWHCDGDVDCA-----DGSDEVGCVSTPKVRSPCISTEFECNDRITCVHRAWVCDGDHD 282
Query: 366 CSNGEDE--------------------------GPFCNNKADCENLKCSHKCSPTPR--- 396
C +G DE +CN DC + + C+
Sbjct: 283 CPDGGDEALELCRGNVTCRLDQFQCKDHSCIPGALYCNGVKDCPDGSDEYNCTRQKTICD 342
Query: 397 --------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
G MC CP ++ + +C + + +G C Q C +T + Y
Sbjct: 343 KRTEFDCGGGMCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYY 402
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C C +GY L D ++C ++
Sbjct: 403 CDCEKGYKL-IDNRTCEDID 421
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCI 259
N C QF C GKCIP +W C+G DC ++ + C C + + +C + +CI
Sbjct: 47 NGACPMKQFQCANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCK-TGRCI 105
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 316
P +W CD E DCS D++DED K C + C +C+P W+CD+ DC
Sbjct: 106 PLSWKCDNEKDCS-----DSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDC 160
Query: 317 S--TDDIVDNTDEDWDKYFSHNAV--------------------------LCHPNELRCG 348
S +D+ N D++ N C P
Sbjct: 161 SDGSDEKACNETCRSDEFTCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSC 220
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ CDG DC++G DE
Sbjct: 221 TDGQCISAWWHCDGDVDCADGSDE 244
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +RS +V+ +++WP+ L +D + +YW D+ +NT+ S DGS ++ H
Sbjct: 604 KIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTISSCNYDGSGRRLILH 663
Query: 167 PNEL 170
E+
Sbjct: 664 STEV 667
>gi|348558906|ref|XP_003465257.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Cavia porcellus]
Length = 1905
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 159/332 (47%), Gaps = 45/332 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDPDCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLC-RNGRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAM-CFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
KC T RGA+ C C G + C D +EC +G C Q CTN+ ++ C C GY
Sbjct: 367 QKCQ-TVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYE 425
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
LRPD +SC A+ EP ++F++ +DIR++
Sbjct: 426 LRPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDLSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSSRKVL 940
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE+A M G R+ L+ N+ WP+ L +D L W D+H +E+ + G + L
Sbjct: 1191 KLERAAMDGSERTVLINNNLGWPNGLTVDKVSSQLLWADAHTERIEAADLSGGNRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVLC 165
R+E + G R LV +N+ P ++V+ + ++YW D N +E +DGS VL
Sbjct: 1147 RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGLMYWTDWGENAKLERAAMDGSERTVLI 1206
Query: 166 HPN 168
+ N
Sbjct: 1207 NNN 1209
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|345485108|ref|XP_001602954.2| PREDICTED: vitellogenin receptor [Nasonia vitripennis]
Length = 1845
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 148/381 (38%), Gaps = 91/381 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E RC C+ C+G DC + DE C F C G CIP +W+C
Sbjct: 990 CSPDEFRC-RDGACITKYFVCNGINDCDDFSDEEDCGGHACDDYSFKCNSGPCIPRNWEC 1048
Query: 225 DGFVDCLEDGSDEPNTC--------IHQCFNG---------------------------- 248
DG VDC DGSDE ++C + +C NG
Sbjct: 1049 DGQVDC-NDGSDEHDSCRPTDCAKGMFKCSNGRCVDVLLYCNGSDDCDDNSDEADCPENK 1107
Query: 249 ----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
Q +C S CI CD+ DC D D +C +
Sbjct: 1108 RVEALFCNKDQFKCKNSTLCIHDTLRCDDHPDCPHHD-------DEHGCGRCLDETQFSC 1160
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED--------------------WDKYFSHNAV 338
+ KC+P W+CD DC DN+DE + A
Sbjct: 1161 RNGKCVPVEWMCDNMDDCG-----DNSDEQNAHCEALKHGPNTTASTALGTTPGLTERAH 1215
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C + C ++ C+ L FCDGK C +G DEG CN CE C + C TP G
Sbjct: 1216 KCSEGKFAC-ATGYCLPLDMFCDGKEHCLDGSDEGGQCNTT--CETNTCENVCHKTPVGP 1272
Query: 399 MCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
+C C G ++ C D DEC + C Q C N S+VCSC EGY LR + SC A
Sbjct: 1273 VCSCRVGYELADDEKSCRDVDECK-NNVCQQLCENRPGSFVCSCYEGYALRINRVSCKAT 1331
Query: 457 NVPQDEPASIIFSSTVDIRRI 477
PA + +++ D RI
Sbjct: 1332 G-----PAVKLIAASKDDIRI 1347
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 140/309 (45%), Gaps = 66/309 (21%)
Query: 207 PGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPN--------TCIHQCFNGQVQCALSKK 257
P F C + CI + + CDG DC D SDE + T + C + QC
Sbjct: 39 PHYFKCKTVAVCIAQYFVCDGENDC-GDNSDEIDCHPQRTKPTFVKPCEPNEFQCHDQVH 97
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH--------QCFNGQVQCALSKKCIPHNWL 309
CIP CD+E DC +D +DE ++ H +C NG C SK NW
Sbjct: 98 CIPIEQYCDDEPDC-----MDGSDE-FENCHLNKTCAGFKCKNGH--CLHSK-----NWT 144
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN------ELRCGSSNQCVALSKFCDGK 363
CD DC DN+DE+ N+ + N CG+ +C++LS CDGK
Sbjct: 145 CDGVNDCE-----DNSDEE----NCENSPIAPENCNNTIGRYLCGNK-RCISLSHTCDGK 194
Query: 364 PDCSNGEDEGPFCNNKADCENL----------KCSHKCSPTPRGAMCFCPAGQNPNKTQC 413
DC +G DE NKA+C+ C+ C+ TP G+ C+C G N T C
Sbjct: 195 DDCGDGSDE-----NKANCDKALTNCKNSTTNSCNQNCAATPAGSKCWCHPGYVLNGTVC 249
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC G C Q C NT S+ C C GY L+ DG SC A N A +IF++
Sbjct: 250 EDIDECKEYGRCSQGCRNTIGSFFCQCAYGYKLQDDGVSCKAEN----GEALMIFAAKSS 305
Query: 474 IRRIHLNGS 482
IR +L+ +
Sbjct: 306 IRGYYLDSA 314
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 147/357 (41%), Gaps = 78/357 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E C S +C+ S CD +C + DE N C+P +F C G CI + + C
Sbjct: 951 CQPDEFAC-RSGECINKSNRCDSVFNCQDRSDEEKCENHTCSPDEFRCRDGACITKYFVC 1009
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-D 283
+G DC +D SDE + H C + +C S CIP NW CD ++DC+ D +DE D
Sbjct: 1010 NGINDC-DDFSDEEDCGGHACDDYSFKCN-SGPCIPRNWECDGQVDCN-----DGSDEHD 1062
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP 342
+ C G +C+ + +C+ C+ DC DN+DE D + A+ C+
Sbjct: 1063 SCRPTDCAKGMFKCS-NGRCVDVLLYCNGSDDCD-----DNSDEADCPENKRVEALFCNK 1116
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----------------------FCNNKA 380
++ +C +S C+ + CD PDC + +DE C+N
Sbjct: 1117 DQFKCKNSTLCIHDTLRCDDHPDCPHHDDEHGCGRCLDETQFSCRNGKCVPVEWMCDNMD 1176
Query: 381 DC------ENLKC---SHKCSPTPRGAMCFCPAGQ------NPNKTQCV----------- 414
DC +N C H + T A+ P + K C
Sbjct: 1177 DCGDNSDEQNAHCEALKHGPNTTASTALGTTPGLTERAHKCSEGKFACATGYCLPLDMFC 1236
Query: 415 DADECLIDGS--------------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
D E +DGS C+ C T + VCSC GY L D KSC V+
Sbjct: 1237 DGKEHCLDGSDEGGQCNTTCETNTCENVCHKTPVGPVCSCRVGYELADDEKSCRDVD 1293
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI-PESWK 223
C PNE +C C+ + ++CD +PDC +G DE C+ T F C G C+ ++W
Sbjct: 85 CEPNEFQCHDQVHCIPIEQYCDDEPDCMDGSDEFENCHLNKTCAGFKCKNGHCLHSKNWT 144
Query: 224 CDGFVDCLEDGSDEPN-----TCIHQCFN--GQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC ED SDE N C N G+ C +K+CI + CD + DC
Sbjct: 145 CDGVNDC-EDNSDEENCENSPIAPENCNNTIGRYLCG-NKRCISLSHTCDGKDDCG---- 198
Query: 277 VDNTDED 283
D +DE+
Sbjct: 199 -DGSDEN 204
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLCH 166
+ A M G NR+ V NI WP+ L IDY LYW D+ L +ES+ +DG+ VL H
Sbjct: 435 ISVAYMDGSNRTFFVKDNIGWPNGLTIDYPSSRLYWVDARLKVIESISLDGTDRRTVLRH 494
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++ P+ EI ++ + G N+ +V N+ S L IDY++ ILYW D +LN++E
Sbjct: 1478 YEKPSSEIV-------RSDLMGANQKVIVRDNLGIISGLTIDYHRSILYWSDKYLNSIEG 1530
Query: 154 VRVDGSHNAVL 164
V DG + +
Sbjct: 1531 VDFDGKNRKAI 1541
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 110/294 (37%), Gaps = 48/294 (16%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPS-SLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++KA M+G + + + P SL D + +YWCD +ES G H +
Sbjct: 739 IDKAQMNGLGSRTHLIEGLYGPKISLAYDRDTKRIYWCDEGTGRIESFDTQGQHRTLFR- 797
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECTPGQFSCGMGKCIPESW 222
G N V+L+ + E E N + PG G + +
Sbjct: 798 ------GGVNGLVSLAVL---DNEVFWTERERNRLNWVDKKQVVPGY----KGVNLEVTS 844
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI---PHNWLCDEEMDCSTDDIVDN 279
+ D + + DG T H C C S C+ LC C D ++++
Sbjct: 845 QTDAILLSVIDGPYSGET--HACRKNNGDC--SHICLVTDASKRLCA----CPADFVINS 896
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ C + +++C+++ CI C+ MDC D DE + N+
Sbjct: 897 DQKTCRPKTACSDDEIKCSVNNLCIKKIQKCNYVMDCP-----DGEDEKDCDSIAVNS-K 950
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
C P+E C S +C+ S CD +C + DE CEN H CSP
Sbjct: 951 CQPDEFAC-RSGECINKSNRCDSVFNCQDRSDE-------EKCEN----HTCSP 992
>gi|426228997|ref|XP_004008580.1| PREDICTED: low-density lipoprotein receptor [Ovis aries]
Length = 845
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 163/380 (42%), Gaps = 82/380 (21%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
+V C + CG N+C++ S CDG+ DC NG DE C+ +F C GKCI
Sbjct: 64 KSVTCKMGDFSCGGRVNRCISESWRCDGQKDCENGSDEEGCPPKTCSQDEFRCNDGKCIA 123
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD +DCL DGSDE + + C QC S CIP W C D D+
Sbjct: 124 PKFVCDLDLDCL-DGSDEASCPMPTCSPANFQCN-SSMCIPQLWA------CDGDPDCDD 175
Query: 280 TDEDWDKF-------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
++W K + C + C S +CI +W CD + DC D +D
Sbjct: 176 GSDEWPKHCGSPHPSGPPKDDNPCSALEFHCG-SGECIHSSWRCDSDPDCK-----DKSD 229
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP-- 374
E+ + C P+E +C S C+ S+ CD +PDC + D EGP
Sbjct: 230 EE-----NCAVATCRPDEFQC-SDGTCIHGSRQCDREPDCKDLSDELGCVNVTLCEGPNK 283
Query: 375 -------------FCNNKADC-----ENLK-------------CSHKCSPTPRGAMCFCP 403
CN+ DC E LK CSH C+ G C CP
Sbjct: 284 FKCHSGECISLDKVCNSIRDCRDWSDEPLKDCGTNECLDNKSGCSHICNDLKIGYECLCP 343
Query: 404 AG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G Q +K +C D DEC +C Q C N SY C C EG+ L P K+C AV
Sbjct: 344 EGFQLVDKHRCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVGT---- 399
Query: 463 PASIIFSSTVDIRRIHLNGS 482
A + F++ ++R++ L+ S
Sbjct: 400 IAYLFFTNRHEVRKMTLDRS 419
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIPH 261
C +F C GKCI W CDG +C +DGSDE TC C G C +CI
Sbjct: 27 CARNEFQCRDGKCISYKWVCDGTAEC-QDGSDESQETCKSVTCKMGDFSCGGRVNRCISE 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD + DC + +DE+ C + +C KCI ++CD ++DC
Sbjct: 86 SWRCDGQKDCE-----NGSDEEGCPPKTCSQDEFRCN-DGKCIAPKFVCDLDLDC----- 134
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+D +DE S C P +C SS
Sbjct: 135 LDGSDE-----ASCPMPTCSPANFQCNSS 158
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 22/145 (15%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--N 92
D DW + Y+ + GT ++A + ++L Q++ + ++ +
Sbjct: 479 DGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTL--FQEEGSKPRAIVVDPVHGFMYWT 536
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
W PA ++K G++G + LVT++IQWP+ + +D + LYW DS L+++
Sbjct: 537 DWGTPA--------EIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSIS 588
Query: 153 SVRVDGSHNAV-------LCHPNEL 170
S+ V+G + L HP L
Sbjct: 589 SIDVNGGNRKTVLEDKKKLAHPFSL 613
>gi|449681620|ref|XP_002155685.2| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Hydra magnipapillata]
Length = 891
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/289 (33%), Positives = 137/289 (47%), Gaps = 30/289 (10%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN---TCIH--QCFNGQVQCALSK 256
N C +++C +CIP W CD DC D SDE N +H +C + +C S
Sbjct: 166 NITCINDEYTCQNKRCIPSGWLCDKNNDC-GDNSDELNCHNKTLHTPECSDDLWKCH-SG 223
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+CI W CD + DC+ D +DE C + +C ++C+ + CD +DC
Sbjct: 224 ECIKSKWKCDFKDDCT-----DKSDEIGCDLLLCDHNNFKCKHGEQCLLPKYRCDGLVDC 278
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ D +DED S +C N +C + C+ CD K DC NGEDE C
Sbjct: 279 T-----DGSDEDDCDTVSE---ICTTNHFKCSDNKTCIDWKNVCDKKSDCPNGEDESNSC 330
Query: 377 N-NKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNT 432
N+ + N CSH C+ G +C C G N +T C D +EC I GSC Q C NT
Sbjct: 331 YINECEHYNGDCSHICTNLKIGYVCSCKPGYTLSNDGRT-CEDINECEIHGSCHQICHNT 389
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ SY CSC E Y ++ D SC + I F++ DIR+ L+G
Sbjct: 390 NGSYYCSCAENYVMQLDKVSCKT-----NVEGWIYFANRRDIRKFSLSG 433
>gi|195054555|ref|XP_001994190.1| GH23433 [Drosophila grimshawi]
gi|193896060|gb|EDV94926.1| GH23433 [Drosophila grimshawi]
Length = 1030
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 156/373 (41%), Gaps = 73/373 (19%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI-- 218
A C P+E C S +CV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 222 ARTCSPDEYSCKSGEGECVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQR 280
Query: 219 --------------------------------------PESWKCDGFVDCLEDGSDE--- 237
+ W CDG DC +D SDE
Sbjct: 281 RWVCDHDDDCGDGSDERECPVLPCDPVAEHTCTNGACIAKRWVCDGDPDC-QDASDERSC 339
Query: 238 --PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNG 293
+ C + QC C+ H+WLCD + DC D DE K C
Sbjct: 340 ANATKLVTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHASSCKNITCRPD 394
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC + CI + C+ + DC+ D +DE + +H+ ++ CG QC
Sbjct: 395 QFQCG-DRSCIAGHLTCNGQADCA-----DGSDERDCQLSAHSKGCNATSQFDCGGG-QC 447
Query: 354 VALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNP 408
+ LSK CD + DC +GEDE G N+ +N C H+C G C C G
Sbjct: 448 IPLSKVCDKRKDCPDGEDEPAGKCGQNECAIKNGNCMHRCVDHLVGYSCDCHQGYKLSGD 507
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASII 467
N+T C+D +EC G C Q C N + C C GY P + C A + AS++
Sbjct: 508 NRT-CLDVNECEQPGVCSQICVNEVGGFKCECEAGYMRDPRNHTRCKAT----EGHASLL 562
Query: 468 FSSTVDIRRIHLN 480
+ DIR+I L+
Sbjct: 563 LARRHDIRKIALD 575
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 141/349 (40%), Gaps = 74/349 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPESW 222
C NE +C + +QC+ + CDG DC + DE C+P ++SC G G+C+P +W
Sbjct: 185 CPNNEFKCKTVDQCIPRNWLCDGSNDCRDKSDEAQCKARTCSPDEYSCKSGEGECVPLAW 244
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-------------------------- 256
CD DC DGSDE N C C + + C +
Sbjct: 245 MCDQSKDC-SDGSDEHN-CNQTCRSDEFTCGNGRCIQRRWVCDHDDDCGDGSDERECPVL 302
Query: 257 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
CI W+CD + DC + C + QC C
Sbjct: 303 PCDPVAEHTCTNGACIAKRWVCDGDPDCQDASDERSCANATKLVTPCLAHEYQCKDRITC 362
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
+ H+WLCD + DC D D + S + C P++ +CG + C+A C+G+
Sbjct: 363 LHHSWLCDGDRDCP--------DGDDEHASSCKNITCRPDQFQCGDRS-CIAGHLTCNGQ 413
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR----GAMCF-----------CPAGQNP 408
DC++G DE DC+ S C+ T + G C CP G++
Sbjct: 414 ADCADGSDE-------RDCQLSAHSKGCNATSQFDCGGGQCIPLSKVCDKRKDCPDGEDE 466
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+C + + +G+C C + + Y C C +GY L D ++C VN
Sbjct: 467 PAGKCGQNECAIKNGNCMHRCVDHLVGYSCDCHQGYKLSGDNRTCLDVN 515
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 86/212 (40%), Gaps = 60/212 (28%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPH 261
A C+ F C G CIP W+CD DC DGSDE + C++ C N + +C +CIP
Sbjct: 143 ATCSTDHFRCTNGNCIPNKWRCDQENDC-SDGSDEASALCMNACPNNEFKCKTVDQCIPR 201
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDD 320
NWLCD DC D +DE K C + C + +C+P W+CD+ DCS
Sbjct: 202 NWLCDGSNDCR-----DKSDEAQCKARTCSPDEYSCKSGEGECVPLAWMCDQSKDCS--- 253
Query: 321 IVDNTDEDWDKYFSHN-AVLCHPNELRCG------------------------------- 348
D +DE HN C +E CG
Sbjct: 254 --DGSDE-------HNCNQTCRSDEFTCGNGRCIQRRWVCDHDDDCGDGSDERECPVLPC 304
Query: 349 --------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDC + DE
Sbjct: 305 DPVAEHTCTNGACIAKRWVCDGDPDCQDASDE 336
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 698 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 757
Query: 167 PNE 169
E
Sbjct: 758 STE 760
>gi|339248623|ref|XP_003373299.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
gi|316970626|gb|EFV54529.1| putative Low-density lipoprotein receptor domain class A [Trichinella
spiralis]
Length = 4939
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 112/212 (52%), Gaps = 20/212 (9%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----CNAECTPGQFSCGMGKCIPESWKC 224
+ +C ++ C+ CDG DC + DE P N CTP QF C GKCIP++W C
Sbjct: 3957 QFKCNNTGHCLPKRYQCDGDNDCGDNSDESPEICQNVNNTCTPEQFKCNNGKCIPKAWYC 4016
Query: 225 DGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DC D SDEP + CI Q C G C S +CIP+ C+ + DC DN+DE
Sbjct: 4017 DADDDC-GDNSDEPASVCIGQACPRGWSHCISSYRCIPNWAFCNGQDDCR-----DNSDE 4070
Query: 283 DWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ ++ C G QC S +CIP W+CD E DC DN+DE+ D H+ V C
Sbjct: 4071 NLERCPTCDAFGDFQCLTSGRCIPARWMCDFENDCG-----DNSDEE-DPSCLHSPVQCS 4124
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+E RC S +C+ S C+G+ +C +G DE
Sbjct: 4125 ESEFRC-LSGKCIRKSLICNGEMNCVDGSDEA 4155
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/298 (31%), Positives = 139/298 (46%), Gaps = 35/298 (11%)
Query: 202 NAECTPGQFSC------GMGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQ 251
N C+ +F+C G +CIP+SW CDG V+C + + P C + C G+ +
Sbjct: 3300 NRTCSADEFACESNRALGRFECIPKSWVCDGEVNCRDAEDESPALCGNRQLAPCNKGEFR 3359
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLC 310
CA + CI ++W+CD + DC +D +DE + + C QC +KKCIP W+C
Sbjct: 3360 CA-NGHCIHNSWVCDHDNDC-----LDGSDEPENCTYTSCSASYFQCR-NKKCIPSQWVC 3412
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC DN DE+ + C + C C+ K C+G+ DC +G
Sbjct: 3413 DGHNDCG-----DNYDEENCTHTGDAG--CMKGQYEC-HDGTCIPEEKVCNGRADCEDGS 3464
Query: 371 DEGPFC--NNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLID-GS 424
DE C N C HKC P G C C G +K C+D +EC ID
Sbjct: 3465 DESSLCGINECKSAAKALCEHKCVDKPIGYECQCLPGFRLDQGDKKSCIDINECEIDLPP 3524
Query: 425 CDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C Q C N S+ C+C E Y + D +SC ++ + ++ ++ IR+I ++G
Sbjct: 3525 CSQYCINKIGSFKCACNETYYEVAADSQSCKRID--ESVEPFLLLANRYYIRKISMDG 3580
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 147/341 (43%), Gaps = 50/341 (14%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSC-GMGKCIPESWKCDG 226
C SS +C+ FC+G+ DC + DE P C+A G F C G+CIP W CD
Sbjct: 4045 CISSYRCIPNWAFCNGQDDCRDNSDENLERCPTCDAF---GDFQCLTSGRCIPARWMCDF 4101
Query: 227 FVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DC ++ +E +C+H QC + +C LS KCI + +C+ EM+C VD +DE
Sbjct: 4102 ENDCGDNSDEEDPSCLHSPVQCSESEFRC-LSGKCIRKSLICNGEMNC-----VDGSDEA 4155
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-- 341
H C G +C+ C+ CD DCS N + W + S + C
Sbjct: 4156 GCDKHVCPFGTKKCS-DHTCLNEKLFCDRRPDCSDGSDEANCTDKWRRTCSPHEFSCANV 4214
Query: 342 ------PNELRCGSSNQCVALSKFCDGKPDCSNGE--DEGPFCNNKADCENLKCSHKCSP 393
P + RC S C++ ++ CDG DC + + DEG C+N +C
Sbjct: 4215 ESKCDPPLKFRCQFSRICLSFTRVCDGSYDCGDFDVSDEGIQCHNPT----FQCDENAFK 4270
Query: 394 TPRGAMCFCPAGQNPNKTQC---VDADECLID------GSCDQTCTNTHLSYVCSCTEGY 444
+C P + C D D C ID +C Q C N SY C C + Y
Sbjct: 4271 CATAGICIPPEKVCDHVDDCGDRSDEDGCHIDECATFNNTCSQICVNRKGSYDCLCAKNY 4330
Query: 445 TLRPD-----GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
T GK C A + +PA + +++ + + ++
Sbjct: 4331 TSAIHIGDMLGKDCRA----EGDPADLFLATSNSVNMLEIS 4367
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 150/366 (40%), Gaps = 62/366 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESW 222
C + +C +++C+ CD DC +G DE C N C+ QF C G+CIP W
Sbjct: 1421 CSGKKFQC-KNHRCIPEQWICDSDNDCGDGSDEDFDLCSNRTCSAPQFRCTNGRCIPVYW 1479
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDC---------- 271
CDG DC + ++P C C + +C ++CI N CD DC
Sbjct: 1480 LCDGDDDCYDGADEDPLRCPPVSCRAQEFRCLNLRQCIALNKHCDGNEDCEDGSDEEGCM 1539
Query: 272 -----------------------STDDIVDNTDE-DWD----KFHQCFNGQVQCALSKKC 303
TD +V + DW K+ N + K
Sbjct: 1540 SAYVFQNSGFAMGRKTVTMALMSKTDTVVSIYRQFDWRDQSVKWIHFLNFSIYFNFQKTM 1599
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKY-------FSHNAVL----CHPNELRCGSSNQ 352
+ + + + +M + ++ W +AVL C +C S
Sbjct: 1600 LARSIISNAKMVIAF--LMHGFVMVWTTVPTALMNPLQQDAVLMSTNCSHGFWKCPRSKD 1657
Query: 353 --CVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQN-P 408
C+ L K CDGK DC NG+DEGP C N CS++C P G+ C CP G+
Sbjct: 1658 TFCLPLDKVCDGKADCPNGDDEGPGCTLNSCISGQRYCSYQCHAGPDGSFCICPRGEALI 1717
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
+ + C D +EC SC Q C NT SY+CSC + Y LR D ++C A+ EP +
Sbjct: 1718 DDSICADVNECNDHASCSQLCENTKGSYICSCDKQYELRSDKQTCKAIG---KEPMRLYV 1774
Query: 469 SSTVDI 474
S+ I
Sbjct: 1775 SNRYRI 1780
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 167 PNELRCG--------SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAE--CTPGQFSCG 213
P EL CG ++ C+ CDG+ DC +G DE G C+ E C+P Q C
Sbjct: 1325 PLELPCGNNETHFACANGACILREWVCDGEDDCRDGSDEIKDGKPCSVEKTCSPSQIMCN 1384
Query: 214 -MGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CIP + CDG DC + ++P C I C + QC + +CIP W+CD +
Sbjct: 1385 NTRRCIPRQYACDGDNDCGDYSDEDPRYCEGGVIPTCSGKKFQCK-NHRCIPEQWICDSD 1443
Query: 269 MDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC D +DED+D C Q +C + +CIP WLCD + DC D
Sbjct: 1444 NDCG-----DGSDEDFDLCSNRTCSAPQFRCT-NGRCIPVYWLCDGDDDCYDGADEDP-- 1495
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C E RC + QC+AL+K CDG DC +G DE
Sbjct: 1496 ------LRCPPVSCRAQEFRCLNLRQCIALNKHCDGNEDCEDGSDE 1535
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 67/143 (46%), Gaps = 15/143 (10%)
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
K+C P + CD DC DN+DE+ A C ++ C + C+ LS C
Sbjct: 525 KRCQPVKFRCDYYDDCG-----DNSDEE-----DCGAYQCPRDQWNCPGTGHCIPLSNLC 574
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN---PNKTQCVDAD 417
D DC+NG DE +++ C L CS C +P G +C CP+G N+ C D D
Sbjct: 575 DSHNDCANGADEKNC--SRSLCSALSCSFVCRASPDGGVCDCPSGYRVNQQNRRNCEDVD 632
Query: 418 ECLIDGSCDQTCTNTHLSYVCSC 440
EC G CDQ C N Y C C
Sbjct: 633 ECKEYGYCDQKCFNAEPGYHCEC 655
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 137/341 (40%), Gaps = 89/341 (26%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ------------------------- 138
L + + GM G + LV ++I WP+++ +DY
Sbjct: 3705 LSPYVARIGMDGTDFVKLVERDIVWPNAITVDYFTERIFWGDAHFNEIWYMDMDGSRIEH 3764
Query: 139 ----------------DILYWCDSHLNTVESVRVDGSHNAVLCH-----PNELR------ 171
D LYW D ++ ++ + V+ PN+L+
Sbjct: 3765 IPVKFAPHIFSLTQFDDYLYWSDWNIKSIVRAHKHRLDDEVVILQTVQLPNDLQIVHPLD 3824
Query: 172 -------CGSSNQCVALSKFCDGKPDCSNGEDEGP----------FCNAECTPGQFSCGM 214
CGS+N S C P ++ E P C + CT Q+ CG
Sbjct: 3825 QLNWTNPCGSNNG--GCSHLCLISPGGNSYRCECPQYFILLNDNRTCISNCTANQWRCGG 3882
Query: 215 G--KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDC 271
CIP WKCDG DC +DGSDEP +C + C G+ QC + C +CD
Sbjct: 3883 NDDHCIPLLWKCDGEKDC-QDGSDEPESCPQRICLVGEFQCD-NHNCTRPFQICD----- 3935
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
DD DN+DE + C + Q +C + C+P + CD + DC DN+DE +
Sbjct: 3936 GIDDCGDNSDER-NCDAPCDHWQFKCNNTGHCLPKRYQCDGDNDCG-----DNSDESPEI 3989
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ N C P + +C ++ +C+ + +CD DC + DE
Sbjct: 3990 CQNVNNT-CTPEQFKC-NNGKCIPKAWYCDADDDCGDNSDE 4028
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 12/182 (6%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC---FNGQVQCALSKKCIPHNW 263
P F+CG G+CIP + CDG C ++ +E C+ + N CA +++CI +
Sbjct: 3049 PNDFACGSGECIPYTLTCDGTPHCSDESDEETLFCVFRTCPDENRYYTCA-NRRCILKHQ 3107
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+C+ E DC D D T+ H C G +C S CI + +CD + DC D
Sbjct: 3108 VCNGEDDCG--DFSDETNCGTADIHNCGEGMFRCP-SGLCINNTLICDGKNDCQ-----D 3159
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
N ++ + + C + RC ++N C+ + CDG DC + DE P +C
Sbjct: 3160 NAADESNTTCPGLPINCRGAKRRCPNTNICITPADLCDGHNDCGDNADEEPLFCMTMECG 3219
Query: 384 NL 385
L
Sbjct: 3220 AL 3221
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 79/187 (42%), Gaps = 25/187 (13%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
H+ V C +E RC S +C+ S C+G+ +C +G DE C G C C+
Sbjct: 4118 HSPVQCSESEFRC-LSGKCIRKSLICNGEMNCVDGSDEAGCDKHVCPFGTKKCSDHTCLN 4176
Query: 220 ESWKCDGFVDCLEDGSDEPN-------TCIHQCFN-----------GQVQCALSKKCIPH 261
E CD DC DGSDE N TC F+ + +C S+ C+
Sbjct: 4177 EKLFCDRRPDC-SDGSDEANCTDKWRRTCSPHEFSCANVESKCDPPLKFRCQFSRICLSF 4235
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+CD DC D+ D + + QC +CA + CIP +CD DC
Sbjct: 4236 TRVCDGSYDCGDFDVSDEGIQCHNPTFQCDENAFKCATAGICIPPEKVCDHVDDCG---- 4291
Query: 322 VDNTDED 328
D +DED
Sbjct: 4292 -DRSDED 4297
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 104/230 (45%), Gaps = 24/230 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQ---FSCGMGK 216
N+ PN+ CGS +C+ + CDG P CS+ DE FC P + ++C +
Sbjct: 3043 NSTCIPPNDFACGSG-ECIPYTLTCDGTPHCSDESDEETLFCVFRTCPDENRYYTCANRR 3101
Query: 217 CIPESWKCDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CI + C+G DC D SDE N IH C G +C S CI + +CD + DC
Sbjct: 3102 CILKHQVCNGEDDC-GDFSDETNCGTADIHNCGEGMFRCP-SGLCINNTLICDGKNDCQ- 3158
Query: 274 DDIVDNTDEDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D+ D ++ C + +C + CI LCD DC DN DE +
Sbjct: 3159 DNAADESNTTCPGLPINCRGAKRRCPNTNICITPADLCDGHNDCG-----DNADE--EPL 3211
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NNK 379
F + C +RC + +C+ + CDG DC +G DE C NNK
Sbjct: 3212 FCM-TMECGALHVRC-PNGRCIPETWQCDGDNDCGDGWDEKQNCEPSNNK 3259
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTP----GQFSCGMGKCIP 219
C P+++ C ++ +C+ CDG DC + DE P +C P +F C +CIP
Sbjct: 1376 CSPSQIMCNNTRRCIPRQYACDGDNDCGDYSDEDPRYCEGGVIPTCSGKKFQCKNHRCIP 1435
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCALSKKCIPHNWL 264
E W CD DC DGSDE + C ++ C Q +C + +CIP WL
Sbjct: 1436 EQWICDSDNDC-GDGSDEDFDLCSNRTCSAPQFRCT-NGRCIPVYWL 1480
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDL---PAPEI--FPLDERLEKAGMHGENRSPLVTKNI 126
I N + R I+DL D+ P I F +++LE+A M G NR +V+ +
Sbjct: 780 IDVSNFAGDRRTVLLIDDLTLPVDVALDPTRGIMFFTNEKKLERAAMDGRNRQVIVSNHT 839
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+S+ +D +YWCD ++ +E++ DG+ V+
Sbjct: 840 YQITSVALDLISRRVYWCDPKIDLIETILYDGTDRRVI 877
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 119/307 (38%), Gaps = 68/307 (22%)
Query: 121 LVTKNIQW--PSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-NAVLCHPNELRCGSSNQ 177
LV +NI P LVID+++D L W DS L + + GS A+ P + Q
Sbjct: 1163 LVYRNISLGRPGGLVIDFDRDELCWADSALKHIHCGNMLGSKIRAIEISPRPI-----PQ 1217
Query: 178 CVALS----KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+A+ F +P ++ T GQ + + +S+ G + L+
Sbjct: 1218 ALAILGNDLYFIHSQPSSIRKVNK-------ITGGQST------VLQSFSSLGNLYGLKA 1264
Query: 234 GS--DEPNTCIHQCFNG-------------QVQCALSK-KCIPHNWLCDEEMDCSTDDIV 277
S +EP+ + C NG V+ + K C L +C+
Sbjct: 1265 CSLLNEPSFPDNPCLNGGGCEKFCFYVPGTSVRPGMKKCGCSQGEMLAPNGRNCTR---- 1320
Query: 278 DNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
N DE + C N + A + CI W+CD E DC D +DE D
Sbjct: 1321 -NPDEPLEL--PCGNNETHFACANGACILREWVCDGEDDCR-----DGSDEIKDGKPCSV 1372
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC---------NNKADCENLK 386
C P+++ C ++ +C+ CDG DC + DE P +C K C+N
Sbjct: 1373 EKTCSPSQIMCNNTRRCIPRQYACDGDNDCGDYSDEDPRYCEGGVIPTCSGKKFQCKN-- 1430
Query: 387 CSHKCSP 393
H+C P
Sbjct: 1431 --HRCIP 1435
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 121 LVTKNIQWPSSLVIDY--NQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQ- 177
++ ++I + +VI + + ++ W + ++ D + C +C S
Sbjct: 1599 MLARSIISNAKMVIAFLMHGFVMVWTTVPTALMNPLQQDAVLMSTNCSHGFWKCPRSKDT 1658
Query: 178 -CVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSC 212
C+ L K CDGK DC NG+DEGP C C GQ C
Sbjct: 1659 FCLPLDKVCDGKADCPNGDDEGPGCTLNSCISGQRYC 1695
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+++A + R LV+ N+ P LV+D N +YW DS ++ ++ V+ G ++
Sbjct: 2568 IQQANLDFSGRKVLVSHNVIEPRDLVVDMNTHHIYWADSRMDMIQRVKPSGGDRQII 2624
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
+C +C P ++CD + DC D SDE + +QC Q C + CIP + LCD
Sbjct: 520 LACKNKRCQPVKFRCDYYDDC-GDNSDEEDCGAYQCPRDQWNCPGTGHCIPLSNLCDSHN 578
Query: 270 DCS 272
DC+
Sbjct: 579 DCA 581
>gi|169646705|ref|NP_957217.2| very low-density lipoprotein receptor precursor [Danio rerio]
Length = 866
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 154/362 (42%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG S QC+ + CDG+ DC NGEDE N C P +F+C G+C+ +
Sbjct: 109 CRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDEINCGNITCAPLEFTCSSGRCVSRKFV 168
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL--CDEEMDCSTDDIVDNTD 281
C+G DC DGSDE + C ++ C + CIP +WL D + +D+ +
Sbjct: 169 CNGEDDC-GDGSDEQDCAPSSCSPSEIPCG-NNTCIPRSWLCDDDVDCQDQSDESPERCG 226
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ +C ++QC S +CI W CD + DC D +DE + +A C
Sbjct: 227 HNPTPPAKCSPSEMQCG-SGECIHRKWRCDGDPDCK-----DGSDEK-----NCSARNCR 275
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------GPFC 376
P++ +C C+ S+ C+G DC +G DE C
Sbjct: 276 PDQFKC-DDGSCIHGSRQCNGFRDCVDGTDEVNCKNLTQCNSSDQFKCRSGECIEMSKVC 334
Query: 377 NNKADC------------------ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDAD 417
N DC N CSH C G C C P Q ++ C D +
Sbjct: 335 NKVRDCPDWSDEPIKECNMNECLINNGGCSHICRDLTIGFECDCTPGLQLIDRKTCGDVN 394
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
ECL G C Q C N Y C C GY + P C AV EP +IF++ DIR++
Sbjct: 395 ECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEPC-LIFTNRRDIRKL 450
Query: 478 HL 479
L
Sbjct: 451 GL 452
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 148/378 (39%), Gaps = 97/378 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +CG+ +C+ CDG DCS+G DE C F C G+CIP+ W+C
Sbjct: 29 CEQSQFQCGNG-RCIPSVWQCDGDMDCSDGSDETSCVRKTCAEVDFVCRSGQCIPKRWQC 87
Query: 225 DGFVDCLEDGSDEPNTCIH--QCFNGQVQCAL-SKKCIPHNWLCDEEMDC---------- 271
DG DC EDGSDE H C + C + S +CIP W CD E DC
Sbjct: 88 DGEPDC-EDGSDESIEMCHTRTCRVNEFSCGVGSTQCIPVFWKCDGEKDCDNGEDEINCG 146
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C ++ C + CIP +
Sbjct: 147 NITCAPLEFTCSSGRCVSRKFVCNGEDDCGDGSDEQDCAPSSCSPSEIPCG-NNTCIPRS 205
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHN---AVLCHPNELRCGSSNQCVALSKFCDGKP 364
WL C D + ++ + HN C P+E++CGS +C+ CDG P
Sbjct: 206 WL------CDDDVDCQDQSDESPERCGHNPTPPAKCSPSEMQCGSG-ECIHRKWRCDGDP 258
Query: 365 DCSNGEDE-----------------------GPFCN---------NKADCENL-KCSHKC 391
DC +G DE CN ++ +C+NL +C+
Sbjct: 259 DCKDGSDEKNCSARNCRPDQFKCDDGSCIHGSRQCNGFRDCVDGTDEVNCKNLTQCNSSD 318
Query: 392 SPTPRGAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCS 439
R C CP + +C + +ECLI +G C C + + + C
Sbjct: 319 QFKCRSGECIEMSKVCNKVRDCPDWSDEPIKEC-NMNECLINNGGCSHICRDLTIGFECD 377
Query: 440 CTEGYTLRPDGKSCTAVN 457
CT G L D K+C VN
Sbjct: 378 CTPGLQL-IDRKTCGDVN 394
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 45 DKYFKRILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEI 101
D+ K++++ +A+++ ++N + ++++ + L NS L P
Sbjct: 498 DESHKKVIDDVQMPVGIAVDWIYKNIYWSDLGSKSITVANFNGTKKKVLFNS-GLKEPAS 556
Query: 102 FPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH 147
+D ++EK+GM+G +R LV +IQWP+ + +D + LYW DS
Sbjct: 557 IAVDPLSGFLYWSDWGEPAKIEKSGMNGNDRQVLVETDIQWPNGITLDLIKGRLYWVDSK 616
Query: 148 LNTVESVRVDG-SHNAVLCHPNEL 170
L+ + SV ++G + VL P+ L
Sbjct: 617 LHMLCSVDLNGDNRRKVLQSPDYL 640
>gi|312231791|gb|ADO17799.1| vitellogenin receptor [Micropterus salmoides]
Length = 842
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/376 (31%), Positives = 157/376 (41%), Gaps = 72/376 (19%)
Query: 157 DGSHNAV------LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +V C NE CG+ S QC+ + CDG+ DC NGEDE N C P +
Sbjct: 96 DGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCDGEKDCDNGEDEVNCGNITCAPNE 155
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDE 267
F+ G+CI ++ C+G DC DGSDE C + QC S CIP +W D
Sbjct: 156 FTRASGRCISRNFVCNGEDDC-GDGSDEVECAPSSCGPSEFQCGSS--CIPASWVCDDDV 212
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ +D+ +C + ++QC S +CI W CD + DC D +DE
Sbjct: 213 DCQDQSDESPSRCGRHPTPPAKCSSSEMQCR-SGECIHKEWRCDGDPDCK-----DGSDE 266
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ C P++ +C N C+ S+ C+G DC++G DE GP
Sbjct: 267 -----ANCPVRTCGPDQFKCDDGN-CILGSRQCNGLRDCADGSDEVSCKNMTQCNGPEKF 320
Query: 375 ------------FCNNKADC------------------ENLKCSHKCSPTPRGAMCFC-P 403
CN DC N CSH C G C C P
Sbjct: 321 KCRGGECIEMSKVCNKARDCPDWSDEPIKECNLNECLLNNGGCSHICKDMVIGFECDCTP 380
Query: 404 AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
Q + C D +ECL G C Q C N Y C C GY + P C AV EP
Sbjct: 381 GLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTGVCKAVG---KEP 437
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIRR L
Sbjct: 438 C-LIFTNRRDIRRPGL 452
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 37/203 (18%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCAL 254
EC QF CG G+CIP W+CDG DC DGSDE N+C+ + C NGQ
Sbjct: 28 TECEASQFQCGNGRCIPSVWQCDGDEDCT-DGSDE-NSCVRKTCAEVDFVCRNGQ----- 80
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCD 311
C+P W CD E DC D +DE + H C + C A S +CIP W CD
Sbjct: 81 ---CVPKRWHCDGEPDCE-----DGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCD 132
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
E DC DN +++ + + C PNE +S +C++ + C+G+ DC +G D
Sbjct: 133 GEKDC------DNGEDE----VNCGNITCAPNEFT-RASGRCISRNFVCNGEDDCGDGSD 181
Query: 372 EGPFCNNKADCENLKCSHKCSPT 394
E + +C C P
Sbjct: 182 EVECAPSSCGPSEFQCGSSCIPA 204
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 152/402 (37%), Gaps = 126/402 (31%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ V+G+ C ++ +CG+ +C+ CDG DC++G DE C F C
Sbjct: 21 INVNGTKTE--CEASQFQCGNG-RCIPSVWQCDGDEDCTDGSDENSCVRKTCAEVDFVCR 77
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMD 270
G+C+P+ W CDG DC EDGSDE H C + C A S +CIP W CD E D
Sbjct: 78 NGQCVPKRWHCDGEPDC-EDGSDESVEICHMRTCRVNEFSCGAGSTQCIPIFWKCDGEKD 136
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCA------LSKKCIPHNWLCDEEMDCSTDDIVDN 324
C DN +++ + G + CA S +CI N++C+ E DC D
Sbjct: 137 C------DNGEDEVN------CGNITCAPNEFTRASGRCISRNFVCNGEDDCG-----DG 179
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGS----------------------------------- 349
+DE C P+E +CGS
Sbjct: 180 SDE-----VECAPSSCGPSEFQCGSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAK 234
Query: 350 ---------SNQCVALSKFCDGKPDCSNGEDE--------GP---------------FCN 377
S +C+ CDG PDC +G DE GP CN
Sbjct: 235 CSSSEMQCRSGECIHKEWRCDGDPDCKDGSDEANCPVRTCGPDQFKCDDGNCILGSRQCN 294
Query: 378 NKADCEN----------LKCSHKCSPTPRGAMCF-----------CPAGQNPNKTQCVDA 416
DC + +C+ RG C CP + +C +
Sbjct: 295 GLRDCADGSDEVSCKNMTQCNGPEKFKCRGGECIEMSKVCNKARDCPDWSDEPIKEC-NL 353
Query: 417 DECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ECL+ +G C C + + + C CT G L D K+C +N
Sbjct: 354 NECLLNNGGCSHICKDMVIGFECDCTPGLQL-IDHKTCGDIN 394
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 84/176 (47%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCST-DDIVDNTDE------DW---DKYFKRILNGTHTLALE-F 62
L +K I ++ L D+ D T + ++DN DW + Y+ + GT T+++ F
Sbjct: 484 LGQKAI-YSTLLDKRGDIGTHNKVIDNVQTPVGIAVDWIYKNLYWSDL--GTKTISVANF 540
Query: 63 NHRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
N Q + F + + +S+ + + W PA ++EK+GM+G +R L
Sbjct: 541 NGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPA--------KIEKSGMNGVDRQVL 592
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VLCHPNEL 170
V +IQWP+ + +D + LYW DS L+ + SV ++G + L HP L
Sbjct: 593 VATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSQDYLAHPFAL 648
>gi|242004500|ref|XP_002423121.1| vitellogenin receptor, putative [Pediculus humanus corporis]
gi|212506067|gb|EEB10383.1| vitellogenin receptor, putative [Pediculus humanus corporis]
Length = 1813
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 155/360 (43%), Gaps = 61/360 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C +S +C++ S CD DC +G DE C F C G CI +SW+C
Sbjct: 1034 CKSEDFHC-NSGECISKSWQCDYVKDCLDGSDELNCGTKTCGSNMFQCKTGTCITKSWEC 1092
Query: 225 DGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLC------------------ 265
DG +DC+ DGSDE + C + C QC + +CI +C
Sbjct: 1093 DGDIDCV-DGSDEHDKCQMTTCDTLDFQCG-NGRCISPKLICNGENDCGDRTDEMECKVY 1150
Query: 266 DEEMDCSTDDIVDNT--------------------DEDWDKFHQCFNGQVQCALSKKCIP 305
D E DC D+ + + ED C + QC + KCI
Sbjct: 1151 DYEADCGADEFLCSKANPKCVPQKSRCNGTAECPRGEDETDCSNCLPTEFQCK-NFKCIF 1209
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWD---KYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+ WLCD++ DC DN+DED + + L + C S +C+ + CDG
Sbjct: 1210 NKWLCDKDNDCG-----DNSDEDPELCSRRAGSVGFLQLCQDFTC-KSGECLPMHLVCDG 1263
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420
+C +G DEG C C++ C C+PTP A C C G + N C+D DEC
Sbjct: 1264 HKNCEDGSDEGGNCG--LSCKSNPCEQICTPTPVSARCACKQGYFLSANGHSCIDIDEC- 1320
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ C Q C NT + CSC E + L+ D +C A + S I S +IR++ N
Sbjct: 1321 AEEKCSQICHNTPGGFNCSCAEDFILKSDRVTCKA----KGGRMSFILSGDDEIRKVSNN 1376
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/349 (30%), Positives = 154/349 (44%), Gaps = 62/349 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +C ++ QC+A+ + CDG+ DCS+G DE C +C F C G+CI +SW+C
Sbjct: 996 CKENQFKC-TNGQCIAMIEKCDGENDCSDGSDE-ENCKTDCKSEDFHCNSGECISKSWQC 1053
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-D 283
D DCL DGSDE N C + QC + CI +W CD ++DC VD +DE D
Sbjct: 1054 DYVKDCL-DGSDELNCGTKTCGSNMFQCK-TGTCITKSWECDGDIDC-----VDGSDEHD 1106
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC + +CI +C+ E DC D TDE K + + A C +
Sbjct: 1107 KCQMTTCDTLDFQCG-NGRCISPKLICNGENDCG-----DRTDEMECKVYDYEAD-CGAD 1159
Query: 344 ELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKC------------ 387
E C +N +CV C+G +C GEDE N + C+N KC
Sbjct: 1160 EFLCSKANPKCVPQKSRCNGTAECPRGEDETDCSNCLPTEFQCKNFKCIFNKWLCDKDND 1219
Query: 388 ------------SHKCSPTPRGAMC---FCPAGQNPNKTQCVDADECLIDGS-------- 424
S + +C C +G+ D + DGS
Sbjct: 1220 CGDNSDEDPELCSRRAGSVGFLQLCQDFTCKSGECLPMHLVCDGHKNCEDGSDEGGNCGL 1279
Query: 425 ------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
C+Q CT T +S C+C +GY L +G SC ++ +E S I
Sbjct: 1280 SCKSNPCEQICTPTPVSARCACKQGYFLSANGHSCIDIDECAEEKCSQI 1328
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 151/336 (44%), Gaps = 43/336 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAEC-TPGQFSCGMGKCIPESW 222
C N+ C + +C++ K CDG DC N EDE N +C +P F C G+C+
Sbjct: 31 CDNNDFTC-LNGKCLSKDKVCDGFFDCDNAEDEENCEKNIKCVSPTWFKCKDGQCLSSLL 89
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------LSKKCIPHNWLCDEEMDC--STD 274
C+G DC ED SDEP C N V C+ L+K CI + W+CD + DC +D
Sbjct: 90 YCNGEYDC-EDHSDEPENCTADATN--VTCSPDEFTCLNKDCIQNTWVCDGQPDCLDGSD 146
Query: 275 DIVD-NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+ V T D +C N CI + CD E DC DN+DE+
Sbjct: 147 ETVGCGTKLDCHGGFKCKNHH--------CIIQEFHCDGENDCG-----DNSDEENCTMK 193
Query: 334 SHNAVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCEN-LK 386
H+ C+ C C+ CDG P C + DE N + C++ L
Sbjct: 194 FHSTDHCNKELGLFLCTDGIVCLDGDHVCDGFPHCFDNSDEIDCAKDQKLNSSYCKSVLG 253
Query: 387 CSHKCSPTP-RGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CSH C P + C CP G + + +C+D +EC G C Q C N + C C +G
Sbjct: 254 CSHDCHLAPNKNIFCTCPKGYKLDGSLKKCIDINECEEFGYCYQKCRNFIGGHQCYCDDG 313
Query: 444 YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
Y+L D ++C A A ++FSS IR ++L
Sbjct: 314 YSLMSDNRTCKAKG-----EALLLFSSLNTIRGVYL 344
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+GM G N LV KNI+WP+ + +D + D LYW D+ +ES+R+DGS V
Sbjct: 470 SGMDGSNPKTLVDKNIEWPNGIALDISNDRLYWVDAKATNIESIRLDGSDRQV 522
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
P+ E L + +N + LV+ ++ W S LV+D + LYW D + +E R DGS
Sbjct: 1502 PVSEILSYS-FEEQNSTLLVSTDLTWVSGLVVDRIRGYLYWSDLYYQVIEKTRFDGSQRQ 1560
Query: 163 VL 164
++
Sbjct: 1561 IV 1562
>gi|426387293|ref|XP_004060108.1| PREDICTED: low-density lipoprotein receptor [Gorilla gorilla
gorilla]
Length = 799
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 146/329 (44%), Gaps = 37/329 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
K+C AV PA+ S V +RR HL
Sbjct: 390 KACKAVG--SIAPAACPVYS-VPVRR-HL 414
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 105/225 (46%), Gaps = 26/225 (11%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG-- 213
G+ C NE +C +C++ CDG +C +G DE + C FSCG
Sbjct: 20 GTAVGDRCERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSEDFSCGGR 78
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+ +CIP+ W+CDG VDC ++GSDE C + +C KCI ++CD + DC
Sbjct: 79 VNRCIPQFWRCDGQVDC-DNGSDEQGCPPRTCSQDEFRCH-DGKCISRQFVCDSDRDC-- 134
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY- 332
+D +DE C QC S CIP W CD + DC D +DE W ++
Sbjct: 135 ---LDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHC 184
Query: 333 -----FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F ++ C E C S +C+ S CDG PDC + DE
Sbjct: 185 RGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 81/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C + C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSEDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPRTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 476 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 527
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 528 IDVNGGNRKTVLEDEKRLAHPFSL 551
>gi|162462017|ref|NP_001104808.1| lipophorin receptor isoform 1 precursor [Bombyx mori]
gi|84469396|dbj|BAE71406.1| lipophorin receptor [Bombyx mori]
Length = 908
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 154/374 (41%), Gaps = 83/374 (22%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C G +CV L+ CD PDCS+G DE CN C +F+CG GKCI
Sbjct: 133 CGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQMRWV 191
Query: 219 ----------------------PES-------------WKCDGFVDCLEDGSDEPNTCIH 243
P+S W CDG VDC DGSDE C+
Sbjct: 192 CDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCISAWWHCDGDVDCA-DGSDEVG-CVS 249
Query: 244 Q------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C + + +C C+ W+CD + DC D DE C G V C
Sbjct: 250 TPKVRSPCISTEFECNDRITCVHRAWVCDGDHDCP-----DGGDE---ALELC-RGNVTC 300
Query: 298 ALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
L + CIP C+ DC D +DE + +C E CG
Sbjct: 301 RLDQFQCKDHSCIPGALYCNGVKDCP-----DGSDE---YNCTRQKTICDKRTEFDCGGG 352
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN- 407
C+ LSK CD DC N EDE + +CE N CS +C TP G C C G
Sbjct: 353 -MCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKL 411
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
N+T C D DEC GSC Q C N ++ C C GY P + T + P S+
Sbjct: 412 IDNRT-CEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDR--TRCKATEGHP-SL 467
Query: 467 IFSSTVDIRRIHLN 480
+F+ DIR+I L+
Sbjct: 468 LFARKHDIRKISLD 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 144/380 (37%), Gaps = 95/380 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + +C ++ +C+ ++ C+G DC + DE E CT +F C G+CIP S
Sbjct: 50 CPMKQFQC-ANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCKTGRCIPLS 108
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDDIV 277
WKCD DC + ++P C + C + C +C+P W+CD+ DCS +D+
Sbjct: 109 WKCDNEKDCSDSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA 168
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCALSK------------KCIP 305
N D+F C NG +V+C +CI
Sbjct: 169 CNETCRSDEF-TCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCIS 227
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD ++DC+ D +DE C E C CV + CDG D
Sbjct: 228 AWWHCDGDVDCA-----DGSDEVGCVSTPKVRSPCISTEFECNDRITCVHRAWVCDGDHD 282
Query: 366 CSNGEDE--------------------------GPFCNNKADCENLKCSHKCSPTPR--- 396
C +G DE +CN DC + + C+
Sbjct: 283 CPDGGDEALELCRGNVTCRLDQFQCKDHSCIPGALYCNGVKDCPDGSDEYNCTRQKTICD 342
Query: 397 --------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
G MC CP ++ + +C + + +G C Q C +T + Y
Sbjct: 343 KRTEFDCGGGMCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYY 402
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C C +GY L D ++C ++
Sbjct: 403 CDCEKGYKL-IDNRTCEDID 421
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCI 259
N C QF C GKCIP +W C+G DC ++ + C C + + +C + +CI
Sbjct: 47 NGACPMKQFQCANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCK-TGRCI 105
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 316
P +W CD E DCS D++DED K C + C +C+P W+CD+ DC
Sbjct: 106 PLSWKCDNEKDCS-----DSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDC 160
Query: 317 S--TDDIVDNTDEDWDKYFSHNAV--------------------------LCHPNELRCG 348
S +D+ N D++ N C P
Sbjct: 161 SDGSDEKACNETCRSDEFTCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSC 220
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ CDG DC++G DE
Sbjct: 221 TDGQCISAWWHCDGDVDCADGSDE 244
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +RS +V+ +++WP+ L +D + +YW D+ +NT+ S DGS ++ H
Sbjct: 604 KIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTISSCNYDGSGRRLILH 663
Query: 167 PNEL 170
E+
Sbjct: 664 STEV 667
>gi|162462046|ref|NP_001104809.1| lipophorin receptor isoform 2 precursor [Bombyx mori]
gi|84469398|dbj|BAE71407.1| lipophorin receptor [Bombyx mori]
Length = 881
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 154/374 (41%), Gaps = 83/374 (22%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C G +CV L+ CD PDCS+G DE CN C +F+CG GKCI
Sbjct: 133 CGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQMRWV 191
Query: 219 ----------------------PES-------------WKCDGFVDCLEDGSDEPNTCIH 243
P+S W CDG VDC DGSDE C+
Sbjct: 192 CDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCISAWWHCDGDVDCA-DGSDEVG-CVS 249
Query: 244 Q------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C + + +C C+ W+CD + DC D DE C G V C
Sbjct: 250 TPKVRSPCISTEFECNDRITCVHRAWVCDGDHDCP-----DGGDE---ALELC-RGNVTC 300
Query: 298 ALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
L + CIP C+ DC D +DE + +C E CG
Sbjct: 301 RLDQFQCKDHSCIPGALYCNGVKDCP-----DGSDE---YNCTRQKTICDKRTEFDCGGG 352
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN- 407
C+ LSK CD DC N EDE + +CE N CS +C TP G C C G
Sbjct: 353 -MCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKL 411
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
N+T C D DEC GSC Q C N ++ C C GY P + T + P S+
Sbjct: 412 IDNRT-CEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDR--TRCKATEGHP-SL 467
Query: 467 IFSSTVDIRRIHLN 480
+F+ DIR+I L+
Sbjct: 468 LFARKHDIRKISLD 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 144/380 (37%), Gaps = 95/380 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + +C ++ +C+ ++ C+G DC + DE E CT +F C G+CIP S
Sbjct: 50 CPMKQFQC-ANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCKTGRCIPLS 108
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDDIV 277
WKCD DC + ++P C + C + C +C+P W+CD+ DCS +D+
Sbjct: 109 WKCDNEKDCSDSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDCSDGSDEKA 168
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCALSK------------KCIP 305
N D+F C NG +V+C +CI
Sbjct: 169 CNETCRSDEF-TCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCIS 227
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD ++DC+ D +DE C E C CV + CDG D
Sbjct: 228 AWWHCDGDVDCA-----DGSDEVGCVSTPKVRSPCISTEFECNDRITCVHRAWVCDGDHD 282
Query: 366 CSNGEDE--------------------------GPFCNNKADCENLKCSHKCSPTPR--- 396
C +G DE +CN DC + + C+
Sbjct: 283 CPDGGDEALELCRGNVTCRLDQFQCKDHSCIPGALYCNGVKDCPDGSDEYNCTRQKTICD 342
Query: 397 --------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
G MC CP ++ + +C + + +G C Q C +T + Y
Sbjct: 343 KRTEFDCGGGMCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYY 402
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C C +GY L D ++C ++
Sbjct: 403 CDCEKGYKL-IDNRTCEDID 421
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCI 259
N C QF C GKCIP +W C+G DC ++ + C C + + +C + +CI
Sbjct: 47 NGACPMKQFQCANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCK-TGRCI 105
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 316
P +W CD E DCS D++DED K C + C +C+P W+CD+ DC
Sbjct: 106 PLSWKCDNEKDCS-----DSSDEDPTVCKVEACGPEEFTCRGKPGECVPLTWMCDDNPDC 160
Query: 317 S--TDDIVDNTDEDWDKYFSHNAV--------------------------LCHPNELRCG 348
S +D+ N D++ N C P
Sbjct: 161 SDGSDEKACNETCRSDEFTCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSC 220
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ CDG DC++G DE
Sbjct: 221 TDGQCISAWWHCDGDVDCADGSDE 244
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +RS +V+ +++WP+ L +D + +YW D+ +NT+ S DGS ++ H
Sbjct: 604 KIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTISSCNYDGSGRRLILH 663
Query: 167 PNEL 170
E+
Sbjct: 664 STEV 667
>gi|405970919|gb|EKC35782.1| Low-density lipoprotein receptor-related protein 1B [Crassostrea
gigas]
Length = 2587
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 152/368 (41%), Gaps = 70/368 (19%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
+C + C+ + CD DC + DE C+ +C G C G CIP++W+CDG D
Sbjct: 2093 FKCKKGDSCIPMDWKCDFDNDCLDKSDELN-CDEKCEGGMTMCLDGTCIPQTWECDGHND 2151
Query: 230 CLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC---------------- 271
C+ + +TC H C + + C + +CIP WLCD + DC
Sbjct: 2152 CINGTDEALDTCNHNRTCKSTEFMCPSNFRCIPKVWLCDGDADCPKNEDEDVAQGCQSLG 2211
Query: 272 ---------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
S +D DN+DE D C G+ +C CI ++ LC
Sbjct: 2212 CNKDEYQCHNGLCIKSIFYCDSDNDCKDNSDEPPDCSRGCRPGEFKCTHHLNCINNSKLC 2271
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC D++DED +K S C + RCG + C+ S+ CDG DC +
Sbjct: 2272 DGFPDC-----YDHSDEDAEKCASKPPNNC---QFRCGDGS-CINESQVCDGHDDCGDNT 2322
Query: 371 DEGPFCN-----------NKADCEN----LKCSHKCSPTPRGAMCFCPAGQN--PNKTQC 413
DE CN KA N +C H C+ G C C G P+K C
Sbjct: 2323 DEASNCNVNECTLMELDKGKAIKNNGTYYKECQHDCTEKKIGYECVCNEGYELAPDKHSC 2382
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC C C NT SY C C +G+ L DGK+C V +I ++
Sbjct: 2383 TDVDECKTLYPCSHFCINTIGSYRCECAKGFHL-VDGKNC---QVTGSVKPYLILANGFY 2438
Query: 474 IRRIHLNG 481
+R I G
Sbjct: 2439 LRNISFLG 2446
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 148/325 (45%), Gaps = 37/325 (11%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT--PGQFSC-GMGKCIPESWKCD 225
+ +C S +C+ C+ DC +G DE C C+ + C KC+ S CD
Sbjct: 514 QFQCVRSGECIDREFQCNAVKDCEDGSDEDG-CEVYCSDMKTHYKCDSNSKCLLNSTICD 572
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 284
G DCL DG+DE N C G +C+ S +CIP W CD E DC D +DE
Sbjct: 573 GKPDCL-DGTDERNC--EDC-KGGFKCSESGECIPLRWKCDLEQDCE-----DGSDEYGC 623
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C + + QC CI +W CD+E DC D TDE Y + N PN
Sbjct: 624 QPARNCTSDEFQCD-GDSCILKSWRCDKEHDCK-----DGTDEANCTYSTCN----FPN- 672
Query: 345 LRCGSSN--QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA---- 398
+ CG + +C++ K CDG DCS+ DE C N CS C P P G
Sbjct: 673 ITCGPHDDVRCISPDKMCDGNDDCSDKSDENGCNPVNVSCRNHSCSDVCRPAPPGLVKQL 732
Query: 399 -MCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
+C C ++ ++ C + C G C QTC + C C EG+ L PDG +C
Sbjct: 733 YICLCNESRDLSRDNRTCQPTNICQSWGICQQTCEKLPQGHKCGCHEGFHLEPDGFTCRP 792
Query: 456 VNVPQDEPASIIFSSTVDIRRIHLN 480
++ EP +IFS+ ++R + L+
Sbjct: 793 LD---PEPEYLIFSNRHEMRSVDLS 814
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 121/306 (39%), Gaps = 64/306 (20%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+E+ G +R+ ++T Q P L + +D LYW D L+ V V S +
Sbjct: 1794 DRIERCDFDGNHRAVVMTSIPQHPFGLAL--YEDYLYWTDWLLHAVVRVNKYDSSDYTYL 1851
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGE----------------------------DE 197
N R Q + ++ F + DC+ +
Sbjct: 1852 EQNLNR-----QPMGIAVFAEDANDCTQNPCLNAGCTQQCHVVNKQAVCKCNDSFVLLPD 1906
Query: 198 GPFCNAE----CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQ 251
G C +E C+ +F C G KCIP C+ DC ED SDE + C H Q
Sbjct: 1907 GVRCASETVRNCSNLEFLCHDGSKCIPMVQTCNKINDC-EDKSDELDKVCNHTHCGTQFF 1965
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKFHQCFNGQVQCALSKKCIPH 306
+ +CIP CD + DC +D +DE D D QC N Q CI
Sbjct: 1966 TCANYQCIPWGKHCDRQRDC-----LDGSDERDCPCDKDSEFQCRNNQ--------CINK 2012
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
CD+E DC DD D + D + H + C +++ C+ S CDGKPDC
Sbjct: 2013 QHHCDQESDC--DDHSDEVGCNVDCSLIYRDDAYH--WVSCNTTSTCIMQSWICDGKPDC 2068
Query: 367 SNGEDE 372
+ DE
Sbjct: 2069 EDNIDE 2074
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCENLKCSHKCSP 393
V C+PN RC C+ LSKFCD K DC G DE CN C+ L C C+
Sbjct: 15 VSCNPNYERCPGEEVCIPLSKFCDKKKDCYLGGDEAS-CNVTFRTLPSCDTLNCEDNCTK 73
Query: 394 TPRGAMCFCPAGQ----NPNKTQCVDADEC-LIDGSCDQTCT--NTHLSYVCSCTEGYTL 446
T +G C+C + + + C+ + C +G CDQ C+ NT CSC GY
Sbjct: 74 TIKGPKCYCDSDKFTMVSEQNNTCIKYNPCDYHEGICDQKCSFNNTTNKVTCSCVSGYG- 132
Query: 447 RPDGKSC 453
DG C
Sbjct: 133 -SDGNQC 138
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 117/302 (38%), Gaps = 63/302 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+++A G + +V +I P+ L ID+ + LYW D+ L+ +E DG+H AV+
Sbjct: 1753 IQRAYFSGFSAQFIVKTDISTPNGLAIDHKEQFLYWIDARLDRIERCDFDGNHRAVVMTS 1812
Query: 166 ---HP-------------------------------NELRCGSSNQCVALSKFCDGKPDC 191
HP L + Q + ++ F + DC
Sbjct: 1813 IPQHPFGLALYEDYLYWTDWLLHAVVRVNKYDSSDYTYLEQNLNRQPMGIAVFAEDANDC 1872
Query: 192 SNGEDEGPFCNAECTPG-QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV 250
+ + P NA CT C KC+ L DG + + C N +
Sbjct: 1873 T----QNPCLNAGCTQQCHVVNKQAVC-----KCNDSFVLLPDGVRCASETVRNCSNLEF 1923
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
C KCIP C++ DC +D D D+ + H C CA + +CIP C
Sbjct: 1924 LCHDGSKCIPMVQTCNKINDC--EDKSDELDKVCNHTH-CGTQFFTCA-NYQCIPWGKHC 1979
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D + DC +D +DE + +E +C +NQC+ CD + DC +
Sbjct: 1980 DRQRDC-----LDGSDE-------RDCPCDKDSEFQC-RNNQCINKQHHCDQESDCDDHS 2026
Query: 371 DE 372
DE
Sbjct: 2027 DE 2028
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 12/83 (14%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLV-TKNI---QWPSSLVIDYNQDILYWCDSHLN 149
WD P R+E M GENR + + I WP+ L +DY+ + LYW D+ +
Sbjct: 934 WDTKNP-------RIETCSMAGENRHIIFHIRGIVEGGWPNGLTVDYDFERLYWIDARSD 986
Query: 150 TVESVRVDGS-HNAVLCHPNELR 171
++ ++ +G H VL +R
Sbjct: 987 SLHTITYEGQDHRLVLLDKENIR 1009
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
V C+PN RC C+ LSKFCD K DC G DE
Sbjct: 15 VSCNPNYERCPGEEVCIPLSKFCDKKKDCYLGGDEA 50
>gi|149022634|gb|EDL79528.1| low density lipoprotein receptor-related protein 4, isoform CRA_b
[Rattus norvegicus]
Length = 1414
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCVNAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD ++ D + + +A G + +V +++ P+ L ID+ + LYW D+ +
Sbjct: 780 WDSRDDHVYWTDVSTDTISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAGTDR 839
Query: 151 VESVRVDGSHNAVLCHPN 168
+E DGS VL N
Sbjct: 840 IEVANTDGSMRTVLIWEN 857
>gi|402893655|ref|XP_003910007.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Papio anubis]
Length = 1905
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|355752175|gb|EHH56295.1| hypothetical protein EGM_05672, partial [Macaca fascicularis]
Length = 1905
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|351695691|gb|EHA98609.1| Low-density lipoprotein receptor-related protein 2 [Heterocephalus
glaber]
Length = 2102
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 134/289 (46%), Gaps = 29/289 (10%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ--FSCGMGKCIPESWKCDGFVDCLE 232
++C+ ++ C+G+ +C +G DE C C + + C G CI W CDG DCL
Sbjct: 40 GDRCIPVAWLCNGERECPDGTDEQ--CEEPCGGHRQAWQCDDGTCISIHWLCDGAGDCL- 96
Query: 233 DGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
DGSDE N + C +VQC + +C+ LCD DC D +++ C
Sbjct: 97 DGSDEVNCERMTACPGQKVQCLGTSECLDAWELCDVHQDCK-----DGSNKAHCPQSHCL 151
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
GQ QC +K C+ +W CD C D++DE+ C +RC
Sbjct: 152 AGQWQCQ-NKVCVMESWKCDGINHCG-----DDSDEE-------ACAFCPEGTVRC-DEG 197
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPN 409
+C+ S CDG+ DC++G DE C E C CS T G C C +G P+
Sbjct: 198 KCIRESLMCDGEADCADGTDEPATCGRNCSLETGGCEGLCSDTAWGVRCSCGSGWQLQPD 257
Query: 410 KTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ C D DEC + G CDQ C NT SY C C +GY L G C ++
Sbjct: 258 RRSCADIDECSVAYGPCDQLCHNTPGSYSCDCVQGYELY-SGSKCRVID 305
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 108/223 (48%), Gaps = 21/223 (9%)
Query: 157 DGSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
DGS P E L C +CV S CDG DC + +DE + C+ +F C
Sbjct: 1112 DGSDEVTCWKPTEDCSLHCDKKTRCVPKSWLCDGNLDCFDKKDEEGCIHENCSMSEFRCK 1171
Query: 214 MGKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
G+CI S CDG DC +D SDE P +C GQV+C S +C+ W+CD ++D
Sbjct: 1172 SGQCISYSLHCDGHPDC-QDHSDEEGCPAAWPLRCPLGQVKCWGSGECVLSEWICDHDLD 1230
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D D D D + C Q CA +C+P W CD + DC D +DE
Sbjct: 1231 CK--DGSDEKDCDPEALW-CSPRQWACASRDQCVPDFWHCDGQRDCR-----DGSDE--- 1279
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
A C +E +CG+S C+ S C+GK DC++G DEG
Sbjct: 1280 --AGCPAQKCRRSEFQCGTS-ICLNFSLVCNGKEDCADGSDEG 1319
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 155/385 (40%), Gaps = 63/385 (16%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFKRILNGTHTLALEFNHRNQSLCFI 72
+ K IP D + ST I+ DW + + +G+H ++ N +N+ +
Sbjct: 934 IQKTTIPGK---DTQTLYSTGSIILQLLLDWPRRALYWVESGSHLQSMTLNGKNRHTIW- 989
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
R D + DL A I + ++ + N W L
Sbjct: 990 ----------RGTWTADTQMALDLNAASIL-WGSKGLGLQSLSLLKNRTYSLNKSWSDGL 1038
Query: 133 V---IDY-----NQDILYWCDSHLNTVESVRVDGSHNAVLCH-----PNELRCGSSNQCV 179
+ I Y ++ W L ++ V+ P +C ++C+
Sbjct: 1039 IAAHIPYLVTTDKAALVLWNRKTLEPFSVLKEPHIRKMVILAENQEVPGTFQCLDGSRCI 1098
Query: 180 ALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-----GKCIPESWKCDGFVDCLEDG 234
CDG DC +G DE C C + +C+P+SW CDG +DC +
Sbjct: 1099 DSKYHCDGAQDCPDGSDE-----VTCWKPTEDCSLHCDKKTRCVPKSWLCDGNLDCFDKK 1153
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-----WDKFH 288
+E CIH+ C + +C S +CI ++ CD DC D++DE+ W
Sbjct: 1154 DEE--GCIHENCSMSEFRCK-SGQCISYSLHCDGHPDCQ-----DHSDEEGCPAAWPL-- 1203
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C GQV+C S +C+ W+CD ++DC D +DE K A+ C P + C
Sbjct: 1204 RCPLGQVKCWGSGECVLSEWICDHDLDCK-----DGSDE---KDCDPEALWCSPRQWACA 1255
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEG 373
S +QCV CDG+ DC +G DE
Sbjct: 1256 SRDQCVPDFWHCDGQRDCRDGSDEA 1280
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+ C +VQC + +C+ LCD DC D +++ C GQ QC +K
Sbjct: 375 MTACPGQKVQCLGTSECLDAWELCDVHQDCK-----DGSNKAHCPQSHCLAGQWQCQ-NK 428
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
C+ +W CD C D++DE+ C +RC +C+ S CD
Sbjct: 429 VCVMESWKCDGINHCG-----DDSDEE-------ACAFCPEGTVRC-DEGKCIRESLMCD 475
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADEC 419
G+ DC++G DE C E C CS T G C C +G P++ C D DEC
Sbjct: 476 GEADCADGTDEPATCGRNCSLETGGCEGLCSDTAWGVRCSCGSGWQLQPDRRSCADIDEC 535
Query: 420 LID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ G CDQ C NT SY C C +GY L G C ++
Sbjct: 536 SVAYGPCDQLCHNTPGSYSCDCVQGYELY-SGSKCRVID 573
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 91/191 (47%), Gaps = 29/191 (15%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E+ LD+R G++ E P+ T+ PSS+ D + + +W D LN V V G
Sbjct: 317 ELGVLDQR---TGIY-EGLIPIKTR----PSSVAYDLERSMYFWVDKTLN----VFVSGK 364
Query: 160 HNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
N V +P + +C +++C+ + CD DC +G ++ + C GQ+
Sbjct: 365 PNPVPLYPERMTACPGQKVQCLGTSECLDAWELCDVHQDCKDGSNKAHCPQSHCLAGQWQ 424
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C C+ ESWKCDG C +D +E C C G V+C KCI + +CD E DC
Sbjct: 425 CQNKVCVMESWKCDGINHCGDDSDEE--ACAF-CPEGTVRCD-EGKCIRESLMCDGEADC 480
Query: 272 STDDIVDNTDE 282
+ D TDE
Sbjct: 481 A-----DGTDE 486
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++C +++C+ + CD DC +G ++ + C GQ+ C C+ ESWKC
Sbjct: 110 CPGQKVQCLGTSECLDAWELCDVHQDCKDGSNKAHCPQSHCLAGQWQCQNKVCVMESWKC 169
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DG C +D +E C C G V+C KCI + +CD E DC+ D TDE
Sbjct: 170 DGINHCGDDSDEE--ACAF-CPEGTVRCD-EGKCIRESLMCDGEADCA-----DGTDE 218
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 97/245 (39%), Gaps = 53/245 (21%)
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
Q A +CIP WLC+ E +C D TDE ++ QC CI +WLC
Sbjct: 36 QAACGDRCIPVAWLCNGERECP-----DGTDEQCEEPCGGHRQAWQCD-DGTCISIHWLC 89
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC +D +DE C +++C +++C+ + CD DC +G
Sbjct: 90 DGAGDC-----LDGSDE----VNCERMTACPGQKVQCLGTSECLDAWELCDVHQDCKDGS 140
Query: 371 DE----------GPF-CNNKA-DCENLKC---SHKCSPTPRGAMCFCPAGQNP------- 408
++ G + C NK E+ KC +H + A FCP G
Sbjct: 141 NKAHCPQSHCLAGQWQCQNKVCVMESWKCDGINHCGDDSDEEACAFCPEGTVRCDEGKCI 200
Query: 409 -------NKTQCVDADE---------CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
+ C D + L G C+ C++T CSC G+ L+PD +S
Sbjct: 201 RESLMCDGEADCADGTDEPATCGRNCSLETGGCEGLCSDTAWGVRCSCGSGWQLQPDRRS 260
Query: 453 CTAVN 457
C ++
Sbjct: 261 CADID 265
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A+ C P + C S +QCV CDG+ DC +G DE +C +F CG C+ S
Sbjct: 1244 ALWCSPRQWACASRDQCVPDFWHCDGQRDCRDGSDEAGCPAQKCRRSEFQCGTSICLNFS 1303
Query: 222 WKCDGFVDCLEDGSDEPNT 240
C+G DC DGSDE +
Sbjct: 1304 LVCNGKEDC-ADGSDEGGS 1321
>gi|440910163|gb|ELR59989.1| Low-density lipoprotein receptor, partial [Bos grunniens mutus]
Length = 807
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 162/380 (42%), Gaps = 82/380 (21%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
+V C + CG N+C++ S CDG+ DC NG DE C+ +F C GKCI
Sbjct: 42 KSVTCKMGDFSCGGRVNRCISGSWRCDGQVDCENGSDEEGCSPKTCSQDEFRCNDGKCIA 101
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD +DCL DGSDE + + C QC S CIP W C D D+
Sbjct: 102 PKFVCDLDLDCL-DGSDEASCPMPTCGPANFQCN-SSMCIPQLWA------CDGDPDCDD 153
Query: 280 TDEDWDKF-------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
++W K + C + C S +CI +W CD + DC D +D
Sbjct: 154 GSDEWPKHCGTPHPSGPLQDNNPCSALEFHCG-SGECIHSSWHCDHDPDCK-----DKSD 207
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP-- 374
E+ + C P+E +C S C+ S+ CD +PDC + D EGP
Sbjct: 208 EE-----NCAVATCRPDEFQC-SDGTCIHGSRQCDREPDCKDLSDELGCVNVTLCEGPNK 261
Query: 375 -------------FCNNKADC-----ENLK-------------CSHKCSPTPRGAMCFCP 403
CN+ DC E LK CSH C+ G C CP
Sbjct: 262 FKCQSGECISLDKVCNSVRDCRDWSDEPLKDCGTNECLDNKGGCSHICNDLKIGYECLCP 321
Query: 404 AG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G Q K +C D DEC +C Q C N SY C C EG+ L P K+C AV
Sbjct: 322 EGFQLVGKHRCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVGT---- 377
Query: 463 PASIIFSSTVDIRRIHLNGS 482
A + F++ ++R++ L+ S
Sbjct: 378 IAYLFFTNRHEVRKMTLDRS 397
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIPH 261
C +F C GKCI W CDG +C +DGSDE TC C G C +CI
Sbjct: 5 CGRNEFQCQNGKCISYKWVCDGTAEC-QDGSDESQETCKSVTCKMGDFSCGGRVNRCISG 63
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC + +DE+ C + +C KCI ++CD ++DC
Sbjct: 64 SWRCDGQVDCE-----NGSDEEGCSPKTCSQDEFRCN-DGKCIAPKFVCDLDLDC----- 112
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+D +DE S C P +C SS
Sbjct: 113 LDGSDE-----ASCPMPTCGPANFQCNSS 136
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA ++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S
Sbjct: 500 WGTPA--------EIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISS 551
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 552 IDVNGGNRKTVLEDKKKLAHPFSL 575
>gi|268560986|ref|XP_002646337.1| Hypothetical protein CBG12050 [Caenorhabditis briggsae]
Length = 4856
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/369 (31%), Positives = 161/369 (43%), Gaps = 67/369 (18%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPES 221
V C + RC S+ +C+ SK C+G DC NG DE ++ CTP +F CG G CI +S
Sbjct: 1010 VRCSVGQFRC-SNTKCIDKSKRCNGIQDCENGSDEEDCPRSKLCTPTEFRCGTGLCIKQS 1068
Query: 222 WKCDGFVDCLEDGSDEP-----NTCIH----QCFNGQVQCA-LSKKC--IPHNWLCDEEM 269
CDG + CL DG DE N+CI +C N Q C + +C +P C++E
Sbjct: 1069 QVCDGKMQCL-DGLDEKHCEENNSCIKGRQFRCANKQSTCLDMIFQCDGVPD---CEDES 1124
Query: 270 DCSTDDIVDNTDEDWDKFHQ--------------------CFNGQ--------------- 294
D S + NT K +Q C G+
Sbjct: 1125 DESPEFCKGNTSSSCAKMNQFMCADGKCLRSFQLCDGFPDCLTGEDEKECPPSMCNSATH 1184
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHNAVLCHPNELRCGSSN- 351
+ CA KC+ CD DD D +DE D + C P +C S
Sbjct: 1185 LSCANGNKCVSKELECD-----GVDDCGDKSDESHCDDIRMEAALLRCIPPMYKCQSGRF 1239
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK- 410
QC++ + CDGK DC +G+DEG +C+ + + CSH C TP G +C CP K
Sbjct: 1240 QCISDKQLCDGKNDCPSGDDEGMWCSFLCNSTEIGCSHTCRATPSGPICSCPDEYFLEKD 1299
Query: 411 -TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C D C G C Q C + + C C +GY L D SC V+ P+ E +I+S
Sbjct: 1300 GVTCAKKDPCRF-GQCSQHCMSQGSRHFCYCEDGYKLLNDRISCRTVD-PKTE--FMIYS 1355
Query: 470 STVDIRRIH 478
+ +IR I
Sbjct: 1356 NRHEIRMIQ 1364
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/239 (33%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-----EC 205
+ R DG C PN+ C + +C+A CDG+ DC +GEDEG F C
Sbjct: 3463 AQGFRSDGRSCVSECKPNDFVCTKTYKCIASWWRCDGQDDCGDGEDEGYFLKGVCPQFPC 3522
Query: 206 TPGQFSC------GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKC 258
PGQF C +C+ S CDG DCLE +E C H +C Q +C KKC
Sbjct: 3523 DPGQFLCPKSPRNTTAQCLYASKLCDGVKDCLEGEDEEKTFCEHFECTESQFKCGDKKKC 3582
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-----ALSKKCIPHNWLCDEE 313
IP +CD+E DC D +DE + C C + KCIP + CD E
Sbjct: 3583 IPLTSVCDKEKDCD-----DGSDERSCEIKSCKPDFFACVNETTSQISKCIPKEFYCDGE 3637
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC N ++ D F C + +C +S +C+ + CDG DC +G DE
Sbjct: 3638 DDCP------NGQDEPDTCFGIGE--CTHEQFQC-ASGKCIPKRRKCDGTIDCRDGSDE 3687
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 103/215 (47%), Gaps = 22/215 (10%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
KC P W CD DC DN+DE C + C + KC+P +LCD ++DC
Sbjct: 51 KCYPEQWFCDGYPDCR-----DNSDEPPTCKRACLENEFVCK-TGKCLPRGYLCDGQLDC 104
Query: 317 ST--DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D + D +DE + + + C NE C +S QCV L KFCDGK DCS+G DE
Sbjct: 105 GRFPDGLQDRSDES--RELCNQPLNCEHNEYACAASAQCVPLFKFCDGKLDCSDGSDE-- 160
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN-KTQCVDADEC--LIDG---SCDQT 428
C K C + + T G C+CP + N K +C ++C L +G +C Q
Sbjct: 161 VCRVKNISTANDCEYGAAITIDGIKCYCPKNKFLNEKGKCEFVNQCDRLKNGLPPACSQG 220
Query: 429 CT-NTHLSYVCSCTEGYTLRPDGKSCTA---VNVP 459
CT N + ++ C C + +G C A V++P
Sbjct: 221 CTDNKNGTFSCFCFDPRLTVANGTHCVAEKDVSIP 255
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 121/285 (42%), Gaps = 66/285 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPESW 222
C NE +C S++C+ CD DC +DE +C++ C PG F CG G CI ES
Sbjct: 2640 CAENEFKCLHSDKCIPYEDTCDQYNDCPMFDDEDAKYCSSRVCRPGYFDCGNGLCISESK 2699
Query: 223 KCDGFVDCL-----------------------------------EDGSDEPNTCIHQC-- 245
C+ F DC+ D SDE C
Sbjct: 2700 VCNRFNDCINFHDENNCTCSKSEFKCDSGNCIPGEDRCNHVQDCNDASDEIGCPYRNCSS 2759
Query: 246 -----FNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKF-----HQCFNG 293
+ + CA + +CI +W CD DC +D++ + D++K C +
Sbjct: 2760 LVEFGMSDLINCASTSQCIHPSWKCDGTNDCYDGSDELDCLVEFDFNKGSVSPPRSCDSA 2819
Query: 294 -QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C ++ C+P+ W CD + DC+ D +DE + C+ E C S+ +
Sbjct: 2820 TQFPCLATRNCMPNRWRCDGQPDCA-----DGSDEA-----NCEQKACNSFEFTCESTKK 2869
Query: 353 CVALSKFCDGKPDCSNGEDEGP---FCNNKADCENLKCS-HKCSP 393
C+ L + CDG+ DC NGEDE C++K +C+ H+C P
Sbjct: 2870 CIPLEQKCDGRSDCPNGEDENSCDTECDSKNGNSTFRCTNHRCIP 2914
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/313 (29%), Positives = 128/313 (40%), Gaps = 75/313 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC------GMGKCI 218
C ++ +CG +C+ L+ CD + DC +G DE C P F+C + KCI
Sbjct: 3569 CTESQFKCGDKKKCIPLTSVCDKEKDCDDGSDERSCEIKSCKPDFFACVNETTSQISKCI 3628
Query: 219 PESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
P+ + CDG DC +G DEP+TC I +C + Q QCA S KCIP CD +DC
Sbjct: 3629 PKEFYCDGEDDC-PNGQDEPDTCFGIGECTHEQFQCA-SGKCIPKRRKCDGTIDCR---- 3682
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---- 330
D +DE K +CA+ +C+P LCD + C+ TDE+ +
Sbjct: 3683 -DGSDEKGCK--------KECAIVCDNECVPVEELCDGKRKCT-----HGTDEEEEACAI 3728
Query: 331 KYFSHNAVLCHPNELRCGSSNQCV-----------------ALSKFCDGKPDCSNGEDE- 372
K VL +C C S CDGK DC +G+DE
Sbjct: 3729 KKLMEKPVLRTCGGFKCDGIIDCEDGADEKGCPDLECHLSNNASLICDGKVDCESGKDEQ 3788
Query: 373 -----GPF-----------------CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK 410
G + C+ + DC + + R A CF G +K
Sbjct: 3789 NCQNYGGYSNPLFQCSRQTVKEWQVCDGRWDCADGLDEYPEMCKSRQARCF-RIGFCDDK 3847
Query: 411 TQCVDADECLIDG 423
QC+D L DG
Sbjct: 3848 KQCLDVSTALCDG 3860
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 105/227 (46%), Gaps = 32/227 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQFSCGMGKCIPE 220
C+ E C S+ +C+ L + CDG+ DC NGEDE C+ EC F C +CIP
Sbjct: 2857 CNSFEFTCESTKKCIPLEQKCDGRSDCPNGEDENS-CDTECDSKNGNSTFRCTNHRCIPM 2915
Query: 221 SWKCDGFVDCLED----GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+W+CDG DCL++ GSDE + C G+ + +C + E+ D
Sbjct: 2916 AWRCDGTDDCLDNAKSLGSDEMD-----CAPGKTSFHVPSRCTDETCVVACELTAVLCDG 2970
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+ + ++ +D+ C + QC L S +CI LCD +DC +D +DE W
Sbjct: 2971 IKDCNDGFDE-ENCASLDRQCKLNEWMCDSGQCINSAHLCDSSVDC-----IDGSDE-WV 3023
Query: 331 KY--FSHNAVLCHPNELRCGSSN---QCVALSKFCDGKPDCSNGEDE 372
+ S PN C N C+ + CDG+ DC +G DE
Sbjct: 3024 EICSLSEPPKRGCPNGWSCVLKNGTIGCLQEHQLCDGRKDCMSGIDE 3070
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 28/220 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIP 219
C N+ +C S+ C+ L CDGK DC++G DE + C+ GQF C KCI
Sbjct: 968 CVGNKFQCDSTT-CIPLEFLCDGKSDCNDGTDELETMCKTVPDVRCSVGQFRCSNTKCID 1026
Query: 220 ESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+S +C+G DC E+GSDE P + + C + +C + CI + +CD +M C
Sbjct: 1027 KSKRCNGIQDC-ENGSDEEDCPRSKL--CTPTEFRCG-TGLCIKQSQVCDGKMQC----- 1077
Query: 277 VDNTDEDW-DKFHQCFNG-QVQCALSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+D DE ++ + C G Q +CA + C+ + CD DC D +DE +
Sbjct: 1078 LDGLDEKHCEENNSCIKGRQFRCANKQSTCLDMIFQCDGVPDCE-----DESDESPEFCK 1132
Query: 334 SHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C N+ C + +C+ + CDG PDC GEDE
Sbjct: 1133 GNTSSSCAKMNQFMC-ADGKCLRSFQLCDGFPDCLTGEDE 1171
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 9/108 (8%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC--- 230
S +C FCDG PDC + DE P C C +F C GKC+P + CDG +DC
Sbjct: 48 SGPKCYPEQWFCDGYPDCRDNSDEPPTCKRACLENEFVCKTGKCLPRGYLCDGQLDCGRF 107
Query: 231 ---LEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
L+D SDE +Q C + + CA S +C+P CD ++DCS
Sbjct: 108 PDGLQDRSDESRELCNQPLNCEHNEYACAASAQCVPLFKFCDGKLDCS 155
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 105/428 (24%), Positives = 160/428 (37%), Gaps = 77/428 (17%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N ++ + A+ SW +E++ + G R LV+KN W + L +D
Sbjct: 715 NPRAIAVHVAKSYLFWGSWSEDRQNDATTPAMIERSKLDGSERKTLVSKNSMWINGLTLD 774
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC-------HPNELRCGSSNQCVALSKFCDGK 188
D LYWCD++ N +E +R +G+ V+ HP L ++ + ++F G
Sbjct: 775 LKNDFLYWCDAYRNVIERIRWNGADREVIIQGVDKISHPYGLAFFDNH--IFFTEFKRGA 832
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248
N F + Q+S + + + S + C H CF
Sbjct: 833 VKRVNVN----FPDQVQEIFQYSATVFELAVFK---NSLSKSTSPCSTSSSNCEHFCF-- 883
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDN----TDEDWDKFHQC-FNGQVQCALSKKC 303
C S C P C + M +VDN DE W+ + C + + C S+KC
Sbjct: 884 ATSCKGSVGCEPVKCGCADGM-----KLVDNGKCVKDEHWEDPNGCDEDREFTCLNSRKC 938
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP LCD + DC D+ D C N+ +C S+ C+ L CDGK
Sbjct: 939 IPKANLCDGDDDCGDGSDEDSNGICKD-------FKCVGNKFQCDSTT-CIPLEFLCDGK 990
Query: 364 PDCSNGEDE---------------GPF-------------CNNKADCENLKCSHKCSPTP 395
DC++G DE G F CN DCEN C P
Sbjct: 991 SDCNDGTDELETMCKTVPDVRCSVGQFRCSNTKCIDKSKRCNGIQDCENGSDEEDC---P 1047
Query: 396 RGAMCF-----CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
R +C C G ++Q D +DG ++ C + SC +G R
Sbjct: 1048 RSKLCTPTEFRCGTGLCIKQSQVCDGKMQCLDGLDEKHCEENN-----SCIKGRQFRCAN 1102
Query: 451 KSCTAVNV 458
K T +++
Sbjct: 1103 KQSTCLDM 1110
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 118/298 (39%), Gaps = 53/298 (17%)
Query: 95 DLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D PA ++ D + + G R ++ +++ +L + +D +YW D H +T+
Sbjct: 3337 DAPAQRLYFGDAHRDYIASCNYDGTKRRMVLRNSVRHIFALAV--FEDYIYWSDWHNHTI 3394
Query: 152 ESV-RVDGSHNAVLCHPNELR------CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
E V ++ G + VL + R S Q + K K CS + C+
Sbjct: 3395 ERVHKITGDNRKVLIQDKQYRPMGFKVVHPSFQNMGSMK--TAKHPCS----QPARCDNL 3448
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C P PE++ C C + + +C+ +C C + KCI W
Sbjct: 3449 CIPAS--------SPEAFTCM----CAQGFRSDGRSCVSECKPNDFVCTKTYKCIASWWR 3496
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFN-----GQVQCALSKK-----CIPHNWLCDEEM 314
CD + DC D DE + C GQ C S + C+ + LCD
Sbjct: 3497 CDGQDDCG-----DGEDEGYFLKGVCPQFPCDPGQFLCPKSPRNTTAQCLYASKLCDGVK 3551
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC ED +K F + C ++ +CG +C+ L+ CD + DC +G DE
Sbjct: 3552 DCL-------EGEDEEKTFCEH-FECTESQFKCGDKKKCIPLTSVCDKEKDCDDGSDE 3601
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 172 CGSSNQCVALS-KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
C QC+ +S CDG DCS+G DE P + G F C G+C+ ES +CDG DC
Sbjct: 3844 CDDKKQCLDVSTALCDGFKDCSDGSDESPAHCKDMCKGMFRCTNGRCLDESARCDGRDDC 3903
Query: 231 LEDGSDEPNTCIHQC 245
DGSDE +TC QC
Sbjct: 3904 -GDGSDE-DTCGLQC 3916
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 100/234 (42%), Gaps = 61/234 (26%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE-------SWKCDGFV 228
N+CV + + CDGK C++G DE + +C + K + + +KCDG +
Sbjct: 3700 NECVPVEELCDGKRKCTHGTDEE----------EEACAIKKLMEKPVLRTCGGFKCDGII 3749
Query: 229 DCLEDGSDE---PNTCIHQCFN------GQVQCAL--------------------SKKCI 259
DC EDG+DE P+ H N G+V C S++ +
Sbjct: 3750 DC-EDGADEKGCPDLECHLSNNASLICDGKVDCESGKDEQNCQNYGGYSNPLFQCSRQTV 3808
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI-PHNWLCDEEMDCST 318
+CD DC+ D + + + + +CF C K+C+ LCD DCS
Sbjct: 3809 KEWQVCDGRWDCA-DGLDEYPEMCKSRQARCFRIGF-CDDKKQCLDVSTALCDGFKDCS- 3865
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE +H +C RC ++ +C+ S CDG+ DC +G DE
Sbjct: 3866 ----DGSDESP----AHCKDMCK-GMFRC-TNGRCLDESARCDGRDDCGDGSDE 3909
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 104/299 (34%), Gaps = 52/299 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+A G R ++ +++ L ID + LY+ DS + +DG + V+
Sbjct: 2469 IERAYFSGYKREQILQEDLHDLRGLAIDLETEKLYFSDSKDFRISRCDLDGCNREVVISN 2528
Query: 166 ------HPNELRCGSS---------NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
HP EL + ++K + N E P +
Sbjct: 2529 SDNPSIHPFELEIYENEIIFTDWVKRAVSGINKISGVEHRLMNRATEVPVGLVVVDVSKE 2588
Query: 211 SCGMGKCIPESWKCDGFVDCLEDG------------SDEPNTCI-----HQCFNGQVQCA 253
C C KC + + DG S + TC +C + +C
Sbjct: 2589 FCTKNPCYENELKCGDYCRLMADGQATCACNGERRLSADNKTCTGDVDEKKCAENEFKCL 2648
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
S KCIP+ CD+ DC + D+ D + C G C + CI + +C+
Sbjct: 2649 HSDKCIPYEDTCDQYNDCP---MFDDEDAKYCSSRVCRPGYFDCG-NGLCISESKVCNRF 2704
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC + N C +E +C S N C+ C+ DC++ DE
Sbjct: 2705 NDCIN-------------FHDENNCTCSKSEFKCDSGN-CIPGEDRCNHVQDCNDASDE 2749
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGP-FCN---AECTPGQFSCGMGKCIPESWK-CDGFVD 229
S Q V + CDG+ DC++G DE P C A C F +C+ S CDGF D
Sbjct: 3804 SRQTVKEWQVCDGRWDCADGLDEYPEMCKSRQARCFRIGFCDDKKQCLDVSTALCDGFKD 3863
Query: 230 CLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C DGSDE P C C G +C + +C+ + CD DC D +DED
Sbjct: 3864 C-SDGSDESPAHCKDMC-KGMFRCT-NGRCLDESARCDGRDDCG-----DGSDED 3910
>gi|262073126|ref|NP_001160002.1| low-density lipoprotein receptor precursor [Bos taurus]
gi|296485885|tpg|DAA28000.1| TPA: low-density lipoprotein receptor [Bos taurus]
Length = 845
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/380 (31%), Positives = 162/380 (42%), Gaps = 82/380 (21%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
+V C + CG N+C++ S CDG+ DC NG DE C+ +F C GKCI
Sbjct: 64 KSVTCKMGDFSCGGRVNRCISGSWRCDGQVDCENGSDEEGCSPKTCSQDEFRCNDGKCIA 123
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD +DCL DGSDE + + C QC S CIP W C D D+
Sbjct: 124 PKFVCDLDLDCL-DGSDEASCPMPTCGPANFQCN-SSMCIPQLWA------CDGDPDCDD 175
Query: 280 TDEDWDKF-------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
++W K + C + C S +CI +W CD + DC D +D
Sbjct: 176 GSDEWPKHCGTPHPSGPLQDNNPCSALEFHCG-SGECIHSSWHCDHDPDCK-----DKSD 229
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP-- 374
E+ + C P+E +C S C+ S+ CD +PDC + D EGP
Sbjct: 230 EE-----NCAVATCRPDEFQC-SDGTCIHGSRQCDREPDCKDLSDELGCVNVTLCEGPNK 283
Query: 375 -------------FCNNKADC-----ENLK-------------CSHKCSPTPRGAMCFCP 403
CN+ DC E LK CSH C+ G C CP
Sbjct: 284 FKCQSGECISLDKVCNSVRDCRDWSDEPLKDCGTNECLDNKGGCSHICNDLKIGYECLCP 343
Query: 404 AG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G Q K +C D DEC +C Q C N SY C C EG+ L P K+C AV
Sbjct: 344 EGFQLVGKHRCEDIDECQNPDTCSQLCVNLEGSYKCECEEGFRLEPLTKACKAVGT---- 399
Query: 463 PASIIFSSTVDIRRIHLNGS 482
A + F++ ++R++ L+ S
Sbjct: 400 IAYLFFTNRHEVRKMTLDRS 419
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 18/143 (12%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ + GT ++A + ++L Q++ + ++ +
Sbjct: 479 DGLAVDWIHSNIYWTDSILGTVSVADTKGVKRKTL--FQEEGSKPRAIVVDPVHGFMYWT 536
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
D AP ++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+
Sbjct: 537 DWGAPA------EIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSI 590
Query: 155 RVDGSHNAV-------LCHPNEL 170
V+G + L HP L
Sbjct: 591 DVNGGNRKTVLEDKKKLAHPFSL 613
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIPH 261
C +F C GKCI W CDG +C +DGSDE TC C G C +CI
Sbjct: 27 CGRNEFQCQDGKCISYKWVCDGTAEC-QDGSDESQETCKSVTCKMGDFSCGGRVNRCISG 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC + +DE+ C + +C KCI ++CD ++DC
Sbjct: 86 SWRCDGQVDCE-----NGSDEEGCSPKTCSQDEFRCN-DGKCIAPKFVCDLDLDC----- 134
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
+D +DE S C P +C SS
Sbjct: 135 LDGSDE-----ASCPMPTCGPANFQCNSS 158
>gi|45383976|ref|NP_990517.1| low-density lipoprotein receptor-related protein 8 precursor
[Gallus gallus]
gi|47117286|sp|Q98931.1|LRP8_CHICK RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
AltName: Full=Protein LR8B; Flags: Precursor
gi|1595750|emb|CAA65729.1| LR8B [Gallus gallus]
Length = 917
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+D + A C P+E +C S+ C++++ CDG +C +G DE C+P +F C
Sbjct: 140 IDEAGCAPACSPDEFQC-SNKTCISINFVCDGYNNCGDGSDEKKCSPLTCSPNEFQCNNS 198
Query: 216 KCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
CIP+ W CD DC ED SDE + C + QC + +CI NW CD +
Sbjct: 199 VCIPQLWVCDNQADC-EDHSDESIERCGYDAKAFNTCAAHEFQCG-NGECILLNWKCDGD 256
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + QC CI CD+ DC DN+DE
Sbjct: 257 EDCK-----DKSDEQDCPLVTCRPDEFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE- 304
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENL 385
+ P++ +C S +C+ K CD DC + DE P N+ N
Sbjct: 305 --AGCVQESACESPSKFQC-KSGECIDGGKVCDLHRDCRDWSDE-PLKECGINECSLNNG 360
Query: 386 KCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C G C CP G +K C D DEC +C Q C N Y C C EGY
Sbjct: 361 GCSHICKDLKIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGY 420
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C AV + +IF++ ++R+I L
Sbjct: 421 EMDTLSKNCKAVG----KSPYLIFTNRHEVRKIDL 451
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 148/375 (39%), Gaps = 92/375 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C + +C+ CD DCS+ DE C F+C G CIP+ WKC
Sbjct: 29 CDKDQFQC-RNERCIPAVWACDEDNDCSDNSDEADCPKKTCAETDFACDNGHCIPDRWKC 87
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
DG +C DGSDE C Q C ++ C LS KCIP +W CD + DC +
Sbjct: 88 DGEEEC-SDGSDESEAACTKQVCPAEKISCGDLSNKCIPSSWRCDGQKDCESGIDEAGCA 146
Query: 274 -------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
++ D +DE C + QC S CIP W
Sbjct: 147 PACSPDEFQCSNKTCISINFVCDGYNNCGDGSDEKKCSPLTCSPNEFQCNNS-VCIPQLW 205
Query: 309 LCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC D++DE ++ Y + C +E +CG+ +C+ L+ CDG DC
Sbjct: 206 VCDNQADCE-----DHSDESIERCGYDAKAFNTCAAHEFQCGNG-ECILLNWKCDGDEDC 259
Query: 367 SNGEDEG--PFCNNKAD---CENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE P + D C + C H C A C + ++P+K
Sbjct: 260 KDKSDEQDCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSDEAGCVQESACESPSKF 319
Query: 412 QCVDAD-----------------------ECLI------DGSCDQTCTNTHLSYVCSCTE 442
QC + EC I +G C C + + Y C C
Sbjct: 320 QCKSGECIDGGKVCDLHRDCRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPP 379
Query: 443 GYTLRPDGKSCTAVN 457
GY L D K+C ++
Sbjct: 380 GYKLL-DKKTCGDID 393
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
G EC QF C +CIP W CD DC D SDE + C C +
Sbjct: 22 GKGAMKECDKDQFQCRNERCIPAVWACDEDNDC-SDNSDEADCPKKTCAETDFACD-NGH 79
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC 316
CIP W CD E +CS D D ++ K C ++ C LS KCIP +W CD + DC
Sbjct: 80 CIPDRWKCDGEEECS--DGSDESEAACTK-QVCPAEKISCGDLSNKCIPSSWRCDGQKDC 136
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE + A C P+E +C S+ C++++ CDG +C +G DE
Sbjct: 137 ES-----GIDE------AGCAPACSPDEFQC-SNKTCISINFVCDGYNNCGDGSDE 180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN +A+++ H+N + +S ++ + NS DL P +D
Sbjct: 510 LNSPEGVAIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNS-DLSEPRAIAVDPTRRFM 568
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV+ NI+WP+ + +D LYW DS L+++ + +
Sbjct: 569 YWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 628
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 629 GSNREVL 635
>gi|73983330|ref|XP_540748.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Canis lupus familiaris]
Length = 2021
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 264 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 318
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 319 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 373
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 374 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 423
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 424 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 482
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 483 QKCQMVRGAVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 542
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 543 RPDRRSCKALG---PEPV-LLFANRIDIRQV 569
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 160 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 218
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 219 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 271
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 272 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 296
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 999 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1056
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R I
Sbjct: 1523 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1582
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1583 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLD 1639
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G VL HP L
Sbjct: 1640 YDTRRIYWVDAHLDRIESADLNGKLRQVLLSHVSHPFAL 1678
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G L
Sbjct: 1305 NAKLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGGSRHTL 1364
Query: 165 CHP 167
P
Sbjct: 1365 VSP 1367
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 606 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 665
Query: 166 HPN 168
N
Sbjct: 666 WQN 668
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 694 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 751
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 913 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 972
Query: 168 N 168
N
Sbjct: 973 N 973
>gi|444707589|gb|ELW48854.1| Low-density lipoprotein receptor-related protein 4 [Tupaia
chinensis]
Length = 1970
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 214 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 268
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 269 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 323
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 324 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 373
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 374 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 432
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 433 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 492
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 493 RPDRRSCKALG---PEPV-LLFANRIDIRQV 519
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 110 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 168
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 169 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 221
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 222 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 246
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 949 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1006
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R +
Sbjct: 1473 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLV 1532
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1533 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERAHLDGSERKVLINTDLGWPNGLTLD 1589
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G L HP L
Sbjct: 1590 YDTRRIYWVDAHLDRIESADLNGKLRQGLVSHVSHPFAL 1628
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1255 NAKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTL 1314
Query: 165 CHP 167
P
Sbjct: 1315 VSP 1317
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 644 RIEASSMDGSARRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 701
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E ++G+H VL
Sbjct: 556 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLNGAHRKVLL 615
Query: 166 HPN 168
N
Sbjct: 616 WQN 618
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 863 ISRAKWDGTGQEVVVGTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 922
Query: 168 N 168
N
Sbjct: 923 N 923
>gi|383409185|gb|AFH27806.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
Length = 1905
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|297688812|ref|XP_002821884.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Pongo abelii]
Length = 1986
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 260 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 314
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 315 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 369
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +CI +W CD E DC+ DN+DE+ +
Sbjct: 370 --DQSDERNCTTSMCTVEQFRCR-SGRCIRLSWRCDGEDDCA-----DNSDEE--NCENT 419
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 420 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 478
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 479 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 538
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 539 RPDRRSCKALG---PEPV-LLFANRIDIRQV 565
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 156 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 214
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 215 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 267
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 268 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 292
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R I
Sbjct: 1488 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1547
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1548 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLD 1604
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G VL HP L
Sbjct: 1605 YDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFAL 1643
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 964 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1021
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1270 NAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTL 1329
Query: 165 CHP 167
P
Sbjct: 1330 VSP 1332
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 659 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 716
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 878 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 937
Query: 168 N 168
N
Sbjct: 938 N 938
>gi|242015486|ref|XP_002428384.1| Very low-density lipoprotein receptor precursor, putative
[Pediculus humanus corporis]
gi|212512996|gb|EEB15646.1| Very low-density lipoprotein receptor precursor, putative
[Pediculus humanus corporis]
Length = 835
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 115/361 (31%), Positives = 148/361 (40%), Gaps = 56/361 (15%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C P E C S +CV L+ CD PDCS+G DE CN C +F+C GKCI E W
Sbjct: 30 VCTPEEFSCRSMPGECVPLTWMCDDNPDCSDGSDEKT-CNETCRSDEFTCSNGKCIQERW 88
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DGSDE N C K CI W CD + DC + E
Sbjct: 89 -VCDRDDDCGDGSDEKNCPATTCAPVTDFACSEKYCITARWRCDGDFDCPDGSDEKDCPE 147
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK---------YF 333
+ +C + +C CI +W+CD + DC D +DED + F
Sbjct: 148 TANPTSRCTAREFECLDRISCIHQSWVCDGDKDCP-----DGSDEDISRCKNTTCRADQF 202
Query: 334 SHNAVLCHPNELRCGSSNQ-----------------------------CVALSKFCDGKP 364
C P L C + + C++L K CD K
Sbjct: 203 QCKDKTCIPGHLVCSGTIECSDKSDEENCDIPISKCDLKTQFDCGGGICISLEKVCDKKL 262
Query: 365 DCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL 420
DC EDE K +C +N CS C TP C C G NKT C D DEC
Sbjct: 263 DCPKWEDEPKDSCGKNECLIDNGGCSQLCVDTPGSYYCHCHEGFKLIDNKT-CTDIDECE 321
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTVDIRRIHL 479
I G+C Q C N + C C +GY P + C AV + AS++F+ DIR+I L
Sbjct: 322 IPGTCSQICINEIGGFKCQCVQGYLRDPRNYTKCKAV----EGHASLLFARKHDIRKISL 377
Query: 480 N 480
+
Sbjct: 378 D 378
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 125/325 (38%), Gaps = 92/325 (28%)
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQC-ALSKKCIPHNWLCDEEMDCS-- 272
CIP +W+CDG DC + ++P C + C + C ++ +C+P W+CD+ DCS
Sbjct: 2 CIPLTWQCDGQKDCSDGADEDPKVCQSKVCTPEEFSCRSMPGECVPLTWMCDDNPDCSDG 61
Query: 273 TDDIVDNTDEDWDKFHQCFNGQ-------------------------VQCA-------LS 300
+D+ N D+F C NG+ CA
Sbjct: 62 SDEKTCNETCRSDEF-TCSNGKCIQERWVCDRDDDCGDGSDEKNCPATTCAPVTDFACSE 120
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
K CI W CD + DC D +DE ++ C E C C+ S C
Sbjct: 121 KYCITARWRCDGDFDCP-----DGSDEKDCPETANPTSRCTAREFECLDRISCIHQSWVC 175
Query: 361 DGKPDCSNGEDE------------------------------GPF-CNNKADCEN----- 384
DG DC +G DE G C++K+D EN
Sbjct: 176 DGDKDCPDGSDEDISRCKNTTCRADQFQCKDKTCIPGHLVCSGTIECSDKSDEENCDIPI 235
Query: 385 LKCSHKCSPTPRGAMCF-----------CPAGQNPNKTQCVDADECLID-GSCDQTCTNT 432
KC K G +C CP ++ K C +ECLID G C Q C +T
Sbjct: 236 SKCDLKTQFDCGGGICISLEKVCDKKLDCPKWEDEPKDSC-GKNECLIDNGGCSQLCVDT 294
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVN 457
SY C C EG+ L D K+CT ++
Sbjct: 295 PGSYYCHCHEGFKLI-DNKTCTDID 318
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM G +R +V+ ++WP+ L +D +YW D+ +NT+ S DG++ ++
Sbjct: 501 KIERAGMDGSHRQVIVSYEMKWPNGLTLDLVLKKIYWADAKMNTISSCNFDGTNRRII 558
>gi|297268006|ref|XP_001111133.2| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Macaca mulatta]
Length = 2043
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 286 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 340
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 341 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 395
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 396 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 445
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 446 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 504
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 505 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYEL 564
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 565 RPDRRSCKALG---PEPV-LLFANRIDIRQV 591
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 182 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 240
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 241 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 293
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 294 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 318
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1558 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1614
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1615 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1674
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1675 DRIESADLNGKLRQVLVSHVSHPFAL 1700
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 1021 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1078
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1329 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1388
Query: 167 P 167
P
Sbjct: 1389 P 1389
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 628 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 687
Query: 166 HPN 168
N
Sbjct: 688 WQN 690
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 716 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 773
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1547 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1603
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 935 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 994
Query: 168 N 168
N
Sbjct: 995 N 995
>gi|380812746|gb|AFE78247.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
gi|383409187|gb|AFH27807.1| low-density lipoprotein receptor-related protein 4 precursor
[Macaca mulatta]
Length = 1905
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECADEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|354469954|ref|XP_003497377.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Cricetulus griseus]
Length = 2009
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 252 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 306
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 307 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 361
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 362 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 411
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADCE--NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + +C N C+
Sbjct: 412 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCA 470
Query: 389 HKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 471 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 530
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 531 RPDRRSCKALG---PEPV-LLFANRIDIRQV 557
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 148 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 206
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 207 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 259
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 260 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 284
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 987 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSRRKVL 1044
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1531 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1587
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1588 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDIRRIYWVDAHLDRIESAD 1647
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1648 LNGKLRQVLVSHVSHPFAL 1666
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1293 NAKLERSGMDGSDRTVLINHNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTL 1352
Query: 165 CHP 167
P
Sbjct: 1353 VSP 1355
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 594 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 653
Query: 166 HPN 168
N
Sbjct: 654 WQN 656
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 682 RIEASSMDGSARRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 739
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G + ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1513 IRRADLNGSSMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1569
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 901 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 960
Query: 168 N 168
N
Sbjct: 961 N 961
>gi|291384940|ref|XP_002708908.1| PREDICTED: low density lipoprotein receptor-related protein 4
[Oryctolagus cuniculus]
Length = 1918
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 161 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 215
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 216 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCLNMGWRCDGDADCD--- 270
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +CI +W CD E+DC+ DN+DE+ +
Sbjct: 271 --DQSDERNCTTSVCTAEQFRCR-SGRCIRLSWRCDGEVDCA-----DNSDEE--NCENT 320
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCE-----NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P C + E N C+
Sbjct: 321 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQSCRPRTGEESCTVNNGGCA 379
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 380 QKCQMVRGTVQCTCHTGYRLMEDGRTCHDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 439
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 440 RPDRRSCKALG---PEPV-LLFANRIDIRQV 466
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 57 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 115
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 116 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 168
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 169 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 193
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 896 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 953
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1433 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1489
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1490 AVFPRKGYLFWTDWGHIAKIERAHLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1549
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1550 DRIESADLNGKLRQVLVSHVSHPFAL 1575
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1204 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLVS 1263
Query: 167 P 167
P
Sbjct: 1264 P 1264
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 503 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 562
Query: 166 HPN 168
N
Sbjct: 563 WQN 565
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 591 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 648
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1422 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1478
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 810 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 869
Query: 168 N 168
N
Sbjct: 870 N 870
>gi|344283309|ref|XP_003413414.1| PREDICTED: low-density lipoprotein receptor [Loxodonta africana]
Length = 901
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 155/380 (40%), Gaps = 80/380 (21%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEG--------------------- 198
+V C + CG N+C+ CDG+ DC NG DE
Sbjct: 64 KSVTCQSGDFSCGGRVNRCIPQFWRCDGQVDCENGSDEQYCAPKTCSQDQFRCHDGKCIS 123
Query: 199 --------------------PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE- 237
P C P F C CIPE W CDG DC EDGSDE
Sbjct: 124 QVFVCDSDQDCLDGSDEDACPVTMTTCGPANFQCNTSTCIPELWACDGDPDC-EDGSDEW 182
Query: 238 ------PNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
NT Q NG + C S +CI +W CD DC D +DE+
Sbjct: 183 LQHCEGRNTSAPQRDNGPCSSFEFHCR-SGECIHTSWRCDAAPDCK-----DKSDEEDCA 236
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNEL 345
C Q QC CI + CD+E DC D +DE N LC PN+
Sbjct: 237 VATCRPDQFQCG-DGTCIHGSRQCDKEYDCK-----DLSDE----VGCINVTLCEGPNKF 286
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCP 403
+C S +C+ L K C+ DC + DE +C + K CSH C+ G C CP
Sbjct: 287 KC-HSGECITLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSHVCNDLKIGYECLCP 345
Query: 404 AG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
G + ++ +C D DEC SC Q C N Y C C +G+ + P K+C AV
Sbjct: 346 EGFRLVDQRRCEDIDECQDPDSCSQICVNLEGGYKCECHKGFQIDPHTKACKAVGT---- 401
Query: 463 PASIIFSSTVDIRRIHLNGS 482
A + F++ ++R++ L+ S
Sbjct: 402 IAYLFFTNRHEVRKMTLDRS 421
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 100/216 (46%), Gaps = 18/216 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C E +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CGRKEFQC-RDGKCISYKWVCDGSAECQDGSDESQETCKSVTCQSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE C Q +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-ENGSDEQYCAPKTCSQDQFRCH-DGKCISQVFVCDSDQDC-----LDGS 138
Query: 281 DEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHN 336
DED C QC S CIP W CD + DC +D+ + + + +
Sbjct: 139 DEDACPVTMTTCGPANFQCNTS-TCIPELWACDGDPDCEDGSDEWLQHCEGRNTSAPQRD 197
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E C S +C+ S CD PDC + DE
Sbjct: 198 NGPCSSFEFHC-RSGECIHTSWRCDAAPDCKDKSDE 232
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 81/172 (47%), Gaps = 19/172 (11%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC C +G C +CIP
Sbjct: 26 KCGRKEFQCRDGKCISYKWVCDGSAEC-QDGSDESQETCKSVTCQSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE + C Q +C KCI ++CD + DC
Sbjct: 85 QFWRCDGQVDCE-----NGSDEQYCAPKTCSQDQFRCH-DGKCISQVFVCDSDQDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+D +DED C P +C +S C+ CDG PDC +G DE
Sbjct: 135 -LDGSDED---ACPVTMTTCGPANFQCNTST-CIPELWACDGDPDCEDGSDE 181
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A + ++L + ++ + A W PA
Sbjct: 493 YWTDSVLGTVSVADTRGVKRKTLFKEKDSKPRAIVVDPAHGFMYWTDWGTPA-------- 544
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
+++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+GS+
Sbjct: 545 KIKKGGLNGVDIYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGSNRKTVLE 604
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 605 DKNRLAHPFSL 615
>gi|426368168|ref|XP_004051083.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Gorilla gorilla gorilla]
Length = 1956
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 199 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 253
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 254 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 308
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 309 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 358
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 359 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 417
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 418 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 477
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 478 RPDRRSCKALG---PEPV-LLFANRIDIRQV 504
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 95 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 153
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 154 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 206
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 207 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 231
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 934 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 991
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1478 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1534
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1535 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1594
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1595 LNGKLRQVLVSHVSHPFAL 1613
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1242 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1301
Query: 167 P 167
P
Sbjct: 1302 P 1302
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 541 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 600
Query: 166 HPN 168
N
Sbjct: 601 WQN 603
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 629 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 686
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1460 IRRADLNGSNMETVIGQGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1516
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 848 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 907
Query: 168 N 168
N
Sbjct: 908 N 908
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 56/151 (37%), Gaps = 30/151 (19%)
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
G+ + + + G D G+ P NK N CSH C P P G C CP G
Sbjct: 1332 GTGSNVILVRSNLPGLMDIQAGDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQ 1391
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP--DGKSCTAVNVPQDEPAS 465
DG +TC + +Y+ + G R D T V+VP E +
Sbjct: 1392 LKG-----------DG---KTCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNN 1437
Query: 466 IIF--SSTVD------------IRRIHLNGS 482
+I +VD IRR LNGS
Sbjct: 1438 VISLDYDSVDGKVYYTDVFLDVIRRADLNGS 1468
>gi|395816213|ref|XP_003781601.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Otolemur garnettii]
Length = 2050
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 293 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 347
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 348 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 402
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 403 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 452
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADCE--NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + +C N C+
Sbjct: 453 GSPQCASDQFLCWN-GRCIGQRKLCNGANDCGDNSDESPQQNCRPRTGEENCSVNNGGCA 511
Query: 389 HKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 512 QKCQMVRGTVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 571
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 572 RPDRRSCKALG---PEPV-LLFANRIDIRQV 598
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 189 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 247
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 248 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 300
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 301 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R I
Sbjct: 1552 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1611
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1612 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLD 1668
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G VL HP L
Sbjct: 1669 YDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFAL 1707
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 1028 KIERAGMDASDRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1085
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1334 NAKLERSGMDGSERTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTL 1393
Query: 165 CHP 167
P
Sbjct: 1394 VSP 1396
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 635 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 694
Query: 166 HPN 168
N
Sbjct: 695 WQN 697
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 723 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 780
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 942 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 1001
Query: 168 N 168
N
Sbjct: 1002 N 1002
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+ +A + G ++T +Q L +D +YW D+ N +E +DGS VL
Sbjct: 1249 RISRANLDGSQHEDIITTGLQTTDGLAVDAIGHKVYWTDTGTNRIEVGNLDGSMRKVLVW 1308
Query: 167 PN 168
N
Sbjct: 1309 QN 1310
>gi|47116978|sp|Q9QYP1.2|LRP4_RAT RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=Multiple epidermal growth
factor-like domains 7; Flags: Precursor
Length = 1905
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCVNAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|281346318|gb|EFB21902.1| hypothetical protein PANDA_004061 [Ailuropoda melanoleuca]
Length = 2333
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/401 (30%), Positives = 169/401 (42%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 378 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWICDG 437
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 438 QKDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 492
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 493 -ATCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 550
Query: 340 CHPNE----------------LRCG-----------SSNQCVALSKF-CDGKPDCSNGED 371
C P + L+CG + +C+ S++ CDG DC + D
Sbjct: 551 CIPKQFVCDHDDDCGDGSDESLQCGYRQCKAEEFSCADGRCLLNSQWQCDGDFDCPDHSD 610
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P C+NK DC +
Sbjct: 611 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 670
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 671 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 729
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 730 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 767
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 186/504 (36%), Gaps = 134/504 (26%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL 69
QC +K CI W+CDE+ DC+ D D + D + G H EF RN
Sbjct: 1175 FQCKTTKHCISKLWVCDEDPDCA--DASDEANCD------KKTCGPH----EFQCRNN-- 1220
Query: 70 CFIQQQNVSSVRLRCAQINDLLNSWDLP--APEIFPLDERLEKAGMHGENRSPLVTKNIQ 127
N RC ND ++ D P+ L + L G +R
Sbjct: 1221 ------NCIPDHWRCDSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSR--------- 1265
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDG 187
+WCD + + D + C + +C S+ QC++ CDG
Sbjct: 1266 --------------FWCDGDFDCADGS--DERNCETSCSKGQFQC-SNGQCISAKWKCDG 1308
Query: 188 KPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
DC GEDE + C+ ++ C CI S KC+G DC DGSDE + C+ +C
Sbjct: 1309 HEDCKYGEDEKHCEPASPTCSSSEYICASRGCISASLKCNGEYDC-ADGSDEMD-CVTEC 1366
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------ 299
Q +C CIP WLCD DC VD +DE+ C G C
Sbjct: 1367 KEDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEE-----NCDRGGNMCRADEFLCN 1416
Query: 300 SKKCIPHNWLCDEEMDCS--------------------------------------TDDI 321
+ C H W+CD E DC DD
Sbjct: 1417 NSLCKLHFWVCDGEDDCGDNSDEAPDMCAKFLCPPTRPYRCRNNRICLQPEQMCNGIDDC 1476
Query: 322 VDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----- 375
DN+DED ++ A C +E C S+ +C+ + CD DC +G DE
Sbjct: 1477 GDNSDEDHCGGKLTYKARPCKKDEFAC-SNKKCIPMDLQCDQFDDCGDGSDEQGCRITSA 1535
Query: 376 ----------CNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDG 423
C + A C +K S C C G +N QC D +ECL+ G
Sbjct: 1536 EYTCEDNVNPCGDDAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFG 1586
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLR 447
+C C N SY C C + + R
Sbjct: 1587 TCSHQCINIEGSYKCVCDQNFQER 1610
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 1051 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 1109
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 1110 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 1163
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 1164 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 1213
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 1214 EFQC-RNNNCIPDHWRCDSQNDCSDNSDE 1241
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 99/208 (47%), Gaps = 18/208 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 1170 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCRNNNCIPDHWRC 1229
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 1230 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDER- 1281
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C GQ QC+ + +CI W CD DC ED +K+ + C +E
Sbjct: 1282 NCETSCSKGQFQCS-NGQCISAKWKCDGHEDCK-------YGED-EKHCEPASPTCSSSE 1332
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +S C++ S C+G+ DC++G DE
Sbjct: 1333 YIC-ASRGCISASLKCNGEYDCADGSDE 1359
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 1091 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 1149
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 1150 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 1203
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 1204 NCDKKTCGPHEFQCR-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTLK 1252
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 1253 DFLCANGD-CVSSRFWCDGDFDCADGSDE 1280
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ SK CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 297 RCIPHSKLCDGENDCGDNSDELDCKVSTCAAVEFRCADGTCIPRSARCNQNIDC-ADASD 355
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E + C H G ++C + C+ +W+CD DC D D
Sbjct: 356 EKSCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 413
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 414 HKCEENYFGCP-SGRCILNTWICDGQKDCE-----DGLDE------FHCDSSCSWNQFAC 461
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE----NLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE A C + + SH C P
Sbjct: 462 -SAQKCISKHWICDGEDDCGDGLDESDSICGAATCAADMFSCQGSHACVPRHWLCDGERD 520
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 521 CPNGSDELSTAGCAPNNT 538
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 102/234 (43%), Gaps = 39/234 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH+ LCD E
Sbjct: 249 EFECGNGECIDYQLTCDGAPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHSKLCDGE 308
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 327
DC DN+DE K C + +CA CIP + C++ +DC+ D +DE
Sbjct: 309 NDCG-----DNSDELDCKVSTCAAVEFRCA-DGTCIPRSARCNQNIDCA-----DASDEK 357
Query: 328 ---DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ D + + +RC S++ CV S CDG DC + DE
Sbjct: 358 SCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPSWICDGSNDCGDYSDE------------ 405
Query: 385 LKC----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
LKC HKC G CP+G+ T D + DG CD +C+
Sbjct: 406 LKCPVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 455
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + +
Sbjct: 1786 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVISVSS 1845
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 1846 KQGLLHPHRI 1855
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 122/340 (35%), Gaps = 64/340 (18%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER-------- 107
+ LA+++ +N +++ + +L +L S L P LD R
Sbjct: 824 NALAVDWIGKNLYWSDTEKRIIEVSKLN-GLYPTILVSKRLKFPRDLSLDPRAGYLYWID 882
Query: 108 ------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH
Sbjct: 883 CCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNQRLYWADE--NHIEFSNMDGSHR 940
Query: 162 AVLCHPNELRCGSSNQCVALSKF------CDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ PN+ G +AL+ F DGK A T G +
Sbjct: 941 HKV--PNQDIPGV----IALTLFEDYIYWTDGKTK--------SLSRAHKTSGADRLSL- 985
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCS 272
SW + + +P+ H C C+ L H C +
Sbjct: 986 ---INSWHAITDIQ-VYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLA 1041
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D+ C Q +C + KCIP W CD + DD D +DE D
Sbjct: 1042 ADNRT--------CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDDC- 1086
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P +CG+ C + CDG+ DC + DE
Sbjct: 1087 ---PEFKCQPGRFQCGTG-LCALPAFICDGENDCGDNSDE 1122
>gi|397488443|ref|XP_003815275.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Pan paniscus]
Length = 1973
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 216 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 270
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 271 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 325
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 326 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 375
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 376 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 434
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 435 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 494
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 495 RPDRRSCKALG---PEPV-LLFANRIDIRQV 521
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 104/260 (40%), Gaps = 47/260 (18%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL-------VIDYNQD--------- 139
LPA + P D L + G NR +L V+ Y D
Sbjct: 9 LPATNLMPTDGMLCSYSLRGGNRDFCYHSAKGGGGALKKQTELKVLPYQYDFSFARSPRT 68
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF-----------CDGK 188
+LY S L S+R L E CG S+ A+S CDG
Sbjct: 69 LLYLLYSALTDSFSLRPG------LASSPECACGRSHFTCAVSALGECTCIPAQWQCDGD 122
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248
DC + DE C+P F C GKCI SW CDG DC ED SDE + +C
Sbjct: 123 NDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDEQDCPPRECEED 181
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+ C + CI W CD + DC DN+DE D +C + + +C+ CI +W
Sbjct: 182 EFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRCS-DGSCIAEHW 233
Query: 309 LCDEEMDCSTDDIVDNTDED 328
CD + DC D +DE+
Sbjct: 234 YCDGDTDCK-----DGSDEE 248
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1488 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1544
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1545 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1604
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1605 DRIESADLNGKLRQVLVSHVSHPFAL 1630
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 951 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1008
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1259 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1318
Query: 167 P 167
P
Sbjct: 1319 P 1319
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 558 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 617
Query: 166 HPN 168
N
Sbjct: 618 WQN 620
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 646 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 703
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1477 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1533
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 865 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 924
Query: 168 N 168
N
Sbjct: 925 N 925
>gi|281340480|gb|EFB16064.1| hypothetical protein PANDA_010586 [Ailuropoda melanoleuca]
Length = 1888
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 131 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 185
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 186 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 240
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 241 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 290
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 291 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 349
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 350 QKCQMVRGVVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 409
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 410 RPDRRSCKALG---PEPV-LLFANRIDIRQV 436
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 27 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 85
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 86 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 138
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 139 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 163
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1403 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1459
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1460 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1519
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G L HP L
Sbjct: 1520 DRIESADLNGKLRQALVSHVSHPFAL 1545
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 866 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFACLDGSKRKVL 923
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G+ L
Sbjct: 1174 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLVS 1233
Query: 167 P 167
P
Sbjct: 1234 P 1234
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 473 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 532
Query: 166 HPN 168
N
Sbjct: 533 WQN 535
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 561 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 618
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1392 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1448
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 780 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 839
Query: 168 N 168
N
Sbjct: 840 N 840
>gi|291242827|ref|XP_002741307.1| PREDICTED: low density lipoprotein-related protein 1
(alpha-2-macroglobulin receptor)-like [Saccoglossus
kowalevskii]
Length = 1350
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 20/242 (8%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C + Q CA + +CIP W CD + DC D +DE C Q CA + CI
Sbjct: 28 CTSEQFTCA-NGQCIPKIWKCDGDADCR-----DGSDEISCPPITCSPRQFSCASTNLCI 81
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P W CD E DC DN+DE+ D+ + C N +C + +C+ +++ CD
Sbjct: 82 PSGWRCDGEDDCG-----DNSDEELDECPTPAPFTCPANYFQCLGTERCILVTQLCDNIV 136
Query: 365 DC-SNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECL- 420
C +G DEG C ++ C N C C P G +CFC G P+ CVD +EC+
Sbjct: 137 QCPQDGSDEGAHCRDENVCANAGCEKHCRIGPLGPVCFCDNGYKAGPDGKSCVDVNECVE 196
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
I G C+Q C N +Y CSC GY L G+ C ++ +E ++ +++++I + LN
Sbjct: 197 IVGVCEQMCINNIGNYECSCAPGYQLV--GQDC---DIVVEEEPKLVIANSINIMTLLLN 251
Query: 481 GS 482
G+
Sbjct: 252 GT 253
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 75/158 (47%), Gaps = 21/158 (13%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKCSPTPR 396
C P + CG C+ + CDG DC NG DE +C EN + CSH C +P
Sbjct: 506 CKPPKWSCGIPPICLEPHQLCDGIADCENGTDEA-YCEQNECDENHQSNDCSHICYNSPD 564
Query: 397 GAMCFCPAGQ--NPNKTQCVDADE--CLIDGSCDQTCTNTHLS---YVCSCTEGYTLRPD 449
G C CP G + C+ +DE C + G C Q C T + Y C C +GY L PD
Sbjct: 565 GYRCGCPIGMVLTEDNKNCMFSDEDFCSMKGRCSQICVKTKGNRGPYYCDCYQGYQLEPD 624
Query: 450 GKSCTAVN--VPQDEPASIIFSSTVDIRRI---HLNGS 482
SC + + VP +IFS+ ++R + H +GS
Sbjct: 625 NWSCRSTDPGVPY-----LIFSNRYELRFLDIRHTSGS 657
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 8/116 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + C ++ QC+ CDG DC +G DE C+P QFSC CIP W+
Sbjct: 28 CTSEQFTC-ANGQCIPKIWKCDGDADCRDGSDEISCPPITCSPRQFSCASTNLCIPSGWR 86
Query: 224 CDGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CDG DC D SDE P C QC +++CI LCD + C D
Sbjct: 87 CDGEDDC-GDNSDEELDECPTPAPFTCPANYFQCLGTERCILVTQLCDNIVQCPQD 141
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 73/182 (40%), Gaps = 42/182 (23%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------H 160
++ + M G + LVT + +P + +DY+Q +YW D++L+ +E + +G+
Sbjct: 381 KVVRMNMDGTGVTALVTTKVVFPHGVTLDYDQKKVYWVDAYLDYIECMTYEGNERRTVVQ 440
Query: 161 NAVLCHPNELRCGSS---------NQCVALSKFCDGKPDCSNGEDEGPFCNA-------- 203
+ H + S N V ++K+ +G +
Sbjct: 441 GQTVAHLYGITIFESSLYVTNWHDNSIVKVNKYNGHSEVIKDGMSRAGALHVYHQYRQPR 500
Query: 204 ----ECTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEP-------------NTCIHQC 245
+C P ++SCG+ C+ CDG DC E+G+DE N C H C
Sbjct: 501 TSKDDCKPPKWSCGIPPICLEPHQLCDGIADC-ENGTDEAYCEQNECDENHQSNDCSHIC 559
Query: 246 FN 247
+N
Sbjct: 560 YN 561
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 12/88 (13%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSC-G 213
+ C P + C S+N C+ CDG+ DC + DE PF C F C G
Sbjct: 65 ITCSPRQFSCASTNLCIPSGWRCDGEDDCGDNSDEELDECPTPAPFT---CPANYFQCLG 121
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTC 241
+CI + CD V C +DGSDE C
Sbjct: 122 TERCILVTQLCDNIVQCPQDGSDEGAHC 149
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 23/115 (20%)
Query: 107 RLEKAGMHGENRSPLVTKNIQ-----WPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-- 159
R+E+A M GENR ++ N+ WP+ L ID+ + + W D+ N++ S DGS
Sbjct: 784 RIERASMAGENR--IIVMNVTDLQGGWPNGLTIDFLERRIIWIDARSNSIHSSFYDGSDV 841
Query: 160 HNAV-----LCHPNELRC---------GSSNQCVALSKFCDGKPDCSNGEDEGPF 200
H + L HP + SN V +K+ G + + PF
Sbjct: 842 HTILKGHEHLSHPFAVSLFEGFVFWTDWKSNIVVKANKWTGGNVTVVHNTNSQPF 896
>gi|213625398|gb|AAI70523.1| Ldlr2-a protein [Xenopus laevis]
gi|213626297|gb|AAI70522.1| Ldlr2-a protein [Xenopus laevis]
Length = 892
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/363 (30%), Positives = 153/363 (42%), Gaps = 52/363 (14%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
AV C ++ CG N+C+ L CDG+ DC NG DE C QF+C GKCI
Sbjct: 64 RAVTCGADQFSCGGRLNRCIPLFWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCIS 123
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD DC +DGSDE C QC CIP W CD + DC D
Sbjct: 124 LDFVCDEDQDC-DDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDCE-----DG 177
Query: 280 TDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCS----TDDIVDNT---- 325
+DE+ + + CA S +CI +W CD DC D V T
Sbjct: 178 SDEEHCEGREPIKTDKPCAPLEFHCGSGECIHMSWKCDGGYDCKDKSDEKDCVKPTCRPD 237
Query: 326 ----------------DEDWD-KYFSH-----NAVLCH-PNELRCGSSNQCVALSKFCDG 362
D ++D K S N C P+ +C S +C+ + K CD
Sbjct: 238 QFQCNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKC-RSGECITMDKVCDK 296
Query: 363 KPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADEC 419
K DC + DE + +C N CSH C+ G C C G ++ +C D +EC
Sbjct: 297 KRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQKRCEDLNEC 356
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N Y C C EGY + P SC ++ A + F++ ++R++ L
Sbjct: 357 ENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGT----VAYLFFTNRHEVRKMTL 412
Query: 480 NGS 482
+ S
Sbjct: 413 DRS 415
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 140/343 (40%), Gaps = 65/343 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPGQFSCG--MGKCIPE 220
C NE +CG +C+ CDG +C +G DE C A C QFSCG + +CIP
Sbjct: 27 CDRNEFQCGDG-KCIPYKWICDGSAECKDGSDESSETCRAVTCGADQFSCGGRLNRCIPL 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCDG DC E+GSDE + C + Q C S KCI +++CDE+ DC D +
Sbjct: 86 FWKCDGQTDC-ENGSDENDCTRKVCADDQFTCR-SGKCISLDFVCDEDQDCD-----DGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHNAV 338
DE + C QC CIP W CD + DC D +DE+ +
Sbjct: 139 DESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDCE-----DGSDEEHCEGREPIKTDK 193
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPF 375
C P E CGS +C+ +S CDG DC + DE
Sbjct: 194 PCAPLEFHCGSG-ECIHMSWKCDGGYDCKDKSDEKDCVKPTCRPDQFQCNDGTCIHGSRQ 252
Query: 376 CNNKADCENLKCSHKCSPTP----------RGAMCFCPAGQNPNKTQCVD---------- 415
C+ + DC++L C R C K C D
Sbjct: 253 CDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKVCDKKRDCRDWTDEPIKECG 312
Query: 416 ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ECL +G C C + + Y C C EGY L D K C +N
Sbjct: 313 ENECLRNNGGCSHICNDLKIGYECLCNEGYRL-VDQKRCEDLN 354
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 91/194 (46%), Gaps = 24/194 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TC-IHQCFNGQVQCALS-KKCI 259
+C +F CG GKCIP W CDG +C +DGSDE + TC C Q C +CI
Sbjct: 25 GKCDRNEFQCGDGKCIPYKWICDGSAEC-KDGSDESSETCRAVTCGADQFSCGGRLNRCI 83
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD + DC + +DE+ C + Q C S KCI +++CDE+ DC
Sbjct: 84 PLFWKCDGQTDCE-----NGSDENDCTRKVCADDQFTCR-SGKCISLDFVCDEDQDCD-- 135
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
D +DE + A C+P +C C+ CDG DC +G DE C +
Sbjct: 136 ---DGSDESY-----CPAPTCNPAMFQCKDKGICIPKLWACDGDRDCEDGSDE-EHCEGR 186
Query: 380 ADCENLKCSHKCSP 393
E +K C+P
Sbjct: 187 ---EPIKTDKPCAP 197
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ + G + +
Sbjct: 586 IDITGENRRTV 596
>gi|47228669|emb|CAG07401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2378
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 151/548 (27%), Positives = 217/548 (39%), Gaps = 127/548 (23%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-------------WDKYFKRI 51
C G +C ++ +CI H + CD TDD D++DE +F +
Sbjct: 301 CKKGYRRC-INGRCIGHQFWCD-----GTDDCGDHSDELPCNTLLVLISQGLLPNWFAFL 354
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKA 111
L T EF ++ S C V + C +D +N F L
Sbjct: 355 LLVTLCKPGEFQCKDGS-CISNFSRCDQV-VNCEDASDEMNCQSTDCSRFFRL------- 405
Query: 112 GMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELR 171
G+ G + + + SS V D N D + D N + ++ N C
Sbjct: 406 GVKGASFQSCERTTLCYLSSWVCDGNNDCGDFSDEK-NCPDKRKLKCPVNFFAC------ 458
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
S +C+ +S CD + DC NG DE C+ CT QF C +CI W CDG DC
Sbjct: 459 --PSGRCIPMSWTCDKENDCENGADE-THCDKFCTSTQFECANHRCISSHWVCDGSDDC- 514
Query: 232 EDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
DGSDE C + C QC S C+P W CD + DC D DE C
Sbjct: 515 GDGSDEDQKCKSKTCSPEAFQCPGSHMCVPQRWKCDGDKDCP-----DGADESVKA--GC 567
Query: 291 FNGQVQC-------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C +++CIP +++CD ++DCS D +DE + + C P+
Sbjct: 568 MYTNSTCDPENEFMCQNRQCIPKHFVCDLDVDCS-----DGSDESPECEYP----TCGPD 618
Query: 344 ELRCGSSNQCVALSKF-CDGKPDCSNGEDEGP----------FCNNKA------------ 380
E RC ++ +C+ K+ CDG+ DC + DE P CN+ A
Sbjct: 619 EFRC-ANGRCLNQKKWECDGEFDCHDHSDEAPKNPRCTSSERTCNDSAFTCLNGNCLNET 677
Query: 381 ---------------------DCENLK---CSHKCSPTPRGAMCFCPAGQNPNK--TQCV 414
+C N K CS C G C C G + CV
Sbjct: 678 LLCDRNDDCGDGSDELNCFINECLNSKLSGCSQLCDDLKIGYKCRCHPGFQLKRDGKTCV 737
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
D DECL C Q C NTH S+ C C +G+ P++EP +IF++ +
Sbjct: 738 DVDECLTTYPCSQRCINTHGSFHCLCVDGFQ-------------PKEEPY-LIFANRYYL 783
Query: 475 RRIHLNGS 482
R+++L+GS
Sbjct: 784 RKLNLDGS 791
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 116/228 (50%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 1184 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPTQFQCAITKRCIPRVW 1243
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 1244 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 1300
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ + C Q +C + +C+P W CD + DC DN+DED C
Sbjct: 1301 EECAE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----KCMPRQCS 1348
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C+ K D ++ +C++
Sbjct: 1349 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDEHG-CDLKCDTDHFQCNN 1394
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 154/441 (34%), Gaps = 135/441 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 873 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALAVDVRYRYL 931
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ + GM G NRS +V + I WP+ L +D+
Sbjct: 932 YWSDWGDNPHIGRIGMDGSNRSVIVEEKITWPNGLTLDFINDRIYWADAREDYIEFASLD 991
Query: 137 --------NQDI------------LYWCDSHLNTVESV-RVDGSHNA------------- 162
N DI +YW D ++ + G++
Sbjct: 992 GTNRHTVLNHDIPHIFAMTLFEEYIYWTDWETKSINRAHKTQGTNKTTLISTLHRPMDVH 1051
Query: 163 ---------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
VL HP + G + LS K C + C + CT QF
Sbjct: 1052 IYHPYRQPEVLNHPCQTNNGGCSNLCLLSPGGGYKCACPTNFYLASDQRTCMSNCTASQF 1111
Query: 211 SCGMGKCIPESWKCDGFVDC---------------------------------------L 231
C KCIP WKCD DC
Sbjct: 1112 VCKNDKCIPFWWKCDTEDDCGDRSDEPADCPEFKCRPGQFQCGTGICTNPAYICDGDNDC 1171
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
+D SDE N IH C Q +C+ +CIP + C+ + +C D DE C
Sbjct: 1172 QDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCG-----DGEDEKDCPEVTCA 1226
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 1227 PTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSG 1277
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 1278 RCIPARWKCDGEDDCGDASDE 1298
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 130/489 (26%), Positives = 193/489 (39%), Gaps = 83/489 (16%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q QCA++K+CIP W+CD + DC VD +DE + ++ G EF
Sbjct: 1225 CAPTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEPAN--CTQMTCGVD----EFRC 1273
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
++ C R +C +D ++ D P E + E +N
Sbjct: 1274 KDSGRCI-------PARWKCDGEDDCGDASDEPKEEC--AERTCEPYQFRCKN------- 1317
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
N P DY+ D C + + + + S + C ++ +C+A
Sbjct: 1318 NRCVPGRWQCDYDND----CGDNSDEDKCMPRQCSESEFAC--------TNGRCIAGRWK 1365
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN---TC 241
CDG DC++G DE C+ +C F C G CIP W+CD DCL DGSDE N
Sbjct: 1366 CDGDHDCADGSDEHG-CDLKCDTDHFQCNNGHCIPIRWRCDADPDCL-DGSDEENCGSAT 1423
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
C + QC + C P W CD E DC D D E KF +C +
Sbjct: 1424 ERHCPADEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPEQCRKFQCPPTRAFRCQNDR 1480
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--AVL-------------------C 340
C+ + CD +C + N W S+ A L C
Sbjct: 1481 VCLQVSKRCDGVNNCGDNSDELNCRTCWTPSCSYEICAFLDCKRNICCASTETPPAVPTC 1540
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC----------NNKADCENLKCSHK 390
+E C ++++C++ + C+ DC + + C +N+ C + +H
Sbjct: 1541 EKDEFLC-ANHRCISSTLRCNLFNDCEDFGSDEIGCKTDTKLNDCRSNRTHCGDGDEAH- 1598
Query: 391 CSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C + C C P Q C D +ECL G C +C NT SY CSC + +T D
Sbjct: 1599 CVTNGTDSFCSCKPGFQKIGHRTCGDKNECLQFGVCSHSCNNTKGSYKCSCHKYFTRISD 1658
Query: 450 GKSCTAVNV 458
+C A N+
Sbjct: 1659 --TCKADNI 1665
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 158/429 (36%), Gaps = 115/429 (26%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+W+ AP I +A ++G N ++ +I+ P+ L ID+ + LY+ D+ L+
Sbjct: 97 FWTNWNEQAPSIM-------RASLNGANVLVIIGSDIKTPNGLAIDHRAEKLYFSDATLD 149
Query: 150 TVESVRVDGSHNAVL-----CHPNELRC-------------------------------- 172
+E DGS VL HP L
Sbjct: 150 KIERCEYDGSSRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLRADNSQWASSLWANDT 209
Query: 173 -------------GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP--------GQFS 211
G + C+ S DG+ +CS D + C+P F
Sbjct: 210 NNCEFSPCRTNNGGCQDLCLPTS---DGRVNCSCRGDRHLLEDNTCSPLNMSCGSVDGFE 266
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMD 270
CG G CI S CDG C + ++ + C ++ C G +C ++ +CI H + CD
Sbjct: 267 CGNGDCINYSLTCDGMAHCKDKSDEKQSYCANRICKKGYRRC-INGRCIGHQFWCD---- 321
Query: 271 CSTDDIVDNTDE----------------DWDKF----HQCFNGQVQCALSKKCIPHNWLC 310
TDD D++DE +W F C G+ QC CI + C
Sbjct: 322 -GTDDCGDHSDELPCNTLLVLISQGLLPNWFAFLLLVTLCKPGEFQCK-DGSCISNFSRC 379
Query: 311 DEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
D+ ++C D ++ D ++F + C + C S CDG DC +
Sbjct: 380 DQVVNCEDASDEMNCQSTDCSRFFRLGVK--GASFQSCERTTLCYLSSWVCDGNNDCGDF 437
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADEC---LIDGSC 425
DE N D LKC P A CP+G+ P C ++C + C
Sbjct: 438 SDE----KNCPDKRKLKC-----PVNFFA---CPSGRCIPMSWTCDKENDCENGADETHC 485
Query: 426 DQTCTNTHL 434
D+ CT+T
Sbjct: 486 DKFCTSTQF 494
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SVR+DGS +
Sbjct: 1830 KIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERLYWADAKLSVIGSVRLDGSDPVI 1886
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + M+G N L ++ P L +D+ LYWCD +T+E +++G++ VL
Sbjct: 855 IRRMHMNGSNMEVLHRTSLSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVL 911
>gi|194217880|ref|XP_001490948.2| PREDICTED: low-density lipoprotein receptor-related protein 4
[Equus caballus]
Length = 1995
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 238 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 292
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 293 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 347
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 348 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 397
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 398 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEESCNVNNGGCA 456
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 457 QKCQMVRGTVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 516
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 517 RPDRRSCKALG---PEPV-LLFANRIDIRQV 543
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 82/187 (43%), Gaps = 18/187 (9%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFC 201
SHL + + S C N C S C+ CDG DC + DE
Sbjct: 98 SHLAERQRHKGLASSPQCACGRNHFTCAVSALGECTCIPAQWQCDGDNDCGDHSDEDGCM 157
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
C+P F C GKCI SW CDG DC ED SDE + +C + C + CI
Sbjct: 158 LPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDEQDCPPRECEEDEFPCQ-NGYCIRS 215
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD + DC DN+DE D +C + + +C+ CI +W CD + DC
Sbjct: 216 LWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRCS-DGSCIAEHWYCDGDTDCK---- 264
Query: 322 VDNTDED 328
D +DE+
Sbjct: 265 -DGSDEE 270
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 973 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1030
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1510 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1566
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1567 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1626
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1627 DRIESADLNGKLRQVLVSHVSHPFAL 1652
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G R+ L++ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1281 KLERSGMDGSERTVLISNNLGWPNGLTVDKAGSQLLWADAHTERIEAADLNGANRHTLVS 1340
Query: 167 P 167
P
Sbjct: 1341 P 1341
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 580 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 639
Query: 166 HPN 168
N
Sbjct: 640 WQN 642
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 668 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 725
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1499 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1555
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 887 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 946
Query: 168 N 168
N
Sbjct: 947 N 947
>gi|443735073|gb|ELU18928.1| hypothetical protein CAPTEDRAFT_62161, partial [Capitella teleta]
Length = 826
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/334 (32%), Positives = 143/334 (42%), Gaps = 32/334 (9%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C ++ RC S +C+ CD DC + DE C P F C G+C+P
Sbjct: 92 NITSCDADQFRCKSDGKCITNRWVCDYDADCDDKSDELDCPARTCPPENFMCNNGRCVPG 151
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
WKCDG DC DG DE N + C + + CA CI W CD + DC
Sbjct: 152 IWKCDGDRDCT-DGEDEENCQLATSDPSSPCSSREFTCADKMSCIHIAWRCDGDPDCQ-- 208
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE D C Q C KCIP + CD C +D +DE S
Sbjct: 209 ---DESDE-IDCHVTCGPSQFTCTSPHKCIPQVYQCDGLEHC-----LDGSDE--AGCPS 257
Query: 335 HNAVLCH-PNELRC-GSSNQCVALSKFCDGKPDCS-NGEDEGPFCNNKADCE--NLKCSH 389
+ C+ +E C G+ +C+ L+ CD PDC + C C+ N C+
Sbjct: 258 TTSPGCNSSSEFDCFGTGMKCIPLTSVCDKVPDCQPTASPDELVCKEVNPCKTNNGGCAD 317
Query: 390 KCSPTPRGAM-CFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C AG P+ C+D +EC G C Q C NT SY C C EGY +
Sbjct: 318 KCIFNYNQQFHCECSAGFQLAPDNKTCIDVNECNEFGRCSQICVNTEGSYHCKCEEGYIM 377
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
P C A E S++F++ +D+R L+
Sbjct: 378 DPVLHYCKA----DGEEPSLLFANRIDLREYRLH 407
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 132/347 (38%), Gaps = 67/347 (19%)
Query: 165 CHPNEL-----------------------------------------RCGSSNQCVALSK 183
C E CG + C+ L
Sbjct: 15 CSTGEFACNGTACVPMRWVCDGDNDCDDGSDEEVDFCHSMTCKANQFSCGPGSACIPLQW 74
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCI 242
CDG+ DC NG+DE C QF C GKCI W CD DC +D SDE +
Sbjct: 75 QCDGESDCPNGQDEQHCNITSCDADQFRCKSDGKCITNRWVCDYDADC-DDKSDELDCPA 133
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKFHQCFNGQVQCALSK 301
C C + +C+P W CD + DC+ + +N D C + + CA
Sbjct: 134 RTCPPENFMCN-NGRCVPGIWKCDGDRDCTDGEDEENCQLATSDPSSPCSSREFTCADKM 192
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
CI W CD + DC D +DE V C P++ C S ++C+ CD
Sbjct: 193 SCIHIAWRCDGDPDCQ-----DESDE------IDCHVTCGPSQFTCTSPHKCIPQVYQCD 241
Query: 362 GKPDCSNGEDEG-------PFCNNKADCENLKCSHKCSPTPR--GAMCFCPAGQNPNKTQ 412
G C +G DE P CN+ ++ + KC P + C +P++
Sbjct: 242 GLEHCLDGSDEAGCPSTTSPGCNSSSEFDCFGTGMKCIPLTSVCDKVPDCQPTASPDELV 301
Query: 413 CVDADECLI-DGSCDQTCT-NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C + + C +G C C N + + C C+ G+ L PD K+C VN
Sbjct: 302 CKEVNPCKTNNGGCADKCIFNYNQQFHCECSAGFQLAPDNKTCIDVN 348
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 107 RLEKAGMHGENRSPLV-----TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
++EKAG+HG++R +V +++WP+ L IDY + LYW D+ L + + + G
Sbjct: 539 KIEKAGLHGDSRKVIVQSGNTASHLEWPNGLTIDYTTNRLYWVDAKLQVIGTCNLQGGDQ 598
Query: 162 AVL 164
++
Sbjct: 599 RII 601
>gi|157384998|ref|NP_002325.2| low-density lipoprotein receptor-related protein 4 precursor [Homo
sapiens]
gi|269849756|sp|O75096.4|LRP4_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 4;
Short=LRP-4; AltName: Full=Multiple epidermal growth
factor-like domains 7; Flags: Precursor
Length = 1905
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCALDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|380011543|ref|XP_003689861.1| PREDICTED: very low-density lipoprotein receptor-like [Apis florea]
Length = 891
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 155/370 (41%), Gaps = 74/370 (20%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCN--------------------- 202
C +E C S N +CVAL+ CDG DCS+G DE CN
Sbjct: 114 CTADEFTCHSGNGECVALAWMCDGHRDCSDGSDEAE-CNDTCRSDEFTCANKHCIQKTWV 172
Query: 203 ------------------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------- 237
C+P +F+C CI WKCDG DC D DE
Sbjct: 173 CDSDDDCGDGSDEKDCKPVTCSPSEFACSDNYCITSQWKCDGDFDC-PDRRDEIGCKYAD 231
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQV 295
+H G+ C CI +W+CD+E DC + DE H C Q
Sbjct: 232 GERHVHCNKKGEFDCGDDFSCIHESWVCDKEKDCP-----NGADELPKVCHNFTCRPDQF 286
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC + CI + C+ +++C+ D +DE K + A+ C P+ S C++
Sbjct: 287 QCQHIRNCISGHLYCNGKIECA-----DGSDE---KNCTTKAIGCDPSTQFECSEGSCIS 338
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN--PNKT 411
LS C+ DC N EDE +C N CS C P G C C AG N+T
Sbjct: 339 LSSVCNKNRDCINWEDENEKLCGVNECLKNNGGCSQICIDLPIGFRCDCSAGYRLIDNRT 398
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSS 470
C D DECL G+C Q C N S+ CSC GY P + C A + AS++F+
Sbjct: 399 -CDDIDECLEPGTCSQFCLNEKGSFKCSCAAGYLKDPSNHTRCKAA----EGHASLLFTR 453
Query: 471 TVDIRRIHLN 480
DIR++ L+
Sbjct: 454 RHDIRKVALD 463
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 150/392 (38%), Gaps = 106/392 (27%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSC 212
S N C + +C ++ +C+ L CDG DC + DE GP +C+ +F C
Sbjct: 25 STNNESCSLRQFQC-ANGKCIPLPWICDGTDDCGDKSDETIKKCEGP---QKCSDTEFKC 80
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEM 269
GKCIP +W CDG DC DGSDE P C + C + C + + +C+ W+CD
Sbjct: 81 TNGKCIPGTWHCDGDNDC-RDGSDEDPTVCRMKNCTADEFTCHSGNGECVALAWMCDGHR 139
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQ-------------------------VQCALSK- 301
DCS +D+ N D+F C N V C+ S+
Sbjct: 140 DCSDGSDEAECNDTCRSDEF-TCANKHCIQKTWVCDSDDDCGDGSDEKDCKPVTCSPSEF 198
Query: 302 -----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF-SHNAVLCH-PNELRCGSSNQCV 354
CI W CD + DC D DE KY V C+ E CG C+
Sbjct: 199 ACSDNYCITSQWKCDGDFDCP-----DRRDEIGCKYADGERHVHCNKKGEFDCGDDFSCI 253
Query: 355 ALSKFCDGKPDCSNGEDEGP--------------------------FCNNKADCENLKCS 388
S CD + DC NG DE P +CN K +C +
Sbjct: 254 HESWVCDKEKDCPNGADELPKVCHNFTCRPDQFQCQHIRNCISGHLYCNGKIECADGSDE 313
Query: 389 HKCSPTPRG-----------AMCF-----------CPAGQNPNKTQCVDADECLI-DGSC 425
C+ G C C ++ N+ C +ECL +G C
Sbjct: 314 KNCTTKAIGCDPSTQFECSEGSCISLSSVCNKNRDCINWEDENEKLC-GVNECLKNNGGC 372
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
Q C + + + C C+ GY L D ++C ++
Sbjct: 373 SQICIDLPIGFRCDCSAGYRL-IDNRTCDDID 403
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-NAV 163
+ R+EKAGM G +R+ +V ++QWP+ L +D +YW D+ L + S DG+ +
Sbjct: 584 EARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIGKKIYWVDAKLYIIGSCNYDGTGIRTI 643
Query: 164 LCHPNELR 171
L P LR
Sbjct: 644 LYSPEVLR 651
>gi|301772508|ref|XP_002921699.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Ailuropoda melanoleuca]
Length = 1934
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 177 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 231
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 232 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 286
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 287 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 336
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 337 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 395
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 396 QKCQMVRGVVQCTCHTGYRLTEDGHMCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 455
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 456 RPDRRSCKALG---PEPV-LLFANRIDIRQV 482
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 73 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 131
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 132 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 184
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 185 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 209
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1449 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1505
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1506 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1565
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G L HP L
Sbjct: 1566 DRIESADLNGKLRQALVSHVSHPFAL 1591
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 912 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFACLDGSKRKVL 969
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L++ N+ WP+ L +D L W D+H +E+ ++G+ L
Sbjct: 1220 KLERSGMDGSDRTVLISNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTLVS 1279
Query: 167 P 167
P
Sbjct: 1280 P 1280
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 519 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 578
Query: 166 HPN 168
N
Sbjct: 579 WQN 581
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 607 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGHRMYWVDAKHHVIERANLDGSHRKAV 664
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1438 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1494
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 826 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 885
Query: 168 N 168
N
Sbjct: 886 N 886
>gi|296479644|tpg|DAA21759.1| TPA: low density lipoprotein receptor-related protein 4 [Bos
taurus]
Length = 1891
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSVCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADCE--NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + +C N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAIQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCKLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES + G VL HP L
Sbjct: 1537 DRIESADLSGKLRQVLVSHVSHPFAL 1562
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWATNKLYWTDAGTDRIEVANTDGSMRTVLLWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|449268218|gb|EMC79088.1| Low-density lipoprotein receptor-related protein 8, partial
[Columba livia]
Length = 856
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/326 (32%), Positives = 144/326 (44%), Gaps = 34/326 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S+ C+++ CDG DC +G DE C P +F C CIPE W C
Sbjct: 85 CSPNEFQC-SNKSCISIIFVCDGDNDCGDGSDERKCSPLTCNPNEFQCNNSVCIPELWVC 143
Query: 225 DGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D DC ED SDE ++ C + QC + +CI NW CD + DC
Sbjct: 144 DNQPDC-EDQSDESVEKCGYDAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDCK----- 196
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C + QC CI CD+ DC DN+DE +
Sbjct: 197 DKSDEHDCPLVTCRPDEFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE---AGCIQES 247
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPT 394
P++ +C S +C+ K CD DC + DE P N+ N CSH C
Sbjct: 248 ACESPSKFQC-KSGECIDGGKVCDSHRDCRDWSDE-PLKECGINECSMNNGGCSHICKDL 305
Query: 395 PRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C C P + +K C D DEC +C Q C N Y C C EGY + K+C
Sbjct: 306 KIGYECECLPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNC 365
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHL 479
AV + +IF++ ++R+I L
Sbjct: 366 KAVG----KSPYLIFTNRHEVRKIDL 387
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQ-FSCG--MGKCIPESWKCDGFVDCLE 232
C+ CDG+ +C +G DE C + P + SCG KCIP SW+CDG DC E
Sbjct: 15 HCIQARWKCDGEEECPDGSDESEAACTKQVCPAEKISCGDLSNKCIPSSWRCDGQKDC-E 73
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
G DE C C + QC+ +K CI ++CD + DC D +DE C
Sbjct: 74 SGIDEAG-CTPACSPNEFQCS-NKSCISIIFVCDGDNDCG-----DGSDERKCSPLTCNP 126
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSS 350
+ QC S CIP W+CD + DC D +DE +K Y + C +E +CG+
Sbjct: 127 NEFQCNNS-VCIPELWVCDNQPDCE-----DQSDESVEKCGYDAKALNTCAAHEFQCGNG 180
Query: 351 NQCVALSKFCDGKPDCSNGEDEG--PFCNNKAD---CENLKC---------SHKCSPTPR 396
+C+ L+ CDG DC + DE P + D C + C H C
Sbjct: 181 -ECIHLNWKCDGDEDCKDKSDEHDCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSD 239
Query: 397 GAMCFCPAG-QNPNKTQCVDAD-----------------------ECLI------DGSCD 426
A C + ++P+K QC + EC I +G C
Sbjct: 240 EAGCIQESACESPSKFQCKSGECIDGGKVCDSHRDCRDWSDEPLKECGINECSMNNGGCS 299
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C + + Y C C GY L D K+C ++
Sbjct: 300 HICKDLKIGYECECLPGYKLL-DKKTCGDID 329
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L N DL P +D
Sbjct: 446 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNR-DLSEPRAIAVDPTRRFM 504
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LVT NI+WP+ + +D LYW DS L+++ + V+
Sbjct: 505 YWSDWGDKAKIEKAGLNGMGRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDVN 564
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 565 GSNRKVL 571
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAEC-TPGQFSCGMGKCIPE 220
V C P+E +CG C+ +K CD DC + DE G + C +P +F C G+CI
Sbjct: 207 VTCRPDEFQCGDGT-CIHGAKQCDKVHDCPDNSDEAGCIQESACESPSKFQCKSGECIDG 265
Query: 221 SWKCDGFVDCLEDGSDEP 238
CD DC D SDEP
Sbjct: 266 GKVCDSHRDC-RDWSDEP 282
>gi|168273096|dbj|BAG10387.1| low-density lipoprotein receptor-related protein 4 precursor
[synthetic construct]
Length = 1902
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCALDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLPA-- 98
+ R L T LA+++ RN + + + RL R IN+ L+ D+ A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLD--DIAAFP 1477
Query: 99 --PEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+F D ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +E
Sbjct: 1478 RKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIE 1537
Query: 153 SVRVDGSHNAVLC----HPNEL 170
S ++G VL HP L
Sbjct: 1538 SADLNGKLRQVLVGHVSHPFAL 1559
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|440903451|gb|ELR54106.1| Low-density lipoprotein receptor-related protein 4, partial [Bos
grunniens mutus]
Length = 1898
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 141 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 195
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 196 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 250
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 251 --DQSDERNCTTSVCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 300
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADCE--NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + +C N C+
Sbjct: 301 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCA 359
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 360 QKCQMVRGAIQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 419
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 420 RPDRRSCKALG---PEPV-LLFANRIDIRQV 446
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 37 CIPAQWQCDGDNDCGDHSDEDGCKLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 95
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 96 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 148
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 149 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 173
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 876 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 933
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1413 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1469
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1470 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1529
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES + G VL HP L
Sbjct: 1530 DRIESADLSGKLRQVLVSHVSHPFAL 1555
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1184 KLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1243
Query: 167 P 167
P
Sbjct: 1244 P 1244
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 483 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 542
Query: 166 HPN 168
N
Sbjct: 543 WQN 545
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 571 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 628
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1402 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1458
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 790 ISRAKWDGTGQEVVVDTSLESPAGLAIDWATNKLYWTDAGTDRIEVANTDGSMRTVLLWE 849
Query: 168 N 168
N
Sbjct: 850 N 850
>gi|118150808|ref|NP_001071311.1| low-density lipoprotein receptor-related protein 4 precursor [Bos
taurus]
gi|92090689|gb|ABE73152.1| low density lipoprotein receptor-related protein 4 [Bos taurus]
Length = 1905
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 155/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSVCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----NKADCE--NLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + +C N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCSVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAIQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCKLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES + G VL HP L
Sbjct: 1537 DRIESADLSGKLRQVLVSHVSHPFAL 1562
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWATNKLYWTDAGTDRIEVANTDGSMRTVLLWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|187952419|gb|AAI36669.1| Low density lipoprotein receptor-related protein 4 [Homo sapiens]
gi|187953301|gb|AAI36668.1| Low density lipoprotein receptor-related protein 4 [Homo sapiens]
Length = 1905
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCALDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVGHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|57157163|dbj|BAD83615.1| low density lipoprotein receptor-related protein 10 [Homo sapiens]
Length = 1905
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCALDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVGHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|72534477|dbj|BAE19679.1| low-density lipoprotein receptor-related protein 4 [Homo sapiens]
Length = 1950
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 196 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 250
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 251 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 305
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 306 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 355
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 356 GSPQCALDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 414
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 415 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 474
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 475 RPDRRSCKALG---PEPV-LLFANRIDIRQV 501
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 92 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 150
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 151 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 203
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 204 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 228
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 931 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 988
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLPA-- 98
+ R L T LA+++ RN + + + RL R IN+ L+ D+ A
Sbjct: 1468 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLINNSLD--DIAAFP 1525
Query: 99 --PEIFPLD----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+F D ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +E
Sbjct: 1526 RKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIE 1585
Query: 153 SVRVDGSHNAVLC----HPNEL 170
S ++G VL HP L
Sbjct: 1586 SADLNGKLRQVLVGHVSHPFAL 1607
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1239 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1298
Query: 167 P 167
P
Sbjct: 1299 P 1299
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 538 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 597
Query: 166 HPN 168
N
Sbjct: 598 WQN 600
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 626 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 683
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1457 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1513
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 845 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 904
Query: 168 N 168
N
Sbjct: 905 N 905
>gi|195453850|ref|XP_002073972.1| GK14390 [Drosophila willistoni]
gi|194170057|gb|EDW84958.1| GK14390 [Drosophila willistoni]
Length = 1102
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 152/373 (40%), Gaps = 76/373 (20%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P E C S + QC+ L+ CD DCS+G DE CN C +F+CG G+CI + W+
Sbjct: 344 CSPEEFTCKSGDGQCIPLAWMCDQNKDCSDGSDEA-MCNDTCRSDEFTCGNGRCIQKRWR 402
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD DC + ++ C Q C S CI W+CD + DC D +DE
Sbjct: 403 CDDDDDCGDGSDEKDCGPKPACAIDQFTCN-SGHCISRGWVCDGDYDCP-----DQSDES 456
Query: 284 --------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
F C + QC C+ +W+CD + DC D D H
Sbjct: 457 GCTDLTNILRSFRFCQAHEFQCRDRITCLHKSWVCDGDSDCPDGD-------DELPQNCH 509
Query: 336 NAVLCHPNELRCG-------------------------------------------SSNQ 352
N V C P++ +CG Q
Sbjct: 510 N-VTCRPDQFQCGDRSCIAGHLTCNGDKDCSDGSDEKKCDVASRANGCNATTEFDCGGGQ 568
Query: 353 CVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NP 408
C+ALSK CD + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 569 CIALSKVCDKRKDCPDGEDEPAGKCGVNECSTKNGNCMHRCVDLAVGHRCECNEGYKLSS 628
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASII 467
+K CVD +EC G C Q C N + C C GY P + C A + AS++
Sbjct: 629 DKRSCVDINECENPGMCSQICINEIGGFKCECEAGYMRDPRNHTRCKA----SEGHASLL 684
Query: 468 FSSTVDIRRIHLN 480
+ DIR+I L+
Sbjct: 685 LARRHDIRKIALD 697
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 77/147 (52%), Gaps = 12/147 (8%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
QC+ + CDG DC + DE F + C QF C GKCIP W+CD DC
Sbjct: 232 QCIPIRFVCDGDFDCKDQSDEQVESCKFKGSSCQEDQFRCTNGKCIPNKWRCDQEADC-A 290
Query: 233 DGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
DGSDE P C+H C N +V+C ++CIP +W+CD + DC D +DE K C
Sbjct: 291 DGSDETPELCMHYCQNNEVKCKNGEQCIPKSWICDGDYDCR-----DRSDESECKTKTCS 345
Query: 292 NGQVQCALS-KKCIPHNWLCDEEMDCS 317
+ C +CIP W+CD+ DCS
Sbjct: 346 PEEFTCKSGDGQCIPLAWMCDQNKDCS 372
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 98/195 (50%), Gaps = 24/195 (12%)
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSK 256
FC+ E QF C G+CIP + CDG DC + ++ +C + C Q +C +
Sbjct: 218 FCDTE--QKQFQCRNGQCIPIRFVCDGDFDCKDQSDEQVESCKFKGSSCQEDQFRCT-NG 274
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
KCIP+ W CD+E DC+ D +DE + H C N +V+C ++CIP +W+CD + D
Sbjct: 275 KCIPNKWRCDQEADCA-----DGSDETPELCMHYCQNNEVKCKNGEQCIPKSWICDGDYD 329
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGP 374
C D +DE K C P E C S + QC+ L+ CD DCS+G DE
Sbjct: 330 CR-----DRSDESECK-----TKTCSPEEFTCKSGDGQCIPLAWMCDQNKDCSDGSDEA- 378
Query: 375 FCNNKADCENLKCSH 389
CN+ + C +
Sbjct: 379 MCNDTCRSDEFTCGN 393
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 820 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNIISSANYDGSQRRQILY 879
Query: 167 PNEL 170
E
Sbjct: 880 SMEY 883
>gi|390349825|ref|XP_787118.3| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Strongylocentrotus purpuratus]
Length = 4677
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/243 (34%), Positives = 117/243 (48%), Gaps = 23/243 (9%)
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK--CIPH 306
Q CA +CIP W CD + DC D+ D + + C G QCA S+ C+P
Sbjct: 43 QFACADGTQCIPSPWRCDRDPDCR--DVSDEENCTYTGV-SCQTGFFQCASSEAQICLPE 99
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
++ CD ++DC D++DE D +C N C+A S CD PDC
Sbjct: 100 SFRCDGQIDCQ-----DHSDEGPDCPVPPPFACPPSMPYQCLDGNSCIAYSSICDFVPDC 154
Query: 367 SNGEDEGPFCN--NKADCENLKCS--HKCSPTPRGAMCFCPAGQNPNK---TQCVDADEC 419
+ DEG FCN N DC ++C C T G MC CP G N+ T C D +EC
Sbjct: 155 DDWSDEGAFCNPENGGDCTRMQCGDDQVCQETINGGMCICPIGYQVNQSNSTICEDINEC 214
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
I G+CDQ C N SY CSC GY +G+ DE A ++ ++ ++ ++++
Sbjct: 215 DIYGTCDQICKNIPGSYSCSCAGGYKEFSEGR------CQSDEDAKLLVANVDNLLQLNI 268
Query: 480 NGS 482
+GS
Sbjct: 269 DGS 271
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 141/295 (47%), Gaps = 34/295 (11%)
Query: 178 CVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ + CDGKPDC +G DE C +C +F C G+CI W CDG DC D SD
Sbjct: 3733 CITKNLTCDGKPDCGDGSDEQESLCKPDCAKNEFQCKDGRCIWIRWNCDGDPDC-NDQSD 3791
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
E + C + C + KC P W CD E DC D++DED + ++
Sbjct: 3792 EEDCENVSCHEDEFHCD-NNKCKPLMWRCDGEDDCG-----DSSDEDPE-----LCARLA 3840
Query: 297 CALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
C ++K C+ H ++CD C DN+DE + LC N+ +C +
Sbjct: 3841 CPVTKFRCSNHICVNHRFVCDGINTCG-----DNSDESF--CTPTEPPLCTANQFKC-KN 3892
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN- 407
++C+ ++ C+G +C + DE C C +++C+H+CS C C AG
Sbjct: 3893 HRCIDVNLLCNGVDNCQDRSDELD-CTKNPSCHSGDIQCAHRCSLVGGVHYCTCHAGYEL 3951
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGK-SCTAVNVP 459
P+ C D +EC G C QTC N + SY CSC GY LR +GK C A+ P
Sbjct: 3952 LPDGVSCGDVNECRQFGICSQTCENLNGSYDCSCVAGYKPLRINGKIYCEALGGP 4006
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 112/398 (28%), Positives = 161/398 (40%), Gaps = 87/398 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
Y C ++ E+ + H C P+ +C + +C++ S CD + DC + DE
Sbjct: 957 YDCGDSRDSDETHELCSGHIQKTCDPDVFKC-DNGRCISTSWHCDQEDDCGDNSDEKDC- 1014
Query: 202 NAECTPGQFSCGMGKCIPESWK-------------------------------------- 223
C G F C G CI +W+
Sbjct: 1015 -KYCREGLFECANGACISITWRCDRDDDCGDGSDEVDCAYSCDNETQFQCHVSLRCINID 1073
Query: 224 --CDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CDG +C ED SDE C C + QC ++CIP W CD E DC ++
Sbjct: 1074 LVCDGVQNC-EDASDEREKCSFHPVVCNMHEFQCD-EQRCIPETWKCDGEEDC-----IN 1126
Query: 279 NTDEDWDKFHQCFNGQV---------QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
TDE + C N V +C KCIP W CD DC D +DE
Sbjct: 1127 GTDE-----YNCTNPAVPVCREETHYKCPNENKCIPDAWQCDGIADCQ-----DQSDE-- 1174
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+ + C N+ +C + C+ L CDG C G DE + + C+ C
Sbjct: 1175 ---VNCQLLRCEVNQWQCENHTMCLPLHNLCDGAQQCIGGTDE--LDCDLSMCDKAACKE 1229
Query: 390 KCSPTP-RGAMCFCPAGQ--NP-NKTQCV-DADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+C P +G MC+CP G+ +P + T+C+ D C G C Q C N +YVC C GY
Sbjct: 1230 ECQVIPGKGVMCYCPEGKVIDPEDSTRCILDTKMCTKRGRCSQQCINGKGTYVCKCYPGY 1289
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ DG +C + +IFS+ +RR++L S
Sbjct: 1290 QMASDGWTCKSNATAN---PYLIFSNRNQLRRVNLATS 1324
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/376 (28%), Positives = 152/376 (40%), Gaps = 89/376 (23%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMGKCIPESWKC 224
+ C + + C+ S CDG DC +G DE A C GQF C G+CI +SW C
Sbjct: 2839 VNCPNFSVCIFHSWICDGVNDCGDGSDEKNCSSDSPTRAPCEEGQFQCRNGRCIQQSWVC 2898
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC ++ +E + C C Q QCA + +CIP W+CD + DC DN+DE+
Sbjct: 2899 DRENDCGDNFDEEQDECSSTCPADQNQCA-NGQCIPKLWVCDRDNDCG-----DNSDEN- 2951
Query: 285 DKFHQCFN-----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ H C N +C ++CI +W+CD + DC D DE N
Sbjct: 2952 EAIHTCSNHTCTGDMFRCTNQRRCISRSWVCDGDNDCG-----DAQDEH--SSLGCNVTR 3004
Query: 340 CHPNELRCG----------------------------------------SSNQCVALSKF 359
C E C S +C+
Sbjct: 3005 CKDGEFACANGRCIQQSWACDHDDDCGDGSDEPKDSCDFPACLEDEHRCSDGRCLPKDWV 3064
Query: 360 CDGKPDCSNGEDE-------GPFCN----NKADCENLKCSHKCSPTPRGAMCFCP--AGQ 406
CDG DC +G DE P N + C+N KC P+ A C G
Sbjct: 3065 CDGDKDCHDGSDETICNVSPSPLNNCTKHHLFQCDNGKC------IPQSARCNTSDECGD 3118
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
N ++ C C ID C Q C + + + C C EG+ L D +C A+ Q +P +
Sbjct: 3119 NSDEVDC----RCDIDYPCSQRCVDLNAHFWCYCVEGFKLLDDQVTC-ALEADQPKPY-L 3172
Query: 467 IFSSTVDIRRIHLNGS 482
+FS+ +R + ++GS
Sbjct: 3173 LFSNRYQLRTVGVDGS 3188
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/214 (37%), Positives = 102/214 (47%), Gaps = 26/214 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C N+++C SSN C+ S CDG C+ GEDE +C QF C G+CIP+ W+
Sbjct: 3559 CLQNQIKCESSNICIPKSFQCDGIKHCAQGEDEETCGQVQCRDDQFQCNSTGRCIPDVWR 3618
Query: 224 CDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC ED SDE TC + C + C + +CIP W CD E DC+ D +DE
Sbjct: 3619 CDGEDDC-EDQSDEMGTCRNLSCPVNEFACHGNGRCIPQRWQCDGERDCA-----DGSDE 3672
Query: 283 DWDKFHQCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
K C N G + + CIP W DD DN+DED N+
Sbjct: 3673 ---KPQDCSNRSCPGDLFRCKNYNCIPSLW-----RCDGDDDCGDNSDED-----GCNSS 3719
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
RC C+ + CDGKPDC +G DE
Sbjct: 3720 CDQEASFRC-EDGICITKNLTCDGKPDCGDGSDE 3752
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 104/224 (46%), Gaps = 30/224 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C N +RC ++ QCV+ ++ CDGK DC++ DE N C QF C G+CI S K
Sbjct: 2742 FCRENYIRC-NNGQCVSANRRCDGKDDCNDNSDE---LNCGCKENQFMCKSGECIALSSK 2797
Query: 224 CDGFVDCLEDGSDE-------------PNTCIHQCFNGQ--VQCALSKKCIPHNWLCDEE 268
CD +DC +DGSDE N NG V C CI H+W+CD
Sbjct: 2798 CDHRLDCQDDGSDEDKQECPEVDCAEWGNEMFLLLPNGTTFVNCPNFSVCIFHSWICDGV 2857
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC N D C GQ QC + +CI +W+CD E DC DN DE+
Sbjct: 2858 NDCGDGSDEKNCSSDSPTRAPCEEGQFQCR-NGRCIQQSWVCDRENDCG-----DNFDEE 2911
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D+ S C ++ +C ++ QC+ CD DC + DE
Sbjct: 2912 QDECSS----TCPADQNQC-ANGQCIPKLWVCDRDNDCGDNSDE 2950
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 128/309 (41%), Gaps = 57/309 (18%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR--------- 155
++R+E +G NR +V ++ P + D +YW D V+
Sbjct: 3351 EDRIESVSWNGTNRHTVVGSDV--PHIFAMSMFGDYIYWTDWDQRRVKRAHKFTGQDQLD 3408
Query: 156 ----VDGSHNAVLCHPNELR--------CGSSNQCVALSKFC----DGKPDCS-----NG 194
V + + HP LR CG +N S C DG C+
Sbjct: 3409 LVLVVHRPMDIQVLHP--LRQPRIENNPCGKNNG--GCSNLCLLNQDGGRTCACPNNFYV 3464
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCA 253
+G C + CT QF C KCIP W CD DC D SDEP+TC C GQ QC
Sbjct: 3465 ASDGMTCVSNCTGSQFVCRNDKCIPSWWHCDQEDDC-GDRSDEPSTCRPFYCIPGQFQCE 3523
Query: 254 LSK----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
+ +CI ++CD E DC D +DE H C Q++C S CIP ++
Sbjct: 3524 NTSESDAECINPAFICDGEEDCR-----DGSDEFHCLNHSCLQNQIKCESSNICIPKSFQ 3578
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD C+ + DE+ + V C ++ +C S+ +C+ CDG+ DC +
Sbjct: 3579 CDGIKHCAQGE-----DEE-----TCGQVQCRDDQFQCNSTGRCIPDVWRCDGEDDCEDQ 3628
Query: 370 EDEGPFCNN 378
DE C N
Sbjct: 3629 SDEMGTCRN 3637
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 109/233 (46%), Gaps = 37/233 (15%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSC-GMGKCIPE 220
V C ++ +C S+ +C+ CDG+ DC + DE C N C +F+C G G+CIP+
Sbjct: 3597 VQCRDDQFQCNSTGRCIPDVWRCDGEDDCEDQSDEMGTCRNLSCPVNEFACHGNGRCIPQ 3656
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD-- 278
W+CDG DC + ++P C ++ G + + CIP W CD + DC + D
Sbjct: 3657 RWQCDGERDCADGSDEKPQDCSNRSCPGDLFRCKNYNCIPSLWRCDGDDDCGDNSDEDGC 3716
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+ D + +C +G CI N CD + DC D +DE
Sbjct: 3717 NSSCDQEASFRCEDG--------ICITKNLTCDGKPDCG-----DGSDE--------QES 3755
Query: 339 LCHP----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
LC P NE +C +C+ + CDG PDC++ DE DCEN+ C
Sbjct: 3756 LCKPDCAKNEFQC-KDGRCIWIRWNCDGDPDCNDQSDE-------EDCENVSC 3800
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 108/252 (42%), Gaps = 64/252 (25%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNAECTPGQFSCGMGKCIPESWKCD 225
+E C ++ +C+ + CDG DC + DE G N C P +F C KCIP W CD
Sbjct: 896 DEFEC-NNGRCIEHTWLCDGDNDCGDNTDETHGGCYNQTCGPNKFQCPNNKCIPMRWTCD 954
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCAL--------SKKCIPHNWLCDEEMDCSTDDIV 277
G DC D D T H+ +G +Q + +CI +W CD+E DC
Sbjct: 955 GDYDC-GDSRDSDET--HELCSGHIQKTCDPDVFKCDNGRCISTSWHCDQEDDCG----- 1006
Query: 278 DNTDED-----WDKFHQCFNG--------------------------------QVQCALS 300
DN+DE + +C NG Q QC +S
Sbjct: 1007 DNSDEKDCKYCREGLFECANGACISITWRCDRDDDCGDGSDEVDCAYSCDNETQFQCHVS 1066
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CI + +CD +C D +DE + S + V+C+ +E +C +C+ + C
Sbjct: 1067 LRCINIDLVCDGVQNCE-----DASDE--REKCSFHPVVCNMHEFQC-DEQRCIPETWKC 1118
Query: 361 DGKPDCSNGEDE 372
DG+ DC NG DE
Sbjct: 1119 DGEEDCINGTDE 1130
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 63/287 (21%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-VLC 165
R+E+A M G NR+ V + +QWP+ L +D ++ +LYWCD+ + + ++G+ + V
Sbjct: 719 RIERAFMDGRNRTVFVNEYLQWPNGLSLDKDRGVLYWCDAFHDRISRKFLNGTGDGTVTI 778
Query: 166 HPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG---QFSCGMGKCIPES 221
P EL N ++ + D +E G ++ M P S
Sbjct: 779 RPQPEL-----NHPFGITHYKD------------ILFWSEYRTGFIYRYDTTMETPTPVS 821
Query: 222 WKCDGFVDCLE--DGSDEPNT---------CIHQCF---NGQV-QCALSKKCIPHNWLCD 266
+ G V L+ D + + T C H C +G+V QC KK I + C
Sbjct: 822 LRKGGLVFELKLYDANAQKGTNACSVKNGGCEHLCLPVPDGKVCQCENGKKLI-NGTQCI 880
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNG--QVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
E D D+ ++ +C + +C + +CI H WLCD + DC DN
Sbjct: 881 E-------------DPDYVRYSRCTKASDEFECN-NGRCIEHTWLCDGDNDCG-----DN 921
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
TDE ++ C PN+ +C +N+C+ + CDG DC + D
Sbjct: 922 TDETHGGCYNQT---CGPNKFQC-PNNKCIPMRWTCDGDYDCGDSRD 964
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 104 LDERLEKAGMHGENRSPLV-TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++ ++E++ ++GENR+ ++ + I WP+ LVID+N D+LYWCD+ N + V ++G +
Sbjct: 2214 VEPKIERSLLNGENRTVIINSSKINWPNGLVIDFNTDMLYWCDAGHNNIARVDLNGGNYK 2273
Query: 163 VL 164
V+
Sbjct: 2274 VI 2275
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 27/180 (15%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSKKCIPHN 262
C G F+C G C CDG C DGSDE P C H+ C ++C + +C+ N
Sbjct: 2702 CQVGDFTCSDGTCTRYEDTCDGKNQC-SDGSDEDPRYCSHRFCRENYIRCN-NGQCVSAN 2759
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD + DC+ DN+DE C Q C S +CI + CD +DC
Sbjct: 2760 RRCDGKDDCN-----DNSDE---LNCGCKENQFMCK-SGECIALSSKCDHRLDCQD---- 2806
Query: 323 DNTDEDWDK-------YFSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DED + + + L PN + C + + C+ S CDG DC +G DE
Sbjct: 2807 DGSDEDKQECPEVDCAEWGNEMFLLLPNGTTFVNCPNFSVCIFHSWICDGVNDCGDGSDE 2866
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G + LVT+ IQWP++L +DY D +YW D+ + +ESV +G++ +
Sbjct: 3311 IGRASLDGRYFTRLVTEKIQWPNALTVDYTTDRVYWGDAREDRIESVSWNGTNRHTV 3367
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 128/329 (38%), Gaps = 77/329 (23%)
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
E FP R++++ G+N + ++T IQ P+ + ID+ +L+W D+ + +E DG
Sbjct: 2531 EAFP---RIQRSSTSGQNVTNIITDQIQMPNGIGIDHKSRLLFWSDAKQDKIERCDYDGQ 2587
Query: 160 HNAVL-----CHPNELRCGS---------SNQCVALSKFCDGKPDCSNGE-DEGPFCNAE 204
+ VL HP L + K+ + + P
Sbjct: 2588 NRVVLLITEPVHPFGLAVFDDYLYWTDWVRRAVLRADKYTAAEVTVLRANIPQQPMGIVV 2647
Query: 205 CTPGQFSCGMGKCIPESWKCD--------GFVDC-------LEDGSDEPNTCIHQCFNGQ 249
+C C+ ++ C+ G V C +EDGS + I C G
Sbjct: 2648 MAADANNCFQWPCLHDNGGCEDTCQTNVTGHVLCSCPEGKRVEDGSRCIDL-ITNCQVGD 2706
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---------WDKFHQCFNGQVQCALS 300
C+ C + CD + CS D +DED + + +C NGQ
Sbjct: 2707 FTCS-DGTCTRYEDTCDGKNQCS-----DGSDEDPRYCSHRFCRENYIRCNNGQ------ 2754
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
C+ N CD + DC+ DN+DE C N+ C S +C+ALS C
Sbjct: 2755 --CVSANRRCDGKDDCN-----DNSDE--------LNCGCKENQFMC-KSGECIALSSKC 2798
Query: 361 DGKPDCS-NGEDEGPFCNNKADCENLKCS 388
D + DC +G DE +K +C + C+
Sbjct: 2799 DHRLDCQDDGSDE-----DKQECPEVDCA 2822
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 49/113 (43%), Gaps = 11/113 (9%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGK---CIPESWK 223
+ C QC+ CD PDC + DE + C G F C + C+PES++
Sbjct: 43 QFACADGTQCIPSPWRCDRDPDCRDVSDEENCTYTGVSCQTGFFQCASSEAQICLPESFR 102
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQ-----VQCALSKKCIPHNWLCDEEMDC 271
CDG +DC +D SDE C QC CI ++ +CD DC
Sbjct: 103 CDGQIDC-QDHSDEGPDCPVPPPFACPPSMPYQCLDGNSCIAYSSICDFVPDC 154
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ +A M G + +V N+ P+S+ IDY D LYW DS + +ES +DG
Sbjct: 4161 INRAHMDGSHVERIVEDNLAQPTSIAIDYVSDRLYWADSKVRLIESSNMDGG 4212
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 14/72 (19%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQ-----WPSSLVIDYNQDILYWCDSHL 148
W+ AP R+E+A M G NRS +V NI WP+ L IDY++ +YW D+
Sbjct: 1446 WENRAP-------RIERASMSGANRSIIV--NITQLEGGWPNGLTIDYSEKRIYWIDARS 1496
Query: 149 NTVESVRVDGSH 160
+ + + +GS+
Sbjct: 1497 DAIHAALYNGSN 1508
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G R L I +P + DY +Y+ D+ L V++ R DG+ ++
Sbjct: 401 KIERANMDGSGRLNLNITKIVFPHGITADYAAQRIYFADTQLEMVQTARYDGTGQRIIAQ 460
Query: 167 PNEL 170
+ +
Sbjct: 461 GSRV 464
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 32/176 (18%)
Query: 3 HQCFNGQ----VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------DWDKYFKRIL 52
QC NG+ +C + W C + I N ++ +Y +
Sbjct: 1272 QQCINGKGTYVCKCYPGYQMASDGWTCKSNATANPYLIFSNRNQLRRVNLATSEYNVLVF 1331
Query: 53 NGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG 112
N +++A++F++ N S+ + + + + W LDE AG
Sbjct: 1332 NLHNSIAVDFHYSNSSIYWTDVVD-----------DKIYRGW---------LDENSPNAG 1371
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+ N P++ + L +D+ LYW +SHL+ +E R+DG+ + N
Sbjct: 1372 LR--NIEPVIEAGLATCEGLAVDWIGGNLYWVESHLDQIEVARLDGAMRTTVVASN 1425
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 80/203 (39%), Gaps = 49/203 (24%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----------------DWD 45
+ QC NG KCIP + C+ ++D+ DN+DE D +
Sbjct: 3095 LFQCDNG--------KCIPQSARCN-----TSDECGDNSDEVDCRCDIDYPCSQRCVDLN 3141
Query: 46 KYF-------KRILNGTHTLALEFNHRNQSLCFIQQQNVSSV--------RLRCAQINDL 90
+F ++L+ T ALE + L F + + +V L+ N +
Sbjct: 3142 AHFWCYCVEGFKLLDDQVTCALEADQPKPYLLFSNRYQLRTVGVDGSNYTTLQVNVTNAV 3201
Query: 91 LNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK-----NIQWPSSLVIDYNQDILYWCD 145
+D I+ D L+ + + N + T+ + P + +D+ LYWCD
Sbjct: 3202 ALDYDWEERMIYWSDVTLQNSKISRANITHGTTEVLHDLGVLNPDGIAVDWAGRNLYWCD 3261
Query: 146 SHLNTVESVRVDGSHNAVLCHPN 168
LN +E R++GS+ + N
Sbjct: 3262 KGLNVIEVSRLNGSYRKTIIKEN 3284
>gi|403255511|ref|XP_003920469.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Saimiri boliviensis
boliviensis]
Length = 2080
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 323 CSDKEFRC-SDGSCIAEHWYCDGDSDCKDGSDEESCPSAVPVPPCNLE----EFQCAYGR 377
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 378 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDTDCD--- 432
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 433 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 482
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 483 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 541
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 542 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 601
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 602 RPDRRSCKALG---PEPV-LLFANRIDIRQV 628
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 219 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 277
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 278 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 330
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 331 S-DGSCIAEHWYCDGDSDCK-----DGSDEE 355
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1595 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1651
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1652 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1711
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1712 DRIESADLNGKLRQVLVSHVSHPFAL 1737
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 1058 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1115
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G+ L
Sbjct: 1364 NAKLERSGMDGSDRTVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGASRHTL 1423
Query: 165 CHP 167
P
Sbjct: 1424 VSP 1426
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 665 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 724
Query: 166 HPN 168
N
Sbjct: 725 WQN 727
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 753 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 810
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1584 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1640
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 972 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 1031
Query: 168 N 168
N
Sbjct: 1032 N 1032
>gi|410265850|gb|JAA20891.1| low density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 1905
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPVPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|281360959|ref|NP_001162769.1| CG8909, isoform C [Drosophila melanogaster]
gi|209418004|gb|ACI46540.1| IP21864p [Drosophila melanogaster]
gi|272506125|gb|ACZ95304.1| CG8909, isoform C [Drosophila melanogaster]
Length = 2008
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 279 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 337
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 338 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 392
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 393 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSLGSEHPLTCGSDEF 447
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 448 TC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 506
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 507 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTDID 566
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 567 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 622
Query: 476 RIHLN 480
R+ L+
Sbjct: 623 RVTLS 627
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ +YW D+ + +E +DGS N +L
Sbjct: 749 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILS 808
Query: 166 ----HPNEL 170
HP L
Sbjct: 809 THLPHPFAL 817
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1366 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1425
Query: 164 --LCHPNELRCGSSN 176
L HP L N
Sbjct: 1426 SSLHHPYALALSDDN 1440
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1061 DPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1120
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1121 LNGLGHPFGL 1130
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1324 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1383
Query: 167 PN 168
N
Sbjct: 1384 AN 1385
>gi|24642347|ref|NP_727914.1| CG8909, isoform B [Drosophila melanogaster]
gi|7293154|gb|AAF48538.1| CG8909, isoform B [Drosophila melanogaster]
Length = 2009
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 279 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 337
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 338 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 392
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 393 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSLGSEHPLTCGSDEF 447
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 448 TC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 506
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 507 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGSNECACRLGYVMDKNKVNCTDID 566
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 567 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 622
Query: 476 RIHLN 480
R+ L+
Sbjct: 623 RVTLS 627
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ +YW D+ + +E +DGS N +L
Sbjct: 749 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILS 808
Query: 166 ----HPNEL 170
HP L
Sbjct: 809 THLPHPFAL 817
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1366 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1425
Query: 164 --LCHPNELRCGSSN 176
L HP L N
Sbjct: 1426 SSLHHPYALALSDDN 1440
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1061 DPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1120
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1121 LNGLGHPFGL 1130
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1324 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1383
Query: 167 PN 168
N
Sbjct: 1384 AN 1385
>gi|401709449|gb|AFN22071.2| low density lipoprotein receptor-related protein 8 [Anas
platyrhynchos]
Length = 917
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 143/326 (43%), Gaps = 34/326 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E +C S+ C+++ CDG DC +G DE C P +F C CIPE W C
Sbjct: 149 CSPSEFQC-SNKTCISIIFVCDGDNDCGDGSDERKCSPLTCNPNEFQCNNSMCIPELWVC 207
Query: 225 DGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D DC +D SDE ++ C + QC + +CI NW CD + DC
Sbjct: 208 DNQPDC-DDQSDESVEKCGYNAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDCK----- 260
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C QC CI CD+ DC DN+DE +
Sbjct: 261 DKSDEQDCPLVTCRPDGFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE---AGCVQES 311
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPT 394
P++ +C S +C+ K CD DC + DE P N+ N CSH C
Sbjct: 312 ACESPSKFQC-KSGECIDGGKVCDSHKDCRDWSDE-PLKECGINECSMNNGGCSHICKDL 369
Query: 395 PRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C CP G +K C D DEC +C Q C N Y C C EGY + K+C
Sbjct: 370 KIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNC 429
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHL 479
AV + +IF++ ++R+I L
Sbjct: 430 KAVG----KSPYLIFTNRHEVRKIDL 451
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 146/382 (38%), Gaps = 92/382 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G C ++ +C + +C+ CD DCS+ DE C F+C G C
Sbjct: 22 GKGGVKECEEDQFQC-RNERCIPAIWKCDEDDDCSDNSDEADCPKKTCAESDFTCDNGHC 80
Query: 218 IPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST- 273
IP WKCDG +C DGSDE C Q C ++ C S KCIP +W CD + DC +
Sbjct: 81 IPARWKCDGEEEC-PDGSDESEAACTKQVCPAEKISCGDSSNKCIPSSWRCDGQKDCESG 139
Query: 274 --------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+D D +DE C + QC S
Sbjct: 140 IDEAGCTPACSPSEFQCSNKTCISIIFVCDGDNDCGDGSDERKCSPLTCNPNEFQCNNS- 198
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQCVALSKF 359
CIP W+CD + DC D +DE +K Y + C +E +CG+ +C+ L+
Sbjct: 199 MCIPELWVCDNQPDCD-----DQSDESVEKCGYNAKALNTCAAHEFQCGNG-ECIHLNWK 252
Query: 360 CDGKPDCSNGEDEG--PFCNNKAD---CENLKC---------SHKCSPTPRGAMCFCPAG 405
CDG DC + DE P + D C + C H C A C +
Sbjct: 253 CDGDEDCKDKSDEQDCPLVTCRPDGFQCGDGTCIHGAKQCDKVHDCPDNSDEAGCVQESA 312
Query: 406 -QNPNKTQCVDAD-----------------------ECLI------DGSCDQTCTNTHLS 435
++P+K QC + EC I +G C C + +
Sbjct: 313 CESPSKFQCKSGECIDGGKVCDSHKDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIG 372
Query: 436 YVCSCTEGYTLRPDGKSCTAVN 457
Y C C GY L D K+C ++
Sbjct: 373 YECECPPGYKLL-DKKTCGDID 393
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L N DL P +D
Sbjct: 510 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNR-DLSEPRAIAVDPTRRFM 568
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV NI+WP+ + +D LYW DS L+++ + +
Sbjct: 569 YWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 628
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 629 GSNRKVL 635
>gi|390179009|ref|XP_003736778.1| GA27443, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859675|gb|EIM52851.1| GA27443, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 155/375 (41%), Gaps = 73/375 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A C P+E C + QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 237 KARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQ 295
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDEPN 239
+ W CDG DC D SDE +
Sbjct: 296 KRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDC-SDASDERS 354
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + QC C+ H+WLCD + DC D DE K C
Sbjct: 355 CANVTKTTTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRP 409
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP-NELRCGSS 350
Q QC + CI + C+ + DC+ D +DE D C+ +E CG
Sbjct: 410 DQFQCG-DRSCIAGHLTCNGDKDCA-----DGSDEKDCSLSLGTTKGACNATSEFDCGG- 462
Query: 351 NQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-- 406
QC+ALS+ CD + DC +GEDE G N+ +N C H C G C C G
Sbjct: 463 GQCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKL 522
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPAS 465
+ +K CVD DEC G+C Q C N + C C GY P + C A + AS
Sbjct: 523 SGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHAS 578
Query: 466 IIFSSTVDIRRIHLN 480
++ + DIR+I L+
Sbjct: 579 LLLARRHDIRKIALD 593
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 116/275 (42%), Gaps = 76/275 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C + + C+ + CDG DC + DE F A C+ QF C G CIP
Sbjct: 157 CDEKQFQCRNGD-CIPIRYVCDGDADCKDHSDEQVTECKFLEATCSADQFRCTNGNCIPN 215
Query: 221 SWKCDGFVDCLEDGSDE------PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
W+CD DC DGSDE TC + C NG+ Q C+P W+CD+ DC
Sbjct: 216 KWRCDQENDC-ADGSDEATALCKARTCSPDEYACKNGEGQ------CVPLAWMCDQSKDC 268
Query: 272 STDDIVDNTDE-------DWDKFHQCFNGQ-------------------------VQC-A 298
S D +DE D+F C NG+ V C A
Sbjct: 269 S-----DGSDEHNCNQTCRSDEF-TCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPCDA 322
Query: 299 LSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+++ CI W+CD + DCS D +DE + C +E +C
Sbjct: 323 VAEHTCTNGACIAKRWVCDGDPDCS-----DASDERSCANVTKTTTPCLAHEYQCKDRIT 377
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 378 CLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 407
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 716 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 775
Query: 167 PNE 169
E
Sbjct: 776 STE 778
>gi|17224416|gb|AAL36970.1| LDLR dan [Mus musculus]
Length = 1905
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 153/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTRHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|358410952|ref|XP_003581886.1| PREDICTED: low-density lipoprotein receptor-related protein 1B [Bos
taurus]
Length = 2204
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 145/521 (27%), Positives = 215/521 (41%), Gaps = 99/521 (19%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQ 73
+++C+PH+ LCD E DC DN+DE K + A+EF + +C I
Sbjct: 165 YNRRCVPHSKLCDGENDCG-----DNSDELDCKV-------STCAAVEFRCTD-GMC-IP 210
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ + + CA +D N + + L ++ G N + L + +
Sbjct: 211 RSARCNQNIDCADASDEKNCNNTDCTYFYKLG--VKTTGFIRCNSTSLCVL-----PAWI 263
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 193
D + D + D V+ N C N C S +C+ + CDG+ DC +
Sbjct: 264 CDGSNDCGDYSDELKCPVQ--------NKHKCEENYFGC-PSGRCILNTWVCDGQKDCED 314
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQ 251
G DE C+A C+ QF+C KCI + W CDG DC EDG DE ++ C
Sbjct: 315 GLDEF-HCDASCSWNQFACSTEKCISKHWICDGEDDC-EDGLDESDSICGTITCAADMFS 372
Query: 252 CALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKF----------------- 287
C S+ C+P +WLCD E DC ST N D + F
Sbjct: 373 CQGSRACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHD 432
Query: 288 ---------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
QC + CA + + W CD + DC+ D++DE
Sbjct: 433 DDCGDGSDESLQCGYRQCNAEEFSCADGRCLLNTQWQCDGDFDCT-----DHSDE----- 482
Query: 333 FSHNAVLCHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
+ C E C SS +C+ CD K DC +G DE N+ + +
Sbjct: 483 -APINPKCKSAEQSCNSSFFMCKNGRCIPSGALCDNKDDCGDGSDERNCHINECLSKKVS 541
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC + C Q C NT+ +Y C CT+
Sbjct: 542 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSLGFPCSQQCINTYGTYKCLCTD 600
Query: 443 GYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++P + C +++ DE +I + +IR+I +GS
Sbjct: 601 GYEIQPANPNGCKSLS---DEEPFLILADHHEIRKISTDGS 638
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 147/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 1137 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKNCE 1193
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 1194 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKAHCI 1251
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 1252 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 1301
Query: 314 MDCS--------------------------------------TDDIVDNTDED-WDKYFS 334
DC DD DN+DED +
Sbjct: 1302 DDCGDNSDEAPDMCDKFLCPPTRPHRCRNNRICLQPEQMCNGIDDCGDNSDEDPCGGKLT 1361
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---------------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE C +
Sbjct: 1362 YKARPCKKDEFAC-SNKKCIPVDLQCDQLDDCGDGSDEQGCRITPSEYTCEDNVNPCGDD 1420
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C NT SY
Sbjct: 1421 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINTEGSYK 1471
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 1472 CVCHQNFQER 1481
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 922 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 980
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 981 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDEK 1034
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 1035 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 1084
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 1085 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 1112
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 96/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCDG DC +
Sbjct: 1128 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCISAKWKCDGHEDC-KY 1185
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 1186 GEDEKNCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 1238
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 1239 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 1289
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 1290 LCKLHFWVCDGEDDCGDNSDEAP 1312
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 962 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 1020
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 1021 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 1074
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 1075 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTLK 1123
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 1124 DFLCANGD-CVSSRFWCDGDFDCADGSDE 1151
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 1000 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 1059
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 1060 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 1112
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 1113 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 1160
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 1161 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 1189
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 1041 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 1100
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDE 282
D DC D SDE N C CA + C+ + CD + DC+ +D+ T
Sbjct: 1101 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCADGSDERNCETSC 1158
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D+F QC NGQ CI W CD DC + N + + C
Sbjct: 1159 SKDQF-QCSNGQ--------CISAKWKCDGHEDCKYGEDEKNCEP--------ASPTCSS 1201
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C S C++ S C+G+ DC++G DE
Sbjct: 1202 SEYICASGG-CISASLKCNGEYDCADGSDE 1230
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 98/230 (42%), Gaps = 31/230 (13%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++C+PH+ LCD E
Sbjct: 120 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCVPHSKLCDGE 179
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +C CIP + C++ +DC+ N +
Sbjct: 180 NDCG-----DNSDELDCKVSTCAAVEFRCT-DGMCIPRSARCNQNIDCADASDEKNCNNT 233
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
YF V +RC S++ CV + CDG DC + DE LKC
Sbjct: 234 DCTYFYKLGVK-TTGFIRCNSTSLCVLPAWICDGSNDCGDYSDE------------LKCP 280
Query: 388 ---SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 281 VQNKHKCEENYFG----CPSGRCILNTWVCDGQKDCEDGLDEFHCDASCS 326
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DGS + V
Sbjct: 1657 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDGSDSVVSVTS 1716
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 1717 KQGLLHPHRI 1726
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 17/119 (14%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER-------- 107
+ LA+++ +N +++ + +L +L S L P LD R
Sbjct: 695 NALAVDWIGKNLYWSDTEKRIIEVSKLN-GLYPTILVSKRLKFPRDLSLDPRAGYLYWID 753
Query: 108 ------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH
Sbjct: 754 CCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSH 810
>gi|410225986|gb|JAA10212.1| low density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 1905
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPVPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|194894101|ref|XP_001978008.1| GG17929 [Drosophila erecta]
gi|190649657|gb|EDV46935.1| GG17929 [Drosophila erecta]
Length = 2009
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 279 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 337
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 338 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 392
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 393 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSLGSEHPLTCGSDEF 447
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 448 TC-NNGRCILKTWLCDGYPDCATGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 506
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 507 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNCTDID 566
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 567 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 622
Query: 476 RIHLN 480
R+ L+
Sbjct: 623 RVTLS 627
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ +YW D+ + +E +DGS N +L
Sbjct: 749 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILS 808
Query: 166 ----HPNEL 170
HP L
Sbjct: 809 THLPHPFAL 817
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1366 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1425
Query: 164 --LCHPNELRCGSSN 176
L HP L N
Sbjct: 1426 SSLHHPYALALSDDN 1440
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1061 DPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1120
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1121 LNGLGHPFGL 1130
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1324 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1383
Query: 167 PN 168
N
Sbjct: 1384 AN 1385
>gi|387604224|gb|AFJ93120.1| low density lipoprotein receptor-related protein 8 transcript
variant 1 [Anas platyrhynchos]
Length = 917
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/326 (32%), Positives = 143/326 (43%), Gaps = 34/326 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE +C S+ C+++ CDG DC +G DE C P +F C CI E W C
Sbjct: 149 CSPNEFQC-SNKTCISIIFVCDGDNDCGDGSDERKCSPLTCNPNEFQCNNSMCISELWVC 207
Query: 225 DGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D DC +D SDE ++ C + QC + +CI NW CD + DC
Sbjct: 208 DNQPDC-DDQSDESVEKCGYDAKALNTCAAHEFQCG-NGECIHLNWKCDGDEDCK----- 260
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D +DE C + QC CI CD+ DC DN+DE +
Sbjct: 261 DKSDEQDCPLVTCRPDEFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE---AGCVQES 311
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPT 394
P++ +C S +C+ K CD DC + DE P N+ N CSH C
Sbjct: 312 ACESPSKFQC-KSGECIDGGKVCDSHKDCRDWSDE-PLKECGINECSMNNGGCSHICKDL 369
Query: 395 PRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G C CP G +K C D DEC +C Q C N Y C C EGY + K+C
Sbjct: 370 KIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNC 429
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHL 479
AV + +IF++ ++R+I L
Sbjct: 430 KAVG----KSPYLIFTNRHEVRKIDL 451
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 145/382 (37%), Gaps = 92/382 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G C ++ +C + A+ K CD DCS+ DE C F+C G C
Sbjct: 22 GKGGVKECEEDQFQCRNERSIPAIWK-CDEDDDCSDNSDEADCPKKTCAESDFTCDNGHC 80
Query: 218 IPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST- 273
IP WKCDG +C DGSDE C Q C ++ C S KCIP +W CD + DC +
Sbjct: 81 IPARWKCDGEEEC-PDGSDESEAACTKQVCPAEKISCGDSSNKCIPSSWRCDGQKDCESG 139
Query: 274 --------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+D D +DE C + QC S
Sbjct: 140 IDEAGCTPACSPNEFQCSNKTCISIIFVCDGDNDCGDGSDERKCSPLTCNPNEFQCNNS- 198
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQCVALSKF 359
CI W+CD + DC D +DE +K Y + C +E +CG+ +C+ L+
Sbjct: 199 MCISELWVCDNQPDCD-----DQSDESVEKCGYDAKALNTCAAHEFQCGNG-ECIHLNWK 252
Query: 360 CDGKPDCSNGEDEG--PFCNNKAD---CENLKC---------SHKCSPTPRGAMCFCPAG 405
CDG DC + DE P + D C + C H C A C +
Sbjct: 253 CDGDEDCKDKSDEQDCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSDEAGCVQESA 312
Query: 406 -QNPNKTQCVDAD-----------------------ECLI------DGSCDQTCTNTHLS 435
++P+K QC + EC I +G C C + +
Sbjct: 313 CESPSKFQCKSGECIDGGKVCDSHKDCRDWSDEPLKECGINECSMNNGGCSHICKDLKIG 372
Query: 436 YVCSCTEGYTLRPDGKSCTAVN 457
Y C C GY L D K+C ++
Sbjct: 373 YECECPPGYKLL-DKKTCGDID 393
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L N DL P +D
Sbjct: 510 LNSPEGLAIDWVHKNIYWTDSGNKTISVATADGSRRRTLFNR-DLSEPRAIAVDPTRRFM 568
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV NI+WP+ + +D LYW DS L+++ + +
Sbjct: 569 YWSDWGDKAKIEKAGLNGVGRRVLVADNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 628
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 629 GSNRKVL 635
>gi|390179013|ref|XP_003736780.1| GA27443, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859677|gb|EIM52853.1| GA27443, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 923
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 156/421 (37%), Gaps = 110/421 (26%)
Query: 156 VDGSHNAVL-----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
DGS A C NE +C + QC+ CDG DC + DE C+P ++
Sbjct: 58 ADGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGNSDCRDKSDEAHCKARTCSPDEY 117
Query: 211 SC--GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------------ 256
+C G G+C+P +W CD DC DGSDE N C C + + C +
Sbjct: 118 ACKNGEGQCVPLAWMCDQSKDC-SDGSDEHN-CNQTCRSDEFTCGNGRCIQKRWVCDHDD 175
Query: 257 ---------------------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
CI W+CD + DCS +
Sbjct: 176 DCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDCSDASDERSCANVTKTTTP 235
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG- 348
C + QC C+ H+WLCD + DC D D + + V C P++ +CG
Sbjct: 236 CLAHEYQCKDRITCLHHSWLCDGDRDCP--------DGDDEHTANCKNVTCRPDQFQCGD 287
Query: 349 --------------------------------------------SSNQCVALSKFCDGKP 364
QC+ALS+ CD +
Sbjct: 288 RSCIAGHLTCNGDKDCADGSDEKDCSLSLGTTKGACNATSEFDCGGGQCIALSRVCDKRK 347
Query: 365 DCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420
DC +GEDE G N+ +N C H C G C C G + +K CVD DEC
Sbjct: 348 DCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKLSGDKRTCVDIDECE 407
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTVDIRRIHL 479
G+C Q C N + C C GY P + C A + AS++ + DIR+I L
Sbjct: 408 NPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASLLLARRHDIRKIAL 463
Query: 480 N 480
+
Sbjct: 464 D 464
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 87/212 (41%), Gaps = 60/212 (28%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPH 261
A C+ QF C G CIP W+CD DC DGSDE C++ C N + +C ++CIP
Sbjct: 30 ATCSADQFRCTNGNCIPNKWRCDQENDC-ADGSDEATALCMNACPNNEFKCQTVEQCIPR 88
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDD 320
WLCD DC D +DE K C + C + +C+P W+CD+ DCS
Sbjct: 89 GWLCDGNSDCR-----DKSDEAHCKARTCSPDEYACKNGEGQCVPLAWMCDQSKDCS--- 140
Query: 321 IVDNTDEDWDKYFSHN-AVLCHPNELRCG------------------------------- 348
D +DE HN C +E CG
Sbjct: 141 --DGSDE-------HNCNQTCRSDEFTCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPC 191
Query: 349 --------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+ DE
Sbjct: 192 DAVAEHTCTNGACIAKRWVCDGDPDCSDASDE 223
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 587 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 646
Query: 167 PNEL 170
E
Sbjct: 647 STEY 650
>gi|148235080|ref|NP_001081290.1| low-density lipoprotein receptor 1 precursor [Xenopus laevis]
gi|547838|sp|Q99087.1|LDLR1_XENLA RecName: Full=Low-density lipoprotein receptor 1; Short=LDL
receptor 1; Flags: Precursor
gi|214574|gb|AAA49897.1| low density lipoprotein receptor-1 [Xenopus laevis]
Length = 909
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 154/371 (41%), Gaps = 72/371 (19%)
Query: 163 VLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C ++ CG N+C+ +S CDG+ DC NG DE + C QF+C GKCI
Sbjct: 66 VTCGTDQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTHKVCADDQFTCRSGKCISLD 125
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+ CD +DC +DGSDE C QC CIP W CD + DC D +D
Sbjct: 126 FVCDEDLDC-DDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE-----DGSD 179
Query: 282 EDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E+ + + C+ S +CI +W CD DC D +DE
Sbjct: 180 EEHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGFDCK-----DKSDEK-----DC 229
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP----------- 374
C P++ +C ++ C+ S+ CD + DC + D EGP
Sbjct: 230 VKPTCRPDQFQC-NTGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECI 288
Query: 375 ----FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAGQN-PNKT 411
CN K DC N CSH C+ G C C G ++
Sbjct: 289 TMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQK 348
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
+C D +EC +C Q C N Y C C EGY + P SC ++ A + F++
Sbjct: 349 RCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIGT----VAYLFFTNR 404
Query: 472 VDIRRIHLNGS 482
++R++ L+ S
Sbjct: 405 HEVRKMTLDRS 415
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 151/362 (41%), Gaps = 75/362 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
H++ + +R C NE +CG +C+ CDG +C + DE P E T
Sbjct: 17 HVSAISGIRK--------CDRNEFQCGDG-KCIPYKWICDGSAECKDSSDESPETCREVT 67
Query: 207 PG--QFSCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
G QFSCG + +CIP SWKCDG DC E+GSDE N C H+ C + Q C S KCI
Sbjct: 68 CGTDQFSCGGRLNRCIPMSWKCDGQTDC-ENGSDE-NDCTHKVCADDQFTCR-SGKCISL 124
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+++CDE++DC D +DE + C QC CIP W CD + DC
Sbjct: 125 DFVCDEDLDCD-----DGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE---- 175
Query: 322 VDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------- 372
D +DE+ + C P E CG S +C+ +S CDG DC + DE
Sbjct: 176 -DGSDEEHCEGREPIKTDKPCSPLEFHCG-SGECIHMSWKCDGGFDCKDKSDEKDCVKPT 233
Query: 373 ----------------GPFCNNKADCENLKCSHKCSPTP----------RGAMCFCPAGQ 406
C+ + DC++L C R C
Sbjct: 234 CRPDQFQCNTGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKV 293
Query: 407 NPNKTQCVD----------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
K C D +ECL +G C C + + Y C C EGY L D K C
Sbjct: 294 CNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV-DQKRCED 352
Query: 456 VN 457
+N
Sbjct: 353 IN 354
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT+NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ V G + +
Sbjct: 586 IDVTGENRRTV 596
>gi|224994225|ref|NP_001139329.1| low-density lipoprotein receptor-related protein 4 isoform 2
precursor [Mus musculus]
gi|148695618|gb|EDL27565.1| low density lipoprotein receptor-related protein 4, isoform CRA_b
[Mus musculus]
Length = 519
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 110/331 (33%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CDG D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCDGDDD-CGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DD DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGE-----DDCADNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALGP---EPV-LLFANRIDIRQV 453
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDC 316
+ CI +W CD + DC
Sbjct: 156 S-DGSCIAEHWYCDGDTDC 173
>gi|390179011|ref|XP_003736779.1| GA27443, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859676|gb|EIM52852.1| GA27443, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 822
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 117/384 (30%), Positives = 155/384 (40%), Gaps = 77/384 (20%)
Query: 156 VDGSHNAVL-----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
DGS A C NE +C + QC+ CDG DC + DE CN C +F
Sbjct: 58 ADGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGNSDCRDKSDEA-HCNQTCRSDEF 116
Query: 211 SCGMGKCI----------------------------------------PESWKCDGFVDC 230
+CG G+CI + W CDG DC
Sbjct: 117 TCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDC 176
Query: 231 LEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
D SDE + C + QC C+ H+WLCD + DC D DE
Sbjct: 177 -SDASDERSCANVTKTTTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTA 230
Query: 286 --KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP 342
K C Q QC + CI + C+ + DC+ D +DE D C+
Sbjct: 231 NCKNVTCRPDQFQCG-DRSCIAGHLTCNGDKDCA-----DGSDEKDCSLSLGTTKGACNA 284
Query: 343 -NELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAM 399
+E CG QC+ALS+ CD + DC +GEDE G N+ +N C H C G
Sbjct: 285 TSEFDCGG-GQCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHR 343
Query: 400 CFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAV 456
C C G + +K CVD DEC G+C Q C N + C C GY P + C A
Sbjct: 344 CECHEGYKLSGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA- 402
Query: 457 NVPQDEPASIIFSSTVDIRRIHLN 480
+ AS++ + DIR+I L+
Sbjct: 403 ---GEGHASLLLARRHDIRKIALD 423
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 47/220 (21%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPH 261
A C+ QF C G CIP W+CD DC DGSDE C++ C N + +C ++CIP
Sbjct: 30 ATCSADQFRCTNGNCIPNKWRCDQENDC-ADGSDEATALCMNACPNNEFKCQTVEQCIPR 88
Query: 262 NWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQ------------------------- 294
WLCD DC +D+ N D+F C NG+
Sbjct: 89 GWLCDGNSDCRDKSDEAHCNQTCRSDEF-TCGNGRCIQKRWVCDHDDDCGDGSDERECPV 147
Query: 295 VQC-ALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
V C A+++ CI W+CD + DCS D +DE + C +E +C
Sbjct: 148 VPCDAVAEHTCTNGACIAKRWVCDGDPDCS-----DASDERSCANVTKTTTPCLAHEYQC 202
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 203 KDRITCLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 237
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 546 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 605
Query: 167 PNEL 170
E
Sbjct: 606 STEY 609
>gi|27923331|gb|AAO27569.1| vitellogenin receptor [Oreochromis aureus]
Length = 844
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 114/362 (31%), Positives = 152/362 (41%), Gaps = 65/362 (17%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE CG+ S QC+ + CDG+ DC NGEDE N C P +F+C G+CI ++
Sbjct: 110 CRMNEFSCGAGSTQCIPVFWKCDGEKDCDNGEDEVNCGNITCAPNEFTCASGRCISRNFV 169
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW--LCDEEMDCSTDDIVDNTD 281
C+G DC DGSDE C + QC S CIP +W D + +D+ +
Sbjct: 170 CNGEDDC-GDGSDEVECAPSSCGPSEFQCGNS-SCIPASWVCDDDVDCQDQSDESPSHCG 227
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C ++QC S +CI W CD + DC D +DE + C
Sbjct: 228 RHPTPPAKCSPSEMQCR-SGECIHKKWRCDGDSDCK-----DGSDE-----ANCPVRTCG 276
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP---------------FC 376
++ +C N C+ S+ C+G DC++G DE GP C
Sbjct: 277 SDQFKCDDGN-CILGSRQCNGLRDCADGSDEANCRNMTQCNGPEKFKCRSGECIEMSKVC 335
Query: 377 NNKADC------------------ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDAD 417
N DC N CSH C G C C P Q + C D D
Sbjct: 336 NKVRDCPDWSDEPIKECNFNECLLNNGGCSHICKDMVIGYECDCTPGLQLIDHKTCGDID 395
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC+ G C Q C N Y C C G + P C AV EP +IF++ DIRR+
Sbjct: 396 ECMNPGICSQICINLKGGYKCECHNGDQMDPTTGVCKAVG---KEPC-LIFTNRRDIRRL 451
Query: 478 HL 479
L
Sbjct: 452 GL 453
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +CG+ +C+ CDG DCS+G DE C F C G+C+P+ W C
Sbjct: 30 CEANQFQCGNG-RCIPSVWQCDGDEDCSDGSDENSCVKKTCAELDFVCDNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC EDGSDE H C + C A S +CIP W CD E DC DN +
Sbjct: 89 DGEPDC-EDGSDESLDICHMRTCRMNEFSCGAGSTQCIPVFWKCDGEKDC------DNGE 141
Query: 282 EDWDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
++ + + C + CA S +CI N++C+ E DC D +DE C
Sbjct: 142 DEVNCGNITCAPNEFTCA-SGRCISRNFVCNGEDDCG-----DGSDE-----VECAPSSC 190
Query: 341 HPNELRCGSSN 351
P+E +CG+S+
Sbjct: 191 GPSEFQCGNSS 201
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 26/165 (15%)
Query: 14 LSKKCIPHNWLCDEEMDCST-DDIVDNTDE------DW---DKYFKRILNGTHTLAL-EF 62
L +K I ++ L D+ +D T ++DN DW + Y+ + GT T+++ F
Sbjct: 485 LGQKAI-YSTLLDKRVDVGTHKKVIDNVQTPVGIAVDWIYKNLYWSDL--GTKTISVASF 541
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSP 120
N Q + F + + ++ L + W PA ++EK+GM+G +R
Sbjct: 542 NGTKQKVLFNRGLK-EPADIAVDPLSGFLYWSDWGEPA--------KIEKSGMNGVDRQV 592
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVL 164
LV +IQWP+ + +D + LYW DS L+ + SV ++G + N VL
Sbjct: 593 LVATDIQWPNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRNKVL 637
>gi|324500824|gb|ADY40376.1| Low-density lipoprotein receptor-related protein 1B, partial [Ascaris
suum]
Length = 1566
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 33/331 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-QFSCGMG-KCIPESW 222
C + RC + +C+A S CDG DC +G DE C+ C PG +F CG G C+ +
Sbjct: 1040 CGVAQFRC-LNGKCIAASYVCDGAADCRDGSDE-RHCHQGCLPGLEFRCGPGLPCLSATL 1097
Query: 223 KCDGFVDCLEDGSDEPN-TCI-----HQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CDG VDC +DGSDE N TC H+C + Q +C S +CI ++ CD + DC
Sbjct: 1098 LCDGVVDC-DDGSDESNETCPRPLKHHECPSVNQFKCVGSDQCIRKSFRCDGQRDC---- 1152
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYF 333
D +DE D + CA +CIP + CD DC D +DE D
Sbjct: 1153 -FDGSDEKDCGNLTCASPNEYLCADKSRCIPTKFRCDGHRDCE-----DGSDEKDCAPRR 1206
Query: 334 SHNAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
+ NA C C + N C+ CD DC G+DEG C+ + E+L C C
Sbjct: 1207 TVNAGRCLSPYFLCSNDPRNTCLPPEAVCDHIVDCPMGDDEGFLCDERMCSESL-CEQLC 1265
Query: 392 SPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P G +C C G + +C+ + C G+C Q C + C C G+ L D
Sbjct: 1266 YERPSGYICACREGFMLAEDNRRCIKQNPCTF-GACGQLCWAQGSTRYCHCEPGFELLDD 1324
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+C + + PA II+S+ +IR + ++
Sbjct: 1325 KFTCESTD---PAPAKIIYSNRHEIRLVTID 1352
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 18/219 (8%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC---TPGQFSCGMGK 216
NA C +E C + +C+ CDG DC +G DEG A+ +PGQF C +
Sbjct: 905 RNASRCGSSEFECLRNKKCIGRGYLCDGDDDCGDGSDEGEVACADFKCPSPGQFKCKSNQ 964
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CI +SW CDG DC ++ C + C + +C+ S+KC+P + CD E DC
Sbjct: 965 CIEQSWVCDGDPDCSTQDDEDEELCRGKSTCRGKKFECSKSRKCLPLSMKCDGEYDCGEG 1024
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D D + + +C Q +C L+ KCI +++CD DC D +DE
Sbjct: 1025 DQSDEEGCESSQRDECGVAQFRC-LNGKCIAASYVCDGAADCR-----DGSDE------R 1072
Query: 335 HNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H C P E RCG C++ + CDG DC +G DE
Sbjct: 1073 HCHQGCLPGLEFRCGPGLPCLSATLLCDGVVDCDDGSDE 1111
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 129/328 (39%), Gaps = 72/328 (21%)
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
D P+ ++E+ + G R L++K+I WP+ L +D++ + LYWCD++ + +E +
Sbjct: 718 DAPSTRGLGAGAKIERTKLDGSERKVLISKDIHWPNGLAVDHDNEWLYWCDAYYDRIERI 777
Query: 155 RVDGSHNAV------LCHPNELRCGSSNQCVALSKFCDGK-------------------- 188
+G V L HP L S + S+F D +
Sbjct: 778 HFNGIDRQVVIDGDALNHPYGLAVYGS--FIFWSEFLDSEIRRIRVGENGLIGRSRIVYS 835
Query: 189 -------------------PDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
CSN FC A G C +C+ DGF
Sbjct: 836 DKSSLFELHVFDPNSHTQTTACSNSNGGCEHFCFAFACKGSLGCEPVRCLC----ADGFS 891
Query: 229 DCLEDGSDEPNTCI------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D SD+ CI +C + + +C +KKCI +LCD + D D +
Sbjct: 892 ---VDPSDK-KKCIADPRNASRCGSSEFECLRNKKCIGRGYLCDGDD--DCGDGSDEGEV 945
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
F GQ +C S +CI +W+CD + DCST D D D+ C
Sbjct: 946 ACADFKCPSPGQFKCK-SNQCIEQSWVCDGDPDCSTQD-------DEDEELCRGKSTCRG 997
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGE 370
+ C S +C+ LS CDG+ DC G+
Sbjct: 998 KKFECSKSRKCLPLSMKCDGEYDCGEGD 1025
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 20/169 (11%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C GQ C KCIP ++CD + DC D++DE D + +C E C S
Sbjct: 43 CSTGQHSCH-DGKCIPIKYVCDGDFDCD-----DHSDESPD--CRNTTRVCPAGEHMCAS 94
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT-PRGAMCFCPAGQNP 408
QCV LSKFCDG DC++G DE C +++ C + + T +G C+CP GQ P
Sbjct: 95 GGQCVHLSKFCDGYRDCADGSDEHARCGVPPSPDDVTCKYGGAMTFDKGMQCYCPPGQEP 154
Query: 409 NKTQCVDADECL---IDG--SCDQTCTNTHL------SYVCSCTEGYTL 446
++C D DEC G C Q C N Y C+C + L
Sbjct: 155 RGSECEDEDECKRVEFGGVPVCAQICVNLIAKRAGDQKYRCACAPEFEL 203
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 29/55 (52%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+C E C S QCV LSKFCDG DC++G DE C +P +C G +
Sbjct: 84 VCPAGEHMCASGGQCVHLSKFCDGYRDCADGSDEHARCGVPPSPDDVTCKYGGAM 138
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSKKC 258
+ C+ GQ SC GKCIP + CDG DC +D SDE C C G+ CA +C
Sbjct: 40 TSNCSTGQHSCHDGKCIPIKYVCDGDFDC-DDHSDESPDCRNTTRVCPAGEHMCASGGQC 98
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDE 282
+ + CD DC+ D +DE
Sbjct: 99 VHLSKFCDGYRDCA-----DGSDE 117
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 11/72 (15%)
Query: 107 RLEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS--- 159
R+E+A M G++R L N WP+ L D++ + LYW D+ +++ ++ +G
Sbjct: 1482 RIERATMAGQDRKVLFRVLEIVNGGWPNGLTCDFSVERLYWIDAKSDSIHTITYEGGDHR 1541
Query: 160 ----HNAVLCHP 167
NA L HP
Sbjct: 1542 EIVRDNAHLAHP 1553
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGM-GKCIPESWKCDGFVDCL 231
+C+ + CDG DC + DE P C C G+ C G+C+ S CDG+ DC
Sbjct: 53 GKCIPIKYVCDGDFDCDDHSDESPDCRNTTRVCPAGEHMCASGGQCVHLSKFCDGYRDC- 111
Query: 232 EDGSDEPNTC 241
DGSDE C
Sbjct: 112 ADGSDEHARC 121
>gi|195112156|ref|XP_002000642.1| GI10347 [Drosophila mojavensis]
gi|193917236|gb|EDW16103.1| GI10347 [Drosophila mojavensis]
Length = 1070
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 140/346 (40%), Gaps = 66/346 (19%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPES 221
+C+ RC + QC+ S CDG PDC +G DE + C+P +F+C G G+CIP +
Sbjct: 269 VCNHFTFRCHNGEQCLPRSWICDGDPDCRDGSDELECKSKTCSPDEFACKSGEGECIPLA 328
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC DGSDE TC C + + C S +CI W+CD++ DC D +D
Sbjct: 329 WMCDQSKDC-SDGSDEA-TCNITCRSDEFTCNNS-RCIQKRWVCDQDNDCG-----DGSD 380
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E +C + CI W+CD E DC D DE S C
Sbjct: 381 ELACPKVECPKNTSFSCSNGACITRAWVCDGEEDCE-----DGGDERGCGTVSQTITPCQ 435
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------------FC 376
PNE +C C+ S CDG DC +G+DE C
Sbjct: 436 PNEFQCKDRITCLHQSWVCDGDRDCPDGDDEHASSCKNVTCRPDQFLCDDLSCIAGHLTC 495
Query: 377 NNKADCENLKCSHKCSPTPR-------------GAMCF-----------CPAGQNPNKTQ 412
N + DC + C + G C CP G++ +
Sbjct: 496 NGQRDCRDGSDERDCRVSAELKRCNATSQFDCGGGQCIALSQVCDRRKDCPDGEDEPANK 555
Query: 413 CVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C +EC + +G C C + + Y C C GY L DG C +N
Sbjct: 556 C-GINECEVRNGGCMHRCVDQPVGYRCECHAGYKLTSDGHHCMDIN 600
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 148/373 (39%), Gaps = 79/373 (21%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P+E C S +C+ L+ CD DCS+G DE CN C +F+C +CI + W
Sbjct: 310 CSPDEFACKSGEGECIPLAWMCDQSKDCSDGSDEAT-CNITCRSDEFTCNNSRCIQKRWV 368
Query: 224 CDGFVDCLEDGSDE--------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CD DC DGSDE P C NG CI W+CD E DC
Sbjct: 369 CDQDNDC-GDGSDELACPKVECPKNTSFSCSNG--------ACITRAWVCDGEEDCEDGG 419
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
C + QC C+ +W+CD + DC D D + S
Sbjct: 420 DERGCGTVSQTITPCQPNEFQCKDRITCLHQSWVCDGDRDCP--------DGDDEHASSC 471
Query: 336 NAVLCHPNEL------------------------------------RCGSSNQ------- 352
V C P++ RC +++Q
Sbjct: 472 KNVTCRPDQFLCDDLSCIAGHLTCNGQRDCRDGSDERDCRVSAELKRCNATSQFDCGGGQ 531
Query: 353 CVALSKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQ--NP 408
C+ALS+ CD + DC +GEDE C N+ + N C H+C P G C C AG
Sbjct: 532 CIALSQVCDRRKDCPDGEDEPANKCGINECEVRNGGCMHRCVDQPVGYRCECHAGYKLTS 591
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASII 467
+ C+D +EC G C Q C N + C C GY ++ C A + AS++
Sbjct: 592 DGHHCMDINECEEPGVCSQICVNEVGGFKCECEAGYMRDSHNRTRCKAT----EGHASLL 647
Query: 468 FSSTVDIRRIHLN 480
+ DIR+I L+
Sbjct: 648 LARRHDIRKIALD 660
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 104/215 (48%), Gaps = 24/215 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + C S +C+ + CDG+ DC + DE F + C QF C GKCIP
Sbjct: 185 YCDEKQFHCKQSGECIPIRFVCDGEIDCKDHSDELIEQCKFKESTCGIEQFRCNNGKCIP 244
Query: 220 ESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W+CD DC DGSDE P C++ C + +C ++C+P +W+CD + DC D
Sbjct: 245 NKWRCDRESDC-ADGSDEAPGLCMNVCNHFTFRCHNGEQCLPRSWICDGDPDCR-----D 298
Query: 279 NTDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE K C + C + +CIP W+CD+ DCS D +DE +
Sbjct: 299 GSDELECKSKTCSPDEFACKSGEGECIPLAWMCDQSKDCS-----DGSDE------ATCN 347
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E C +S +C+ CD DC +G DE
Sbjct: 348 ITCRSDEFTCNNS-RCIQKRWVCDQDNDCGDGSDE 381
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK- 301
H C Q C S +CIP ++CD E+DC D++DE QC + C + +
Sbjct: 184 HYCDEKQFHCKQSGECIPIRFVCDGEIDCK-----DHSDE---LIEQCKFKESTCGIEQF 235
Query: 302 -----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
KCIP+ W CD E DC+ D +DE + +C+ RC + QC+
Sbjct: 236 RCNNGKCIPNKWRCDRESDCA-----DGSDEAPGLCMN----VCNHFTFRCHNGEQCLPR 286
Query: 357 SKFCDGKPDCSNGEDE 372
S CDG PDC +G DE
Sbjct: 287 SWICDGDPDCRDGSDE 302
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 783 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNIISSANYDGSQRRQILY 842
Query: 167 PNEL 170
E
Sbjct: 843 STEY 846
>gi|410045106|ref|XP_508403.4| PREDICTED: low-density lipoprotein receptor-related protein 4 [Pan
troglodytes]
Length = 2048
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 291 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPVPPCNLE----EFQCAYGR 345
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 346 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 400
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 401 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 450
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 451 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 509
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 510 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 569
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 570 RPDRRSCKALG---PEPV-LLFANRIDIRQV 596
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 187 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 245
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 246 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 298
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 299 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 323
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 71/159 (44%), Gaps = 26/159 (16%)
Query: 35 DIVDNTD---EDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQI 87
D++ D + + R L T LA+++ RN + + + RL R I
Sbjct: 1550 DVIRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLI 1609
Query: 88 NDLLNSWDLP-APEIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N NS D P A +FP ++E+A + G R L+ ++ WP+ L +D
Sbjct: 1610 N---NSLDEPRAIAVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLD 1666
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC----HPNEL 170
Y+ +YW D+HL+ +ES ++G VL HP L
Sbjct: 1667 YDTRRIYWVDAHLDRIESADLNGKLRQVLVSHVSHPFAL 1705
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 1026 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 1083
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1334 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1393
Query: 167 P 167
P
Sbjct: 1394 P 1394
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 633 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 692
Query: 166 HPN 168
N
Sbjct: 693 WQN 695
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 721 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 778
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 940 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 999
Query: 168 N 168
N
Sbjct: 1000 N 1000
>gi|390179015|ref|XP_003736781.1| GA27443, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388859678|gb|EIM52854.1| GA27443, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 1005
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 155/375 (41%), Gaps = 73/375 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A C P+E C + QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 190 KARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQ 248
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDEPN 239
+ W CDG DC D SDE +
Sbjct: 249 KRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDC-SDASDERS 307
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + QC C+ H+WLCD + DC D DE K C
Sbjct: 308 CANVTKTTTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRP 362
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP-NELRCGSS 350
Q QC + CI + C+ + DC+ D +DE D C+ +E CG
Sbjct: 363 DQFQCG-DRSCIAGHLTCNGDKDCA-----DGSDEKDCSLSLGTTKGACNATSEFDCGG- 415
Query: 351 NQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-- 406
QC+ALS+ CD + DC +GEDE G N+ +N C H C G C C G
Sbjct: 416 GQCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKL 475
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPAS 465
+ +K CVD DEC G+C Q C N + C C GY P + C A + AS
Sbjct: 476 SGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHAS 531
Query: 466 IIFSSTVDIRRIHLN 480
++ + DIR+I L+
Sbjct: 532 LLLARRHDIRKIALD 546
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 110/265 (41%), Gaps = 80/265 (30%)
Query: 180 ALSKFCDGKPDCS--------NGEDEGPF-CNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
+LS+ DGK + +G+ P A C+ QF C G CIP W+CD DC
Sbjct: 119 SLSRLLDGKTFINMSFKFLNVSGKIGTPLGIEATCSADQFRCTNGNCIPNKWRCDQENDC 178
Query: 231 LEDGSDE------PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DGSDE TC + C NG+ Q C+P W+CD+ DCS D +D
Sbjct: 179 -ADGSDEATALCKARTCSPDEYACKNGEGQ------CVPLAWMCDQSKDCS-----DGSD 226
Query: 282 E-------DWDKFHQCFNGQ-------------------------VQC-ALSK------K 302
E D+F C NG+ V C A+++
Sbjct: 227 EHNCNQTCRSDEF-TCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGA 285
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CI W+CD + DCS D +DE + C +E +C C+ S CDG
Sbjct: 286 CIAKRWVCDGDPDCS-----DASDERSCANVTKTTTPCLAHEYQCKDRITCLHHSWLCDG 340
Query: 363 KPDCSNGEDEGPFCNNKADCENLKC 387
DC +G+DE + A+C+N+ C
Sbjct: 341 DRDCPDGDDE-----HTANCKNVTC 360
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 669 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 728
Query: 167 PNE 169
E
Sbjct: 729 STE 731
>gi|330369976|gb|AEC12211.1| vitellogenin receptor isoform 1 [Thunnus thynnus]
Length = 864
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 151/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C PNE C S + ++ + C+G+ DC +G DE + C P +F CG CIP SW
Sbjct: 149 ITCAPNEFTCASGRR-ISRNFVCNGEDDCGDGSDEVECAPSSCGPSEFQCGKSSCIPASW 207
Query: 223 KCDGFVDCLEDGSDEPNTCIH------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P+ C +C + ++QC S +CI W CD + DC
Sbjct: 208 VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDPDCK---- 262
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE C Q +C CI + C+ DC+ D +DE N
Sbjct: 263 -DGSDEANCPMRTCGPDQFKCD-DGNCILGSRQCNGVRDCT-----DGSDE----VNCKN 311
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C+ P + +C S +C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 312 MTQCNGPEKFKC-RSGECIEMSKVCNKARDCPDWSDE-PIKECNINECLLNNGGCSHICK 369
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q + C D +ECL G C Q C N Y C C GY + P
Sbjct: 370 DMAIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTG 429
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIRR+ L
Sbjct: 430 VCKAVG---KEPC-LIFTNRRDIRRLGL 453
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 143/377 (37%), Gaps = 95/377 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +CG+ +C+ CDG DC++G DE C F C G+C+P+ W C
Sbjct: 30 CETNQFQCGNG-RCIPSVWQCDGDEDCTDGSDENSCVKKTCAEEDFVCRNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE H C + C A S +CIP W CD E DC +
Sbjct: 89 DGEPDC-EDGSDESVEICHMRTCRVNEFSCGAGSTQCIPVFWKCDGEKDCDSGEDEVNCG 147
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 148 NITCAPNEFTCASGRRISRNFVCNGEDDCGDGSDEVECAPSSCGPSEFQCGKS-SCIPAS 206
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W + D D +DE H C +E++C S +C+ CDG PD
Sbjct: 207 W-----VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQC-RSGECIHKKWRCDGDPD 260
Query: 366 CSNGEDE--------GP---------------FCNNKADCE------NLKCSHKCSPTP- 395
C +G DE GP CN DC N K +C+
Sbjct: 261 CKDGSDEANCPMRTCGPDQFKCDDGNCILGSRQCNGVRDCTDGSDEVNCKNMTQCNGPEK 320
Query: 396 ---RGAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSC 440
R C CP + +C + +ECL+ +G C C + + + C C
Sbjct: 321 FKCRSGECIEMSKVCNKARDCPDWSDEPIKEC-NINECLLNNGGCSHICKDMAIGFECDC 379
Query: 441 TEGYTLRPDGKSCTAVN 457
T G L D K+C +N
Sbjct: 380 TPGLQLI-DHKTCGDIN 395
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 14 LSKKCIPHNWLCDEEMDCST-DDIVDNTDE------DW---DKYFKRILNGTHTLALEFN 63
L +K I ++ + D+ D T + ++DN DW + Y+ + T ++A FN
Sbjct: 485 LGQKAI-YSTVLDKRGDVGTHNKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVA-NFN 542
Query: 64 HRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
Q + F + + +++ + + W PA ++EK+GM+G +R LV
Sbjct: 543 GTKQKVLFNRSLKEPAAIAVDPLSGFLYWSDWGEPA--------KIEKSGMNGVDRQVLV 594
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VLCHPNEL 170
+IQWP+ + +D + LYW DS L+ V S+ ++G + L HP L
Sbjct: 595 ATDIQWPNGITLDLIKGRLYWVDSKLHMVCSIDLNGDNRKKVLQSSDYLAHPFAL 649
>gi|330369974|gb|AEC12210.1| vitellogenin receptor isoform 2 [Thunnus thynnus]
Length = 844
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/328 (33%), Positives = 151/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C PNE C S + ++ + C+G+ DC +G DE + C P +F CG CIP SW
Sbjct: 149 ITCAPNEFTCASGRR-ISRNFVCNGEDDCGDGSDEVECAPSSCGPSEFQCGKSSCIPASW 207
Query: 223 KCDGFVDCLEDGSDEPNTCIH------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P+ C +C + ++QC S +CI W CD + DC
Sbjct: 208 VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQCR-SGECIHKKWRCDGDPDCK---- 262
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE C Q +C CI + C+ DC+ D +DE N
Sbjct: 263 -DGSDEANCPMRTCGPDQFKCD-DGNCILGSRQCNGVRDCT-----DGSDE----VNCKN 311
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C+ P + +C S +C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 312 MTQCNGPEKFKC-RSGECIEMSKVCNKARDCPDWSDE-PIKECNINECLLNNGGCSHICK 369
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q + C D +ECL G C Q C N Y C C GY + P
Sbjct: 370 DMAIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHNGYQMDPTTG 429
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIRR+ L
Sbjct: 430 VCKAVG---KEPC-LIFTNRRDIRRLGL 453
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 143/377 (37%), Gaps = 95/377 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ +CG+ +C+ CDG DC++G DE C F C G+C+P+ W C
Sbjct: 30 CETNQFQCGNG-RCIPSVWQCDGDEDCTDGSDENSCVKKTCAEEDFVCRNGQCVPKRWHC 88
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE H C + C A S +CIP W CD E DC +
Sbjct: 89 DGEPDC-EDGSDESVEICHMRTCRVNEFSCGAGSTQCIPVFWKCDGEKDCDSGEDEVNCG 147
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 148 NITCAPNEFTCASGRRISRNFVCNGEDDCGDGSDEVECAPSSCGPSEFQCGKS-SCIPAS 206
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W + D D +DE H C +E++C S +C+ CDG PD
Sbjct: 207 W-----VCDDDVDCQDQSDESPSHCGRHPTPPAKCSSSEMQC-RSGECIHKKWRCDGDPD 260
Query: 366 CSNGEDE--------GP---------------FCNNKADCE------NLKCSHKCSPTP- 395
C +G DE GP CN DC N K +C+
Sbjct: 261 CKDGSDEANCPMRTCGPDQFKCDDGNCILGSRQCNGVRDCTDGSDEVNCKNMTQCNGPEK 320
Query: 396 ---RGAMCF-----------CPAGQNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSC 440
R C CP + +C + +ECL+ +G C C + + + C C
Sbjct: 321 FKCRSGECIEMSKVCNKARDCPDWSDEPIKEC-NINECLLNNGGCSHICKDMAIGFECDC 379
Query: 441 TEGYTLRPDGKSCTAVN 457
T G L D K+C +N
Sbjct: 380 TPGLQL-IDHKTCGDIN 395
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 82/175 (46%), Gaps = 28/175 (16%)
Query: 14 LSKKCIPHNWLCDEEMDCST-DDIVDNTDE------DW---DKYFKRILNGTHTLALEFN 63
L +K I ++ + D+ D T + ++DN DW + Y+ + T ++A FN
Sbjct: 485 LGQKAI-YSTVLDKRGDVGTHNKVIDNVQTPVGIAVDWIYKNLYWSDLSTKTISVA-NFN 542
Query: 64 HRNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
Q + F + + +++ + + W PA ++EK+GM+G +R LV
Sbjct: 543 GTKQKVLFNRSLKEPAAIAVDPLSGFLYWSDWGEPA--------KIEKSGMNGVDRQVLV 594
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VLCHPNEL 170
+IQWP+ + +D + LYW DS L+ V S+ ++G + L HP L
Sbjct: 595 ATDIQWPNGITLDLIKGRLYWVDSKLHMVCSIDLNGDNRKKVLQSSDYLAHPFAL 649
>gi|195153012|ref|XP_002017426.1| GL22297 [Drosophila persimilis]
gi|194112483|gb|EDW34526.1| GL22297 [Drosophila persimilis]
Length = 1096
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 155/375 (41%), Gaps = 73/375 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A C P+E C + QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 276 KARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQ 334
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDEPN 239
+ W CDG DC D SDE +
Sbjct: 335 KRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDC-SDASDERS 393
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + QC C+ H+WLCD + DC D DE K C
Sbjct: 394 CANVTKTTTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRP 448
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP-NELRCGSS 350
Q QC + CI + C+ + DC+ D +DE D C+ +E CG
Sbjct: 449 DQFQCG-DRSCIAGHLTCNGDKDCA-----DGSDEKDCSLSLGTTKGACNATSEFDCGG- 501
Query: 351 NQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-- 406
QC+ALS+ CD + DC +GEDE G N+ +N C H C G C C G
Sbjct: 502 GQCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKL 561
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPAS 465
+ +K CVD DEC G+C Q C N + C C GY P + C A + AS
Sbjct: 562 SGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHAS 617
Query: 466 IIFSSTVDIRRIHLN 480
++ + DIR+I L+
Sbjct: 618 LLLARRHDIRKIALD 632
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 105/254 (41%), Gaps = 65/254 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C + + C+ + CDG DC + DE F A C+ QF C G CIP
Sbjct: 157 CDEKQFQCRNGD-CIPIRFVCDGDADCKDHSDEQVTECKFLEATCSADQFRCTNGNCIPN 215
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC DGSDE C++ C N + +C ++CIP WLCD DC D
Sbjct: 216 KWRCDQENDC-ADGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGNSDCR-----DK 269
Query: 280 TDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-A 337
+DE K C + C + +C+P W+CD+ DCS D +DE HN
Sbjct: 270 SDEAHCKARTCSPDEYACKNGEGQCVPLAWMCDQSKDCS-----DGSDE-------HNCN 317
Query: 338 VLCHPNELRCG---------------------------------------SSNQCVALSK 358
C +E CG ++ C+A
Sbjct: 318 QTCRSDEFTCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRW 377
Query: 359 FCDGKPDCSNGEDE 372
CDG PDCS+ DE
Sbjct: 378 VCDGDPDCSDASDE 391
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C Q +C
Sbjct: 150 GQALEAKCDEKQFQCRNGDCIPIRFVCDGDADCKDHSDEQVTECKFLEATCSADQFRCT- 208
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ CIP+ W CD+E DC+ D +DE + C N + +C ++CIP WLCD
Sbjct: 209 NGNCIPNKWRCDQENDCA-----DGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGN 263
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDE 372
DC D +DE K A C P+E C + QCV L+ CD DCS+G DE
Sbjct: 264 SDCR-----DKSDEAHCK-----ARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDE 313
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 755 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 814
Query: 167 PNE 169
E
Sbjct: 815 STE 817
>gi|195567006|ref|XP_002107066.1| GD17251 [Drosophila simulans]
gi|194204463|gb|EDX18039.1| GD17251 [Drosophila simulans]
Length = 1704
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 284 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 342
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 343 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 397
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 398 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSLGSEHPLTCGSDEF 452
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 453 TC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 511
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 512 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNCTDID 571
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 572 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 627
Query: 476 RIHLN 480
R+ L+
Sbjct: 628 RVTLS 632
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ +YW D+ + +E +DGS N +L
Sbjct: 754 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILS 813
Query: 166 ----HPNEL 170
HP L
Sbjct: 814 THLPHPFAL 822
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1371 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1430
Query: 164 --LCHPNELRCGSSN 176
L HP L N
Sbjct: 1431 SSLHHPYALALSDDN 1445
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1066 DPMIERANMDGRERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1125
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1126 LNGLGHPFGL 1135
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1329 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1388
Query: 167 PN 168
N
Sbjct: 1389 AN 1390
>gi|350412227|ref|XP_003489577.1| PREDICTED: vitellogenin receptor-like [Bombus impatiens]
Length = 1668
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 142/316 (44%), Gaps = 34/316 (10%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ + CDG+ DC +G DE C P + F+C G+CI KC+G +C EDGSD
Sbjct: 946 CIPKTWKCDGEADCPDGSDESETCQRNACPTEMFTCSNGRCIDLMLKCNGISEC-EDGSD 1004
Query: 237 EP------NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
E N C Q +C ++ C+P C+ DC +D N + + C
Sbjct: 1005 EQYCKDTGNRNYVNCTVDQYKCFNTELCLPKQVRCNGVTDCPKNDDERNCPRCQKEEYVC 1064
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----WDKYFSHNAVLCHPNELR 346
N +KCI +W+CD DC D +DE + S + E +
Sbjct: 1065 DN--------QKCIDKSWVCDRINDCG-----DGSDEKDCDGGNSKISGISTNFICKEFK 1111
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
C S+ C+ + CDGK DCS+ DE C N C++ C TP G +C C G
Sbjct: 1112 C-SNGACLPFANVCDGKVDCSDRSDEFGQCATACTKYN-PCTNMCHKTPIGPVCGCRNGY 1169
Query: 407 NPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ C D DEC + C Q C NT+ S+ CSC EGY +R D SC +
Sbjct: 1170 QLSNDFKSCEDIDECK-NNVCSQVCYNTNGSFTCSCHEGYVIRSDKISCKVAGSQME--- 1225
Query: 465 SIIFSSTVDIRRIHLN 480
II S+ DIR++ N
Sbjct: 1226 -IITVSSADIRKLSPN 1240
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD--------IV 322
T +V T++++D + N CI + W+CD DC +D+ V
Sbjct: 11 TKRVVKATNDEYDGCVKDVNCDAFKCKDGHCIRNEWVCDGIPDCPDKSDEEKCENYMIPV 70
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD- 381
D + ++D+Y N +C++L+ C+ K +C + DE KAD
Sbjct: 71 DECNNEYDRYLCKNK--------------RCISLNATCNEKDNCGDNSDEDIDACIKADA 116
Query: 382 -CENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C+ KC H C TP GA C C G N+T C D +EC G CDQ C N+ SY C
Sbjct: 117 SCKEAKCQHNCRKTPEGAQCSCRPGYKLVNNQTSCEDVNECNNYGICDQECINSVGSYTC 176
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC GY+L D ++C + ++FS +IR I+LN
Sbjct: 177 SCQPGYSLNDDKRTCQT----EGGEGLMMFSIKSEIRGIYLN 214
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 112/238 (47%), Gaps = 27/238 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECT-PGQFSCGMGKCIP 219
C+ E++CG + C+ + CDG DC NGEDE C+ + C QF C G CI
Sbjct: 811 CNAGEIKCGEHDICIKSHQRCDGIQDCPNGEDESSICDEHHWSRCKHEDQFQCKNGDCIS 870
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
++ +C+ DC+ D SDE +C + + QC CI +C+ + DC+ D
Sbjct: 871 KTKRCNSHYDCV-DRSDEEGCDKKECDSNEFQCH-EGACISKYLVCNGQSDCT-----DF 923
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H+C C + CIP W CD E DC D +DE + NA
Sbjct: 924 SDELNCDKHKCDGDAFACEIG-TCIPKTWKCDGEADCP-----DGSDE--SETCQRNAC- 974
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS---HKCSPT 394
P E+ S+ +C+ L C+G +C +G DE +C + + + C+ +KC T
Sbjct: 975 --PTEMFTCSNGRCIDLMLKCNGISECEDGSDE-QYCKDTGNRNYVNCTVDQYKCFNT 1029
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
LL S + + +D + +AGM G+N + LV+K+++ P+SL IDY + LYW D+
Sbjct: 319 LLPSSGIMYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAK 378
Query: 150 TVESVRVDGS-HNAVL 164
+ESVR+DG+ A+L
Sbjct: 379 VIESVRLDGTDRKAIL 394
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
S+D P EI+ ++ G N + +V +++ +L IDY + LYW D+ +E
Sbjct: 1362 SYDRPMTEIY-------RSNTMGTNITAIVHRDLGIVFALTIDYTRSRLYWSDTFHKNIE 1414
Query: 153 SVRVDGSHNAVL 164
S +DGS+ ++
Sbjct: 1415 SSNLDGSNRIIV 1426
>gi|332259826|ref|XP_003278984.1| PREDICTED: low-density lipoprotein receptor-related protein 4
[Nomascus leucogenys]
Length = 1946
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 153/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G
Sbjct: 189 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGH 243
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 244 CILDIYHCD-GDDDCGDWSDESDCASHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 298
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 299 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 348
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 349 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 407
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 408 QKCQMVRGVVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 467
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 468 RPDRRSCKALG---PEPV-LLFANRIDIRQV 494
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 85 CIPAQWQCDGDNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 143
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 144 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 196
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 197 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 221
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1461 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1517
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1518 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1577
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1578 DRIESADLNGKLRQVLVSHVSHPFAL 1603
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 924 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 981
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1232 KLERSGMDGSDRAVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEAADLNGANRHTLVS 1291
Query: 167 P 167
P
Sbjct: 1292 P 1292
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 531 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 590
Query: 166 HPN 168
N
Sbjct: 591 WQN 593
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 619 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 676
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1450 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1506
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 838 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 897
Query: 168 N 168
N
Sbjct: 898 N 898
>gi|139002291|dbj|BAF51965.1| lipophorin receptor [Bombyx mori]
Length = 891
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 153/374 (40%), Gaps = 83/374 (22%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C G +CV L+ CD PDCS+G DE CN C +F+CG GKCI
Sbjct: 116 CGPEEFTCRGKPGECVPLAWMCDDNPDCSDGSDEKA-CNETCRSDEFTCGNGKCIQMRWV 174
Query: 219 ----------------------PES-------------WKCDGFVDCLEDGSDEPNTCIH 243
P+S W CDG VDC DGSDE C+
Sbjct: 175 CDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCISAWWHCDGDVDCA-DGSDEVG-CVS 232
Query: 244 Q------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C + + +C C+ W+CD + DC D DE C G V C
Sbjct: 233 TPKVRSPCISTEFECNDRITCVHRAWVCDGDHDCP-----DGGDE---ALELC-RGNVTC 283
Query: 298 ALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
L + CIP C+ DC D +DE + +C E CG
Sbjct: 284 RLDQFQCKDHSCIPGALYCNGVKDCP-----DGSDE---YNCTRQKTICDKRTEFDCGGG 335
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN- 407
C+ LSK CD DC N EDE + +CE N CS +C TP G C C G
Sbjct: 336 -MCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYYCDCEKGYKL 394
Query: 408 -PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
N+T C D EC GSC Q C N ++ C C GY P + T + P S+
Sbjct: 395 IDNRT-CEDIGECADPGSCSQICINEKGTFKCECHTGYARDPRDR--TRCKATEGHP-SL 450
Query: 467 IFSSTVDIRRIHLN 480
+F+ DIR+I L+
Sbjct: 451 LFARKHDIRKISLD 464
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 138/369 (37%), Gaps = 94/369 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + +C ++ +C+ ++ C+G DC + DE E CT +F C G+CIP S
Sbjct: 33 CPMKQFQC-ANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCKTGRCIPLS 91
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCS--TDDIV 277
WKCD DC + ++P C + C + C +C+P W+CD+ DCS +D+
Sbjct: 92 WKCDNEKDCSDSSDEDPTVCKVEACGPEEFTCRGKPGECVPLAWMCDDNPDCSDGSDEKA 151
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCALSK------------KCIP 305
N D+F C NG +V+C +CI
Sbjct: 152 CNETCRSDEF-TCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCIS 210
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W CD ++DC+ D +DE C E C CV + CDG D
Sbjct: 211 AWWHCDGDVDCA-----DGSDEVGCVSTPKVRSPCISTEFECNDRITCVHRAWVCDGDHD 265
Query: 366 CSNGEDE--------------------------GPFCNNKADCENLKCSHKCSPTPR--- 396
C +G DE +CN DC + + C+
Sbjct: 266 CPDGGDEALELCRGNVTCRLDQFQCKDHSCIPGALYCNGVKDCPDGSDEYNCTRQKTICD 325
Query: 397 --------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
G MC CP ++ + +C + + +G C Q C +T + Y
Sbjct: 326 KRTEFDCGGGMCIPLSKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIGYY 385
Query: 438 CSCTEGYTL 446
C C +GY L
Sbjct: 386 CDCEKGYKL 394
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 39/204 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCI 259
N C QF C GKCIP +W C+G DC ++ + C C + + +C + +CI
Sbjct: 30 NGACPMKQFQCANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCK-TGRCI 88
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 316
P +W CD E DCS D++DED K C + C +C+P W+CD+ DC
Sbjct: 89 PLSWKCDNEKDCS-----DSSDEDPTVCKVEACGPEEFTCRGKPGECVPLAWMCDDNPDC 143
Query: 317 S--TDDIVDNTDEDWDKYFSHNAV--------------------------LCHPNELRCG 348
S +D+ N D++ N C P
Sbjct: 144 SDGSDEKACNETCRSDEFTCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSC 203
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ CDG DC++G DE
Sbjct: 204 TDGQCISAWWHCDGDVDCADGSDE 227
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +RS +V+ +++WP+ L +D + +YW D+ +NT+ S DGS ++ H
Sbjct: 587 KIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTISSCNYDGSGRRLILH 646
Query: 167 PNEL 170
E+
Sbjct: 647 STEV 650
>gi|332853027|ref|XP_003316162.1| PREDICTED: low-density lipoprotein receptor [Pan troglodytes]
Length = 682
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 133/292 (45%), Gaps = 28/292 (9%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQCA-L 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + QC+ CI + CD E
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPVATCRPDEFQCS-DGNCIHGSRQCDREY 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE N LC PN+ +C S +C+ L K C+ DC + DE
Sbjct: 133 DCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEP 182
Query: 374 PFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCT 430
+C N CSH C+ G C CP G Q + +C D DEC +C Q C
Sbjct: 183 IKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCV 242
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 243 NLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 290
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 409 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 460
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 461 IDVNGGNRKTVLEDEKRLAHPFSL 484
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE A C P +F C G CI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPVATCRPDEFQCSDGNCIHG 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDC 271
S +CD DC +D SDE C++ + +C S +CI + +C+ DC
Sbjct: 125 SRQCDREYDC-KDMSDEVG-CVNVTLCEGPNKFKCH-SGECITLDKVCNMARDC 175
>gi|402888264|ref|XP_003907490.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like,
partial [Papio anubis]
Length = 1393
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 123/401 (30%), Positives = 168/401 (41%), Gaps = 99/401 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGED--EGPFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV + CDG DC + D E F N +C FSC G+CI +W CDG
Sbjct: 716 IRCNSTSLCVLPTWICDGSNDCGDYSDYLECVFQNKHKCEENYFSCPSGRCILTTWICDG 775
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C+ ++KCI +W+CD E DC D +D +D
Sbjct: 776 QQDC-EDGLDEFH-CDSSCSWNQFACS-AQKCISKHWICDGEDDCG--DGLDESDSICGA 830
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVL 339
C C S C+P +WLCD E DC ST N D + + HN V
Sbjct: 831 -ATCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKV- 888
Query: 340 CHPNEL---------------------RCGSS------NQCVALSKF-CDGKPDCSNGED 371
C P + +CG+ +C+ +++ CDG DC + D
Sbjct: 889 CIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCPDHSD 948
Query: 372 EGPF-----------------------------CNNKADCENLK---------------- 386
E P CNNK DC +
Sbjct: 949 EAPLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVS 1008
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 1009 GCSQDCQDLPISYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTD 1067
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 1068 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 1105
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 109/258 (42%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 635 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 693
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D + +
Sbjct: 694 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDYLECVFQNK 751
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI W+CD + DC D DE H C N+ C
Sbjct: 752 HKCEENYFSCP-SGRCILTTWICDGQQDCE-----DGLDE------FHCDSSCSWNQFAC 799
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S+ +C++ CDG+ DC +G DE C AD + + SH C P
Sbjct: 800 -SAQKCISKHWICDGEDDCGDGLDESDSICGAATCAADMFSCQGSHACVPRHWLCDGERD 858
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 859 CPNGSDELSTAGCAPNNT 876
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 75/163 (46%), Gaps = 7/163 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 587 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 646
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 647 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 700
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+F V +RC S++ CV + CDG DC + D
Sbjct: 701 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSD 742
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 117/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 416 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 475
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 476 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 535
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQ----CFNGQVQCALSKK 257
+ C + C +G V+C G E N C+ + + +C + +
Sbjct: 536 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNIYSEFECG-NGE 594
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 595 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 648
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 649 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 694
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 695 ----KNCNNTDCTH 704
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G H V+
Sbjct: 93 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLEAGGHREVV 150
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 37/85 (43%), Gaps = 16/85 (18%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 1195 ILVSKRLKFPRDLSLDPRAGYLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 1254
Query: 136 YNQDILYWCDSHLNTVESVRVDGSH 160
Y LYW D N +E +DGSH
Sbjct: 1255 YVNHRLYWADE--NHIEFSNMDGSH 1277
>gi|195355477|ref|XP_002044218.1| GM22597 [Drosophila sechellia]
gi|194129507|gb|EDW51550.1| GM22597 [Drosophila sechellia]
Length = 1980
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 279 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 337
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 338 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 392
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 393 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSLGSEHPLTCGSDEF 447
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 448 TC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 506
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 507 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETTAGLNECACRLGYVMDKNKVNCTDID 566
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 567 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 622
Query: 476 RIHLN 480
R+ L+
Sbjct: 623 RVTLS 627
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ +YW D+ + +E +DGS N +L
Sbjct: 749 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKIYWADAKQHAIECSNLDGSDRNKILS 808
Query: 166 ----HPNEL 170
HP L
Sbjct: 809 THLPHPFAL 817
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ ++
Sbjct: 1366 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLI 1424
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1061 DPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1120
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1121 LNGLGHPFGL 1130
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1324 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1383
Query: 167 PN 168
N
Sbjct: 1384 AN 1385
>gi|354500299|ref|XP_003512238.1| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Cricetulus griseus]
Length = 1957
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 156/399 (39%), Gaps = 95/399 (23%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 81 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 140
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ +KCI +W+CD E DC D +D +D
Sbjct: 141 QKDC-EDGLDELH-CDSSCSWNQFACSV-QKCISKHWICDGEDDCG--DSLDESDSICGA 195
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C + C S C+P +WLCD E DC ST N D + + N V
Sbjct: 196 V-TCASDMFSCQGSHACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCDENAFMCRNMVC 254
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E RC V CDG DC +G DE
Sbjct: 255 IPKQFVCDHDDDCGDGSDEFLQCGYRQCSAEEFRCADGRCLVNTLWQCDGDFDCPDGSDE 314
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C+++ DC +
Sbjct: 315 APINPKCRSAEHSCNSSFFMCKNGRCIPSGGLCDSRDDCGDGSDERNCHINECLSKKVSG 374
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C C EG
Sbjct: 375 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCHCAEG 433
Query: 444 YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y +PD ++ DE +I + +IR+I +GS
Sbjct: 434 YETQPDNQN--GCRSLSDEEPFLILADQHEIRKISTDGS 470
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 147/368 (39%), Gaps = 91/368 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--- 198
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 969 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEKNCE 1025
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P A C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q +C C
Sbjct: 1026 PAFPA-CSSSEYLCASGGCLSASLKCNGEPDCV-DGSDEMD-CMIECKEDQFRCKNKAYC 1082
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDE 312
IP WLCD DC VD +DE+ C G C + C H W+CD
Sbjct: 1083 IPIRWLCDGIYDC-----VDGSDEE-----NCGRGGSICRADEFLCNNSLCKLHFWVCDG 1132
Query: 313 EMDCS--------------------------------------TDDIVDNTDEDW-DKYF 333
E DC +D DN+DED
Sbjct: 1133 EDDCGDNSDEAPDMCVKFLCPPTRPHRCRNDRICLQLEKMCNGINDCGDNSDEDHCSGEL 1192
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------------GPFCNN 378
S C +E C ++ C+ + CDG DC +G DE G C +
Sbjct: 1193 SFKVKPCKKDEFAC-NNKMCIPMELQCDGLDDCGDGSDEQGCTKSISEHTCEKNGNPCGD 1251
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
A C +K S C C G +N QC D +ECL+ G C Q C NT SY
Sbjct: 1252 DAYCNQIKTS---------VFCRCKPGFRRNMKGRQCEDLNECLVFGVCSQHCVNTQGSY 1302
Query: 437 VCSCTEGY 444
C C + +
Sbjct: 1303 KCVCDQNF 1310
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ +C +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 754 CTASQFQC-KTDKCIPFWWKCDTVDDCGDGSDEPEDCPEFKCQPGRFQCGTGLCALPAFI 812
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C ++KCIP N C+ + DC D DE
Sbjct: 813 CDGENDC-GDNSDELNCETHVCLPGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 866
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 867 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 916
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 917 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 944
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 832 VCLPGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 891
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 892 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 944
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 945 ENCKPQTCTLKDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 992
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 993 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 1021
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 141/394 (35%), Gaps = 115/394 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT------------------ 206
C E RC + C+ S C+ DC + DE N +CT
Sbjct: 28 CSTVEFRC-ADGTCIPKSAQCNQNMDCEDASDEKNCNNTDCTHYYKLGVKSTGFIRCNST 86
Query: 207 -------------------------PGQ---------FSCGMGKCIPESWKCDGFVDCLE 232
P Q F C G+CI +W CDG DC E
Sbjct: 87 SLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDGQKDC-E 145
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
DG DE + C C Q C++ +KCI +W+CD E DC D +D +D C +
Sbjct: 146 DGLDELH-CDSSCSWNQFACSV-QKCISKHWICDGEDDCG--DSLDESDSICGAV-TCAS 200
Query: 293 GQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV------- 338
C S C+P +WLCD E DC ST N D + + N V
Sbjct: 201 DMFSCQGSHACVPRHWLCDGERDCPDGSDELSTAGCAPNNTCDENAFMCRNMVCIPKQFV 260
Query: 339 --------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--- 375
C E RC V CDG DC +G DE P
Sbjct: 261 CDHDDDCGDGSDEFLQCGYRQCSAEEFRCADGRCLVNTLWQCDGDFDCPDGSDEAPINPK 320
Query: 376 -------CNNK-ADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLID--G 423
CN+ C+N +C P G +C G ++ C +ECL
Sbjct: 321 CRSAEHSCNSSFFMCKNGRC------IPSGGLCDSRDDCGDGSDERNC-HINECLSKKVS 373
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C Q C + +SY C C G+ L+ DGK+C ++
Sbjct: 374 GCSQDCQDLPVSYKCKCWPGFQLKDDGKTCVDID 407
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 87/212 (41%), Gaps = 43/212 (20%)
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQC-----FNGQV 250
F + C+ +F C G CIP+S +C+ +DC ED SDE N C H G +
Sbjct: 23 FIVSTCSTVEFRCADGTCIPKSAQCNQNMDC-EDASDEKNCNNTDCTHYYKLGVKSTGFI 81
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
+C + C+ +W+CD DC D D H+C C S +CI + W+C
Sbjct: 82 RCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNKHKCEENYFGCP-SGRCILNTWVC 138
Query: 311 DEEMDC--STDDIVDNTDEDWDKYFSH----------------------------NAVLC 340
D + DC D++ ++ W+++ AV C
Sbjct: 139 DGQKDCEDGLDELHCDSSCSWNQFACSVQKCISKHWICDGEDDCGDSLDESDSICGAVTC 198
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV CDG+ DC +G DE
Sbjct: 199 ASDMFSCQGSHACVPRHWLCDGERDCPDGSDE 230
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCA 298
TC+ C Q QC + KCIP W CD + DD D +DE D +C G+ QC
Sbjct: 749 TCLSNCTASQFQCK-TDKCIPFWWKCD-----TVDDCGDGSDEPEDCPEFKCQPGRFQCG 802
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+P ++CD E DC DN+DE + +C P + +C + +C+ ++
Sbjct: 803 TGLCALPA-FICDGENDCG-----DNSDE-----LNCETHVCLPGQFKCTKNQKCIPVNL 851
Query: 359 FCDGKPDCSNGEDE 372
C+G+ DC + EDE
Sbjct: 852 RCNGQDDCGDEEDE 865
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 1489 IEEAAMDGTLRRILVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDG 1539
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH
Sbjct: 592 IGRVGMDGTNQSVVIETKISRPMALTIDYINHRLYWADE--NHIEFSNMDGSH 642
>gi|198454262|ref|XP_002137824.1| GA27443, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132718|gb|EDY68382.1| GA27443, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1096
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 117/375 (31%), Positives = 155/375 (41%), Gaps = 73/375 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A C P+E C + QCV L+ CD DCS+G DE CN C +F+CG G+CI
Sbjct: 276 KARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEFTCGNGRCIQ 334
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDEPN 239
+ W CDG DC D SDE +
Sbjct: 335 KRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRWVCDGDPDC-SDASDERS 393
Query: 240 -----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFN 292
C + QC C+ H+WLCD + DC D DE K C
Sbjct: 394 CANVTKTTTPCLAHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRP 448
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHP-NELRCGSS 350
Q QC + CI + C+ + DC+ D +DE D C+ +E CG
Sbjct: 449 DQFQCG-DRSCIAGHLTCNGDKDCA-----DGSDEKDCSLSLGTTKGACNATSEFDCGG- 501
Query: 351 NQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-- 406
QC+ALS+ CD + DC +GEDE G N+ +N C H C G C C G
Sbjct: 502 GQCIALSRVCDKRKDCPDGEDEPAGKCGVNECASKNGGCMHHCVDLAVGHRCECHEGYKL 561
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPAS 465
+ +K CVD DEC G+C Q C N + C C GY P + C A + AS
Sbjct: 562 SGDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHAS 617
Query: 466 IIFSSTVDIRRIHLN 480
++ + DIR+I L+
Sbjct: 618 LLLARRHDIRKIALD 632
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 105/254 (41%), Gaps = 65/254 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C + + C+ + CDG DC + DE F A C+ QF C G CIP
Sbjct: 157 CDEKQFQCRNGD-CIPIRYVCDGDADCKDHSDEQVTECKFLEATCSADQFRCTNGNCIPN 215
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W+CD DC DGSDE C++ C N + +C ++CIP WLCD DC D
Sbjct: 216 KWRCDQENDC-ADGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGNSDCR-----DK 269
Query: 280 TDEDWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-A 337
+DE K C + C + +C+P W+CD+ DCS D +DE HN
Sbjct: 270 SDEAHCKARTCSPDEYACKNGEGQCVPLAWMCDQSKDCS-----DGSDE-------HNCN 317
Query: 338 VLCHPNELRCG---------------------------------------SSNQCVALSK 358
C +E CG ++ C+A
Sbjct: 318 QTCRSDEFTCGNGRCIQKRWVCDHDDDCGDGSDERECPVVPCDAVAEHTCTNGACIAKRW 377
Query: 359 FCDGKPDCSNGEDE 372
CDG PDCS+ DE
Sbjct: 378 VCDGDPDCSDASDE 391
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 85/180 (47%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C Q +C
Sbjct: 150 GQALEAKCDEKQFQCRNGDCIPIRYVCDGDADCKDHSDEQVTECKFLEATCSADQFRCT- 208
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ CIP+ W CD+E DC+ D +DE + C N + +C ++CIP WLCD
Sbjct: 209 NGNCIPNKWRCDQENDCA-----DGSDEATALCMNACPNNEFKCQTVEQCIPRGWLCDGN 263
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDE 372
DC D +DE K A C P+E C + QCV L+ CD DCS+G DE
Sbjct: 264 SDCR-----DKSDEAHCK-----ARTCSPDEYACKNGEGQCVPLAWMCDQSKDCSDGSDE 313
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 755 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 814
Query: 167 PNEL 170
E
Sbjct: 815 STEY 818
>gi|341880073|gb|EGT36008.1| hypothetical protein CAEBREN_12029 [Caenorhabditis brenneri]
Length = 1177
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 147/371 (39%), Gaps = 84/371 (22%)
Query: 163 VLCHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMG 215
V C N+ +C G + C+ + CDG+ DC+NG+DE A+C F C G
Sbjct: 383 VSCQENQFQCEELSGEYSLCIPRTWVCDGQRDCTNGKDEQNCSKKATAKCPENNFQCANG 442
Query: 216 KCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
CI ++W CDG DC DGSDE N ++QC G++ S +CIP W CD E
Sbjct: 443 NCIFKNWVCDGEEDC-SDGSDELLTEPSHCNRTVNQCPPGEMWKCGSGECIPSRWRCDSE 501
Query: 269 MDCSTDDIVDNTDED--WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCS----TDDI 321
+DC D++DE H C G+ C S KCI +++CD E DC+ DD
Sbjct: 502 VDCK-----DHSDEKNCTAIQHSCKLAGEFACKSSNKCINKSFVCDGEFDCADGSDEDDC 556
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSN---QCVALSKFCDGKPDCSNGEDE------ 372
VD E C P G+ C+ S +C+G+ DC +G DE
Sbjct: 557 VDAKKE----CVPEKERACSPTYGAYGAETGHVMCIPASSWCNGEEDCPDGGDEKNCTTP 612
Query: 373 ------------------------GPFCN---------NKADCENLKCSHKCSPTPRG-- 397
C+ N + C K + C G
Sbjct: 613 VAPATCQAGTEYQCPSTPLQCLEMSKLCSSAKFDCGDGNLSVCGQSKITEMCDAHVDGCV 672
Query: 398 ---------AMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
+C C G QCVD +EC G CDQ C N SY C+C GY L
Sbjct: 673 CRPSYIRDTTVCHCKDGYKLENGQCVDINECTTAGICDQICLNIPGSYRCACHAGYKLSF 732
Query: 449 DGKSCTAVNVP 459
+ +P
Sbjct: 733 GESRTSGSTIP 743
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 131/306 (42%), Gaps = 41/306 (13%)
Query: 164 LCHPNELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-- 212
+C +E +CG +C+ CDG+ DC + DE N C QF C
Sbjct: 335 VCAADEHKCGDVRSARSSLERFKCIPNKWVCDGEFDCEDKSDEFKCENVSCQENQFQCEE 394
Query: 213 ---GMGKCIPESWKCDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCD 266
CIP +W CDG DC +G DE N +C QCA + CI NW+CD
Sbjct: 395 LSGEYSLCIPRTWVCDGQRDCT-NGKDEQNCSKKATAKCPENNFQCA-NGNCIFKNWVCD 452
Query: 267 EEMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
E DCS +D+++ +QC G++ S +CIP W CD E+DC D+
Sbjct: 453 GEEDCSDGSDELLTEPSHCNRTVNQCPPGEMWKCGSGECIPSRWRCDSEVDCK-----DH 507
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+DE H+ L E C SSN+C+ S CDG+ DC++G DE + K +C
Sbjct: 508 SDEKNCTAIQHSCKLA--GEFACKSSNKCINKSFVCDGEFDCADGSDEDDCVDAKKECVP 565
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDA------DECLIDGSCDQTCTNTHLSYVC 438
K CSPT + G C+ A +E DG ++ CT C
Sbjct: 566 EK-ERACSPT------YGAYGAETGHVMCIPASSWCNGEEDCPDGGDEKNCTTPVAPATC 618
Query: 439 SCTEGY 444
Y
Sbjct: 619 QAGTEY 624
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 112/242 (46%), Gaps = 38/242 (15%)
Query: 204 ECTP-GQFSCGMGKCIPESWKCDGFVDC--LEDGSDEPNTCI---HQCFNGQVQCALSK- 256
EC P + C +CIP SW+CDG +DC ED + P C H+C G V+ A S
Sbjct: 296 ECDPIHSYKCKDDRCIPLSWRCDGDIDCPDEEDEKNCPKVCAADEHKC--GDVRSARSSL 353
Query: 257 ---KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALSKK---CIPHNWL 309
KCIP+ W+CD E DC D +DE + C Q QC LS + CIP W+
Sbjct: 354 ERFKCIPNKWVCDGEFDCE-----DKSDEFKCENVSCQENQFQCEELSGEYSLCIPRTWV 408
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD + DC+ +D C N +C + N C+ + CDG+ DCS+G
Sbjct: 409 CDGQRDCT-------NGKDEQNCSKKATAKCPENNFQCANGN-CIFKNWVCDGEEDCSDG 460
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQT 428
DE E C+ + P G M C +G+ P++ +C +C D S ++
Sbjct: 461 SDE-------LLTEPSHCNRTVNQCPPGEMWKCGSGECIPSRWRCDSEVDCK-DHSDEKN 512
Query: 429 CT 430
CT
Sbjct: 513 CT 514
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 90 LLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKN-IQWPSSLVI 134
+L S DL P +D R+E++GM G++R +V + + WP+ L +
Sbjct: 873 VLYSNDLEEPRAIAVDPEVGLIFWTDWGKNARIERSGMDGQHRVVIVEGDRVVWPNGLAL 932
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
DY +YW D+ + ++ S G + H ++
Sbjct: 933 DYVDKRVYWADAKIKSIFSCDYWGKDIKTVLHSHQF 968
>gi|25012574|gb|AAN71387.1| RE38584p [Drosophila melanogaster]
Length = 739
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 111/350 (31%), Positives = 146/350 (41%), Gaps = 68/350 (19%)
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK-------------------- 223
CD DCS+G DE CN C +F+CG G+CI + WK
Sbjct: 1 MCDQSKDCSDGSDEHN-CNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVP 59
Query: 224 --------------------CDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKC 258
CDG DC DGSDE + C + + QC C
Sbjct: 60 CDSVAEHTCTNGACIAKRWVCDGDPDC-SDGSDERSCANVTKTTTPCLSHEYQCKDRITC 118
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ H+WLCD + DC D DE K C Q QC + CIP + C+ + DC
Sbjct: 119 LHHSWLCDGDRDCP-----DGDDEHTANCKNVTCRADQFQCG-DRSCIPGHLTCNGDKDC 172
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE--G 373
+ D D D N C+ +E CG QCV LSK CD + DC +GEDE G
Sbjct: 173 A--DGSDERDCGLSLSLGINQGGCNATSEFDCGG-GQCVPLSKVCDKRKDCPDGEDEPAG 229
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTN 431
N+ +N C H+C G C C G +P+K C D +EC + G C Q C N
Sbjct: 230 KCGINECASKNGGCMHQCIDLKVGHHCECHEGYKLSPDKRNCQDINECEVPGKCSQICVN 289
Query: 432 THLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ C C GY P + C A + AS++ + DIR+I L+
Sbjct: 290 EIGGFKCECEAGYMRDPKNHTRCKA----SEGHASLLLARRHDIRKIALD 335
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 458 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 517
Query: 167 PNEL 170
E
Sbjct: 518 SGEY 521
>gi|307775422|ref|NP_001182732.1| low-density lipoprotein receptor isoform 6 precursor [Homo sapiens]
gi|194382908|dbj|BAG59010.1| unnamed protein product [Homo sapiens]
Length = 682
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 133/292 (45%), Gaps = 28/292 (9%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQCA-L 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + QC+ CI + CD E
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPVATCRPDEFQCS-DGNCIHGSRQCDREY 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE N LC PN+ +C S +C+ L K C+ DC + DE
Sbjct: 133 DCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEP 182
Query: 374 PFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCT 430
+C N CSH C+ G C CP G Q + +C D DEC +C Q C
Sbjct: 183 IKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCV 242
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 243 NLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 290
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 409 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 460
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 461 IDVNGGNRKTILEDEKRLAHPFSL 484
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE A C P +F C G CI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPVATCRPDEFQCSDGNCIHG 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDC 271
S +CD DC +D SDE C++ + +C S +CI + +C+ DC
Sbjct: 125 SRQCDREYDC-KDMSDEVG-CVNVTLCEGPNKFKCH-SGECITLDKVCNMARDC 175
>gi|21750962|dbj|BAC03874.1| unnamed protein product [Homo sapiens]
Length = 752
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 149/334 (44%), Gaps = 36/334 (10%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C +F C C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDELDCAPPTCGAHEFQCSTSSC 84
Query: 218 IPESWKCDGFVDCLEDGSDEP------NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMD 270
IP SW CD DC D SDE IH +C ++QC S +CI W CD + D
Sbjct: 85 IPISWVCDDDADC-SDQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPD 142
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D +DE C Q +C CI + C+ DC VD +DE
Sbjct: 143 CK-----DGSDEVNCPSRTCRPDQFECE-DGSCIHGSRQCNGIRDC-----VDGSDE--- 188
Query: 331 KYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLK 386
N C P + +C S +C+ +SK C+ + DC + DE P N+ N
Sbjct: 189 -VNCKNVNQCLGPGKFKC-RSGECIDISKVCNQEQDCRDWSDE-PLKECHINECLVNNGG 245
Query: 387 CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C G C C AG + ++ C D DEC G C Q C N Y C C+ GY
Sbjct: 246 CSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCECSRGYQ 305
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ C AV EP S+IF++ DIR+I L
Sbjct: 306 MDLATGVCKAVG---KEP-SLIFTNRRDIRKIGL 335
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 376 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 434
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 435 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 494
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 495 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 522
>gi|308485142|ref|XP_003104770.1| CRE-LRP-2 protein [Caenorhabditis remanei]
gi|308257468|gb|EFP01421.1| CRE-LRP-2 protein [Caenorhabditis remanei]
Length = 4864
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 147/332 (44%), Gaps = 35/332 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-QFSCGMGK--CIPE 220
LC P E RCG+ C+ K CDG C +G DE +C G +F C GK C+
Sbjct: 1072 LCGPEEFRCGTG-ICIPQLKVCDGVSHCLDGLDERNCDEEKCIKGREFRCSNGKSPCLDA 1130
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFN-----GQVQCALSKKCIPHNWLCDEEMDCSTDD 275
++CDG DC ++ + P C + Q CA KC+ LCD DC T +
Sbjct: 1131 IFQCDGVADCEDESDESPEFCKGNTSSTCSKMNQFMCA-DGKCLRSFQLCDGFPDCLTGE 1189
Query: 276 IVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DE C + C KCI CD DD D TDE K
Sbjct: 1190 -----DEKECPASMCNSTTHISCKNGNKCISKQLACD-----GVDDCGDKTDELNCKNIR 1239
Query: 335 HNA--VLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN-LKCSHK 390
+A + C +C S +C++ + CDGK DC G+DEG +C+ K + N L CSH
Sbjct: 1240 LDAANLRCKAPMYKCDSEQFECISDKQLCDGKNDCPGGDDEGIWCSFKCNATNELGCSHT 1299
Query: 391 CSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C TP G +C CP +K C D C G C Q C ++C C +G+ L
Sbjct: 1300 CRATPSGPICSCPDEHYLDKDGVTCSKKDPCRF-GQCSQHCIPHGSRHLCYCEDGFKLSN 1358
Query: 449 DGKSCTAVNVPQDEPAS--IIFSSTVDIRRIH 478
DG SC + D+P +I+S+ +IR I
Sbjct: 1359 DGFSCVS-----DDPQKPYLIYSNRHEIRMIQ 1385
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 106/241 (43%), Gaps = 35/241 (14%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-----EC 205
+ R +G C PN+ C + +C+A CDG+ DC + EDEG F + C
Sbjct: 3469 AQGFRSEGRSCVSECKPNDFVCTKTYKCIASWWRCDGQDDCGDAEDEGFFLDGVCPPFPC 3528
Query: 206 TPGQFSC------GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKC 258
PGQF C +C+ S CDG DC +E + C + +C Q +C KKC
Sbjct: 3529 DPGQFVCSKTAPNATAQCLYASKLCDGSKDCSGGDDEEESFCENFECTEAQFKCLDKKKC 3588
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDED-------WDKFHQCFNGQVQCALSKKCIPHNWLCD 311
IP +CD + DC D +DE F C N + KCIP ++ CD
Sbjct: 3589 IPLTSVCDNKKDCH-----DGSDEKECDIKSCKPDFFACVNETT--SQITKCIPRDFYCD 3641
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
E DC N ++ D F C + +C S +C+ + CDG+ DC +G D
Sbjct: 3642 GEDDCP------NGQDEPDTCFGIGE--CTHEQFQC-DSGKCIPKRRRCDGEIDCKDGSD 3692
Query: 372 E 372
E
Sbjct: 3693 E 3693
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 114/285 (40%), Gaps = 66/285 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPESW 222
C NE +C S+ C+ CD DC +DE +C+ C PG F+CG G CIPE
Sbjct: 2646 CAENEFKCLHSDLCIRYEDTCDQFNDCPMFDDEDAKYCSTRVCRPGYFNCGNGLCIPEQK 2705
Query: 223 KCDGFVDCL-----------------------------------EDGSDEPNTCIHQC-- 245
C+ DC D SDE C
Sbjct: 2706 LCNRVNDCTNFADEANCTCSGNEFRCTSGTCIPRTARCNHVQDCNDASDEIGCPFRNCSV 2765
Query: 246 -----FNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKFHQC------FN 292
G + C + +CI +W CD DC +D+ D D++K
Sbjct: 2766 LNEFGLTGLINCQTTSQCIHPSWKCDGTNDCYDGSDETDCLVDFDFNKGSVSPPRSCDSE 2825
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C ++ C+P W CD + DC+ D +DE K A C+ E CG S +
Sbjct: 2826 TQFACLATRNCMPKRWRCDGQPDCA-----DGSDE---KDCEEKA--CNSFEFTCGFSKK 2875
Query: 353 CVALSKFCDGKPDCSNGEDEGP---FCNNKADCENLKCS-HKCSP 393
C+ L + CDG+ DC NGEDE C++K +C+ H+C P
Sbjct: 2876 CIPLEQKCDGRSDCPNGEDENSCETECDSKDANSTFRCTNHRCIP 2920
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
KC P W CD DC D +DE C + C + +C+P +LCD + DC
Sbjct: 52 KCYPEQWYCDGYPDCQ-----DGSDEPSTCRRPCLQSEFVCK-TGRCLPPGYLCDGQPDC 105
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ D + + C NE C S QCV L KFCDGK DCS+G DE C
Sbjct: 106 GRFPSGEKDLSDEAPEMCNQPLHCEQNEYACLKSAQCVPLFKFCDGKLDCSDGSDEHAMC 165
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPN-KTQCVDADECL-----IDGSCDQTCT 430
+ + KC + + T G C+CP + N K +C D C + C Q C+
Sbjct: 166 HVEDPTTADKCEYGAAMTMDGIKCYCPGNKILNEKGKCEFLDYCAKVKNGLPPVCSQGCS 225
Query: 431 N-THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
+ + ++ CSC + +G C NV P I +
Sbjct: 226 DHKNGTFSCSCFDPRLSLVNGTHCVE-NVKASTPTIAILT 264
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 143/346 (41%), Gaps = 49/346 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC----TPGQFSCGMGKCIPE 220
C+ E CG S +C+ L + CDG+ DC NGEDE C EC F C +CIP
Sbjct: 2863 CNSFEFTCGFSKKCIPLEQKCDGRSDCPNGEDENS-CETECDSKDANSTFRCTNHRCIPM 2921
Query: 221 SWKCDGFVDCLED----GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+W+CDG DCL++ GSDE + C G+ + +C + E+ D
Sbjct: 2922 AWRCDGTDDCLDNAKSLGSDEID-----CAPGKTSYHVPSRCTDETCVVACELTAVVCDG 2976
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
+ + + +D+ C + QC S +CI + LCD +DC +D +DE W
Sbjct: 2977 IRDCQDGFDE-ENCASLDRQCKKNEWMCDSGQCIDSSRLCDASVDC-----IDGSDE-WV 3029
Query: 331 KY--FSHNAVLCHPNELRCGSSN---QCVALSKFCDGKPDCSNGEDE------GPFCNNK 379
+ S PN C N C+ + CDGK DC +G DE G + +
Sbjct: 3030 EICSLSEPPKRGCPNGWSCVLKNGTIGCLQEKQLCDGKKDCMSGLDEKCDLPQGNCSSTR 3089
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQN---PNKTQCVDADECLIDGSCDQTCTNTH-LS 435
CE C C C G + +K C+ + C +C C + +
Sbjct: 3090 NSCEQ---PWNCHRHAGFETCSCDEGFHLSPYDKKTCLRSPSCP-KANCSHFCIDRRDIG 3145
Query: 436 YVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ C C GY L + + C + + E I+ ++ +NG
Sbjct: 3146 HQCFCAPGYILADNQRDCRRNDTIEPE---ILLVYGHRLKLFTING 3188
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 128/324 (39%), Gaps = 97/324 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC------GMGKCI 218
C + +C +C+ L+ CD K DC +G DE C P F+C + KCI
Sbjct: 3575 CTEAQFKCLDKKKCIPLTSVCDNKKDCHDGSDEKECDIKSCKPDFFACVNETTSQITKCI 3634
Query: 219 PESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
P + CDG DC +G DEP+TC I +C + Q QC S KCIP CD E+DC
Sbjct: 3635 PRDFYCDGEDDC-PNGQDEPDTCFGIGECTHEQFQCD-SGKCIPKRRRCDGEIDCK---- 3688
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCST---------------- 318
D +DE K +CA+ CIP N LCD + C+
Sbjct: 3689 -DGSDERGCK--------KECAIVCDNTCIPVNDLCDGKSRCTDGSDEDEDACATKKLFD 3739
Query: 319 ------------DDIVD---NTDE----DWDKYFSHNAVLCHPNELRCGS---------- 349
D IVD +DE D + + S N L ++ C S
Sbjct: 3740 KPALRRCGGFTCDGIVDCEDGSDEKGCPDLECHLSSNESLICDGKIDCESGKDEQNCQSY 3799
Query: 350 ----------SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
S Q V + CDG+ DC++G DE P C+ R A
Sbjct: 3800 GGYSNPLFQCSRQTVKEWQVCDGRWDCADGLDESP--------------EMCA--TRKAG 3843
Query: 400 CFCPAGQNPNKTQCVDADECLIDG 423
CF G +K QC+D L DG
Sbjct: 3844 CF-RIGFCDDKKQCLDVSTALCDG 3866
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWKCDGF 227
+ C ++ C+ CDG+PDC++G DE C +F+CG KCIP KCDG
Sbjct: 2827 QFACLATRNCMPKRWRCDGQPDCADGSDEKDCEEKACNSFEFTCGFSKKCIPLEQKCDGR 2886
Query: 228 VDCLEDGSDEPNTCIHQC----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DC +G DE N+C +C N +C + +CIP W CD TDD +DN
Sbjct: 2887 SDC-PNGEDE-NSCETECDSKDANSTFRCT-NHRCIPMAWRCD-----GTDDCLDNAKSL 2938
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---C 340
C G+ + +C + E+ D + + + +D+ + A L C
Sbjct: 2939 GSDEIDCAPGKTSYHVPSRCTDETCVVACELTAVVCDGIRDCQDGFDE--ENCASLDRQC 2996
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
NE C S QC+ S+ CD DC +G DE
Sbjct: 2997 KKNEWMC-DSGQCIDSSRLCDASVDCIDGSDE 3027
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 138/361 (38%), Gaps = 78/361 (21%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N ++ + A+ SW + + +E++ + G R LV+KN W + L +D
Sbjct: 718 NPRAIAIHIAKSYLFWGSWSEENADDESIPAMIERSKLDGTERKTLVSKNAMWINGLALD 777
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLC-------HP------------NELRCGS-- 174
D LYWCD++ N +E +R +GS +L HP E + G+
Sbjct: 778 LKNDFLYWCDAYRNVIERIRWNGSDREILIQGVDKISHPYGLAFFDNHIFFTEFKRGAVK 837
Query: 175 ----------------SNQCVALSKFCDGKPD----CSNGEDE-GPFCNAECTPGQFSCG 213
S L+ F + P+ CS + FC A G C
Sbjct: 838 RVHVDFPEEVQEIFQHSATVFELAVFKNSPPNTTSPCSTSSNNCEHFCFASSCKGTVGCE 897
Query: 214 MGKC-IPESWKCDGFVDCLEDGS-DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM-- 269
KC + K C+ D +P+ C + + C SKKCI +CD +
Sbjct: 898 PVKCGCADGMKLISNGKCVRDEKWIDPSACDDET---EFTCLHSKKCISRQNICDGDDDC 954
Query: 270 -------------DCSTDDIVDNT-----DEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C T ++D ED+ +C + QC CIP ++LCD
Sbjct: 955 GDGSDEDPNAVCSKCFTSGLLDKKLIFMFPEDF----KCVGHRFQCD-GINCIPPSFLCD 1009
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+ DC+ D D D K C ++ RC S +C+ L K C+G DC NG D
Sbjct: 1010 GKTDCA--DGTDELDHLCKKAVKQE---CTADQFRC-SKTKCIDLLKKCNGVKDCDNGSD 1063
Query: 372 E 372
E
Sbjct: 1064 E 1064
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC--- 230
S +C +CDG PDC +G DE C C +F C G+C+P + CDG DC
Sbjct: 49 SGPKCYPEQWYCDGYPDCQDGSDEPSTCRRPCLQSEFVCKTGRCLPPGYLCDGQPDCGRF 108
Query: 231 ---LEDGSDE-PNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDE 282
+D SDE P C C + C S +C+P CD ++DCS +D+ E
Sbjct: 109 PSGEKDLSDEAPEMCNQPLHCEQNEYACLKSAQCVPLFKFCDGKLDCSDGSDEHAMCHVE 168
Query: 283 DWDKFHQCFNGQVQCALSKKCI-PHNWLCDEEMDC 316
D +C G KC P N + +E+ C
Sbjct: 169 DPTTADKCEYGAAMTMDGIKCYCPGNKILNEKGKC 203
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 134/353 (37%), Gaps = 61/353 (17%)
Query: 95 DLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D PA ++ D + + G R ++ K+++ +L + +D +YW D H +T+
Sbjct: 3343 DTPAQRLYFGDAHRDYIASCNYDGTKRRIVLRKSVRHIFALAV--FEDYVYWSDWHNHTI 3400
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSN----QCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
E V ++ G + +L + R ++ K CS C +
Sbjct: 3401 ERVHKITGDNRKILIQDKQYRPMGFKIVHPSLQSMGSLKTAKHPCSQPARCDNLCIPANS 3460
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
P +F+C C + E +C+ +C C + KCI W CD
Sbjct: 3461 PEEFTCM----------------CAQGFRSEGRSCVSECKPNDFVCTKTYKCIASWWRCD 3504
Query: 267 EEMDCSTDDIVDNTDEDW--DKF---HQCFNGQVQCA-----LSKKCIPHNWLCDEEMDC 316
+ DC D DE + D C GQ C+ + +C+ + LCD DC
Sbjct: 3505 GQDDCG-----DAEDEGFFLDGVCPPFPCDPGQFVCSKTAPNATAQCLYASKLCDGSKDC 3559
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
S D D ++ F N C + +C +C+ L+ CD K DC +G DE C
Sbjct: 3560 SGGD-------DEEESFCEN-FECTEAQFKCLDKKKCIPLTSVCDNKKDCHDGSDEKE-C 3610
Query: 377 NNKA------DCENLKCSHKCSPTPRGAMC----FCPAGQNPNKTQCVDADEC 419
+ K+ C N S PR C CP GQ+ T C EC
Sbjct: 3611 DIKSCKPDFFACVNETTSQITKCIPRDFYCDGEDDCPNGQDEPDT-CFGIGEC 3662
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 25/40 (62%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE 204
C NE C S QCV L KFCDGK DCS+G DE C+ E
Sbjct: 129 CEQNEYACLKSAQCVPLFKFCDGKLDCSDGSDEHAMCHVE 168
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 100/285 (35%), Gaps = 38/285 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+ G R +V +++ L ID + + LY+ DS + DGSH ++
Sbjct: 2489 IERVFFSGFKREQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKISRCDYDGSHREIVVSN 2548
Query: 166 ------HPNELRCGSSNQCVA--LSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
HP EL + + G S E+ E G M K
Sbjct: 2549 SDIPSIHPFELAVYQDEIIFTDWVRRSVVGINKISGVENRTLNRATEVPVGLVVVDMEKE 2608
Query: 218 IPESWKCDGFVDC-----LEDGSDEPNTCI-----HQCFNGQVQCALSKKCIPHNWLCDE 267
E F L + S+ NT +C + +C S CI + CD+
Sbjct: 2609 FCEFSVSHMFYAIKHCRRLHEKSNSTNTYFTDIDDKKCAENEFKCLHSDLCIRYEDTCDQ 2668
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC + D+ D + C G C + CIP LC+ DC+
Sbjct: 2669 FNDCP---MFDDEDAKYCSTRVCRPGYFNCG-NGLCIPEQKLCNRVNDCTN--------- 2715
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C NE RC +S C+ + C+ DC++ DE
Sbjct: 2716 ----FADEANCTCSGNEFRC-TSGTCIPRTARCNHVQDCNDASDE 2755
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 172 CGSSNQCVALS-KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
C QC+ +S CDG DC +G DE P + +F C G+CI E +CDG DC
Sbjct: 3850 CDDKKQCLDVSTALCDGIKDCVDGSDEAPAHCRDMCRDKFKCTNGRCIDELARCDGRDDC 3909
Query: 231 LEDGSDEPNTCIHQC 245
DGSDE +TC +C
Sbjct: 3910 -GDGSDE-DTCGLEC 3922
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF-SCGMGKCIPESWKCDGFVDCLEDG 234
N C+ ++ CDGK C++G DE +A T F + +C + CDG VDC EDG
Sbjct: 3706 NTCIPVNDLCDGKSRCTDGSDEDE--DACATKKLFDKPALRRC--GGFTCDGIVDC-EDG 3760
Query: 235 SDE---PNTCIHQCFN------GQVQCALSK---KCIPHNWLCDEEMDCSTDDIVD--NT 280
SDE P+ H N G++ C K C + + CS + +
Sbjct: 3761 SDEKGCPDLECHLSSNESLICDGKIDCESGKDEQNCQSYGGYSNPLFQCSRQTVKEWQVC 3820
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC---------STDDIVDNTDEDWDK 331
D WD CA K CD++ C D VD +DE
Sbjct: 3821 DGRWDCADGLDESPEMCATRKAGCFRIGFCDDKKQCLDVSTALCDGIKDCVDGSDEAP-- 3878
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H +C ++ +C ++ +C+ CDG+ DC +G DE
Sbjct: 3879 --AHCRDMCR-DKFKC-TNGRCIDELARCDGRDDCGDGSDE 3915
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM----GKCIPESWK-CDGFVD 229
S Q V + CDG+ DC++G DE P A G F G +C+ S CDG D
Sbjct: 3810 SRQTVKEWQVCDGRWDCADGLDESPEMCATRKAGCFRIGFCDDKKQCLDVSTALCDGIKD 3869
Query: 230 CLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+ DGSDE P C C + + +C + +CI CD DC D +DED
Sbjct: 3870 CV-DGSDEAPAHCRDMCRD-KFKCT-NGRCIDELARCDGRDDCG-----DGSDED 3916
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 84/210 (40%), Gaps = 43/210 (20%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC----TPGQFSCGMGKCIPESWKC 224
E C S +C++ CDG DC +G DE P NA C T G + PE +KC
Sbjct: 932 EFTCLHSKKCISRQNICDGDDDCGDGSDEDP--NAVCSKCFTSGLLDKKLIFMFPEDFKC 989
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
G + QC CIP ++LCD + DC+ D D D
Sbjct: 990 VGH---------------------RFQCD-GINCIPPSFLCDGKTDCA--DGTDELDHLC 1025
Query: 285 DKF--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
K +C Q +C+ + KCI C+ DC D D+ LC P
Sbjct: 1026 KKAVKQECTADQFRCSKT-KCIDLLKKCNGVKDC---------DNGSDEENCQQKNLCGP 1075
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E RCG+ C+ K CDG C +G DE
Sbjct: 1076 EEFRCGTG-ICIPQLKVCDGVSHCLDGLDE 1104
>gi|403258454|ref|XP_003921778.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Saimiri boliviensis boliviensis]
Length = 909
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 104/321 (32%), Positives = 138/321 (42%), Gaps = 32/321 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ RC + +C+ CD DCS+ DE C F+C G CI E WKC
Sbjct: 89 CEENQFRC-RNERCIPSVWRCDEDDDCSDHSDEDDCPKKTCADSDFTCDNGHCIRERWKC 147
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 148 DGEEEC-PDGSDESEATCTKQVCPAEKLSCGPASHKCVPASWRCDGEKDCE--------- 197
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
G + + C PH + C C V + D+D C
Sbjct: 198 ----------GGADEAGCAALCAPHEFQCGNR-SCLAAVFVCDGDDDCGDGSDEPLGTCR 246
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAM 399
+E +CG CV K C+ + DC +G DE +C N CSH C+ G
Sbjct: 247 GDEFQCGDGT-CVLAIKHCNHEQDCPDGSDEAGCLQGLNECLHNNGGCSHICTDLKNGFE 305
Query: 400 CFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C CPAG Q +K C D DEC +C Q C N + C C GY + K+C A
Sbjct: 306 CTCPAGFQLLDKKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAA-- 363
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
+ S+IF++ ++RRI L
Sbjct: 364 -AGKSPSLIFTNRHEVRRIDL 383
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + SV G + L
Sbjct: 510 KIEKAGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSVDFSGGNRKRL 567
>gi|270005136|gb|EFA01584.1| hypothetical protein TcasGA2_TC007146 [Tribolium castaneum]
Length = 2042
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 162/338 (47%), Gaps = 45/338 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNAECTPGQFSCGMGKCI 218
C +E C S C++LS CD + DCS+G DE P+CN G+F C +CI
Sbjct: 352 CSEDEFEC-SDESCISLSWKCDRQVDCSDGSDERDCDITPPYCNE----GEFECASKQCI 406
Query: 219 PESWKCDGFVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+KCDG DC + ++ C +G+ +C S KCIP + CD++ DC +
Sbjct: 407 KLKFKCDGDKDCDDWSDEDDCGKAPGNCVSGEFKCN-SGKCIPERYRCDKQQDCEEKE-- 463
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D + D+ C + C+ + CI W+CD DC + DE S
Sbjct: 464 DEANCDYSLARSCSPDEHTCS-NGACILKTWVCDGYNDCPQGE-----DE------SKCE 511
Query: 338 VLCHPNELRCG-------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSH 389
++C ++ C ++ C++ CDGK DC GEDE C K +CE + C+
Sbjct: 512 IVCDESKFSCSGHGINDTATEFCISRKHVCDGKKDCPKGEDESG-CPTKRECEKHTNCTQ 570
Query: 390 KCSPTPRGAM-CFCPAGQN--PNKTQCVDADECLI--DGSCDQTCTNTHLSYVCSCTEGY 444
C T G C C G + C D +ECL D C QTC NT S+ C C GY
Sbjct: 571 LCITTVDGRKGCDCIPGYKIASDGITCEDINECLYATDPVCSQTCNNTQGSFRCGCMTGY 630
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
LRPD ++C A+ +P +++F++ +DIR++ L+ +
Sbjct: 631 VLRPDLRTCKAIG----DPPTLLFANRIDIRQVSLSNA 664
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G RS +V+ N+ WP+ L ID++ +YW D +E DGS +
Sbjct: 1091 KIERAAMDGTMRSVIVSSNLTWPNGLAIDHSAGKIYWADGGTKAIECSNFDGSKRKTIIE 1150
Query: 167 PNEL 170
EL
Sbjct: 1151 GPEL 1154
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A M G NR ++ +++ WP+ L +DY + +YW D+ N +E+ +G
Sbjct: 784 KIERAEMDGSNRRSIINESVFWPNGLTLDYTSNRIYWADAKHNVIETALFNG 835
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++E A M G R L+T + WP+ L ID + LYW D+ L+T+ES + G ++
Sbjct: 1398 KIEVAQMDGTKRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLKGHDRKIIVT 1457
Query: 166 ---HPNEL 170
HP L
Sbjct: 1458 EAPHPYGL 1465
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL-----------EKAGMHGE 116
+L F + ++ V L A+ +L + D++L +A M+G
Sbjct: 647 TLLFANRIDIRQVSLSNAKYTPILKGLHNAIALDYHYDKKLIFWSDVSMDVIRRATMNGT 706
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+ ++ +Q P + +D+ D+++W DS +E +DG H A++
Sbjct: 707 EITDIIKWGLQSPGGVALDWIHDLIFWTDSGTRRIEVASLDGKHRAIIA 755
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D EI+ +D+ ++K+ G+N ++ +Q P + +D +YW D N+V
Sbjct: 1296 DRKTGEIYWIDQAEDVIQKSTRDGQNSKLIIMHKLQTPEGIAVDSTGRKIYWTDGERNSV 1355
Query: 152 ESVRVDGSHNAVLCHPN 168
E +DGS+ VL N
Sbjct: 1356 EVAELDGSNRKVLFSTN 1372
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 93 SWDLPAPEIFPLD-ER--LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+WD + IF D ER + +A +G N+ +V NI P+ L +D+ + +YW D+
Sbjct: 987 AWDSESDYIFWTDVERDTINRALWNGSNQEVIVYSNIVTPAGLALDWLTNKIYWTDADTT 1046
Query: 150 TVESVRVDGSHNAVLCHPN 168
+E + +G ++L N
Sbjct: 1047 RIEVAKTNGEMRSLLVWDN 1065
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN--TVESVRVDGSHNAVL 164
++E++ + G R L+ + + +P L ID+ LYW D+ LN +E+ + G + VL
Sbjct: 1702 KIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYWIDATLNEERIETSDLHGRNRVVL 1761
Query: 165 ----CHPNEL 170
HP L
Sbjct: 1762 DIPQTHPFSL 1771
>gi|189236723|ref|XP_001814959.1| PREDICTED: similar to AGAP000037-PA [Tribolium castaneum]
Length = 2041
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/338 (31%), Positives = 162/338 (47%), Gaps = 45/338 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNAECTPGQFSCGMGKCI 218
C +E C S C++LS CD + DCS+G DE P+CN G+F C +CI
Sbjct: 352 CSEDEFEC-SDESCISLSWKCDRQVDCSDGSDERDCDITPPYCNE----GEFECASKQCI 406
Query: 219 PESWKCDGFVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+KCDG DC + ++ C +G+ +C S KCIP + CD++ DC +
Sbjct: 407 KLKFKCDGDKDCDDWSDEDDCGKAPGNCVSGEFKCN-SGKCIPERYRCDKQQDCEEKE-- 463
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D + D+ C + C+ + CI W+CD DC + DE S
Sbjct: 464 DEANCDYSLARSCSPDEHTCS-NGACILKTWVCDGYNDCPQGE-----DE------SKCE 511
Query: 338 VLCHPNELRCG-------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSH 389
++C ++ C ++ C++ CDGK DC GEDE C K +CE + C+
Sbjct: 512 IVCDESKFSCSGHGINDTATEFCISRKHVCDGKKDCPKGEDESG-CPTKRECEKHTNCTQ 570
Query: 390 KCSPTPRGAM-CFCPAGQN--PNKTQCVDADECLI--DGSCDQTCTNTHLSYVCSCTEGY 444
C T G C C G + C D +ECL D C QTC NT S+ C C GY
Sbjct: 571 LCITTVDGRKGCDCIPGYKIASDGITCEDINECLYATDPVCSQTCNNTQGSFRCGCMTGY 630
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
LRPD ++C A+ +P +++F++ +DIR++ L+ +
Sbjct: 631 VLRPDLRTCKAIG----DPPTLLFANRIDIRQVSLSNA 664
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G RS +V+ N+ WP+ L ID++ +YW D +E DGS +
Sbjct: 1091 KIERAAMDGTMRSVIVSSNLTWPNGLAIDHSAGKIYWADGGTKAIECSNFDGSKRKTIIG 1150
Query: 167 P 167
P
Sbjct: 1151 P 1151
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A M G NR ++ +++ WP+ L +DY + +YW D+ N +E+ +G
Sbjct: 784 KIERAEMDGSNRRSIINESVFWPNGLTLDYTSNRIYWADAKHNVIETALFNG 835
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
++E A M G R L+T + WP+ L ID + LYW D+ L+T+ES + G ++
Sbjct: 1397 KIEVAQMDGTKRKALITDGLVWPNGLAIDRPTERLYWNDAKLHTIESSDLKGHDRKIIVT 1456
Query: 166 ---HPNEL 170
HP L
Sbjct: 1457 EAPHPYGL 1464
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 11/109 (10%)
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL-----------EKAGMHGE 116
+L F + ++ V L A+ +L + D++L +A M+G
Sbjct: 647 TLLFANRIDIRQVSLSNAKYTPILKGLHNAIALDYHYDKKLIFWSDVSMDVIRRATMNGT 706
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+ ++ +Q P + +D+ D+++W DS +E +DG H A++
Sbjct: 707 EITDIIKWGLQSPGGVALDWIHDLIFWTDSGTRRIEVASLDGKHRAIIA 755
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D EI+ +D+ ++K+ G+N ++ +Q P + +D +YW D N+V
Sbjct: 1295 DRKTGEIYWIDQAEDVIQKSTRDGQNSKLIIMHKLQTPEGIAVDSTGRKIYWTDGERNSV 1354
Query: 152 ESVRVDGSHNAVLCHPN 168
E +DGS+ VL N
Sbjct: 1355 EVAELDGSNRKVLFSTN 1371
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 93 SWDLPAPEIFPLD-ER--LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+WD + IF D ER + +A +G N+ +V NI P+ L +D+ + +YW D+
Sbjct: 987 AWDSESDYIFWTDVERDTINRALWNGSNQEVIVYSNIVTPAGLALDWLTNKIYWTDADTT 1046
Query: 150 TVESVRVDGSHNAVLCHPN 168
+E + +G ++L N
Sbjct: 1047 RIEVAKTNGEMRSLLVWDN 1065
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN--TVESVRVDGSHNAVL 164
++E++ + G R L+ + + +P L ID+ LYW D+ LN +E+ + G + VL
Sbjct: 1701 KIERSFLDGSGRRILINEQLSFPIGLAIDFVDKRLYWIDATLNEERIETSDLHGRNRVVL 1760
Query: 165 ----CHPNEL 170
HP L
Sbjct: 1761 DIPQTHPFSL 1770
>gi|195453846|ref|XP_002073970.1| GK14389 [Drosophila willistoni]
gi|194170055|gb|EDW84956.1| GK14389 [Drosophila willistoni]
Length = 1077
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/371 (31%), Positives = 155/371 (41%), Gaps = 73/371 (19%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C S +CV L+ CD DCS+G DE CN C +++CG G+CI
Sbjct: 263 CSPEEYGCKSGLGECVPLAWMCDQSKDCSDGSDEHN-CNQTCRSDEYTCGNGRCIQKRWV 321
Query: 219 -----------------------------------PESWKCDGFVDCLEDGSDEPN---- 239
+ W CDG DC D SDE +
Sbjct: 322 CDHDDDCGDGSDERDCPVIPCDAVAEHTCSNGACIAKRWVCDGDPDC-ADASDERSCSNV 380
Query: 240 -TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQ 296
+ C + QC C+ H+WLCD + DC D DE K C Q Q
Sbjct: 381 TKTVTPCLPHEYQCKDRITCLHHSWLCDGDRDCP-----DGDDEHTANCKNITCRPDQFQ 435
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCH-PNELRCGSSNQCV 354
C + CI + C+ + DCS D +DE + + N C+ + CG QC+
Sbjct: 436 CG-DRSCIAGHLTCNGDKDCS-----DGSDEKNCNFTVQANLQACNGTTQFNCGGG-QCI 488
Query: 355 ALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNK 410
ALSK CD + DC +GEDE G N+ +N C HKC G C C G + +K
Sbjct: 489 ALSKVCDKRKDCPDGEDEPAGKCGVNECATKNGNCMHKCLDLAVGHRCECHEGYKLSSDK 548
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFS 469
CVD +EC G C Q C N + C C GY P + C A + AS++ +
Sbjct: 549 RSCVDINECENPGMCSQICINEIGGFKCECEAGYMRDPRNHTRCKA----SEGHASLLLA 604
Query: 470 STVDIRRIHLN 480
DIR+I L+
Sbjct: 605 RRHDIRKIALD 615
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 138/346 (39%), Gaps = 66/346 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPESW 222
C NE +C + +QC+ CDG DC + DE + C+P ++ C G+G+C+P +W
Sbjct: 223 CPNNEFKCQTVDQCIPRDWLCDGSNDCRDKSDEAQCKSRTCSPEEYGCKSGLGECVPLAW 282
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK-------------------------- 256
CD DC DGSDE N C C + + C +
Sbjct: 283 MCDQSKDC-SDGSDEHN-CNQTCRSDEYTCGNGRCIQKRWVCDHDDDCGDGSDERDCPVI 340
Query: 257 -------------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
CI W+CD + DC+ + C + QC C
Sbjct: 341 PCDAVAEHTCSNGACIAKRWVCDGDPDCADASDERSCSNVTKTVTPCLPHEYQCKDRITC 400
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
+ H+WLCD + DC D D + + + C P++ +CG + C+A C+G
Sbjct: 401 LHHSWLCDGDRDCP--------DGDDEHTANCKNITCRPDQFQCGDRS-CIAGHLTCNGD 451
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF-----------CPAGQNPNKTQ 412
DCS+G DE CN C+ G C CP G++ +
Sbjct: 452 KDCSDGSDE-KNCNFTVQANLQACNGTTQFNCGGGQCIALSKVCDKRKDCPDGEDEPAGK 510
Query: 413 CVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C +EC +G+C C + + + C C EGY L D +SC +N
Sbjct: 511 C-GVNECATKNGNCMHKCLDLAVGHRCECHEGYKLSSDKRSCVDIN 555
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 102/253 (40%), Gaps = 63/253 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG+ DC + DE F A C+ F C G CIP
Sbjct: 140 CDEKQFQCLSGD-CIPIRFVCDGEDDCRDHSDEQVAECKFLEATCSSDHFRCTNGNCIPN 198
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC + + P C++ C N + +C +CIP +WLCD DC D +
Sbjct: 199 KWRCDQENDCADASDESPALCMNACPNNEFKCQTVDQCIPRDWLCDGSNDCR-----DKS 253
Query: 281 DEDWDKFHQCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN-AV 338
DE K C + C +C+P W+CD+ DCS D +DE HN
Sbjct: 254 DEAQCKSRTCSPEEYGCKSGLGECVPLAWMCDQSKDCS-----DGSDE-------HNCNQ 301
Query: 339 LCHPNELRCG---------------------------------------SSNQCVALSKF 359
C +E CG S+ C+A
Sbjct: 302 TCRSDEYTCGNGRCIQKRWVCDHDDDCGDGSDERDCPVIPCDAVAEHTCSNGACIAKRWV 361
Query: 360 CDGKPDCSNGEDE 372
CDG PDC++ DE
Sbjct: 362 CDGDPDCADASDE 374
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIP 260
+C QF C G CIP + CDG DC + ++ C C + +C + CIP
Sbjct: 139 KCDEKQFQCLSGDCIPIRFVCDGEDDCRDHSDEQVAECKFLEATCSSDHFRCT-NGNCIP 197
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
+ W CD+E DC+ D +DE + C N + +C +CIP +WLCD DC
Sbjct: 198 NKWRCDQENDCA-----DASDESPALCMNACPNNEFKCQTVDQCIPRDWLCDGSNDCR-- 250
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDE 372
D +DE K + C P E C S +CV L+ CD DCS+G DE
Sbjct: 251 ---DKSDEAQCK-----SRTCSPEEYGCKSGLGECVPLAWMCDQSKDCSDGSDE 296
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 738 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNIISSANYDGSQRRQILY 797
Query: 167 PNEL 170
E
Sbjct: 798 SMEY 801
>gi|410333803|gb|JAA35848.1| low density lipoprotein receptor [Pan troglodytes]
Length = 733
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/292 (33%), Positives = 133/292 (45%), Gaps = 28/292 (9%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQCA-L 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + QC+ CI + CD E
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPVATCRPDEFQCS-DGNCIHGSRQCDREY 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC D +DE N LC PN+ +C S +C+ L K C+ DC + DE
Sbjct: 133 DCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEP 182
Query: 374 PFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCT 430
+C N CSH C+ G C CP G Q + +C D DEC +C Q C
Sbjct: 183 IKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQHPDTCSQLCV 242
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 243 NLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 290
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 409 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 460
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 461 IDVNGGNRKTVLEDEKRLAHPFSL 484
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE A C P +F C G CI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPVATCRPDEFQCSDGNCIHG 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDC 271
S +CD DC +D SDE C++ + +C S +CI + +C+ DC
Sbjct: 125 SRQCDREYDC-KDMSDEVG-CVNVTLCEGPNKFKCH-SGECITLDKVCNMARDC 175
>gi|17298315|gb|AAL38107.1| candidate tumor suppressor protein [Homo sapiens]
Length = 881
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 135 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 195 AKIEPTDRPPILLIANFETIEVFYLNGS 222
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 651 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 710
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 711 WCDAYYDHIEKVFLNGTHRKIVYSGREL 738
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 135 STRCYCEDGF-EITEDG 150
>gi|432855199|ref|XP_004068121.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oryzias latipes]
Length = 993
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 144/331 (43%), Gaps = 35/331 (10%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+A C + +C + +C+ + CDG DC + DE + C +F C +CIP
Sbjct: 149 DAKACASKDFQC-RNGKCIGPTFVCDGDNDCGDSSDEEKCSSPTCGQHEFRCNNSECIPA 207
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH-------QCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
W CDG DC + + C +C G+ QC S +C+ NW CD + DC
Sbjct: 208 LWSCDGDPDCKDKSDESAERCSRGKEPQKPRCPVGEFQCG-SGECVHMNWKCDGDADCK- 265
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C + QC CI C++ DC D +DE
Sbjct: 266 ----DKSDEANCPLLTCRPDEFQCG-DGTCIHGTKQCNKVHDCP-----DYSDE----AG 311
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHK 390
N C P + RC + +C+ SK CD DC + DE P +C N CSH
Sbjct: 312 CVNITKCDGPRKFRC-KNGECIDSSKVCDNVKDCKDWSDEPPKECGLNECADNNGGCSHI 370
Query: 391 CSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G C CP+G +K C D DEC +C Q C N Y C C EGY + P
Sbjct: 371 CRDRRIGHECDCPSGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPA 430
Query: 450 GKSCTAV-NVPQDEPASIIFSSTVDIRRIHL 479
K+C AV N P ++F++ +IRRI L
Sbjct: 431 SKTCKAVGNSPY-----LMFTNRHEIRRIDL 456
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-CFNGQVQC-ALSKKCIPH 261
C F+C G+C+P W+CDG +C DGSDE + C Q C + C + KC+
Sbjct: 69 CATTDFTCKNGQCLPSKWRCDGEPECA-DGSDEADAICSRQTCPPEKFDCGGAASKCVSL 127
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD E DC + D C + QC + KCI ++CD + DC
Sbjct: 128 SWRCDGERDCENGADEEQCAAD---AKACASKDFQCR-NGKCIGPTFVCDGDNDCG---- 179
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D++DE+ ++ C +E RC +S +C+ CDG PDC + DE
Sbjct: 180 -DSSDEE-----KCSSPTCGQHEFRCNNS-ECIPALWSCDGDPDCKDKSDE 223
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVS-SVRLRCAQINDLLNSWDLPAPEIFPLD----- 105
L+ LA+++ H+N + + N S SV + +L + +L P +D
Sbjct: 514 LHSPEGLAVDWVHKN--IYWTDSGNKSISVATGDGRKRKVLIATELSEPRAIAVDPHQGF 571
Query: 106 ---------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
++EKAGM+G +R LV+ +I+WP+ + +D + LYW DS L+ + SV +
Sbjct: 572 MYWSDWGEHAKIEKAGMNGVDRQVLVSDHIEWPNGITLDLSNRRLYWVDSKLHLLSSVDL 631
Query: 157 DGSHNAVL 164
G + VL
Sbjct: 632 SGGNRKVL 639
>gi|341886248|gb|EGT42183.1| hypothetical protein CAEBREN_28659 [Caenorhabditis brenneri]
Length = 465
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 145/354 (40%), Gaps = 60/354 (16%)
Query: 145 DSHLNTVESVRVDGSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
DS + + S + S N +C+ N+ RC + +C+ CDG DCS+GEDE +
Sbjct: 33 DSPPSVLRSRIISASVNTASSVCNENDFRC-NDGKCIRAEWKCDGSGDCSDGEDEKDCPH 91
Query: 203 AECTPGQFSCGMG-----KCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCAL 254
C Q+ C CI E +CD DC DGSDE P + + CA
Sbjct: 92 PGCKSDQWQCDTYTWHSVSCIAEYQRCDNITDCA-DGSDEKDCPASTVDCSSPNVFMCAD 150
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
++C CD + DC D+ D D CF Q +CA +CI +W+CD
Sbjct: 151 GRQCFDMTKKCDGKYDCR--DLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSK 208
Query: 315 DCS-----------------------------------TDDIVDNTDEDWDKYFSHNAVL 339
DC+ DD DN+DE+
Sbjct: 209 DCADGSDEPETCEFKKCTANEFQCKNKRCQPRKFRCDYYDDCGDNSDEE-----ECGEYR 263
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C P + C + C+ K CDG DC++G DE N C +L C C P+P G
Sbjct: 264 CPPGKWNCPGTGHCIDQLKLCDGSKDCTDGADEQQCSQNL--CPSLGCQAGCHPSPHGGE 321
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCT-EGYTLRPD 449
C CP+G + C D +EC G CDQ C N + CSC + +TL+ D
Sbjct: 322 CTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSCLGDCFTLQMD 375
>gi|213626895|gb|AAI70345.1| Low density lipoprotein receptor-1 [Xenopus laevis]
Length = 909
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 153/371 (41%), Gaps = 72/371 (19%)
Query: 163 VLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C ++ CG N+C+ +S CDG+ DC NG DE + C QF+C GKCI
Sbjct: 66 VTCGTDQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTHKVCADDQFTCRSGKCISLD 125
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+ CD +DC +DGSDE C QC CIP W CD + DC D +D
Sbjct: 126 FVCDEDLDC-DDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE-----DGSD 179
Query: 282 EDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E+ + + C+ S +CI +W CD DC D +DE
Sbjct: 180 EEHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGFDCK-----DKSDEK-----DC 229
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP----------- 374
C P++ +C + C+ S+ CD + DC + D EGP
Sbjct: 230 VKPTCRPDQFQC-NDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECI 288
Query: 375 ----FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAGQN-PNKT 411
CN K DC N CSH C+ G C C G ++
Sbjct: 289 TMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQK 348
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
+C D +EC +C Q C N Y C C EGY + P SC ++ A + F++
Sbjct: 349 RCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIGT----VAYLFFTNR 404
Query: 472 VDIRRIHLNGS 482
++R++ L+ S
Sbjct: 405 HEVRKMTLDRS 415
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 151/362 (41%), Gaps = 75/362 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
H++ + +R C NE +CG +C+ CDG +C + DE P E T
Sbjct: 17 HVSAISGIRK--------CDRNEFQCGDG-KCIPYKWICDGSAECKDSSDESPETCREVT 67
Query: 207 PG--QFSCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
G QFSCG + +CIP SWKCDG DC E+GSDE N C H+ C + Q C S KCI
Sbjct: 68 CGTDQFSCGGRLNRCIPMSWKCDGQTDC-ENGSDE-NDCTHKVCADDQFTCR-SGKCISL 124
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+++CDE++DC D +DE + C QC CIP W CD + DC
Sbjct: 125 DFVCDEDLDCD-----DGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE---- 175
Query: 322 VDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------- 372
D +DE+ + C P E CG S +C+ +S CDG DC + DE
Sbjct: 176 -DGSDEEHCEGREPIKTDKPCSPLEFHCG-SGECIHMSWKCDGGFDCKDKSDEKDCVKPT 233
Query: 373 ----------------GPFCNNKADCENLKCSHKCSPTP----------RGAMCFCPAGQ 406
C+ + DC++L C R C
Sbjct: 234 CRPDQFQCNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKV 293
Query: 407 NPNKTQCVD----------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
K C D +ECL +G C C + + Y C C EGY L D K C
Sbjct: 294 CNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV-DQKRCED 352
Query: 456 VN 457
+N
Sbjct: 353 IN 354
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT+NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ V G + +
Sbjct: 586 IDVTGENRRTV 596
>gi|195479052|ref|XP_002100747.1| GE17236 [Drosophila yakuba]
gi|194188271|gb|EDX01855.1| GE17236 [Drosophila yakuba]
Length = 2009
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 161/365 (44%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC D SDE
Sbjct: 279 CIPRTWVCDGENDCKDFSDETHCNRTTCTDEHFTCNDGYCISLAFRCDGEHDC-NDNSDE 337
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 338 LKCAAVINSCPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 392
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +CA CIP W CD+E DC + + D S + + C +E
Sbjct: 393 KPSLCTSNEYKCA-DGTCIPKRWKCDKEQDCDGGE----DENDCGSVGSEHPLTCGSDEF 447
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK-CSH----- 389
C ++ +C+ + CDG PDC+ GEDE G F C K + NLK C H
Sbjct: 448 TC-NNGRCILKTWLCDGYPDCAAGEDEVECHLQCDLGQFLCPTKQNLTNLKICVHQKHIC 506
Query: 390 -------------------KCS-PTPRGAMCF-CPAGQN-----------PNKTQCVDAD 417
KCS P+P +C AG N NK C D D
Sbjct: 507 DGHNECPAGEDEADCPKERKCSEPSPCEQLCIETNAGLNECACRLGYVMDKNKVNCTDID 566
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S+ CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 567 ECQYLTSPVCSQKCHNTMGSFKCSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 622
Query: 476 RIHLN 480
R+ L+
Sbjct: 623 RVTLS 627
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLC 165
++E+A M G R +++K + WP+ L ID+ LYW D+ + +E +DGS N +L
Sbjct: 749 KIERAYMDGTQRKVIISKGVTWPNGLAIDFPNSKLYWADAKQHAIECSNLDGSDRNKILS 808
Query: 166 ----HPNEL 170
HP L
Sbjct: 809 THLPHPFAL 817
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E++ + G RS +VT N+ WP+ L +D +YW D+ L T++S G+ +
Sbjct: 1366 RKIERSHLDGNERSRIVTANLGWPNGLSLDLKSKRIYWVDARLKTIDSCDYTGNQRKLIM 1425
Query: 164 --LCHPNELRCGSSN 176
L HP L N
Sbjct: 1426 SSLHHPYALALSDDN 1440
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
D +E+A M G R + +K + +P+ L IDY + +Y+ D T+E++ DGS V
Sbjct: 1061 DPMIERANMDGHERVTITSKKLIYPNGLAIDYEKSKIYFVDGGTKTLENMNFDGSGRQVI 1120
Query: 164 ---LCHPNEL 170
L HP L
Sbjct: 1121 LNGLGHPFGL 1130
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A + G NR + K+++ P L +DY +L+W D H +E +DG+ + +
Sbjct: 1324 IEVASLDGSNRHVIAYKDLESPRGLALDYEAGLLFWTDWGHYRKIERSHLDGNERSRIVT 1383
Query: 167 PN 168
N
Sbjct: 1384 AN 1385
>gi|378405184|sp|P35950.2|LDLR_CRIGR RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|344240074|gb|EGV96177.1| Low-density lipoprotein receptor [Cricetulus griseus]
Length = 862
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 153/375 (40%), Gaps = 75/375 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C E CG ++C+ S CDG+ DC NG DE C+ +F C GKCI +
Sbjct: 65 SVTCQSKEFSCGGRVSRCIPNSWRCDGQTDCENGSDEQGCAPKTCSQDEFRCQDGKCISQ 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------------------- 254
+ CD DC+ DGSDE + C +C
Sbjct: 125 KFVCDQDQDCV-DGSDEAHCQAATCGPAHFRCNSSACIPSLWACDGDDDCEDGSDEWPQN 183
Query: 255 -----------------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
S +CI +W+CD DC D +DE+ C
Sbjct: 184 CGGRDTAAAWSSSPCSSLEFHCGSSECIHRSWVCDGSADCK-----DKSDEEHCVTATCR 238
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
+ QCA CI + CD E DC D +DE N C PN+ +C S
Sbjct: 239 PDEFQCA-DGTCIHGSRQCDREYDCK-----DMSDE----LGCINVTQCDGPNKFKC-HS 287
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QN 407
+C+AL K CD DC + DE +C N CSH C G C CP G Q
Sbjct: 288 GECIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL 347
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
++ +C D DEC +CDQ C N SY C C G+ + P + C AV A ++
Sbjct: 348 VDQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG----SVAYLL 403
Query: 468 FSSTVDIRRIHLNGS 482
F++ ++R++ L+ S
Sbjct: 404 FTNRHEVRKMTLDRS 418
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE RC +C+A CDG P+C +G DE + C +FSCG + +CIP
Sbjct: 27 CDRNEFRC-RDGKCIASKWVCDGSPECPDGSDESSETCMSVTCQSKEFSCGGRVSRCIPN 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE C + +C KCI ++CD++ DC VD +
Sbjct: 86 SWRCDGQTDC-ENGSDEQGCAPKTCSQDEFRCQ-DGKCISQKFVCDQDQDC-----VDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVL 339
DE + C +C S CIP W CD + DC + D + ++
Sbjct: 139 DEAHCQAATCGPAHFRCN-SSACIPSLWACDGDDDCEDGSDEWPQNCGGRDTAAAWSSSP 197
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E CGSS +C+ S CDG DC + DE
Sbjct: 198 CSSLEFHCGSS-ECIHRSWVCDGSADCKDKSDE 229
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 29/169 (17%)
Query: 21 HNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLC 70
++ L D+ S D I+ D DW + Y+ + G+ ++A R ++L
Sbjct: 453 YSALMDQAPTLSYDTIISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTL- 511
Query: 71 FIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQW 128
Q++ + ++ + W PA +++K G++G + LVT++IQW
Sbjct: 512 -FQEKGSRPRDIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVTEDIQW 562
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
P+ + +D LYW DS L+++ S+ V+G + L HP L
Sbjct: 563 PNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSL 611
>gi|1389559|gb|AAB02882.1| glycoprotein 330, partial [Homo sapiens]
Length = 1751
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/408 (28%), Positives = 168/408 (41%), Gaps = 103/408 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+++
Sbjct: 118 CQSGYPKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQTF 177
Query: 223 K-CDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CD DC D SDEP++C H C + + +C +CIP+ W+CD + DC D
Sbjct: 178 GICDQETDCF-DASDEPSSCGHSERTCLSDEFKCD-GGRCIPNEWICDGDNDCG-----D 230
Query: 279 NTDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCST--DDIVDNTDE 327
+DE DK HQC N + C ++CIP +W D ++DC+ D+I + T
Sbjct: 231 MSDE--DKRHQCQNQNCSDSEFPCVNDRPPDRRCIPQSWPPDGDVDCTDGHDEIQNCTRR 288
Query: 328 D-WDKYFSHNAVLCHPNELRCGSSN--------------------------QCVALSKFC 360
+ F+ LC P RC N +C++ + C
Sbjct: 289 TCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISKTFVC 348
Query: 361 DGKPDCSNGEDE---------------------------GPFCNNKADCEN--------- 384
D DC +G DE CN+ DC +
Sbjct: 349 DEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEKGCGI 408
Query: 385 --------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTH 433
C H C+ T C C G +K CVD DEC + C Q C N
Sbjct: 409 NECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKCENVI 468
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 469 GSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 513
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 19/228 (8%)
Query: 151 VESVRVDGSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPG 208
++++ GS + +C + C ++ +C+ + CDG+ DCS+G DE C C G
Sbjct: 794 FRTLQLSGSTYCMPMCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLG 853
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCD 266
QF C G C C+ +C DGSDE H C + + QCA +K+CIP +W CD
Sbjct: 854 QFQCSDGNCTSPQTLCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCD 911
Query: 267 EEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
DC DN+DED C GQ +CA + +CIP W CD + DC D+
Sbjct: 912 SFNDCE-----DNSDEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DH 960
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE ++ S + + E C ++ +C+ C+G DC + DE
Sbjct: 961 SDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 1008
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 157/410 (38%), Gaps = 109/410 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 585 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 641
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 642 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 693
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 694 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 753
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 754 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 811
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 812 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 869
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 870 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDSFNDCE-----D 918
Query: 324 NTDEDWDKYFSHNAV-LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED SH A C P + RC ++ +C+ + CD DC + DE
Sbjct: 919 NSDED----SSHCASRTCRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 963
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/365 (26%), Positives = 140/365 (38%), Gaps = 61/365 (16%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 1016 CHPVGDFRC-KNHHCIPLRWKCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 1074
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD + D D SDE + + C QC + + CD DC +D +DE
Sbjct: 1075 CDHYNDLWGDNSDERDCEMRTCHPEYFQCTSGHR-VHSELKCDGSADC-----LDASDEA 1128
Query: 284 ----------------------------W-------------DKFHQCFNGQVQCALSKK 302
W ++ H C + +
Sbjct: 1129 DCPTRFPDGAYCQATMFECKNHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRFR 1188
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C + + E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 1189 CDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCDD 1247
Query: 363 KPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDAD 417
DC + DE G + C C C+ G +C C AG N +T C+D +
Sbjct: 1248 ADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDIN 1307
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDIR 475
EC G+C Q C NT SY C C +G+T D GK C A + ++ V IR
Sbjct: 1308 ECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRIR 1363
Query: 476 RIHLN 480
+ +L+
Sbjct: 1364 KYNLS 1368
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 95/207 (45%), Gaps = 14/207 (6%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCL 231
S+ +C++ CD C +G DE A C+P F+C G+C+ S++CD + DC
Sbjct: 4 SNGRCISEEWKCDNDNGCGDGSDEMESVCALHTCSPTAFTCANGRCVQYSYRCDYYNDC- 62
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
DGSDE C +++CIP ++C+ +C ++ +DE C
Sbjct: 63 GDGSDETGCLFRDCNATTEFMCNNRRCIPREFICNGVDNCHDNNT---SDEKNCPDRTCQ 119
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+G +C S CIP +LCD + DC DN+DE+ +H C +E +C S
Sbjct: 120 SGYPKCHNSNICIPRVYLCDGDNDCG-----DNSDENPTYCTTHT---CSSSEFQCASGR 171
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNN 378
CD + DC + DE C +
Sbjct: 172 CIPQTFGICDQETDCFDASDEPSSCGH 198
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 107/251 (42%), Gaps = 55/251 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 891 CDSNEWQC-ANKRCIPESWQCDSFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 949
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP + H C N + C + +CIP +C+ DC
Sbjct: 950 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 1008
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
+D DN+DE+ +C + +C ++++
Sbjct: 1009 QGCEERTCHPVGDFRCKNHHCIPLRWKCDGQNDCGDNSDEENCAPRECTESEFRC-VNQQ 1067
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD D DN+DE CHP +C S ++ + K CDG
Sbjct: 1068 CIPSRWICDH----YNDLWGDNSDER-----DCEMRTCHPEYFQCTSGHRVHSELK-CDG 1117
Query: 363 KPDCSNGEDEG 373
DC + DE
Sbjct: 1118 SADCLDASDEA 1128
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSKKCIPHNWLCDE 267
F+C G+CI E WKCD C DGSDE + +H C CA + +C+ +++ CD
Sbjct: 1 FTCSNGRCISEEWKCDNDNGC-GDGSDEMESVCALHTCSPTAFTCA-NGRCVQYSYRCDY 58
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC D +DE F C +++CIP ++C+ +C ++ D +
Sbjct: 59 YNDCG-----DGSDETGCLFRDCNATTEFMCNNRRCIPREFICNGVDNCHDNNTSDEKN- 112
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +C +SN C+ CDG DC + DE P
Sbjct: 113 -------CPDRTCQSGYPKCHNSNICIPRVYLCDGDNDCGDNSDENP 152
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPL--------------DERLEKAGM 113
I +V + R+ A+++ W DL P + + +LE A M
Sbjct: 1454 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKLESAWM 1513
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+ + LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 1514 NGEDPNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 1565
>gi|242018517|ref|XP_002429721.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
gi|212514727|gb|EEB16983.1| low-density lipoprotein receptor, putative [Pediculus humanus
corporis]
Length = 4603
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 161/361 (44%), Gaps = 44/361 (12%)
Query: 156 VDGSHNA------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE--DEGPFCN-AECT 206
VDGS + C+ ++ C + +C+ S CD DC + DE C +EC
Sbjct: 782 VDGSDESPERCKNTTCNSSQFLCEITGRCIPYSWTCDSDFDCGENDTSDEHANCKGSECL 841
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG-QVQCALSKKCIPHNWLC 265
+F CG C+P + CDG DC DGSDE +C C N ++ C C+P + C
Sbjct: 842 ANEFVCGDVHCVPVEFVCDGDNDC-RDGSDE-KSCGEICGNSSEIYCPAEGICLPLSKKC 899
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQ------------CFNGQVQCALSKKCIPHNWLCDEE 313
+ +DCS + + D+ + C + + +C + +C+ N++CD
Sbjct: 900 NGVIDCSDESDEQKCENGGDQKSKTVNRPANGFAVFCSSHEFKCWNNIECVRKNFVCDGR 959
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLC-----------HPNELRCGSSNQCVALSKFCDG 362
DC N E + S + P+ C + +C+ +S+ CD
Sbjct: 960 NDCLDGSDEKNCTEIHNCTESGTCFITPPTPTPSFECEQPSHRLCDNGTKCIKVSQLCDN 1019
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL 420
K DCS+G DEG C + CSH C P G +C+CP G + P+ T C ++ C
Sbjct: 1020 KKDCSDGSDEGLRCEEQLCSFTSHCSHYCQNAPNGFVCYCPKGLHLQPDSTTCSESHPCE 1079
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN--VPQDEPASIIFSSTVDIRRIH 478
G C Q C + C C + + L+PDG +C + + +PQ +IFS+ ++R +
Sbjct: 1080 SWGVCSQYCIPLKNKHKCKCEDDHLLQPDGFTCKSKDGAIPQ-----VIFSNRHELRGVE 1134
Query: 479 L 479
L
Sbjct: 1135 L 1135
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 148/325 (45%), Gaps = 55/325 (16%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCI 259
C C QF CG G+CIP +W+CD DC D SDE C ++ C +C + +CI
Sbjct: 2626 CTYSCRKDQFKCGQGECIPLTWQCDSTPDC-SDHSDEDTNCQNRTCPLSYFKCNSTGRCI 2684
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCI---------- 304
P W+CD E DC+ D +DE D+ H C QC L+ +CI
Sbjct: 2685 PKKWVCDSEPDCT-----DGSDEQVDQGCSPSNHTCSLNMFQC-LNHRCIDEDLYCDGDD 2738
Query: 305 -----------------PHNWLC------DEEMDCSTD-DIVDNTDEDWDKYFSHNAVLC 340
P ++ C ++ + C+ + D +DN+DE+ + ++ +C
Sbjct: 2739 DCGDGSDEQTSCLPLCSPDHFRCKIGLCINKSLICNGENDCIDNSDEELAE-CANKTFVC 2797
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+P + CV C+G+ DC + DE N+ + CSH C G C
Sbjct: 2798 NPETHFECRNKICVEEYLLCNGQDDCGDFSDEIKCNINECHQDPPPCSHICIDKKVGFEC 2857
Query: 401 FCPAGQNPNK---TQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C G N+ + C D +EC L + C Q C NT S+VCSC GY L+ DG+SC
Sbjct: 2858 KCKEGFKVNENDTSLCRDINECELPEKPCSQFCRNTLGSFVCSCDVGYALKADGRSCKVN 2917
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + + +IF++ IR I+ NG
Sbjct: 2918 STIEPK---LIFTNFHYIREINFNG 2939
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 138/295 (46%), Gaps = 39/295 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNAE-CTPGQFSCGMGKCIPES 221
C E +C S++CV CDG+ DC +G DE P C C +F C +CI
Sbjct: 713 CKETEFQCLDSHRCVNRKFICDGEKDCGDGSDEDPKGVCAVRSCNDDEFKCDGNRCIKSF 772
Query: 222 WKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CDG DC+ DGSDE P C + C + Q C ++ +CIP++W CD + DC + D
Sbjct: 773 WACDGDRDCV-DGSDESPERCKNTTCNSSQFLCEITGRCIPYSWTCDSDFDCGEN---DT 828
Query: 280 TDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE + K +C + C C+P ++CD + DC D +DE S +
Sbjct: 829 SDEHANCKGSECLANEFVCG-DVHCVPVEFVCDGDNDCR-----DGSDEK-----SCGEI 877
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
+ +E+ C + C+ LSK C+G DCS+ DE C N D + S + G
Sbjct: 878 CGNSSEIYCPAEGICLPLSKKCNGVIDCSDESDEQK-CENGGD----QKSKTVNRPANGF 932
Query: 399 MCFCPAGQNP--NKTQCV------DADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
FC + + N +CV D +DGS ++ CT H +CTE T
Sbjct: 933 AVFCSSHEFKCWNNIECVRKNFVCDGRNDCLDGSDEKNCTEIH-----NCTESGT 982
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 104/217 (47%), Gaps = 21/217 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C + C S+ QC+ CD + DC++G DE C C PGQF C +CI
Sbjct: 3231 CTSSHFVCNSTYQCIPFWWRCDTQEDCADGSDEPEHCPEFTCLPGQFQCNNSRCIHPIEI 3290
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQC----ALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC DGSDE + + C N Q++C + +CIP C+ +DC V
Sbjct: 3291 CDGETDCF-DGSDERDCNQYTCMNTQIKCKGNDTIQDRCIPSTKRCNGVVDCP----VHG 3345
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DE C Q C + KCIP WLCDE+ DC DN+DE +Y +
Sbjct: 3346 EDEADCPNETCSENQFTCN-NGKCIPLVWLCDEDDDCQ-----DNSDE--GEYCAKRT-- 3395
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C +C S+ +C+ S CDG DC NGEDE P C
Sbjct: 3396 CPSGHFKC-SNGRCIPSSWNCDGDADCPNGEDEPPEC 3431
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 106/238 (44%), Gaps = 40/238 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWK 223
C N+ C ++ +C+ L CD DC + DEG +C C G F C G+CIP SW
Sbjct: 3356 CSENQFTC-NNGKCIPLVWLCDEDDDCQDNSDEGEYCAKRTCPSGHFKCSNGRCIPSSWN 3414
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC +G DEP C H C +CA + CIP W CD + DC DN+DE
Sbjct: 3415 CDGDADC-PNGEDEPPECAHHSCEPSYFKCA-NYLCIPGRWRCDYDNDCG-----DNSDE 3467
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN------------------ 324
C + +C + KCI + CD E +C +D+ D
Sbjct: 3468 MNCTMRNCSESEFRCG-NGKCIRGLYRCDGEYNC--EDLSDELNCNATCLPGEPCYKSIG 3524
Query: 325 --------TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+ED S+ V C PN+ C + QC+ CDG DCS+G DE P
Sbjct: 3525 CNSSDPNCKEEDATCVGSNCTVSCLPNQFSC-KNKQCIESIWKCDGDHDCSDGSDEDP 3581
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 129/282 (45%), Gaps = 41/282 (14%)
Query: 161 NAVLCHPNELRCGSSN----QCVALSKFCDGKPDCS-NGEDEGPFCNAECTPGQFSCGMG 215
N C +++C ++ +C+ +K C+G DC +GEDE N C+ QF+C G
Sbjct: 3307 NQYTCMNTQIKCKGNDTIQDRCIPSTKRCNGVVDCPVHGEDEADCPNETCSENQFTCNNG 3366
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
KCIP W CD DC +D SDE C + C +G +C+ + +CIP +W CD + DC
Sbjct: 3367 KCIPLVWLCDEDDDC-QDNSDEGEYCAKRTCPSGHFKCS-NGRCIPSSWNCDGDADCPNG 3424
Query: 275 DIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+ DE + H C +CA + CIP W CD + DC DN+DE
Sbjct: 3425 E-----DEPPECAHHSCEPSYFKCA-NYLCIPGRWRCDYDNDCG-----DNSDE-----M 3468
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+ C +E RCG+ +C+ CDG+ +C + DE L C+ C P
Sbjct: 3469 NCTMRNCSESEFRCGNG-KCIRGLYRCDGEYNCEDLSDE------------LNCNATCLP 3515
Query: 394 TPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLS 435
G C+ G N + C + D + +C +C S
Sbjct: 3516 ---GEPCYKSIGCNSSDPNCKEEDATCVGSNCTVSCLPNQFS 3554
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 136/361 (37%), Gaps = 119/361 (32%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-------------NAECTPG--- 208
C +C S+ +C+ S CDG DC NGEDE P C N C PG
Sbjct: 3396 CPSGHFKC-SNGRCIPSSWNCDGDADCPNGEDEPPECAHHSCEPSYFKCANYLCIPGRWR 3454
Query: 209 ------------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----- 239
+F CG GKCI ++CDG +C ED SDE N
Sbjct: 3455 CDYDNDCGDNSDEMNCTMRNCSESEFRCGNGKCIRGLYRCDGEYNC-EDLSDELNCNATC 3513
Query: 240 -----------------------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C C Q C +K+CI W CD + D
Sbjct: 3514 LPGEPCYKSIGCNSSDPNCKEEDATCVGSNCTVSCLPNQFSCK-NKQCIESIWKCDGDHD 3572
Query: 271 CSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
CS D +DED C GQ +C+ CI N+LCD DC DN+DE+
Sbjct: 3573 CS-----DGSDEDPKMCAVMPCEIGQHRCS-KNICISKNYLCDGRDDCG-----DNSDEN 3621
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---FCNNKADCENL 385
K F +C ++ RCG+ + C++L CDG DC + DEG + + + EN
Sbjct: 3622 --KEFCLAEGICPADQFRCGNGD-CISLKLRCDGFNDCGDNSDEGNCQFYTSKRCALENK 3678
Query: 386 KCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CS N K C GSC Q C SY C C +GYT
Sbjct: 3679 NCSD----------------LNQKKHYCSF-------GSCSQKCIEKKNSYSCQCEKGYT 3715
Query: 446 L 446
L
Sbjct: 3716 L 3716
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+KC +KC+ +P G C+C G C+D DEC I+GSCDQ C NT S+ CSC GY
Sbjct: 1 MKCPYKCTMSPSGPQCYCEKGLKYVNNSCIDLDECEIEGSCDQICRNTQGSFSCSCVNGY 60
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
T R G C A NVP +EP S+++SS+ DI I+LNGS
Sbjct: 61 TER--GVRCFAQNVPPEEPPSLLYSSSSDIGLIYLNGS 96
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 142/358 (39%), Gaps = 99/358 (27%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------- 159
++E+A ++G+ R +++N WPS L D+ D+LYWCD+ L +E + +D +
Sbjct: 542 KIERALLNGDEREVFISENTLWPSGLTFDFTNDVLYWCDAFLEVIERINLDRTGRRKIFS 601
Query: 160 ------------HNAVLCHPNELRCGSSN----------QCVALSKFC--DGKPDCSNGE 195
HN L + E + GS N + +A K+ + K N +
Sbjct: 602 DLKTDHPYGLAYHNNFL-YWTEFQKGSINRLHLTKNMTKEILASEKYMLFEVKIYDKNSQ 660
Query: 196 DEGPFC---NAECTPGQFSCGMGKCIPESWKC---DGFV----DCLEDGSDEPNTCIHQC 245
+E C N +C FS +P +C D + C+ D S + +C
Sbjct: 661 NETSDCSVRNGDCEELCFS------LPNKIQCSCSDNYTMKNGKCVPDVSTTSRV-LPKC 713
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTD------------------------------- 274
+ QC S +C+ ++CD E DC
Sbjct: 714 KETEFQCLDSHRCVNRKFICDGEKDCGDGSDEDPKGVCAVRSCNDDEFKCDGNRCIKSFW 773
Query: 275 ------DIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
D VD +DE + K C + Q C ++ +CIP++W CD + DC +D
Sbjct: 774 ACDGDRDCVDGSDESPERCKNTTCNSSQFLCEITGRCIPYSWTCDSDFDCGENDTS---- 829
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNNKAD 381
D++ + C NE CG CV + CDG DC +G DE G C N ++
Sbjct: 830 ---DEHANCKGSECLANEFVCGDV-HCVPVEFVCDGDNDCRDGSDEKSCGEICGNSSE 883
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 108/288 (37%), Gaps = 72/288 (25%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE--CTPGQFSCGMGKCIPESWKCDG 226
+C S C+ CD C +G DE +C A C G + C +CIP + CD
Sbjct: 2418 FKCSSHGTCIPFELTCDDVKHCEDGSDEFITYCGASRVCHEGYYKCANNRCIPNASVCDL 2477
Query: 227 FVDCLEDGSDEPNTCI------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
DC D SDE C +C NGQ CI N+ CD E DC D +
Sbjct: 2478 INDC-GDNSDEYENCSCSKQDQFKCANGQ--------CISKNYRCDMESDCR-----DAS 2523
Query: 281 DEDWDKFHQCF------------NGQVQCALSKKCIPHNWLCDEEMDC--------STDD 320
DE H+C + C + CI +W+CD + DC T +
Sbjct: 2524 DEIGCPPHECLGIPNLGLNLNSSKQWIPCNYTTACILSSWICDGQNDCWDNSDEENCTKE 2583
Query: 321 IVDNTDED-WDKYFS-------------------------HNAVL-CHPNELRCGSSNQC 353
+ DN ++ K F HN C ++ +CG +C
Sbjct: 2584 VTDNKSKECGGKQFKCNNGQCINITWRCDGDNDCDDGTDEHNCTYSCRKDQFKCGQG-EC 2642
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMC 400
+ L+ CD PDCS+ DE C N+ KC+ P+ +C
Sbjct: 2643 IPLTWQCDSTPDCSDHSDEDTNCQNRTCPLSYFKCNSTGRCIPKKWVC 2690
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 122/318 (38%), Gaps = 60/318 (18%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+W+ AP I +++ ++G ++ NI+ P+++ +D+ LYW D+ L+ +E
Sbjct: 2230 NWNHQAPSI-------QRSFLNGYMVQSIIKTNIRMPNAITLDFMAMKLYWSDARLDKIE 2282
Query: 153 SVRVDGSHNAVLC-----HPNELRCGSS---------NQCVALSKFCDGKPDCSNGEDEG 198
DG++ VL HP ++ + + V +K +
Sbjct: 2283 RCETDGTNRVVLSNTSPQHPFDMAVHGNYLFWTDWVLHAVVRANKLTGEDVHYLRKDIPR 2342
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCD--------GFVDC-----LEDGSDEPNTCIHQC 245
P C C+ + C+ GFV C E + P C+
Sbjct: 2343 PMGIVAVHDDTAKCHNNPCLIANGGCEDKCNLDASGFVICSCFSGREVLAHNPKRCVEAV 2402
Query: 246 F----------NGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
NG+ +C+ CIP CD+ C +D D C G
Sbjct: 2403 VDVYENGTCDENGKHFKCSSHGTCIPFELTCDDVKHC--EDGSDEFITYCGASRVCHEGY 2460
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CA + +CIP+ +CD DC DN+DE N ++ +C ++ QC+
Sbjct: 2461 YKCA-NNRCIPNASVCDLINDCG-----DNSDE------YENCSCSKQDQFKC-ANGQCI 2507
Query: 355 ALSKFCDGKPDCSNGEDE 372
+ + CD + DC + DE
Sbjct: 2508 SKNYRCDMESDCRDASDE 2525
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 67/176 (38%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIND------------------------- 89
TL+L+F+HRN+S+C++++ N ++ +C +++
Sbjct: 106 VQTLSLDFDHRNRSVCYVRR-NSTNPSFKCVSLDNFEKSWDLPKSIMFPLHSKTHLVLDW 164
Query: 90 LLNSW--------------------------DLPAPEIFPLDER---------------L 108
L +W DL P+ LD L
Sbjct: 165 LTGNWYFLDDSREMIFLCNSTLKSCTIICDSDLSRPKGITLDPTKGFLFFTKWSDDAAVL 224
Query: 109 EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
E+A + G R LV K I +P L +D+ + +YW D++L+ +E + DG + V+
Sbjct: 225 ERALLDGTQRLVLVDKKIVYPYGLTVDFPSEHIYWVDTYLDVIERIDYDGKNRKVI 280
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 3/63 (4%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
FP ++E++ M G +R +V+K++ PS + IDY +LY+ D+ LNT+ESV +G +
Sbjct: 4000 FP---KIERSFMDGSHRKLVVSKDVVCPSGISIDYPSSVLYFVDTKLNTLESVDFNGDNR 4056
Query: 162 AVL 164
V+
Sbjct: 4057 MVV 4059
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 107 RLEKAGMHGENRSPLV---TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E + + G NR LV + +I + + +D LYWCDS L+ +E V+ DGS +
Sbjct: 1903 RIECSALDGSNRMVLVNDTSGSISTINDIALDLETKHLYWCDSALDKIERVKYDGSERTL 1962
Query: 164 L 164
L
Sbjct: 1963 L 1963
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
L + ++Q P L +D+ LYWCD L+T+E ++DG + VL + N
Sbjct: 2988 LHSASLQNPDGLAVDWVGRNLYWCDKVLDTIEVSKLDGRYRRVLINKN 3035
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLN 149
WD AP R+E+ M G NR ++ + WP+ L +DY +YW D+ +
Sbjct: 1258 WDAHAP-------RIERCSMSGTNRKRVLRVDQITDGAWPNGLTLDYVLRRIYWIDARSD 1310
Query: 150 TVESVRVDG-SHNAVL 164
++ + DG H V+
Sbjct: 1311 SIHTTTYDGLMHKEVI 1326
>gi|395843329|ref|XP_003794441.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Otolemur garnettii]
Length = 2335
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 153/530 (28%), Positives = 215/530 (40%), Gaps = 96/530 (18%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
C G C+ +++C+PH+ LCD E DC DN+DE L+ +
Sbjct: 286 RSCRRGFKPCS-NRRCVPHSKLCDGENDCG-----DNSDE---------LDCKVSTCATV 330
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
R I + + + CA +D N + + L ++ AG N + L
Sbjct: 331 EFRCADGTCIPRSARCNQNIDCADASDEKNCNNTDCTHFYKLG--VKTAGFIRCNSTSLC 388
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALS 182
+ + D + D + D V+ N C N C S +C+ +
Sbjct: 389 VL-----PTWICDGSNDCGDYSDELKCPVQ--------NKHKCEENYFGC-PSGRCILNT 434
Query: 183 KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC- 241
CDG+ DC +G DE C++ C+ QF+C KCI W CDG DC DG DE ++
Sbjct: 435 WICDGQKDCEDGLDEF-HCDSSCSWNQFACSAQKCISRHWICDGEDDC-GDGLDESDSIC 492
Query: 242 -IHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKFHQCFNG 293
C C S C+P +WLCD E DC ST N D + F C N
Sbjct: 493 GTITCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAF-MCRN- 550
Query: 294 QVQCALSKKCIPHNWLCD----------------------EEMDCSTDDIVDNTDEDWDK 331
K CIP ++CD EE C+ V NT D
Sbjct: 551 -------KVCIPKQFVCDHDDDCGDGSDESLQCGYRPCGAEEFSCADGRCVLNTQWQCDG 603
Query: 332 YF-----SHNAVL---CHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCN 377
F S A L C E C SS +C++ CD K DC +G DE
Sbjct: 604 DFDCPDHSDEAPLNPKCKTAEQSCNSSFFMCKNGRCISSGHLCDNKDDCGDGSDESNCHI 663
Query: 378 NKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTH 433
N+ + + CS C P G C C G ++ KT CVD DEC C Q C NT+
Sbjct: 664 NECLSKKVSGCSQDCQDLPVGYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTY 722
Query: 434 LSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+Y C CTEGY ++PD C +++ DE +I + ++R+I +GS
Sbjct: 723 GTYKCICTEGYEVQPDNPNGCKSLS---DEEPFLILADHHELRKISTDGS 769
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 146/361 (40%), Gaps = 71/361 (19%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 1268 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKNCE 1324
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G C+ S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 1325 PASPSCSSSEYICASGGCVSASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 1382
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ +C G C + C + W+CD E
Sbjct: 1383 PIRWLCDGIHDC-----VDGSDEE-----KCDRGGNICRADEFLCNNSLCKLYFWVCDGE 1432
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 1433 DDCGDNSDEAPDLCVKFLCPPTRPHRCRNNRTCLQSEQMCNGIDDCGDNSDEDHCSGKLT 1492
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCEN----LKCS 388
+ A C +E C + N CV + CD DC +G DE + + CE+
Sbjct: 1493 YKARPCKKDEFACSNKN-CVPMDLQCDQLDDCGDGSDEQGCRLSSTEFTCEDNVNPCGDD 1551
Query: 389 HKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C+ C C G +N QC D +ECL+ G+C C N SY C C + +
Sbjct: 1552 AYCNQIKTSVFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYKCVCDQNFQE 1611
Query: 447 R 447
R
Sbjct: 1612 R 1612
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 1053 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 1111
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 1112 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 1165
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 1166 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 1215
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 1216 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 1243
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 1093 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 1151
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 1152 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 1205
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 1206 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTLK 1254
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 1255 DFLCANGD-CVSSRFWCDGDFDCADGSDE 1282
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 1131 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 1190
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 1191 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 1243
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 1244 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 1291
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 1292 DQFQC-SNGQCISAKWKCDGHEDCKYGEDE 1320
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 102/231 (44%), Gaps = 33/231 (14%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDE 267
+F CG G+CI CDG C + ++ C ++ C G C+ +++C+PH+ LCD
Sbjct: 251 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCS-NRRCVPHSKLCDG 309
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 310 ENDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNN 363
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
+F V +RC S++ CV + CDG DC + DE LKC
Sbjct: 364 TDCTHFYKLGVK-TAGFIRCNSTSLCVLPTWICDGSNDCGDYSDE------------LKC 410
Query: 388 ----SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG----SCDQTCT 430
HKC G CP+G+ T D + DG CD +C+
Sbjct: 411 PVQNKHKCEENYFG----CPSGRCILNTWICDGQKDCEDGLDEFHCDSSCS 457
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS V
Sbjct: 1788 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFGERIYWADFELSVIGSVLRDGSDLVVSVSS 1847
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 1848 KQGLLHPHRI 1857
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 100/274 (36%), Gaps = 49/274 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 891 IGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSHRHKV--P 946
Query: 168 NELRCGSSNQCVALSKF------CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
N+ G +AL+ F DGK A T G + S
Sbjct: 947 NQDIPGV----IALTLFEDYIYWTDGKTK--------SLSRAHKTSGTDRLSL----INS 990
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVD 278
W + + +P+ H C C+ L H C + D+
Sbjct: 991 WHAITDIQ-VYHSYRQPDVSNHFCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT- 1048
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C Q +C + KCIP W CD + DD D +DE D
Sbjct: 1049 -------CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEF 1091
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P +CG+ C + CDG+ DC + DE
Sbjct: 1092 KCQPGRFQCGTG-LCALPAFICDGENDCGDNSDE 1124
>gi|260823876|ref|XP_002606894.1| hypothetical protein BRAFLDRAFT_126357 [Branchiostoma floridae]
gi|229292239|gb|EEN62904.1| hypothetical protein BRAFLDRAFT_126357 [Branchiostoma floridae]
Length = 1296
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 138/323 (42%), Gaps = 58/323 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C ++ RC S C+ + CD +PDC++G DE C EC P ++ C +G+CI E
Sbjct: 283 AAECRKDQFRCNGSGICLPAAWRCDSQPDCTDGSDEAG-CGQECLPEEWRCDIGRCIKEK 341
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W+CDG DC DGSDE + C Q +C +C+P W CD + DC D +D
Sbjct: 342 WRCDGDKDC-PDGSDEKDCETPTCSETQFRCP-DGRCLPSKWRCDGQDDCK--DGPPGSD 397
Query: 282 E---DWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
E D Q C + C +CI W+CD + DCS +I D D + +
Sbjct: 398 EAGCDASSAPQPCATFEFHCG-DGECIHETWVCDGDGDCS--NIADEMDCAAEPP-TQKE 453
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
C RC N C++ + CDG+ DC + DE DC
Sbjct: 454 KDCSAGYFRC-EPNGCISEERICDGQVDCEDASDE-------QDC--------------- 490
Query: 398 AMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
D DEC + G C Q C N Y CSC GY L+ GK +
Sbjct: 491 -----------------DLDECGVPGYCSQLCENGFGVYSCSCLGGYELQTGGKCVASGQ 533
Query: 458 VPQDEPASIIFSSTVDIRRIHLN 480
P +I S+ +I R+++
Sbjct: 534 EPY-----LIVSNRREIVRLNVR 551
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 123/304 (40%), Gaps = 89/304 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESW 222
C RC S+++C+ L CDG+ DC + DE P C G+F C G CIP+ +
Sbjct: 126 CEGGSFRC-SNSRCIPLKFMCDGEDDCKDNSDESSCPVCRL----GKFLCKSGSCIPDKY 180
Query: 223 KCDGFVDCLEDGSDE--------------------------------------------- 237
+CDG DC +D SDE
Sbjct: 181 RCDGVDDC-KDNSDEEGCEPENSTTPVQHRTTTKTSTISPSTTTTSRTTSTASTTTRSET 239
Query: 238 -PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
P T C + Q C KCIP++WLCD+ DC+ D +DED + +C Q +
Sbjct: 240 SPKT-TGTCSSDQTMCRDGSKCIPNSWLCDKAEDCA-----DGSDED-NCAAECRKDQFR 292
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C S C+P W CD + DC+ D +DE + C P E RC +C+
Sbjct: 293 CNGSGICLPAAWRCDSQPDCT-----DGSDE------AGCGQECLPEEWRC-DIGRCIKE 340
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVD 415
CDG DC +G DE DCE CS CP G+ P+K +C
Sbjct: 341 KWRCDGDKDCPDGSDE-------KDCETPTCSE--------TQFRCPDGRCLPSKWRCDG 385
Query: 416 ADEC 419
D+C
Sbjct: 386 QDDC 389
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 76/171 (44%), Gaps = 18/171 (10%)
Query: 205 CTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
C G F C CI E W+CDG DC DGSDE + C + QC CIP W
Sbjct: 39 CPEGDFKCHSHAVCIREGWRCDGENDCY-DGSDELDCPETFCAKSEFQCRDPPSCIPARW 97
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
CD E DC+ +T W + C G +C+ S +CIP ++CD E DC
Sbjct: 98 ACDGERDCADSSDEADTACVWFRRRSKPCEGGSFRCSNS-RCIPLKFMCDGEDDCK---- 152
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE + +C + C S C+ CDG DC + DE
Sbjct: 153 -DNSDE-------SSCPVCRLGKFLC-KSGSCIPDKYRCDGVDDCKDNSDE 194
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 79/172 (45%), Gaps = 23/172 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C + +C S C+ CDG+ DC +G DE C +F C CIP W
Sbjct: 39 CPEGDFKCHSHAVCIREGWRCDGENDCYDGSDELDCPETFCAKSEFQCRDPPSCIPARWA 98
Query: 224 CDGFVDCLEDGSDEPNT-CI------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG DC D SDE +T C+ C G +C+ S +CIP ++CD E DC
Sbjct: 99 CDGERDCA-DSSDEADTACVWFRRRSKPCEGGSFRCSNS-RCIPLKFMCDGEDDCK---- 152
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DN+DE C G+ C S CIP + CD DD DN+DE+
Sbjct: 153 -DNSDE--SSCPVCRLGKFLCK-SGSCIPDKYRCD-----GVDDCKDNSDEE 195
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 17/128 (13%)
Query: 58 LALEFNHRN--------QSLCFIQQQN-------VSSVRLRCAQINDLLNSWDLPAPEIF 102
LA+++ H+N +++C + QN V+ A D ++ W A +
Sbjct: 1064 LAVDWIHQNLYWTETMGEAICVMNLQNGRWRTLIKEDVKRPFAIALDPIDGWVYFADWAY 1123
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
P +E+ GM G R ++T+ I WPS L ID++ L+W D+ ++++ S +DG +
Sbjct: 1124 PA--SIERVGMDGWERRAIITEQIIWPSGLAIDFHSRKLFWSDAKIDSIWSSDMDGKNRR 1181
Query: 163 VLCHPNEL 170
++ L
Sbjct: 1182 IIVGSRRL 1189
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
D ++E+A M G+ R +V NI WP+ L IDY L+W D T+ES + G V+
Sbjct: 680 DPKIERAWMDGQQREVIVGDNITWPNGLAIDYVSRRLFWLDGKKGTLESSNLLGGDRMVI 739
Query: 165 C-HP 167
HP
Sbjct: 740 TQHP 743
>gi|335288150|ref|XP_003126347.2| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Sus scrofa]
Length = 1598
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 153/371 (41%), Gaps = 87/371 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 590 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 648
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 649 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 699
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 700 ----ACSTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 747
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 748 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQSPHCKDKKEFLCRNQR 807
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 808 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 867
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 868 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 927
Query: 460 QDEPASIIFSS 470
D +F S
Sbjct: 928 DDNEIRSLFPS 938
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 109/217 (50%), Gaps = 17/217 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMG 215
DG + C ++ C +++C+ CD + DC + DE P C +C PGQF C G
Sbjct: 380 DGRNCVSNCTASQFVC-KNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTG 438
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C ++ CDG DC +D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 439 ICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG--- 494
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 495 --DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANC 543
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 544 TQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 580
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 1079 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 1135
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDEPASIIFSST 471
C D DEC C Q C NTH SY C C EGY R D SC AV DE +IF++
Sbjct: 34 CADVDECSTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVT---DEEPFLIFANR 90
Query: 472 VDIRRIHLNGS 482
+R+++L+GS
Sbjct: 91 YYLRKLNLDGS 101
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 224 IGRIGMDGSGRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 280
>gi|195174473|ref|XP_002027998.1| GL16648 [Drosophila persimilis]
gi|194115712|gb|EDW37755.1| GL16648 [Drosophila persimilis]
Length = 816
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 161/365 (44%), Gaps = 80/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE + CT F+C G CI +++CDG DC D SDE
Sbjct: 48 CIPRTWLCDGENDCKDFSDETHCNRSSCTEEHFTCNDGYCISLAFRCDGERDC-NDNSDE 106
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 107 FKCAAVINICPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 161
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +C+ CIP W CD+E DC D +++ D +++ C +E
Sbjct: 162 KPSLCTSNEYKCS-DGTCIPKRWKCDKEQDC------DGGEDENDCGLVEHSLNCGSDEF 214
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C ++ +C+ + CDG DCS+ EDE G F C K + NLK
Sbjct: 215 SC-NNGRCILRTWLCDGYADCSSAEDEVDCHLQCDPGQFLCPTKQNVTNLKICVHQKHVC 273
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C T +G+ C C G + NK C D D
Sbjct: 274 DGHSDCPSGEDELNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDKNKVNCTDID 333
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S++CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 334 ECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDLRSCKALG----GAMTLLVANRWDIR 389
Query: 476 RIHLN 480
R+ L+
Sbjct: 390 RVTLS 394
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E+A M G R +++ + WP+ L IDY +YW D+ + +E +DG+
Sbjct: 516 KIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECSNLDGT 568
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 48 FKRILNGTH-TLALEFNHRNQSLCF---IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+ ++ G H +AL+F++R ++L F + + V + ++ D++ W L +P
Sbjct: 398 YTAVVKGLHNAIALDFHYR-RALMFWSDVSTDVIKMVYMNGTRVRDVI-KWGLESPGGIA 455
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN- 149
+D R+E + G R+ + + ++ P ++VI + + +W D N
Sbjct: 456 VDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVIHPGEALAFWSDWGPNP 515
Query: 150 TVESVRVDGSHNAVLCH-----PNELRCGSSNQCVALSKFCDGKPDCSN 193
+E +DGS V+ PN L N+ + + +CSN
Sbjct: 516 KIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECSN 564
>gi|387016734|gb|AFJ50486.1| Low-density lipoprotein receptor 1-like [Crotalus adamanteus]
Length = 862
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 105/331 (31%), Positives = 146/331 (44%), Gaps = 36/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C + N C+A CD DC + DE C P F C +CIP+ W C
Sbjct: 112 CADDQFQCQNGN-CIAFDFVCDEDDDCGDSSDELNCRAPTCNPEMFHCNSSECIPKFWVC 170
Query: 225 DGFVDCLEDGSDEPNTC--IHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
D DC +DGSDE I Q C + C S CI W CD DC
Sbjct: 171 DNEADC-KDGSDESAEFCGIQQGAKKTNPCSPLEFHCG-SGVCIHQRWQCDGSFDCK--- 225
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C + QC CI + C++E DC D +DE
Sbjct: 226 --DRSDEANCVKATCRPDEFQCN-DGMCIHGSLQCNQEPDCK-----DLSDE----VGCI 273
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---NNKADCENLKCSHKCS 392
N C + + SS +C+++ K C+G DC + DE P N+ CSH C+
Sbjct: 274 NVTTCKGSNVFKCSSGECISMDKVCNGLKDCRDWSDE-PLKECRTNECLANKGGCSHICN 332
Query: 393 PTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C CP G Q ++ +C D DECL +C Q C N SY C C EGY + P K
Sbjct: 333 DLKIGYECLCPEGFQLIDQRKCEDIDECLNPDACSQVCVNLKGSYKCECKEGYQIDPTTK 392
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C A+ A + F++ ++R++ L+ S
Sbjct: 393 ACKAIGT----IAYLFFTNRHEVRKMTLDRS 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 103/334 (30%), Positives = 147/334 (44%), Gaps = 67/334 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C + + C+ CDGKP+C +G DE + C+ QFSCG + +CI
Sbjct: 30 CGRNEFQCRNGD-CIPYKWICDGKPECQDGSDESLDACKSVTCSSTQFSCGGRINRCIDM 88
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CD VDC E+ SDE N +C + Q QC + CI +++CDE+ DC D++
Sbjct: 89 SWRCDSEVDC-ENDSDEDNCPPKRCADDQFQCQ-NGNCIAFDFVCDEDDDCG-----DSS 141
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD----KYFSHN 336
DE + C C S +CIP W+CD E DC D +DE + + +
Sbjct: 142 DELNCRAPTCNPEMFHCN-SSECIPKFWVCDNEADCK-----DGSDESAEFCGIQQGAKK 195
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------------GP 374
C P E CGS C+ CDG DC + DE G
Sbjct: 196 TNPCSPLEFHCGSG-VCIHQRWQCDGSFDCKDRSDEANCVKATCRPDEFQCNDGMCIHGS 254
Query: 375 F-CNNKADCENLKCSHKC--SPTPRGAMCF-CPAGQNPNKTQ-------CVD-------- 415
CN + DC++L C T +G+ F C +G+ + + C D
Sbjct: 255 LQCNQEPDCKDLSDEVGCINVTTCKGSNVFKCSSGECISMDKVCNGLKDCRDWSDEPLKE 314
Query: 416 --ADECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
+ECL + G C C + + Y C C EG+ L
Sbjct: 315 CRTNECLANKGGCSHICNDLKIGYECLCPEGFQL 348
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 96/195 (49%), Gaps = 25/195 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCI 259
+C +F C G CIP W CDG +C +DGSDE + C C + Q C +CI
Sbjct: 28 GKCGRNEFQCRNGDCIPYKWICDGKPEC-QDGSDESLDACKSVTCSSTQFSCGGRINRCI 86
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
+W CD E+DC D +DED +C + Q QC + CI +++CDE+ DC
Sbjct: 87 DMSWRCDSEVDCEND-----SDEDNCPPKRCADDQFQCQ-NGNCIAFDFVCDEDDDCG-- 138
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNN 378
D++DE + A C+P C SS +C+ CD + DC +G DE FC
Sbjct: 139 ---DSSDE-----LNCRAPTCNPEMFHCNSS-ECIPKFWVCDNEADCKDGSDESAEFCGI 189
Query: 379 KADCENLKCSHKCSP 393
+ + K ++ CSP
Sbjct: 190 Q---QGAKKTNPCSP 201
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++ K+G++G + PLV + IQWP+ + +D LYW DS ++V S+ V+G +
Sbjct: 540 MSAKIAKSGLNGVDSFPLVKEGIQWPNGIALDLITHRLYWVDSKYHSVFSIDVNGENRRT 599
Query: 164 LCHPNEL 170
+ E+
Sbjct: 600 ILMDEEM 606
>gi|198458169|ref|XP_002136192.1| GA27992 [Drosophila pseudoobscura pseudoobscura]
gi|198142446|gb|EDY71195.1| GA27992 [Drosophila pseudoobscura pseudoobscura]
Length = 864
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/365 (30%), Positives = 161/365 (44%), Gaps = 80/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE + CT F+C G CI +++CDG DC D SDE
Sbjct: 89 CIPRTWLCDGENDCKDFSDETHCNRSSCTEEHFTCNDGYCISLAFRCDGERDC-NDNSDE 147
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C G+ +C S +CI + + CD + DC D +DE+
Sbjct: 148 FKCAAVINICPEGEFKCRGGLGGAGGPSGQCILNRFRCDGDNDCG-----DWSDEENCPQ 202
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + + +C+ CIP W CD+E DC D +++ D +++ C +E
Sbjct: 203 KPSLCTSNEYKCS-DGTCIPKRWKCDKEQDC------DGGEDENDCGLVEHSLNCGSDEF 255
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF-CNNKADCENLK--------- 386
C ++ +C+ + CDG DCS+ EDE G F C K + NLK
Sbjct: 256 SC-NNGRCILRTWLCDGYADCSSAEDEVDCHLQCDPGQFLCPTKQNVTNLKICVHQKHVC 314
Query: 387 --------------------------CSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
C C T +G+ C C G + NK C D D
Sbjct: 315 DGHSDCPSGEDELNCPEEQSCFEPKQCEQLCIKTKKGSDECACRLGYLMDKNKVNCTDID 374
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S++CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 375 ECQYLTSPVCSQKCQNTLGSFICSCEMGYILRPDLRSCKALG----GAMTLLVANRWDIR 430
Query: 476 RIHLN 480
R+ L+
Sbjct: 431 RVTLS 435
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E+A M G R +++ + WP+ L IDY +YW D+ + +E +DG+
Sbjct: 557 KIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECSNLDGT 609
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 25/169 (14%)
Query: 48 FKRILNGTH-TLALEFNHRNQSLCF---IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+ ++ G H +AL+F++R ++L F + + V + ++ D++ W L +P
Sbjct: 439 YTAVVKGLHNAIALDFHYR-RALMFWSDVSTDVIKMVYMNGTRVRDVI-KWGLESPGGIA 496
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN- 149
+D R+E + G R+ + + ++ P ++VI + + +W D N
Sbjct: 497 VDWIHDLLFWTDSGTRRVEVSNFQGNLRTVIASNDLDKPRAIVIHPGEALAFWSDWGPNP 556
Query: 150 TVESVRVDGSHNAVLCH-----PNELRCGSSNQCVALSKFCDGKPDCSN 193
+E +DGS V+ PN L N+ + + +CSN
Sbjct: 557 KIERANMDGSQRQVIISNGVTWPNGLAIDYPNRKIYWADAKQHAIECSN 605
>gi|124286870|ref|NP_001074395.1| low-density lipoprotein receptor-related protein 8 precursor [Mus
musculus]
Length = 870
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 41 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 99
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC + D
Sbjct: 100 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC--EGGADEAG 156
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C + QC C+ C++E DC D +DE +
Sbjct: 157 CPTSAPGPCRENEFQCG-DGTCVLAIKRCNQERDCP-----DGSDE---AGCLQESTCEG 207
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAM 399
P +C S +CV K CD + DC + DE +C N CSH C+ G
Sbjct: 208 PRRFQC-KSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFE 266
Query: 400 CFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C CPAG Q ++ C D DEC +C Q C N + C C GY + K+C AV
Sbjct: 267 CTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV-- 324
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
+ S+IF++ ++RRI L
Sbjct: 325 -AGKSPSLIFTNRHEVRRIDL 344
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +L
Sbjct: 471 KIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKML 528
>gi|350540068|ref|NP_001233752.1| low-density lipoprotein receptor precursor [Cricetulus griseus]
gi|191132|gb|AAA51449.1| low density lipoprotein receptor [Cricetulus griseus]
Length = 854
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 153/375 (40%), Gaps = 75/375 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C E CG ++C+ S CDG+ DC NG DE C+ +F C GKCI +
Sbjct: 65 SVTCQSKEFSCGGRVSRCIPNSWRCDGQTDCENGSDEQGCAPKTCSQDEFRCQDGKCISQ 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------------------- 254
+ CD DC+ DGSDE + C +C
Sbjct: 125 KFVCDQDQDCV-DGSDEAHCQAATCGPAHFRCNSWPCIPSLWACDGDDDCEDGSDEWPQN 183
Query: 255 -----------------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
S +CI +W+CD DC D +DE+ C
Sbjct: 184 CGGRDTAAAWSSSPCSSLEFHCGSSECIHRSWVCDGSADCK-----DKSDEEHCVTATCR 238
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
+ QCA CI + CD E DC D +DE N C PN+ +C S
Sbjct: 239 PDEFQCA-DGTCIHGSRQCDREYDCK-----DMSDE----LGCINVTQCDGPNKFKC-HS 287
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QN 407
+C+AL K CD DC + DE +C N CSH C G C CP G Q
Sbjct: 288 GECIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL 347
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
++ +C D DEC +CDQ C N SY C C G+ + P + C AV A ++
Sbjct: 348 VDQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG----SVAYLL 403
Query: 468 FSSTVDIRRIHLNGS 482
F++ ++R++ L+ S
Sbjct: 404 FTNRHEVRKMTLDRS 418
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE RC +C+A CDG P+C +G DE + C +FSCG + +CIP
Sbjct: 27 CDRNEFRC-RDGKCIASKWVCDGSPECPDGSDESSETCMSVTCQSKEFSCGGRVSRCIPN 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE C + +C KCI ++CD++ DC VD +
Sbjct: 86 SWRCDGQTDC-ENGSDEQGCAPKTCSQDEFRCQ-DGKCISQKFVCDQDQDC-----VDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVL 339
DE + C +C S CIP W CD + DC + D + ++
Sbjct: 139 DEAHCQAATCGPAHFRCN-SWPCIPSLWACDGDDDCEDGSDEWPQNCGGRDTAAAWSSSP 197
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E CGSS +C+ S CDG DC + DE
Sbjct: 198 CSSLEFHCGSS-ECIHRSWVCDGSADCKDKSDE 229
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 29/169 (17%)
Query: 21 HNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLC 70
++ L D+ S D I+ D DW + Y+ + G+ ++A R ++L
Sbjct: 453 YSALMDQAPTLSYDTIISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTL- 511
Query: 71 FIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQW 128
Q++ + ++ + W PA +++K G++G + LVT++IQW
Sbjct: 512 -FQEKGSRPRDIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVTEDIQW 562
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
P+ + +D LYW DS L+++ S+ V+G + L HP L
Sbjct: 563 PNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSL 611
>gi|296212087|ref|XP_002752730.1| PREDICTED: prolow-density lipoprotein receptor-related protein 1
[Callithrix jacchus]
Length = 1976
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 142/540 (26%), Positives = 206/540 (38%), Gaps = 138/540 (25%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
IH C Q +C + +CIP + C+ + +C D DE
Sbjct: 840 IHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDE-------------RDCPEV 881
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA-----PEIFPLDERLEKAGMHGE 116
NQ C I ++ + V + C + ND ++ D PA P + P H +
Sbjct: 882 TCAPNQFQCSITKRCIPRVWV-CDRDNDCVDGSDEPANCSELPGLEPSSLPSVCCSHHPD 940
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL---CHPNELRCG 173
R P QWP L+ ++G ++ C P + RC
Sbjct: 941 KRPP------QWP------------------LSRPPGTLLEGGSSSPYERTCEPYQFRC- 975
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+N+CV CD DC + DE C+ +FSC G+CI WKCDG DC D
Sbjct: 976 KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKCDGDHDC-AD 1034
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
GSDE + C +C Q QC S CIP W CD + DC +D +DE+ C G
Sbjct: 1035 GSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE-----ACSTG 1082
Query: 294 QVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LR 346
C L + C P W CD E DC DN+DE+ ++ +C PN R
Sbjct: 1083 VRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAQ---FVCPPNRPFR 1134
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLKC-------- 387
C + C+ + + CDG +C +G DE C +K + C N +C
Sbjct: 1135 CKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQTTHCKDKKEFLCRNRRCLSSSLRCN 1194
Query: 388 --------------------------------SHKCSPTPRGAMCFCPAGQN--PNKTQC 413
+C T + A C C +G + P + C
Sbjct: 1195 MFDDCGDGSDEEDCSIDPKLTSCTANASICGDEARCVRTEKAAYCACRSGFHTVPGQPGC 1254
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVPQDEPASIIF 468
D +ECL G+C Q C NT ++CSC + T + +G + + D +F
Sbjct: 1255 QDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIADDNEIRSLF 1314
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 154/377 (40%), Gaps = 81/377 (21%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 114 NNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 172
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTD--E 282
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 173 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 230
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------------------------- 316
+C C S +CIP +W CD+E DC
Sbjct: 231 LXXXXPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGEDETHCNKFCSEAQFECQNHRCI 289
Query: 317 -------STDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+DD D +DE +H C P+ C ++ CV CDG DC++
Sbjct: 290 SKQWLCDGSDDCGDGSDE-----AAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCAD 344
Query: 369 GEDE----GPFCNNKADCENLKCSHKCSPTPRGAMC----------------FCPAG--Q 406
G DE G N+ D C ++ P+ +C FC G
Sbjct: 345 GADESIAAGCLYNSTCDDREFMCQNR-QCIPKHFVCDHDRDCADGSDESPDAFCRPGFRL 403
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR-PDGKSCTAVNVPQDEPAS 465
+ C D DEC C Q C NTH SY C C EGY R D SC AV DE
Sbjct: 404 KDDGRTCADVDECGTTFPCSQRCINTHGSYKCLCVEGYAPRGGDPHSCKAVT---DEEPF 460
Query: 466 IIFSSTVDIRRIHLNGS 482
+IF++ +R+++L+GS
Sbjct: 461 LIFANRYYLRKLNLDGS 477
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 131/315 (41%), Gaps = 49/315 (15%)
Query: 93 SWDLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ D I+ D R +E A + G NR +++++I P + +D +YW D
Sbjct: 625 TLDYVTERIYWADAREDYIEFASLDGSNRHVVLSQDI--PHIFALTLFEDYVYWTDWETK 682
Query: 150 TVESV-RVDGSHNAVLC----------------------HPNELRCGSSNQCVALSKFCD 186
++ + G++ +L HP ++ G + LS
Sbjct: 683 SINRAHKTTGTNKTLLISTLHRPMDLHVFHALRQPDVPNHPCKVNNGGCSNLCLLSPGGG 742
Query: 187 GKPDCSNG---EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
K C +G C + CT QF C KCIP WKCD DC D SDEP C
Sbjct: 743 YKCACPTNFYLGSDGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDC-GDHSDEPPDCPE 801
Query: 244 -QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
+C GQ QC+ + C ++CD + DC DN+DE H C Q +C + +
Sbjct: 802 FKCRPGQFQCS-TGICTNPAFICDGDNDCQ-----DNSDEANCDIHVCLPSQFKCTNTNR 855
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP + C+ + +C + + E V C PN+ +C + +C+ CD
Sbjct: 856 CIPGIFRCNGQDNCGDGEDERDCPE----------VTCAPNQFQCSITKRCIPRVWVCDR 905
Query: 363 KPDCSNGEDEGPFCN 377
DC +G DE C+
Sbjct: 906 DNDCVDGSDEPANCS 920
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 136/324 (41%), Gaps = 65/324 (20%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ +S CD + DC +GEDE CN C+ QF C +CI + W CDG DC DG
Sbjct: 247 SGRCIPMSWTCDKEDDCEHGEDE-THCNKFCSEAQFECQNHRCISKQWLCDGSDDC-GDG 304
Query: 235 SDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQ 289
SDE C + C C + C+P WLCD + DC+ D DE
Sbjct: 305 SDEAAHCEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCA-----DGADESIAAGCLYNST 359
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + C +++CIP +++CD + DC+ D +DE D + C P
Sbjct: 360 CDDREFMCQ-NRQCIPKHFVCDHDRDCA-----DGSDESPDAF-------CRPGFRL--- 403
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC-ENLKCSHKCSPTPRGAMCFC-----P 403
+D+G C + +C CS +C T C C P
Sbjct: 404 --------------------KDDGRTCADVDECGTTFPCSQRCINTHGSYKCLCVEGYAP 443
Query: 404 AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G +P+ + V +E + + +L + YTL G + AV + D
Sbjct: 444 RGGDPHSCKAVTDEEPFLIFA-----NRYYLRKLNLDGSNYTLLKQGLN-NAVALDFDYR 497
Query: 464 ASIIFSSTVD-----IRRIHLNGS 482
+I+ + V IRR+HLNGS
Sbjct: 498 EQMIYWTDVTTQGSMIRRMHLNGS 521
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 1457 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 1513
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 600 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 656
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N+ C F C G+CI S CDG C + ++P+ C +C QC + +C+
Sbjct: 62 NSSCXXXXFECANGECINFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVS 120
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TD 319
+ C+ DD D +DE C G+ +C CI ++ C++ +DC
Sbjct: 121 NMLWCN-----GADDCGDGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDAS 174
Query: 320 DIVDNTDEDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D ++ + D YF VL P C ++ C A S CDG DC + DE
Sbjct: 175 DEMNCSATDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 225
>gi|14018364|emb|CAC38356.1| ApoE receptor-2 [Mus musculus]
Length = 870
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/321 (33%), Positives = 144/321 (44%), Gaps = 23/321 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 41 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 99
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC + D
Sbjct: 100 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC--EGGADEAG 156
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C + QC C+ C++E DC D +DE +
Sbjct: 157 CPTSAPGPCRENEFQCG-DGTCVLAIKRCNQERDCP-----DGSDE---AGCLQESTCEG 207
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAM 399
P +C S +CV K CD + DC + DE +C N CSH C+ G
Sbjct: 208 PRRFQC-KSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFE 266
Query: 400 CFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C CPAG Q ++ C D DEC +C Q C N + C C GY + K+C AV
Sbjct: 267 CTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV-- 324
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
+ S+IF++ ++RRI L
Sbjct: 325 -AGKSPSLIFTNRHEVRRIDL 344
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EKAG++G +R PLV+ NI+WP+ + +D LYW DS L+ + S+ +G + +L
Sbjct: 471 KIEKAGLNGADRQPLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKML 528
>gi|301627452|ref|XP_002942891.1| PREDICTED: low-density lipoprotein receptor 1-like [Xenopus
(Silurana) tropicalis]
Length = 894
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 149/373 (39%), Gaps = 72/373 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
V C + CG N+C+ L CDG+ DC NG DE C QF+C GKCI
Sbjct: 66 KVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCIS 125
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD +DC +DGSDE C QC CIP W CD + DC D
Sbjct: 126 LDFVCDEDLDC-DDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE-----DG 179
Query: 280 TDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE + + C+ S +CI +W CD DC D +DE
Sbjct: 180 SDEQHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGYDCK-----DKSDEK----- 229
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP--------- 374
C P+E +C + C+ S+ CD + DC + D EGP
Sbjct: 230 DCVKPTCRPDEFQC-NDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGE 288
Query: 375 ------FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAGQN-PN 409
CN K DC N C+H C+ G C C G +
Sbjct: 289 CITMDKVCNKKRDCRDWSDEPIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRLVD 348
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
K +C D +EC +C Q C N Y C C EGY + P SC ++ A + F+
Sbjct: 349 KKRCEDINECENPNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGT----VAYLFFT 404
Query: 470 STVDIRRIHLNGS 482
+ ++R++ L+ S
Sbjct: 405 NRHEVRKMTLDRS 417
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 145/361 (40%), Gaps = 73/361 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN-AE 204
H++ + VR C +E +CG +C+ CDG +C +G DE P C
Sbjct: 19 HVSAISEVRK--------CDRSEFQCGD-GKCIPYKWICDGSAECKDGSDESPETCKVVT 69
Query: 205 CTPGQFSCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
C FSCG + +CIP WKCDG DC E+GSDE + C + Q C S KCI +
Sbjct: 70 CGADHFSCGGRLNRCIPLLWKCDGQTDC-ENGSDENDCTRKVCADDQFTCR-SGKCISLD 127
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
++CDE++DC D +DE + C QC CIP W CD + DC
Sbjct: 128 FVCDEDLDCD-----DGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE----- 177
Query: 323 DNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------- 372
D +DE + C P E CG S +C+ +S CDG DC + DE
Sbjct: 178 DGSDEQHCEGREPIKTDKPCSPLEFHCG-SGECIHMSWKCDGGYDCKDKSDEKDCVKPTC 236
Query: 373 ---------------GPFCNNKADCENLKCSHKCSPTP----------RGAMCFCPAGQN 407
C+ + DC++L C R C
Sbjct: 237 RPDEFQCNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKVC 296
Query: 408 PNKTQCVD----------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
K C D +EC+ +G C C + + Y C C EGY L D K C +
Sbjct: 297 NKKRDCRDWSDEPIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRLV-DKKRCEDI 355
Query: 457 N 457
N
Sbjct: 356 N 356
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT+NI+WP+ + +D LYW DS L+++
Sbjct: 536 WGLPA--------KIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSC 587
Query: 154 VRVDGSHNAVL 164
+ V G + +
Sbjct: 588 IDVTGQNRITV 598
>gi|312371454|gb|EFR19638.1| hypothetical protein AND_22080 [Anopheles darlingi]
Length = 536
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 132/288 (45%), Gaps = 36/288 (12%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHN 262
QF+C CI W+CDG DC DG+DE T + C + +C CI +
Sbjct: 105 QFACAENYCITSKWRCDGETDC-PDGADERGCSSPAPTLTNPCLPLEYRCNDLVTCIHRS 163
Query: 263 WLCDEEMDCSTDD-----IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
W+CD E DC D + N C + Q QC K+CI ++ C+ + DC
Sbjct: 164 WICDGEKDCPRGDDEMAPVCSNV--------TCRSDQFQCVKDKQCINGHFACNGKNDCP 215
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D +DE + + N C+P E CG C+ L+K CD KPDC +DE
Sbjct: 216 -----DGSDE-LNCGGNGNGEKCNPKTEFDCGGG-MCIPLAKVCDKKPDCPMFQDEPADK 268
Query: 377 NNKADC--ENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
K +C N CS C TP C C P + + CVD DEC G+C Q CTN+
Sbjct: 269 CGKNECLENNGGCSQNCIDTPASYYCDCKPGYKLSDNRTCVDIDECEEPGTCSQNCTNSI 328
Query: 434 LSYVCSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
S+ C C GY P D C A + AS++F+ DIR+I L+
Sbjct: 329 GSFKCECMPGYLRDPRDHTRCKAT----EGHASLLFARRHDIRKISLD 372
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAE-CTPG-QFSCGMGKC 217
V C ++ +C QC+ C+GK DC +G DE G N E C P +F CG G C
Sbjct: 186 VTCRSDQFQCVKDKQCINGHFACNGKNDCPDGSDELNCGGNGNGEKCNPKTEFDCGGGMC 245
Query: 218 IPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCI--PHNWLCD 266
IP + CD DC + + C ++C C S+ CI P ++ CD
Sbjct: 246 IPLAKVCDKKPDCPMFQDEPADKCGKNECLENNGGC--SQNCIDTPASYYCD 295
>gi|449686834|ref|XP_004211272.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like,
partial [Hydra magnipapillata]
Length = 1465
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/289 (31%), Positives = 142/289 (49%), Gaps = 32/289 (11%)
Query: 95 DLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D+ I+ D +R+E A M+G +R ++ +N+ P + + LYW D H +V
Sbjct: 187 DISESRIYWADARTDRIESADMNGRDRRTVI-QNV--PHVFGVTLHGLYLYWTDWHTKSV 243
Query: 152 ESV-RVDGSHNAVL-----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC 205
+ ++ G + + P +++ S+ +C+ L CDG+ DC +G DE C EC
Sbjct: 244 KRADKLTGKNVRIFKDKLDAQPMDIK--STGKCIQLRFKCDGEADCEDGSDEFG-CKPEC 300
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLC 265
G F C GKCI + C+G DC D SDE + +C +C S C+ W+C
Sbjct: 301 KEGYFKCVNGKCIQPRFNCNGENDC-GDNSDEESCPPSKCLPNFFKCETSTGCVRDGWVC 359
Query: 266 DEEMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
D DC+ +D+ + N +D +C QC +KCIP +W CD++ DC D
Sbjct: 360 DGMNDCADGSDEKLSNCKKD-----KCSTEDFQCDDQRKCIPLSWKCDKDFDC-----YD 409
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE K + + C N+ CG + C++ CDG+ DCS+G DE
Sbjct: 410 GSDE---KICDLHNITCSDNKHLCGDGS-CISALFNCDGESDCSDGSDE 454
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 143/331 (43%), Gaps = 53/331 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESW 222
C + +C +C+ LS CD DC +G DE N C+ + CG G CI +
Sbjct: 381 CSTEDFQCDDQRKCIPLSWKCDKDFDCYDGSDEKICDLHNITCSDNKHLCGDGSCISALF 440
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DGSDE N C C + +C + +CIP ++ CD + DC D D +D
Sbjct: 441 NCDGESDC-SDGSDEKN-CNRTCLPNEFRCLTTSRCIPIHYQCDGDNDCG--DNSDESDR 496
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS------------------------- 317
+ H C G+ QC+ CI +W CD E DC+
Sbjct: 497 NGCNKHTCKKGEFQCS-DGMCIREDWRCDHETDCADASDELGCNCNIQTSFKCLSGECLS 555
Query: 318 -------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNG 369
T + D +DE S + C+ + C S S++C+ S+ C+ + DCS+G
Sbjct: 556 KIVKCDGTKNCKDGSDE------SESICPCNGGKFMCRSNSSECILESQVCNKQKDCSDG 609
Query: 370 EDEGP-FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCD 426
DE F N A C+H C P+G C C G +K CV + + C
Sbjct: 610 SDEKSCFINECAHASLNLCAHICKDLPQGYECLCKNGYKLESDKMSCVSNCDDYANHGCS 669
Query: 427 QTCTNTHLS----YVCSCTEGYTLRPDGKSC 453
Q C + S + CSC GY+L + +SC
Sbjct: 670 QLCQTLNNSINGEHHCSCAPGYSLDINLRSC 700
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/304 (33%), Positives = 135/304 (44%), Gaps = 46/304 (15%)
Query: 175 SNQCVALSKF-CDGKPDCS-NGEDEGPFCNAE-CTPG-QFSCGMGKCI---------PES 221
+NQ L+++ CDG DC N ++E P CN+E C P F C KCI +
Sbjct: 1185 NNQRCILNRYKCDGDNDCKDNSDEESPECNSEKCNPSNHFLCENKKCISKCNNQNCVAKD 1244
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+ CD DC D SDE N C + C Q +C KCI +W CD DC +D +D
Sbjct: 1245 FVCDHDNDC-GDSSDEKN-CSNMCSKNQFKCG-DGKCIESSWRCDNVADC-----LDKSD 1296
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E K + CA S C+ C+ DC D +DE S C
Sbjct: 1297 EISSKTFCNPEVKFPCATSGICLRKYKFCNGIQDCE-----DGSDEK-----SCPTKDCK 1346
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD---CENLKCSHKCSPTPRGA 398
+L+CG CV K CD DC+N EDE ++ A+ C++ +H+C
Sbjct: 1347 ITDLKCGDG-FCVDEKKRCDYYRDCANNEDENDCAHSHANSVICDHQCGAHRCVQNGSWI 1405
Query: 399 MCFCPAGQ--NPNKTQCVDADEC----LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
C C G + NKT CVD +EC LI C Q C N S++C C GY G+
Sbjct: 1406 QCQCGPGYKYDENKT-CVDINECEQTPLI---CSQICNNIKGSFLCKCANGYEHNDIGE- 1460
Query: 453 CTAV 456
C A+
Sbjct: 1461 CKAI 1464
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 115/255 (45%), Gaps = 39/255 (15%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ DG C + +C ++N+C++ + CD + DC + DE C F C
Sbjct: 1005 ISSDGKTCLSNCTTGQFKC-NNNRCISNAWRCDSENDCGDNSDEMKCDAVNCGSNMFFCN 1063
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
G C + + CDG DC D SDE N QC++ Q +CA + CI + CD + DC
Sbjct: 1064 NGNCTRQFYICDGDNDC-GDNSDELNCKDRQCYSYQFRCA-NDLCILQSKRCDGKNDCG- 1120
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCAL-------SKKCIPHNWLCDEEMDCSTDDIVDNTD 326
D +DE+ +C N C+L + +CI W CD + DC+ D +D
Sbjct: 1121 ----DQSDEE-----KCTNVTSLCSLETSFQCKNGQCIAKQWKCDGDYDCT-----DRSD 1166
Query: 327 EDWDK-YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCN------- 377
E ++ F C +C ++ +C+ CDG DC N ++E P CN
Sbjct: 1167 EQLEECSFKQ----CPKGFFKC-NNQRCILNRYKCDGDNDCKDNSDEESPECNSEKCNPS 1221
Query: 378 NKADCENLKCSHKCS 392
N CEN KC KC+
Sbjct: 1222 NHFLCENKKCISKCN 1236
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 27/224 (12%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+AV C N C + N C CDG DC + DE + +C QF C CI +
Sbjct: 1051 DAVNCGSNMFFCNNGN-CTRQFYICDGDNDCGDNSDELNCKDRQCYSYQFRCANDLCILQ 1109
Query: 221 SWKCDGFVDCLEDGSDEPNTCI---------HQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
S +CDG DC + +E T + QC NGQ CI W CD + DC
Sbjct: 1110 SKRCDGKNDCGDQSDEEKCTNVTSLCSLETSFQCKNGQ--------CIAKQWKCDGDYDC 1161
Query: 272 STDDIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
+ D +DE ++ F QC G +C +++CI + + CD + DC + ++ + +
Sbjct: 1162 T-----DRSDEQLEECSFKQCPKGFFKCN-NQRCILNRYKCDGDNDCKDNSDEESPECNS 1215
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDE 372
+K N LC + +NQ CVA CD DC + DE
Sbjct: 1216 EKCNPSNHFLCENKKCISKCNNQNCVAKDFVCDHDNDCGDSSDE 1259
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 155 RVDGSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+ D + C+P + C +S C+ KFC+G DC +G DE +C CG
Sbjct: 1294 KSDEISSKTFCNPEVKFPCATSGICLRKYKFCNGIQDCEDGSDEKSCPTKDCKITDLKCG 1353
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV---QCALSKKCIPHNWL 264
G C+ E +CD + DC + ++ N C H N + QC + +W+
Sbjct: 1354 DGFCVDEKKRCDYYRDCANN--EDENDCAHSHANSVICDHQCGAHRCVQNGSWI 1405
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
+ + G+ G + L +K+I++P L ID+ LYW DS L +E V +
Sbjct: 854 ISRVGLDGSKKEVLFSKDIKYPQGLTIDHVTQTLYWSDSVLKRIEYVHL 902
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 110/280 (39%), Gaps = 55/280 (19%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-YFKRILNGTHTLALEF 62
QC NGQ CI W CD + DC+ D +DE ++ FK+ G F
Sbjct: 1142 QCKNGQ--------CIAKQWKCDGDYDCT-----DRSDEQLEECSFKQCPKG-------F 1181
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAG-MHGENRSPL 121
N C + R +C ND ++ D +PE E+ + EN+ +
Sbjct: 1182 FKCNNQRCILN-------RYKCDGDNDCKDNSDEESPECNS--EKCNPSNHFLCENKKCI 1232
Query: 122 VTKNIQ--WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
N Q V D++ D D + + +C N+ +CG +C+
Sbjct: 1233 SKCNNQNCVAKDFVCDHDNDC------------GDSSDEKNCSNMCSKNQFKCGDG-KCI 1279
Query: 180 ALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGS 235
S CD DC + DE FCN E +F C G C+ + C+G DC EDGS
Sbjct: 1280 ESSWRCDNVADCLDKSDEISSKTFCNPEV---KFPCATSGICLRKYKFCNGIQDC-EDGS 1335
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
DE + C ++C C+ CD DC+ ++
Sbjct: 1336 DEKSCPTKDCKITDLKCG-DGFCVDEKKRCDYYRDCANNE 1374
>gi|26328189|dbj|BAC27835.1| unnamed protein product [Mus musculus]
Length = 519
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 153/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E + C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----ELQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CDG D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCDGDDD-CGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DD DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGE-----DDCADNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALGP---EPV-LLFANRIDIRQV 453
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDC 316
+ CI +W CD + DC
Sbjct: 156 S-DGSCIAEHWYCDGDTDC 173
>gi|328683463|ref|NP_112612.2| low-density lipoprotein receptor-related protein 4 precursor
[Rattus norvegicus]
gi|328671584|dbj|BAD18061.2| LDL receptor-related protein 4 [Rattus norvegicus]
Length = 1905
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/331 (32%), Positives = 153/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
I + + CD D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 203 RILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCVNAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
>gi|392348187|ref|XP_342878.5| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Rattus norvegicus]
Length = 873
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 107/321 (33%), Positives = 143/321 (44%), Gaps = 23/321 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE CT F+C G CIPE WKC
Sbjct: 44 CEEDQFRC-RNERCIPSVWRCDEDNDCSDNSDEDDCPKRTCTDSDFTCDNGHCIPERWKC 102
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC + D
Sbjct: 103 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC--EGGADEAG 159
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
C QC CI C++E DC +D +DE +
Sbjct: 160 CPTSAPGPCRENDFQCG-DGTCILAIKRCNQERDC-----LDGSDE---AGCLQESTCEG 210
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAM 399
P +C S +CV K CD + DC + DE +C N CSH C+ G
Sbjct: 211 PRRFQC-KSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFE 269
Query: 400 CFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C CPAG Q ++ C D DEC +C Q C N + C C GY + K+C AV
Sbjct: 270 CTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV-- 327
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
S+IF++ ++RRI L
Sbjct: 328 -AGRSPSLIFTNRHEVRRIDL 347
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + VS R RC N DL P +D
Sbjct: 406 LHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNR-----DLSEPRAIAVDPL 460
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 461 RGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSS 520
Query: 154 VRVDGSHNAVL 164
+ +G + +L
Sbjct: 521 IDFNGGNRKML 531
>gi|149022633|gb|EDL79527.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Rattus norvegicus]
Length = 519
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CDG D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 203 CILDIYHCDGDDD-CGDWSDESDCSSHQPCRSGEFMCD-SGLCVNAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DD DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRC-RSGRCVRLSWRCDGE-----DDCADNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALGP---EPV-LLFANRIDIRQV 453
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 67/139 (48%), Gaps = 9/139 (6%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDC 316
+ CI +W CD + DC
Sbjct: 156 S-DGSCIAEHWYCDGDTDC 173
>gi|340728803|ref|XP_003402703.1| PREDICTED: vitellogenin receptor-like isoform 1 [Bombus terrestris]
Length = 1759
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 162/387 (41%), Gaps = 71/387 (18%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
C+SH + V+ +G + C NE +C C++ C+G+ DC++ DE
Sbjct: 966 CNSHYDCVDRSDEEGC-DKKECDSNEFQC-HEGACISKYLVCNGQSDCTDFSDELNCDKH 1023
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--------IHQCFNG------- 248
+C F+C +G CIP++WKCDG DC DGSDE TC + C NG
Sbjct: 1024 KCDGDAFACEIGTCIPKTWKCDGEADC-PDGSDESVTCQRNACPTEMFTCSNGRCIDLVL 1082
Query: 249 -------------------------------QVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
Q +C ++ C+P C+ DC +D
Sbjct: 1083 KCNGVSECEDDSDEQYCKETGNRNYVNCTVDQYKCLNTELCLPKQVRCNGVTDCPKNDDE 1142
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY--FSH 335
N + + C N +KC+ +W+CD DC + D K S
Sbjct: 1143 RNCPRCQKEEYVCDN--------QKCVDKSWVCDRIDDCGDGSDEKDCDGGNSKISGISM 1194
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
N++ E +C S+ C+ + CDGK DCS+ DE C N C++ C TP
Sbjct: 1195 NSIC---KEFKC-SNGACLPFANVCDGKVDCSDRSDEFGQCATACTKYN-PCTNMCHKTP 1249
Query: 396 RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G +C C G + C D DEC D C Q C NT+ S+ CSC E Y +R D SC
Sbjct: 1250 IGPVCGCRNGYQLSNDFKSCEDIDECK-DNVCSQICYNTNGSFTCSCHEEYVIRSDKISC 1308
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ II S+ DIR++ N
Sbjct: 1309 KVAGSQME----IITVSSADIRKLSPN 1331
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 135/291 (46%), Gaps = 37/291 (12%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--------NTCIHQCFNGQVQCALSKKC 258
P F C KCI ++CDG +C DGSDE N +C + QC+ C
Sbjct: 35 PDLFLCSNKKCISSIFRCDGEDEC-GDGSDETGCEGYQLQNLETIRCAIDEYQCSDIHTC 93
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEM 314
IP CD + DCS D +DE + C V C K CI + W+CD
Sbjct: 94 IPIEKFCDAKEDCS-----DGSDE----YDGCVK-DVNCDAFKCKDGHCIRNEWVCDGIP 143
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEG 373
DC D +DE+ + + A C+ R N+ C++L+ C+ K +C + DE
Sbjct: 144 DCP-----DKSDEEKCENYMIPADQCNNEYDRYLCKNKRCISLNATCNEKDNCGDNSDED 198
Query: 374 PFCNNKAD--CENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGSCDQTC 429
KAD C+ +C H C TP GA C C G N+T C D +EC G CDQ C
Sbjct: 199 IDACIKADASCKEARCQHNCRKTPEGAQCSCRPGYKLVNNQTSCEDVNECGNYGICDQEC 258
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
N+ SY CSC GY+L D ++C A + ++FS +IR I+LN
Sbjct: 259 INSVGSYTCSCQPGYSLNDDKRTCQA----EGGEGLMMFSIKSEIRGIYLN 305
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECT-PGQFSCGMGKCIP 219
C+ E++CG + C+ + CDG DC NGEDE C+ + C QF C G CI
Sbjct: 902 CNAGEIKCGEHDICIKSHQRCDGIQDCPNGEDESSICDEHHWSRCKHEDQFQCKNGDCIS 961
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
++ +C+ DC+ D SDE +C + + QC CI +C+ + DC+ D
Sbjct: 962 KTKRCNSHYDCV-DRSDEEGCDKKECDSNEFQCH-EGACISKYLVCNGQSDCT-----DF 1014
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H+C C + CIP W CD E DC D +DE +V
Sbjct: 1015 SDELNCDKHKCDGDAFACEIG-TCIPKTWKCDGEADCP-----DGSDE---------SVT 1059
Query: 340 CH----PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS---HKCS 392
C P E+ S+ +C+ L C+G +C + DE +C + + C+ +KC
Sbjct: 1060 CQRNACPTEMFTCSNGRCIDLVLKCNGVSECEDDSDE-QYCKETGNRNYVNCTVDQYKCL 1118
Query: 393 PT 394
T
Sbjct: 1119 NT 1120
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 14/131 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ C +E +C + C+ + KFCD K DCS+G DE C + F C G CI
Sbjct: 77 TIRCAIDEYQCSDIHTCIPIEKFCDAKEDCSDGSDEYDGCVKDVNCDAFKCKDGHCIRNE 136
Query: 222 WKCDGFVDCLEDGSDE---PNTCI--HQCFN--GQVQCALSKKCIPHNWLCDEEMDCSTD 274
W CDG DC D SDE N I QC N + C +K+CI N C+E+ +C
Sbjct: 137 WVCDGIPDC-PDKSDEEKCENYMIPADQCNNEYDRYLCK-NKRCISLNATCNEKDNCG-- 192
Query: 275 DIVDNTDEDWD 285
DN+DED D
Sbjct: 193 ---DNSDEDID 200
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
LL S L + +D + +AGM G+N + LV+K+++ P+SL IDY + LYW D+
Sbjct: 410 LLPSSGLMYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAK 469
Query: 150 TVESVRVDGS-HNAVL 164
+ESVR+DG+ A+L
Sbjct: 470 VIESVRLDGTDRKAIL 485
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
S+D P EI+ ++ G N + +V +++ +L IDY + LYW D+ +E
Sbjct: 1453 SYDRPMTEIY-------RSNTMGTNITAIVHRDLGIVLALTIDYTRSRLYWSDTFHKNIE 1505
Query: 153 SVRVDGSHNAVL 164
S +DGS+ ++
Sbjct: 1506 SSNLDGSNRIIV 1517
>gi|17298317|gb|AAL38109.1| candidate tumor suppressor protein [Homo sapiens]
Length = 1537
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 157/370 (42%), Gaps = 60/370 (16%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 1 QNKHKCEENYFSC-PSGRCILNTWICDGQKDCEDGRDEF-HCDSSCSWNQFACSAQKCIS 58
Query: 220 ESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S+ C+P +WLCD E DC
Sbjct: 59 KHWICDGEDDC-GDGLDESDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 117
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F QC + CA
Sbjct: 118 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCA 177
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ + W CD + DC D++DE + C+ + C + +C+
Sbjct: 178 DGRCLLNTQWQCDGDFDCP-----DHSDEAPLNPKCKSAXQSCNSSFFMC-KNGRCIPSG 231
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPNKTQC 413
CD K DC +G DE N+ + + CS C P C C G ++ KT C
Sbjct: 232 GLCDNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKDDGKT-C 290
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTV 472
VD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I +
Sbjct: 291 VDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS---DEEPFLILADHH 347
Query: 473 DIRRIHLNGS 482
+IR+I +GS
Sbjct: 348 EIRKISTDGS 357
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 856 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 912
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 913 PASPTCSSREYICASDGCISASLKCNGEYDCA-DGSDEMD-CVTECKEDQFRCKNKAHCI 970
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 971 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 1020
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 1021 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 1080
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 1081 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 1139
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 1140 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 1190
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 1191 CVCDQNFQER 1200
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 641 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 699
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 700 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 753
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 754 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 803
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 804 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 831
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 719 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 778
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 779 VCDEDPDCA-DASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 831
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 832 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 879
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 880 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 908
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 681 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 739
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 740 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 793
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 794 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 842
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 843 DFLCANGD-CVSSRFWCDGDFDCADGSDE 870
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DG
Sbjct: 1376 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDG 1426
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 103/268 (38%), Gaps = 37/268 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 479 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 534
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ G +AL+ F D ++G+ + A T G + SW
Sbjct: 535 NQDIPGV----IALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----IYSWHAITD 584
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+ + +P+ H C C+ L H C + D+
Sbjct: 585 IQ-VYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT------- 636
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q +C + KCIP W CD + DD D +DE D C P
Sbjct: 637 -CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEFRCQPGR 685
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+CG+ C + CDG+ DC + DE
Sbjct: 686 FQCGTG-LCALPAFICDGENDCGDNSDE 712
>gi|185135214|ref|NP_001117847.1| vitellogenin receptor precursor [Oncorhynchus mykiss]
gi|16610195|emb|CAD10640.1| vitellogenin receptor [Oncorhynchus mykiss]
Length = 847
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 151/328 (46%), Gaps = 34/328 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C E C +S +C++L+ C+G+ DC +G DE + C P +F CG CIP +W
Sbjct: 147 ITCASLEFTC-ASGRCISLNFVCNGEDDCGDGSDEQECAPSSCGPSEFQCGNATCIPGNW 205
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD VDC + + P C Q C + + QC S +CI W CD + DC
Sbjct: 206 VCDDDVDCQDQSDESPQRCGRQPTPPAKCSSSETQCG-SGECIHRKWQCDGDPDCK---- 260
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE C Q +C CI + C+ DC+ D TDE N
Sbjct: 261 -DGSDEANCSVRTCRPDQFKCE-DGNCIHGSRQCNGLRDCA-----DGTDE----VNCKN 309
Query: 337 AVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C+ P++ +C S +C+ +SK C+ DC + DE P CN N+ N CSH C
Sbjct: 310 LTQCNGPDKFKC-RSGECIEMSKVCNKARDCPDWSDE-PINECNLNECLLNNGGCSHICR 367
Query: 393 PTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
G C C P Q ++ C D +EC+ G C Q C N Y C C Y + P
Sbjct: 368 DMVIGFECDCTPGLQLIDRKTCGDINECMNPGICSQICINLKGGYKCECHNSYQMDPTTG 427
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV EP +IF++ DIR++ L
Sbjct: 428 VCKAVG---KEPC-LIFTNRRDIRKLGL 451
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 37/181 (20%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCAL 254
EC P QF CG G+CIP W+CDG DC DGSDE NTC+ + C NGQ
Sbjct: 26 TECEPSQFQCGNGRCIPSVWQCDGDEDC-SDGSDE-NTCVRKTCAEVDFVCRNGQ----- 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH--QCFNGQVQC-ALSKKCIPHNWLCD 311
C+P W CD E DC D +DE + H C + C A S +CIP W CD
Sbjct: 79 ---CVPKRWHCDGEPDCE-----DGSDERVEVCHTRTCRVNEFSCGAGSTQCIPVFWKCD 130
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
E DC D+ +++ S + C E C +S +C++L+ C+G+ DC +G D
Sbjct: 131 GEKDC------DHGEDE----MSCGNITCASLEFTC-ASGRCISLNFVCNGEDDCGDGSD 179
Query: 372 E 372
E
Sbjct: 180 E 180
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/246 (32%), Positives = 108/246 (43%), Gaps = 44/246 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +CG+ +C+ CDG DCS+G DE C F C G+C+P+ W C
Sbjct: 28 CEPSQFQCGNG-RCIPSVWQCDGDEDCSDGSDENTCVRKTCAEVDFVCRNGQCVPKRWHC 86
Query: 225 DGFVDCLEDGSDEPNTCIH--QCFNGQVQC-ALSKKCIPHNWLCDEEMDC---------- 271
DG DC EDGSDE H C + C A S +CIP W CD E DC
Sbjct: 87 DGEPDC-EDGSDERVEVCHTRTCRVNEFSCGAGSTQCIPVFWKCDGEKDCDHGEDEMSCG 145
Query: 272 ------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC + CIP N
Sbjct: 146 NITCASLEFTCASGRCISLNFVCNGEDDCGDGSDEQECAPSSCGPSEFQCG-NATCIPGN 204
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD+++DC D + + + + A C +E +CGS +C+ CDG PDC
Sbjct: 205 WVCDDDVDCQDQS--DESPQRCGRQPTPPAK-CSSSETQCGSG-ECIHRKWQCDGDPDCK 260
Query: 368 NGEDEG 373
+G DE
Sbjct: 261 DGSDEA 266
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVLCH 166
+EK+GM+G +R LV +IQWP+ + +D + LYW DS L+ + SV ++G + VL
Sbjct: 577 IEKSGMNGVDRQVLVQTDIQWPNGITLDLIKSRLYWVDSKLHMLCSVDLNGDNRRKVLQS 636
Query: 167 PNEL 170
P+ L
Sbjct: 637 PDYL 640
>gi|340728805|ref|XP_003402704.1| PREDICTED: vitellogenin receptor-like isoform 2 [Bombus terrestris]
Length = 1668
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 162/387 (41%), Gaps = 71/387 (18%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA 203
C+SH + V+ +G + C NE +C C++ C+G+ DC++ DE
Sbjct: 875 CNSHYDCVDRSDEEGC-DKKECDSNEFQC-HEGACISKYLVCNGQSDCTDFSDELNCDKH 932
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--------IHQCFNG------- 248
+C F+C +G CIP++WKCDG DC DGSDE TC + C NG
Sbjct: 933 KCDGDAFACEIGTCIPKTWKCDGEADC-PDGSDESVTCQRNACPTEMFTCSNGRCIDLVL 991
Query: 249 -------------------------------QVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
Q +C ++ C+P C+ DC +D
Sbjct: 992 KCNGVSECEDDSDEQYCKETGNRNYVNCTVDQYKCLNTELCLPKQVRCNGVTDCPKNDDE 1051
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY--FSH 335
N + + C N +KC+ +W+CD DC + D K S
Sbjct: 1052 RNCPRCQKEEYVCDN--------QKCVDKSWVCDRIDDCGDGSDEKDCDGGNSKISGISM 1103
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
N++ E +C S+ C+ + CDGK DCS+ DE C N C++ C TP
Sbjct: 1104 NSIC---KEFKC-SNGACLPFANVCDGKVDCSDRSDEFGQCATACTKYN-PCTNMCHKTP 1158
Query: 396 RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
G +C C G + C D DEC D C Q C NT+ S+ CSC E Y +R D SC
Sbjct: 1159 IGPVCGCRNGYQLSNDFKSCEDIDECK-DNVCSQICYNTNGSFTCSCHEEYVIRSDKISC 1217
Query: 454 TAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ II S+ DIR++ N
Sbjct: 1218 KVAGSQME----IITVSSADIRKLSPN 1240
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 103/213 (48%), Gaps = 14/213 (6%)
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
T +V T++++D + N CI + W+CD DC D +DE+ +
Sbjct: 11 TKRVVKATNDEYDGCVKDVNCDAFKCKDGHCIRNEWVCDGIPDCP-----DKSDEEKCEN 65
Query: 333 FSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKCSH 389
+ A C+ R N+ C++L+ C+ K +C + DE KAD C+ +C H
Sbjct: 66 YMIPADQCNNEYDRYLCKNKRCISLNATCNEKDNCGDNSDEDIDACIKADASCKEARCQH 125
Query: 390 KCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C TP GA C C G N+T C D +EC G CDQ C N+ SY CSC GY+L
Sbjct: 126 NCRKTPEGAQCSCRPGYKLVNNQTSCEDVNECGNYGICDQECINSVGSYTCSCQPGYSLN 185
Query: 448 PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
D ++C A + ++FS +IR I+LN
Sbjct: 186 DDKRTCQA----EGGEGLMMFSIKSEIRGIYLN 214
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 35/242 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECT-PGQFSCGMGKCIP 219
C+ E++CG + C+ + CDG DC NGEDE C+ + C QF C G CI
Sbjct: 811 CNAGEIKCGEHDICIKSHQRCDGIQDCPNGEDESSICDEHHWSRCKHEDQFQCKNGDCIS 870
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
++ +C+ DC+ D SDE +C + + QC CI +C+ + DC+ D
Sbjct: 871 KTKRCNSHYDCV-DRSDEEGCDKKECDSNEFQCH-EGACISKYLVCNGQSDCT-----DF 923
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE H+C C + CIP W CD E DC D +DE +V
Sbjct: 924 SDELNCDKHKCDGDAFACEIG-TCIPKTWKCDGEADCP-----DGSDE---------SVT 968
Query: 340 CH----PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS---HKCS 392
C P E+ S+ +C+ L C+G +C + DE +C + + C+ +KC
Sbjct: 969 CQRNACPTEMFTCSNGRCIDLVLKCNGVSECEDDSDE-QYCKETGNRNYVNCTVDQYKCL 1027
Query: 393 PT 394
T
Sbjct: 1028 NT 1029
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
LL S L + +D + +AGM G+N + LV+K+++ P+SL IDY + LYW D+
Sbjct: 319 LLPSSGLMYWSKWGMDSCILRAGMDGKNNTVLVSKDLELPNSLSIDYANERLYWIDAKAK 378
Query: 150 TVESVRVDGS-HNAVL 164
+ESVR+DG+ A+L
Sbjct: 379 VIESVRLDGTDRKAIL 394
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
S+D P EI+ ++ G N + +V +++ +L IDY + LYW D+ +E
Sbjct: 1362 SYDRPMTEIY-------RSNTMGTNITAIVHRDLGIVLALTIDYTRSRLYWSDTFHKNIE 1414
Query: 153 SVRVDGSHNAVL 164
S +DGS+ ++
Sbjct: 1415 SSNLDGSNRIIV 1426
>gi|302135381|gb|ADK94033.1| vitellogenin receptor [Spodoptera litura]
Length = 1789
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 140/338 (41%), Gaps = 38/338 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
CH E C S + C+ + CDG DC++G DE N C G + C +C+ S C
Sbjct: 1099 CHETEFMCASGS-CMVKTWTCDGDRDCNDGSDEINCVNMTCGLGFYQCSDSECVELSKSC 1157
Query: 225 DGFVDCL----EDGSDEPNTCIHQCFNGQVQCAL--------SKKCIPHNWLCDEEMDCS 272
DG DC E+ DEP I + +CA + C+P C+ + DC
Sbjct: 1158 DGHRDCSDYSDEEDCDEPQ--IVETMEEAPKCAAWEYTCEKNTSICLPETARCNMKTDCP 1215
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----- 327
TDE G C CI N +C+ +DC DD D T +
Sbjct: 1216 -----GGTDEHGCDHRCAPKGMFACGQQVTCITMNKVCNGRLDC--DDGSDETPDACSQV 1268
Query: 328 -DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
F E ++ QC+ S+ CD K DC +G DE C+ C N
Sbjct: 1269 NSTSHLFPVARTFTECTEGYKCNNGQCIEWSQLCDKKSDCIDGTDENGLCDTA--CANST 1326
Query: 387 CSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
C+ C PTP G C CP G +K Q C D DEC D C Q C N S++C C GY
Sbjct: 1327 CTFMCQPTPFGRRCLCPFGFQISKDQFSCEDIDECTED-VCSQGCINVPGSFLCWCHHGY 1385
Query: 445 TLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+ D + C A+ SI++ S +R I +G
Sbjct: 1386 AISSTDRRYCKAIR----GNMSILYVSGNTVRSISADG 1419
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 137/306 (44%), Gaps = 51/306 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFN------GQVQCALSKKCIPH 261
+F C G CI S CDG +DC +DGSDE N CI H+ F Q C S KC+P
Sbjct: 42 KFPCMGGGCISVSQYCDGKLDC-DDGSDE-NFCIEHKPFQEFCNEIHQYMCRDSTKCVPL 99
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS 317
+WLC+ E DC D +DE N C + KCI W+CD DC
Sbjct: 100 SWLCNNEPDCD-----DGSDEFNCTALPAVNVNSTCKGFQCGDGKCISFLWVCDGVYDCE 154
Query: 318 TDDIVDNTDEDWDKYFSH----NAVL--CHPNEL--------RCGSSNQCVALSKFCDGK 363
D +DE ++ SH +A++ + EL +C ++ C+ S CDG
Sbjct: 155 -----DKSDEYAEELCSHVSRPHAIVDGSYCQELHTMDDRNYKCLDASFCLPSSMMCDGL 209
Query: 364 PDCSNGEDEGPFCNN-KADCENLKCS---HKCSPTPRGAMCFCPAGQNPNK-----TQCV 414
DC +G DEGPFC N C+N KC CSP GA C C + QC
Sbjct: 210 QDCRDGSDEGPFCKNWNTMCDNFKCMGNDTMCSPESFGASCLCLPSHFMRQYDYITKQCQ 269
Query: 415 DADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D +ECL++ C C N Y+C C GY G C A P+ A + F++ D
Sbjct: 270 DVNECLMEHPPCSHKCINADGHYICECDPGYKRDVYGYLCYATG-PE---AMLFFNTRND 325
Query: 474 IRRIHL 479
I + +
Sbjct: 326 ISYLKI 331
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 57/128 (44%), Gaps = 25/128 (19%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMGKCIPESW 222
++ C S +CV LS C+ +PDC +G DE P N T F CG GKCI W
Sbjct: 86 HQYMCRDSTKCVPLSWLCNNEPDCDDGSDEFNCTALPAVNVNSTCKGFQCGDGKCISFLW 145
Query: 223 KCDGFVDCLEDGSDE-----------PNTCI--------HQCFNGQVQCALSKKCIPHNW 263
CDG DC ED SDE P+ + H + +C + C+P +
Sbjct: 146 VCDGVYDC-EDKSDEYAEELCSHVSRPHAIVDGSYCQELHTMDDRNYKCLDASFCLPSSM 204
Query: 264 LCDEEMDC 271
+CD DC
Sbjct: 205 MCDGLQDC 212
>gi|348529790|ref|XP_003452395.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oreochromis niloticus]
Length = 824
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 150/365 (41%), Gaps = 71/365 (19%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDE---GPFCNAE---------------- 204
C P + CG ++++CV+LS CDG+ DC NG DE P C ++
Sbjct: 90 CPPEKFDCGGAASKCVSLSWRCDGERDCENGADEEQCAPACPSKDFQCRNGKCVAPIFVC 149
Query: 205 -------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-- 243
C +F C +CIP W CDG DC + + C
Sbjct: 150 DGDDDCGDASDEEKCSAPTCGHHEFRCNDSECIPALWSCDGDPDCKDKSDESMERCSRRT 209
Query: 244 -----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
+C + QC S +C+ NW CD E DC D +DE C + QC
Sbjct: 210 EPQKPRCLVTEFQCG-SGECVHLNWKCDGEADCK-----DKSDEANCPLLTCRPDEFQCG 263
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALS 357
CI C++ DC D +DE N C P + RC + +C+ S
Sbjct: 264 -DGTCIHGTKQCNKVHDCP-----DYSDE----AGCVNVTKCDGPKKFRC-KNGECIDSS 312
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCV 414
K CD DC + DE +C N CSH C G C CP+G +K C
Sbjct: 313 KVCDNVKDCKDWSDEPVKECGLNECTDNNGGCSHICKDQRIGYECDCPSGYKLLDKKTCG 372
Query: 415 DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
D DEC +C Q C N Y C C EGY + P K+C AV + ++F++ +I
Sbjct: 373 DIDECENPDACSQICINYKGDYKCECYEGYEMDPASKTCKAVG----KSPYLLFTNRHEI 428
Query: 475 RRIHL 479
RRIHL
Sbjct: 429 RRIHL 433
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 17/128 (13%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVS-SVRLRCAQINDLLNSWDLPAPEIFPLD----- 105
L+ LA+++ H+N + + N S SV + +L + +L P +D
Sbjct: 491 LHSPEGLAVDWVHKN--IYWTDSGNKSISVATGDGRKRKMLITTELNEPRAIAVDPHQGF 548
Query: 106 ---------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV 156
++EKAGM+G +R LV+++I+WP+ + +D + LYW DS L+ + SV
Sbjct: 549 MYWSDWGGQAKIEKAGMNGVDRQILVSEHIEWPNGITLDLSNRRLYWVDSKLHLLSSVDF 608
Query: 157 DGSHNAVL 164
+G + VL
Sbjct: 609 NGDNRKVL 616
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 69/152 (45%), Gaps = 32/152 (21%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C GQ QC S CIP W CD + DC D++DE+ C C + +C
Sbjct: 9 ECETGQFQCK-SGACIPIVWRCDGDDDCP-----DSSDEENCPKKTCAATDFTCK-NGQC 61
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDG 362
+P W CD E++C+ D +DE D S C P + CG ++++CV+LS CDG
Sbjct: 62 LPARWRCDGEVECA-----DGSDEA-DSICSRQT--CPPEKFDCGGAASKCVSLSWRCDG 113
Query: 363 KPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ DCEN +C+P
Sbjct: 114 E----------------RDCENGADEEQCAPA 129
>gi|7507774|pir||T16860 hypothetical protein T13C2.4 - Caenorhabditis elegans
Length = 1357
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 146/320 (45%), Gaps = 61/320 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF-CNA---ECTPGQF-SCGMGK 216
C N +C + N C+ + CDG+ DCS+G DE P CN +C PG+ CG G+
Sbjct: 660 CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGE 718
Query: 217 CIPESWKCDGFVDCLEDGSDEPN-TCI-HQC-FNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP W+CD VDC +D SDE N T I H C + C S CI ++CD E+DCS
Sbjct: 719 CIPSRWRCDAEVDC-KDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDCS- 776
Query: 274 DDIVDNTDED--WDKFHQCFNGQVQCALSKK----------CIPHNWLCDEEMDCSTDDI 321
D +DED D +C +G+ C S CIP + C+ E DC
Sbjct: 777 ----DGSDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCP---- 828
Query: 322 VDNTDEDWDKYFSHNA-VLCHP-NELRCGSSN-QCVALSKFC-DGKPDCSNGEDEGPFCN 377
D DE K + A V C E C S+ QC+ +SK C + DC +G
Sbjct: 829 -DGGDE---KECNMTAPVTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDG-------- 876
Query: 378 NKADCENLKCSHKCSPTPRG-----------AMCFCPAGQNPNKTQCVDADECLIDGSCD 426
N + C K C P+ G +C C G QC+D +EC I G CD
Sbjct: 877 NMSVCSQKKIIEMCKPSSEGCVCRPSFVRGNNVCHCKDGYKLENGQCIDINECEIAGVCD 936
Query: 427 QTCTNTHLSYVCSCTEGYTL 446
Q C N SY C+C GY +
Sbjct: 937 QICLNIPGSYRCACHAGYQI 956
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 30/253 (11%)
Query: 164 LCHPNELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-- 212
+C E +CG +C+ CDG+ DC + DE N C QF C
Sbjct: 564 VCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDEFQCKNVSCQEKQFQCEE 623
Query: 213 ---GMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDE 267
CIPE+W CDG DC +G DE N + +C + QC+ + CI NW+CD
Sbjct: 624 LSGDYSLCIPETWVCDGQRDCT-NGKDEQNCTSKTSKCPDNNFQCS-NGNCIFKNWVCDG 681
Query: 268 EMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
E DCS +D+++ +QC G++ S +CIP W CD E+DC D++
Sbjct: 682 EEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCK-----DHS 736
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DE H L E C +S+ C+ + CDG+ DCS+G DE + + +C
Sbjct: 737 DEKNCTAIQHTCKLAE--EFACKASHNCINKAFVCDGELDCSDGSDEDDCADVRTEC--- 791
Query: 386 KCSHKCSPTPRGA 398
K + P GA
Sbjct: 792 KSGERTCPASYGA 804
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 119/250 (47%), Gaps = 40/250 (16%)
Query: 210 FSCGMGKCIPESWKCDGFVDCL--EDGSDEPNTC---IHQCFNGQVQCALSK----KCIP 260
F C G+CIP SW+CDG +DC ED + P C H+C G+V+ A S KCIP
Sbjct: 532 FQCQDGRCIPMSWRCDGDIDCQNEEDEKNCPKVCGAEEHKC--GEVKSARSSLERFKCIP 589
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALS---KKCIPHNWLCDEEMDC 316
+ W+CD E DC D +DE K C Q QC LS CIP W+CD + DC
Sbjct: 590 NKWVCDGEFDCE-----DKSDEFQCKNVSCQEKQFQCEELSGDYSLCIPETWVCDGQRDC 644
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ N K C N +C + N C+ + CDG+ DCS+G DE
Sbjct: 645 TNGKDEQNCTSKTSK--------CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDE--LL 693
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLS 435
++C + ++C P G M C +G+ P++ +C DA+ D S ++ C T +
Sbjct: 694 TAPSNCN--RTVNQCPP---GEMWKCGSGECIPSRWRC-DAEVDCKDHSDEKNC--TAIQ 745
Query: 436 YVCSCTEGYT 445
+ C E +
Sbjct: 746 HTCKLAEEFA 755
>gi|344258147|gb|EGW14251.1| Very low-density lipoprotein receptor [Cricetulus griseus]
Length = 558
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 156/329 (47%), Gaps = 52/329 (15%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
L ++ C+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++ C+G D
Sbjct: 10 LMKAQNSACIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDD 69
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--- 286
C +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE ++
Sbjct: 70 C-DDGSDELDCAPPTCGAHEFQCSTS-SCIPLSWVCDDDADCS-----DQSDESLEQCGR 122
Query: 287 ----FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+C ++QC S +CI W CD + DC D +DE + + C P
Sbjct: 123 QPVIHMKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCPSRTCRP 171
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL-KCSHKCSPTPRGAMCF 401
++ C C+ S+ C+G DC +G DE +C+N+ +C R C
Sbjct: 172 DQFEC-EDGSCIHGSRQCNGIRDCVDGSDE-------VNCKNVNQCLGPGKFKCRSGECI 223
Query: 402 CPAGQNPNKTQCVD----------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ + C D +ECL+ +G C C + + Y C C G+ L D
Sbjct: 224 DISKVCDQEQDCSDWSDEPLKECNVNECLVNNGGCSHICKDLVIGYECDCAAGFEL-IDR 282
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
K+C EP S+IF++ DIR+I L
Sbjct: 283 KTCGG-----KEP-SLIFTNRRDIRKIGL 305
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 113/253 (44%), Gaps = 29/253 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C +E C SS +CV+ + C+G+ DC +G DE C +F C CIP SW
Sbjct: 43 ITCSADEFTC-SSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTSSCIPLSW 101
Query: 223 KCDGFVDCLEDGSDEPNTC-----IH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD DC + + C IH +C ++QC S +CI W CD + DC
Sbjct: 102 VCDDDADCSDQSDESLEQCGRQPVIHMKCPASEIQCG-SGECIHKKWRCDGDPDCK---- 156
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D +DE C Q +C CI + C+ DC VD +DE N
Sbjct: 157 -DGSDEVNCPSRTCRPDQFECE-DGSCIHGSRQCNGIRDC-----VDGSDE----VNCKN 205
Query: 337 AVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCS 392
C P + +C S +C+ +SK CD + DCS+ DE P CN N+ N CSH C
Sbjct: 206 VNQCLGPGKFKC-RSGECIDISKVCDQEQDCSDWSDE-PLKECNVNECLVNNGGCSHICK 263
Query: 393 PTPRGAMCFCPAG 405
G C C AG
Sbjct: 264 DLVIGYECDCAAG 276
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N + A+ + +++ + + +S L A+ L NS DL
Sbjct: 346 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 404
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 405 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTDDIQWPNGITLDLVKSRLY 464
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV +DG ++ E
Sbjct: 465 WLDSKLHMLSSVDLDGQDRRIVLKSLEF 492
>gi|195504251|ref|XP_002099000.1| GE10672 [Drosophila yakuba]
gi|194185101|gb|EDW98712.1| GE10672 [Drosophila yakuba]
Length = 1060
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 119/400 (29%), Positives = 160/400 (40%), Gaps = 91/400 (22%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC--GMGKCIPE 220
+C C + QC+ + CDG DC +G DE A+ C+P QF+C G G+CIP
Sbjct: 264 ICSAFMTMCKNGEQCIHMEFTCDGDQDCRDGSDEMDCGRAQTCSPEQFACKSGEGECIPL 323
Query: 221 SWKCDGFVDCLEDGSDEP---------------NTCIHQCFNG-----------QVQCAL 254
SW CD DC DGSDE CI F + C L
Sbjct: 324 SWMCDQNKDC-RDGSDEAQCNKTCRSDEFTCGNGRCIQNRFKCDDDDDCGDGSDEKNCGL 382
Query: 255 SKKC------------IPHNWLCDEEMDCS-TDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
KC IP+ W+CD + DCS +D + N + F C G+ QCA
Sbjct: 383 KAKCNADSFTCRSGNCIPNQWVCDGDSDCSHGEDEMQNCTVNPLNF--CQRGEFQCADRI 440
Query: 302 KCIPHNWLCDEEMDCSTDD----------------------------IVDNTDED-WDKY 332
C+ +W+CD E DC + + N D D D
Sbjct: 441 TCLHTSWVCDGEADCPDGEDESPSNCMKSACRPDQFQCDDHTCIAGHLTCNGDRDCADGS 500
Query: 333 FSHNAVLCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDE--GPFCNNKADCE 383
N + P +E CG C+ +K CD + DC NGEDE G N+ +
Sbjct: 501 DEKNCNISAPPKSCNATSEFDCGG-GLCIPNAKVCDRRKDCPNGEDEPAGKCGINECSTK 559
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNTHLSYVCSCT 441
N C H+C G C C G + Q CVD DEC G C Q C N ++ C C
Sbjct: 560 NGGCMHQCVNLAVGYRCECHDGYKLDADQHTCVDIDECQTPGICSQVCVNEIGAFKCECE 619
Query: 442 EGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
GY + + C A + AS++ + DIR+I L+
Sbjct: 620 AGYMRVLKNHTRCKA----SEGHASLLLARRHDIRKIALD 655
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 103/244 (42%), Gaps = 44/244 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S+ +C+ + CDG DC + DE F + C QF C GKCIP+
Sbjct: 182 CDEKQFQC-STGECIPIRFVCDGSSDCRDHSDERLEECKFTESTCNQDQFRCATGKCIPQ 240
Query: 221 SWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE + C C C ++CI + CD + DC D
Sbjct: 241 RWVCDLENDC-ADGSDELMSQCRGICSAFMTMCKNGEQCIHMEFTCDGDQDCR-----DG 294
Query: 280 TDE-DWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSH 335
+DE D + C Q C + +CIP +W+CD+ DC +D+ N D++
Sbjct: 295 SDEMDCGRAQTCSPEQFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNKTCRSDEFTCG 354
Query: 336 NA---------------------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
N C+ + C S N C+ CDG DCS+
Sbjct: 355 NGRCIQNRFKCDDDDDCGDGSDEKNCGLKAKCNADSFTCRSGN-CIPNQWVCDGDSDCSH 413
Query: 369 GEDE 372
GEDE
Sbjct: 414 GEDE 417
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LN++ S DGS + +
Sbjct: 778 RIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNSISSSNYDGSQRQQVLY 837
Query: 167 PNE 169
+E
Sbjct: 838 SSE 840
>gi|442621189|ref|NP_001262971.1| lipophorin receptor 2, isoform I [Drosophila melanogaster]
gi|440217904|gb|AGB96351.1| lipophorin receptor 2, isoform I [Drosophila melanogaster]
Length = 834
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 149/366 (40%), Gaps = 66/366 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
C P E C S +C+ LS CD DC +G DE CN C +F+CG G+
Sbjct: 75 CSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQ-CNRTCRSDEFTCGNGRCIQNRFK 133
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTC-- 241
CIP W CDG DC +G DE C
Sbjct: 134 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 192
Query: 242 --IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
++ C G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 193 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 248
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 249 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGGG-LCIPNAKV 302
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 303 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 362
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 363 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 418
Query: 475 RRIHLN 480
R+I L+
Sbjct: 419 RKIALD 424
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 127/341 (37%), Gaps = 94/341 (27%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSK-KCI 259
+ C+ QF CG GKCIP W CD DC DGSDE + H C + C + +CI
Sbjct: 32 STCSQEQFRCGNGKCIPRRWVCDRENDC-ADGSDESTSQCRSHTCSPEEFACKSGEGECI 90
Query: 260 PHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQ----------------------- 294
P +W+CD+ DC +D+ N D+F C NG+
Sbjct: 91 PLSWMCDQNKDCRDGSDEAQCNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNC 149
Query: 295 ---VQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+C S CIP+ W+CD + DC N +++ C E
Sbjct: 150 GEKAKCGSNFFACKSGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEF 203
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------------FCNNKA 380
+C C+ S CDG+ DC +GEDE CN K
Sbjct: 204 QCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKR 263
Query: 381 DCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPNKTQCVDA 416
DC + C S TPR G +C CP G++ +C
Sbjct: 264 DCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGIN 323
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +G C C N + Y C C +GY L D +C ++
Sbjct: 324 ECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDID 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 547 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 606
Query: 167 PNEL 170
E
Sbjct: 607 SGEY 610
>gi|195349515|ref|XP_002041288.1| GM10225 [Drosophila sechellia]
gi|194122983|gb|EDW45026.1| GM10225 [Drosophila sechellia]
Length = 1071
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 158/409 (38%), Gaps = 109/409 (26%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC--GMGKCIPE 220
LC L C + QC+ CDG DC +G DE ++ C+P +F+C G G+CIP
Sbjct: 277 LCSSLMLMCKNGEQCIHRQSMCDGDQDCRDGSDELECGRSQTCSPEEFACKSGEGECIPL 336
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------------------------ 256
SW CD DC DGSDE C C + + C +
Sbjct: 337 SWMCDQNKDC-RDGSDEAQ-CNRTCRSDEFTCGNGRCIQNRFECDDDDDCGDGSDEKNCR 394
Query: 257 ---------------KCIPHNWLCDEEMDCST-DDIVDNTDEDWDKFHQCFNGQVQCALS 300
+CI + W+CD + DC +D + N F C G+ QC+
Sbjct: 395 EKPKCGSDSFDCKNGQCISNLWVCDGDFDCRNGEDEMQNCTVSLLNF--CQAGEFQCSDK 452
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
C+ +W+CD E DC D DE V C P++ +C + + C+A C
Sbjct: 453 ISCLQKSWVCDGEADCP-----DGEDESQSNCVK---VSCRPDQFQC-NDHSCIAGHLTC 503
Query: 361 DGKPDCSNGEDE----------------------------GPFCNNKADC---------- 382
+GK DC++G DE CN + DC
Sbjct: 504 NGKGDCADGSDEIMCAISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGK 563
Query: 383 --------ENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVDADECLIDGSCDQTCTNT 432
+N C H+C G C C G + Q CVD DEC G C Q C N
Sbjct: 564 CGINECSSKNGGCMHQCVNLEVGYRCECQDGYKLDADQHTCVDIDECETPGICSQVCVNE 623
Query: 433 HLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
S+ C C GY L + C A + AS++ S DIR+I L+
Sbjct: 624 IGSFKCECEAGYMRLLKNHTRCKA----SEGHASLLLSRRHDIRKIALD 668
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 128/294 (43%), Gaps = 52/294 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S+ QC+ + CDG DC + DE F + C+ F CG GKCIP+
Sbjct: 195 CEEKQFQC-STGQCIPIRFVCDGSSDCPDHSDERLEECKFTESTCSRDHFRCGNGKCIPQ 253
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DG+DE + C C + + C ++CI +CD + DC D
Sbjct: 254 RWVCDQENDC-ADGTDESTSLCRGLCSSLMLMCKNGEQCIHRQSMCDGDQDCR-----DG 307
Query: 280 TDE-DWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSH 335
+DE + + C + C + +CIP +W+CD+ DC +D+ N D++
Sbjct: 308 SDELECGRSQTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQCNRTCRSDEFTCG 367
Query: 336 NAVLCHPNEL---------------------RCGS------SNQCVALSKFCDGKPDCSN 368
N C N +CGS + QC++ CDG DC N
Sbjct: 368 NG-RCIQNRFECDDDDDCGDGSDEKNCREKPKCGSDSFDCKNGQCISNLWVCDGDFDCRN 426
Query: 369 GEDEGPFCN----NKADCENLKCSHKCSPTPRGAMC----FCPAGQNPNKTQCV 414
GEDE C N +CS K S + +C CP G++ +++ CV
Sbjct: 427 GEDEMQNCTVSLLNFCQAGEFQCSDKISCLQKSWVCDGEADCPDGEDESQSNCV 480
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 791 RIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTILSSNYDGSQRQQVLY 850
Query: 167 PNE 169
+E
Sbjct: 851 SSE 853
>gi|194763038|ref|XP_001963641.1| GF20503 [Drosophila ananassae]
gi|190629300|gb|EDV44717.1| GF20503 [Drosophila ananassae]
Length = 876
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/365 (29%), Positives = 158/365 (43%), Gaps = 78/365 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ + CDG+ DC + DE CT F+C G CI +++CDG DC+ D SDE
Sbjct: 105 CIPSTWQCDGENDCKDFSDEAHCNQTSCTDEHFTCLDGFCISLAFRCDGEPDCI-DNSDE 163
Query: 238 PN--TCIHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WD 285
I+ C +G+ +C S C+ + + CD + DC D +DE+
Sbjct: 164 HKCAAVINSCPDGEFKCREGLGGSGGPSGHCVLNRFRCDGDNDCG-----DWSDEENCSR 218
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C + +CA CIP W CD E DC + + D S +++ C +E
Sbjct: 219 KPSLCTTNEYKCA-DGTCIPKRWKCDREQDCDGGE----DENDCGAVNSSHSLSCGNDEF 273
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE---------GPF--------------------C 376
C + +C+ + CDG PDC++GEDE G F C
Sbjct: 274 TC-KNGRCILRTWLCDGYPDCTSGEDEVECHLQCDLGQFLCPTIQNETNHKICVHQKHIC 332
Query: 377 NNKADCEN----------------LKCSHKCSPTPRGA-MCFCPAG--QNPNKTQCVDAD 417
+ DC + ++C C T G C C G + N+ C D D
Sbjct: 333 DGYRDCPSGEDELNCPKQQKCLDPMQCEQLCIKTSLGIDECACRLGYLMDQNRINCTDID 392
Query: 418 EC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
EC L C Q C NT S++CSC GY LRPD +SC A+ +++ ++ DIR
Sbjct: 393 ECQYLTSPVCSQKCRNTIGSFICSCETGYILRPDLRSCKALG----GAMTLLVANRWDIR 448
Query: 476 RIHLN 480
R+ L+
Sbjct: 449 RVALS 453
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVL 164
++E+A M G R +++K + WP+ L IDY +YW D+ + +E +DGS N +L
Sbjct: 575 KIERAYMDGSERKIIISKGVTWPNGLAIDYPSRKIYWADAKQHAIEFSNLDGSDRNKIL 633
>gi|442621187|ref|NP_001262970.1| lipophorin receptor 2, isoform H [Drosophila melanogaster]
gi|440217903|gb|AGB96350.1| lipophorin receptor 2, isoform H [Drosophila melanogaster]
Length = 862
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 147/366 (40%), Gaps = 66/366 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
C P E C S +C+ LS CD DC +G DE CN C +F+CG G+
Sbjct: 75 CSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQ-CNRTCRSDEFTCGNGRCIQNRFK 133
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTCIH 243
CIP W CDG DC +G DE C
Sbjct: 134 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 192
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 193 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 248
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 249 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGGG-LCIPNAKV 302
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 303 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 362
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 363 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 418
Query: 475 RRIHLN 480
R+I L+
Sbjct: 419 RKIALD 424
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 127/341 (37%), Gaps = 94/341 (27%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSK-KCI 259
+ C+ QF CG GKCIP W CD DC DGSDE + H C + C + +CI
Sbjct: 32 STCSQEQFRCGNGKCIPRRWVCDRENDC-ADGSDESTSQCRSHTCSPEEFACKSGEGECI 90
Query: 260 PHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQ----------------------- 294
P +W+CD+ DC +D+ N D+F C NG+
Sbjct: 91 PLSWMCDQNKDCRDGSDEAQCNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNC 149
Query: 295 ---VQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+C S CIP+ W+CD + DC N +++ C E
Sbjct: 150 GEKAKCGSNFFACKSGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEF 203
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------------FCNNKA 380
+C C+ S CDG+ DC +GEDE CN K
Sbjct: 204 QCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKR 263
Query: 381 DCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPNKTQCVDA 416
DC + C S TPR G +C CP G++ +C
Sbjct: 264 DCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGIN 323
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +G C C N + Y C C +GY L D +C ++
Sbjct: 324 ECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDID 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 547 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 606
Query: 167 PNEL 170
E
Sbjct: 607 SGEY 610
>gi|301603656|ref|XP_002931503.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Xenopus (Silurana) tropicalis]
Length = 940
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/327 (31%), Positives = 144/327 (44%), Gaps = 34/327 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E +C ++ C+A CDG +C +G DE C PG+F CG +CI E W C
Sbjct: 154 CTPGEFQC-NNKTCLASVFVCDGVNNCGDGSDERGCLPITCKPGEFRCGNNECILEKWLC 212
Query: 225 DGFVDCLEDGSDEPNT---------CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
DG DC +D SDE I QC + +C + CI NW CD + DC
Sbjct: 213 DGQPDC-DDQSDESEAHCGLKNQPQAITQCGEHEFRCN-NGNCILLNWRCDGDEDCK--- 267
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C + QC C+ C+ DC +D++DE + S
Sbjct: 268 --DKSDEMDCHLATCRPDEFQCG-DGSCVHGMKQCNGVRDC-----LDSSDEAGCQTHSP 319
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSP 393
C + S +C+ +K CDG DC + DE + +C N CSH C
Sbjct: 320 ----CEGDGRFQCKSGECIDSTKVCDGNKDCRDWSDESLTACDINECMVNNGGCSHICRD 375
Query: 394 TPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G C CP G +K C D DEC +C Q C N + C C EGY + K+
Sbjct: 376 LKVGYECDCPVGYKLMDKKTCGDIDECENPDACSQICVNYKGDFKCECYEGYEMDSVSKT 435
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHL 479
C AV + +IF++ ++R+I +
Sbjct: 436 CKAVG----QNPYLIFTNRHELRQIDI 458
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 96/212 (45%), Gaps = 23/212 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + +C + +C+ CD DC++ DE C +F+C G CI WKC
Sbjct: 32 CEEGQFQC-RNQRCIPSVWRCDEDDDCADNSDEDDCPKTTCGEDEFTCNSGHCISARWKC 90
Query: 225 DGFVDCLEDGSDEPNTCI---HQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
DG +C + + TC C + C S KCIP +W CD E DC +N
Sbjct: 91 DGEEECPDKSDESEATCSSAKQVCAAQKFSCGGPSNKCIPVSWRCDGERDC------ENG 144
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
++ D C G+ QC +K C+ ++CD +C D +DE + C
Sbjct: 145 LDEKDCPTSCTPGEFQCN-NKTCLASVFVCDGVNNCG-----DGSDER-----GCLPITC 193
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P E RCG +N+C+ CDG+PDC + DE
Sbjct: 194 KPGEFRCG-NNECILEKWLCDGQPDCDDQSDE 224
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+T+ SV +G + +L
Sbjct: 585 KIEKAGLNGGDRQVLVSDNIEWPNGITLDVLGCRLYWVDSKLHTLSSVDFNGFNRKLL 642
>gi|432951919|ref|XP_004084924.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Oryzias latipes]
Length = 455
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/285 (34%), Positives = 139/285 (48%), Gaps = 30/285 (10%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
A C+ +F C G+CI + + CDG D D SDE + HQ C + + C+ S CI
Sbjct: 6 ATCSVEEFQCAYGRCILDIYHCDGDDD-CGDWSDESDCSSHQPCRSVEFMCS-SGMCINA 63
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD E DC D +DE C Q +C + +C+ +W CD E DCS
Sbjct: 64 GWRCDGEYDCD-----DQSDETNCTTSMCTTEQFRCG-TGRCVRLSWRCDGEDDCS---- 113
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNNK 379
D +DED + C P++ +CG+ +C+ K C+ DC +G DE P C +
Sbjct: 114 -DRSDED--GCEKTESPPCAPDQFQCGNG-RCIGQRKVCNDVNDCGDGTDEHPHHDCRPR 169
Query: 380 A-----DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNT 432
+ + N CS KC C C G + C D DEC ++G C Q CTNT
Sbjct: 170 SSDGNCNQNNGGCSQKCQMLRGLVQCTCHTGYRLLEDGKSCQDVDECAVEGYCSQGCTNT 229
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
+ C C +GY LRPD +SC A+ EP ++F++ +DIR++
Sbjct: 230 EGGFQCWCVQGYDLRPDKRSCKALG---PEPV-LLFANRIDIRQV 270
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C SS C+ CDG+ DC + DE + CT QF CG G+C+ SW+C
Sbjct: 48 CRSVEFMC-SSGMCINAGWRCDGEYDCDDQSDETNCTTSMCTTEQFRCGTGRCVRLSWRC 106
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC D SDE T C Q QC + +CI +C++ DC D TD
Sbjct: 107 DGEDDC-SDRSDEDGCEKTESPPCAPDQFQCG-NGRCIGQRKVCNDVNDCG-----DGTD 159
Query: 282 E 282
E
Sbjct: 160 E 160
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ KA ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 307 DRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVL 365
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E A M G NR + ++ WP+ L IDY +YW D+ + +E +DG + +
Sbjct: 395 RIEYANMDGSNRRVIADTHLFWPNGLTIDYASRRIYWVDAKHHVIERADLDGRNRKAV 452
>gi|354466663|ref|XP_003495793.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Cricetulus griseus]
Length = 1020
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/414 (28%), Positives = 163/414 (39%), Gaps = 90/414 (21%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
+ +E+ + G A C ++ RC +++C+ CD DCS+ DE C
Sbjct: 90 RIKVLEASELTGP--AKECEEDQFRC-RNDRCIPSVWRCDEDNDCSDNSDEDDCPKRTCA 146
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNW 263
F+C G CIPE WKCDG +C DGSDE TC + C ++ C S+KC+P +W
Sbjct: 147 DSDFTCDNGHCIPERWKCDGEEEC-PDGSDESKATCYREECPAEKLSCGPTSQKCVPASW 205
Query: 264 LCDEEMDC--STDDIVDNTDEDWDKF----HQCFNG------------------------ 293
CD E DC D+ T +F H C
Sbjct: 206 RCDGEKDCEGGADEAGCPTLCAPHEFQCSNHSCLASVFVCDGDDDCGDGSDERGCSDPAC 265
Query: 294 ---QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHPNELRC 347
+ +C CIP W+CD + DC +D D T E + C P
Sbjct: 266 PPREFRCGGGGTCIPERWVCDGQFDC--EDRSDETAELCGRVGQETMATPAACVPTTQFT 323
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE-----GP------------------FCNNKADC-- 382
S +C+ L CDG DC + DE GP CN + DC
Sbjct: 324 CRSGECIHLGWRCDGDRDCKDKSDEADCSPGPCSENDFQCGDGTCVLAIKRCNQEHDCPD 383
Query: 383 ----------------ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSC 425
N CSH C+ G C CPAG Q ++ C D DEC +C
Sbjct: 384 GSDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDAC 443
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
Q C N + C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 444 SQICVNYKGYFKCECHPGYEMDSQTKNCKAV---AGKSPSLIFTNRHEVRRIDL 494
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 618 FQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 677
Query: 164 L 164
L
Sbjct: 678 L 678
>gi|291231396|ref|XP_002735650.1| PREDICTED: low density lipoprotein receptor-related protein 1-like,
partial [Saccoglossus kowalevskii]
Length = 886
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 135/270 (50%), Gaps = 25/270 (9%)
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+CIP +W CDG DC + + P+T H C +G+ QC+ + +CI +W+CD + DC
Sbjct: 454 RCIPSAWVCDGDNDCGDASDEHPDTGCHSRLCEDGEHQCS-NGRCISESWVCDHDDDCG- 511
Query: 274 DDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D++DE F C + Q +CA S+ CIP W CD + DC D D D + +
Sbjct: 512 ----DSSDEPRTCVFPDCDSNQFRCANSR-CIPSQWQCDGDNDCH--DFSDEADTNPNCK 564
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
S C +E RC S QC+A + C+G DC + DE N+ +N CSH C
Sbjct: 565 TSD----CSDDEYRC-SDGQCIAEHQVCNGANDCDS--DELHCGINECAHDNGGCSHICD 617
Query: 393 PTPRGAMCFCPAGQNPNK--TQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
G C CP G + +K C D +EC + C Q C N S+ C CT GY L P+
Sbjct: 618 DRISGYKCLCPEGYSLDKDGITCKDFNECENVTLPCSQLCHNDIGSFRCYCTHGYELEPN 677
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G +C +E ++FS+ IR++ L
Sbjct: 678 GHTCKHAT---NEEPFLLFSNRYYIRKLGL 704
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 102/271 (37%), Gaps = 77/271 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C + +C+ + CDG C +G DE A C G+F CG KCI ++C
Sbjct: 222 CRSNYFSC-DNGRCILENFKCDGANHCGDGSDEHDCVAAVCGDGEFQCGNDKCISMEFRC 280
Query: 225 DGFVDCLEDGSDE----PNTC-----------IHQCFNGQVQCALSKKCIPHNWLCDEEM 269
D +DC +D SDE P C I Q + C + +CI W CD E
Sbjct: 281 DQDLDC-QDASDEIGCDPVDCAAYRPRGFTIPIGQLIPTYINCKRTTQCILPEWRCDGED 339
Query: 270 DCSTDDIVDNTDED----------------------------WDKF-------------- 287
DC D++DE+ W+
Sbjct: 340 DCG-----DSSDEEGCGSAGPSLLTCPPLYFRCDSGRCVPPSWECDGDDDCGDGSDEHHD 394
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--AVLCHPN 343
C Q C ++KCIP+ W+CD + DC + D + HN V C
Sbjct: 395 CNFACGEDQYTCD-NQKCIPNRWICDNDDDCGDNSDEDGS--------KHNCTQVTCDAE 445
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
RC + +C+ + CDG DC + DE P
Sbjct: 446 HFRCVEARRCIPSAWVCDGDNDCGDASDEHP 476
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 126/318 (39%), Gaps = 50/318 (15%)
Query: 95 DLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A ++ D RL E+ + G R +V+ L + N LYW D V
Sbjct: 40 DHKAARLYWSDARLDKLERCKLDGTERVVIVSGEPVHSFGLAVYGN--YLYWTDWVRRAV 97
Query: 152 ESV-RVDGSHNAVL------------CHPNELRCGSSNQCVALSKFCDGKPDC---SNGE 195
V + G VL N+ +N+C L+ CD C + GE
Sbjct: 98 IRVNKYTGEEVLVLRGNIAQQPMGIVAVANDTEDCDANKCRQLNGGCDSNGVCDIDARGE 157
Query: 196 D-----------EGPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT- 240
+G C CT +F C G CIP + CD +C +DGSDE T
Sbjct: 158 VHCTCPTGFQIVDGTRCVDAGFNCTNLEFKCNDGACIPYEFTCDRIEEC-DDGSDEDQTY 216
Query: 241 -CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
C + C + +CI N+ CD C D +DE C +G+ QC
Sbjct: 217 CATRSCRSNYFSCD-NGRCILENFKCDGANHCG-----DGSDEHDCVAAVCGDGEFQCG- 269
Query: 300 SKKCIPHNWLCDEEMDC--STDDI-VDNTD--EDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+ KCI + CD+++DC ++D+I D D + F+ P + C + QC+
Sbjct: 270 NDKCISMEFRCDQDLDCQDASDEIGCDPVDCAAYRPRGFTIPIGQLIPTYINCKRTTQCI 329
Query: 355 ALSKFCDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 330 LPEWRCDGEDDCGDSSDE 347
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE----------- 106
LA+++ RN C + + +L + +L + +L P LD
Sbjct: 771 LAVDWVGRNLYWCDKGKDTIEVSKLD-GRFRKVLINKELDEPRALALDPFNGYMYWTDWG 829
Query: 107 ---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ +AGM G + + LVT+ + WP+ L IDY +YW D+ + +ES+ ++G+
Sbjct: 830 AKPYIGRAGMDGSDVTRLVTEKLGWPNGLTIDYGSQRIYWADAREDYIESINMNGT 885
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 136/365 (37%), Gaps = 75/365 (20%)
Query: 93 SWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
+W+ +P I KA G + ++ +IQ P+ L ID+ LYW D+ L+ +E
Sbjct: 5 NWNDESPSIM-------KAFQGGFDMHSIIDTDIQTPNGLTIDHKAARLYWSDARLDKLE 57
Query: 153 SVRVDGSHNAVLCHPNELRCGS--------------SNQCVALSKFCDGKPDCSNGE-DE 197
++DG+ V+ + + ++K+ + G +
Sbjct: 58 RCKLDGTERVVIVSGEPVHSFGLAVYGNYLYWTDWVRRAVIRVNKYTGEEVLVLRGNIAQ 117
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-------------TCI-- 242
P C KC + CD C D E + C+
Sbjct: 118 QPMGIVAVANDTEDCDANKCRQLNGGCDSNGVCDIDARGEVHCTCPTGFQIVDGTRCVDA 177
Query: 243 -HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCAL 299
C N + +C CIP+ + CD +C D +DED + C + C
Sbjct: 178 GFNCTNLEFKCN-DGACIPYEFTCDRIEECD-----DGSDEDQTYCATRSCRSNYFSCD- 230
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALS 357
+ +CI N+ CD C D +DE H+ A +C E +CG +++C+++
Sbjct: 231 NGRCILENFKCDGANHCG-----DGSDE-------HDCVAAVCGDGEFQCG-NDKCISME 277
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDA 416
CD DC + DE C+ + C+ + PRG P GQ P C
Sbjct: 278 FRCDQDLDCQDASDE-------IGCDPVDCA---AYRPRGFT--IPIGQLIPTYINCKRT 325
Query: 417 DECLI 421
+C++
Sbjct: 326 TQCIL 330
>gi|432099574|gb|ELK28715.1| Low-density lipoprotein receptor [Myotis davidii]
Length = 738
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 136/298 (45%), Gaps = 38/298 (12%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFN--G 248
E P C +F C GKCI W CDG +C +D SDE TC + F+ G
Sbjct: 14 EMPAVEGNCERNEFQCQDGKCIAYKWVCDGRAEC-QDQSDESQETCKSVTCKVEDFSCGG 72
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
+V +CIP W CD ++DC + +DE C + QC CI +
Sbjct: 73 RVN-----RCIPEFWRCDGQIDCE-----NGSDEQGCSMATCRPDEFQC-FDGTCIHGSQ 121
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCS 367
CD E DC D +DE N LC PN+ +C S +C+ + K C+ DC
Sbjct: 122 QCDREHDCK-----DMSDE----LGCINVTLCEGPNKFKC-HSGECITMDKVCNSVRDCR 171
Query: 368 NGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGS 424
+ DE +C K CSH C G C CP G + ++ +C D DEC +
Sbjct: 172 DWSDEPLKECETNECLTNKGGCSHLCKDLKIGYECLCPEGFRLADQRRCEDIDECEDPDT 231
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C Q C N+ SY C C EG+ L P K+C AV D A + F++ ++R++ L+ S
Sbjct: 232 CSQLCVNSVGSYQCKCEEGFRLDPFTKACKAV----DTIAYLFFTNRHEVRKMTLDRS 285
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT++IQWP+ + +D + D LYW DS L+++ S
Sbjct: 403 WGTPA--------KIKKGGLNGVDIHSLVTEDIQWPNGITLDLSSDRLYWVDSKLHSISS 454
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ + G H L HP L
Sbjct: 455 IDLTGGHRKTILEDKKRLAHPFSL 478
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
+V C + CG N+C+ CDG+ DC NG DE A C P +F C G CI
Sbjct: 59 KSVTCKVEDFSCGGRVNRCIPEFWRCDGQIDCENGSDEQGCSMATCRPDEFQCFDGTCIH 118
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDC 271
S +CD DC +D SDE CI+ + +C S +CI + +C+ DC
Sbjct: 119 GSQQCDREHDC-KDMSDELG-CINVTLCEGPNKFKCH-SGECITMDKVCNSVRDC 170
>gi|194743774|ref|XP_001954375.1| GF18235 [Drosophila ananassae]
gi|190627412|gb|EDV42936.1| GF18235 [Drosophila ananassae]
Length = 1068
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 152/371 (40%), Gaps = 67/371 (18%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
++ C P + C S +C+ L+ CD DC +G DE CN C +F+CG G C+
Sbjct: 309 SSTTCTPEQFTC-KSGECIPLAWMCDQHSDCRDGSDEAQ-CNKTCRSDEFTCGNGHCVQN 366
Query: 221 SWKCD----------------------GFVDCLEDG-----------------SDEPNTC 241
+KCD G C G +DE C
Sbjct: 367 RFKCDRDDDCGDGSDERNCGAVNKCPPGAFTCPTGGCISQEWVCDGDDDCIDGADEKQNC 426
Query: 242 -------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+H C N + QC C+ W+CD E DC D D + E+ C Q
Sbjct: 427 SAKAGGDLHFCQNNEFQCNDRTTCLHRTWVCDGEKDCP--DGEDESSENCPTV-TCRPDQ 483
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QC + CI N +C+ + DC+ D TDE + +E CG QC+
Sbjct: 484 FQCR-DRSCIAGNLICNGQGDCA-----DGTDEVNCNITAPIKPCNTTSEFDCGGG-QCI 536
Query: 355 ALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNK 410
L+K CD + DC NGEDE G N+ N C H C G C C AG P+
Sbjct: 537 PLAKVCDRRKDCPNGEDEPAGKCSVNECATANGGCMHTCVNLAVGYRCECHAGYKLAPDN 596
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFS 469
CVD DEC G C Q C N S+ C C EGY + + C A + AS++ +
Sbjct: 597 RSCVDIDECETPGVCSQQCINQVGSFKCECQEGYMRVMHNHTRCKA----SEGHASLLLT 652
Query: 470 STVDIRRIHLN 480
DIR+I L+
Sbjct: 653 RRHDIRKIALD 663
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 151/381 (39%), Gaps = 91/381 (23%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-F 200
Y CD + ++ S + C+ N + C + QCV +S CDG DC + DE
Sbjct: 249 YVCDREADCADASDESRSRCGLQCNSNMVMCKNGEQCVHMSFLCDGDDDCRDKSDEENCA 308
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP---NTCI---HQCFNG------ 248
+ CTP QF+C G+CIP +W CD DC DGSDE TC C NG
Sbjct: 309 SSTTCTPEQFTCKSGECIPLAWMCDQHSDC-RDGSDEAQCNKTCRSDEFTCGNGHCVQNR 367
Query: 249 --------------QVQCALSKKCIPHNWLC----------------------DEEMDCS 272
+ C KC P + C DE+ +CS
Sbjct: 368 FKCDRDDDCGDGSDERNCGAVNKCPPGAFTCPTGGCISQEWVCDGDDDCIDGADEKQNCS 427
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D H C N + QC C+ W+CD E DC D DE
Sbjct: 428 AKAGGD--------LHFCQNNEFQCNDRTTCLHRTWVCDGEKDCP-----DGEDES---- 470
Query: 333 FSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPF--CNNKA-- 380
S N V C P++ +C C+A + C+G+ DC++G DE P CN +
Sbjct: 471 -SENCPTVTCRPDQFQC-RDRSCIAGNLICNGQGDCADGTDEVNCNITAPIKPCNTTSEF 528
Query: 381 DCENLKCSHKCSPTPRGAMCF----CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
DC +C P +C CP G++ +C + +G C TC N + Y
Sbjct: 529 DCGGGQC------IPLAKVCDRRKDCPNGEDEPAGKCSVNECATANGGCMHTCVNLAVGY 582
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
C C GY L PD +SC ++
Sbjct: 583 RCECHAGYKLAPDNRSCVDID 603
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S C+ + CDG DC + DE F + C QF CG G CIP
Sbjct: 189 CGEKQFQC-SPGVCIPIRFVCDGDSDCQDHSDERLEECKFKESTCRSDQFRCGNGMCIPL 247
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CD DC + + + C QC + V C ++C+ ++LCD + DC D +
Sbjct: 248 GYVCDREADCADASDESRSRCGLQCNSNMVMCKNGEQCVHMSFLCDGDDDCR-----DKS 302
Query: 281 DED-WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
DE+ C Q C S +CIP W+CD+ DC
Sbjct: 303 DEENCASSTTCTPEQFTCK-SGECIPLAWMCDQHSDC 338
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D +YW D LN + S DGS + +
Sbjct: 786 RIERAGMDGSHRTAIITYDVKWPNGITLDLVLKRIYWVDGKLNIISSANFDGSQRRQVLY 845
Query: 167 PNE 169
+E
Sbjct: 846 SSE 848
>gi|161078643|ref|NP_001097926.1| lipophorin receptor 2, isoform C [Drosophila melanogaster]
gi|158030397|gb|ABW08766.1| lipophorin receptor 2, isoform C [Drosophila melanogaster]
Length = 1029
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 147/366 (40%), Gaps = 66/366 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C S +C+ LS CD DC +G DE CN C +F+CG G+CI
Sbjct: 277 CSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQ-CNRTCRSDEFTCGNGRCIQNRFK 335
Query: 219 -----------------------------------PESWKCDGFVDCLEDGSDEPNTCIH 243
P W CDG DC +G DE C
Sbjct: 336 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 394
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 395 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 450
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 451 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGG-GLCIPNAKV 504
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 505 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 564
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 565 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 620
Query: 475 RRIHLN 480
R+I L+
Sbjct: 621 RKIALD 626
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 146/384 (38%), Gaps = 99/384 (25%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + +C S+ +C+ + CDG DC + DE F + C+ QF CG GKCIP
Sbjct: 192 YCDEKQFQC-STGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIP 250
Query: 220 ESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STD 274
W CD DC DGSDE + H C + C + +CIP +W+CD+ DC +D
Sbjct: 251 RRWVCDRENDC-ADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSD 309
Query: 275 DIVDNTDEDWDKFHQCFNGQ--------------------------VQCA------LSKK 302
+ N D+F C NG+ +C S
Sbjct: 310 EAQCNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGP 368
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP+ W+CD + DC N +++ C E +C C+ S CDG
Sbjct: 369 CIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDG 422
Query: 363 KPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC--SPTP 395
+ DC +GEDE CN K DC + C S TP
Sbjct: 423 EADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISATP 482
Query: 396 R-----------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
R G +C CP G++ +C + +G C C N
Sbjct: 483 RTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLE 542
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVN 457
+ Y C C +GY L D +C ++
Sbjct: 543 VGYRCECHDGYKLGADQHTCVDID 566
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 749 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 808
Query: 167 PNEL 170
E
Sbjct: 809 SGEY 812
>gi|432095599|gb|ELK26737.1| Low-density lipoprotein receptor-related protein 8 [Myotis davidii]
Length = 795
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 127/282 (45%), Gaps = 25/282 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C G+CIP W+CD DC D SDE + C + C + CIP W
Sbjct: 80 ECEEDQFRCQNGRCIPSVWRCDEDDDC-SDNSDEDDCPKKTCMDTDFTCD-NGHCIPERW 137
Query: 264 LCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDD 320
CD E +CS D +DE C ++ C S KC+P +W CD E DC +
Sbjct: 138 KCDGEEECS-----DGSDEFQATCPKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCES-- 190
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DE + + C +E +CG CV K CD + DC +G DE
Sbjct: 191 ---GADE---AGCATSLGTCRGDEFQCG-DGACVPAVKRCDQEQDCPDGSDEAGCLMGLN 243
Query: 381 DC--ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+C N CSH C+ G C CPAG ++ C D DEC +C Q C N +
Sbjct: 244 ECLHNNGGCSHICNDLKVGFECTCPAGYRLLDQKTCGDIDECEDPDACSQICVNYKGYFK 303
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY + K+C AV S+IF++ ++RRI L
Sbjct: 304 CECHPGYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 342
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + ++ L S DL P +D
Sbjct: 401 LHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLF-SHDLSEPRAIAVDPLRGFM 459
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ +I+WP+ + +D LYW DS L+ + S+
Sbjct: 460 YWSDWGYQAKIEKSGLNGADRHTLVSDDIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFS 519
Query: 158 GSHNAVL 164
G H +L
Sbjct: 520 GGHRKML 526
>gi|345800484|ref|XP_003434708.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Canis lupus familiaris]
Length = 901
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 158/399 (39%), Gaps = 83/399 (20%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G A +C ++ RC + +C+ CD DCS+ DE C F+CG G C
Sbjct: 42 GQGPAKVCEEDQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCGNGHC 100
Query: 218 IPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC-ST 273
IPE WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC S
Sbjct: 101 IPERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPASHKCVPASWRCDGEKDCESG 159
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCAL---------------------------------S 300
D QC N A+
Sbjct: 160 ADEAGCATLCAPHEFQCSNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGGG 219
Query: 301 KKCIPHNWLCDEEMDC--STDDIVD--------------------------------NTD 326
CIP W+CD + DC +D+ D + D
Sbjct: 220 GTCIPERWVCDRQFDCEDRSDEAADLCPGATAAPAACAAAAQFACRSGECVHLGWRCDGD 279
Query: 327 ED-WDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC- 382
D DK + L C +E +CG CV K C+ + DC +G DE +C
Sbjct: 280 RDCKDKSDEADCPLGTCRGDEFQCGDGT-CVPTLKRCNQEQDCPDGSDEAGCLQGLNECL 338
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 339 HNNGGCSHICTDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCEC 398
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV + S+IF++ ++RRI L
Sbjct: 399 HPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 434
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + A+ L S DL P +D
Sbjct: 493 LHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLF-SRDLSEPRAIAVDPLRGFM 551
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 552 YWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLS 611
Query: 158 GSHNAVL 164
G + +L
Sbjct: 612 GGNRKML 618
>gi|291414136|ref|XP_002723323.1| PREDICTED: low density lipoprotein receptor [Oryctolagus cuniculus]
Length = 831
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 139/313 (44%), Gaps = 38/313 (12%)
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------- 237
CD +PDC G DE + +P F C C+P W CDG DC +DGSDE
Sbjct: 109 CDEEPDCPXGSDEASCAPSTXSPAHFRCNSSSCVPALWACDGEPDC-DDGSDEWPARCGA 167
Query: 238 ---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
P + C S +C+ +W CD + DC D +DE C +
Sbjct: 168 RPSPQPGRGPSPRHEFHCG-SGECVHASWRCDGDADCR-----DGSDERDCAAATCRPDE 221
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQC 353
QC+ CI + CD++ DC D +DE N LC P++ +C S +C
Sbjct: 222 FQCS-DGTCIHGSRQCDQQQDCG-----DMSDE----VGCVNVTLCEGPDKFKC-HSGEC 270
Query: 354 VALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-PN 409
++L K C+ DC + DE P N+ N CSH C G C CP G +
Sbjct: 271 ISLDKVCNSARDCQDWSDE-PIKECATNECMRGNGGCSHTCFDLRIGHECHCPKGYRLVD 329
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
+ +C D +EC C Q C N SY C C G+ L P ++C AV D A + F+
Sbjct: 330 QRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPHSQACKAV----DSIAYLFFT 385
Query: 470 STVDIRRIHLNGS 482
+ ++R++ L+ S
Sbjct: 386 NRHEVRKMTLDRS 398
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 84/195 (43%), Gaps = 47/195 (24%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALS-KKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 23 KCGRNEFQCRNGKCISYKWVCDGSSEC-QDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIP 81
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD + DC D+ H Q+ C +S+ + CDEE DC
Sbjct: 82 GHWKCDGQQDCE------------DRSH-----QLGCGISRL-----FGCDEEPDCPX-- 117
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
+DE S P RC SS+ CV CDG+PDC +G DE P
Sbjct: 118 ---GSDE-----ASCAPSTXSPAHFRCNSSS-CVPALWACDGEPDCDDGSDEWP------ 162
Query: 381 DCENLKCSHKCSPTP 395
+C + SP P
Sbjct: 163 ----ARCGARPSPQP 173
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A R ++L + ++ + A W +PA
Sbjct: 470 YWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMYWTDWGVPA-------- 521
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++EK G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 522 KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLE 581
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 582 DEQRLAHPFSL 592
>gi|161078647|ref|NP_001097928.1| lipophorin receptor 2, isoform E [Drosophila melanogaster]
gi|33589552|gb|AAQ22543.1| LD11117p [Drosophila melanogaster]
gi|158030399|gb|ABW08768.1| lipophorin receptor 2, isoform E [Drosophila melanogaster]
Length = 1064
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 147/366 (40%), Gaps = 66/366 (18%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C P E C S +C+ LS CD DC +G DE CN C +F+CG G+CI
Sbjct: 277 CSPEEFACKSGEGECIPLSWMCDQNKDCRDGSDEAQ-CNRTCRSDEFTCGNGRCIQNRFK 335
Query: 219 -----------------------------------PESWKCDGFVDCLEDGSDEPNTCIH 243
P W CDG DC +G DE C
Sbjct: 336 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 394
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 395 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 450
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 451 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGG-GLCIPNAKV 504
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 505 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 564
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 565 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 620
Query: 475 RRIHLN 480
R+I L+
Sbjct: 621 RKIALD 626
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 146/384 (38%), Gaps = 99/384 (25%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + +C S+ +C+ + CDG DC + DE F + C+ QF CG GKCIP
Sbjct: 192 YCDEKQFQC-STGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIP 250
Query: 220 ESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STD 274
W CD DC DGSDE + H C + C + +CIP +W+CD+ DC +D
Sbjct: 251 RRWVCDRENDC-ADGSDESTSQCRSHTCSPEEFACKSGEGECIPLSWMCDQNKDCRDGSD 309
Query: 275 DIVDNTDEDWDKFHQCFNGQ--------------------------VQCA------LSKK 302
+ N D+F C NG+ +C S
Sbjct: 310 EAQCNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGP 368
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP+ W+CD + DC N +++ C E +C C+ S CDG
Sbjct: 369 CIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWVCDG 422
Query: 363 KPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC--SPTP 395
+ DC +GEDE CN K DC + C S TP
Sbjct: 423 EADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDISATP 482
Query: 396 R-----------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
R G +C CP G++ +C + +G C C N
Sbjct: 483 RTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLE 542
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVN 457
+ Y C C +GY L D +C ++
Sbjct: 543 VGYRCECHDGYKLGADQHTCVDID 566
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 749 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 808
Query: 167 PNEL 170
E
Sbjct: 809 SGEY 812
>gi|157127000|ref|XP_001661035.1| low-density lipoprotein receptor (ldl) [Aedes aegypti]
gi|108873056|gb|EAT37281.1| AAEL010712-PA [Aedes aegypti]
Length = 2036
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 157/384 (40%), Gaps = 92/384 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + C + CV + CDG DC++ DE C +CT +F C G CI S++C
Sbjct: 310 CSPGKFMC-QNELCVPMEWVCDGDDDCNDQSDERN-CTRQCTQDEFRCRDGSCISASFEC 367
Query: 225 DGFVDCLEDGSDEPNTC---IHQCFNGQVQCALSK--------KCIPHNWLCDEEMDCST 273
DG DC+ D SDE N C + C G+ +C + +C+ + + CD + DC
Sbjct: 368 DGEPDCI-DESDE-NACDRPMQICPEGEFKCKGTLGGLGGPGGRCVLNRFRCDGDNDCG- 424
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDE 327
DW C QV C ++ CIP W CD++ DC+ + D
Sbjct: 425 ---------DWSDEEGCPKKQVMCTANEFKCDDGDCIPVQWRCDDKQDCNNGE--DEKGC 473
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------------- 373
DK C P+E C +C+ S CDG DC GEDE
Sbjct: 474 PVDKLAGRT---CSPDEFTC-KDGRCILRSWVCDGTADCKRGEDEQDCEIKCEINQFACS 529
Query: 374 ---------PFCNNKA-------DCEN----LKCS--HKC-----------SPTPRGAMC 400
P C N+ DC N L+C H+C + C
Sbjct: 530 SSSRNSSSDPLCINQKNVCDGHKDCVNGEDELRCPIVHRCGAHSSCEQQCMTAYSGREEC 589
Query: 401 FCPAG--QNPNKTQCVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C G + N C D DEC I + C Q C NT SY C C GY LRPD ++C AV
Sbjct: 590 KCRMGFLLHGNGYNCTDIDECKITSNPVCSQECINTMGSYRCDCKPGYVLRPDNRTCKAV 649
Query: 457 NVPQDEPASIIFSSTVDIRRIHLN 480
++ ++ DIR++ L+
Sbjct: 650 G----GAVKLLMANRADIRQVSLS 669
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E+AGM G R LV++N+QWP+ L +D + LY+ D +E V DG+
Sbjct: 1104 IERAGMDGSGRVTLVSENLQWPNGLALDTDNHRLYFVDGGTKLLEFVNFDGT 1155
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A M G R +V+++I WP+ L IDY + +YW D+ + +ES DG
Sbjct: 791 KIERAFMDGSVRRTIVSESIFWPNGLAIDYTTNRIYWADAK-HVIESADFDG 841
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+A M GE+R +VT ++ + S L +D ++ +YW DS +ES +G+ +L
Sbjct: 1409 IERADMDGEHRKRIVTTDLGFVSGLAVDSVENRIYWTDSKAKRIESCDFNGNSRKILLNN 1468
Query: 166 --HPNELRCGSSN 176
HP L +S
Sbjct: 1469 LSHPYALTVTTST 1481
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
R+E+A M G R ++ + +P+ L ID+ LYW D+ + +E DG
Sbjct: 1714 RIERAYMDGSERRSIIDSELGFPTGLAIDFAMKKLYWADAQQDRIEMCDFDGKRRT 1769
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G + ++ N+ P+ L +D+ D +YW D+ N +E DG +L
Sbjct: 1017 ISRAFINGSQQEAIIKSNLISPAGLALDWITDKIYWTDAGTNRIEVASTDGKQRTLL 1073
>gi|345800482|ref|XP_546704.3| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Canis lupus familiaris]
Length = 960
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 158/399 (39%), Gaps = 83/399 (20%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G A +C ++ RC + +C+ CD DCS+ DE C F+CG G C
Sbjct: 42 GQGPAKVCEEDQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCGNGHC 100
Query: 218 IPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC-ST 273
IPE WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC S
Sbjct: 101 IPERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPASHKCVPASWRCDGEKDCESG 159
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCAL---------------------------------S 300
D QC N A+
Sbjct: 160 ADEAGCATLCAPHEFQCSNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGGG 219
Query: 301 KKCIPHNWLCDEEMDC--STDDIVD--------------------------------NTD 326
CIP W+CD + DC +D+ D + D
Sbjct: 220 GTCIPERWVCDRQFDCEDRSDEAADLCPGATAAPAACAAAAQFACRSGECVHLGWRCDGD 279
Query: 327 ED-WDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC- 382
D DK + L C +E +CG CV K C+ + DC +G DE +C
Sbjct: 280 RDCKDKSDEADCPLGTCRGDEFQCGDGT-CVPTLKRCNQEQDCPDGSDEAGCLQGLNECL 338
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 339 HNNGGCSHICTDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCEC 398
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV + S+IF++ ++RRI L
Sbjct: 399 HPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 434
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + A+ L S DL P +D
Sbjct: 493 LHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLF-SRDLSEPRAIAVDPLRGFM 551
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 552 YWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLS 611
Query: 158 GSHNAVL 164
G + +L
Sbjct: 612 GGNRKML 618
>gi|71995462|ref|NP_495387.2| Protein T13C2.6, isoform a [Caenorhabditis elegans]
gi|351062359|emb|CCD70327.1| Protein T13C2.6, isoform a [Caenorhabditis elegans]
Length = 909
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 147/320 (45%), Gaps = 61/320 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF-CNA---ECTPGQ-FSCGMGK 216
C N +C + N C+ + CDG+ DCS+G DE P CN +C PG+ + CG G+
Sbjct: 166 CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGE 224
Query: 217 CIPESWKCDGFVDCLEDGSDEPN-TCI-HQC-FNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP W+CD VDC +D SDE N T I H C + C S CI ++CD E+DCS
Sbjct: 225 CIPSRWRCDAEVDC-KDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDCS- 282
Query: 274 DDIVDNTDED--WDKFHQCFNGQVQCALSKK----------CIPHNWLCDEEMDCSTDDI 321
D +DED D +C +G+ C S CIP + C+ E DC
Sbjct: 283 ----DGSDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCP---- 334
Query: 322 VDNTDEDWDKYFSHNA-VLCHPN-ELRCGSSN-QCVALSKFC-DGKPDCSNGEDEGPFCN 377
D DE K + A V C E C S+ QC+ +SK C + DC +G
Sbjct: 335 -DGGDE---KECNMTAPVTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDG-------- 382
Query: 378 NKADCENLKCSHKCSPTPRGAMC-----------FCPAGQNPNKTQCVDADECLIDGSCD 426
N + C K C P+ G +C C G QC+D +EC I G CD
Sbjct: 383 NMSVCSQKKIIEMCKPSSEGCVCRPSFVRGNNVCHCKDGYKLENGQCIDINECEIAGVCD 442
Query: 427 QTCTNTHLSYVCSCTEGYTL 446
Q C N SY C+C GY +
Sbjct: 443 QICLNIPGSYRCACHAGYQI 462
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 30/253 (11%)
Query: 164 LCHPNELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-- 212
+C E +CG +C+ CDG+ DC + DE N C QF C
Sbjct: 70 VCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDEFQCKNVSCQEKQFQCEE 129
Query: 213 ---GMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDE 267
CIPE+W CDG DC +G DE N + +C + QC+ + CI NW+CD
Sbjct: 130 LSGDYSLCIPETWVCDGQRDCT-NGKDEQNCTSKTSKCPDNNFQCS-NGNCIFKNWVCDG 187
Query: 268 EMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
E DCS +D+++ +QC G++ S +CIP W CD E+DC D++
Sbjct: 188 EEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCK-----DHS 242
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DE H L E C +S+ C+ + CDG+ DCS+G DE + + +C
Sbjct: 243 DEKNCTAIQHTCKL--AEEFACKASHNCINKAFVCDGELDCSDGSDEDDCADVRTEC--- 297
Query: 386 KCSHKCSPTPRGA 398
K + P GA
Sbjct: 298 KSGERTCPASYGA 310
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 116/250 (46%), Gaps = 40/250 (16%)
Query: 210 FSCGMGKCIPESWKCDGFVDCL--EDGSDEPNTCI---HQCFNGQVQCALSK----KCIP 260
F C G+CIP SW+CDG +DC ED + P C H+C G+V+ A S KCIP
Sbjct: 38 FQCQDGRCIPMSWRCDGDIDCQNEEDEKNCPKVCGAEEHKC--GEVKSARSSLERFKCIP 95
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALS---KKCIPHNWLCDEEMDC 316
+ W+CD E DC D +DE K C Q QC LS CIP W+CD + DC
Sbjct: 96 NKWVCDGEFDCE-----DKSDEFQCKNVSCQEKQFQCEELSGDYSLCIPETWVCDGQRDC 150
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
+ N K C N +C + N C+ + CDG+ DCS+G DE
Sbjct: 151 TNGKDEQNCTSKTSK--------CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDELLTA 201
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLS 435
+ C+ + P G M C +G+ P++ +C DA+ D S ++ C T +
Sbjct: 202 PS-------NCNRTVNQCPPGEMWKCGSGECIPSRWRC-DAEVDCKDHSDEKNC--TAIQ 251
Query: 436 YVCSCTEGYT 445
+ C E +
Sbjct: 252 HTCKLAEEFA 261
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 90 LLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKN-IQWPSSLVI 134
+L S DL P +D R+E++GM G++R+ +V + + WP+ L +
Sbjct: 605 VLYSSDLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLAL 664
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
DY +YW D+ + ++ S G + + H ++
Sbjct: 665 DYVDKRVYWADAKIKSIFSCDYWGKNIKTVLHSHQY 700
>gi|71995467|ref|NP_872023.2| Protein T13C2.6, isoform b [Caenorhabditis elegans]
gi|351062360|emb|CCD70328.1| Protein T13C2.6, isoform b [Caenorhabditis elegans]
Length = 911
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/320 (35%), Positives = 147/320 (45%), Gaps = 61/320 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPF-CNA---ECTPGQ-FSCGMGK 216
C N +C + N C+ + CDG+ DCS+G DE P CN +C PG+ + CG G+
Sbjct: 168 CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGE 226
Query: 217 CIPESWKCDGFVDCLEDGSDEPN-TCI-HQC-FNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP W+CD VDC +D SDE N T I H C + C S CI ++CD E+DCS
Sbjct: 227 CIPSRWRCDAEVDC-KDHSDEKNCTAIQHTCKLAEEFACKASHNCINKAFVCDGELDCS- 284
Query: 274 DDIVDNTDED--WDKFHQCFNGQVQCALSKK----------CIPHNWLCDEEMDCSTDDI 321
D +DED D +C +G+ C S CIP + C+ E DC
Sbjct: 285 ----DGSDEDDCADVRTECKSGERTCPASYGAYGAESGHVVCIPASSWCNGEEDCP---- 336
Query: 322 VDNTDEDWDKYFSHNA-VLCHPN-ELRCGSSN-QCVALSKFC-DGKPDCSNGEDEGPFCN 377
D DE K + A V C E C S+ QC+ +SK C + DC +G
Sbjct: 337 -DGGDE---KECNMTAPVTCQKGTEYECPSTPLQCIEMSKLCASAQFDCGDG-------- 384
Query: 378 NKADCENLKCSHKCSPTPRGAMC-----------FCPAGQNPNKTQCVDADECLIDGSCD 426
N + C K C P+ G +C C G QC+D +EC I G CD
Sbjct: 385 NMSVCSQKKIIEMCKPSSEGCVCRPSFVRGNNVCHCKDGYKLENGQCIDINECEIAGVCD 444
Query: 427 QTCTNTHLSYVCSCTEGYTL 446
Q C N SY C+C GY +
Sbjct: 445 QICLNIPGSYRCACHAGYQI 464
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 30/253 (11%)
Query: 164 LCHPNELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-- 212
+C E +CG +C+ CDG+ DC + DE N C QF C
Sbjct: 72 VCGAEEHKCGEVKSARSSLERFKCIPNKWVCDGEFDCEDKSDEFQCKNVSCQEKQFQCEE 131
Query: 213 ---GMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDE 267
CIPE+W CDG DC +G DE N + +C + QC+ + CI NW+CD
Sbjct: 132 LSGDYSLCIPETWVCDGQRDCT-NGKDEQNCTSKTSKCPDNNFQCS-NGNCIFKNWVCDG 189
Query: 268 EMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
E DCS +D+++ +QC G++ S +CIP W CD E+DC D++
Sbjct: 190 EEDCSDGSDELLTAPSNCNRTVNQCPPGEMWKCGSGECIPSRWRCDAEVDCK-----DHS 244
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DE H L E C +S+ C+ + CDG+ DCS+G DE + + +C
Sbjct: 245 DEKNCTAIQHTCKL--AEEFACKASHNCINKAFVCDGELDCSDGSDEDDCADVRTEC--- 299
Query: 386 KCSHKCSPTPRGA 398
K + P GA
Sbjct: 300 KSGERTCPASYGA 312
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 117/253 (46%), Gaps = 44/253 (17%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--------HQCFNGQVQCALSK----K 257
F C G+CIP SW+CDG +DC ++ DE N I H+C G+V+ A S K
Sbjct: 38 FQCQDGRCIPMSWRCDGDIDC-QNEEDEKNCPISEVCGAEEHKC--GEVKSARSSLERFK 94
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALS---KKCIPHNWLCDEE 313
CIP+ W+CD E DC D +DE K C Q QC LS CIP W+CD +
Sbjct: 95 CIPNKWVCDGEFDCE-----DKSDEFQCKNVSCQEKQFQCEELSGDYSLCIPETWVCDGQ 149
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC+ N K C N +C + N C+ + CDG+ DCS+G DE
Sbjct: 150 RDCTNGKDEQNCTSKTSK--------CPDNNFQCSNGN-CIFKNWVCDGEEDCSDGSDEL 200
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNT 432
+ C+ + P G M C +G+ P++ +C DA+ D S ++ C T
Sbjct: 201 LTAPS-------NCNRTVNQCPPGEMWKCGSGECIPSRWRC-DAEVDCKDHSDEKNC--T 250
Query: 433 HLSYVCSCTEGYT 445
+ + C E +
Sbjct: 251 AIQHTCKLAEEFA 263
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 90 LLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKN-IQWPSSLVI 134
+L S DL P +D R+E++GM G++R+ +V + + WP+ L +
Sbjct: 607 VLYSSDLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRTVIVEGDRVVWPNGLAL 666
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
DY +YW D+ + ++ S G + + H ++
Sbjct: 667 DYVDKRVYWADAKIKSIFSCDYWGKNIKTVLHSHQY 702
>gi|195153014|ref|XP_002017427.1| GL22298 [Drosophila persimilis]
gi|194112484|gb|EDW34527.1| GL22298 [Drosophila persimilis]
Length = 1070
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 151/374 (40%), Gaps = 79/374 (21%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + +C S C+ LS CD DC + CNA C +F+C G CI WK
Sbjct: 317 CSPEQFQCKSGEGVCIPLSWMCDQNKDCDDAAMSQ--CNATCRSDEFTCASGDCIQSRWK 374
Query: 224 CDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC+ DGSDE N +C C + CI W+CD + DC D++DE
Sbjct: 375 CDGDHDCV-DGSDELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDE 427
Query: 283 DWD-------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ C + C C+ W+CD ++DC D D D
Sbjct: 428 KQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGD-------DEDPANCQ 480
Query: 336 NAVLCHPNELRCGSSN-------------------------------------------- 351
N V C P++ +CG +
Sbjct: 481 N-VTCRPDQFQCGDRSCIAGHLNCNGEKDCADGQRREGLRPGHTPQGSATPPPSSTAVGG 539
Query: 352 QCVALSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--N 407
QC+AL K C+ + DC +GEDE G N+ +N C H+C G C C G +
Sbjct: 540 QCIALDKVCNKRKDCPDGEDEPAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLS 599
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASI 466
+K CVD DEC G+C Q C N + C C GY P + C A + AS+
Sbjct: 600 GDKRTCVDIDECENPGTCSQLCINEIGGFKCECEAGYMRDPRNHTRCKA----GEGHASL 655
Query: 467 IFSSTVDIRRIHLN 480
+ + DIR+I L+
Sbjct: 656 LLARRHDIRKIALD 669
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 98/215 (45%), Gaps = 26/215 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + +C +S C+A+ CDG DC + DE F + C QF CG G CIP
Sbjct: 193 YCEEKQFQC-ASGACIAIRFVCDGDSDCPDHSDERLEQCKFRESTCNADQFRCGNGNCIP 251
Query: 220 ESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ W CD DC DGSDE + CI C +V C ++CIP WLCD + DC D
Sbjct: 252 QKWVCDHEADCT-DGSDELSLLCISMCQPYEVMCKNMEQCIPRGWLCDGDFDCR-----D 305
Query: 279 NTDEDWDKFHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE C Q QC + CIP +W+CD+ DC D S
Sbjct: 306 MSDEQDCTRKTCSPEQFQCKSGEGVCIPLSWMCDQNKDCD------------DAAMSQCN 353
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E C S + C+ CDG DC +G DE
Sbjct: 354 ATCRSDEFTCASGD-CIQSRWKCDGDHDCVDGSDE 387
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 137/349 (39%), Gaps = 70/349 (20%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPES 221
+C P E+ C + QC+ CDG DC + DE C+P QF C G G CIP S
Sbjct: 276 MCQPYEVMCKNMEQCIPRGWLCDGDFDCRDMSDEQDCTRKTCSPEQFQCKSGEGVCIPLS 335
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC + + C C + + CA S CI W CD + DC VD +D
Sbjct: 336 WMCDQNKDCDDAAMSQ---CNATCRSDEFTCA-SGDCIQSRWKCDGDHDC-----VDGSD 386
Query: 282 E-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
E + +C C + CI W+CD + DC D++DE + +
Sbjct: 387 ELNCPAKGKCQEEAFTCD-NGDCISKRWVCDGDYDCK-----DHSDEKQNCSIDPGLLRG 440
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----------------------- 375
C P+E C C+ + CDG DC G+DE P
Sbjct: 441 FCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPANCQNVTCRPDQFQCGDRSCIAGH 500
Query: 376 --CNNKADC------ENLKCSH----KCSPTPR----GAMCF-----------CPAGQNP 408
CN + DC E L+ H +P P G C CP G++
Sbjct: 501 LNCNGEKDCADGQRREGLRPGHTPQGSATPPPSSTAVGGQCIALDKVCNKRKDCPDGEDE 560
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+C + +G C C + + Y C C +GY L D ++C ++
Sbjct: 561 PAGKCGVNECASKNGGCMHQCIDQVVGYKCECRKGYKLSGDKRTCVDID 609
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 792 RIERAGMDGSHRTTIISYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 851
Query: 167 PNEL 170
E
Sbjct: 852 STEY 855
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 6/136 (4%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
Y C H + ++ +D C P+E C C+ + CDG DC G+DE P
Sbjct: 419 YDCKDHSDEKQNCSIDPGLLRGFCQPHEFSCKDRITCLHSTWVCDGDIDCPGGDDEDPAN 478
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLE----DGSDEPNTCIHQCFNGQVQCALS 255
N C P QF CG CI C+G DC + +G +T A+
Sbjct: 479 CQNVTCRPDQFQCGDRSCIAGHLNCNGEKDCADGQRREGLRPGHTPQGSATPPPSSTAVG 538
Query: 256 KKCIPHNWLCDEEMDC 271
+CI + +C++ DC
Sbjct: 539 GQCIALDKVCNKRKDC 554
>gi|340713782|ref|XP_003395415.1| PREDICTED: very low-density lipoprotein receptor-like [Bombus
terrestris]
Length = 604
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 143/497 (28%), Positives = 196/497 (39%), Gaps = 94/497 (18%)
Query: 9 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQS 68
Q QC + KCIP W+CD S DD DN+DE T E H+
Sbjct: 39 QFQCT-NGKCIPIPWVCD-----SMDDCGDNSDE--------------TSKCEGQHK--- 75
Query: 69 LCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV--TKNI 126
+ +C + +W E G + P V TKN
Sbjct: 76 --------CTDSEFKCTNGKCIPGTWHCDG----------EDDCYDGSDEDPTVCRTKNC 117
Query: 127 QWPSSLVIDYNQD---ILYWCDSHLNTVESVRVDGSHNAV---LCHPNELRCGSSNQCVA 180
N + + + CD HL+ DGS A C +E C ++ +C+
Sbjct: 118 TADQFTCHSGNGECVALAWMCDGHLDCS-----DGSDEAECNDTCRSDEFTC-ANKRCIQ 171
Query: 181 LSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
+ CD DC +G DE C P +F+C CI W+CDG DC D DE
Sbjct: 172 RTWVCDSDDDCEDGSDEEDCKPVTCGPSEFACSKNYCITSRWRCDGDFDC-PDKIDEVG- 229
Query: 241 CIHQCFNGQVQCALSK----------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ- 289
C + NG+ +K CI +W+CD E DC + DE + H
Sbjct: 230 CKYS--NGERPSHCNKDEDFDCDDDFTCIHKSWVCDGERDCP-----NGADELPKRCHNV 282
Query: 290 -CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C Q QC + CI + C+ + +C VD +DE + + +C P+
Sbjct: 283 TCRPDQFQCGDHRNCISGHLYCNGKAEC-----VDGSDE---RNCTGETTVCDPSTQFEC 334
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEG-PFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
S C+ LS C+ DC EDE C N+ N CS C P G C C AG
Sbjct: 335 SEGSCIPLSSVCNKNRDCIGWEDENEELCGVNECSKNNGGCSQICIDLPIGFRCDCNAGY 394
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEP 463
N+T C D DECL G C Q C N S+ C C GY P + C A +
Sbjct: 395 RLIDNRT-CDDIDECLEPGRCSQFCLNEKSSFKCICAPGYFKDPRNHTRCKAA----EGH 449
Query: 464 ASIIFSSTVDIRRIHLN 480
AS++F+ DIR++ L+
Sbjct: 450 ASLLFTRRHDIRKVALD 466
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 84/176 (47%), Gaps = 24/176 (13%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCI 259
N C QF C GKCIP W CD DC D SDE + C H+C + + +C + KCI
Sbjct: 32 NKPCPLRQFQCTNGKCIPIPWVCDSMDDC-GDNSDETSKCEGQHKCTDSEFKCT-NGKCI 89
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 316
P W CD E DC D +DED + C Q C + + +C+ W+CD +DC
Sbjct: 90 PGTWHCDGEDDC-----YDGSDEDPTVCRTKNCTADQFTCHSGNGECVALAWMCDGHLDC 144
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S D +DE + C +E C ++ +C+ + CD DC +G DE
Sbjct: 145 S-----DGSDE------AECNDTCRSDEFTC-ANKRCIQRTWVCDSDDDCEDGSDE 188
>gi|45383257|ref|NP_989783.1| low density lipoprotein receptor precursor [Gallus gallus]
gi|31455368|emb|CAD56163.1| low-density lipoprotein receptor precursor [Gallus gallus]
Length = 891
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 156/429 (36%), Gaps = 138/429 (32%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPGQFSCGMG----KCI 218
C P + RCG C++ + CDG +C +G DE P C + +C F CG +C+
Sbjct: 21 CDPEQFRCGDGG-CISATWVCDGGTECRDGSDEEPEMCRSLQCPAQHFDCGDAVGRERCV 79
Query: 219 PESWKCDGFVDCLEDGSDE----------------PNTCIHQCF--NGQVQCALSKK--- 257
P SW+CDG DC G+DE +C+ + F +G C
Sbjct: 80 PLSWRCDGHRDC-RHGADEWGCEPPPCASDQQRCSDGSCVSRAFLCDGDRDCPDGGDERD 138
Query: 258 ------------------CIPHNWLCDEEMDCSTDDIVDNTDEDWD-------------- 285
C+ WLCD + DC+ D DE
Sbjct: 139 CPPPPPCPPASFRCPDGVCVDPAWLCDGDADCA-----DGADERSPTCAEATAAEAEAAE 193
Query: 286 ------------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+C +V C S C+P W CD DCS D +DED
Sbjct: 194 AEAEEGEGVVPRPAQRCPPLRVPC-RSGGCVPRGWRCDGSPDCS-----DGSDED----- 242
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--------- 374
+ LC P E RC +CV + CDG DC++G DE GP
Sbjct: 243 GCDPPLCPPEEFRCADDGRCVWGGRRCDGHRDCADGSDEDGCDNAPSCVGPDVFQCRSGE 302
Query: 375 ------FCNNKADCENLK------------------CSHKCSPTPRGAMCFCPAG--QNP 408
C+ + C + CSH C P G C CP G
Sbjct: 303 CIPTERLCDGRRHCRDWSDEPLQHCDVDECSQGTSGCSHGCQDRPIGFRCLCPDGFRLGA 362
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
+ C D DEC C Q C N ++ C+C EGY P G+SC A+ P E ++
Sbjct: 363 DGKTCEDVDECAEAERCAQLCINLQGAFKCACAEGYAAEPGGRSCRAL-APVSE---LLL 418
Query: 469 SSTVDIRRI 477
S +RR+
Sbjct: 419 WSRRTLRRV 427
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPES 221
LC P E RC +CV + CDG DC++G DE NA P F C G+CIP
Sbjct: 248 LCPPEEFRCADDGRCVWGGRRCDGHRDCADGSDEDGCDNAPSCVGPDVFQCRSGECIPTE 307
Query: 222 WKCDGFVDCLEDGSDEP 238
CDG C D SDEP
Sbjct: 308 RLCDGRRHC-RDWSDEP 323
>gi|91094565|ref|XP_967627.1| PREDICTED: similar to low-density lipoprotein receptor (ldl), partial
[Tribolium castaneum]
Length = 1731
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 153/341 (44%), Gaps = 44/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT------PGQFSC------ 212
C + C + N CV CDG DC + DE EC +F+C
Sbjct: 720 CFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDEDS--RHECNDRKCDEQTEFTCEANKAW 776
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN------GQVQCALSKKCIPHNWLCD 266
G +CIP W CDG DC+ DG+DE N+ IH C Q CA + +CI WLCD
Sbjct: 777 GRAQCIPRKWLCDGDPDCV-DGADE-NSTIHHCATPQPCSEDQFTCA-NGRCINKGWLCD 833
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC D D E K+ C + C + KCI + + CD E DC D++D
Sbjct: 834 HDNDCG--DGTDEGKECNSKYKTCSAKEFTCQ-NFKCIRNQYRCDGEDDCG-----DHSD 885
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E K N +P++ RC + + C+ C+ DC++ DE CN A E
Sbjct: 886 EVGCK--KENNTCANPSQFRCNNGD-CIDGHLVCNKVSDCADDSDEPLHCNVDECAKVEI 942
Query: 385 LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCT 441
+C HKC T G C C AG + C D DEC+ G C Q C+NT S+ C C
Sbjct: 943 HQCGHKCVDTLTGYYCECNAGYKLLQDGKACADIDECVETPGVCSQYCSNTPGSFYCKCN 1002
Query: 442 EGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
E Y R PD +C + + IIF++ IR + ++
Sbjct: 1003 EQYYEREPDEHTCKRKDTVE---PWIIFTNKYYIRNMSIDA 1040
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E+A + G+NR LV+ I +P S+ + D +YW D L N +
Sbjct: 384 VREKIERADLDGQNREVLVSATI-YPFSITV--YGDYIYWTDLQLRGVYRAEKHTGNNMI 440
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQC----VALSKFCDGKP---------DCSNGEDE 197
E V R++ S + + + S N C +K C P D + +E
Sbjct: 441 EMVKRLEDSPRDIQVYTTTRQACSVNPCNINNGGCAKSCHPGPNATAECRCDDSTKLVNE 500
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++ N C H C + +CA
Sbjct: 501 GRMCVAKNLTCDTSKFYCANGRCISRMWACDGEDDCGDNSDEDTNYCSFHSCSPNEFRCA 560
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE ++ C G+ CA + +CIP + +C+
Sbjct: 561 -NGRCIFKSWKCDHENDCK-----DGSDEKDCQYPPCAVGEFTCA-NHRCIPMSQVCNGV 613
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C N L+C +N CV CDG DC + DE
Sbjct: 614 NDCKDNVTSDETHERCPQ-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 668
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 669 PLHCAQRTCPQNSFRCPNHRCIPA 692
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 171 RCGSSN--QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGMGKCIPESWKCDGF 227
RC N +C+ FCDGK DC + DE P +C P F C +C+P WKCD
Sbjct: 1512 RCPGRNNYRCIPKWLFCDGKDDCRDKSDELPENCPQCNPATDFKCANNRCVPNQWKCDFS 1571
Query: 228 VDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC ++ + + C +C + +CA + KCI W CD E DC DN+DE
Sbjct: 1572 DDCGDNSDESDDLCKGTYRECSESEFKCA-NGKCISSRWRCDHEDDCG-----DNSDETS 1625
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ QC NG QCA S CI + CD + DC D +DE C +
Sbjct: 1626 CREFQCKNGTFQCA-SGHCIASYFRCDGDRDCR-----DMSDEKNCPPRYPGGRYCPESR 1679
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK----CSHKCSP 393
+C +++ C++ + CDG DC +G DE P +C+ L+ +HKC P
Sbjct: 1680 FQC-NNHLCISQADLCDGADDCGDGSDEAPSLCTNFNCDTLRRFQCANHKCIP 1731
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 143/366 (39%), Gaps = 78/366 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPE 220
C N L+C +N CV CDG DC + DE P A+ C F C +CIP
Sbjct: 633 TTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQNSFRCPNHRCIPA 692
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+W CDG DC + + P C + CF C + C+P ++CD + DC +
Sbjct: 693 TWYCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCD-NGNCVPRIYICDGDNDC-----L 746
Query: 278 DNTDEDWDKFHQC----------FNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTD 326
DN+DED H+C F + A + +CIP WLCD + DC VD D
Sbjct: 747 DNSDED--SRHECNDRKCDEQTEFTCEANKAWGRAQCIPRKWLCDGDPDC-----VDGAD 799
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD----- 381
E+ + C ++ C ++ +C+ CD DC +G DEG CN+K
Sbjct: 800 ENSTIHHCATPQPCSEDQFTC-ANGRCINKGWLCDHDNDCGDGTDEGKECNSKYKTCSAK 858
Query: 382 ---CENLKC----------------SHKCSPTPRGAMCFCPAGQNPNKTQCVDA------ 416
C+N KC S + C P+ N C+D
Sbjct: 859 EFTCQNFKCIRNQYRCDGEDDCGDHSDEVGCKKENNTCANPSQFRCNNGDCIDGHLVCNK 918
Query: 417 ----------------DEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
DEC + C C +T Y C C GY L DGK+C ++
Sbjct: 919 VSDCADDSDEPLHCNVDECAKVEIHQCGHKCVDTLTGYYCECNAGYKLLQDGKACADIDE 978
Query: 459 PQDEPA 464
+ P
Sbjct: 979 CVETPG 984
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPG-QFSCGMGKCIPESWKCD 225
E +C S+ +C+ S CDG PDC +G DE P CN EC P QFSC G+CIP+ W CD
Sbjct: 1426 EFKCRSNGRCILDSWKCDGDPDCKDGSDEDPSICNKRECDPATQFSCKNGRCIPKLWVCD 1485
Query: 226 GFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSK--KCIPHNWLCDEEMDCSTDDIVDNTD 281
DC +D SDEP Q C G +C +CIP CD + DC D +D
Sbjct: 1486 FDNDCGDD-SDEPAYMCRQKNCTTGWQRCPGRNNYRCIPKWLFCDGKDDCR-----DKSD 1539
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + QC + +C+P+ W CD DC DN+DE D C
Sbjct: 1540 ELPENCPQCNPATDFKCANNRCVPNQWKCDFSDDCG-----DNSDES-DDLCKGTYRECS 1593
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E +C ++ +C++ CD + DC + DE
Sbjct: 1594 ESEFKC-ANGKCISSRWRCDHEDDCGDNSDE 1623
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 26/284 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C +CIP S C
Sbjct: 552 CSPNEFRC-ANGRCIFKSWKCDHENDCKDGSDEKDCQYPPCAVGEFTCANHRCIPMSQVC 610
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + Q C ++C + C+ WLCD + DC DN+
Sbjct: 611 NGVNDCKDNVTSDETHERCPQNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 665
Query: 281 DEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ Q C +C + +CIP W CD + + ++ +Y
Sbjct: 666 DENPLHCAQRTCPQNSFRCP-NHRCIPATWYCDGDD------DCGDGADEPPEYCKSEGR 718
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C + C + N CV CDG DC + DE +++ +C + KC + T
Sbjct: 719 TCFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDE----DSRHECNDRKCDEQTEFTCEAN 773
Query: 399 MCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
+ A P K C D D +DG+ D+ T H + C+E
Sbjct: 774 KAWGRAQCIPRKWLC-DGDPDCVDGA-DENSTIHHCATPQPCSE 815
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 122/319 (38%), Gaps = 73/319 (22%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D ++ D L+ M G+NR +V P + D +YW D +L +
Sbjct: 1190 DFFTDRLYWADAHLDYIAMSDLDGKNRH-IVISGSSVPHVFALSLFDDYIYWTDWNLKAI 1248
Query: 152 ESV-RVDGSHNAVL------------CHPNELR-------CGSSNQ-----CVALSKFCD 186
+ DG + +L HP LR CG++N C+
Sbjct: 1249 SRANKFDGKNLQILRNTTHKPYDIHVLHP--LRQLPYPNPCGTNNGGCSHLCLIAPPHIS 1306
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
+ GE+ C P QF G +DG TCI C
Sbjct: 1307 SYLNIEYGEEGATTYKCAC-PNQFYLG------------------KDGK----TCIANCT 1343
Query: 247 NGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCI 304
+GQ QC +KCIP W CD E DC D +DE QC G QC + C
Sbjct: 1344 SGQWQCKGHDEKCIPWFWQCDGERDCK-----DGSDEPSTCPPRQCRAGTFQCK-NGNCT 1397
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P + +CD TDD D +DE + C E +C S+ +C+ S CDG P
Sbjct: 1398 PSSTICD-----GTDDCGDGSDE------QQCDMPCPELEFKCRSNGRCILDSWKCDGDP 1446
Query: 365 DCSNGEDEGPFCNNKADCE 383
DC +G DE P NK +C+
Sbjct: 1447 DCKDGSDEDPSICNKRECD 1465
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L ID+ D LYW D+HL+ + +DG +
Sbjct: 1157 LQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDYIAMSDLDGKNR 1216
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
++ + S ALS F D
Sbjct: 1217 HIV-----ISGSSVPHVFALSLFDD 1236
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G P++T I P+ L ID N +YW DS L+T++ + +G + ++
Sbjct: 28 RIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVYWIDSKLDTIQKISYNGGNRQII 85
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C ++ +C++ CD + DC + DE +C G F C G CI ++C
Sbjct: 1592 CSESEFKC-ANGKCISSRWRCDHEDDCGDNSDETSCREFQCKNGTFQCASGHCIASYFRC 1650
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE N C + QC + CI LCD DC D D
Sbjct: 1651 DGDRDC-RDMSDEKNCPPRYPGGRYCPESRFQCN-NHLCISQADLCDGADDCG--DGSDE 1706
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIP 305
F+ + QCA + KCIP
Sbjct: 1707 APSLCTNFNCDTLRRFQCA-NHKCIP 1731
>gi|270016386|gb|EFA12832.1| hypothetical protein TcasGA2_TC004260 [Tribolium castaneum]
Length = 1751
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 154/341 (45%), Gaps = 44/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT------PGQFSC------ 212
C + C + N CV CDG DC + DE EC +F+C
Sbjct: 726 CFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDEDS--RHECNDRKCDEQTEFTCEANKAW 782
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN------GQVQCALSKKCIPHNWLCD 266
G +CIP W CDG DC+ DG+DE N+ IH C Q CA + +CI WLCD
Sbjct: 783 GRAQCIPRKWLCDGDPDCV-DGADE-NSTIHHCATPQPCSEDQFTCA-NGRCINKGWLCD 839
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC D D E K+ C + C + KCI + + CD E DC D++D
Sbjct: 840 HDNDCG--DGTDEGKECNSKYKTCSAKEFTCQ-NFKCIRNQYRCDGEDDCG-----DHSD 891
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCEN 384
E K N +P++ RC + + C+ C+ DC++ DE CN A E
Sbjct: 892 EVGCK--KENNTCANPSQFRCNNGD-CIDGHLVCNKVSDCADDSDEPLHCNVDECAKVEI 948
Query: 385 LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCT 441
+C HKC T G C C AG + C D DEC+ G C Q C+NT S+ C C
Sbjct: 949 HQCGHKCVDTLTGYYCECNAGYKLLQDGKACADIDECVETPGVCSQYCSNTPGSFYCKCN 1008
Query: 442 EGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
E Y R PD +C + EP IIF++ IR + ++
Sbjct: 1009 EQYYEREPDEHTCKRKDTV--EPW-IIFTNKYYIRNMSIDA 1046
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 144/324 (44%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL------------NTV 151
+ E++E+A + G+NR LV+ I +P S+ + D +YW D L N +
Sbjct: 390 VREKIERADLDGQNREVLVSATI-YPFSITV--YGDYIYWTDLQLRGVYRAEKHTGNNMI 446
Query: 152 ESV-RVDGSHNAVLCHPNELRCGSSNQC----VALSKFCDGKP---------DCSNGEDE 197
E V R++ S + + + S N C +K C P D + +E
Sbjct: 447 EMVKRLEDSPRDIQVYTTTRQACSVNPCNINNGGCAKSCHPGPNATAECRCDDSTKLVNE 506
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++ N C H C + +CA
Sbjct: 507 GRMCVAKNLTCDTSKFYCANGRCISRMWACDGEDDCGDNSDEDTNYCSFHSCSPNEFRCA 566
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE ++ C G+ CA + +CIP + +C+
Sbjct: 567 -NGRCIFKSWKCDHENDCK-----DGSDEKDCQYPPCAVGEFTCA-NHRCIPMSQVCNGV 619
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E + C N L+C +N CV CDG DC + DE
Sbjct: 620 NDCKDNVTSDETHERCPQ-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEN 674
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 675 PLHCAQRTCPQNSFRCPNHRCIPA 698
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 23/233 (9%)
Query: 171 RCGSSN--QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGMGKCIPESWKCDGF 227
RC N +C+ FCDGK DC + DE P +C P F C +C+P WKCD
Sbjct: 1518 RCPGRNNYRCIPKWLFCDGKDDCRDKSDELPENCPQCNPATDFKCANNRCVPNQWKCDFS 1577
Query: 228 VDCLEDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC ++ + + C +C + +CA + KCI W CD E DC DN+DE
Sbjct: 1578 DDCGDNSDESDDLCKGTYRECSESEFKCA-NGKCISSRWRCDHEDDCG-----DNSDETS 1631
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ QC NG QCA S CI + CD + DC D +DE C +
Sbjct: 1632 CREFQCKNGTFQCA-SGHCIASYFRCDGDRDCR-----DMSDEKNCPPRYPGGRYCPESR 1685
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK----CSHKCSP 393
+C +++ C++ + CDG DC +G DE P +C+ L+ +HKC P
Sbjct: 1686 FQC-NNHLCISQADLCDGADDCGDGSDEAPSLCTNFNCDTLRRFQCANHKCIP 1737
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 144/366 (39%), Gaps = 78/366 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPE 220
C N L+C +N CV CDG DC + DE P A+ C F C +CIP
Sbjct: 639 TTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDENPLHCAQRTCPQNSFRCPNHRCIPA 698
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+W CDG DC + + P C + CF C + C+P ++CD + DC +
Sbjct: 699 TWYCDGDDDCGDGADEPPEYCKSEGRTCFGDLFTCD-NGNCVPRIYICDGDNDC-----L 752
Query: 278 DNTDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTD 326
DN+DED H+C + + C +K +CIP WLCD + DC VD D
Sbjct: 753 DNSDED--SRHECNDRKCDEQTEFTCEANKAWGRAQCIPRKWLCDGDPDC-----VDGAD 805
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD----- 381
E+ + C ++ C ++ +C+ CD DC +G DEG CN+K
Sbjct: 806 ENSTIHHCATPQPCSEDQFTC-ANGRCINKGWLCDHDNDCGDGTDEGKECNSKYKTCSAK 864
Query: 382 ---CENLKC----------------SHKCSPTPRGAMCFCPAGQNPNKTQCVDA------ 416
C+N KC S + C P+ N C+D
Sbjct: 865 EFTCQNFKCIRNQYRCDGEDDCGDHSDEVGCKKENNTCANPSQFRCNNGDCIDGHLVCNK 924
Query: 417 ----------------DEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
DEC + C C +T Y C C GY L DGK+C ++
Sbjct: 925 VSDCADDSDEPLHCNVDECAKVEIHQCGHKCVDTLTGYYCECNAGYKLLQDGKACADIDE 984
Query: 459 PQDEPA 464
+ P
Sbjct: 985 CVETPG 990
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 103/211 (48%), Gaps = 20/211 (9%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA-ECTPG-QFSCGMGKCIPESWKCD 225
E +C S+ +C+ S CDG PDC +G DE P CN EC P QFSC G+CIP+ W CD
Sbjct: 1432 EFKCRSNGRCILDSWKCDGDPDCKDGSDEDPSICNKRECDPATQFSCKNGRCIPKLWVCD 1491
Query: 226 GFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSK--KCIPHNWLCDEEMDCSTDDIVDNTD 281
DC +D SDEP Q C G +C +CIP CD + DC D +D
Sbjct: 1492 FDNDCGDD-SDEPAYMCRQKNCTTGWQRCPGRNNYRCIPKWLFCDGKDDCR-----DKSD 1545
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E + QC + +C+P+ W CD DC DN+DE D C
Sbjct: 1546 ELPENCPQCNPATDFKCANNRCVPNQWKCDFSDDCG-----DNSDES-DDLCKGTYRECS 1599
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E +C ++ +C++ CD + DC + DE
Sbjct: 1600 ESEFKC-ANGKCISSRWRCDHEDDCGDNSDE 1629
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 26/284 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C +CIP S C
Sbjct: 558 CSPNEFRC-ANGRCIFKSWKCDHENDCKDGSDEKDCQYPPCAVGEFTCANHRCIPMSQVC 616
Query: 225 DGFVDCLED-GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + Q C ++C + C+ WLCD + DC DN+
Sbjct: 617 NGVNDCKDNVTSDETHERCPQNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 671
Query: 281 DEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE+ Q C +C + +CIP W CD + + ++ +Y
Sbjct: 672 DENPLHCAQRTCPQNSFRCP-NHRCIPATWYCDGDD------DCGDGADEPPEYCKSEGR 724
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C + C + N CV CDG DC + DE +++ +C + KC + T
Sbjct: 725 TCFGDLFTCDNGN-CVPRIYICDGDNDCLDNSDE----DSRHECNDRKCDEQTEFTCEAN 779
Query: 399 MCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
+ A P K C D D +DG+ D+ T H + C+E
Sbjct: 780 KAWGRAQCIPRKWLC-DGDPDCVDGA-DENSTIHHCATPQPCSE 821
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 122/319 (38%), Gaps = 73/319 (22%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D ++ D L+ M G+NR +V P + D +YW D +L +
Sbjct: 1196 DFFTDRLYWADAHLDYIAMSDLDGKNRH-IVISGSSVPHVFALSLFDDYIYWTDWNLKAI 1254
Query: 152 ESV-RVDGSHNAVL------------CHPNELR-------CGSSNQ-----CVALSKFCD 186
+ DG + +L HP LR CG++N C+
Sbjct: 1255 SRANKFDGKNLQILRNTTHKPYDIHVLHP--LRQLPYPNPCGTNNGGCSHLCLIAPPHIS 1312
Query: 187 GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
+ GE+ C P QF G +DG TCI C
Sbjct: 1313 SYLNIEYGEEGATTYKCAC-PNQFYLG------------------KDGK----TCIANCT 1349
Query: 247 NGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCI 304
+GQ QC +KCIP W CD E DC D +DE QC G QC + C
Sbjct: 1350 SGQWQCKGHDEKCIPWFWQCDGERDCK-----DGSDEPSTCPPRQCRAGTFQCK-NGNCT 1403
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P + +CD TDD D +DE + C E +C S+ +C+ S CDG P
Sbjct: 1404 PSSTICD-----GTDDCGDGSDE------QQCDMPCPELEFKCRSNGRCILDSWKCDGDP 1452
Query: 365 DCSNGEDEGPFCNNKADCE 383
DC +G DE P NK +C+
Sbjct: 1453 DCKDGSDEDPSICNKRECD 1471
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVT--KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++T +I WP++L ID+ D LYW D+HL+ + +DG +
Sbjct: 1163 LQAYIGKLGMDGSNFTTILTWEDDIAWPNALTIDFFTDRLYWADAHLDYIAMSDLDGKNR 1222
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
++ + S ALS F D
Sbjct: 1223 HIV-----ISGSSVPHVFALSLFDD 1242
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G P++T I P+ L ID N +YW DS L+T++ + +G + ++
Sbjct: 34 RIGKANLDGSGWMPVITSGISNPTDLTIDMNTHDVYWIDSKLDTIQKISYNGGNRQII 91
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 64/147 (43%), Gaps = 11/147 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C ++ +C++ CD + DC + DE +C G F C G CI ++C
Sbjct: 1598 CSESEFKC-ANGKCISSRWRCDHEDDCGDNSDETSCREFQCKNGTFQCASGHCIASYFRC 1656
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE N C + QC + CI LCD DC D D
Sbjct: 1657 DGDRDC-RDMSDEKNCPPRYPGGRYCPESRFQCN-NHLCISQADLCDGADDCG--DGSDE 1712
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPH 306
F+ + QCA + KCIP
Sbjct: 1713 APSLCTNFNCDTLRRFQCA-NHKCIPR 1738
>gi|321462894|gb|EFX73914.1| hypothetical protein DAPPUDRAFT_307561 [Daphnia pulex]
Length = 4592
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 163/384 (42%), Gaps = 82/384 (21%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGM- 214
GS V C ++ +C + CVA S CDG DC++G DE C N+ C QF+C
Sbjct: 794 GSCEHVTCRKDQFKCRTIG-CVARSWVCDGDRDCNDGSDEEESLCQNSSCNTNQFTCRQT 852
Query: 215 GKCIPESWKCDGFVDC-----------------------------------------LED 233
G+CIP++W+CD DC D
Sbjct: 853 GRCIPKAWECDSDHDCGAGDTSDEHDGCANQKCGVDEFTCASEMCVPLDFVCDRDDDCRD 912
Query: 234 GSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
GSDE N C H C + + CA KC+ LC+ ++CST + D ++ H C +
Sbjct: 913 GSDEKN-CQHMCESPEHYYCAADNKCLSAAALCNGVVECSTRE--DESNCSAVSKHGCES 969
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN--AVLCHPNELR---- 346
+ C CIP +C+ + DC +D +DE H V C P E
Sbjct: 970 HEYDCG-DGTCIPSLLVCNLQHDC-----LDGSDE-------HGCVNVTCRPGEFTPTCL 1016
Query: 347 -----CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
C + +C+ S C+GK DC++G DE C+ K CSH C P G +C
Sbjct: 1017 HPSRLCDNQTRCIDASLLCNGKADCTDGSDESDRCSEKLCSHAHDCSHVCHNAPEGVVCS 1076
Query: 402 CPAGQ-----NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CP N +KT C + C G+C Q C + C+C GY +PDG +C +
Sbjct: 1077 CPLDSGLTLGNDSKT-CSISHPCEQWGTCSQLCIPVRSKHHCACFPGYEKQPDGFTCKST 1135
Query: 457 NVPQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ ++R I L+
Sbjct: 1136 D---PSTPYIIFSNRHELRGIDLH 1156
Score = 107 bits (268), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCT 441
C+ C H C P+ G +CFC G PN T CVDADEC ++GSCDQ CTN++ S+ C C
Sbjct: 4 CQGAGCQHGCKPSADGPLCFCKEGSQPNGTDCVDADECAVEGSCDQLCTNSNGSFSCDCV 63
Query: 442 EGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY + DG+ C A+N P++E AS++ +++D+R +HLNG+
Sbjct: 64 GGY--QKDGQRCHALNEPENELASLLLVTSIDVRHVHLNGT 102
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 150/344 (43%), Gaps = 49/344 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM-GKCIPESW 222
C P++ +C +S+ C+ CDG DC++G DE C C +F C G+CIP W
Sbjct: 2623 CRPDQFKCNNSD-CIPSMWRCDGTEDCTDGSDESGDCQTRVCGETEFRCNTTGRCIPSLW 2681
Query: 223 KCDGFVDCLEDGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNW-------- 263
CDG VDC EDGSDE P+ C + + +C ++++C+ +
Sbjct: 2682 VCDGDVDCSEDGSDENPSVGCSPNLSPDKSRPACHHNEFRC-INRRCVLKLFYCDGDDDC 2740
Query: 264 --LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
L DE C+ H C + QC ++KCI + CD DC
Sbjct: 2741 GDLSDEPPYCAHV-----------SKHHCAPNEFQCR-NRKCITRSKTCDGRDDCDDGSD 2788
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D + C + RC ++ CV + CDG+ DC + DE N +
Sbjct: 2789 EDVISCSMSSNTNTTKGECLAGQFRC-ANRLCVNSALLCDGRNDCGDFSDENKC--NVNE 2845
Query: 382 CENLK-CSHKCSPTPRGAMCFCPAGQNPNKTQ---CVDADECLIDGS-CDQTCTNTHLSY 436
CE + C+H C P G C C G N C D DEC + C Q C NT SY
Sbjct: 2846 CEPINPCAHTCVDKPVGFECQCNEGYKTNPKDPLLCADVDECALHPRPCSQICRNTIGSY 2905
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+CSCT+G+ + +G C +++FS+ IR +HL+
Sbjct: 2906 ICSCTDGFAIH-NGTGC---KTNSSIAPTVLFSNRYYIREVHLH 2945
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 140/356 (39%), Gaps = 55/356 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P +C +N+C+ CD DC +G DE C+ +F CG G+CI S +C
Sbjct: 3450 CEPTYFKC-ENNKCIPGRWRCDYDNDCGDGSDEKGCTPRNCSESEFRCGDGRCIRGSLRC 3508
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD-------------C 271
+G +C +D SDE C C G+ QCA K CI +W CD ++D C
Sbjct: 3509 NGEFNC-DDRSDEAG-CNTTCSEGEFQCANPKFCIQADWRCDGDVDCADGSDEFHCNTTC 3566
Query: 272 STDDIV--------------------DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWL 309
S DD D +DE D C G+ +C + CIP +
Sbjct: 3567 SPDDFACANGECTSLLWRCDGDNDCSDGSDEARDMCAHLGCPPGKFRCR-NFLCIPQTEV 3625
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD DC D +DE + LC P++ RC S C+ S CDG DC +G
Sbjct: 3626 CDNYKDCE-----DGSDE--EPAVCQAQGLCLPHQFRC-RSGHCINGSMACDGFNDCGDG 3677
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRG-AMCFCPAGQNPNKTQCVDADECLIDGSCDQ- 427
DE C + + C KCS C G C C G T CL DG Q
Sbjct: 3678 SDEID-CRSPSVCSFGKCSQLCVEKKGGNHSCICAPGFAAMSTGANKPKTCLADGDASQL 3736
Query: 428 -TCTNTHLSYVCSCTEG----YTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIH 478
++ L + G P A +V + I+F S+ + IH
Sbjct: 3737 LIASDNKLRRLSPFKAGDISDSVFSPGSIRIEAADVFYNATELIVFWSSPHNKSIH 3792
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 138/334 (41%), Gaps = 57/334 (17%)
Query: 100 EIFPLDER---LEKAGMHGENRSPLVTK----NIQWPSSLVIDYNQDILYWCDSHLNTVE 152
E+F D R + A + G N ++++ N + + +D +YW D +VE
Sbjct: 3105 EVFWADAREDYIAVADLEGRNPRIVLSRGDNTNARLHHIFALTVFEDSIYWTDWETKSVE 3164
Query: 153 S-------------VRVDGSHNAVLCHPNELR------CGSSNQCVALSKFCDGK----- 188
+ + + HP R C ++ C AL G
Sbjct: 3165 KCHKYNGGDRETIITTIHRPMDIQVYHPLRQRPLEKNPCQNNGNCTALCLLKPGGGSQCA 3224
Query: 189 -PDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTC-IHQC 245
P+ +G C C+ QF C KCIP WKCD DC D SDEP C C
Sbjct: 3225 CPENFVLASDGVSCLNNCSSSQFVCATTYKCIPFWWKCDTQDDC-GDRSDEPADCPAFTC 3283
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC----ALSK 301
GQ QC+ + CI + LC+ E DC D +DE + H C + Q +C LS
Sbjct: 3284 MPGQFQCS-NGHCIHPSLLCNGESDCG-----DGSDEIKCETHTCLSSQFKCRGNGTLSD 3337
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI N CD++ DC + D D V C N+ RCG+ ++C+ CD
Sbjct: 3338 RCIDSNQRCDDQADCPLGE--DEKD--------CPPVTCPSNQHRCGTDSKCIPAVWVCD 3387
Query: 362 GKPDCSNGEDEGPFCNNKADCEN-LKC-SHKCSP 393
DC +G DE C +A +N +C S +C P
Sbjct: 3388 ADHDCPDGSDEPANCTQRACPDNHFRCRSGRCIP 3421
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 171/482 (35%), Gaps = 147/482 (30%)
Query: 107 RLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG------ 158
R+E+ + G NR + ++N+ P L + + LYW + ++ + ++
Sbjct: 625 RIERINLDGTNRELIASASENLHRPYGLAL--SDSFLYWTEKDAGKIQRLSLNNLSLPIE 682
Query: 159 ---SHNAVL----CHPNELRCGSSNQCVALSKFCDGKPD------------CSNGEDEGP 199
+ N VL N + G + ++ S C PD C G P
Sbjct: 683 TLRTENRVLFDIKLFDNTSQTGQTTLNISFSNPC---PDLCVVVPKGHVCLCREGFQSDP 739
Query: 200 FCNAECT----------PGQ-FSCGM-GKCIPESWKCDGFVDCLEDGSDE----PNTCIH 243
N CT P Q F C G CI + + CDG DC D SDE +C H
Sbjct: 740 KNNQSCTIPTAELTTCDPIQEFRCRRSGTCIEKRFLCDGDFDC-PDQSDEDTAPGGSCEH 798
Query: 244 -QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALS 300
C Q +C + C+ +W+CD + DC+ D +DE+ + C Q C +
Sbjct: 799 VTCRKDQFKCR-TIGCVARSWVCDGDRDCN-----DGSDEEESLCQNSSCNTNQFTCRQT 852
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-----FSHNAVLC--------------- 340
+CIP W CD + DC D D D ++ F+ + +C
Sbjct: 853 GRCIPKAWECDSDHDCGAGDTSDEHDGCANQKCGVDEFTCASEMCVPLDFVCDRDDDCRD 912
Query: 341 ------------HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------------- 373
P C + N+C++ + C+G +CS EDE
Sbjct: 913 GSDEKNCQHMCESPEHYYCAADNKCLSAAALCNGVVECSTREDESNCSAVSKHGCESHEY 972
Query: 374 -----------PFCNNKADCENLKCSH-----KCSPTPRGAMCFCPAGQNPNKTQCVDAD 417
CN + DC + H C P C P+ N+T+C+DA
Sbjct: 973 DCGDGTCIPSLLVCNLQHDCLDGSDEHGCVNVTCRPGEFTPTCLHPSRLCDNQTRCIDAS 1032
Query: 418 -------ECLIDGS----------------CDQTCTNTHLSYVCSCT--EGYTLRPDGKS 452
+C DGS C C N VCSC G TL D K+
Sbjct: 1033 LLCNGKADC-TDGSDESDRCSEKLCSHAHDCSHVCHNAPEGVVCSCPLDSGLTLGNDSKT 1091
Query: 453 CT 454
C+
Sbjct: 1092 CS 1093
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 128/316 (40%), Gaps = 54/316 (17%)
Query: 93 SWDLPAPEIFPLDERL---EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
+ DL A +++ D RL E+A + G+NR L + Q P + + N ++W D L+
Sbjct: 2258 ALDLVAQKLYWSDARLDKMERADLDGKNRVVLSKVSPQHPFDIAVYGN--YIFWTDWVLH 2315
Query: 150 TVESV-------------RVDGSHNAVLCHPNELRCGSSNQCVALSKFCD--------GK 188
V V V H C S+N C AL+ C+ GK
Sbjct: 2316 AVLRANKYTGEDVVWLRKEVPRPMGIVAVHNTTYDC-SANPCRALNGGCEDLCRLDEYGK 2374
Query: 189 PDC------SNGEDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
C + + C + C+ +F C G CIP + CDG +C + + P
Sbjct: 2375 VSCQCFPGRTVLRSDPSRCGRQSTNCSAMEFECSSGDCIPFHFTCDGVAECPDFSDELPT 2434
Query: 240 TCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
C+ +C G QC S +C+ N CD + DC D +DE C Q +C
Sbjct: 2435 YCMFRKCLPGFFQCQNS-RCVLQNASCDGQNDCG-----DFSDE---ANCTCSTSQFRCT 2485
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE--LRCGSSNQCVAL 356
S CI +++ CD + DC D +DE + + P + C ++ C+
Sbjct: 2486 -SGHCISNSFRCDTDPDCP-----DASDEMGCPQPNCTLTVNAPAQKLQNCRNTTACIHP 2539
Query: 357 SKFCDGKPDCSNGEDE 372
S CDG DC + DE
Sbjct: 2540 SWICDGANDCWDNSDE 2555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+++A M G + LV +N+ WP+ L IDY +YWCD HL +E + +DG++ ++
Sbjct: 583 IQRAWMDGTHIEVLVRQNLHWPNGLTIDYAGKKMYWCDVHLGRIERINLDGTNRELIASA 642
Query: 168 NE 169
+E
Sbjct: 643 SE 644
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 117/297 (39%), Gaps = 53/297 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+++A G + ++T +I+ P++L +D LYW D+ L+ +E +DG + VL
Sbjct: 2233 IQRAYYTGFDVQSIITTDIRMPNALALDLVAQKLYWSDARLDKMERADLDGKNRVVLSKV 2292
Query: 166 ---HPNELRCGSS---------NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
HP ++ + + + +K+ E P + C
Sbjct: 2293 SPQHPFDIAVYGNYIFWTDWVLHAVLRANKYTGEDVVWLRKEVPRPMGIVAVHNTTYDCS 2352
Query: 214 MGKCIPESWKCDGFVDCLEDGS-------------DEPNTCIHQ---CFNGQVQCALSKK 257
C + C+ E G +P+ C Q C + +C+ S
Sbjct: 2353 ANPCRALNGGCEDLCRLDEYGKVSCQCFPGRTVLRSDPSRCGRQSTNCSAMEFECS-SGD 2411
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDE--DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CIP ++ CD +C D +DE + F +C G QC S +C+ N CD + D
Sbjct: 2412 CIPFHFTCDGVAECP-----DFSDELPTYCMFRKCLPGFFQCQNS-RCVLQNASCDGQND 2465
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C D +DE C ++ RC +S C++ S CD PDC + DE
Sbjct: 2466 CG-----DFSDE--------ANCTCSTSQFRC-TSGHCISNSFRCDTDPDCPDASDE 2508
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGE 116
+ LEFNHRN+++C++ V V LRCA + DL SWDLP P +F L+ + A
Sbjct: 118 STTLEFNHRNRTVCWLYHL-VPMVVLRCALVADLTVSWDLPPPTMFSLNTVSQVA----- 171
Query: 117 NRSPLVTKNIQWPSS--LVIDYNQDILYWCDSHL---NTVESVRVDGSHNAVLCHPN 168
+ W S +D N+++++ C+S L TV V ++ L PN
Sbjct: 172 ---------LDWVSGNWYFLDDNKELIFLCNSTLTICTTVVEVNLNKPRALALDPPN 219
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+ + G +R LV ++I + + L +DY +YWCDS L+T+ES+ DG + VL
Sbjct: 1918 RIERVRLDGSDRRVLVNESIFFTTGLTLDYQNKKVYWCDSRLDTIESMDYDGGNRQVLLD 1977
Query: 167 PNEL 170
L
Sbjct: 1978 KTHL 1981
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ R+E A M G R LV +I +P+ L IDY LYW D T+ESV ++G V
Sbjct: 3891 LNARIETARMDGSLRRLLVDSDILYPTGLAIDYPARRLYWADPKTGTLESVNLEGKDRVV 3950
Query: 164 L 164
+
Sbjct: 3951 V 3951
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+AG+ G NR +V+ + +P L +D +YW D++L+ +E DG+ +
Sbjct: 233 RIERAGLDGSNRQSVVSDKVVYPVGLALDLANSYIYWIDTYLDVIERASYDGTKRETV 290
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 107 RLEKAGMHGENRSPLV----TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
R+E M G+ R +V + WP+ L +DY + +YW D+ +++ + + DG+
Sbjct: 1284 RIESCSMSGDGRKVVVRVDAVSDGAWPNGLTLDYGAERIYWIDARSDSIHTAKYDGT 1340
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
L + +Q P L +D+ LYWCD +T+E ++DG +L H
Sbjct: 2999 LHSATLQNPDGLAVDWVGRNLYWCDKKTDTIEVSKLDGRFRKILLH 3044
>gi|195177870|ref|XP_002028957.1| GL15420 [Drosophila persimilis]
gi|194108912|gb|EDW30955.1| GL15420 [Drosophila persimilis]
Length = 253
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS------KK 302
+C + CIP W CD DCS D++DE C GQ+ CA +
Sbjct: 11 HFRCKSTDFCIPIAWHCDGSNDCS-----DHSDE-----QDC--GQITCAQNFFKCNNTN 58
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-GSSNQCVALSKFCD 361
C+ ++CD + DC DN+DE + C + +C G S +CV ++ CD
Sbjct: 59 CVFKAYICDGKDDCG-----DNSDEGAEHACVPPPFKCPHGQWQCPGVSERCVNITSVCD 113
Query: 362 GKPDCSNGEDEGPFCNNKADCENL--KCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDAD 417
PDC NG DEG C+ A+CE+ +CS C TP GA+C CP G + C+D +
Sbjct: 114 DTPDCPNGADEGEGCD-LAECEHQTGQCSSFCQKTPNGALCVCPPGSEIGEDGFTCIDTN 172
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
EC G C Q CTNT SY CSC +GY L P+ +C AVN
Sbjct: 173 ECDPPGLCSQQCTNTKGSYFCSCQDGYVLEPNKHTCKAVN 212
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 7/108 (6%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
RC S++ C+ ++ CDG DCS+ DE C F C C+ +++ CDG D
Sbjct: 12 FRCKSTDFCIPIAWHCDGSNDCSDHSDEQDCGQITCAQNFFKCNNTNCVFKAYICDGKDD 71
Query: 230 CLEDGSDE--PNTCI---HQCFNGQVQC-ALSKKCIPHNWLCDEEMDC 271
C D SDE + C+ +C +GQ QC +S++C+ +CD+ DC
Sbjct: 72 C-GDNSDEGAEHACVPPPFKCPHGQWQCPGVSERCVNITSVCDDTPDC 118
>gi|28572061|ref|NP_788742.1| lipophorin receptor 2, isoform B [Drosophila melanogaster]
gi|28381467|gb|AAO41604.1| lipophorin receptor 2, isoform B [Drosophila melanogaster]
Length = 826
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 146/366 (39%), Gaps = 64/366 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
LC C + QC+ CDG DC +G DE N C +F+CG G+
Sbjct: 73 LCSSLMFMCKNGEQCIHREFMCDGDQDCRDGSDELECGNRTCRSDEFTCGNGRCIQNRFK 132
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTC-- 241
CIP W CDG DC +G DE C
Sbjct: 133 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 191
Query: 242 --IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
++ C G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 192 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 247
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 248 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGGG-LCIPNAKV 301
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 302 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 361
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 362 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 417
Query: 475 RRIHLN 480
R+I L+
Sbjct: 418 RKIALD 423
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 125/345 (36%), Gaps = 103/345 (29%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPH 261
+ C+ QF CG GKCIP W CD DC DGSDE + C C + C ++CI
Sbjct: 32 STCSQEQFRCGNGKCIPRRWVCDRENDC-ADGSDESTSQCRGLCSSLMFMCKNGEQCIHR 90
Query: 262 NWLCDEEMDCSTDDIVDNTDE--------DWDKFHQCFNGQ------------------- 294
++CD + DC D +DE D+F C NG+
Sbjct: 91 EFMCDGDQDCR-----DGSDELECGNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSD 144
Query: 295 -------VQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C S CIP+ W+CD + DC N +++ C
Sbjct: 145 EKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQ 198
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------------FC 376
E +C C+ S CDG+ DC +GEDE C
Sbjct: 199 AGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTC 258
Query: 377 NNKADCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPNKTQ 412
N K DC + C S TPR G +C CP G++ +
Sbjct: 259 NGKRDCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGK 318
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C + +G C C N + Y C C +GY L D +C ++
Sbjct: 319 CGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDID 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 546 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 605
Query: 167 PNEL 170
E
Sbjct: 606 SGEY 609
>gi|198417179|ref|XP_002121855.1| PREDICTED: similar to low density lipoprotein-related protein 2,
partial [Ciona intestinalis]
Length = 2009
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 116/373 (31%), Positives = 156/373 (41%), Gaps = 75/373 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGKCIPES 221
C N+ +C + QCV+LS +CDG DC +G DE C+ C G F+C G+CI
Sbjct: 697 CRSNQFQCDNVYQCVSLSWYCDGYNDCDDGSDEPSDCDHPDRTCPAGSFTCDNGRCIDLD 756
Query: 222 WKCDGFVDCL----------------------------------------------EDGS 235
W C+G DC EDG+
Sbjct: 757 WICNGNNDCSDNSDEDDRHDCDSRTCQSNEFTCAANPPGHSRCISNLFVCDGDPDCEDGA 816
Query: 236 DE--PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-CFN 292
DE P+ C + Q C+ + CIP ++CD + DC D +DE D +Q C
Sbjct: 817 DELLPSCPKPTCNSNQFNCS-NGLCIPKYFVCDHDNDCG-----DYSDEHTDCVYQTCRA 870
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q C + KCI W CD DC D +DED C P++ RC + Q
Sbjct: 871 YQFTCE-NGKCISTWWRCDGRDDCG-----DGSDED---GCPTGPPTCPPDQFRC-KNGQ 920
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFCPAGQN--PN 409
C+ CD PDC++ DE N+ A + +C+ C TP C C G P+
Sbjct: 921 CIDGGLVCDRNPDCTDRSDEERCGLNECATIASNQCAQLCVDTPTSYYCDCNKGYRLLPD 980
Query: 410 KTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
C D +EC+ C Q C NT SY C C GY DGK+C N D I+F
Sbjct: 981 GKACEDMNECIETPWVCSQLCDNTEGSYYCKCGGGYLREADGKTCRQ-NSGVD--PYIMF 1037
Query: 469 SSTVDIRRIHLNG 481
S+ IR+I +G
Sbjct: 1038 SNRYYIRKISTDG 1050
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 143/308 (46%), Gaps = 37/308 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ S C+ +C +G DE + C PG F C G C+P S +C
Sbjct: 1595 CSESEFRC-DNQQCIPQSWVCNQNDNCGDGSDEKGCTASTCLPGYFECTSGHCVPSSVQC 1653
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVD 278
DG DC+ D SDE +C+ + F G C ++ CI ++ CD DC D
Sbjct: 1654 DGDRDCM-DASDEA-SCVPR-FPGGRFCPTARFQCDNHVCINPSFRCDGHNDCG-----D 1705
Query: 279 NTDEDWDKFHQCFN--GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-YFSH 335
+DE + N G+ +C ++ CI +N CD DC D +DE + + +
Sbjct: 1706 ESDE-LPSVCESVNCTGRFRCLKTRICIYNNKKCDGNDDCK-----DGSDESVEMCHPTT 1759
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSP 393
A +C P E +C + +CV+ + CD DC + DE + C + C C+P
Sbjct: 1760 VAPMCKPGEYKC-FNGKCVSKNVICDSVDDCGDETDESGCHKGDTTHTCNDSPCEQTCTP 1818
Query: 394 ------TPRGAMCFCPAGQNPN---KTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEG 443
P +C C AG N ++ C+D +EC+ + +C Q C N S CSC +G
Sbjct: 1819 IPALDGVPGYYLCSCDAGFKINDDDRSSCLDVNECVENWATCSQICQNMKGSRQCSCDDG 1878
Query: 444 YTLRPDGK 451
Y L D +
Sbjct: 1879 YVLSGDSE 1886
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 106/391 (27%), Positives = 157/391 (40%), Gaps = 117/391 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--------------NAECTP--- 207
C+ N+ C S+ C +S CDG DCS+GEDE N C P
Sbjct: 617 CNTNQYTC-SNGICRPISWLCDGYSDCSDGEDESERSCADNTCESHRHRCPNGRCIPISF 675
Query: 208 ------------------------GQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
QF C + +C+ SW CDG+ DC +DGSDEP+ C
Sbjct: 676 VCDFDDDCGDGSDEQGCHGKTCRSNQFQCDNVYQCVSLSWYCDGYNDC-DDGSDEPSDCD 734
Query: 243 H---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF----HQCFNGQV 295
H C G C + +CI +W+C+ DCS DN+DED D+ C + +
Sbjct: 735 HPDRTCPAGSFTCD-NGRCIDLDWICNGNNDCS-----DNSDED-DRHDCDSRTCQSNEF 787
Query: 296 QCALS----KKCIPHNWLCDEEMDC--STDDIVDNTDEDW--DKYFSHNAVLCHPNELRC 347
CA + +CI + ++CD + DC D+++ + + F+ + LC P C
Sbjct: 788 TCAANPPGHSRCISNLFVCDGDPDCEDGADELLPSCPKPTCNSNQFNCSNGLCIPKYFVC 847
Query: 348 GSSN---------------------------QCVALSKFCDGKPDCSNGEDE-------G 373
N +C++ CDG+ DC +G DE
Sbjct: 848 DHDNDCGDYSDEHTDCVYQTCRAYQFTCENGKCISTWWRCDGRDDCGDGSDEDGCPTGPP 907
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC-------LIDGSCD 426
++ C+N +C G +C +NP+ T D + C + C
Sbjct: 908 TCPPDQFRCKNGQC------IDGGLVC----DRNPDCTDRSDEERCGLNECATIASNQCA 957
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
Q C +T SY C C +GY L PDGK+C +N
Sbjct: 958 QLCVDTPTSYYCDCNKGYRLLPDGKACEDMN 988
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 146/380 (38%), Gaps = 109/380 (28%)
Query: 103 PLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR------V 156
P ER+E++ M G +R L+ + + P +L + +YW D V V V
Sbjct: 481 PSKERVERSNMDGTDRE-LLIQGLDHPFALAV--LDQFIYWTDWSTRGVYRVEKQTGGYV 537
Query: 157 DGSHNAVLCHPNEL---------RCGSSNQCVAL----SKFCDGKPD------CSNGEDE 197
+ P ++ C N C L S C P+ C G+ +
Sbjct: 538 TKMRTQLPSTPMDVVAFSTRGQGECKGYNPCNRLNGGCSHICTVGPENTAECSCPTGDGK 597
Query: 198 GPFC------------NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP------N 239
+ C Q++C G C P SW CDG+ DC DG DE N
Sbjct: 598 KYYLANNNKDCIVDTGQDRCNTNQYTCSNGICRPISWLCDGYSDC-SDGEDESERSCADN 656
Query: 240 TC---IHQCFNG--------------------------------QVQCALSKKCIPHNWL 264
TC H+C NG Q QC +C+ +W
Sbjct: 657 TCESHRHRCPNGRCIPISFVCDFDDDCGDGSDEQGCHGKTCRSNQFQCDNVYQCVSLSWY 716
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
CD DC D +DE D H C G C + +CI +W+C+ DCS
Sbjct: 717 CDGYNDCD-----DGSDEPSDCDHPDRTCPAGSFTCD-NGRCIDLDWICNGNNDCS---- 766
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDE----- 372
DN+DED D++ ++ C NE C ++ ++C++ CDG PDC +G DE
Sbjct: 767 -DNSDED-DRH-DCDSRTCQSNEFTCAANPPGHSRCISNLFVCDGDPDCEDGADELLPSC 823
Query: 373 -GPFCN-NKADCENLKCSHK 390
P CN N+ +C N C K
Sbjct: 824 PKPTCNSNQFNCSNGLCIPK 843
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 94/201 (46%), Gaps = 22/201 (10%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
CV CDG DC +G DE + C QF C GKC+ +W C+G +C + +E
Sbjct: 1403 CVKPEYMCDGDNDCEDGSDEVNCDDYPCLDSQFKCNNGKCLSNTWLCNGIDECGDGSDEE 1462
Query: 238 PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD----IVDNTDEDWDKFHQCF- 291
C + C G QC + +CIP NW CD + DC V N+D+ H+C
Sbjct: 1463 EGMCSERTCPVGNFQCD-NGRCIPSNWWCDVDDDCGDGSDEPAAVCNSDQ-----HRCRP 1516
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
C + +CIP +C+ DD DN+DE + N V N+ RC +++
Sbjct: 1517 EIDFACHTTYRCIPMWAVCN-----GNDDCYDNSDEALCSETTCNPV----NDFRC-TNH 1566
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ L CDG DC + DE
Sbjct: 1567 RCIPLRWKCDGWNDCGDNSDE 1587
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 128/329 (38%), Gaps = 92/329 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT--VESVRVDGSHNAVLC 165
+E++ + G R+ ++ ++ WP+ + IDY +D LYW D+ + VE +DG+ +L
Sbjct: 441 IERSSLVGNGRTVIIGDDLLWPNGIAIDYGEDKLYWADAQPSKERVERSNMDGTDRELLI 500
Query: 166 ----HPNELRC----------------------------------GSSNQCVALSKFCDG 187
HP L + VA S G
Sbjct: 501 QGLDHPFALAVLDQFIYWTDWSTRGVYRVEKQTGGYVTKMRTQLPSTPMDVVAFSTRGQG 560
Query: 188 K-----------PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED-GS 235
+ CS+ GP AEC SC G + + + DC+ D G
Sbjct: 561 ECKGYNPCNRLNGGCSHICTVGPENTAEC-----SCPTGDG-KKYYLANNNKDCIVDTGQ 614
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD------IVDNTDEDWDKFHQ 289
D NT + C NG C P +WLCD DCS + DNT E H+
Sbjct: 615 DRCNTNQYTCSNG--------ICRPISWLCDGYSDCSDGEDESERSCADNTCE--SHRHR 664
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C NG +CIP +++CD + DC + C N+ +C +
Sbjct: 665 CPNG--------RCIPISFVCDFDDDCGDGSDEQGC----------HGKTCRSNQFQCDN 706
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
QCV+LS +CDG DC +G DE C++
Sbjct: 707 VYQCVSLSWYCDGYNDCDDGSDEPSDCDH 735
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
YF + + + R L ++ + + + I LL D + +
Sbjct: 75 YFLNKFTSETYIEVITSDRRYRLVLLKVVDDQPIAITVNPIKRLLYWAD------YGQNP 128
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A + G NR+ L T + P S+V+DY +YWCD+ +T+E + DGS +
Sbjct: 129 KIESAYLDGSNRTTLATSGVVQPRSIVVDYTNHDVYWCDAKSSTIEKMTWDGSVRTTI 186
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 48 FKRILNGTHTLALEFNHRN--------QSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
F R + LA+E+ R Q+L F+ + N +S R + D+ ++ P
Sbjct: 1099 FHREVPDGEGLAVEWVTRKLYWLDGSLQAL-FVSELNGTSKRTLMSGCIDVNRTYCFHTP 1157
Query: 100 EIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD 145
+ + + KA ++G + ++T I +PS+L +DY + +YW D
Sbjct: 1158 RALVVHPKRSLLLWSDAGVVPYIGKAYLNGGGPTAVITTGISFPSALTVDYVTERIYWGD 1217
Query: 146 SHLNTVESVRVDGSHNAVL 164
SH+++++ +DG++ L
Sbjct: 1218 SHIDSIQFSDMDGNNRHRL 1236
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 56/282 (19%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQ-WPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAV 163
+ ++ + M G NR L + Q +P + + + +YW D S + ++ +DGS +
Sbjct: 1221 DSIQFSDMDGNNRHRLYLQGQQFYPKPYALSFFESYIYWTDWSTYSMYKAHGLDGSDFQL 1280
Query: 164 LC------------HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
L HP SN C DCS+ C GQ
Sbjct: 1281 LVNTTHRPYDLHVVHPYRQDTRVSNPCAT------NNGDCSH------LCLLTIN-GQRE 1327
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C KC P++++ G + C C + Q +C S+KCIP W CD DC
Sbjct: 1328 C---KC-PDNFESVGI-------GINSHKCFPACTSAQYRCDTSEKCIPIYWKCDGVNDC 1376
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C G QC + C+ ++CD + DC D +DE
Sbjct: 1377 P-----DGSDEPDTCPPRYCDAGYFQC-VDYGCVKPEYMCDGDNDCE-----DGSDE--- 1422
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C ++ +C ++ +C++ + C+G +C +G DE
Sbjct: 1423 --VNCDDYPCLDSQFKC-NNGKCLSNTWLCNGIDECGDGSDE 1461
>gi|161078649|ref|NP_001097929.1| lipophorin receptor 2, isoform F [Drosophila melanogaster]
gi|33589593|gb|AAQ22563.1| GH26833p [Drosophila melanogaster]
gi|158030400|gb|ABW08769.1| lipophorin receptor 2, isoform F [Drosophila melanogaster]
Length = 861
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 144/366 (39%), Gaps = 64/366 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
LC C + QC+ CDG DC +G DE N C +F+CG G+
Sbjct: 73 LCSSLMFMCKNGEQCIHREFMCDGDQDCRDGSDELECGNRTCRSDEFTCGNGRCIQNRFK 132
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTCIH 243
CIP W CDG DC +G DE C
Sbjct: 133 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 191
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 192 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 247
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 248 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCGGG-LCIPNAKV 301
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 302 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 361
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 362 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 417
Query: 475 RRIHLN 480
R+I L+
Sbjct: 418 RKIALD 423
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 125/345 (36%), Gaps = 103/345 (29%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPH 261
+ C+ QF CG GKCIP W CD DC DGSDE + C C + C ++CI
Sbjct: 32 STCSQEQFRCGNGKCIPRRWVCDRENDC-ADGSDESTSQCRGLCSSLMFMCKNGEQCIHR 90
Query: 262 NWLCDEEMDCSTDDIVDNTDE--------DWDKFHQCFNGQ------------------- 294
++CD + DC D +DE D+F C NG+
Sbjct: 91 EFMCDGDQDCR-----DGSDELECGNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSD 144
Query: 295 -------VQCA------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+C S CIP+ W+CD + DC N +++ C
Sbjct: 145 EKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQ 198
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-------------------------FC 376
E +C C+ S CDG+ DC +GEDE C
Sbjct: 199 AGEFQCSDRITCLHKSWVCDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTC 258
Query: 377 NNKADCENLKCSHKC--SPTPR-----------GAMCF-----------CPAGQNPNKTQ 412
N K DC + C S TPR G +C CP G++ +
Sbjct: 259 NGKRDCADGSDEIMCDISATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGK 318
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C + +G C C N + Y C C +GY L D +C ++
Sbjct: 319 CGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVDID 363
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 546 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 605
Query: 167 PNEL 170
E
Sbjct: 606 SGEY 609
>gi|306755365|gb|ADN04911.1| lipophorin receptor protein [Spodoptera litura]
Length = 860
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 153/403 (37%), Gaps = 101/403 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---FCNAECTPGQFSCGMGKCIPES 221
C +E RC + +C+ LS CD + DC +G DE P C +F C G+CIP S
Sbjct: 42 CTQSEFRC-KTGRCIPLSWHCDNEKDCPDGSDEEPGTCTTQRRCPEHKFVCTTGQCIPIS 100
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL---------CDEEMDC- 271
WKCD DCL DGSDE + C C + + C + KCI W+ +E+ C
Sbjct: 101 WKCDDVADCL-DGSDE-HQCDETCRSDEFTCG-NGKCIQLRWVCDGDDDCGDDSDEVKCP 157
Query: 272 -------------------------STDDIVDNTDE-----DWDKFHQCFNGQVQCALSK 301
T+D D TDE C + + +C
Sbjct: 158 APTCHPQTRFSCGNGHCISAWWRCDGTEDCPDGTDEVGCTATPKVRSPCISSEFECKDRM 217
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG------------- 348
C+ W+CD + DC D DE D V C ++ +C
Sbjct: 218 TCVHKAWVCDGDRDCP-----DGGDE--DPQLCRGNVTCRLDQFQCKDHSCIPGALYCNG 270
Query: 349 ----------------------------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C+ LSK CD PDC N EDE +
Sbjct: 271 DKDCPDGSDELNCTVLKTVCGKKTEFDCGGGMCIPLSKVCDKHPDCPNFEDEPRDRCGEN 330
Query: 381 DCE--NLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+C N C+ +C TP G C C G + C D DEC G+C Q C N ++
Sbjct: 331 ECAKNNGGCTQRCVDTPVGYYCDCDKGYKLVDNRTCEDVDECSDPGACSQMCINEKGTFK 390
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C C GY P + T + P S++F+ DIR+I L+
Sbjct: 391 CECHAGYARDPRDR--TRCKATEGHP-SLLFARRFDIRKISLD 430
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 129/350 (36%), Gaps = 105/350 (30%)
Query: 200 FCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCAL 254
+ NAE CT +F C G+CIP SW CD DC + +EP TC Q C + C
Sbjct: 34 YKNAESRTCTQSEFRCKTGRCIPLSWHCDNEKDCPDGSDEEPGTCTTQRRCPEHKFVCT- 92
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-------DKFHQCFNG-------------- 293
+ +CIP +W CD+ DC +D +DE D+F C NG
Sbjct: 93 TGQCIPISWKCDDVADC-----LDGSDEHQCDETCRSDEF-TCGNGKCIQLRWVCDGDDD 146
Query: 294 ------QVQCAL------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+V+C + CI W CD DC D TDE
Sbjct: 147 CGDDSDEVKCPAPTCHPQTRFSCGNGHCISAWWRCDGTEDCP-----DGTDEVGCTATPK 201
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------- 374
C +E C CV + CDG DC +G DE P
Sbjct: 202 VRSPCISSEFECKDRMTCVHKAWVCDGDRDCPDGGDEDPQLCRGNVTCRLDQFQCKDHSC 261
Query: 375 -----FCNNKADCEN---------LK--CSHKCSPTPRGAMCF-----------CPAGQN 407
+CN DC + LK C K G MC CP ++
Sbjct: 262 IPGALYCNGDKDCPDGSDELNCTVLKTVCGKKTEFDCGGGMCIPLSKVCDKHPDCPNFED 321
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +C + + +G C Q C +T + Y C C +GY L D ++C V+
Sbjct: 322 EPRDRCGENECAKNNGGCTQRCVDTPVGYYCDCDKGYKLV-DNRTCEDVD 370
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 40/64 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +R +V+ +++WP+ L +D + +YW D+ +N + S +G+ V+ +
Sbjct: 553 KIERAGMDGSHRQTIVSYDVKWPNGLTLDLVRKRVYWVDAKMNMISSCNYNGTGRRVILY 612
Query: 167 PNEL 170
++
Sbjct: 613 STDV 616
>gi|344278682|ref|XP_003411122.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 1 [Loxodonta africana]
Length = 695
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 129/280 (46%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DC D SDE + C + C + CIP W
Sbjct: 41 ECEENQFRCRNERCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCD-NGHCIPERW 98
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D T+ +K C ++ C S KC+P +W CD E DC +
Sbjct: 99 KCDGEEECP--DGSDETEATCNK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCES---- 151
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +C CV K C+ + DC++G DE +C
Sbjct: 152 -GADE---AGCASSLGTCRGDEFQC-EDGACVPAIKRCNQEKDCADGSDEAGCLQGLNEC 206
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG + ++ C D DEC +C Q C N + C
Sbjct: 207 LHNNGGCSHICTDLKIGFECTCPAGFRLLDQKTCGDIDECEDPDACSQICVNYKGYFKCE 266
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 267 CHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 303
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + ++ L S DL P +D
Sbjct: 362 LHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLF-SQDLSEPRAISVDPLRGFM 420
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 421 YWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFN 480
Query: 158 GSHNAVL 164
G + +L
Sbjct: 481 GGNRKML 487
>gi|28461161|ref|NP_786938.1| low-density lipoprotein receptor precursor [Rattus norvegicus]
gi|547842|sp|P35952.1|LDLR_RAT RecName: Full=Low-density lipoprotein receptor; Short=LDL receptor;
Flags: Precursor
gi|56570|emb|CAA32001.1| unnamed protein product [Rattus norvegicus]
Length = 879
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 162/415 (39%), Gaps = 120/415 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+ CDG +C +G DE P + C G+FSCG + +CIP+
Sbjct: 27 CGKNEFQC-RDGKCIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE + C + +C KCI ++CD++ DC +D +
Sbjct: 86 SWRCDGRTDC-ENGSDELDCSPKTCSLDEFRCQ-DGKCISRQFVCDQDWDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALS---------------------------------------- 300
DE C +C S
Sbjct: 139 DEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEWPQNCGAEDTAAEVVSSPC 198
Query: 301 ---------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+CI +W+CD DC D +DE+ + C P+E +C +
Sbjct: 199 SSLEFHCGSSECIHRSWVCDGAADCK-----DKSDEE-----NCAVTTCRPDEFQC-ADG 247
Query: 352 QCVALSKFCDGKPDCSNGEDE----------GP---------------FCNNKADCE--- 383
C+ S+ CD + DC + DE GP CN+ DC
Sbjct: 248 SCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWS 307
Query: 384 ---------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQ 427
N CSH C G C CP+G + + QC D DEC +C Q
Sbjct: 308 DEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQEPDTCSQ 367
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C N S+ C C G+ + P + C AV ++F++ ++R++ L+ S
Sbjct: 368 LCVNLEGSFKCECRAGFHMDPHTRVCKAVG----SIGFLLFTNRHEVRKMTLDRS 418
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS++ I ++ + D+ S D I+ D DW + Y+ + GT ++A
Sbjct: 447 LSQRKI-YSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
R ++L + ++ + W PA +++K G++G + LVT
Sbjct: 506 VRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVT 557
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
++IQWP+ + +D LYW DS L+++ S+ V+G L HP L
Sbjct: 558 EDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSL 611
>gi|149020470|gb|EDL78275.1| low density lipoprotein receptor, isoform CRA_b [Rattus norvegicus]
Length = 803
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 162/415 (39%), Gaps = 120/415 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+ CDG +C +G DE P + C G+FSCG + +CIP+
Sbjct: 27 CGKNEFQC-RDGKCIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE + C + +C KCI ++CD++ DC +D +
Sbjct: 86 SWRCDGRTDC-ENGSDELDCSPKTCSLDEFRCQ-DGKCISRQFVCDQDWDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALS---------------------------------------- 300
DE C +C S
Sbjct: 139 DEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEWPQNCGGRDTAAEVVSSPC 198
Query: 301 ---------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+CI +W+CD DC D +DE+ + C P+E +C +
Sbjct: 199 SSLEFHCGSSECIHRSWVCDGAADCK-----DKSDEE-----NCAVTTCRPDEFQC-ADG 247
Query: 352 QCVALSKFCDGKPDCSNGEDE----------GP---------------FCNNKADCE--- 383
C+ S+ CD + DC + DE GP CN+ DC
Sbjct: 248 SCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWS 307
Query: 384 ---------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQ 427
N CSH C G C CP+G + + QC D DEC +C Q
Sbjct: 308 DEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQEPDTCSQ 367
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C N S+ C C G+ + P + C AV ++F++ ++R++ L+ S
Sbjct: 368 LCVNLEGSFKCECRAGFHMDPHTRVCKAVG----SIGFLLFTNRHEVRKMTLDRS 418
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS++ I ++ + D+ S D I+ D DW + Y+ + GT ++A
Sbjct: 447 LSQRKI-YSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
R ++L + ++ + W PA +++K G++G + LVT
Sbjct: 506 VRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVT 557
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
++IQWP+ + +D LYW DS L+++ S+ V+G L HP L
Sbjct: 558 EDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSL 611
>gi|347963036|ref|XP_311125.5| AGAP000037-PA [Anopheles gambiae str. PEST]
gi|333467390|gb|EAA06523.5| AGAP000037-PA [Anopheles gambiae str. PEST]
Length = 2062
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 151/347 (43%), Gaps = 55/347 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMG----- 215
C +E RC C++ S CDG+ DC + DE P C G+F C
Sbjct: 384 CTRDEFRC-KDGSCISASFQCDGETDCIDESDEANCDRPM--QSCPEGEFKCKGALGGMG 440
Query: 216 ----KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLC 265
+C+ ++CDG DC D SDE N C QV C +++ CIP W C
Sbjct: 441 GPGGRCVLMRFRCDGDNDC-GDWSDEEN-----CAKKQVDCMINEFKCDDGDCIPLQWRC 494
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
D++ DC+ + N D C + C +CI +W+CD DC +
Sbjct: 495 DDKQDCNNGEDEKNCPVDRIAGRTCSPDEYTCK-DGRCILRSWVCDGSADCRRGE----D 549
Query: 326 DEDWDKYFSHNAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEG--PF---CNN 378
++D D N LC P+ R + S+ C+ CDG DC+NGEDE P C
Sbjct: 550 EQDCDIKCELNQFLC-PSGSRNSTRDSSVCINQKHVCDGHTDCANGEDEMRCPIVHPCGA 608
Query: 379 KADCENLKCSHKCSPTPRGAM-CFCPAGQ--NPNKTQCVDADECLIDGS--CDQTCTNTH 433
+ CE L C G C C G + N C D DEC I + C Q C N
Sbjct: 609 HSRCEQL-----CITAYSGREECMCRPGYLLHGNGYNCTDIDECSITSNPVCSQECLNVA 663
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
S+ CSC GY LRPD ++C AV ++ ++ DIR++ L+
Sbjct: 664 GSFRCSCQPGYVLRPDQRTCKAVG----GSVKLLMANRADIRQVSLS 706
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
R+E+A M GENR L+T+ + WP+ L +D +YW D+ + T+ES + G
Sbjct: 1442 RIERADMDGENRVDLITEGLGWPNGLAVDRAAKRIYWADAQMKTIESCTLSGGARTKVVE 1501
Query: 164 -LCHPNEL 170
L HP L
Sbjct: 1502 NLPHPYAL 1509
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E+AGM G R LV++N+QWP+ L +D ++ LY+ D ++E V DG+
Sbjct: 1138 IERAGMDGTGRFTLVSENLQWPNGLALDVDKQRLYFLDGGTKSLEYVNYDGT 1189
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 82/186 (44%), Gaps = 31/186 (16%)
Query: 201 CNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ-------- 251
C+ +C P +F+C CI CDG DC+ ++ +HQ Q++
Sbjct: 249 CDIKCEPREFTCDKSCACIHMDLHCDGQADCVLTEDEQNCEIVHQRLAQQIKDNCETSGT 308
Query: 252 ---CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHN 307
CA + CI +WLCD + DC TDE H C + +C + CIP +
Sbjct: 309 HVICATTHTCISRDWLCDGDDDCGD-----YTDETHCGNRHDCTEEKFECQ-NGMCIPRD 362
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
W+CD + DC+ D +DE + C +E RC C++ S CDG+ DC
Sbjct: 363 WVCDGDNDCN-----DLSDE------KNCTKQCTRDEFRC-KDGSCISASFQCDGETDCI 410
Query: 368 NGEDEG 373
+ DE
Sbjct: 411 DESDEA 416
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
++E+A M G +R ++ + I WP+ L IDY +YW D+ + +ES DG
Sbjct: 828 KIERAFMDGSDRQTIIAEAIFWPNGLTIDYTSSRIYWADAK-HVIESANFDG 878
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 96/242 (39%), Gaps = 39/242 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------GPFCNAECTPGQF 210
+ C P E C S C+ + CDG+ DC EDE N E +
Sbjct: 251 IKCEPREFTCDKSCACIHMDLHCDGQADCVLTEDEQNCEIVHQRLAQQIKDNCETSGTHV 310
Query: 211 SCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
C CI W CDG DC + + H C + +C + CIP +W+CD +
Sbjct: 311 ICATTHTCISRDWLCDGDDDCGDYTDETHCGNRHDCTEEKFECQ-NGMCIPRDWVCDGDN 369
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-D 328
DC+ D +DE + QC + +C CI ++ CD E DC +D +DE +
Sbjct: 370 DCN-----DLSDEK-NCTKQCTRDEFRCK-DGSCISASFQCDGETDC-----IDESDEAN 417
Query: 329 WDKYFSHNAVLCHPNELRCG--------SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D+ C E +C +CV + CDG DC + DE +
Sbjct: 418 CDRPMQS----CPEGEFKCKGALGGMGGPGGRCVLMRFRCDGDNDCGDWSDEENCAKKQV 473
Query: 381 DC 382
DC
Sbjct: 474 DC 475
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G + +V N+ P+ L +D+ D +YW D N +E+ DG A+L
Sbjct: 1051 ISRAFINGSQQEAIVKANLISPAGLALDWVTDKIYWTDPGTNRIEAATTDGRQRALL 1107
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 4/100 (4%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+K + + H+ P G + P+ Q P+ T AD+ G C C
Sbjct: 916 SKVNGRGFRVVHEGLHFPMGIQSYHPSRQ-PDFTNRCAADKNGRKGGCSHLCLPARTHRR 974
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C+C G TLRPD K+C+ V D+ I V +R++
Sbjct: 975 CACPIGLTLRPDQKTCSTV---PDKLLLIARKKDVRVRQL 1011
>gi|392348185|ref|XP_003750040.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Rattus norvegicus]
Length = 899
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 154/399 (38%), Gaps = 94/399 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE CT F+C G CIPE WKC
Sbjct: 44 CEEDQFRC-RNERCIPSVWRCDEDNDCSDNSDEDDCPKRTCTDSDFTCDNGHCIPERWKC 102
Query: 225 DGFVDCLEDGSDEPN-TCI-HQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 103 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 161
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 162 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 221
Query: 309 LCDEEMDCSTDDIVDNTDEDWD------KYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+CD + DC D +DE + + + C P S +C+ L CDG
Sbjct: 222 VCDGQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTTQFTCRSGECIHLGWRCDG 276
Query: 363 KPDCSNGEDE-----GP------------------FCNNKADC----------------- 382
DC + DE GP CN + DC
Sbjct: 277 DRDCKDKSDEADCSPGPCRENDFQCGDGTCILAIKRCNQERDCLDGSDEAGCLQGLNECL 336
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 337 HNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFKCEC 396
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV S+IF++ ++RRI L
Sbjct: 397 HPGYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 432
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + VS R RC N DL P +D
Sbjct: 491 LHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNR-----DLSEPRAIAVDPL 545
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 546 RGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSS 605
Query: 154 VRVDGSHNAVL 164
+ +G + +L
Sbjct: 606 IDFNGGNRKML 616
>gi|149020469|gb|EDL78274.1| low density lipoprotein receptor, isoform CRA_a [Rattus norvegicus]
Length = 879
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 162/415 (39%), Gaps = 120/415 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+ CDG +C +G DE P + C G+FSCG + +CIP+
Sbjct: 27 CGKNEFQC-RDGKCIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE + C + +C KCI ++CD++ DC +D +
Sbjct: 86 SWRCDGRTDC-ENGSDELDCSPKTCSLDEFRCQ-DGKCISRQFVCDQDWDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALS---------------------------------------- 300
DE C +C S
Sbjct: 139 DEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEWPQNCGGRDTAAEVVSSPC 198
Query: 301 ---------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+CI +W+CD DC D +DE+ + C P+E +C +
Sbjct: 199 SSLEFHCGSSECIHRSWVCDGAADCK-----DKSDEE-----NCAVTTCRPDEFQC-ADG 247
Query: 352 QCVALSKFCDGKPDCSNGEDE----------GP---------------FCNNKADCE--- 383
C+ S+ CD + DC + DE GP CN+ DC
Sbjct: 248 SCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWS 307
Query: 384 ---------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQ 427
N CSH C G C CP+G + + QC D DEC +C Q
Sbjct: 308 DEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQEPDTCSQ 367
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C N S+ C C G+ + P + C AV ++F++ ++R++ L+ S
Sbjct: 368 LCVNLEGSFKCECRAGFHMDPHTRVCKAVG----SIGFLLFTNRHEVRKMTLDRS 418
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS++ I ++ + D+ S D I+ D DW + Y+ + GT ++A
Sbjct: 447 LSQRKI-YSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
R ++L + ++ + W PA +++K G++G + LVT
Sbjct: 506 VRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVT 557
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
++IQWP+ + +D LYW DS L+++ S+ V+G L HP L
Sbjct: 558 EDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSL 611
>gi|348531738|ref|XP_003453365.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oreochromis niloticus]
Length = 875
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 150/370 (40%), Gaps = 76/370 (20%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDE---GPFCNA----------------- 203
C P + CG S+N+CV+LS CDG+ DC NG DE P C +
Sbjct: 98 CPPEKFDCGGSTNKCVSLSWRCDGEKDCENGADEEDCAPACPSGEFMCANRKCLATVYVC 157
Query: 204 -------------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--- 241
C P C +C+P W CDG DC + + P C
Sbjct: 158 DGDDDCGDGSDELKCTSPLTCGPNHLRCNTSECVPLMWSCDGDPDCSDSSDEGPERCGGD 217
Query: 242 --------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
C +G+ +CA + +C+ W CD + DC D +DE C
Sbjct: 218 GAPYLPNRRANCTSGEFRCA-NGECVRLTWKCDGDPDCK-----DKSDESDCPLLTCRPD 271
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQ 352
+ QC CI C++ DC D++DE NA C P + C + +
Sbjct: 272 EFQCG-DGSCIHGTKQCNKVHDCP-----DHSDES----GCVNATKCEGPLKFLC-KNGE 320
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQNP-N 409
C+ SK CD DC + DE +C N CSH C P G C CP G +
Sbjct: 321 CIDSSKVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCMDRPIGFECQCPTGYRLLD 380
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
K C D DEC +C Q C N + C C EGY + P K+C A + + ++F+
Sbjct: 381 KKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKA----EGKSPYLLFT 436
Query: 470 STVDIRRIHL 479
+ +IRRI L
Sbjct: 437 NRHEIRRIDL 446
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 89/182 (48%), Gaps = 39/182 (21%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCALSK-KCIPH 261
C P +F+C G+C+P W+CDG +C DGSDE TC Q C + C S KC+
Sbjct: 57 CAPAEFACLNGQCVPGRWRCDGEPEC-PDGSDEAEETCSKQTCPPEKFDCGGSTNKCVSL 115
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL---------CDE 312
+W CD E DC +N ++ D C +G+ CA ++KC+ ++ +
Sbjct: 116 SWRCDGEKDC------ENGADEEDCAPACPSGEFMCA-NRKCLATVYVCDGDDDCGDGSD 168
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ C++ + C PN LRC +S +CV L CDG PDCS+ DE
Sbjct: 169 ELKCTS------------------PLTCGPNHLRCNTS-ECVPLMWSCDGDPDCSDSSDE 209
Query: 373 GP 374
GP
Sbjct: 210 GP 211
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 21/102 (20%)
Query: 90 LLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S DL P LD ++EKAGM+G +R LV NI+WP+ + +D
Sbjct: 542 VLVSTDLSEPRAIALDPHHGFMYWSDWGTRAKIEKAGMNGVDRQVLVADNIEWPNGITLD 601
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
LYW DS L+ + SV ++G+H L HP L
Sbjct: 602 VANRRLYWVDSKLHLIASVDLNGAHRRTHMSSAERLGHPYAL 643
>gi|392348189|ref|XP_003750041.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Rattus norvegicus]
Length = 958
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 154/399 (38%), Gaps = 94/399 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE CT F+C G CIPE WKC
Sbjct: 44 CEEDQFRC-RNERCIPSVWRCDEDNDCSDNSDEDDCPKRTCTDSDFTCDNGHCIPERWKC 102
Query: 225 DGFVDCLEDGSDEPN-TCI-HQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 103 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 161
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 162 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 221
Query: 309 LCDEEMDCSTDDIVDNTDEDWD------KYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+CD + DC D +DE + + + C P S +C+ L CDG
Sbjct: 222 VCDGQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTTQFTCRSGECIHLGWRCDG 276
Query: 363 KPDCSNGEDE-----GP------------------FCNNKADC----------------- 382
DC + DE GP CN + DC
Sbjct: 277 DRDCKDKSDEADCSPGPCRENDFQCGDGTCILAIKRCNQERDCLDGSDEAGCLQGLNECL 336
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 337 HNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFKCEC 396
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV S+IF++ ++RRI L
Sbjct: 397 HPGYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 432
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + VS R RC N DL P +D
Sbjct: 491 LHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNR-----DLSEPRAIAVDPL 545
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 546 RGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSS 605
Query: 154 VRVDGSHNAVL 164
+ +G + +L
Sbjct: 606 IDFNGGNRKML 616
>gi|161078641|ref|NP_733118.3| lipophorin receptor 2, isoform A [Drosophila melanogaster]
gi|158030396|gb|AAF56498.4| lipophorin receptor 2, isoform A [Drosophila melanogaster]
Length = 1028
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 144/366 (39%), Gaps = 64/366 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
LC C + QC+ CDG DC +G DE N C +F+CG G+
Sbjct: 275 LCSSLMFMCKNGEQCIHREFMCDGDQDCRDGSDELECGNRTCRSDEFTCGNGRCIQNRFK 334
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTCIH 243
CIP W CDG DC +G DE C
Sbjct: 335 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 393
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 394 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 449
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 450 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCG-GGLCIPNAKV 503
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 504 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 563
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 564 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 619
Query: 475 RRIHLN 480
R+I L+
Sbjct: 620 RKIALD 625
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 144/387 (37%), Gaps = 108/387 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S+ +C+ + CDG DC + DE F + C+ QF CG GKCIP
Sbjct: 193 CDEKQFQC-STGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPR 251
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE + C C + C ++CI ++CD + DC D
Sbjct: 252 RWVCDRENDC-ADGSDESTSQCRGLCSSLMFMCKNGEQCIHREFMCDGDQDCR-----DG 305
Query: 280 TDE--------DWDKFHQCFNGQ--------------------------VQCA------L 299
+DE D+F C NG+ +C
Sbjct: 306 SDELECGNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACK 364
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
S CIP+ W+CD + DC N +++ C E +C C+ S
Sbjct: 365 SGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWV 418
Query: 360 CDGKPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC--S 392
CDG+ DC +GEDE CN K DC + C S
Sbjct: 419 CDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDIS 478
Query: 393 PTPR-----------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCT 430
TPR G +C CP G++ +C + +G C C
Sbjct: 479 ATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCV 538
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
N + Y C C +GY L D +C ++
Sbjct: 539 NLEVGYRCECHDGYKLGADQHTCVDID 565
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 748 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 807
Query: 167 PNE 169
E
Sbjct: 808 SGE 810
>gi|47227965|emb|CAF97594.1| unnamed protein product [Tetraodon nigroviridis]
Length = 868
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 153/373 (41%), Gaps = 79/373 (21%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDE------------GPFCNA-------- 203
C P + CG S+N+CV+LS CDG+ DC NG DE G F A
Sbjct: 45 CPPEKFDCGGSTNKCVSLSWRCDGEKDCENGADEEDCASDAKACPSGEFMCANRKCLATT 104
Query: 204 ----------------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
C P C +C+P W CDG DC + + P C
Sbjct: 105 YVCDGDDDCGDGSDELKCGSPLTCGPDHLRCNTSECVPLMWSCDGDPDCSDSSDEGPERC 164
Query: 242 -----------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
C G+ +CA + +C+ W CD + DC D +DE C
Sbjct: 165 GGDGAPYLLNRRANCSAGEFRCA-NGECVRLTWKCDGDPDCK-----DKSDESDCPLLTC 218
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGS 349
+ QC CI C++ DC VD++DE NA C P + C
Sbjct: 219 RPDEFQCG-DGSCIHGTKQCNKVHDC-----VDHSDESG----CVNATKCEGPLKFLC-K 267
Query: 350 SNQCVALSKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAG-Q 406
+ +C+ S+ CD DC + DE C N+ N CSH C P G C CPAG Q
Sbjct: 268 NGECIDSSRVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCVDQPIGFDCQCPAGYQ 327
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
++ C D DEC +C Q C N + C C EGY + P K+C A + + +
Sbjct: 328 LLDRKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKA----EGKSPYL 383
Query: 467 IFSSTVDIRRIHL 479
+F++ +IRRI L
Sbjct: 384 LFTNRHEIRRIDL 396
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 146/360 (40%), Gaps = 92/360 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCG--MGKCIPE 220
C P E C + QCV CDG+P+C +G DE C+ + C P +F CG KC+
Sbjct: 4 CAPAEFAC-LNGQCVPGRWRCDGEPECPDGSDEAEETCSIQTCPPEKFDCGGSTNKCVSL 62
Query: 221 SWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWL-------------- 264
SW+CDG DC E+G+DE + C +G+ CA ++KC+ ++
Sbjct: 63 SWRCDGEKDC-ENGADEEDCASDAKACPSGEFMCA-NRKCLATTYVCDGDDDCGDGSDEL 120
Query: 265 -CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI 321
C + C D + NT E C+P W CD + DC S+D+
Sbjct: 121 KCGSPLTCGPDHLRCNTSE--------------------CVPLMWSCDGDPDCSDSSDEG 160
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PF---- 375
+ D Y + C E RC ++ +CV L+ CDG PDC + DE P
Sbjct: 161 PERCGGDGAPYLLNRRANCSAGEFRC-ANGECVRLTWKCDGDPDCKDKSDESDCPLLTCR 219
Query: 376 -----------------CNNKADCENLKCSHKCSPTPR--GAMCF-CPAGQNPNKTQCVD 415
CN DC + C + G + F C G+ + ++ D
Sbjct: 220 PDEFQCGDGSCIHGTKQCNKVHDCVDHSDESGCVNATKCEGPLKFLCKNGECIDSSRVCD 279
Query: 416 A-----------------DECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +EC+I +G C C + + + C C GY L D K+C ++
Sbjct: 280 SVKDCKDRSDEPKKECGLNECMINNGGCSHVCVDQPIGFDCQCPAGYQLL-DRKTCGDID 338
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 62/134 (46%), Gaps = 22/134 (16%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------------ 105
LAL++ N +++S + A +L S DL P LD
Sbjct: 461 LALDWLQHNLYWTDSGDKSISVASVD-ATKRRVLISTDLSEPRSIALDPHHGFMYWSDWG 519
Query: 106 --ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA- 162
++EKAGM+G +R LV +I+WP+ + +D LYW DS L+ + SV ++G+H
Sbjct: 520 TRAKIEKAGMNGVDRQVLVADSIEWPNGITLDVANRRLYWVDSKLHLIASVDLNGAHRRT 579
Query: 163 ------VLCHPNEL 170
+L HP L
Sbjct: 580 HMSSAEMLGHPYAL 593
>gi|345800486|ref|XP_003434709.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Canis lupus familiaris]
Length = 702
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 127/279 (45%), Gaps = 21/279 (7%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C QF C +CIP W+CD DC D SDE + C + C + CIP W
Sbjct: 49 CEEDQFRCRNERCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCG-NGHCIPERWK 106
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E +C D D ++ K C ++ C S KC+P +W CD E DC +
Sbjct: 107 CDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPASHKCVPASWRCDGEKDCES----- 158
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC- 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 159 GADE---AGCATSLGTCRGDEFQCGDGT-CVPTLKRCNQEQDCPDGSDEAGCLQGLNECL 214
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 215 HNNGGCSHICTDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCEC 274
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV + S+IF++ ++RRI L
Sbjct: 275 HPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 310
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + A+ L S DL P +D
Sbjct: 369 LHSPEGLAVDWVHKHIYWTDSGNKTISVATMDGARRCTLF-SRDLSEPRAIAVDPLRGFM 427
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 428 YWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLS 487
Query: 158 GSHNAVL 164
G + +L
Sbjct: 488 GGNRKML 494
>gi|170074436|ref|XP_001870571.1| pro-epidermal growth factor [Culex quinquefasciatus]
gi|167871294|gb|EDS34677.1| pro-epidermal growth factor [Culex quinquefasciatus]
Length = 513
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 142/343 (41%), Gaps = 79/343 (23%)
Query: 158 GSHNAV------LCHP---NELRCGSSN-QCVALSKFCDGKPDCSNGEDEG-------PF 200
G HN+V LC P RC N C++ S CD DC G+DE P
Sbjct: 2 GHHNSVVVSFRLLCVPIDERGYRCKHDNGTCISASFLCDKHDDCPLGDDEENCENFEVPH 61
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI- 259
C+ +F+C CIP+ CDG CL DGSDE C+ + +K C+
Sbjct: 62 VPVPCSKFEFTCTDKMCIPKDLVCDGTRHCL-DGSDETIGCMDVENKCKGFLCKNKHCVQ 120
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
H+W+CD DD D +DE+ CF G C L
Sbjct: 121 SHDWVCD-----GVDDCGDGSDEE-----NCFIG---CTLEH------------------ 149
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK 379
+ C ++ CV L CDGK DC + DE C ++
Sbjct: 150 -----------------------GKFECADNSTCVDLKMVCDGKDDCGDRSDETGLCTSR 186
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+C++++C C TP G++C C AG + QC D +EC G C Q C NT S+
Sbjct: 187 -ECDSMRCPEGCKNTPHGSVCLCKAGFVFDRKSKQCEDVNECERYGLCSQGCENTPGSFR 245
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
C+C + LR DG++C + A +++++ I ++L
Sbjct: 246 CTCASKFKLRKDGRTC---EIADSTEALLLYTTQKSIGALYLT 285
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA----- 162
+ AGM G+NR L+ +NI WP+ L +D+ LYW D+ L +ESVR+DG+
Sbjct: 408 IGTAGMDGKNRRVLIDENIHWPNGLSLDWPNGRLYWVDAKLKKIESVRLDGTQRTTVIGD 467
Query: 163 VLCHP 167
VL HP
Sbjct: 468 VLKHP 472
>gi|161078651|ref|NP_001097930.1| lipophorin receptor 2, isoform G [Drosophila melanogaster]
gi|158030401|gb|ABW08770.1| lipophorin receptor 2, isoform G [Drosophila melanogaster]
Length = 1063
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 144/366 (39%), Gaps = 64/366 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK------- 216
LC C + QC+ CDG DC +G DE N C +F+CG G+
Sbjct: 275 LCSSLMFMCKNGEQCIHREFMCDGDQDCRDGSDELECGNRTCRSDEFTCGNGRCIQNRFK 334
Query: 217 ---------------------------------CIPESWKCDGFVDCLEDGSDEPNTCIH 243
CIP W CDG DC +G DE C
Sbjct: 335 CDDDDDCGDGSDEKNCGEKAKCGSNFFACKSGPCIPNQWVCDGDSDC-RNGEDEMQNCTV 393
Query: 244 QCFN----GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
N G+ QC+ C+ +W+CD E DC D D + + K C Q QC
Sbjct: 394 SLLNFCQAGEFQCSDRITCLHKSWVCDGEADCP--DGEDESQSNCLKV-SCRPDQFQCN- 449
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ CI + C+ + DC+ D +DE + E CG C+ +K
Sbjct: 450 DQSCIAGHLTCNGKRDCA-----DGSDEIMCDISATPRTCNATTEFDCG-GGLCIPNAKV 503
Query: 360 CDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ--CVD 415
C+ + DC NGEDE G N+ +N C H+C G C C G Q CVD
Sbjct: 504 CNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCVNLEVGYRCECHDGYKLGADQHTCVD 563
Query: 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYT-LRPDGKSCTAVNVPQDEPASIIFSSTVDI 474
DEC G C Q C N ++ C C GY L + C A + AS++ + DI
Sbjct: 564 IDECETPGICSQVCVNEIGAFKCECEAGYMRLLKNHTRCKA----SEGHASLLLARRHDI 619
Query: 475 RRIHLN 480
R+I L+
Sbjct: 620 RKIALD 625
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 144/387 (37%), Gaps = 108/387 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S+ +C+ + CDG DC + DE F + C+ QF CG GKCIP
Sbjct: 193 CDEKQFQC-STGECIPIRFVCDGSSDCPDHSDERLEECKFTESTCSQEQFRCGNGKCIPR 251
Query: 221 SWKCDGFVDCLEDGSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE + C C + C ++CI ++CD + DC D
Sbjct: 252 RWVCDRENDC-ADGSDESTSQCRGLCSSLMFMCKNGEQCIHREFMCDGDQDCR-----DG 305
Query: 280 TDE--------DWDKFHQCFNGQ--------------------------VQCA------L 299
+DE D+F C NG+ +C
Sbjct: 306 SDELECGNRTCRSDEF-TCGNGRCIQNRFKCDDDDDCGDGSDEKNCGEKAKCGSNFFACK 364
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
S CIP+ W+CD + DC N +++ C E +C C+ S
Sbjct: 365 SGPCIPNQWVCDGDSDCR------NGEDEMQNCTVSLLNFCQAGEFQCSDRITCLHKSWV 418
Query: 360 CDGKPDCSNGEDEGP-------------------------FCNNKADCENLKCSHKC--S 392
CDG+ DC +GEDE CN K DC + C S
Sbjct: 419 CDGEADCPDGEDESQSNCLKVSCRPDQFQCNDQSCIAGHLTCNGKRDCADGSDEIMCDIS 478
Query: 393 PTPR-----------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCT 430
TPR G +C CP G++ +C + +G C C
Sbjct: 479 ATPRTCNATTEFDCGGGLCIPNAKVCNRRKDCPNGEDEPAGKCGINECSSKNGGCMHQCV 538
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
N + Y C C +GY L D +C ++
Sbjct: 539 NLEVGYRCECHDGYKLGADQHTCVDID 565
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS + +
Sbjct: 748 RIERAGMDGTHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSSNYDGSQRHQVLY 807
Query: 167 PNE 169
E
Sbjct: 808 SGE 810
>gi|341896183|gb|EGT52118.1| hypothetical protein CAEBREN_22936 [Caenorhabditis brenneri]
Length = 921
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 157/373 (42%), Gaps = 78/373 (20%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
G QC+ + CD DC NG+DE G C+ GQ C G+CI +KCD DC
Sbjct: 39 GQQLQCIPVEWQCDNINDCENGKDELGCTYAHHCSSGQMMCKNGRCIAGEFKCDAEDDC- 97
Query: 232 EDGSDE--------------------PNTCIHQ----CFNGQVQCALSKKCIPHNWLCDE 267
DGSDE PNT + C +++C S +CI + +CD
Sbjct: 98 SDGSDEMHCEYNAYRPVLDRHSISPSPNTFVGHNGPPCEPPRMRCR-SGQCIQKDLICDG 156
Query: 268 EMDCSTDDIVDN----------------------TDEDWDKFHQCFNGQVQCALSKKCIP 305
DC+ D N T +D+ K +C G C + CIP
Sbjct: 157 HEDCTGGDDEVNCTRVTVEEAKRPDIHDADPTILTHDDYAK-EECRPGYSMCFNADVCIP 215
Query: 306 HNWLCDEEMDC--STDDIVDNTDEDWDKYF-----SHNAVLCHPNELRC----GSSNQCV 354
+++LCD E DC +D+I +E ++ F H + C G N C+
Sbjct: 216 NSFLCDGEKDCDDGSDEINCELNEPTEEQFLSGQADHMHACSAAGKFACETKEGEMNVCL 275
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQ 412
++ C+G +C G+DE C ++C +C H C TP GA C C G + +
Sbjct: 276 PMNATCNGIKECPLGDDESKQC---SECARKRCDHTCMNTPHGARCICQEGYTLSSDGVT 332
Query: 413 CVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS-----I 466
C D DEC G C C + S+VC C GY L DG SC Q EP++ +
Sbjct: 333 CEDEDECATHGHICQHFCEDRLGSFVCKCANGYQLDVDGHSC------QYEPSTTSEGYL 386
Query: 467 IFSSTVDIRRIHL 479
S ++R++ L
Sbjct: 387 FISIGGEVRQMPL 399
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 136/327 (41%), Gaps = 83/327 (25%)
Query: 197 EGPFCNAEC-TPGQFSCGMGK---CIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQ 251
+ P N+ C + F CG G+ CIP W+CD DC E+G DE T H C +GQ+
Sbjct: 20 QAPVTNSTCDSAKHFDCGTGQQLQCIPVEWQCDNINDC-ENGKDELGCTYAHHCSSGQMM 78
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---DWDKFHQCF---------------NG 293
C + +CI + CD E DCS D +DE +++ + NG
Sbjct: 79 CK-NGRCIAGEFKCDAEDDCS-----DGSDEMHCEYNAYRPVLDRHSISPSPNTFVGHNG 132
Query: 294 ------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDN----TDEDWDKYFSHNA---VL- 339
+++C S +CI + +CD DC+ D N T E+ + H+A +L
Sbjct: 133 PPCEPPRMRCR-SGQCIQKDLICDGHEDCTGGDDEVNCTRVTVEEAKRPDIHDADPTILT 191
Query: 340 --------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNNKAD 381
C P C +++ C+ S CDG+ DC +G DE F + +AD
Sbjct: 192 HDDYAKEECRPGYSMCFNADVCIPNSFLCDGEKDCDDGSDEINCELNEPTEEQFLSGQAD 251
Query: 382 -------CENLKCSHKCSPT----PRGAMC----FCPAGQNPNKTQCVDADECLIDGSCD 426
C K P A C CP G + +K QC EC CD
Sbjct: 252 HMHACSAAGKFACETKEGEMNVCLPMNATCNGIKECPLGDDESK-QC---SECA-RKRCD 306
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSC 453
TC NT C C EGYTL DG +C
Sbjct: 307 HTCMNTPHGARCICQEGYTLSSDGVTC 333
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 93/242 (38%), Gaps = 65/242 (26%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------------- 197
HN C P +RC S QC+ CDG DC+ G+DE
Sbjct: 129 GHNGPPCEPPRMRC-RSGQCIQKDLICDGHEDCTGGDDEVNCTRVTVEEAKRPDIHDADP 187
Query: 198 -----GPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-----QCF 246
+ EC PG C CIP S+ CDG DC +DGSDE N ++ Q
Sbjct: 188 TILTHDDYAKEECRPGYSMCFNADVCIPNSFLCDGEKDC-DDGSDEINCELNEPTEEQFL 246
Query: 247 NGQV----QCALSKK------------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+GQ C+ + K C+P N C+ +C D D+ QC
Sbjct: 247 SGQADHMHACSAAGKFACETKEGEMNVCLPMNATCNGIKECPLGD---------DESKQC 297
Query: 291 FN-GQVQCALSKKCIPHNW--LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+ +C + PH +C E S+D + T ED D+ +H + H E R
Sbjct: 298 SECARKRCDHTCMNTPHGARCICQEGYTLSSDGV---TCEDEDECATHGHICQHFCEDRL 354
Query: 348 GS 349
GS
Sbjct: 355 GS 356
>gi|383858341|ref|XP_003704660.1| PREDICTED: vitellogenin receptor-like [Megachile rotundata]
Length = 1745
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/361 (29%), Positives = 155/361 (42%), Gaps = 58/361 (16%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ + C+ NE +C +C++ C+G+ DC++ DE C F+C G CIP+
Sbjct: 970 DKIECNSNEFQC-HEGECISKYLVCNGRFDCTDMSDELNCDKHTCDNNSFTCDSGTCIPK 1028
Query: 221 SWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+WKCDG DC D SDE C I C C+ + +CI + C+ DC DN
Sbjct: 1029 TWKCDGEFDC-PDESDESGECTITTCPTEMFTCS-TGRCIDMSLKCNGINDCE-----DN 1081
Query: 280 TDEDW------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD------------- 320
+DE + + + C Q +C ++ C+P CD +C +D
Sbjct: 1082 SDEQYCDKTDNNNYVNCTGDQYKCYGTEMCLPKTVKCDGVQNCPKNDDERNCPRCQVGEY 1141
Query: 321 ------------IVDNTDEDWDKY------FSHNAVLCHPNELRCG----SSNQCVALSK 358
+ DN D+ D S + N L C S+ C+ SK
Sbjct: 1142 ICDNQKCIDASWVCDNADDCGDGSDEMGCDGSTTKMRTIGNSLNCKEFNCSNGVCLPFSK 1201
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416
CDG DC + DE C+ A +N C + C TP G +C C +G + + C D
Sbjct: 1202 VCDGVADCLDRSDEFGQCS-IACTKNDPCKNVCHKTPLGPVCGCGSGYQLSTDLKSCEDI 1260
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
+EC C Q C NT S+VCSC E Y LR D SC + +I S DIR+
Sbjct: 1261 NECE-QNVCSQICHNTDGSFVCSCFEEYVLRNDRTSCKV----GGQQMELITVSGSDIRK 1315
Query: 477 I 477
+
Sbjct: 1316 L 1316
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 133/330 (40%), Gaps = 66/330 (20%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNAECTPGQFSCG 213
+A+ C P + + +C+++ CDG+ DC + DE +C +F C
Sbjct: 21 SAIRCEPPDHFLCKNEKCISVVFKCDGENDCGDESDELDCRDFKFTHTAIQCAADEFRCA 80
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP CD DC + G DE + C+ + +C C+ + W+CD DC
Sbjct: 81 DNVCIPIEKFCDAKPDCFDKG-DEYDGCVKELKCDAFRCN-DGYCVRNEWVCDGVKDCPD 138
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
N FH+C N + D+Y
Sbjct: 139 GSDEGNCGNQTIPFHKCNN-----------------------------------EIDRYL 163
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENLKCSHK 390
N +C+ L+ C+GK DC + DE KAD ++ C H
Sbjct: 164 CKN--------------KRCIFLNATCNGKDDCGDDSDENVEGCKKADASCKQSAHCEHY 209
Query: 391 CSPTPRGAMCFCPAGQNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C TP GA C C G +K + C D +EC I G CDQ C N+ SY CSC GY L D
Sbjct: 210 CRKTPEGAQCSCKTGYKLSKNRTCTDVNECEIFGICDQQCINSAGSYKCSCHSGYLLNDD 269
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G++C A A ++FS +IR ++L
Sbjct: 270 GRTCYA----DGGEAVMVFSIKSEIRGLYL 295
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 26/237 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----AECTPGQFSCGMGKCIPE 220
C E++C + C+ + + CDG DC NGEDE C + C QF C G+CI +
Sbjct: 891 CKAGEVKCSEHDVCIKMHQRCDGVQDCPNGEDESSICEEPVWSNCEHDQFRCKSGECISK 950
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ C+ DC+ D SDE + +C + + QC +CI +C+ DC+ D +
Sbjct: 951 TKLCNSHYDCM-DRSDEEDCDKIECNSNEFQCH-EGECISKYLVCNGRFDCT-----DMS 1003
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE H C N C S CIP W CD E DC D +DE +
Sbjct: 1004 DELNCDKHTCDNNSFTCD-SGTCIPKTWKCDGEFDCP-----DESDES-----GECTITT 1052
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS---HKCSPT 394
P E+ S+ +C+ +S C+G DC + DE +C+ + + C+ +KC T
Sbjct: 1053 CPTEMFTCSTGRCIDMSLKCNGINDCEDNSDE-QYCDKTDNNNYVNCTGDQYKCYGT 1108
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 10/123 (8%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+H A+ C +E RC + N C+ + KFCD KPDC + DE C E F C G C+
Sbjct: 66 THTAIQCAADEFRC-ADNVCIPIEKFCDAKPDCFDKGDEYDGCVKELKCDAFRCNDGYCV 124
Query: 219 PESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDC 271
W CDG DC DGSDE N H+C N ++ L +K+CI N C+ + DC
Sbjct: 125 RNEWVCDGVKDC-PDGSDEGNCGNQTIPFHKC-NNEIDRYLCKNKRCIFLNATCNGKDDC 182
Query: 272 STD 274
D
Sbjct: 183 GDD 185
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 96 LPAPEIFPLDE-----RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
LP+ I E R+ +GM G+N S L+ +++WP+SL IDY + LYW DS L
Sbjct: 402 LPSNGIMYWSEWGAKSRILMSGMDGKNSSALIVDSLEWPNSLSIDYASNRLYWVDSKLKI 461
Query: 151 VESVRVDGSHNAVL 164
+ESV +DGS ++
Sbjct: 462 IESVGLDGSDRRIV 475
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 9/92 (9%)
Query: 85 AQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
+Q+N +L+ D+P +I+ ++ G N + +V++N +L IDY + LYW
Sbjct: 1435 SQVNWMLH--DVPTSKIY-------RSTTVGSNATVIVSRNTGVVYALAIDYIRSRLYWT 1485
Query: 145 DSHLNTVESVRVDGSHNAVLCHPNELRCGSSN 176
D+ L +ES +DGS+ A+ + + S N
Sbjct: 1486 DTFLKIIESANLDGSNRAIFLKTDAYQALSIN 1517
>gi|355703149|gb|EHH29640.1| Low-density lipoprotein receptor, partial [Macaca mulatta]
Length = 837
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/375 (30%), Positives = 154/375 (41%), Gaps = 78/375 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE C+ +F C GKCI
Sbjct: 44 SVTCKSGDFSCGGRVNRCIPQFWRCDGEVDCENGSDEQDCPPKTCSQDEFRCHDGKCIYR 103
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CD DCL DGSDE + + C QC S CIP W CD + DC D +
Sbjct: 104 QFVCDSDRDCL-DGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGS 156
Query: 281 DEDWDKFHQ-----------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DE W + Q C + C S +CI W CD DC D +DE+
Sbjct: 157 DE-WPQHCQGLEVPKRDSSPCSAFEFHCR-SGECIHSGWRCDGGPDCK-----DKSDEE- 208
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP----- 374
+ C P+E +C S C+ S+ CD + DC + D EGP
Sbjct: 209 ----NCPVATCRPDEFQC-SDGTCIHGSRQCDREYDCKDMSDEVGCINVTLCEGPNKFKC 263
Query: 375 ----------FCNNKADC-----ENLKCSHKCSPTPRGAMCFCPAGQ-----------NP 408
CN DC E +K + SP F P P
Sbjct: 264 HSGECISLDKVCNMARDCRDWSDEPIKECGELSPGCLRRYGFWPGSHCSVSSHWGGVPPP 323
Query: 409 NKTQCV-DADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
+ C+ D DEC +C Q C N SY C C EG+ L P K+C AV A +I
Sbjct: 324 SLFLCLPDIDECQDPNTCSQLCVNLEGSYKCQCEEGFQLDPHTKACKAVG----SIAYLI 379
Query: 468 FSSTVDIRRIHLNGS 482
F++ ++R++ L+ S
Sbjct: 380 FTNRHEVRKMTLDRS 394
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 6 CERNEFQC-EDGKCISYKWVCDGTAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 64
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC E+GSDE + C + +C KCI ++CD + DC +D +
Sbjct: 65 FWRCDGEVDC-ENGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC-----LDGS 117
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY------FS 334
DE C QC S CIP W CD + DC D +DE W ++
Sbjct: 118 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQHCQGLEVPK 170
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ CDG PDC + DE
Sbjct: 171 RDSSPCSAFEFHC-RSGECIHSGWRCDGGPDCKDKSDE 207
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 5 RCERNEFQCEDGKCISYKWVCDGTAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 63
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD E+DC + +DE C + +C KCI ++CD + DC
Sbjct: 64 QFWRCDGEVDCE-----NGSDEQDCPPKTCSQDEFRCH-DGKCIYRQFVCDSDRDC---- 113
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 114 -LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 160
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NI+WP+ + +D+ LYW DS L+++ S
Sbjct: 513 WGTPA--------KIKKGGLNGVDIYSLVTENIEWPNGITLDFPSGRLYWVDSKLHSISS 564
Query: 154 VRVDGSHNAVLCHPNE 169
+ V+G + + E
Sbjct: 565 IDVNGGNRKTVLEDKE 580
>gi|270009366|gb|EFA05814.1| hypothetical protein TcasGA2_TC008596 [Tribolium castaneum]
Length = 1044
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 159/412 (38%), Gaps = 110/412 (26%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
S +A C P C S QC+ CDG DC EDE + C +F C G CI
Sbjct: 333 SIDAKKCPPGHFMC-KSGQCINERLVCDGVKDCLEEEDEANCVSTVCKDYEFRCQSGACI 391
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
P++W+CD DC D SDE + C C C + KCI +++CD+E DCS D
Sbjct: 392 PKNWECDHDYDC-PDFSDEHSGCA-SCDASTFTCN-NGKCIDKSFVCDKENDCS-----D 443
Query: 279 NTDE---------DWDKF------HQCF------NGQVQCALSK---------------- 301
N+DE D +F H C NG +C +
Sbjct: 444 NSDELSCVMENSCDLSEFSCSLHTHICLPDSARCNGTSECPHHEDEQNCSNCQVDEFSCN 503
Query: 302 --KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
KCIP W+CD DC +D++ + ++ ++ + + + RC + N C+ S
Sbjct: 504 NTKCIPREWICDHSDDCGDGSDEVPSLCNHTIPEHATNFSCI---DRFRCRNGN-CIDFS 559
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG----QNPNKTQC 413
C+ +P+C +G DE CN N CS C TP G C C G +N Q
Sbjct: 560 LVCNKEPNCYDGSDEEGLCNTSCSALNNPCSQICVKTPTGPTCKCQGGYQLRENELCEQG 619
Query: 414 VDADECLIDGS------------------------------------------------C 425
VD E + G C
Sbjct: 620 VDFKEKMKIGRDWERRGRTSASQKYESDDEIVGRERKRENEGDGHTCEDINECAEHPPVC 679
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
Q C N+ SY C C EG+ LR D SC A + S+IFSS IR I
Sbjct: 680 SQICHNSEGSYSCDCYEGFALRTDRTSCKA----KGTAMSLIFSSNNQIREI 727
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/379 (27%), Positives = 138/379 (36%), Gaps = 120/379 (31%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN-------------- 202
C +E C SN C+ CDG+ +C NGEDE P+ N
Sbjct: 257 CTSHEFFCSGSNSCIFKKFRCDGERNCPNGEDETDCKELNHCPWNNFQCHDGECIDERFK 316
Query: 203 --------------------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
+C PG F C G+CI E CDG DCLE+ DE N
Sbjct: 317 CDYKFDCRDKSDERNCSIDAKKCPPGHFMCKSGQCINERLVCDGVKDCLEE-EDEANCVS 375
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-------DWDKFHQCFNGQV 295
C + + +C S CIP NW CD + DC D +DE D F C NG
Sbjct: 376 TVCKDYEFRCQ-SGACIPKNWECDHDYDCP-----DFSDEHSGCASCDASTF-TCNNG-- 426
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---------DWDKYF-SHNAVLCHPNEL 345
KCI +++CD+E DCS DN+DE D ++ S + +C P+
Sbjct: 427 ------KCIDKSFVCDKENDCS-----DNSDELSCVMENSCDLSEFSCSLHTHICLPDSA 475
Query: 346 RCGSSNQ------------------------CVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
RC +++ C+ CD DC +G DE P CN+
Sbjct: 476 RCNGTSECPHHEDEQNCSNCQVDEFSCNNTKCIPREWICDHSDDCGDGSDEVPSLCNHTI 535
Query: 381 --DCENLKCSHKCSPTPRGAMCFCPA-GQNPNKTQCVDADE---------CLIDGSCDQT 428
N C + + F + PN C D + ++ C Q
Sbjct: 536 PEHATNFSCIDRFRCRNGNCIDFSLVCNKEPN---CYDGSDEEGLCNTSCSALNNPCSQI 592
Query: 429 CTNTHLSYVCSCTEGYTLR 447
C T C C GY LR
Sbjct: 593 CVKTPTGPTCKCQGGYQLR 611
>gi|148227800|ref|NP_001079111.1| low-density lipoprotein receptor 2 precursor [Xenopus laevis]
gi|547839|sp|Q99088.1|LDLR2_XENLA RecName: Full=Low-density lipoprotein receptor 2; Short=LDL
receptor 2; Flags: Precursor
gi|214578|gb|AAA49898.1| low density lipoprotein receptor-2 [Xenopus laevis]
Length = 892
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 153/374 (40%), Gaps = 74/374 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A+ C ++ CG N+C+ +S CDG+ DC NG DE C QF+C GKCI
Sbjct: 64 RALTCGADQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCIS 123
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDE-- 237
P+ W CDG DC EDGSDE
Sbjct: 124 LDFVCDQDQDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDC-EDGSDEDH 182
Query: 238 -----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
P C + C S +CI +W CD DC + D+D K C
Sbjct: 183 CEGREPIKTDKPCAPLEFHCG-SGECIHMSWKCDAGYDCKHK----SDDKDCVK-PTCRP 236
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSN 351
Q QC CI + CD E DC D +DE+ N C P+ +C S
Sbjct: 237 DQFQCN-DGTCIHGSRQCDREYDCK-----DLSDEEG----CVNVTKCQGPDVFKC-RSG 285
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN-P 408
+C+ + K C K DC + DE + +C N CSH C+ G C C G
Sbjct: 286 ECITMDKVCHKKRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
++ +C D +EC +C Q C N H Y C C EGY + P SC ++ A + F
Sbjct: 346 DQKRCEDINECENPNTCTQICINLHGGYKCECREGYQMDPVTASCKSIGT----VAYLFF 401
Query: 469 SSTVDIRRIHLNGS 482
++ ++R++ L+ S
Sbjct: 402 TNRHEVRKMTLDRS 415
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 119/338 (35%), Gaps = 91/338 (26%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TC-IHQCFNGQVQCALS-KKCI 259
+C +F CG GKCIP W CDG +C +DGSDE + TC C Q C +CI
Sbjct: 25 GKCDRNEFQCGDGKCIPYKWICDGSAEC-KDGSDESSETCRALTCGADQFSCGGRLNRCI 83
Query: 260 PHNWLCDEEMDCSTD--------------------------DIV--------DNTDEDWD 285
P +W CD + DC D V D +DE +
Sbjct: 84 PMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCISLDFVCDQDQDCDDGSDESYC 143
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHNAVLCHPN 343
C QC CIP W CD + DC D +DED + C P
Sbjct: 144 PAPTCNPAMFQCKDKGICIPKLWACDGDRDCE-----DGSDEDHCEGREPIKTDKPCAPL 198
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKA 380
E CG S +C+ +S CD DC + D+ C+ +
Sbjct: 199 EFHCG-SGECIHMSWKCDAGYDCKHKSDDKDCVKPTCRPDQFQCNDGTCIHGSRQCDREY 257
Query: 381 DCENLKCSHKCSPTP----------RGAMCFCPAGQNPNKTQCVD----------ADECL 420
DC++L C R C K C D +ECL
Sbjct: 258 DCKDLSDEEGCVNVTKCQGPDVFKCRSGECITMDKVCHKKRDCRDWTDEPIKECGENECL 317
Query: 421 I-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C + + Y C C EGY L D K C +N
Sbjct: 318 RNNGGCSHICNDLKIGYECLCNEGYRL-VDQKRCEDIN 354
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ + G + +
Sbjct: 586 IDITGENRRTV 596
>gi|405958930|gb|EKC25011.1| Prolow-density lipoprotein receptor-related protein 1 [Crassostrea
gigas]
Length = 1181
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 158/402 (39%), Gaps = 94/402 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGM-GKCIPESW 222
C N +C + QC++ +CDG PDC +G DE C+ + C G C G+C PESW
Sbjct: 101 CDSNMFKC-DNGQCISYVWWCDGDPDCHDGSDEKKTCSLQDCKKGYIKCNTTGRCYPESW 159
Query: 223 KCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CDG DC DGSDE P C +C NG S +CI W CD + DC D D D
Sbjct: 160 QCDGDADCGTDGSDESPEVCNKKCENGTQWQCASGQCISKVWRCDFDKDCH--DGSDEKD 217
Query: 282 EDWDKFHQCFNGQVQCALSK---------------------------------------K 302
+ +C + +C S+
Sbjct: 218 CQTGDYRECSEAEFRCNNSRCIHKSFLCDGEYNCEDSSDEANCKTTHHCESETEFSCNTM 277
Query: 303 CIPHNWLCDEEMDCST-DDIVDNTDEDWDKYFSHNAVLCHP------------------- 342
CI +W CD E+DC T +D ++ DE D F C P
Sbjct: 278 CIQKSWRCDGEIDCPTGEDEINCADEKCDGGFKCTMGPCLPSYWQCDGDSDCPDGSDENR 337
Query: 343 ------------NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNNKADCENLKCSH 389
+E C ++ C+ +SK C+G+ DC +DE C++ C C H
Sbjct: 338 THCSFKPNRCSHDEYTCNKTSNCIPMSKVCNGERDCMTADDESQALCSHTTRCVRSPCQH 397
Query: 390 KCS--PTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYV----CSC- 440
C+ + C C +G + N C + D C I G+C Q C + + CSC
Sbjct: 398 MCTNYSSINRFKCSCKSGYTLDQNGFSCNETDACQIWGTCPQQCQSVLSEQMKRPNCSCS 457
Query: 441 ---TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
T GY + + +C A + D I+ + +I + +
Sbjct: 458 VNYTSGYLMNTNIHTCYAKGLKPD----ILLAHETEIIKAGV 495
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 164/421 (38%), Gaps = 133/421 (31%)
Query: 167 PNELRC--GSSNQ--CVALSKFCDGKPDCSNGEDEGPFC--NAECTPG------------ 208
P E +C SN+ CV + CDG P CSN DE PF N C PG
Sbjct: 18 PGEFKCRHNGSNETDCVNPVEICDGTPQCSNKWDEDPFVCLNFTCLPGFTKCVNESKCIP 77
Query: 209 ---------------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
F C G+CI W CDG DC DGSDE TC
Sbjct: 78 SADLCEDPNCNPVFYKNNCSNKDCDSNMFKCDNGQCISYVWWCDGDPDC-HDGSDEKKTC 136
Query: 242 -IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG-QVQCAL 299
+ C G ++C + +C P +W CD + DC TD D + E +K +C NG Q QCA
Sbjct: 137 SLQDCKKGYIKCNTTGRCYPESWQCDGDADCGTDG-SDESPEVCNK--KCENGTQWQCA- 192
Query: 300 SKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDW---DKYFSHNAVLC------- 340
S +CI W CD +E DC T D + ++ ++ + H + LC
Sbjct: 193 SGQCISKVWRCDFDKDCHDGSDEKDCQTGDYRECSEAEFRCNNSRCIHKSFLCDGEYNCE 252
Query: 341 -HPNELRCGSSNQCVALSKF------------CDGKPDCSNGEDE---------GPF--- 375
+E C +++ C + ++F CDG+ DC GEDE G F
Sbjct: 253 DSSDEANCKTTHHCESETEFSCNTMCIQKSWRCDGEIDCPTGEDEINCADEKCDGGFKCT 312
Query: 376 ----------CNNKADC-----ENL--------KCSH---KCSPT----PRGAMCF---- 401
C+ +DC EN +CSH C+ T P +C
Sbjct: 313 MGPCLPSYWQCDGDSDCPDGSDENRTHCSFKPNRCSHDEYTCNKTSNCIPMSKVCNGERD 372
Query: 402 CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHL--SYVCSCTEGYTLRPDGKSCTAVNVP 459
C + ++ C C + C CTN + CSC GYTL +G SC +
Sbjct: 373 CMTADDESQALCSHTTRC-VRSPCQHMCTNYSSINRFKCSCKSGYTLDQNGFSCNETDAC 431
Query: 460 Q 460
Q
Sbjct: 432 Q 432
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A + G R LV ++I WP+ + IDY +YW D+ T+E+ ++G V+
Sbjct: 635 KIESANLDGSGRKVLVNEDIIWPNGIAIDYPNSRIYWVDTKKQTIETSDMEGQDRHVV 692
>gi|24763|emb|CAA38905.1| alpha-2 macroglobulin receptor [Homo sapiens]
Length = 591
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 186/460 (40%), Gaps = 79/460 (17%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q QC+++K+CIP W+CD + DC VD +DE + ++ G EF
Sbjct: 179 CAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDEPAN--CTQMTCGVD----EFRC 227
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
++ C R +C +D + D P E DER E
Sbjct: 228 KDSGRCI-------PARWKCDGEDDCGDGSDEPKEEC---DERT------CEPYQFRCKN 271
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
N P DY+ D D T C +E C ++ +C+A
Sbjct: 272 NRCVPGRWQCDYDNDCGDNSDEESCTPRP-----------CSESEFSC-ANGRCIAGRWK 319
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCI 242
CDG DC++G DE C C QF C G CIP W+CD DC+ DGSDE T +
Sbjct: 320 CDGDHDCADGSDEKD-CTPRCDMDQFQCKSGHCIPLRWRCDADADCM-DGSDEEACGTGV 377
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
C + QC + C P W CD E DC D D E+ +F N +C +
Sbjct: 378 RTCPLDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPEECARFVCPPNRPFRCKNDRV 434
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
C+ CD TD+ D TD ED + +H E C + +C++ S C+
Sbjct: 435 CLWIGRQCD-----GTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLC-RNQRCLSSSLRCN 488
Query: 362 GKPDCSNGEDE---------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
DC +G DE C ++A +C T + A C C +G
Sbjct: 489 MFDDCGDGSDEEDCSIDPKLTSCATNASICGDEA---------RCVRTEKAAYCACRSGF 539
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+ P + C D +ECL G+C Q C NT ++CSC +
Sbjct: 540 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNF 579
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 138 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 197
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 198 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 254
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 255 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 302
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C ++ +C+A CDG DC++G DE
Sbjct: 303 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDE 332
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 177 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 236
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC DGSDEP + C Q +C + +C+P W CD + DC D
Sbjct: 237 RWKCDGEDDC-GDGSDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 289
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE+ C + CA + +CI W CD + DC+ D +DE
Sbjct: 290 NSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTP 337
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ L CD DC +G DE
Sbjct: 338 RCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 370
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 90/215 (41%), Gaps = 53/215 (24%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC-------------------------- 230
+G C + CT QF C KCIP WKCD DC
Sbjct: 52 DGRTCVSNCTASQFVCKNDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGI 111
Query: 231 -------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+D SDE N IH C Q +C + +CIP + C+ + +C
Sbjct: 112 CTNPAFICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG----- 166
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
D DE C Q QC+++K+CIP W+CD + DC VD +DE +
Sbjct: 167 DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDE----PANCTQ 217
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E RC S +C+ CDG+ DC +G DE
Sbjct: 218 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 252
>gi|443731492|gb|ELU16597.1| hypothetical protein CAPTEDRAFT_170076 [Capitella teleta]
Length = 1457
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 118/246 (47%), Gaps = 28/246 (11%)
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
D CD N +S + +C P E RC +S QC+ + CDG DC++ DEG
Sbjct: 440 DKFRLCDGTPNCQDSSDEPAECSTRICQPFEFRC-TSGQCIPQAWACDGDLDCADRSDEG 498
Query: 199 PFCNAECTPG--------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI----HQCF 246
P N +C P QF C GKCIP W CD DC D SDEP T I C
Sbjct: 499 PL-NQQCVPTKQESCDDDQFKCANGKCIPYLWYCDVDDDC-GDRSDEPGTSICYSNKSCS 556
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
+G V+C + +CIP +C+ E DC DN+DE + +C G CA + C+P
Sbjct: 557 DGWVRCQYNYRCIPGTAICNGEDDCR-----DNSDEAPTQCGKCGEGDFTCA-NGHCVPL 610
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
W+CD + DC DN+DE + + C E RC + + C++ CD + +C
Sbjct: 611 RWVCDRDDDCQ-----DNSDES-PELCATARRNCSETEFRCDNGD-CISDKYVCDRQFNC 663
Query: 367 SNGEDE 372
+G DE
Sbjct: 664 FDGSDE 669
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDG 226
+ +C + C + CDG P+C + DE C+ C P +F C G+CIP++W CDG
Sbjct: 428 GQFQCKDRSGCYDKFRLCDGTPNCQDSSDEPAECSTRICQPFEFRCTSGQCIPQAWACDG 487
Query: 227 FVDCLEDGSDEP--NTCI----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+DC + + P C+ C + Q +CA + KCIP+ W CD + DC D +
Sbjct: 488 DLDCADRSDEGPLNQQCVPTKQESCDDDQFKCA-NGKCIPYLWYCDVDDDCG-----DRS 541
Query: 281 DEDWDKF----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE C +G V+C + +CIP +C+ E DC DN+DE
Sbjct: 542 DEPGTSICYSNKSCSDGWVRCQYNYRCIPGTAICNGEDDCR-----DNSDE-----APTQ 591
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + C ++ CV L CD DC + DE P
Sbjct: 592 CGKCGEGDFTC-ANGHCVPLRWVCDRDDDCQDNSDESP 628
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 104/217 (47%), Gaps = 16/217 (7%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG-MGKCIPE 220
C ++ CG SN +CV + C+G DC+ GEDE P GQF C C +
Sbjct: 382 CSSAQMECGRSNHKCVDMFDRCNGVKDCAGGEDEAHCPAFRCARGMGQFQCKDRSGCYDK 441
Query: 221 SWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIV 277
CDG +C +D SDEP C C + +C S +CIP W CD ++DC+ +D+
Sbjct: 442 FRLCDGTPNC-QDSSDEPAECSTRICQPFEFRCT-SGQCIPQAWACDGDLDCADRSDEGP 499
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
N K C + Q +CA + KCIP+ W CD + DC D +DE N
Sbjct: 500 LNQQCVPTKQESCDDDQFKCA-NGKCIPYLWYCDVDDDCG-----DRSDEPGTSICYSNK 553
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +RC + +C+ + C+G+ DC + DE P
Sbjct: 554 S-CSDGWVRCQYNYRCIPGTAICNGEDDCRDNSDEAP 589
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 47/300 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS--HNAVLC 165
+ + GM G + ++T+ I WP+ L ID+ + ++W D+HL+ +E +DG+ H A+
Sbjct: 216 IARVGMDGRGMTKIITEGIYWPNGLTIDFVTNQIWWVDAHLDRIEFSNLDGTNRHTALSS 275
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSN---GEDE--------GPFCNAECTPGQFSCGM 214
P+ V +++ + +N G+D+ PF P +
Sbjct: 276 VPHGFSITLFETNVYWTEWNLKEVSVANKYSGKDKHNLRRLVHQPFDIHVVHPTKQPTVA 335
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPN----------------TCIHQCFNGQVQCALSK-K 257
C ++ C EP+ TC C + Q++C S K
Sbjct: 336 NPCGTDNGGCSHLCLLAPGNDTEPSFRCACPETFFMKDDQKTCWQNCSSAQMECGRSNHK 395
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN--GQVQCALSKKCIPHNWLCDEEMD 315
C+ C+ DC+ + DE +C GQ QC C LCD +
Sbjct: 396 CVDMFDRCNGVKDCAGGE-----DEAHCPAFRCARGMGQFQCKDRSGCYDKFRLCDGTPN 450
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C D++DE + + +C P E RC +S QC+ + CDG DC++ DEGP
Sbjct: 451 CQ-----DSSDEPAE----CSTRICQPFEFRC-TSGQCIPQAWACDGDLDCADRSDEGPL 500
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 139/379 (36%), Gaps = 105/379 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +RC + +C+ + C+G+ DC + DE P +C G F+C G C+P W C
Sbjct: 555 CSDGWVRCQYNYRCIPGTAICNGEDDCRDNSDEAPTQCGKCGEGDFTCANGHCVPLRWVC 614
Query: 225 DGFVDCLEDGSDEPNTCI----------------------------HQCFNGQVQCALSK 256
D DC ++ + P C CF+G + +
Sbjct: 615 DRDDDCQDNSDESPELCATARRNCSETEFRCDNGDCISDKYVCDRQFNCFDGSDETDCGE 674
Query: 257 K----------CIPHNWLCDEEMDCSTDDIVDNTD--EDWDKFHQCFNGQVQCALSKKCI 304
K CI H+ CD DC D+ D D + C + C + C+
Sbjct: 675 KSTQPYTEQVQCIAHHLHCDGIADCV--DLSDEVDCPTRYPGGKYCRDTDFTCN-NTLCV 731
Query: 305 PHNWLCDEEMDCS-----TDDIVDNTDEDWDKYFS------------------------- 334
P LC+ DC T ++ T D +F
Sbjct: 732 PLTSLCNSIQDCGDGSDETLEVCSATPCDASTHFRCLNQRCILNWMVCNDDDDCGDGSDE 791
Query: 335 --------HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------GPF 375
H C +E C +++C+ + C+ + DC GED+ G
Sbjct: 792 GDAARCSVHPPNACTGDEFHCKITDRCIGGLQVCNNRNDC--GEDDVSDELGCVKGTGQA 849
Query: 376 CN-NKADCENLKCSH----KCSPTPRGAMCFCPAGQNPNKT---QCVDADEC--LIDGSC 425
C+ ++ CE L C + K + G +C C P+ C+D DEC L+D C
Sbjct: 850 CSADRGGCEQL-CKNLPVIKDTNLTSGYICSCNDSYVPDPAAPKSCIDKDECKRLVDNKC 908
Query: 426 DQTCTNTHLSYVCSCTEGY 444
Q C NT+ ++ C C++G+
Sbjct: 909 TQECANTNGAFFCLCSDGF 927
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 43/86 (50%), Gaps = 6/86 (6%)
Query: 400 CFCPAGQ--NPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G +K C D DEC G C Q C NT SY CSC +GY DG C
Sbjct: 11 CGCPGGYAVRADKKTCSDIDECQEYPGICAQLCVNTVGSYTCSCGDGYVAESDGAICKRT 70
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNGS 482
+ D +IF + +R+++L+GS
Sbjct: 71 D---DVDPYLIFGNRYYVRKMNLDGS 93
>gi|374428823|dbj|BAL49819.1| apolipoprotein E receptor 2 [Danio rerio]
Length = 988
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 158/381 (41%), Gaps = 99/381 (25%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCG--MGKCIPESWKCDGFVDCL 231
QCV CDG+P+C +G DE C+ + C P +F CG KC+ SW+CDG DC
Sbjct: 77 GQCVPGRWRCDGEPECPDGSDEADSACSRQTCPPEKFDCGGSTSKCVSLSWRCDGERDC- 135
Query: 232 EDGSDEP------------------NTCIHQCF-----------NGQVQCALS------- 255
E+G+DE C+ F + + +C +
Sbjct: 136 ENGADEEQCAADAKACPAKEFQCRNRMCVAPTFVCDGDDDCGDRSDEEKCTAATASTCGP 195
Query: 256 -------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--------CFNGQVQCALS 300
+CIP W CD + DC D +DE ++ + C G+ +C S
Sbjct: 196 HEFRCNDSECIPTPWSCDGDPDCR-----DKSDESLERCSRRTEPQKPHCSMGEFRCR-S 249
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG------------ 348
+CI NW CD + DC D +DE + + C P++ +CG
Sbjct: 250 GECIHLNWKCDGDPDCK-----DKSDE-----ANCPVLTCRPDQFQCGDGCVNRTNKCEG 299
Query: 349 ------SSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPTPRGAM 399
S +C+ SK CD DC + DE P N+ N CSH C G
Sbjct: 300 PLKFMCKSGECIDSSKVCDTIRDCKDWSDE-PVKECGLNECAINNGGCSHICKDRQIGFE 358
Query: 400 CFCPAGQNP-NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C CP+G +K C D DEC +C Q C N Y C C EGY + P K+C AV
Sbjct: 359 CQCPSGYRLLDKKTCGDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAVG- 417
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
+ ++F++ +IRRI L
Sbjct: 418 ---KSPYLMFTNRHEIRRIDL 435
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 119/320 (37%), Gaps = 76/320 (23%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-CFNGQVQCALS-KKCIPH 261
C F+C G+C+P W+CDG +C DGSDE ++ C Q C + C S KC+
Sbjct: 67 CATTDFACKNGQCVPGRWRCDGEPEC-PDGSDEADSACSRQTCPPEKFDCGGSTSKCVSL 125
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWD----KFHQCFNG--------------------QVQC 297
+W CD E DC + D K QC N + +C
Sbjct: 126 SWRCDGERDCENGADEEQCAADAKACPAKEFQCRNRMCVAPTFVCDGDDDCGDRSDEEKC 185
Query: 298 ALS--------------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ +CIP W CD + DC D D + E + C
Sbjct: 186 TAATASTCGPHEFRCNDSECIPTPWSCDGDPDCR--DKSDESLERCSRRTEPQKPHCSMG 243
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNNKADCENLKCSHKCSPTPRGAMCF 401
E RC S +C+ L+ CDG PDC + DE P + D +C C R C
Sbjct: 244 EFRC-RSGECIHLNWKCDGDPDCKDKSDEANCPVLTCRPD--QFQCGDGC--VNRTNKCE 298
Query: 402 CPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHLSYV 437
P +C+D+ +EC I +G C C + + +
Sbjct: 299 GPLKFMCKSGECIDSSKVCDTIRDCKDWSDEPVKECGLNECAINNGGCSHICKDRQIGFE 358
Query: 438 CSCTEGYTLRPDGKSCTAVN 457
C C GY L D K+C ++
Sbjct: 359 CQCPSGYRLL-DKKTCGDID 377
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ H+N + +S + + L+++ +L P +D R
Sbjct: 494 LHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDT-ELGEPRAIAVDPRQGFM 552
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+EKAGM+G +R LV++ I+WP+ + +D + LYW DS L+ + SV ++
Sbjct: 553 YWSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHLISSVDLN 612
Query: 158 GSHNAVL 164
G + +L
Sbjct: 613 GDNRRIL 619
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 87/229 (37%), Gaps = 54/229 (23%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE---PNTCI---HQCFNGQVQCALS 255
N +C GQF C G+CIP W+CD DC ++ +E TC C NGQ
Sbjct: 25 NLDCESGQFQCRNGRCIPTPWRCDDDDDCSDNSDEENCPKKTCATTDFACKNGQ------ 78
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS-KKCIPHNWLCDEEM 314
C+P W CD E +C D D D + C + C S KC+ +W CD E
Sbjct: 79 --CVPGRWRCDGEPECP--DGSDEADSACSR-QTCPPEKFDCGGSTSKCVSLSWRCDGER 133
Query: 315 DCSTD----------------------------------DIVDNTDEDWDKYFSHNAVLC 340
DC D D +K + A C
Sbjct: 134 DCENGADEEQCAADAKACPAKEFQCRNRMCVAPTFVCDGDDDCGDRSDEEKCTAATASTC 193
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNNKADCENLKCS 388
P+E RC S +C+ CDG PDC + DE C+ + + + CS
Sbjct: 194 GPHEFRCNDS-ECIPTPWSCDGDPDCRDKSDESLERCSRRTEPQKPHCS 241
>gi|410921956|ref|XP_003974449.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Takifugu rubripes]
Length = 934
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 151/368 (41%), Gaps = 74/368 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPG------ 208
C P + CG +++CV+LS CDG+ DC NG DE P + +C G
Sbjct: 110 CPPEKFDCGGPTSKCVSLSWRCDGERDCENGADEEQCAADGKACPSTDFQCRNGKCVAPI 169
Query: 209 --------------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
+F C +CIP W CDG DC + + C
Sbjct: 170 FVCDGDDDCDDGSDEEKCSAPTCGQHEFRCNDSECIPTLWSCDGDPDCKDKSDESMERCS 229
Query: 243 H-------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
+C G+ QC S +C+ NW CD + DC D +DE C +
Sbjct: 230 RRTEPKKPRCPVGEFQCG-SGECVHMNWKCDGDADCK-----DKSDEANCPLLTCRPDEF 283
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCV 354
QC CI C++ DC D +DE N C + RC + +C+
Sbjct: 284 QCG-DGSCIHGTKQCNKVHDCP-----DYSDE----AGCVNVTKCEGLKKFRC-KNGECI 332
Query: 355 ALSKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQN-PNKT 411
S+ CD DC + DE G C N+ + N CSH C G C CPAG +K
Sbjct: 333 DSSRVCDSVKDCKDWSDEPGKECGMNECEDNNGGCSHICRDRRIGYECDCPAGYKLLDKK 392
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C D DEC +C Q C N Y C C EGY + P K+C AV + ++F++
Sbjct: 393 TCGDIDECENPDACSQICINYKGDYKCECYEGYEMDPVTKTCKAVG----KSPYLMFTNR 448
Query: 472 VDIRRIHL 479
+IRRI L
Sbjct: 449 HEIRRIDL 456
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 17/129 (13%)
Query: 51 ILNGTHTLALEFNHRNQSLCFIQQQNVS-SVRLRCAQINDLLNSWDLPAPEIFPLD---- 105
+L+ LA+++ H+N + + N S SV + +L + +L P +D
Sbjct: 513 LLHSPEGLAVDWIHKN--IYWTDSGNKSISVASGDGRKRKVLIATELSEPRAIAVDPHQG 570
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++EK+G++G +R LV+++I+WP+ + +D + LYW DS L+ + SV
Sbjct: 571 FMYWSDWGGQAKIEKSGLNGVDRQVLVSEHIEWPNGITLDLSNKRLYWVDSKLHLLSSVD 630
Query: 156 VDGSHNAVL 164
++G + VL
Sbjct: 631 LNGDNRKVL 639
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-CFNGQVQC-ALSKKCIPH 261
C F+C G+C+P W+CDG +C DGSDE + C Q C + C + KC+
Sbjct: 69 CATTDFTCKNGQCVPARWRCDGEPECA-DGSDEADAICSRQTCPPEKFDCGGPTSKCVSL 127
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDK----FHQCFNGQVQCAL------------------ 299
+W CD E DC + D QC NG+ +
Sbjct: 128 SWRCDGERDCENGADEEQCAADGKACPSTDFQCRNGKCVAPIFVCDGDDDCDDGSDEEKC 187
Query: 300 -------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+CIP W CD + DC D D + E + C E +
Sbjct: 188 SAPTCGQHEFRCNDSECIPTLWSCDGDPDCK--DKSDESMERCSRRTEPKKPRCPVGEFQ 245
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEG 373
CG S +CV ++ CDG DC + DE
Sbjct: 246 CG-SGECVHMNWKCDGDADCKDKSDEA 271
>gi|426246014|ref|XP_004016793.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 4 [Ovis aries]
Length = 1904
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/337 (31%), Positives = 152/337 (45%), Gaps = 49/337 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 141 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPAPPCNLE----EFQCAYGR 195
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C+ + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 196 CVLDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 250
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ S
Sbjct: 251 --DQSDERNCTTSVCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCEST 300
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
+ C ++ C + +C+ K C+G DC + DE P N + C+ P
Sbjct: 301 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGGENCNVNNGGCP 359
Query: 396 RGAMCFCPAGQ-NPNK--------------TQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
R G+ P+ + D +EC +G C Q CTN+ ++ C C
Sbjct: 360 RQWQMVGGGGEWGPHHGDRLEDGRTKICPCSVVTDVNECAEEGYCSQGCTNSEGAFQCWC 419
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
GY LRPD +SC A+ EP ++F++ +DIR++
Sbjct: 420 EAGYELRPDRRSCKALG---PEPV-LLFANRIDIRQV 452
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 70/151 (46%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 37 CIPAQWQCDGDNDCGDHSDEDGCKLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 95
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 96 QDCPPRVXGVSEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 148
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 149 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 173
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 882 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 939
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1419 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1475
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1476 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1535
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES + G VL HP L
Sbjct: 1536 DRIESADLSGKLRQVLVSHVSHPFAL 1561
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1190 KLERSGMDGSDRTVLINSNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1249
Query: 167 P 167
P
Sbjct: 1250 P 1250
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 489 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 548
Query: 166 HPN 168
N
Sbjct: 549 WQN 551
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 577 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 634
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1408 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1464
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 796 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 855
Query: 168 N 168
N
Sbjct: 856 N 856
>gi|312099046|ref|XP_003149238.1| hypothetical protein LOAG_13684 [Loa loa]
Length = 412
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 99/200 (49%), Gaps = 22/200 (11%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKC 303
CF Q +CA +CI +W+CD DCS D +DE +F QC G+ QC +K+C
Sbjct: 10 CFQYQFRCADQSQCIQKSWVCDGSSDCS-----DGSDEPPTCEFKQCSGGEFQCK-NKRC 63
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
P + CD DC DN+DE+ LC P + C S C+ +K CDGK
Sbjct: 64 QPRKFRCDYYDDCG-----DNSDEE-----GCGQYLCPPQQWNCPGSGHCIHKTKLCDGK 113
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK---TQCVDADECL 420
DCS+G DE +N C +L C C +P G +C CP G ++ C D +EC+
Sbjct: 114 NDCSDGADEKNCSSNL--CPSLGCQAGCHSSPSGGVCTCPVGYKLDERFHRTCSDINECV 171
Query: 421 IDGSCDQTCTNTHLSYVCSC 440
G CDQ C N + CSC
Sbjct: 172 EWGYCDQGCQNHRPGFTCSC 191
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCI 218
HN C + RC +QC+ S CDG DCS+G DE P C +C+ G+F C +C
Sbjct: 5 HNHTACFQYQFRCADQSQCIQKSWVCDGSSDCSDGSDEPPTCEFKQCSGGEFQCKNKRCQ 64
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
P ++CD + DC D SDE + C Q C S CI LCD + DCS
Sbjct: 65 PRKFRCDYYDDC-GDNSDEEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDCS 117
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA------DCENLKC 387
HN C + RC +QC+ S CDG DCS+G DE P C K C+N +C
Sbjct: 5 HNHTACFQYQFRCADQSQCIQKSWVCDGSSDCSDGSDEPPTCEFKQCSGGEFQCKNKRC 63
>gi|194380684|dbj|BAG58495.1| unnamed protein product [Homo sapiens]
Length = 739
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 133/299 (44%), Gaps = 36/299 (12%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC----IHQ-----CFN 247
G C +F C CIP+ W CD DC EDGSDE P C + Q C
Sbjct: 20 GTAVGDRCERNEFQCNSSTCIPQLWACDNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSA 78
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ C LS +CI +W CD DC D +DE+ C + QC+ CI +
Sbjct: 79 FEFHC-LSGECIHSSWRCDGGPDCK-----DKSDEENCAVATCRPDEFQCS-DGNCIHGS 131
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDC 366
CD E DC D +DE N LC PN+ +C S +C+ L K C+ DC
Sbjct: 132 RQCDREYDCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDC 181
Query: 367 SNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDG 423
+ DE +C N CSH C+ G C CP G Q + +C D DEC
Sbjct: 182 RDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD 241
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C Q C N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 242 TCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 415 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 466
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 467 IDVNGGNRKTILEDEKRLAHPFSL 490
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S +C+ S CDG PDC + DE A C P +F C G CI S +C
Sbjct: 76 CSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQC 134
Query: 225 DGFVDCLEDGSDE 237
D DC +D SDE
Sbjct: 135 DREYDC-KDMSDE 146
>gi|195551463|ref|XP_002076234.1| GD15368 [Drosophila simulans]
gi|194201883|gb|EDX15459.1| GD15368 [Drosophila simulans]
Length = 1857
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 154/343 (44%), Gaps = 48/343 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIP 219
C+ NE C S +C+ L+ DG DC +D E F ++C +F C G+C
Sbjct: 779 CNSNEFTCQKSGRCIQLTWVNDGVVDCGPDDDSDETSETIFA-SKCP--EFDCNNGRCRQ 835
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CDG +C + +DE C +C +G+ C C +CD DC VD
Sbjct: 836 FADVCDGIDNC-GNNADEME-CEQECEHGEKYCR-PIGCYGEMHMCDGIHDC-----VDF 887
Query: 280 TDE--------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE W + +C + C +CIP CD C D T
Sbjct: 888 SDEANCNQTKSDNHPVTGWKELGECAPLEFACMDPFECIPDFLRCDGIPHC-----FDKT 942
Query: 326 DE------DWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
DE + ++ + V+C HP+ L CG + QCV + + CDGK DC + DEG C +
Sbjct: 943 DEFNCTHINTSRFDMNETVICEHPDRL-CGFTKQCVTVDQLCDGKNDCEDTTDEGFLCAD 1001
Query: 379 KADCENLKCSHKCSPTPRGAMCFCP--AGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
K +CSH+C TP G +C CP PN +C C +C Q C ++ Y
Sbjct: 1002 KLCDRGHECSHRCHNTPEGYICSCPDHLYLQPNGKRCSMQHACDHWDTCSQVCESSGKGY 1061
Query: 437 VCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C +G+ L D +C + DEP +IF++ DI+ I+L
Sbjct: 1062 DCRCLDGFDLGFDRFTCKS--TAPDEPY-VIFTNRQDIKGINL 1101
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 107 RLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+A M G+ R + T + WP+ L +DY Q +YW D+ +++ S DGS + V
Sbjct: 1231 RIERASMSGDGRRMISTSWQLSAGWPNGLTLDYTQKRVYWVDAKSDSISSTMYDGSEHHV 1290
Query: 164 LCHPNEL 170
+ E+
Sbjct: 1291 VLRNKEI 1297
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 108 LEKAGMHGENRSPLVTKN----IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ A M G ++ L +QWP SL +D LYWCD L+T+E +++DG+ V
Sbjct: 516 IYSAWMDGTHKELLAKGTSAMPMQWPRSLDVDRRTKELYWCDIRLSTIELMKLDGTGREV 575
Query: 164 LCHPNELRCGSSNQCVALSKFCDGK 188
L ++ S Q L + D K
Sbjct: 576 LFKSDQFHPYSIVQNNGLIYWADNK 600
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+H+NT R D + + HP+ L CG + QCV + + CDGK DC + DEG C
Sbjct: 948 THINTS---RFDMNETVICEHPDRL-CGFTKQCVTVDQLCDGKNDCEDTTDEGFLC 999
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
L ++ + G NR+ LVT + PSS+ +D +++YW D + + V V +G + L P
Sbjct: 181 LSRSLLDGSNRTVLVTDQVYHPSSVTLDLANELVYWIDIYKDEVNRVDYEGRNRWTLKRP 240
>gi|350594534|ref|XP_003134230.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Sus scrofa]
Length = 1108
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 142/312 (45%), Gaps = 36/312 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT--PGQFSCGMGKCIPESWKCD 225
+ CG C+ ++ C+G+ +C +G DE C C P + C G+CI SW CD
Sbjct: 34 RQAACGGVPVCIPVAWLCNGEQECPDGADEQ--CEELCRGHPQAWQCDDGRCIAISWLCD 91
Query: 226 GFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNW-LCDEEMDCSTDDIVDNTDED 283
G DC DGSDE + + C + ++QC +C P W LCD + DC E
Sbjct: 92 GVGDC-SDGSDEVDCERLAACPDRKIQCPGDPQC-PDAWELCDGDKDCE-----GGFGEA 144
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
++C GQ QC +K C+P +W CD D D++DE+ C
Sbjct: 145 RCPHNRCLTGQWQCR-NKVCVPDSWRCD-----GVDHCGDSSDEE-------VCASCPEG 191
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCP 403
++C +C+ S CDG+ DC++G DE C + C +C T G C C
Sbjct: 192 TVKC-DEGKCILESLMCDGEADCTDGTDEPTTCGKNCSLASGGCEGQCRDTDWGVQCSCG 250
Query: 404 AGQNPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
AG + + D DEC + S C Q C NT S+ C C +GY L +G C D+
Sbjct: 251 AGW---RLEPDDVDECSMAYSPCGQLCHNTPGSFSCGCVQGYQLH-NGTDCRVT----DD 302
Query: 463 PASIIFSSTVDI 474
II ++ ++
Sbjct: 303 AVKIIIAADREL 314
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 101/214 (47%), Gaps = 23/214 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMG-KCI 218
+LC + + C +CV+ CDGK DC +G DE FCN PG F C G KCI
Sbjct: 878 LLCTRSSVPCRDGQECVSREYLCDGKRDCEDGSDEENCSYFCN---KPGIFQCLDGNKCI 934
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ CDG CL DGSDE + C + + C S +C+P +WLCD + DCS D
Sbjct: 935 EVKYHCDGTPQCL-DGSDELD-CWKPVEDCSLHCDNSSRCVPKSWLCDGKPDCS-----D 987
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DE +C + +C + +C+ + CD DC +D +DE+ +
Sbjct: 988 KKDEQGCIHEKCSASEFKCE-NGQCVSSSLRCDGNRDC-----LDYSDEE---GCPARPL 1038
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E+ C S +CV CD DC +G DE
Sbjct: 1039 PCPSGEVLCPRSRECVLAEWICDHDLDCKDGSDE 1072
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 156 VDGSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
+DGS P E L C +S++CV S CDGKPDCS+ +DE + +C+ +F C
Sbjct: 947 LDGSDELDCWKPVEDCSLHCDNSSRCVPKSWLCDGKPDCSDKKDEQGCIHEKCSASEFKC 1006
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ S +CDG DCL D SDE C +G+V C S++C+ W+CD ++D
Sbjct: 1007 ENGQCVSSSLRCDGNRDCL-DYSDEEGCPARPLPCPSGEVLCPRSRECVLAEWICDHDLD 1065
Query: 271 C 271
C
Sbjct: 1066 C 1066
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 58/118 (49%), Gaps = 9/118 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++C QC + CDG DC G E + C GQ+ C C+P+SW+C
Sbjct: 111 CPDRKIQCPGDPQCPDAWELCDGDKDCEGGFGEARCPHNRCLTGQWQCRNKVCVPDSWRC 170
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DG VD D SDE C C G V+C KCI + +CD E DC+ D TDE
Sbjct: 171 DG-VDHCGDSSDE-EVCA-SCPEGTVKCD-EGKCILESLMCDGEADCT-----DGTDE 219
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 63/148 (42%), Gaps = 26/148 (17%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C V C ++C+ +LCD + DC D +DE+ + G QC KCI
Sbjct: 880 CTRSSVPCRDGQECVSREYLCDGKRDCE-----DGSDEENCSYFCNKPGIFQCLDGNKCI 934
Query: 305 PHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPNE---LRCGSSNQCVALSKF 359
+ CD C +D +DE W P E L C +S++CV S
Sbjct: 935 EVKYHCDGTPQC-----LDGSDELDCW-----------KPVEDCSLHCDNSSRCVPKSWL 978
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKC 387
CDGKPDCS+ +DE + K KC
Sbjct: 979 CDGKPDCSDKKDEQGCIHEKCSASEFKC 1006
>gi|268530602|ref|XP_002630427.1| Hypothetical protein CBG11153 [Caenorhabditis briggsae]
Length = 909
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 149/360 (41%), Gaps = 91/360 (25%)
Query: 163 VLCHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMG 215
V CH N+ +C G + C+ + CDG+ DC+NG+DE C A+ C F C G
Sbjct: 118 VSCHENQFQCEELTGDYSLCIPKTWVCDGQRDCTNGKDELN-CTAKAQKCPDNNFQCNNG 176
Query: 216 KCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
CI ++W CDG DC DGSDE N ++QC G++ S +CIP W CD E
Sbjct: 177 NCIFKNWVCDGEEDC-SDGSDELLTGPSHCNASVNQCPPGEMWKCGSGECIPLRWKCDSE 235
Query: 269 MDCSTDDIVDNTDED--WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DC D++DE H C + C KCI +++CD E DCS D+
Sbjct: 236 VDCK-----DHSDERNCSSVQHTCKLAEEFACKTVNKCISKSFVCDGEFDCSDGTDEDDC 290
Query: 326 DE--------DWD---KYFSHNA----VLCHPNELRCGSSN------------------- 351
D+ +W + ++ A VLC P LRC
Sbjct: 291 DDQRKECKKGEWTCPATFGAYGAESGLVLCIPETLRCNGEEDCPDGGDEKNCSAEKPETC 350
Query: 352 -------------QCVALSKFC-DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG 397
QC+ ++K C + + DC +G N + C+ K C G
Sbjct: 351 KEGTEFTCPSTPLQCLEMTKLCTNSRFDCGDG--------NMSVCDQQKLIGLCKAGSDG 402
Query: 398 AMC-----------FCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
+C C G QC+D EC G CDQ C NT SY C+C GY L
Sbjct: 403 CICRKSYVKGNDVCHCKEGYKLGNGQCIDIVECETPGVCDQICLNTPGSYRCACHAGYQL 462
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 108/244 (44%), Gaps = 30/244 (12%)
Query: 146 SHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC 205
S + ++ V V C + +C N+C+ +S CDG DC N EDE C C
Sbjct: 14 SLVTILDGVVVRLGEPTKACKADSFKC-EDNRCIPMSWRCDGDIDCQNEEDEKN-CPKTC 71
Query: 206 TPGQFSCG----------MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC--- 252
+ CG KCIPE+W CDG DC ED SDE C Q QC
Sbjct: 72 GEKEHKCGNVTSARSSLQRFKCIPEAWLCDGEFDC-EDKSDEFQCKNVSCHENQFQCEEL 130
Query: 253 -ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
CIP W+CD + DC+ N K +C + QC + CI NW+CD
Sbjct: 131 TGDYSLCIPKTWVCDGQRDCTNGKDELNCTA---KAQKCPDNNFQCN-NGNCIFKNWVCD 186
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNEL-RCGSSNQCVALSKFCDGKPDCSN 368
E DCS D +DE NA + C P E+ +CG S +C+ L CD + DC +
Sbjct: 187 GEEDCS-----DGSDELLTGPSHCNASVNQCPPGEMWKCG-SGECIPLRWKCDSEVDCKD 240
Query: 369 GEDE 372
DE
Sbjct: 241 HSDE 244
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 18/200 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMGKCIPESWKCDGFVDCL 231
+C+ + CDG+ DC + DE N C QF C CIP++W CDG DC
Sbjct: 92 KCIPEAWLCDGEFDCEDKSDEFQCKNVSCHENQFQCEELTGDYSLCIPKTWVCDGQRDCT 151
Query: 232 EDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDEDWDKF 287
+G DE N +C + QC + CI NW+CD E DCS +D+++
Sbjct: 152 -NGKDELNCTAKAQKCPDNNFQCN-NGNCIFKNWVCDGEEDCSDGSDELLTGPSHCNASV 209
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+QC G++ S +CIP W CD E+DC D++DE H L E C
Sbjct: 210 NQCPPGEMWKCGSGECIPLRWKCDSEVDCK-----DHSDERNCSSVQHTCKL--AEEFAC 262
Query: 348 GSSNQCVALSKFCDGKPDCS 367
+ N+C++ S CDG+ DCS
Sbjct: 263 KTVNKCISKSFVCDGEFDCS 282
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 33/169 (19%)
Query: 29 MDCSTDDIVDNT--DEDWDKYFKRILNG--THT---LALEFNHRNQSLCF-----IQQQN 76
+ C+ ++ D+ E DK + IL+G HT LA+++ H L F + Q N
Sbjct: 538 LSCTIGNVTDSYLGTEMCDKKHEVILDGEKIHTPDGLAVDWIH---DLLFWTDGGLDQIN 594
Query: 77 VSSVRLRCAQINDLLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLV 122
V ++ R ++ L S DL P +D R+E++GM G+NR +
Sbjct: 595 VLDMKTRKQRV---LFSNDLEEPRAIAVDPEVGLIFWTDWGKNARIERSGMDGQNRVVIA 651
Query: 123 -TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
+ WP+ L +DY +YW D+ + ++ S G + H ++
Sbjct: 652 DGHRVIWPNGLALDYVDKRVYWADAKIKSIFSCDYWGKDVKTVLHSHQF 700
>gi|380797303|gb|AFE70527.1| low-density lipoprotein receptor-related protein 1B precursor,
partial [Macaca mulatta]
Length = 1696
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/370 (28%), Positives = 149/370 (40%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 629 FWCDGDFDCADGS--DERNCEISCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 685
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 686 PASPTCSSSEYICASGGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 743
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H+W+CD E
Sbjct: 744 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHSWVCDGE 793
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 794 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCTGKLT 853
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 854 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 912
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A+C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 913 ANCNQIKTS---------VFCRCKPGFQRNMKHRQCEDLNECLVFGTCSHQCINVEGSYK 963
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 964 CVCDQNFQER 973
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 102/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 414 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 472
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 473 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 526
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 527 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 576
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 577 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 604
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCI 259
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC +
Sbjct: 410 CLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCAL 468
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 469 PA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-- 520
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 521 ------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 566
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/203 (35%), Positives = 98/203 (48%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CIP WKCDG DC +
Sbjct: 620 ANGDCVSSRFWCDGDFDCADGSDERN-CEISCSKDQFQCSNGQCIPAKWKCDGHEDC-KY 677
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE + C + + CA S CI + C+ E DC+ D +DE D +C
Sbjct: 678 GEDEKSCEPASPTCSSSEYICA-SGGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 730
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE+ +C +E C +S
Sbjct: 731 EDQFRCKNKAHCIPIRWLCDGIHDC-----VDGSDEE---NCDRGGNICRADEFLCNNS- 781
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C S CDG+ DC + DE P
Sbjct: 782 LCKLHSWVCDGEDDCGDNSDEAP 804
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 492 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 551
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 552 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 604
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + + C
Sbjct: 605 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEISCSK 652
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 653 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 681
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 454 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 512
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 513 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 566
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 567 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTLK 615
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 616 DFLCANGD-CVSSRFWCDGDFDCADGSDE 643
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 107/236 (45%), Gaps = 19/236 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 533 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 592
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 593 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDERN 645
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CIP W CD DC ED +K + C +E
Sbjct: 646 CEI-SCSKDQFQCS-NGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 695
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
C S C++ S C+G+ DC++G DE C + + +C +K P +C
Sbjct: 696 YICASGG-CISASLKCNGEYDCADGSDEMD-CVTECKEDQFRCKNKAHCIPIRWLC 749
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 66/134 (49%), Gaps = 9/134 (6%)
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNPN 409
+ C+ K DC +G DE N+ + + CS C P C C G ++
Sbjct: 1 IPSGGLCNNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPISYKCKCWPGFQLKDDG 60
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIF 468
KT CVD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I
Sbjct: 61 KT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS---DEEPFLIL 116
Query: 469 SSTVDIRRIHLNGS 482
+ +IR+I +GS
Sbjct: 117 ADHHEIRKISTDGS 130
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 1149 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSIVSVSS 1208
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 1209 KQGLLHPHRI 1218
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 80/334 (23%), Positives = 124/334 (37%), Gaps = 52/334 (15%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER-------- 107
+ LA+++ +N +++ + +L +L S L P LD R
Sbjct: 187 NALAVDWIGKNLYWSDTEKRIIEVSKLN-GLYPTILVSKRLKFPRDLSLDPRAGYLYWID 245
Query: 108 ------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGS
Sbjct: 246 CCEYPHIGRVGMDGTNQSVVIETKISRPMALTIDYVNHRLYWADE--NHIEFSNMDGSRR 303
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
+ PN+ G +AL+ F D ++G+ + A T G + S
Sbjct: 304 HKV--PNQDIPGV----IALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----INS 351
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVD 278
W + + +P+ H C C+ L H C + D+
Sbjct: 352 WHAITDIQ-VYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT- 409
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C Q +C + KCIP W CD + DD D +DE D
Sbjct: 410 -------CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEF 452
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P +CG+ C + CDG+ DC + DE
Sbjct: 453 KCQPGRFQCGTG-LCALPAFICDGENDCGDNSDE 485
>gi|449266599|gb|EMC77641.1| Low-density lipoprotein receptor-related protein 2, partial
[Columba livia]
Length = 670
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/316 (32%), Positives = 135/316 (42%), Gaps = 48/316 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + +C + C+ C+G DC + DE C A C PG C GKCI ES C
Sbjct: 85 CLPGQWQC-RNRVCIMADWKCNGIDDCGDSSDED-VC-APCPPGMERCDEGKCILESLMC 141
Query: 225 DGFVDCLEDGSDEPNTC----------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+ DCL DG+DEP+TC +H C + Q +K P + +
Sbjct: 142 NDEDDCL-DGTDEPSTCGELHTAARHYLHGCASTTTQSLPAKTTAPQLTTTTQHPNSPAR 200
Query: 275 DIVDNTDEDWDKFH--------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ H C V C +C+ ++CD E DC VD +D
Sbjct: 201 VVPPTLPLPSGPAHPLTPVLHLSCPRTHVPCHDGTECVAQEYVCDGEKDC-----VDGSD 255
Query: 327 EDW-----DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
ED D SH E CG C+ S CDG+ DC++G DEG C+
Sbjct: 256 EDGCAQLCDTPGSH--------EYPCGLGT-CLNASLVCDGRQDCADGSDEGENCS--VP 304
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADEC--LIDGSCDQTCTNTHLSYV 437
C+ C+ C P+P+G C+C G + C+D DEC L +G C Q C N SY
Sbjct: 305 CQR-SCARLCYPSPKGPRCWCDQGYQLAEDGLSCMDIDECTELGEGVCSQMCLNAPGSYS 363
Query: 438 CSCTEGYTLRPDGKSC 453
C C GY L PDG C
Sbjct: 364 CGCLPGYLLEPDGHVC 379
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-----AECTPGQFSC-GMGKCIPES 221
++ CG++ C+ + CDG+ C +G DE C A C + C G CIP
Sbjct: 5 HQATCGAA--CIPVPWLCDGEQQCPDGMDEQCGCKCCSVPAVCGAKKVQCPGTHHCIPHW 62
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC EDG DE C GQ QC ++ CI +W C+ DD D++D
Sbjct: 63 ELCDRHQDC-EDGWDEEGCPQQPCLPGQWQCR-NRVCIMADWKCN-----GIDDCGDSSD 115
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E D C G +C KCI + +C++E DD +D TDE
Sbjct: 116 E--DVCAPCPPGMERCD-EGKCILESLMCNDE-----DDCLDGTDE 153
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
RL +A M G R L+ + + WP++L +D ++W D L +V S R+DG+ VL
Sbjct: 529 RLMEATMDGSRRHVLLAQELGWPTALALDLPTRRIFWLDEKLGSVGSARLDGTSVKVL 586
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 49/127 (38%), Gaps = 21/127 (16%)
Query: 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-----DKFHQCFNGQVQCALSKKCIP 305
Q CIP WLCD E C D DE C +VQC + CIP
Sbjct: 6 QATCGAACIPVPWLCDGEQQCP-----DGMDEQCGCKCCSVPAVCGAKKVQCPGTHHCIP 60
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
H LCD DC ++ WD+ C P + +C + C+ C+G D
Sbjct: 61 HWELCDRHQDC---------EDGWDEEGCPQQP-CLPGQWQC-RNRVCIMADWKCNGIDD 109
Query: 366 CSNGEDE 372
C + DE
Sbjct: 110 CGDSSDE 116
>gi|392333720|ref|XP_003752978.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Rattus norvegicus]
gi|392354021|ref|XP_003751657.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Rattus norvegicus]
Length = 1033
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 126/291 (43%), Gaps = 34/291 (11%)
Query: 168 NELRCGSSNQ------CVALSKFCDGKPDCSNGEDEGPFCNAECT--PGQFSCGMGKCIP 219
EL C + Q C+ ++ C+G+ +C +G DE C C + C GKCIP
Sbjct: 140 GELECNRTRQVACGEKCIPIAWLCNGEQECPDGSDEQ--CEQTCLGHAQAWQCDNGKCIP 197
Query: 220 ESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
SW CDG DC+ DGSDE N + C + ++ C C+ CD +C D
Sbjct: 198 ASWLCDGASDCV-DGSDELNCESLTVCPDYKIYCPGKALCLDAGEHCDAHQNCE-----D 251
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ + +C GQ QC ++ C+ +W CD D D +DE
Sbjct: 252 GSLKAHCPHARCLPGQWQCR-NRACVMDSWRCD-----GIDHCGDASDE-------QGCA 298
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C + C +C+ S CDG+ DC +G DE C N C CS T G
Sbjct: 299 SCPEGTVSC-DGGKCIPESLMCDGRSDCMDGADEPETCGKNCSLLNGGCEGPCSDTHWGV 357
Query: 399 MCFCPAGQN--PNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C C G P+ +C D DEC L G C Q C NT SY C C +G+ L
Sbjct: 358 RCSCTPGWRLQPDGQRCEDVDECSLAYGPCGQLCHNTAGSYSCGCIQGHQL 408
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PF------CNAECTPGQFSCGMGK 216
LRC + +C+ S CDGKPDC + DE P + +C+ +F C G+
Sbjct: 895 LRCDNKTRCIPKSWRCDGKPDCLDRRDEQGCRKFHEPLKTKMYAFHEKCSSTEFQCESGQ 954
Query: 217 CIPESWKCDGFVDCLEDGSDE--PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
C+ S CDG DCL+ +E P + QC G+++C S +C+ W+CD ++DC
Sbjct: 955 CVSSSLHCDGNRDCLDHSDEEGCPVSWSLQCPEGEMKCPKSGECVLAEWICDHDVDCE-- 1012
Query: 275 DIVDNTDEDWDKF 287
D DE F
Sbjct: 1013 ---DGADEKVAYF 1022
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 43/191 (22%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCIPE 220
P +C + C+ CDG CS+G DE C+ C +CIP+
Sbjct: 853 PGVFQCLDGSGCIEERYHCDGAEHCSDGSDELGCWRPADDCSLRCD------NKTRCIPK 906
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ------------CFNGQVQCALSKKCIPHNWLCDEE 268
SW+CDG DCL+ ++ H+ C + + QC S +C+ + CD
Sbjct: 907 SWRCDGKPDCLDRRDEQGCRKFHEPLKTKMYAFHEKCSSTEFQCE-SGQCVSSSLHCDGN 965
Query: 269 MDCSTDDIVDNTDED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
DC +D++DE+ W QC G+++C S +C+ W+CD ++DC D
Sbjct: 966 RDC-----LDHSDEEGCPVSWSL--QCPEGEMKCPKSGECVLAEWICDHDVDCE-----D 1013
Query: 324 NTDEDWDKYFS 334
DE YFS
Sbjct: 1014 GADEK-VAYFS 1023
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 83/186 (44%), Gaps = 39/186 (20%)
Query: 206 TPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
PG F C G CI E + CDG C DGSDE C + ++C +CIP +W
Sbjct: 852 VPGVFQCLDGSGCIEERYHCDGAEHC-SDGSDELG-CWRPADDCSLRCDNKTRCIPKSWR 909
Query: 265 CDEEMDCSTDDIVDNTDEDW-DKFHQ------------CFNGQVQCALSKKCIPHNWLCD 311
CD + DC +D DE KFH+ C + + QC S +C+ + CD
Sbjct: 910 CDGKPDC-----LDRRDEQGCRKFHEPLKTKMYAFHEKCSSTEFQCE-SGQCVSSSLHCD 963
Query: 312 EEMDCSTDDIVDNTDED-----WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
DC +D++DE+ W ++ C E++C S +CV CD DC
Sbjct: 964 GNRDC-----LDHSDEEGCPVSW-------SLQCPEGEMKCPKSGECVLAEWICDHDVDC 1011
Query: 367 SNGEDE 372
+G DE
Sbjct: 1012 EDGADE 1017
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 156 VDGS-----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
VDGS + +C ++ C C+ + CD +C +G + +A C PGQ+
Sbjct: 209 VDGSDELNCESLTVCPDYKIYCPGKALCLDAGEHCDAHQNCEDGSLKAHCPHARCLPGQW 268
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C C+ +SW+CDG C D SDE C G V C KCIP + +CD D
Sbjct: 269 QCRNRACVMDSWRCDGIDHC-GDASDEQGCA--SCPEGTVSCD-GGKCIPESLMCDGRSD 324
Query: 271 CSTDDIVDNTDE 282
C +D DE
Sbjct: 325 C-----MDGADE 331
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E AGM G +R L + P L +D+ LYW + ++E+V VDG
Sbjct: 557 IEAAGMDGSDRKMLAVVTTEEPLGLTLDHVTGRLYWISGYKESIETVNVDG 607
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFC-NAECTPGQFSC-GMGKCIPE 220
C E +C S QCV+ S CDG DC + DE P + +C G+ C G+C+
Sbjct: 943 CSSTEFQC-ESGQCVSSSLHCDGNRDCLDHSDEEGCPVSWSLQCPEGEMKCPKSGECVLA 1001
Query: 221 SWKCDGFVDCLEDGSDE 237
W CD VDC EDG+DE
Sbjct: 1002 EWICDHDVDC-EDGADE 1017
>gi|390337147|ref|XP_782026.3| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Strongylocentrotus purpuratus]
Length = 1834
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/350 (30%), Positives = 145/350 (41%), Gaps = 54/350 (15%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG---------QFSC 212
C + + C S +C+ KFCDG+ DC++ DE AECT G F C
Sbjct: 107 TTACPSSFVSCVSDKKCIPGDKFCDGQNDCADRTDEP----AECTDGTSTWQCPDLHFKC 162
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSK----KCIPHNWLCDE 267
+CI + CDG DC DGSDE C H C +G C + + +CIP N +CD
Sbjct: 163 NNSRCISDLKVCDGVDDCT-DGSDESMDCSDHVCRSGYFTCPVKRFNGERCIPTNQVCDG 221
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STD--DIVD 323
C + D+ C + CA + CI + CD DC S+D D D
Sbjct: 222 VAQCEYAEDEDDDTCMGTNDIPCSGNEFTCA-NDLCILMMYECDHYNDCGDSSDEHDACD 280
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSN------------------------QCVALSKF 359
+ F +C RC +N QCVA+S+
Sbjct: 281 YPECSTVTQFKCGNGVCVSVSQRCDGNNDCRDGSDESDCPSCNDNQFTCENGQCVAISQV 340
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDAD 417
CDG C +G DE FC N CS C T C C G ++ C+D D
Sbjct: 341 CDGSVHCEDGSDE-RFCGIDECMMNRPCSDTCVDTLTSFKCMCNKGFVLASDRVTCIDFD 399
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
EC + C Q C NT SY+CSCT GY L+ +G + + ++P +I
Sbjct: 400 ECTMTPICSQVCVNTPGSYICSCTTGYQLQSNG---SCMRTTGEDPTVLI 446
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 132/294 (44%), Gaps = 32/294 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RCG+ +C+ K CDG DC G DE + C G +C G CI + C
Sbjct: 1001 CSESEFRCGNE-RCIQGRKVCDGTVDCPGGLDEDDCNDVNCPNGYRACAFGTCINATLFC 1059
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+G +C DGSDE T C G+ +C + +CIP + CD +C D +DE
Sbjct: 1060 NGIRNCF-DGSDESGCATTNPGCEIGEFRCT-NNRCIPEEFKCDGGNECG-----DGSDE 1112
Query: 283 DWDK--FHQCFNGQ---VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+ QC + +C S CI + LCD +C D+ D +
Sbjct: 1113 SREACLTSQCDTSEGERFRCPSSGLCIWVDQLCDGYNNCGDSDLSDEQ--------RCST 1164
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTP 395
C + RC S CV S C+G DC++ DE C+ +A C N C H C+P
Sbjct: 1165 TACTADSFRC-SGGDCVPFSALCNGNNDCTDNYDE-LGCDKEATCSVNNGDCEHICTPIS 1222
Query: 396 RGAMCFCPAGQN----PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
C Q + CVD +ECL C QTC+N+ ++ CSC+EGYT
Sbjct: 1223 SAGAILCQCRQGYVLAEDGHNCVDVNECL-GFDCIQTCSNSKGTFRCSCSEGYT 1275
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 83/173 (47%), Gaps = 16/173 (9%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCI 259
N C G FSC G C+P++W CD DC D SDEP+ +Q C G CA S +CI
Sbjct: 874 NRTCEVGYFSCANGFCVPDAWVCDLDNDC-GDMSDEPSHLCYQSTCAPGWFSCADSYRCI 932
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P C+ +DC +D D+ +E + G +C + KCIP W CD DC
Sbjct: 933 PSYVRCNGFLDCRGED--DSDEEGCPEVTCDPIGDFRCD-NHKCIPKRWECDFNNDCG-- 987
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE Y C +E RCG+ +C+ K CDG DC G DE
Sbjct: 988 ---DRSDE----YEGCVYRDCSESEFRCGNE-RCIQGRKVCDGTVDCPGGLDE 1032
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 104/242 (42%), Gaps = 29/242 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSC-GMGKCIPES 221
C + C + C+ C+G DCS+GEDE E C P F C G +CIP
Sbjct: 750 CSDRQFHCSADADCIPWYYECNGYNDCSDGEDERDCGQVERVCDPSVFQCDGNDRCIPIP 809
Query: 222 WKCDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC + SDE + + C + + +C S KCIP +CD + DC D +
Sbjct: 810 WLCDGDNDCQDATISDESHCSTNVCEDWEFKCN-SGKCIPRREVCDRDDDCPDGDDEEEV 868
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
C G CA + C+P W+CD + DC D +DE + C
Sbjct: 869 MCTHPN-RTCEVGYFSCA-NGFCVPDAWVCDLDNDCG-----DMSDEPSHLCYQST---C 918
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC---------SHKC 391
P C S +C+ C+G DC GED+ +++ C + C +HKC
Sbjct: 919 APGWFSCADSYRCIPSYVRCNGFLDC-RGEDD----SDEEGCPEVTCDPIGDFRCDNHKC 973
Query: 392 SP 393
P
Sbjct: 974 IP 975
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
L + + GM G N + +NI WP+ + +DY D +YW D+HL+ + ++G++
Sbjct: 579 LRAYIGRMGMDGTNPIEIHNENIAWPNGITVDYTADRIYWTDAHLDHISFADLEGNN 635
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ A M+GEN ++T + P L +D+ N D ++W D LN ++ + DGS+ L
Sbjct: 1449 IAMAYMNGENSEKVITDGLIQPRGLTVDFSNDDRVFWVDFKLNILQGMLFDGSNRKTL 1506
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC-STDDIVDNTDED--WDKFHQCFNGQVQCALS 300
+C + Q +C +S+ CI + CD DC DD + + + C Q +
Sbjct: 24 ECDSMQYECVMSRTCIESSRRCDGVADCPGADDELSCSIRTPCRADYEHCPGLQ-----N 78
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
CI +W CD S DD DN+DED + + C + + C S +C+ KFC
Sbjct: 79 NLCIDPSWRCD-----SKDDCEDNSDEDANFCAT---TACPSSFVSCVSDKKCIPGDKFC 130
Query: 361 DGKPDCSNGEDEGPFCNN 378
DG+ DC++ DE C +
Sbjct: 131 DGQNDCADRTDEPAECTD 148
>gi|47230767|emb|CAF99960.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1782
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/286 (33%), Positives = 142/286 (49%), Gaps = 32/286 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
A C+ +F C G+CI + + CD D D SDE + HQ C + + C+ S CI
Sbjct: 3 ATCSVEEFQCAYGRCILDIYHCD-GDDDCGDWSDESDCSSHQPCRSVEFMCS-SGMCINA 60
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
W CD E DC D +DE C Q +C + +CI +W CD E DC+
Sbjct: 61 GWRCDGEFDCD-----DQSDEKNCTTSMCTADQFRCG-NGRCIRLSWRCDGEDDCA---- 110
Query: 322 VDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF----- 375
D++DE+ +K S C P++ +CG+ +C+ K C+ DC +G DE P
Sbjct: 111 -DHSDEEGCEKTESPP---CAPDQFQCGNG-RCIGQRKVCNEVNDCGDGTDEQPHHDCRP 165
Query: 376 CNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTN 431
+++ +C N CS KC C C G + C D DEC +G C Q CTN
Sbjct: 166 RSSEGNCNQNNGGCSQKCQMVRGLVQCTCHTGYRLMDDGKACQDVDECAEEGYCSQGCTN 225
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
T ++ C C +GY LRPD +SC A+ EP ++F++ +DIR++
Sbjct: 226 TEGAFQCWCVQGYELRPDKRSCKALG---PEPV-LLFANRIDIRQV 267
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C SS C+ CDG+ DC + DE + CT QF CG G+CI SW+C
Sbjct: 45 CRSVEFMC-SSGMCINAGWRCDGEFDCDDQSDEKNCTTSMCTADQFRCGNGRCIRLSWRC 103
Query: 225 DGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG DC D SDE T C Q QC + +CI +C+E DC D TD
Sbjct: 104 DGEDDC-ADHSDEEGCEKTESPPCAPDQFQCG-NGRCIGQRKVCNEVNDCG-----DGTD 156
Query: 282 E 282
E
Sbjct: 157 E 157
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY+ LYW D+ + TVE DGS VL
Sbjct: 698 KIERAGMDASSRVVIISSNLTWPNGLAIDYDTKRLYWADAGMKTVEYGNFDGSGRQVL 755
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ KA ++G N +V+ ++ P L ID+ D LYW DS + +E +DG+H VL
Sbjct: 304 DRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVANLDGTHRKVLL 363
Query: 166 HPN 168
N
Sbjct: 364 WQN 366
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++ M G R L++ N+ WP+ L ID L W D+H +E+ ++G + L
Sbjct: 1011 KLERSAMDGSGRVVLISNNLGWPNGLAIDTAGSQLLWADAHTERIEAADLNGQNRRTLVT 1070
Query: 167 P 167
P
Sbjct: 1071 P 1071
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-SHNAVLC 165
R+E A M G NR + ++ WP+ L IDY +YW D+ + +E +DG + AV+
Sbjct: 392 RIEYANMDGSNRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIEKADLDGRNRKAVIS 451
Query: 166 H 166
H
Sbjct: 452 H 452
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 32/59 (54%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ +A + G ++++ ++ L +D+ +YW D+ NT+E R+DG+ VL +
Sbjct: 1229 IRRANLDGSGMETVISQGLKTTDGLAVDWVARNMYWTDTGRNTIEVARLDGTGRKVLIN 1287
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD I+ D + + +A +G + +V +++ P+ L ID+ LYW D+ +
Sbjct: 595 WDAKDGYIYWTDVTTDSINRALWNGTQQEVVVDTSLESPAGLAIDWVTSKLYWTDAGTDR 654
Query: 151 VESVRVDGSHNAVLCHPN 168
+E DGS VL N
Sbjct: 655 IEVSNADGSMRTVLIWEN 672
>gi|402580911|gb|EJW74860.1| hypothetical protein WUBG_14232, partial [Wuchereria bancrofti]
Length = 237
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 127/274 (46%), Gaps = 56/274 (20%)
Query: 141 LYW-CDSHLNTVESVRVDGSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
+YW CD + ++ D + LC P++ RC + QC++L CDG+ DC +G DE
Sbjct: 11 VYWLCDGDNDCYDNTDEDKERCPSALCRPDQFRCANKRQCISLKNHCDGQQDCDDGSDED 70
Query: 199 PFC--NAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCA 253
N +CT +F+C G CIP +WKCDG DC EDGSDEP + QC + +CA
Sbjct: 71 SCFSQNDKCTHNEFTCASDGLCIPIAWKCDGQKDC-EDGSDEPESLCSSTQCASDHFKCA 129
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI + WLCD E DC DN+DED + H C Q+ LS +C
Sbjct: 130 -NGRCIFNTWLCDGENDCG-----DNSDEDVE--HGCQRSQL---LSIRCP--------- 169
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
F H A GS + C+ CDGK C G DEG
Sbjct: 170 -------------------FEHMACP--------GSPDICIPFHNLCDGKDHCPGGTDEG 202
Query: 374 PFC-NNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
C + + C+ KC +P G +C CP G+
Sbjct: 203 GRCARDLCAADRAACTFKCHMSPDGPLCSCPFGE 236
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP WLCD + DC DNTDED ++ S LC P++ RC + QC++L CD
Sbjct: 7 RCIPVYWLCDGDNDC-----YDNTDEDKERCPS---ALCRPDQFRCANKRQCISLKNHCD 58
Query: 362 GKPDCSNGEDE 372
G+ DC +G DE
Sbjct: 59 GQQDCDDGSDE 69
>gi|195054557|ref|XP_001994191.1| GH23437 [Drosophila grimshawi]
gi|193896061|gb|EDV94927.1| GH23437 [Drosophila grimshawi]
Length = 1024
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 149/371 (40%), Gaps = 75/371 (20%)
Query: 165 CHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI----- 218
C +E C G C+ L+ CD DCS+G DE CN C +F+C G+CI
Sbjct: 270 CSQDEFACKGGDVGCIPLAWMCDQSKDCSDGSDEAT-CNTTCRSDEFTCSNGRCIQKRWV 328
Query: 219 -----------------------------------PESWKCDGFVDCLEDGSDEPNTC-- 241
P+ W CDG DC G+D+ C
Sbjct: 329 CDHDDDCGDGSDERNCPKIECNRNNTFTCSNGACIPKGWVCDGEPDC--PGADDERDCAK 386
Query: 242 ----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQV 295
+ C + QC C+ +WLCD + DC D DE K C Q
Sbjct: 387 SQVIVTPCLAHEYQCRDRITCLHQSWLCDGDRDCP-----DGDDEHASNCKNITCRPDQF 441
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC + CI + C+ + DC+ D +DE + + ++ CG QC+
Sbjct: 442 QCG-DRSCIAGHLACNGQADCA-----DGSDERECRLKAQTKGCNATSQFDCGGG-QCIP 494
Query: 356 LSKFCDGKPDCSNGEDE--GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNK 410
LSK CD + DC +GEDE G N+ N C H+C G C C G N+
Sbjct: 495 LSKVCDKRKDCPDGEDEPAGKCEVNECASRNGGCMHRCVDHLVGYSCDCHQGYKLSGDNR 554
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEPASIIFS 469
T C+D +EC G C Q C N + C C GY P + C A + AS++ +
Sbjct: 555 T-CLDVNECEQPGVCSQICVNEVGGFKCECEAGYMRDPRNHTRCKAT----EGHASLLLA 609
Query: 470 STVDIRRIHLN 480
DIR+I L+
Sbjct: 610 RRHDIRKIALD 620
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 152/386 (39%), Gaps = 102/386 (26%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIP 219
C + RC +S +C+ + CDG DC + DE F + C QF C G CI
Sbjct: 185 YCEEKQFRC-NSGECIPIRFVCDGSSDCKDHSDERLEQCKFAESTCGAEQFRCNNGYCIS 243
Query: 220 ESWKCDGFVDCLEDGSDE-PNTCIHQ-CFNGQVQCALSK-KCIPHNWLCDEEMDCS--TD 274
+ W+CD DC DGSDE P C + C + C CIP W+CD+ DCS +D
Sbjct: 244 KKWRCDRENDC-ADGSDEAPGLCKSKPCSQDEFACKGGDVGCIPLAWMCDQSKDCSDGSD 302
Query: 275 DIVDNTDEDWDKFHQCFNGQ-------------------------VQCALSK-------K 302
+ NT D+F C NG+ ++C +
Sbjct: 303 EATCNTTCRSDEF-TCSNGRCIQKRWVCDHDDDCGDGSDERNCPKIECNRNNTFTCSNGA 361
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVALSKFCD 361
CIP W+CD E DC D++ D S V C +E +C C+ S CD
Sbjct: 362 CIPKGWVCDGEPDCP------GADDERDCAKSQVIVTPCLAHEYQCRDRITCLHQSWLCD 415
Query: 362 GKPDCSNGEDEGP-------------------------FCNNKADCEN--------LKCS 388
G DC +G+DE CN +ADC + LK
Sbjct: 416 GDRDCPDGDDEHASNCKNITCRPDQFQCGDRSCIAGHLACNGQADCADGSDERECRLKAQ 475
Query: 389 HK-CSPTPR----GAMCF-----------CPAGQNPNKTQCVDADECL-IDGSCDQTCTN 431
K C+ T + G C CP G++ +C + +EC +G C C +
Sbjct: 476 TKGCNATSQFDCGGGQCIPLSKVCDKRKDCPDGEDEPAGKC-EVNECASRNGGCMHRCVD 534
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVN 457
+ Y C C +GY L D ++C VN
Sbjct: 535 HLVGYSCDCHQGYKLSGDNRTCLDVN 560
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ ++ +++WP+ + +D + +YW D LN + S DGS + +
Sbjct: 743 RIERAGMDGSHRTTIINYDVKWPNGITLDLVRKRIYWVDGKLNVISSANYDGSQRRQILY 802
Query: 167 PNEL 170
E
Sbjct: 803 STEY 806
>gi|307775420|ref|NP_001182731.1| low-density lipoprotein receptor isoform 5 precursor [Homo sapiens]
Length = 739
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC----IHQ-----CFN 247
G C F C CIP+ W CD DC EDGSDE P C + Q C
Sbjct: 20 GTAVGDRCERNDFQCNSSTCIPQLWACDNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSA 78
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ C LS +CI +W CD DC D +DE+ C + QC+ CI +
Sbjct: 79 FEFHC-LSGECIHSSWRCDGGPDCK-----DKSDEENCAVATCRPDEFQCS-DGNCIHGS 131
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDC 366
CD E DC D +DE N LC PN+ +C S +C+ L K C+ DC
Sbjct: 132 RQCDREYDCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDC 181
Query: 367 SNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDG 423
+ DE +C N CSH C+ G C CP G Q + +C D DEC
Sbjct: 182 RDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD 241
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C Q C N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 242 TCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 415 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 466
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 467 IDVNGGNRKTILEDEKRLAHPFSL 490
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S +C+ S CDG PDC + DE A C P +F C G CI S +C
Sbjct: 76 CSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQC 134
Query: 225 DGFVDCLEDGSDE 237
D DC +D SDE
Sbjct: 135 DREYDC-KDMSDE 146
>gi|417399687|gb|JAA46835.1| Putative very low-density lipoprotein receptor [Desmodus rotundus]
Length = 362
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 120/254 (47%), Gaps = 48/254 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 GAGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCSNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWQCDGDPDC-EDGSDESPEQCHMRTCRTNEISCGAHSTQCIPESWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNMTCSSDEFTCSSGRCISRNFVCNGQDDCNDGSDELNCAPPSCGTHEFQCSAS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ A+ C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPAIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE 372
CDG PDC +G DE
Sbjct: 257 RCDGDPDCKDGSDE 270
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 115/246 (46%), Gaps = 44/246 (17%)
Query: 164 LCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C NE+ CG+ S QC+ S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 112 TCRTNEISCGAHSTQCIPESWRCDGENDCDSGEDEENCGNMTCSSDEFTCSSGRCISRNF 171
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNT 280
C+G DC DGSDE N C + QC+ S CIP +W+CD++ DCS +D+ ++
Sbjct: 172 VCNGQDDC-NDGSDELNCAPPSCGTHEFQCSASS-CIPISWVCDDDADCSDQSDESLEQC 229
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------ 316
+C ++QC S +CI W CD + DC
Sbjct: 230 GRQPAIHTKCPASEIQCG-SGECIHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDG 288
Query: 317 ----------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
D VD +DE K +H P + +C S +C+ ++K C+ + DC
Sbjct: 289 SCIHGSRQCNGIRDCVDGSDEVNCKNVNH---CLGPGKFKC-RSGECIDITKVCNQEQDC 344
Query: 367 SNGEDE 372
+ DE
Sbjct: 345 RDWSDE 350
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
H+ T + + ++ C P RC N DC +GEDE N C+
Sbjct: 109 HMRTCRTNEISCGAHSTQCIPESWRCDGEN-------------DCDSGEDEENCGNMTCS 155
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+F+C G+CI ++ C+G DC DGSDE N C + QC+ S CIP +W+CD
Sbjct: 156 SDEFTCSSGRCISRNFVCNGQDDC-NDGSDELNCAPPSCGTHEFQCSAS-SCIPISWVCD 213
Query: 267 EEMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
++ DCS +D+ ++ +C ++QC S +CI W CD + DC D
Sbjct: 214 DDADCSDQSDESLEQCGRQPAIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DG 267
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE + + C P++ C C+ S+ C+G DC +G DE
Sbjct: 268 SDE-----VNCPSRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDE 309
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 114/275 (41%), Gaps = 45/275 (16%)
Query: 2 IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ C ++ C A S +CIP +W CD E DC + + +N + + ++
Sbjct: 110 MRTCRTNEISCGAHSTQCIPESWRCDGENDCDSGEDEENCGNMTCSSDEFTCSSGRCISR 169
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSP 120
F Q C N S L CA + + + A P+
Sbjct: 170 NFVCNGQDDC-----NDGSDELNCAPPSCGTHEFQCSASSCIPI---------------- 208
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--LCHPNELRCGSSNQC 178
S V D + D D ES+ G A+ C +E++CGS +C
Sbjct: 209 ----------SWVCDDDADCSDQSD------ESLEQCGRQPAIHTKCPASEIQCGS-GEC 251
Query: 179 VALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
+ CDG PDC +G DE + C P QF C G CI S +C+G DC+ DGSDE
Sbjct: 252 IHKKWRCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCV-DGSDEV 310
Query: 239 N-TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
N ++ C G+ +C S +CI +C++E DC
Sbjct: 311 NCKNVNHCLGPGKFKC-RSGECIDITKVCNQEQDC 344
>gi|327271173|ref|XP_003220362.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Anolis carolinensis]
Length = 936
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 151/367 (41%), Gaps = 72/367 (19%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGP---FCNAE--------------- 204
+C ++ CG SSN+C+ S CDG+ DC +G DE C+A
Sbjct: 108 VCLAEKISCGDSSNKCIPSSWRCDGEKDCESGVDEAGCTNICSASEFQCSNKTCIATIFV 167
Query: 205 --------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH 243
C P +F C +CIP+ W CD DC ED SDE C H
Sbjct: 168 CDGDDDCGDGSDERKCPPLTCNPNEFQCNNSQCIPQIWVCDNHPDC-EDQSDELMEKCGH 226
Query: 244 Q--------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
+ C + QC + +CI NW CD + DC D +DE C +
Sbjct: 227 KTKPPVTSTCAAHEFQCG-NGECIHLNWKCDGDEDCK-----DKSDEQDCPLVTCSPDEF 280
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
QC CI C++ DC DN+DE + A PN+ +C S +C+
Sbjct: 281 QCG-DGTCIHGAKQCNKVHDCP-----DNSDE---AGCVNEAACESPNKFQC-KSGECIE 330
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN-PNKTQ 412
K CD DC + DE +C N CSH C G C CP G +K
Sbjct: 331 EVKVCDSHRDCRDWSDEPLKACGVNECALNNGGCSHTCRDLKIGYTCECPQGYKLLDKKT 390
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC +C Q C N Y C C EGY + K+C AV + +IF++
Sbjct: 391 CGDIDECENPDACSQICINYKGDYKCECYEGYEMDTLSKNCKAVG----KSPYLIFTNRH 446
Query: 473 DIRRIHL 479
++R+I L
Sbjct: 447 EVRKIDL 453
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 146/388 (37%), Gaps = 108/388 (27%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+A C ++ +C + +C+ CD DC++ DE C F+C G CIP
Sbjct: 25 SAKECEEDQFQC-RNERCIPSIWKCDEDDDCTDNSDETDCPKKTCAETDFTCNNGHCIPS 83
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTD-DI 276
WKCDG +C DGSDE TC Q C ++ C S KCIP +W CD E DC + D
Sbjct: 84 RWKCDGEDEC-PDGSDESEATCTKQVCLAEKISCGDSSNKCIPSSWRCDGEKDCESGVDE 142
Query: 277 VDNTDEDWDKFHQCFN--------------------------------GQVQCALSKKCI 304
T+ QC N + QC S +CI
Sbjct: 143 AGCTNICSASEFQCSNKTCIATIFVCDGDDDCGDGSDERKCPPLTCNPNEFQCNNS-QCI 201
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN----AVLCHPNELRCGSSNQCVALSKFC 360
P W+CD DC D +DE +K C +E +CG+ +C+ L+ C
Sbjct: 202 PQIWVCDNHPDCE-----DQSDELMEKCGHKTKPPVTSTCAAHEFQCGNG-ECIHLNWKC 255
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCS---------------------HKCSPTPRGAM 399
DG DC + DE DC + CS H C A
Sbjct: 256 DGDEDCKDKSDE-------QDCPLVTCSPDEFQCGDGTCIHGAKQCNKVHDCPDNSDEAG 308
Query: 400 CFCPAG-QNPNKTQCVDAD----------------------------ECLI-DGSCDQTC 429
C A ++PNK QC + EC + +G C TC
Sbjct: 309 CVNEAACESPNKFQCKSGECIEEVKVCDSHRDCRDWSDEPLKACGVNECALNNGGCSHTC 368
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ + Y C C +GY L D K+C ++
Sbjct: 369 RDLKIGYTCECPQGYKLL-DKKTCGDID 395
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN LA+++ H+N + +S ++ L ++ +L P +D
Sbjct: 512 LNSPEGLAMDWVHKNIYWTDSGNKTISVATTDGSKRRTLFST-NLSEPRAIAVDPTRGFM 570
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G +R LVT NI+WP+ + +D LYW DS L+ + SV +
Sbjct: 571 YWSDWGDIAKIEKAGLNGVDRQVLVTDNIEWPNGITLDLLNQRLYWVDSKLHLLSSVDFN 630
Query: 158 GSHNAVL 164
G++ VL
Sbjct: 631 GNNRKVL 637
>gi|410924698|ref|XP_003975818.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Takifugu rubripes]
Length = 977
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 152/373 (40%), Gaps = 79/373 (21%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDE------------GPF------CNAE- 204
C P + CG S+N+CV+LS CDG+ DC NG DE G F C A
Sbjct: 111 CPPEKFDCGGSTNKCVSLSWRCDGEKDCENGADEEDCASDAKACPSGEFMCGNRKCLAST 170
Query: 205 -----------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
C P C +C+P W CDG DC + + P C
Sbjct: 171 YVCDGDDDCGDGSDELKCASPLTCGPDHLRCNTSECVPLMWSCDGDPDCSDSSDEGPERC 230
Query: 242 -----------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
C G+ +CA + +C+ W CD + DC D +DE C
Sbjct: 231 GGDGAPYLLNRRANCSAGEFRCA-NGECVRLTWKCDGDPDCK-----DKSDESDCPLLTC 284
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGS 349
+ QC CI C++ DC VD++DE NA C P + C
Sbjct: 285 RPDEFQCG-DGSCIHGTKQCNKVHDC-----VDHSDESG----CVNATRCEGPLKFLC-K 333
Query: 350 SNQCVALSKFCDGKPDCSNGEDE-GPFCN-NKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
+ +C+ SK CD DC + DE C N+ N CSH C P G C CP G
Sbjct: 334 NGECIDSSKVCDSVKDCKDRSDEPKKECGLNECMINNGGCSHVCMDRPIGFECQCPPGYR 393
Query: 408 P-NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
++ C D DEC +C Q C N + C C EGY + P K+C A + + +
Sbjct: 394 LLDRKTCGDIDECENPDACSQICINYKGDFKCECYEGYEMDPVTKTCKA----EGKSPYL 449
Query: 467 IFSSTVDIRRIHL 479
+F++ +IRRI L
Sbjct: 450 LFTNRHEIRRIDL 462
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 88/182 (48%), Gaps = 36/182 (19%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQCALSK-KCIPH 261
C P +F+C G+C+P W+CDG +C DGSDE TC I C + C S KC+
Sbjct: 70 CAPAEFACLNGQCVPGRWRCDGEPEC-PDGSDEAAETCSIQTCPPEKFDCGGSTNKCVSL 128
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL---------CDE 312
+W CD E DC ++ D D D C +G+ C ++KC+ ++ +
Sbjct: 129 SWRCDGEKDC--ENGADEEDCASDA-KACPSGEFMCG-NRKCLASTYVCDGDDDCGDGSD 184
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ C++ + C P+ LRC +S +CV L CDG PDCS+ DE
Sbjct: 185 ELKCAS------------------PLTCGPDHLRCNTS-ECVPLMWSCDGDPDCSDSSDE 225
Query: 373 GP 374
GP
Sbjct: 226 GP 227
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 85 AQINDLLNSWDLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPS 130
A +L S DL P LD ++EKAGM+G +R LV +I+WP+
Sbjct: 553 ATKRRVLISTDLSEPRSIALDPHHGFMYWSDWGTRAKIEKAGMNGVDRQVLVADSIEWPN 612
Query: 131 SLVIDYNQDILYWCDSHLNTVESVRVDGSHNA-------VLCHPNEL 170
+ +D LYW DS L+ + SV ++G+H L HP L
Sbjct: 613 GITLDVANRRLYWVDSKLHLIASVDLNGAHRRTHMSSAETLGHPYAL 659
>gi|114675453|ref|XP_001167024.1| PREDICTED: low-density lipoprotein receptor isoform 1 [Pan
troglodytes]
Length = 739
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/299 (33%), Positives = 132/299 (44%), Gaps = 36/299 (12%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC----IHQ-----CFN 247
G C F C CIP+ W CD DC EDGSDE P C + Q C
Sbjct: 20 GTAVGDRCERNDFQCNSSTCIPQLWACDNDPDC-EDGSDEWPQHCRGLYVFQGDSSPCSA 78
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ C LS +CI +W CD DC D +DE+ C + QC+ CI +
Sbjct: 79 FEFHC-LSGECIHSSWRCDGGPDCK-----DKSDEENCAVATCRPDEFQCS-DGNCIHGS 131
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDC 366
CD E DC D +DE N LC PN+ +C S +C+ L K C+ DC
Sbjct: 132 RQCDREYDCK-----DMSDE----VGCVNVTLCEGPNKFKC-HSGECITLDKVCNMARDC 181
Query: 367 SNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDG 423
+ DE +C N CSH C+ G C CP G Q + +C D DEC
Sbjct: 182 RDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQHPD 241
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+C Q C N Y C C EG+ L P K+C AV A + F++ ++R++ L+ S
Sbjct: 242 TCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRKMTLDRS 296
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 415 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 466
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 467 IDVNGGNRKTVLEDEKRLAHPFSL 490
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S +C+ S CDG PDC + DE A C P +F C G CI S +C
Sbjct: 76 CSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDEENCAVATCRPDEFQCSDGNCIHGSRQC 134
Query: 225 DGFVDCLEDGSDE 237
D DC +D SDE
Sbjct: 135 DREYDC-KDMSDE 146
>gi|341889461|gb|EGT45396.1| hypothetical protein CAEBREN_06620 [Caenorhabditis brenneri]
Length = 790
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 146/331 (44%), Gaps = 45/331 (13%)
Query: 169 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
E CG+ S C+ + CD DC NG DE EC G F C GKC+ ++KCDG
Sbjct: 47 EFDCGTGSLGCLPKAWQCDNVKDCHNGADEIDCEPNECKEGYFLCRNGKCMESTYKCDGI 106
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC D SDE H +N + + +P + + + DD D
Sbjct: 107 PDC-PDKSDEK----HCKYNYR------RLNVPAPFHYGDPSLYTYDDGFDE-------- 147
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD--DIVDNTDEDWDKYFSHNAVLCHPNEL 345
+ C G C + CIP+ CD + DC+ D D + T ++ + V P+ +
Sbjct: 148 NGCLPGFGYCPSQQSCIPNQLFCDGQADCAGDMEDERNCTRDEPIVILPSSYVGAIPSIM 207
Query: 346 R-----------CGSSNQ-----CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
R C ++ C+ +++ C+ K +C G+DE C ++C +C H
Sbjct: 208 RIYENPCKDKFVCKTNETYKDEVCIQMNELCNAKKECPMGDDESEKC---SECSTKRCGH 264
Query: 390 KCSPTPRGAMCFCPAGQ--NPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTL 446
C TP GA C C G NP+ CVD DEC L +C C N S+ CSC +GY L
Sbjct: 265 HCKNTPTGAKCECRKGYRLNPDGITCVDIDECTLPKRACHHFCENHIGSFRCSCAKGYNL 324
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
+ D KSC N P + F + ++ R +
Sbjct: 325 KDDEKSCLLTN-PSKGSLLLGFYNKIEERPL 354
>gi|402888262|ref|XP_003907489.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Papio anubis]
Length = 1173
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 137/504 (27%), Positives = 191/504 (37%), Gaps = 134/504 (26%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL 69
QC +K CI W+CDE+ DC+ D D + D + G H EF +N
Sbjct: 120 FQCKTTKHCISKLWVCDEDPDCA--DASDEANCD------KKTCGPH----EFQCKNN-- 165
Query: 70 CFIQQQNVSSVRLRCAQINDLLNSWDLP--APEIFPLDERLEKAGMHGENRSPLVTKNIQ 127
N RC ND ++ D P+ L + L G +R
Sbjct: 166 ------NCIPDHWRCDSQNDCSDNSDEENCKPQTCTLKDFLCANGDCVSSR--------- 210
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDG 187
+WCD + + D + + C ++ +C S+ QC+ CDG
Sbjct: 211 --------------FWCDGDFDCADGS--DERNCEISCSKDQFQC-SNGQCIPAKWKCDG 253
Query: 188 KPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
DC GEDE + C+ ++ C G CI S KC+G DC DGSDE + C+ +C
Sbjct: 254 HEDCKYGEDEKSCEPASPTCSSSEYICASGGCISASLKCNGEYDCA-DGSDEMD-CVTEC 311
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------ 299
Q +C +CIP WLCD DC VD +DE+ C G C
Sbjct: 312 KEDQFRCKNKARCIPIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCN 361
Query: 300 SKKCIPHNWLCDEEMDCS--------------------------------------TDDI 321
+ C H+W+CD E DC DD
Sbjct: 362 NSLCKLHSWVCDGEDDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDC 421
Query: 322 VDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF 375
DN+DED ++ A C +E C S+ +C+ + CD DC +G DE P
Sbjct: 422 GDNSDEDHCSGKLTYKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPT 480
Query: 376 ----------CNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDG 423
C + A C +K S C C G +N QC D +ECL+ G
Sbjct: 481 EYTCEDNVNPCGDDAYCNQIKTS---------VFCQCKPGFQRNMKNRQCEDLNECLVFG 531
Query: 424 SCDQTCTNTHLSYVCSCTEGYTLR 447
+C C N SY C C + + R
Sbjct: 532 TCSHQCINVEGSYKCVCDQNFQER 555
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 99/204 (48%), Gaps = 19/204 (9%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFV 228
RC +++C+ CD DC +G DE C +C PG+F CG G C ++ CDG
Sbjct: 1 FRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFICDGEN 59
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE +
Sbjct: 60 DC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDERDCPEN 113
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C QC +K CI W+CDE+ DC+ N D+ C P+E +C
Sbjct: 114 SCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPHEFQC- 162
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
+N C+ CD + DCS+ DE
Sbjct: 163 KNNNCIPDHWRCDSQNDCSDNSDE 186
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEE 268
F C KCIP WKCD DC DGSDEP+ C +C G+ QC +P ++CD E
Sbjct: 1 FRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCALPA-FICDGE 58
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE H C +GQ +C ++KCIP N C+ + DC DE+
Sbjct: 59 NDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG--------DEE 105
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 106 DERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 148
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 74 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 133
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 134 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 186
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + + C
Sbjct: 187 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCEISCSK 234
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC+ CDG DC GEDE
Sbjct: 235 DQFQC-SNGQCIPAKWKCDGHEDCKYGEDE 263
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 97/208 (46%), Gaps = 18/208 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 115 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 174
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C CA + C+ + CD + DC+ D +DE
Sbjct: 175 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDERN 227
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q QC+ + +CIP W CD DC ED +K + C +E
Sbjct: 228 CEI-SCSKDQFQCS-NGQCIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSSSE 277
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C S C++ S C+G+ DC++G DE
Sbjct: 278 YICASGG-CISASLKCNGEYDCADGSDE 304
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 666 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSIVSVSS 725
Query: 164 ---LCHPNEL 170
L HP+ +
Sbjct: 726 KQGLLHPHRI 735
>gi|296489057|tpg|DAA31170.1| TPA: low density lipoprotein receptor-related protein 8 [Bos
taurus]
Length = 797
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DC D SDE + C + C + CI W
Sbjct: 41 ECDENQFRCRNERCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCN-NGHCIRERW 98
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E DC D D ++ K C ++ C S KC+P +W CD E DC +
Sbjct: 99 KCDGEEDCP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCES---- 151
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 152 -GADE---AGCATSLGTCRGDEFQCGDGT-CVPAIKRCNQEQDCPDGSDETGCLQGLNEC 206
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 207 LHNNGGCSHICTDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCE 266
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C AV S+IF++ ++RRI L
Sbjct: 267 CHPGYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EK+G++G R LV+ I+WP+ + +D LYW DS L+ + S+ G + +
Sbjct: 427 FQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKM 486
Query: 164 L 164
L
Sbjct: 487 L 487
>gi|358333937|dbj|GAA52395.1| very low-density lipoprotein receptor [Clonorchis sinensis]
Length = 3150
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 134/319 (42%), Gaps = 63/319 (19%)
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
+ + ++ +L C T ES +V+ + C P E C + QC+ KFCDG+ DC
Sbjct: 1857 ITEADRGLLIRC--MYRTGESTQVEITVETP-CGPGEAMC-RNGQCLPPEKFCDGRVDCY 1912
Query: 193 NGEDEGP-----FCNAECTP-GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
+G DE P C P +F C G+CI +CDG DC DGSDE C +C
Sbjct: 1913 DGSDESPPRCYRIPVRPCDPEREFRCLSGECIRVQRRCDGLTDC-RDGSDE-TACTVRCG 1970
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKC 303
G+ C S +C+ +C+ DC D +DE+ C Q +C + +C
Sbjct: 1971 AGKFTCG-SGECVSATLICNRRRDC-----FDGSDEEGCPMGPTSPCLPNQFRCVRTGQC 2024
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I CD DC +D +DE + C PNE RC S QC+ K CDG+
Sbjct: 2025 IDARKRCDGHPDC-----IDFSDET-----NCAERPCGPNEFRCTVSGQCIDARKRCDGR 2074
Query: 364 PDCSNGEDE----------------------GPFCNNKADCENLKCSHKCSPTPRGAMCF 401
PDCS+ DE CN +ADC + C P G
Sbjct: 2075 PDCSDNTDEYGCPPRCRPDQFACSSGECLDARLVCNGRADCLDGSDERNCELRPCG---- 2130
Query: 402 CPAGQNPNKTQCVDADECL 420
PN+ +CV +C+
Sbjct: 2131 ------PNEFRCVQTGQCI 2143
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C PN+ RC + QC+ K CDG PDC + DE C P +F C + G+CI +
Sbjct: 2011 CLPNQFRCVRTGQCIDARKRCDGHPDCIDFSDETNCAERPCGPNEFRCTVSGQCIDARKR 2070
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D +DE C +C Q C+ S +C+ +C+ DC +D +DE
Sbjct: 2071 CDGRPDC-SDNTDE-YGCPPRCRPDQFACS-SGECLDARLVCNGRADC-----LDGSDER 2122
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C + +C + +CI CD DC D D D + + P
Sbjct: 2123 NCELRPCGPNEFRCVQTGQCIDSRKRCDGRPDCP--DRSDELDCAYGPILIPERPIARPY 2180
Query: 344 E---LRCGSSNQCVAL 356
E L C S+ V++
Sbjct: 2181 ESIQLECRSTRPGVSV 2196
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 104/251 (41%), Gaps = 51/251 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN-AECTPGQFSCGMGKCIPESW 222
C P E C C+ C+G+ DC +G DE P C +C+P QF+C G+CIP S
Sbjct: 1548 CAPMETMC-RDGTCIRNEYLCNGRADCPDGSDEKAPHCEIPDCSPAQFACLSGECIPASL 1606
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KC+G DC DGSDE + C +C Q C S +CI N C+ DC D +DE
Sbjct: 1607 KCNGREDCY-DGSDEVD-CPTRCRPDQFMC-FSGECIASNQRCNGFRDCR-----DGSDE 1658
Query: 283 D------------------WDKFHQCFNGQVQC--------ALSKKCIPHNWLCDEEMDC 316
+ QC + QV S + +PH + ++
Sbjct: 1659 TGCVLPPVVRPGKIVIPPYGEVELQCTSNQVGVRPILRVRNGTSVENLPHFTVIRPNVET 1718
Query: 317 STDDIVDNTDEDWDKYF---------SHNAVL----CHPNELRCGSSNQCVALSKFCDGK 363
T+ D S ++ C P E+ C + CV FC+G+
Sbjct: 1719 IIARTSSLTERDGRLVVQCVYPTGESSETEIVIDSPCLPTEMMC-RNRDCVRRELFCNGR 1777
Query: 364 PDCSNGEDEGP 374
DC++G DEGP
Sbjct: 1778 RDCADGSDEGP 1788
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 98/238 (41%), Gaps = 46/238 (19%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
N+C++ + CDG+ CSNG DE + +C+P C G+CIP+ +CDG DC +DG
Sbjct: 843 NECISPALRCDGREHCSNGSDERGCPSTDCSPPNIRCPSGECIPQEKRCDGSPDC-KDGF 901
Query: 236 DE------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDK 286
DE P C F Q S CI N CD DC S + +T E K
Sbjct: 902 DEWGCEPRPTGCRPDQFTCQ-----SGDCIGMNRRCDGRQDCFDGSDERDCYSTTETHRK 956
Query: 287 FH---------QCFNGQ--------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
+ +C +G+ + S + +P ++ I D T+ +
Sbjct: 957 EYIRPYTTYRLECRSGEPGVSPSILLANGTSVEQLPRFQTSRPSLEHMVVVIADLTEREH 1016
Query: 330 DKYFS-----------HNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
S A+ C P ++ C CV +FCDG+ DC +G DE P
Sbjct: 1017 GLLLSCTSGTSIPIVTEIAITSPCPPTDMMC-RDGSCVRRERFCDGRMDCLDGSDERP 1073
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---FCNAECTPGQFSCGMGKCIPES 221
C P+E+ C C+ FC+G+ +C +G DE P +A CT GQF+C G CI
Sbjct: 1339 CRPSEMMC-RDGTCIPRELFCNGRLECPDGSDERPPHCTSSARCTTGQFACASGDCIDIR 1397
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+C+G +C DGSDE +C Q CA S +CI C+ + DC
Sbjct: 1398 MRCNGRPEC-ADGSDERGCGPSRCMINQFPCA-SGECIDARLQCNGQKDC 1445
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 102/254 (40%), Gaps = 56/254 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNA--ECTPGQFSCGMGKCIPES 221
C P ++ C CV +FCDG+ DC +G DE P C CT QF+C G+CI
Sbjct: 1169 CPPTDMMC-RDGSCVRRERFCDGRMDCRDGSDERPPHCPGIGACTSNQFACTSGECIGSE 1227
Query: 222 WKCDGFVDCLEDGSDE----------PNTCIHQCFNG----------------QVQCALS 255
+CDG DC DGSDE P I + + +V+
Sbjct: 1228 KRCDGRQDCY-DGSDERGCEMAPLVNPEKSIVRPYGSVEIECRSRVPGVRPSLRVENGTP 1286
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF--NGQVQ---------CALSK--- 301
+ +P + ++ I + T++D C+ GQ C S+
Sbjct: 1287 VETLPRFQVTRPNLETVLVRIGNLTEKDHRIQLTCYCTTGQPSSTEIFIDSPCRPSEMMC 1346
Query: 302 ---KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
CIP C+ ++C D +DE S + C + C S + C+ +
Sbjct: 1347 RDGTCIPRELFCNGRLECP-----DGSDERPPHCTS--SARCTTGQFACASGD-CIDIRM 1398
Query: 359 FCDGKPDCSNGEDE 372
C+G+P+C++G DE
Sbjct: 1399 RCNGRPECADGSDE 1412
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 122/323 (37%), Gaps = 48/323 (14%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ H C Q QC S +CIP +C+ DC+ DN+DE + +
Sbjct: 657 LTHSCGPAQSQCR-SGECIPTERVCNGVPDCT-----DNSDEGPE------FCNAGVVVF 704
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL---PAPEIFPLDERLEKAGMHGEN 117
N ++ SV+ R + + L +D P P + + + + N
Sbjct: 705 PTN------IIVRPMEPFSVQCR-STLPGLAPKFDAHSKPDPVM------IGRLKFYRPN 751
Query: 118 RSPLVTKNIQ-WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSN 176
+ L+ + P SL + +Q + D V G+ C L C S
Sbjct: 752 STTLIINAFRGLPESL--NGSQIRCFAIDGAFRAARIVLRGGA-----CTDGWLPCPFSE 804
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ CDG PDC + DE ++ C F+C +CI + +CDG C +GSD
Sbjct: 805 ICLQPGSVCDGSPDCPDAADERGCEDSWCGWPDFACNKNECISPALRCDGREHC-SNGSD 863
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD---KFHQCFNG 293
E C ++C S +CIP CD DC D DE W + C
Sbjct: 864 ERGCPSTDCSPPNIRCP-SGECIPQEKRCDGSPDCK-----DGFDE-WGCEPRPTGCRPD 916
Query: 294 QVQCALSKKCIPHNWLCDEEMDC 316
Q C S CI N CD DC
Sbjct: 917 QFTCQ-SGDCIGMNRRCDGRQDC 938
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 122/312 (39%), Gaps = 32/312 (10%)
Query: 97 PAPEIFPLDERLEKAGMHGENRSPLVTKN-----IQWPSSLVIDYNQDILYWCDSHLNTV 151
P P P+ E + +NR ++ + I P L YN C +
Sbjct: 592 PLPGTSPVAEFAPGVHVESDNRFQVIQPDSTRLIITAPQGLSDVYN-GYRIMCRVPGVST 650
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQF 210
+ + + +H+ C P + +C S +C+ + C+G PDC++ DEGP FCNA
Sbjct: 651 KYITIYLTHS---CGPAQSQC-RSGECIPTERVCNGVPDCTDNSDEGPEFCNAGVVVFPT 706
Query: 211 SCGMGKCIPESWKCDGFVDCLE---DGSDEPNTCIHQCF-----NGQVQCALSKKCIPHN 262
+ + P S +C + L D +P+ + N + + +P +
Sbjct: 707 NIIVRPMEPFSVQCRSTLPGLAPKFDAHSKPDPVMIGRLKFYRPNSTTLIINAFRGLPES 766
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
L ++ C D + C +G + C S+ C+ +CD DC
Sbjct: 767 -LNGSQIRCFAIDGAFRAARIVLRGGACTDGWLPCPFSEICLQPGSVCDGSPDCPDAADE 825
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
++ W C + C + N+C++ + CDG+ CSNG DE +
Sbjct: 826 RGCEDSW----------CGWPDFAC-NKNECISPALRCDGREHCSNGSDERGCPSTDCSP 874
Query: 383 ENLKC-SHKCSP 393
N++C S +C P
Sbjct: 875 PNIRCPSGECIP 886
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 99/256 (38%), Gaps = 56/256 (21%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
++ C + C S + C+ + C+G+P+C++G DE + C QF C G+CI
Sbjct: 1377 SSARCTTGQFACASGD-CIDIRMRCNGRPECADGSDERGCGPSRCMINQFPCASGECIDA 1435
Query: 221 SWKCDGFVDCLEDGSDE----------PNTCIHQCFNG-QVQCALSKKCIPHNWLCDEEM 269
+C+G DC D SDE P + + + +++C K +P
Sbjct: 1436 RLQCNGQKDCY-DESDEYGCDGGPILRPQRPVGRPYGSVEIECRSMKPGVPPIVTLGNGT 1494
Query: 270 DCS---------------TDDIVDNTDEDWDKFHQCFNGQVQCALSK------------- 301
D + I D T+ D +C + L++
Sbjct: 1495 DVAHLPRFTVSKPNHETVLVRISDLTERDRGLVLRCSYPTGEMNLTEILIDSPCAPMETM 1554
Query: 302 ----KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVAL 356
CI + +LC+ DC D +DE H + C P + C S +C+
Sbjct: 1555 CRDGTCIRNEYLCNGRADCP-----DGSDEKA----PHCEIPDCSPAQFAC-LSGECIPA 1604
Query: 357 SKFCDGKPDCSNGEDE 372
S C+G+ DC +G DE
Sbjct: 1605 SLKCNGREDCYDGSDE 1620
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 132/353 (37%), Gaps = 67/353 (18%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFKRILNGTHTLALEF 62
C + +CA +CIP +LC+ DC+ D +DE ++ + G E
Sbjct: 2781 CGPDEFRCA-DGECIPRGYLCNGRRDCA-----DGSDESREQCGELPQPEGGVQFTPSE- 2833
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
I+ Q VRL C + P P+ L R E +R ++
Sbjct: 2834 ---------IRIQPGRRVRLEC--------RTERPGPD---LQVRFEDGRPVESDRRFVL 2873
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL------CHPNELRCGSSN 176
+ +P ++I+ + + +E + +G + C P + RC +
Sbjct: 2874 YR--PYPGYVIIEVPGG--FDASTRRVVLECIGPNGDKKTSVIYIDTSCQPGQRRCPGGD 2929
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPES-----WKCDGFVD 229
C+ + +FCDG P C +G DE P A C P C + GK S W CDG D
Sbjct: 2930 -CIFVGQFCDGIPHCPDGYDERPENCALCDPITKPCEVVDGKEPTTSHYQLHWSCDGEDD 2988
Query: 230 CLE-----DGSDEPNTCIHQCFNGQVQCALSK-KCIPHNWLCD---------EEMDCSTD 274
C D + QC + +C + IP+++ CD +E DC+
Sbjct: 2989 CGNRFDELDCRNNTRALDPQCSSTHFRCTSGNFQYIPYSYWCDGTLDCAGGEDERDCARP 3048
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIP-----HNWLCDEEMDCSTDDIV 322
I+D + + ++C S P NW C ++D ++V
Sbjct: 3049 AIIDQGRVEEHRVRPGSTLVLECEASGVPPPMIIWRFNWGCLTDLDRMRTEVV 3101
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 11/120 (9%)
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH--QCFNGQVQCALSK 256
F ++ C P + C G CIP C+G ++C DGSDE P C +C GQ CA S
Sbjct: 1334 FIDSPCRPSEMMCRDGTCIPRELFCNGRLEC-PDGSDERPPHCTSSARCTTGQFACA-SG 1391
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CI C+ +C+ D +DE +C Q CA S +CI C+ + DC
Sbjct: 1392 DCIDIRMRCNGRPECA-----DGSDERGCGPSRCMINQFPCA-SGECIDARLQCNGQKDC 1445
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 78/192 (40%), Gaps = 40/192 (20%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH- 261
+ C GQFSC G+CIP + CDG +DC DGSDE + CA+ + IP
Sbjct: 2518 SPCPEGQFSCPNGQCIPTTAICDGRIDC-PDGSDE----------DRAYCAVDLRVIPGY 2566
Query: 262 ---------NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
++C+ + S +V D + F + + P +
Sbjct: 2567 IYVEPYRPVEFVCETNLP-SVQPMVRFADGRTIESDSRF-------IVTRPTPQRVVVRA 2618
Query: 313 EMDCSTDDIVDNTD-EDWDKYFSHNAVLCH------PNELRCGSSNQCVALSKFCDGKPD 365
++ S + +NT E + VL H NE RC C FC+G+PD
Sbjct: 2619 DVGLSGRE--NNTRIECYTTTGLRREVLIHVHSNCSSNEYRC-RDGTCRPRDDFCNGRPD 2675
Query: 366 CSNGEDEGP-FC 376
C +G DE P FC
Sbjct: 2676 CPDGSDEDPRFC 2687
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 80/197 (40%), Gaps = 43/197 (21%)
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF-----NGQVQCAL 254
+C P +F C G+CIP + C+G DC DGSDE QC G VQ
Sbjct: 2776 IVRGDCGPDEFRCADGECIPRGYLCNGRRDC-ADGSDESR---EQCGELPQPEGGVQFTP 2831
Query: 255 SKKCI-PHNWLCDEEMDCSTD--------DIVDNTDEDWDK---FHQCFNGQVQCALSKK 302
S+ I P + ++C T+ D + D+ ++ + G V
Sbjct: 2832 SEIRIQPGRRV---RLECRTERPGPDLQVRFEDGRPVESDRRFVLYRPYPGYVIIE---- 2884
Query: 303 CIPHNWLCDEEMDCSTDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+P + D ST +V N D+ + + C P + RC + C+ +
Sbjct: 2885 -VPGGF------DASTRRVVLECIGPNGDKKTSVIYIDTS--CQPGQRRCPGGD-CIFVG 2934
Query: 358 KFCDGKPDCSNGEDEGP 374
+FCDG P C +G DE P
Sbjct: 2935 QFCDGIPHCPDGYDERP 2951
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNTCIHQCFNGQVQCALSKK 257
++ C P + C G CI + C+G DC DGSDE P+ I C Q C LS +
Sbjct: 1543 LIDSPCAPMETMCRDGTCIRNEYLCNGRADC-PDGSDEKAPHCEIPDCSPAQFAC-LSGE 1600
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CIP + C+ DC D +DE D +C Q C S +CI N C+ DC
Sbjct: 1601 CIPASLKCNGREDC-----YDGSDE-VDCPTRCRPDQFMC-FSGECIASNQRCNGFRDC 1652
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 79/218 (36%), Gaps = 50/218 (22%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFKRILNGTHTLALEF 62
C GQ C + +CIP +CD +DC D +DED + R++ G
Sbjct: 2520 CPEGQFSCP-NGQCIPTTAICDGRIDCP-----DGSDEDRAYCAVDLRVIPG-------- 2565
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
+I + V C + P + P+ + + ++R +V
Sbjct: 2566 --------YIYVEPYRPVEFVC----------ETNLPSVQPMVRFADGRTIESDSRF-IV 2606
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH------PNELRCGSSN 176
T+ P+ + D+ + +E G VL H NE RC
Sbjct: 2607 TR----PTPQRVVVRADVGLSGRENNTRIECYTTTGLRREVLIHVHSNCSSNEYRC-RDG 2661
Query: 177 QCVALSKFCDGKPDCSNGEDEGP-FC---NAECTPGQF 210
C FC+G+PDC +G DE P FC TPG
Sbjct: 2662 TCRPRDDFCNGRPDCPDGSDEDPRFCIPSGVRVTPGAI 2699
>gi|148231249|ref|NP_001091034.1| low-density lipoprotein receptor-related protein 8 precursor [Bos
taurus]
gi|88605122|gb|AAR12912.1| low density lipoprotein receptor-related protein 8 [Bos taurus]
Length = 829
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DC D SDE + C + C + CI W
Sbjct: 41 ECDENQFRCRNERCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCN-NGHCIRERW 98
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E DC D D ++ K C ++ C S KC+P +W CD E DC +
Sbjct: 99 KCDGEEDCP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCES---- 151
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 152 -GADE---AGCATSLGTCRGDEFQCGDGT-CVPAIKRCNQEQDCPDGSDETGCLQGLNEC 206
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 207 LHNNGGCSHICTDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCE 266
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C AV S+IF++ ++RRI L
Sbjct: 267 CHPGYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 303
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EK+G++G R LV+ I+WP+ + +D LYW DS L+ + S+ G + +
Sbjct: 427 FQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKM 486
Query: 164 L 164
L
Sbjct: 487 L 487
>gi|397487993|ref|XP_003815060.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Pan paniscus]
Length = 700
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 129/287 (44%), Gaps = 23/287 (8%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+GP EC QF C +CIP W+CD DCL D SDE + C + C +
Sbjct: 41 QGP--AKECEKDQFQCRNKRCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NG 96
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMD 315
CI W CD E +C D D ++ K C ++ C S KC+P +W CD E D
Sbjct: 97 HCIHERWKCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKD 153
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DE + + C +E +CG CV K C+ + DC +G DE
Sbjct: 154 CEG-----GADE---AGCATSLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGC 204
Query: 376 CNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNT 432
+C N CSH C+ G C CPAG Q ++ C D DEC +C Q C N
Sbjct: 205 LQGLNECLHNNGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDECKDPDACSQICVNY 264
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 265 KGYFKCECYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 308
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 435 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 492
>gi|291242829|ref|XP_002741308.1| PREDICTED: low density lipoprotein receptor-related protein 1-like
[Saccoglossus kowalevskii]
Length = 631
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 139/303 (45%), Gaps = 28/303 (9%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+ C ++ RC + +C+ CD DC + DE CT +F C +CI W
Sbjct: 345 ITCEESQFRCDNF-RCIPQRFLCDHDNDCGDRSDEEGCTPRPCTVSEFRCSNDRCITNRW 403
Query: 223 KCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
KCDG DC DGSDE + C C + + QC + CI W CD + DC +D +D
Sbjct: 404 KCDGEDDC-GDGSDELGDNCAPTCSSAEFQCN-NGHCIAAEWKCDGDADC-----LDGSD 456
Query: 282 E-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
E D C + QC + C P W CD + DC +DN+DED + + C
Sbjct: 457 EMDCMDIRVCELNEFQCK-NTLCRPLEWRCDGDNDC-----LDNSDEDPEMC---GQIPC 507
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN--LKCS-HKCSPTPRG 397
P++ RC +N C+A CDG C +G DE CE+ KC+ H+C P P
Sbjct: 508 PPDKFRC-RNNICIASFLVCDGTDQCGDGSDEECDPTEPPRCESYEFKCANHRCIPAPFE 566
Query: 398 AMCFCPAGQNPNKTQC----VDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G ++ C VD ++CL+ +G C Q C YVC C +GY L+ D +
Sbjct: 567 CDNEDDCGDLSDELNCTRPGVDDNQCLVNNGGCHQQCRQIQGGYVCECNDGYQLKDDRIT 626
Query: 453 CTA 455
C
Sbjct: 627 CGG 629
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 105/212 (49%), Gaps = 22/212 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C PN+ +C +C+ S CDG C +GEDE C +F C +CIP WK
Sbjct: 224 CMPNQFKCEQEQKCIMASLRCDGTNHCESGEDEANCEAVTCEADRFQCETTRRCIPTVWK 283
Query: 224 CDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC D SDEP TC C + QC + +CIP +W C+ DD DN+DE
Sbjct: 284 CDGDNDC-GDNSDEPPTCRTRTCGPDEFQCVENGRCIPMSWRCN-----GYDDCGDNSDE 337
Query: 283 DWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
D Q C Q +C + +CIP +LCD + DC D +DE+ C
Sbjct: 338 PADHCEQITCEESQFRCD-NFRCIPQRFLCDHDNDCG-----DRSDEE-----GCTPRPC 386
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E RC S+++C+ CDG+ DC +G DE
Sbjct: 387 TVSEFRC-SNDRCITNRWKCDGEDDCGDGSDE 417
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 113/230 (49%), Gaps = 26/230 (11%)
Query: 149 NTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTP 207
N ES + + AV C + +C ++ +C+ CDG DC + DE P C C P
Sbjct: 248 NHCESGEDEANCEAVTCEADRFQCETTRRCIPTVWKCDGDNDCGDNSDEPPTCRTRTCGP 307
Query: 208 GQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWL 264
+F C G+CIP SW+C+G+ DC D SDEP Q C Q +C + +CIP +L
Sbjct: 308 DEFQCVENGRCIPMSWRCNGYDDC-GDNSDEPADHCEQITCEESQFRCD-NFRCIPQRFL 365
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 322
CD + DC D +DE+ C + +C+ + +CI + W CD E DC +D++
Sbjct: 366 CDHDNDCG-----DRSDEEGCTPRPCTVSEFRCS-NDRCITNRWKCDGEDDCGDGSDELG 419
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN A C E +C ++ C+A CDG DC +G DE
Sbjct: 420 DNC-----------APTCSSAEFQC-NNGHCIAAEWKCDGDADCLDGSDE 457
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 109/247 (44%), Gaps = 20/247 (8%)
Query: 130 SSLVIDYNQDILYW--CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDG 187
S V ++ I +W CD+ + + +C + +C + C+ + CDG
Sbjct: 148 SQFVCSNDKCIPFWWKCDNEDDCGDESDEPADCRPFVCQAGQFQC-DNKHCLNPAFLCDG 206
Query: 188 KPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
DC + DE + C P QF C KCI S +CDG C E G DE N C
Sbjct: 207 DNDCGDNSDEQNCQHHTCMPNQFKCEQEQKCIMASLRCDGTNHC-ESGEDEANCEAVTCE 265
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIP 305
+ QC +++CIP W CD + DC DN+DE + C + QC + +CIP
Sbjct: 266 ADRFQCETTRRCIPTVWKCDGDNDCG-----DNSDEPPTCRTRTCGPDEFQCVENGRCIP 320
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W C+ DD DN+DE D + C ++ RC + +C+ CD D
Sbjct: 321 MSWRCN-----GYDDCGDNSDEPADHC---EQITCEESQFRCDNF-RCIPQRFLCDHDND 371
Query: 366 CSNGEDE 372
C + DE
Sbjct: 372 CGDRSDE 378
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFN 247
PD + G C + C+ QF C KCIP WKCD DC D SDEP C C
Sbjct: 129 PDSFYLANNGRTCLSNCSASQFVCSNDKCIPFWWKCDNEDDC-GDESDEPADCRPFVCQA 187
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
GQ QC +K C+ +LCD + DC DN+DE + H C Q +C +KCI +
Sbjct: 188 GQFQCD-NKHCLNPAFLCDGDNDCG-----DNSDEQNCQHHTCMPNQFKCEQEQKCIMAS 241
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
CD C + + N + AV C + +C ++ +C+ CDG DC
Sbjct: 242 LRCDGTNHCESGEDEANCE----------AVTCEADRFQCETTRRCIPTVWKCDGDNDCG 291
Query: 368 NGEDEGPFCNNKA 380
+ DE P C +
Sbjct: 292 DNSDEPPTCRTRT 304
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 17 KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQ 74
+CI + W CD E DC +D++ DN + NG H +A E+ + C
Sbjct: 397 RCITNRWKCDGEDDCGDGSDELGDNCAPTCSSAEFQCNNG-HCIAAEWKCDGDADCLDGS 455
Query: 75 QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVI 134
+ + +R ++N+ L P ++W
Sbjct: 456 DEMDCMDIRVCELNEFQCKNTLCRP--------------------------LEW----RC 485
Query: 135 DYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
D + D L N+ E + G + C P++ RC +N C+A CDG C +G
Sbjct: 486 DGDNDCLD------NSDEDPEMCGQ---IPCPPDKFRC-RNNICIASFLVCDGTDQCGDG 535
Query: 195 EDE--GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
DE P C +F C +CIP ++CD DC D SDE N
Sbjct: 536 SDEECDPTEPPRCESYEFKCANHRCIPAPFECDNEDDC-GDLSDELN 581
>gi|194908372|ref|XP_001981759.1| GG12224 [Drosophila erecta]
gi|190656397|gb|EDV53629.1| GG12224 [Drosophila erecta]
Length = 1079
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 150/366 (40%), Gaps = 85/366 (23%)
Query: 156 VDGSHNAV-----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQ 209
DGS A+ LC + C + QCV CDG DC +G DE + C+P Q
Sbjct: 267 ADGSDEAMSLCLGLCAYTMVMCNNGEQCVHREFMCDGDEDCRDGSDEWNCGRSLTCSPEQ 326
Query: 210 FSC--GMGKCIPESWKCDGFVDCLEDGSDEP---------------NTCIHQCFNG---- 248
F+C G G+CIP SW CD DC DGSDE CI F
Sbjct: 327 FACKSGEGECIPLSWMCDQAKDC-RDGSDEAQCNMTCRSDEFTCGNGRCIQNRFKCDDDD 385
Query: 249 -------------QVQCAL------SKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDKFH 288
+++C S CIP+ W+CD E DC +D + N DKF+
Sbjct: 386 DCGDGSDEKNCGDKLKCQAHEFTCNSGMCIPNQWVCDGEADCRNGEDEMHNCT--VDKFN 443
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELR 346
C + + QC+ C+ +W+CD + DC D DE N V C P++ +
Sbjct: 444 FCQSHEFQCSDRITCLEKSWVCDGDPDCP-----DGEDE-----LPPNCVKLACRPDQFQ 493
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR----GAMCF- 401
C + C++ C+G DC++G DE DC C+ T G +C
Sbjct: 494 C-DDHTCISGFLTCNGDRDCADGSDE-------KDCNIAAAPKTCNATSEFDCGGGLCIA 545
Query: 402 ----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
CP G++ +C + L +G C C N + Y C C EGY L D
Sbjct: 546 NAKVCDRRKDCPNGEDEPAGKCGINECSLKNGGCMHRCVNLEVGYRCECNEGYKLDADQH 605
Query: 452 SCTAVN 457
+C ++
Sbjct: 606 TCVDID 611
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 108/245 (44%), Gaps = 46/245 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S+ +C+ + CDG DC + DE F + C+ QF CG GKCI
Sbjct: 198 CDEKQFQC-STGECIPIRFMCDGFSDCPDHSDERLEECKFTESTCSQDQFRCGNGKCITN 256
Query: 221 SWKCDGFVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE + C+ C V C ++C+ ++CD + DC D
Sbjct: 257 RWVCDRENDC-ADGSDEAMSLCLGLCAYTMVMCNNGEQCVHREFMCDGDEDCR-----DG 310
Query: 280 TDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFS 334
+DE W+ + C Q C + +CIP +W+CD+ DC +D+ N D++
Sbjct: 311 SDE-WNCGRSLTCSPEQFACKSGEGECIPLSWMCDQAKDCRDGSDEAQCNMTCRSDEFTC 369
Query: 335 HNA---------------------------VLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
N + C +E C +S C+ CDG+ DC
Sbjct: 370 GNGRCIQNRFKCDDDDDCGDGSDEKNCGDKLKCQAHEFTC-NSGMCIPNQWVCDGEADCR 428
Query: 368 NGEDE 372
NGEDE
Sbjct: 429 NGEDE 433
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
R+E+AGM G +R+ ++T +++WP+ + +D Q LYW D LNT+ S DGS
Sbjct: 794 RIERAGMDGSHRTAIITYDVKWPNGITLDLVQKRLYWVDGKLNTISSANYDGSQ 847
>gi|332809041|ref|XP_003308159.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 3 [Pan troglodytes]
Length = 697
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 43 ECEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 100
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 101 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG---- 153
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 154 -GADE---AGCATSLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNEC 208
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 209 LHNNGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCE 268
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C A + S+IF++ ++RRI L
Sbjct: 269 CYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 305
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 432 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 489
>gi|119627149|gb|EAX06744.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_e [Homo sapiens]
gi|119627150|gb|EAX06745.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_e [Homo sapiens]
Length = 700
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 ECEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG---- 156
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 157 -GADE---AGCATSLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNEC 211
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 212 LHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCE 271
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C A + S+IF++ ++RRI L
Sbjct: 272 CYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 308
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 435 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 492
>gi|345314268|ref|XP_003429480.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Ornithorhynchus anatinus]
Length = 1098
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 170/453 (37%), Gaps = 143/453 (31%)
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVL--------CHPNELRCGSSNQCVALSKFCDG 187
+ + +++ D H ++ + DGS + C PN C S +C+ S CD
Sbjct: 153 HGANRIFFSDIHFGNIQQINDDGSGRVTVVESVKRPRCPPNYFAC-PSGRCIPTSWTCDK 211
Query: 188 KPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC------ 241
+ DC +GEDE CN C+ QF C +CI + W CDG DC DGSDE C
Sbjct: 212 EDDCEHGEDEA-HCNQFCSAAQFECHNHRCISKLWLCDGTDDC-GDGSDEDGRCQGTTCS 269
Query: 242 --------IHQCF------NGQVQCA-------------------------LSKKCIPHN 262
H C +G C+ S +CIP +
Sbjct: 270 LTSFSCPGTHVCVPTHWLCDGDRDCSDGADESVAAGCLYNSSRCDAREFACQSGQCIPKH 329
Query: 263 WLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++CD + DC D +DE + ++ C + +CA + W CD E D
Sbjct: 330 FVCDRDRDCP-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGEF-----DC 379
Query: 322 VDNTDE------------------------DWDKYF---------SHNAVLC-------- 340
D++DE W S VL
Sbjct: 380 HDHSDEAPKNPACSSPGGHGSGAHGSRRVGGWAPQMPTLLPAWGASGGRVLPLWALTLPP 439
Query: 341 ----HPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHK 390
HP E RC +S +CV + CDG+ DC +G DE L C +
Sbjct: 440 GPGPHPTEHRCNASMFLCANGRCVGEGQLCDGQNDCGDGSDE------------LNCHCR 487
Query: 391 CSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP-D 449
C P R + CVD DEC C Q C NT SY C C +GY R D
Sbjct: 488 CRPGFR---------LKDDGKTCVDVDECSTTFPCSQRCVNTAGSYKCLCVDGYRPRAGD 538
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC AV DE +IF++ +R+++L+GS
Sbjct: 539 PHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 568
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + +C S+ C + CDG DC + DE C+ +FSC G+CI WKC
Sbjct: 886 CRPGQFQC-STGICTNPAFICDGDNDCQDNSDEANCAPRPCSESEFSCANGRCIAGRWKC 944
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DED
Sbjct: 945 DGDHDC-ADGSDEKD-CSPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDED- 995
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ +
Sbjct: 996 ----TCNTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPELCARFQ-- 1044
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C PN RC + C+ + + CDG C +G DE
Sbjct: 1045 -CPPNRPFRCKNDRVCLWIGRQCDGVNHCGDGSDE 1078
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 97/200 (48%), Gaps = 19/200 (9%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
++C+ CD + DC + DE C +C PGQF C G C ++ CDG DC +D
Sbjct: 856 DKCIPFWWKCDTEDDCGDRSDEPSDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QDN 914
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE N C + CA + +CI W CD + DC+ D +DE D +C Q
Sbjct: 915 SDEANCAPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDEK-DCSPRCDMDQ 967
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
QC S CIP W CD + DC +D +DED + C +E +C ++ C
Sbjct: 968 FQCK-SGHCIPLRWRCDADADC-----MDGSDED---TCNTGVRTCPLDEFQC-NNTLCK 1017
Query: 355 ALSKFCDGKPDCSNGEDEGP 374
L+ CDG+ DC + DE P
Sbjct: 1018 PLAWKCDGEDDCGDNSDENP 1037
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 149/402 (37%), Gaps = 110/402 (27%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L++S L P +D R
Sbjct: 622 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSS-GLREPRALVVDVRHGYL 680
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVID---------------------- 135
+ + GM G +RS +V I WP+ L +D
Sbjct: 681 YWTDWGDHSLIGRIGMDGSSRSVVVDTRITWPNGLTLDSVNDRIYWADAREDYIEFAMLS 740
Query: 136 ----------YNQDILYWCDSHLNTVESV-RVDGSHNAVLC------------------- 165
+D +YW D ++ + G++ +L
Sbjct: 741 QDVPHIFALTLFEDFVYWTDWETKSISRAHKTSGANQTLLISTLHRPMDLHVFHALRQPD 800
Query: 166 ---HPNE-----------LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
HP + L G +QC + F G +G C + CT QF
Sbjct: 801 VPDHPCKVDNGGCSNLCLLSPGGRHQCACPTNFYLGG--------DGRTCVSNCTASQFV 852
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMD 270
C KCIP WKCD DC D SDEP+ C +C GQ QC+ + C ++CD + D
Sbjct: 853 CKNDKCIPFWWKCDTEDDC-GDRSDEPSDCPEFKCRPGQFQCS-TGICTNPAFICDGDND 910
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C DN+DE C + CA + +CI W CD + DC+ D +DE
Sbjct: 911 CQ-----DNSDEANCAPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE--- 956
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C ++ +C S C+ L CD DC +G DE
Sbjct: 957 ---KDCSPRCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 994
>gi|390465970|ref|XP_002807051.2| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8 [Callithrix jacchus]
Length = 958
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/335 (30%), Positives = 141/335 (42%), Gaps = 45/335 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C A C P +F CG C+ +
Sbjct: 124 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCAALCAPHEFQCGNRSCLAAVF 182
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
D E G +P C + +C CIP W+CD + DC D
Sbjct: 183 VCDGDDDCGDGSDERGCADP-----ACGPREFRCG-GGACIPERWVCDRQFDCE-----D 231
Query: 279 NTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+DE + + G S +C+ W CD + DC D +DE
Sbjct: 232 RSDEAAELCGRAGPGATSTPAACVPAAQFACRSGECVHLGWRCDGDRDCK-----DKSDE 286
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENL 385
C +E +CG CV K C+ + DC +G DE +C N
Sbjct: 287 -----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNHEQDCPDGSDEAGCLQGLNECLHNNG 340
Query: 386 KCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C+ G C CPAG Q +K C D DEC +C Q C N + C C GY
Sbjct: 341 GCSHICTDLKNGFECTCPAGFQLLDKKTCGDIDECEDPDACSQICVNYKGYFKCECYPGY 400
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C A + S+IF++ ++R+I L
Sbjct: 401 EMDLLTKNCKAA---AGKSPSLIFTNRHEVRKIDL 432
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 559 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKRL 616
>gi|341881877|gb|EGT37812.1| hypothetical protein CAEBREN_19572 [Caenorhabditis brenneri]
Length = 757
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/302 (31%), Positives = 134/302 (44%), Gaps = 48/302 (15%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
E CG+ +C+ + CD DC NG DE +C+ GQ C G C+P +KCDG
Sbjct: 33 EFDCGT--ECIPRTWECDNMKDCQNGADEFDCEPNDCSEGQMLCDNGVCVPGIYKCDGHR 90
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
DC D SDE C H + + + N D +DK +
Sbjct: 91 DCY-DNSDE------------------WFCTSHFIRQNSSFNFGDPNHYKN-DGGYDK-N 129
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---------DWDKYFSHNAVL 339
C G C + + CIP+ CD DC + + DE D K+F
Sbjct: 130 GCLPGFGLCGVQQLCIPNQLFCDGNTDC----VHEEEDELHCTPGGPVDKKKFFWEYLNP 185
Query: 340 CHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C N +C +N +C+ ++ C+GK +C G+DE C ++C C ++C T
Sbjct: 186 CD-NLFQCKKNNFWDDQKCINQTELCNGKKECPLGDDESDKC---SECSTKNCEYQCRNT 241
Query: 395 PRGAMCFCPAGQ--NPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
P G C C G N + CV+ DEC L + +C C NT S+ CSC +GY L+ DGK
Sbjct: 242 PTGPKCVCEKGYRLNSDGVSCVEIDECTLPERACHHFCENTIGSFRCSCAKGYHLKADGK 301
Query: 452 SC 453
+C
Sbjct: 302 TC 303
>gi|198429585|ref|XP_002120725.1| PREDICTED: similar to alpha-2-macroglobulin receptor [Ciona
intestinalis]
Length = 989
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 110/251 (43%), Gaps = 54/251 (21%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-----GMGKCI 218
+C P + RC +C+ CDGK DC GEDE C+ ++ C CI
Sbjct: 589 VCLPTQFRCSHPPKCILRMFRCDGKKDCDQGEDEIGCAPVSCSSTEYECQPSPNNETSCI 648
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------- 271
P WKCDG VDC G DE N + C + +++C+ + CI +W CD E DC
Sbjct: 649 PSRWKCDGDVDCYH-GDDETNCTVTTCMDSEMKCSNTGPCISKSWACDGENDCRDGSDEL 707
Query: 272 ------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
S +D DN+DE C +G++ C ++
Sbjct: 708 PSICGNKTCNSDHFMCGNGILCIPNSWVCDSDNDCGDNSDERNCTNTPCASGEISCTFTQ 767
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+C+ + CD + DC +D +DE + H V C+ ++ RC C+ LS CD
Sbjct: 768 QCVKKSAKCDGKYDC-----LDQSDE----LYCH--VTCNKDQFRCEKPPLCIPLSYKCD 816
Query: 362 GKPDCSNGEDE 372
G P C+NG DE
Sbjct: 817 GVPHCNNGTDE 827
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 96/225 (42%), Gaps = 34/225 (15%)
Query: 163 VLCHPNELRCGSS-----NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-K 216
C P +C ++ N C++ S CDG P C++G DE + C P QF C K
Sbjct: 543 FFCTPGMYQCANTTKYTNNSCISPSAICDGTPQCTDGSDELNCDHHVCLPTQFRCSHPPK 602
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS 272
CI ++CDG DC + G DE C + + +C S CIP W CD ++DC
Sbjct: 603 CILRMFRCDGKKDC-DQGEDEIGCAPVSCSSTEYECQPSPNNETSCIPSRWKCDGDVDCY 661
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-----TDDIVDNTDE 327
D DE C + +++C+ + CI +W CD E DC I N
Sbjct: 662 HGD-----DETNCTVTTCMDSEMKCSNTGPCISKSWACDGENDCRDGSDELPSICGNKTC 716
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ D + N +LC PN C S N DC + DE
Sbjct: 717 NSDHFMCGNGILCIPNSWVCDSDN-------------DCGDNSDE 748
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C E+ C + QCV S CDGK DC + DE +C+ C QF C CIP S+K
Sbjct: 756 CASGEISCTFTQQCVKKSAKCDGKYDCLDQSDE-LYCHVTCNKDQFRCEKPPLCIPLSYK 814
Query: 224 CDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG C +G+DE N T C N C + CIPH W CD E+DC D +
Sbjct: 815 CDGVPHC-NNGTDEINCKGTASKCCGNATFTC-MDGACIPHVWKCDGELDCP-----DGS 867
Query: 281 DED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST--DDIVDNTDEDWDKYFSHN 336
DE F + +C C+P N LCD +C + DD + + D Y H+
Sbjct: 868 DEGPVCSVFQCPPDRPYRCHTQDICLPLNKLCDGINNCGSHNDDETTSVCKAADTYAGHS 927
Query: 337 AVLCH---------------PNELR----CGSSNQCVALSKFCDGKPDCSNGEDE 372
A H PN + SS +C S CDG +C +G DE
Sbjct: 928 ANSTHCLLWRKHLGSRSGNPPNPVGEHGFVCSSGECTPYSTLCDGVENCEDGSDE 982
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 162/415 (39%), Gaps = 97/415 (23%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLV-IDYNQDILYWCD-SHLN 149
D A ++F D + + + G N + +V S + I +D +YW D S +
Sbjct: 360 DYAARKLFWADAKEGYIAHCDLDGANAAIVVQSPDNRDSRIFSISLFEDSIYWTDWSQTS 419
Query: 150 TVESVRVDGSHNAVLCHP--------------NELR---CGSSNQCVALSKFCD------ 186
+ S + HN HP + LR S + C+ + C
Sbjct: 420 IMTSYKFRSIHNTTNVHPIHKVVHIPMDLKVVHPLRQPMPASPHPCLINNGDCSDLCLLS 479
Query: 187 --GKPDCSNGED-----EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
G CS E+ +G C C+ +F C KCIP WKCD DC D SDEP+
Sbjct: 480 PGGGKSCSCPENFILQKDGISCVQNCSFSEFVCKNHKCIPFWWKCDTVDDC-GDYSDEPD 538
Query: 240 TCIH-QCFNGQVQCALSKK-----CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
C H C G QCA + K CI + +CD C+ D +DE H C
Sbjct: 539 HCRHFFCTPGMYQCANTTKYTNNSCISPSAICDGTPQCT-----DGSDELNCDHHVCLPT 593
Query: 294 QVQCALSKKCIPHNWLCDEEMDC-STDDIVD----------------------------N 324
Q +C+ KCI + CD + DC +D +
Sbjct: 594 QFRCSHPPKCILRMFRCDGKKDCDQGEDEIGCAPVSCSSTEYECQPSPNNETSCIPSRWK 653
Query: 325 TDEDWDKYFSHN-----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNN 378
D D D Y + C +E++C ++ C++ S CDG+ DC +G DE P C N
Sbjct: 654 CDGDVDCYHGDDETNCTVTTCMDSEMKCSNTGPCISKSWACDGENDCRDGSDELPSICGN 713
Query: 379 KA-DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNT 432
K + ++ C + G +C PN C D+D D S ++ CTNT
Sbjct: 714 KTCNSDHFMCGN-------GILCI------PNSWVC-DSDNDCGDNSDERNCTNT 754
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 87/193 (45%), Gaps = 13/193 (6%)
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
++C +C H W CD +MDCS D TDE D S + C + + CG+ + C
Sbjct: 1 MLECKSDAECYMHEWKCDGDMDCS-----DGTDE-MDCPPSPTSA-CPVDHIPCGNGS-C 52
Query: 354 VALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNK 410
+ LSK C+ DC++G DE F N + ++ +C C C C G + +
Sbjct: 53 INLSKACNNVSDCTDGADEKLCFVNECENKQSNRCQQLCINRDYSYKCGCRPGFQLSTDG 112
Query: 411 TQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
C + +EC I C Q C +Y CSC Y P + EP I+F+
Sbjct: 113 YSCSEINECAHIVPPCSQICEKYPNTYECSCAPSYYRDPLNRRNCKAGSHTGEPY-ILFA 171
Query: 470 STVDIRRIHLNGS 482
+ +R++ LNGS
Sbjct: 172 NEYFLRQLSLNGS 184
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
L C S +C CDG DCS+G DE P + C CG G CI S C+
Sbjct: 2 LECKSDAECYMHEWKCDGDMDCSDGTDEMDCPPSPTSACPVDHIPCGNGSCINLSKACNN 61
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQ 249
DC DG+DE +++C N Q
Sbjct: 62 VSDCT-DGADEKLCFVNECENKQ 83
>gi|162462084|ref|NP_001104810.1| lipophorin receptor isoform 3 precursor [Bombyx mori]
gi|84469400|dbj|BAE71408.1| lipophorin receptor [Bombyx mori]
Length = 882
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/375 (30%), Positives = 149/375 (39%), Gaps = 82/375 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI---- 218
++C C S C+ S CD DC +G DE C+ C +F+CG GKCI
Sbjct: 133 MVCQEYRFECLSDGLCIPRSWRCDATADCPDGSDEHQ-CDETCRSDEFTCGNGKCIQMRW 191
Query: 219 -----------------------PES-------------WKCDGFVDCLEDGSDEPNTCI 242
P+S W CDG VDC DGSDE C+
Sbjct: 192 VCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCISAWWHCDGDVDCA-DGSDEVG-CV 249
Query: 243 HQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
C + + +C C+ W+CD + DC D DE C G V
Sbjct: 250 STPKVRSPCISTEFECNDRITCVHRAWVCDGDHDCP-----DGGDE---ALELC-RGNVT 300
Query: 297 CALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGS 349
C L + CIP C+ DC D +DE + +C E CG
Sbjct: 301 CRLDQFQCKDHSCIPGALYCNGVKDCP-----DGSDE---HNCTRQKTICDKRTEFDCGG 352
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN 407
C+ L+K CD DC N EDE + +CE N CS +C TP C C G
Sbjct: 353 G-MCIPLAKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIAYYCDCEKGYK 411
Query: 408 --PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS 465
N+T C D DEC GSC Q C N ++ C C GY P + T + P S
Sbjct: 412 LIDNRT-CEDIDECADPGSCSQICINEKGTFKCECHTGYARDPRDR--TRCKATEGHP-S 467
Query: 466 IIFSSTVDIRRIHLN 480
++F+ DIR+I L+
Sbjct: 468 LLFARKHDIRKISLD 482
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 140/381 (36%), Gaps = 96/381 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + +C ++ +C+ ++ C+G DC + DE E CT +F C G+CIP S
Sbjct: 50 CPMKQFQC-ANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCKTGRCIPLS 108
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCD DC + ++P C C + +C CIP +W CD DC
Sbjct: 109 WKCDNEKDCSDSSDEDPTVCTATKMVCQEYRFECLSDGLCIPRSWRCDATADCPDGSDEH 168
Query: 279 NTDED--WDKFHQCFNG--------------------QVQCALSK------------KCI 304
DE D+F C NG +V+C +CI
Sbjct: 169 QCDETCRSDEF-TCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFSCTDGQCI 227
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
W CD ++DC+ D +DE C E C CV + CDG
Sbjct: 228 SAWWHCDGDVDCA-----DGSDEVGCVSTPKVRSPCISTEFECNDRITCVHRAWVCDGDH 282
Query: 365 DCSNGEDE--------------------------GPFCNNKADCENLKCSHKCSPTPR-- 396
DC +G DE +CN DC + H C+
Sbjct: 283 DCPDGGDEALELCRGNVTCRLDQFQCKDHSCIPGALYCNGVKDCPDGSDEHNCTRQKTIC 342
Query: 397 ---------GAMCF-----------CPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
G MC CP ++ + +C + + +G C Q C +T ++Y
Sbjct: 343 DKRTEFDCGGGMCIPLAKVCDKHVDCPNFEDEPRDRCGENECEKNNGGCSQRCVDTPIAY 402
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
C C +GY L D ++C ++
Sbjct: 403 YCDCEKGYKL-IDNRTCEDID 422
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCI 259
N C QF C GKCIP +W C+G DC ++ + C C + + +C + +CI
Sbjct: 47 NGACPMKQFQCANGKCIPMTWVCEGDDDCGDNSDESIEECKESRTCTSSEFRCK-TGRCI 105
Query: 260 PHNWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
P +W CD E DCS D++DED C + +C CIP +W CD D
Sbjct: 106 PLSWKCDNEKDCS-----DSSDEDPTVCTATKMVCQEYRFECLSDGLCIPRSWRCDATAD 160
Query: 316 CSTDDIVDNTDED--WDKYFSHNAV--------------------------LCHPNELRC 347
C DE D++ N C P
Sbjct: 161 CPDGSDEHQCDETCRSDEFTCGNGKCIQMRWVCDGDDDCGDDSDEVKCPTPTCQPQSHFS 220
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
+ QC++ CDG DC++G DE
Sbjct: 221 CTDGQCISAWWHCDGDVDCADGSDE 245
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AGM G +RS +V+ +++WP+ L +D + +YW D+ +NT+ S DGS ++ H
Sbjct: 605 KIERAGMDGSHRSTIVSYDVKWPNGLTLDLVRQRVYWVDAKMNTISSCNYDGSGRRLILH 664
Query: 167 PNEL 170
E+
Sbjct: 665 STEV 668
>gi|402854612|ref|XP_003891958.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Papio anubis]
Length = 901
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 141/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCVTLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGRDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE CH NE +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCHGNEFQCGDGT-CVLAIKRCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
>gi|195164031|ref|XP_002022852.1| GL16506 [Drosophila persimilis]
gi|194104914|gb|EDW26957.1| GL16506 [Drosophila persimilis]
Length = 3916
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 150/364 (41%), Gaps = 77/364 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 2096 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 2155
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 2156 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 2209
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 2210 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 2262
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 2263 TTLHNCATQQPCGEDMFTCGNG-RCINKGWLCDHDNDCGDGTDEGKFCNSKYKTCSPQEF 2321
Query: 382 -CENLKC---SHKCSPTP-----------RGAMCFCPAGQNP-NKTQCVD---------- 415
C+N KC ++C + CP GQ QC+D
Sbjct: 2322 TCQNFKCIRNQYRCDGEDDCGDHSDEVNCKKDNVTCPQGQFACTNGQCIDYSLVCNKYPD 2381
Query: 416 ------------ADEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
DEC + C C +T SY C C EGY L DGK+C V+ +
Sbjct: 2382 CSDESDEPAHCNVDECAKVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLE 2441
Query: 462 EPAS 465
+P +
Sbjct: 2442 QPGA 2445
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/345 (32%), Positives = 155/345 (44%), Gaps = 53/345 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK- 216
C + C + N C+ CDG DC + DE C+ E +F+C K
Sbjct: 2181 CFGDLFTCDNGN-CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKS 2236
Query: 217 -----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLC 265
CIP+ W CDG DC+ DG+DE NT +H C Q C + +CI WLC
Sbjct: 2237 WQRAQCIPKKWICDGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWLC 2293
Query: 266 DEEMDCSTDDIVDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D + DC D TDE K+ C + C + KCI + + CD E DC
Sbjct: 2294 DHDNDCG-----DGTDEGKFCNSKYKTCSPQEFTCQ-NFKCIRNQYRCDGEDDCG----- 2342
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--A 380
D++DE K + V C + C ++ QC+ S C+ PDCS+ DE CN A
Sbjct: 2343 DHSDEVNCK---KDNVTCPQGQFAC-TNGQCIDYSLVCNKYPDCSDESDEPAHCNVDECA 2398
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYV 437
E +C HKC T C C G + C D DECL G+C Q C+NT S+
Sbjct: 2399 KVEINQCGHKCVDTLTSYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGSFY 2458
Query: 438 CSCTEGYTLRP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C C E Y R D +C + + P +IF++ +R + ++G
Sbjct: 2459 CKCDETYYERQNDEHTCKRKD---NIPPWLIFTNKYYVRNMSVDG 2500
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 158/372 (42%), Gaps = 81/372 (21%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKC 224
+ +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI W+C
Sbjct: 3020 DFKCGN-NRCIPKQWMCDFADDCGDATDENEAICKGRYRECSESEFRCGNGKCISSRWQC 3078
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------- 271
D DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 3079 DHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVGCPPRF 3136
Query: 272 --------------------------STDDIVDNTDEDWD---KFHQCFNGQVQCALSKK 302
TDD D +DED + F+ + QCA + +
Sbjct: 3137 PGGRYCPESRFQCNNNLCVSLSDLCDGTDDCGDGSDEDPNVCSDFNCDTLRRFQCA-NHR 3195
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ-------CVA 355
C+ +CD D+ D +DE+ N LC + C Q C+
Sbjct: 3196 CVARYQICD-----GVDNCGDGSDEN-------NMTLCASKQKPCDLYTQFQCANKHCIE 3243
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG---QNP 408
S+ CD DC++ DE C++ A C C H C + T G +C C G +
Sbjct: 3244 RSQVCDFSDDCTDASDE-LGCHHTASCSEQNRGGCQHHCHNLTDGGYICTCYPGYIISHD 3302
Query: 409 NKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E ++
Sbjct: 3303 NKKRCADVDECLTRQHTCSHQCHNLNGTYSCSCREGFRL-ADGAS--GVCRAEKEDVVLV 3359
Query: 468 FSSTVDIRRIHL 479
F++ +IR + L
Sbjct: 3360 FANGQEIRGLDL 3371
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +C+ S CDG DC + DE C C +F C G+CIP++++CD DC
Sbjct: 301 TNQRCIPKSWVCDGDDDCLDNSDEEQNCTKPTCGSNEFQCRSGRCIPQNFRCDQENDC-G 359
Query: 233 DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCF 291
D SDE + C Q CA + +CIP+ W CD E DC D++DE D+ C
Sbjct: 360 DNSDELDCGNVTCGTSQFACA-NGRCIPNMWKCDSENDCG-----DSSDEGDFCAEKTCA 413
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q C + CIP +W+CD + DC D DE + C N+ +C
Sbjct: 414 YFQFTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK-----DCPPISCLTNQFKCSDLR 463
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
QCV S CDG PDC++G DE
Sbjct: 464 QCVEESYKCDGIPDCNDGSDE 484
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE +C S +C+ + CD + DC + DE N C QF+C G+CIP WKC
Sbjct: 333 CGSNEFQC-RSGRCIPQNFRCDQENDCGDNSDELDCGNVTCGTSQFACANGRCIPNMWKC 391
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
D DC D SDE + C + C Q C + CIP +W+CD + DC D DE
Sbjct: 392 DSENDC-GDSSDEGDFCAEKTCAYFQFTCPRTGHCIPQSWVCDGDDDC-----FDKQDEK 445
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-P 342
C Q +C+ ++C+ ++ CD DC+ D +DE S C+
Sbjct: 446 DCPPISCLTNQFKCSDLRQCVEESYKCDGIPDCN-----DGSDE--VGCLSMGLNQCNLE 498
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
RC S+ C+ ++ CDG S+ DE
Sbjct: 499 KHFRCKSTGFCIPIAWHCDGSTTASDHSDE 528
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 138/324 (42%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G NR LV I +P ++ + N +YW D L V N V
Sbjct: 1845 VREKIERSDLEGRNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 1901
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R S+ N C + C +GK +C + +E
Sbjct: 1902 EMVKRLEDSPRDIRIYSADRQKCDVNPCRINNGGCAQSCHPAPNGKAECKCDDNTKVVNE 1961
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 1962 GRMCAPRNNTCEASKFYCQNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 2021
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ C + +CIP +C+
Sbjct: 2022 -NGRCIFKSWKCDHENDCK-----DGSDELGCTYPPCVDGEFTCG-NGRCIPQAQVCNGV 2074
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 2075 NDCKDNATSDETHER-----CPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 2129
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 2130 PLHCGQRTCPTNSFRCPNHRCIPA 2153
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/226 (33%), Positives = 109/226 (48%), Gaps = 22/226 (9%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFS 211
R D + + C ++ +C SS +C+ S CDG DC +G DE P C P +F+
Sbjct: 2879 RSDEQNCELPCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFA 2938
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDE 267
C G+CIP+ W CD DC +D SDEP Q C G +C + +CIP CD
Sbjct: 2939 CKNGRCIPQLWMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDG 2997
Query: 268 EMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC DN+DE + +C +C + +CIP W+CD DC D TD
Sbjct: 2998 KDDCR-----DNSDELPENCPKCSAETDFKCG-NNRCIPKQWMCDFADDCG-----DATD 3046
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ + C +E RCG+ +C++ CD + DC + DE
Sbjct: 3047 EN-EAICKGRYRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 3090
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 96/207 (46%), Gaps = 20/207 (9%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 2818 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 2876
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 2877 GDRSDEQN-CELPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 2930
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + A + +CIP W+CD + DC D++DE N C RC G
Sbjct: 2931 CDPKTEFACKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 2982
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEGP 374
SN +C+ FCDGK DC + DE P
Sbjct: 2983 QSNYRCIPKWLFCDGKDDCRDNSDELP 3009
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 112/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+CG G+CIP++ C
Sbjct: 2013 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCTYPPCVDGEFTCGNGRCIPQAQVC 2071
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 2072 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 2126
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 2127 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 2186
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 2187 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 2239
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 2240 AQCIPKKWICDGDPDCVDGADENTTLHN 2267
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 125/319 (39%), Gaps = 61/319 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVL-- 164
+ A + G +R +++ N + P + D +YW D +L V + + G++ VL
Sbjct: 2672 IAYADLEGRHRHTVLSGN-RVPHVFALSLFDDFIYWSDWNLKAIVRANKFHGANYTVLRN 2730
Query: 165 -------CHPNE-LR-------CGSSNQCVALSKFCDGKPDCSNGEDEGPF--------- 200
H N LR CG++N + P+ + EG
Sbjct: 2731 TTHRPYDIHINHPLRQLPYTNPCGTNNGGCSHLCLIAPPPESTYLNIEGYIEEGAPIYKC 2790
Query: 201 --------------CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-H 243
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC
Sbjct: 2791 ACPNQFYLARDSKTCIANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPR 2849
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C G QC + C P +CD DD D +DE + C +C S +C
Sbjct: 2850 HCRAGTFQCK-NTNCTPSATICD-----GVDDCGDRSDEQNCEL-PCPLSDFKCKSSGRC 2902
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I +W CD + DC D +DED F C P + +C+ CD
Sbjct: 2903 ILDSWRCDGDADCK-----DGSDEDPAVCFKRT---CDPKTEFACKNGRCIPQLWMCDFD 2954
Query: 364 PDCSNGEDEGPFCNNKADC 382
DC + DE + + +C
Sbjct: 2955 NDCGDDSDEPAYMCRQRNC 2973
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 3508 KIEVSWMDGSKRRPLITEQIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSMRKAIV 3567
Query: 166 HPNELR 171
++LR
Sbjct: 3568 KGDQLR 3573
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA 162
L + ++ A + G + + ++ ++ P S+VI + D +Y D L+ + + ++ G
Sbjct: 138 LLDHVQHANLDGTDIKTVNSRLVRHPFSIVI--HNDWMYITDWRLDAIIRLHKLTGEQEE 195
Query: 163 VLCH-PNELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIP 219
++ P R G + + D +P N C A P + G + P
Sbjct: 196 MMVREPQTNRLYGVKVYSHEVQRIADTQPCNRNNGGCQKICFAVPIAPQNATAGGAEIAP 255
Query: 220 ESWKCDGF-------------VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+ + C+ D S EP + C N +++CIP +W+CD
Sbjct: 256 SVGRLQARCSCPYGERLAEDQMSCVPDPSAEPP--VQPCPNSWDFTCTNQRCIPKSWVCD 313
Query: 267 EEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ DC +DN+DE+ + C + + QC S +CIP N+ CD+E DC DN+
Sbjct: 314 GDDDC-----LDNSDEEQNCTKPTCGSNEFQCR-SGRCIPQNFRCDQENDCG-----DNS 362
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
DE V C ++ C ++ +C+ CD + DC + DEG FC K
Sbjct: 363 DE-----LDCGNVTCGTSQFAC-ANGRCIPNMWKCDSENDCGDSSDEGDFCAEKT 411
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TCI C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 2804 TCIANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 2858
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 2859 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCELPCPLSDFKCKSSGRCILDS 2906
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 2907 WRCDGDADCKDGSDEDPAVCFKRTCD 2932
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N + ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 2623 LQAYIAKMGMDGSNFTRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 2682
Query: 162 AVLCHPNELRCGSSNQCVALSKFCD 186
+ N + ALS F D
Sbjct: 2683 HTVLSGNRV-----PHVFALSLFDD 2702
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 9/125 (7%)
Query: 43 DW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP 99
DW + YF + + + + + + ++ N + L I LL D
Sbjct: 1424 DWVAGNMYFTNVYPHENYVEVSWLDGSNRKVLVKTTNDAPRELAVDPIKRLLYWID---- 1479
Query: 100 EIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+ R+ KA + G +PLVT I P L ID +YW DS L+T++ + G+
Sbjct: 1480 --YGQHPRIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYSGA 1537
Query: 160 HNAVL 164
+ V+
Sbjct: 1538 NRKVI 1542
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 15/146 (10%)
Query: 19 IPHNWLCDEEMDCSTDDIVDNTDEDW---DKYFKRILNGTHTLALEFN--HRNQSLCFIQ 73
+ N E + S ++ V+ DW + Y+ GT + N HR L ++
Sbjct: 15 VHRNGTGREIVLASQNEGVEGLAVDWASKNLYYIDSRKGTLNVLSTRNVTHRRTLLKNLK 74
Query: 74 QQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLV 133
+ V I + WD PA + +A G + WP+ L
Sbjct: 75 RPRAIVVHPNRGFI--FFSEWDRPA--------NITRANTDGTGLLVFKNVTLGWPNGLS 124
Query: 134 IDYNQDILYWCDSHLNTVESVRVDGS 159
ID+ +D +YWCD+ L+ V+ +DG+
Sbjct: 125 IDFKEDRVYWCDALLDHVQHANLDGT 150
>gi|109004875|ref|XP_001112880.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 2 [Macaca mulatta]
Length = 900
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 141/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCVTLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGRDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE CH NE +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCHGNEFQCGDGT-CVLAIKRCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
>gi|395732333|ref|XP_003776049.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Pongo abelii]
Length = 476
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/323 (30%), Positives = 149/323 (46%), Gaps = 31/323 (9%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
+RC S++ CV + CDG DC + DE ++ C+ QF+C KCI + W CDG D
Sbjct: 56 IRCNSTSLCVLPTWICDGSNDCGDYSDELKCPDSSCSWNQFACSAQKCISKHWICDGEDD 115
Query: 230 CLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
C DG DE ++ C C S C+P +WLCD E DC + +DE
Sbjct: 116 C-GDGLDESDSICGAVTCAADMFSCQGSHACVPRHWLCDGERDCP-----NGSDE----- 164
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL---CHPNE 344
CA + C + ++C ++ C V + D+D + C+ +
Sbjct: 165 ----LSTAGCAPNNTCDENAFMCHNKV-CIPKQFVCDHDDDCGDGSDESPQCEQSCNSSF 219
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCP 403
C + +C+ C+ K DC +G DE N+ + + CS C P C C
Sbjct: 220 FMC-KNGRCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCW 278
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVP 459
G ++ KT CVD DEC C Q C NT+ +Y C CT+GY ++PD C +++
Sbjct: 279 PGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS-- 335
Query: 460 QDEPASIIFSSTVDIRRIHLNGS 482
DE +I + +IR+I +GS
Sbjct: 336 -DEEPFLILADHHEIRKISTDGS 357
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 123/309 (39%), Gaps = 69/309 (22%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQC-----FNGQVQCA 253
+ C +F C G CIP S +C+ +DC D SDE N C H G ++C
Sbjct: 1 STCATVEFRCADGTCIPRSARCNQNIDC-ADASDEKNCNNTDCTHFYKLGVKTTGFIRCN 59
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ C+ W+CD DC D +DE C Q C+ ++KCI +W+CD E
Sbjct: 60 STSLCVLPTWICDGSNDCG-----DYSDELKCPDSSCSWNQFACS-AQKCISKHWICDGE 113
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D +D +D AV C + C S+ CV CDG+ DC NG DE
Sbjct: 114 DDCG--DGLDESDS------ICGAVTCAADMFSCQGSHACVPRHWLCDGERDCPNGSDEL 165
Query: 373 --------------GPFCNNKA-----------------DCENLKCSHKCSPTP---RGA 398
C+NK E+ +C C+ + +
Sbjct: 166 STAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCEQSCNSSFFMCKNG 225
Query: 399 MCFCPAGQNPNKTQCVDA--------DECLID--GSCDQTCTNTHLSYVCSCTEGYTLRP 448
C G NK C D +ECL C Q C + +SY C C G+ L+
Sbjct: 226 RCIPSGGLCNNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKD 285
Query: 449 DGKSCTAVN 457
DGK+C ++
Sbjct: 286 DGKTCVDID 294
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKC 217
AV C + C S+ CV CDG+ DC NG DE G N C F C C
Sbjct: 129 AVTCAADMFSCQGSHACVPRHWLCDGERDCPNGSDELSTAGCAPNNTCDENAFMCHNKVC 188
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
IP+ + CD DC + + P C C + C + +CIP LC+ + DC
Sbjct: 189 IPKQFVCDHDDDCGDGSDESPQ-CEQSCNSSFFMCK-NGRCIPSGGLCNNKDDCG----- 241
Query: 278 DNTDEDWDKFHQCFNGQV 295
D +DE ++C + +V
Sbjct: 242 DGSDERNCHINECLSKKV 259
>gi|327288793|ref|XP_003229109.1| PREDICTED: SCO-spondin-like [Anolis carolinensis]
Length = 5501
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 109/218 (50%), Gaps = 24/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C +CV + CD + DC +G DE FC C P QF C G+C+P + C
Sbjct: 1372 CAEGDFACHMGGRCVPSAWVCDNEDDCGDGSDE--FCVLSCAPHQFQCASGQCVPWGYHC 1429
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC+ DGSDE + C + +CA + +CIP LCD E+DC D++DE+
Sbjct: 1430 DGTPDCM-DGSDERGCPLPACAQEEFRCA-NGRCIPRKHLCDGELDCG---FADHSDEE- 1483
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C G+++CA + C+P+ CD DC D+ D D LC E
Sbjct: 1484 GCVPSCGPGELRCA-AGPCLPYLHRCDGHDDCG--DLSDERD-----------CLCPAGE 1529
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+C QC++ + C+G+ DC +GEDE FC + C
Sbjct: 1530 FQC-PEGQCLSKALVCNGEEDCPDGEDEA-FCPGQVTC 1565
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 23/209 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S QCV CDG PDC +G DE C +F C G+CIP C
Sbjct: 1410 CAPHQFQC-ASGQCVPWGYHCDGTPDCMDGSDERGCPLPACAQEEFRCANGRCIPRKHLC 1468
Query: 225 DGFVDC-LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DG +DC D SDE C+ C G+++CA + C+P+ CD DC D+ D D
Sbjct: 1469 DGELDCGFADHSDE-EGCVPSCGPGELRCA-AGPCLPYLHRCDGHDDCG--DLSDERD-- 1522
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C G+ QC +C+ +C+ E DC + D+ F V C P
Sbjct: 1523 ----CLCPAGEFQCP-EGQCLSKALVCNGEEDCPDGE---------DEAFCPGQVTCAPG 1568
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+L C CV+LS+ CDG DC +G DE
Sbjct: 1569 QLPC-PDRTCVSLSRACDGVHDCIDGADE 1596
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 103/240 (42%), Gaps = 48/240 (20%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPES 221
LC E +C QC++ + C+G+ DC +GEDE FC + C PGQ C C+ S
Sbjct: 1524 LCPAGEFQC-PEGQCLSKALVCNGEEDCPDGEDEA-FCPGQVTCAPGQLPCPDRTCVSLS 1581
Query: 222 WKCDGFVDCLEDGSDEP-----------------------------NTCIHQCFNGQVQC 252
CDG DC+ DG+DE T C + C
Sbjct: 1582 RACDGVHDCI-DGADEKLSQCLVIQTTPLVTTTTPGLLSTHPAPASRTLAPPCGRYEFLC 1640
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
S +C P W+CD E DC +D +DE + C Q C +CIP+ LCD
Sbjct: 1641 Q-SGECQPRGWVCDNEADC-----LDGSDELYCN-RTCGLDQFPCTFGDECIPYTHLCDG 1693
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C D +DE D S C P C ++ C+ +S+ CDG PDC+ GEDE
Sbjct: 1694 RPHCQ-----DQSDESIDTCGSTQIPPC-PGFFIC-NNRMCINVSRVCDGSPDCAQGEDE 1746
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 101/258 (39%), Gaps = 52/258 (20%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------------------- 197
V C P +L C CV+LS+ CDG DC +G DE
Sbjct: 1563 VTCAPGQLPC-PDRTCVSLSRACDGVHDCIDGADEKLSQCLVIQTTPLVTTTTPGLLSTH 1621
Query: 198 -GPFCNAECTP---GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
P P +F C G+C P W CD DCL DGSDE C C Q C
Sbjct: 1622 PAPASRTLAPPCGRYEFLCQSGECQPRGWVCDNEADCL-DGSDE-LYCNRTCGLDQFPCT 1679
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS------KKCIPHN 307
+CIP+ LCD C D +DE D C + Q+ + CI +
Sbjct: 1680 FGDECIPYTHLCDGRPHCQ-----DQSDESIDT---CGSTQIPPCPGFFICNNRMCINVS 1731
Query: 308 WLCDEEMDCST--DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+CD DC+ D++ + + A C E CG C+ + C+G D
Sbjct: 1732 RVCDGSPDCAQGEDELACESQRPPPGKRNQTAGPC--KEYSCG-DGACITFKQVCNGLAD 1788
Query: 366 CSNG-EDEGPFCNNKADC 382
C++G E G +++ DC
Sbjct: 1789 CADGTEASGWLPSDERDC 1806
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 65/168 (38%), Gaps = 43/168 (25%)
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------------------- 271
EP C G C + +C+P W+CD E DC
Sbjct: 1364 EPCPTPSPCAEGDFACHMGGRCVPSAWVCDNEDDCGDGSDEFCVLSCAPHQFQCASGQCV 1423
Query: 272 -------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
T D +D +DE C + +CA + +CIP LCD E+DC D+
Sbjct: 1424 PWGYHCDGTPDCMDGSDERGCPLPACAQEEFRCA-NGRCIPRKHLCDGELDCG---FADH 1479
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE+ C P ELRC ++ C+ CDG DC + DE
Sbjct: 1480 SDEE------GCVPSCGPGELRC-AAGPCLPYLHRCDGHDDCGDLSDE 1520
>gi|348550372|ref|XP_003461006.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Cavia porcellus]
Length = 848
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 143/329 (43%), Gaps = 31/329 (9%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C ++ CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 12 VCPAEKMSCGPTSHKCVPASWRCDGEKDCEGGADEAG-CATLCAPHEFQCGNRSCLASVF 70
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DGSDE C + C S CIP W+CD + DC +D D E
Sbjct: 71 -VCDGDDDCGDGSDERGCADLACGPREFHCGDSSGCIPDRWVCDRQFDC--EDGSDEVAE 127
Query: 283 DWDKFHQ-CFNGQVQCA-------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
+ Q + CA S +CI W CD + DC D +DE +
Sbjct: 128 HCGRAGQGTTSAPAACAPSTQFSCRSGECIYLGWRCDGDHDCK-----DKSDEADCPVLA 182
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCS 392
C +E +CG CV K C+ DC +G DE +C N CSH C+
Sbjct: 183 ----TCREDEFQCGDGT-CVLEIKRCNQARDCPDGSDEAGCLQGLNECLHNNGGCSHICT 237
Query: 393 PTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
G C CPAG NKT C D DEC C Q C N + C C GY +
Sbjct: 238 DLKMGFECSCPAGLRLLDNKT-CGDIDECEDPDVCSQICVNYKGYFKCECHPGYEMDTLT 296
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
K+C AV + S+IF++ +++RI L
Sbjct: 297 KNCKAV---AGKNPSLIFTNRHEVQRIDL 322
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + +S R RC L S DL P +D
Sbjct: 381 LHSPEGLAVDWVHKHIYWTDSGNKTISVATLDGRRRCT-----LFSRDLSEPRAIAVDPL 435
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS + + S
Sbjct: 436 RGFMYWSDWGYQAKIEKAGLNGMDRQTLVSYNIEWPNGIALDLLNQRLYWVDSKRHELAS 495
Query: 154 VRVDGSHNAVL 164
V G + +L
Sbjct: 496 VDFSGHNRRIL 506
>gi|56269932|gb|AAH87344.1| Unknown (protein for MGC:99095) [Xenopus laevis]
Length = 251
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 115/233 (49%), Gaps = 30/233 (12%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
H++ + +R C NE +CG +C+ CDG +C + DE P E T
Sbjct: 17 HVSAISGIRK--------CDRNEFQCGD-GKCIPYKWICDGSAECKDSSDESPETCREVT 67
Query: 207 PG--QFSCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
G QFSCG + +CIP SWKCDG DC E+GSDE N C H+ C + Q C S KCI
Sbjct: 68 CGTDQFSCGGRLNRCIPMSWKCDGQTDC-ENGSDE-NDCTHKVCADDQFTCR-SGKCISL 124
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+++CDE++DC D +DE + C QC CIP W CD + DC
Sbjct: 125 DFVCDEDLDCD-----DGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE---- 175
Query: 322 VDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE+ + C P E CG S +C+ +S CDG DC + DE
Sbjct: 176 -DGSDEEHCEGREPIKTDKPCSPLEFHCG-SGECIHMSWKCDGGFDCKDKSDE 226
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 90/192 (46%), Gaps = 22/192 (11%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALS-KKCIPH 261
+C +F CG GKCIP W CDG +C + + P TC C Q C +CIP
Sbjct: 26 KCDRNEFQCGDGKCIPYKWICDGSAECKDSSDESPETCREVTCGTDQFSCGGRLNRCIPM 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD + DC + +DE+ C + Q C S KCI +++CDE++DC
Sbjct: 86 SWKCDGQTDCE-----NGSDENDCTHKVCADDQFTCR-SGKCISLDFVCDEDLDCD---- 135
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DE + A C+P +C C+ CDG PDC +G DE C +
Sbjct: 136 -DGSDESY-----CPAPTCNPAMFQCKDKGICIPKLWACDGDPDCEDGSDE-EHCEGR-- 186
Query: 382 CENLKCSHKCSP 393
E +K CSP
Sbjct: 187 -EPIKTDKPCSP 197
>gi|332020358|gb|EGI60779.1| Vitellogenin receptor [Acromyrmex echinatior]
Length = 552
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 129/274 (47%), Gaps = 47/274 (17%)
Query: 224 CDGFVDCLEDGSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
C+G DC EDGSDE H C + +C+ + CIP CD DC
Sbjct: 2 CNGITDC-EDGSDEIFDICHNKLQHSLTCSKYEYKCSTNDTCIPKAMFCDTITDCP---- 56
Query: 277 VDNTDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI---VDNTDED 328
D +DE +D K C +C +CI W+CD DC +D++ ++N +
Sbjct: 57 -DGSDE-YDGCVKDLICTKNNFRCN-DGRCIFREWICDGRNDCPDGSDELNCSINNCKIE 113
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+Y N + C+ L C+GK DC + DE C + + +++KC
Sbjct: 114 NSQYLCENQL--------------CIPLKLVCNGKDDCGDKSDEID-CTSSSCPKSIKCD 158
Query: 389 HKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
H+C+ T +G +CFC G QN N+T C+D DEC G CDQ C N+ SY C C Y
Sbjct: 159 HECTLTSKGNICFCKPGYKLQNDNRT-CIDIDECQTYGICDQECVNSPGSYSCKCQTDYF 217
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
L+ D K+C A A I+FS+ +I ++L
Sbjct: 218 LQEDNKTCKASG-----RAKILFSTKTEIIGMYL 246
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKC 217
+++ C E +C +++ C+ + FCD DC +G DE C + CT F C G+C
Sbjct: 24 QHSLTCSKYEYKCSTNDTCIPKAMFCDTITDCPDGSDEYDGCVKDLICTKNNFRCNDGRC 83
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCF--NGQVQCALSKKCIPHNWLCDEEMDC 271
I W CDG DC DGSDE N I+ C N Q C ++ CIP +C+ + DC
Sbjct: 84 IFREWICDGRNDC-PDGSDELNCSINNCKIENSQYLCE-NQLCIPLKLVCNGKDDC 137
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ AGM G+N V++NI+ P SL IDY D LYW D L T+ES+R+DG+ + H
Sbjct: 373 IAVAGMDGKNIRVFVSENIKAPKSLTIDYQTDRLYWVDFKLRTIESIRLDGTDRRFVLH 431
>gi|402854614|ref|XP_003891959.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Papio anubis]
Length = 960
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 141/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCVTLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGRDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE CH NE +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCHGNEFQCGDGT-CVLAIKRCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
>gi|109004872|ref|XP_001112940.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 4 [Macaca mulatta]
Length = 959
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 141/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCVTLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGRDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE CH NE +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCHGNEFQCGDGT-CVLAIKRCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
>gi|373838786|ref|NP_001243322.1| low-density lipoprotein receptor-related protein 8 precursor [Danio
rerio]
gi|368511252|dbj|BAL43069.1| apolipoprotein E receptor 2 [Danio rerio]
Length = 984
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 149/371 (40%), Gaps = 76/371 (20%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDE------GPFCNAE------------- 204
C P + CG S+++CV+LS CDG+ DC NG DE C A+
Sbjct: 108 CPPEKFDCGGSTSKCVSLSWRCDGERDCENGADEEQCAADAKACPAKEFQCRNRMCVAPT 167
Query: 205 -------------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
C P +F C +CIP W CDG DC + +
Sbjct: 168 FVCDGDDDCGDRSDEEKCTAATASTCGPHEFRCNDSECIPTPWSCDGDPDCRDKSDESLE 227
Query: 240 TCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
C + C G+ +C S +CI NW CD + DC D +DE C
Sbjct: 228 RCSRRTEPQKPHCSMGEFRCR-SGECIHLNWKCDGDPDCK-----DKSDEANCPVLTCRP 281
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
Q QC CI C++ DC D +DE + P + C S +
Sbjct: 282 DQFQCG-DGSCIHGTKQCNKVHDCP-----DFSDEA--GCVNRTNKCEGPLKFMC-KSGE 332
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCN---NKADCENLKCSHKCSPTPRGAMCFCPAGQNP- 408
C+ SK CD DC + DE P N+ N CSH C G C CP+G
Sbjct: 333 CIDSSKVCDTIRDCKDWSDE-PVKECGLNECAINNGGCSHICKDRQIGFECQCPSGYKLL 391
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
+K C D DEC +C Q C N Y C C EGY + P K+C AV + ++F
Sbjct: 392 DKKTCGDIDECENPEACSQICINLKGDYKCECYEGYEMDPVTKTCKAVG----KSPYLMF 447
Query: 469 SSTVDIRRIHL 479
++ +IRRI L
Sbjct: 448 TNRHEIRRIDL 458
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 83/194 (42%), Gaps = 29/194 (14%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-CIHQ-CFNGQVQCALS-KKCIPH 261
C F+C G+C+P W+CDG +C DGSDE ++ C Q C + C S KC+
Sbjct: 67 CATTDFACKNGQCVPGRWRCDGEPEC-PDGSDEADSACSRQTCPPEKFDCGGSTSKCVSL 125
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP------HNWLCDEEMD 315
+W CD E DC + DE+ QCA K P N +C
Sbjct: 126 SWRCDGERDCE-----NGADEE------------QCAADAKACPAKEFQCRNRMCVAPTF 168
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-P 374
D D +K + A C P+E RC S +C+ CDG PDC + DE
Sbjct: 169 VCDGDDDCGDRSDEEKCTAATASTCGPHEFRCNDS-ECIPTPWSCDGDPDCRDKSDESLE 227
Query: 375 FCNNKADCENLKCS 388
C+ + + + CS
Sbjct: 228 RCSRRTEPQKPHCS 241
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ H+N + +S + + L+++ +L P +D R
Sbjct: 517 LHSPEGLAMDWVHKNIYWTDSGHKTISVANVDGKKRKVLIDT-ELGEPRAIAVDPRQGFM 575
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+EKAGM+G +R LV++ I+WP+ + +D + LYW DS L+ + SV ++
Sbjct: 576 YWSDWGAQAKIEKAGMNGVDRQVLVSERIEWPNGIALDLSSSRLYWVDSKLHLISSVDLN 635
Query: 158 GSHNAVL 164
G + +L
Sbjct: 636 GDNRRIL 642
>gi|3170549|gb|AAC34396.1| LRP1 [Takifugu rubripes]
Length = 1581
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 116/228 (50%), Gaps = 19/228 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 444 VCLPSQFKCSHPSRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPTQFQCAITKRCIPRVW 503
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 504 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DASDEPK 560
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ + C Q +C + +C+P W CD + DC DN+DED C
Sbjct: 561 EECAE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDED-----KCMPRQCS 608
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
+E C ++ +C+A CDG DC++G DE C+ K D ++ +C++
Sbjct: 609 ESEFAC-TNGRCIAGRWKCDGDHDCADGSDEHG-CDLKCDIDHFQCNN 654
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 192/468 (41%), Gaps = 70/468 (14%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTL--ALEF 62
C Q QCA++K+CIP W+CD + DC VD +DE N T EF
Sbjct: 485 CAPTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP--------ANCTQMTCGVDEF 531
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
++ C R +C +D ++ D P E + E +N
Sbjct: 532 RCKDSGRCI-------PARWKCDGEDDCGDASDEPKEEC--AERTCEPYQFRCKN----- 577
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALS 182
N P DY+ D C + + + + S + C ++ +C+A
Sbjct: 578 --NRCVPGRWQCDYDND----CGDNSDEDKCMPRQCSESEFAC--------TNGRCIAGR 623
Query: 183 KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
CDG DC++G DE C+ +C F C G CIP W+CD DCL DGSDE N
Sbjct: 624 WKCDGDHDCADGSDEHG-CDLKCDIDHFQCNNGHCIPIRWRCDADPDCL-DGSDEENCGT 681
Query: 243 HQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+ C + QC + C P W CD E DC D D E+ KF +C +
Sbjct: 682 ERHCPVDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPEECRKFQCPPTRAFRCQNDR 738
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
C+ + CD +C DN+DE + C +E C ++N+C++ + C+
Sbjct: 739 VCLQVSKRCDGVSNCG-----DNSDE-LNCQIPPAIPTCEKDEFLC-ANNRCISSTLRCN 791
Query: 362 GKPDCSNGEDEGPFC----------NNKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNK 410
DC + + C +N+ C + +H C + C C AG Q
Sbjct: 792 FFNDCEDFGSDEIGCKTDTKLTDCRSNRTQCGDGDEAH-CVTNGTDSFCSCKAGFQKIGH 850
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C D +ECL G C C NT SY CSC + +T D +C A N+
Sbjct: 851 RTCGDKNECLQFGVCSHICNNTKGSYKCSCHKYFTRISD--TCKADNI 896
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/441 (24%), Positives = 154/441 (34%), Gaps = 135/441 (30%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D R
Sbjct: 133 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALAVDVRYGYL 191
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ + GM G NRS +V + I WP+ L +D+
Sbjct: 192 YWSDWGDSPHIGRIGMDGTNRSVIVEEKITWPNGLTLDFINDRIYWADAREDYIEFASLD 251
Query: 137 --------NQDI------------LYWCDSHLNTVESV-RVDGSHNA------------- 162
N DI +YW D ++ + G++
Sbjct: 252 GTNRHTVLNHDIPHIFAMTLFEEYIYWTDWETKSINRAHKTQGTNKTTLISTLHRPMDVH 311
Query: 163 ---------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEGPFCNAECTPGQF 210
VL HP + G + LS K C + C + CT QF
Sbjct: 312 IYHPYRQPEVLNHPCQTNNGGCSNLCLLSPGGGYKCACPTNFYLASDHRTCMSNCTASQF 371
Query: 211 SCGMGKCIPESWKCDGFVDC---------------------------------------L 231
C KCIP WKCD DC
Sbjct: 372 VCKNDKCIPFWWKCDTEDDCGDRSDEPADCPEFKCRPGQFQCGTGICTNPAYICDGDNDC 431
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
+D SDE N IH C Q +C+ +CIP + C+ + +C D DE C
Sbjct: 432 QDNSDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCG-----DGEDEKDCPEVTCA 486
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q QCA++K+CIP W+CD + DC VD +DE + + C +E RC S
Sbjct: 487 PTQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSG 537
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ CDG+ DC + DE
Sbjct: 538 RCIPARWKCDGEDDCGDASDE 558
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SVR+DGS +
Sbjct: 1061 KIETAAMDGTLRQTLVHENIQWPTGLAVDYYNERLYWADAKLSVIGSVRLDGSDPVI 1117
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
CVD DEC C Q C NTH S+ C C +G+ L P+ + +IF++
Sbjct: 16 CVDIDECTTTYPCSQRCINTHGSFHCLCVDGFELSPNDPTICK------RRTYLIFANRY 69
Query: 473 DIRRIHLNGS 482
+R+++L+GS
Sbjct: 70 YLRKLNLDGS 79
>gi|156395766|ref|XP_001637281.1| predicted protein [Nematostella vectensis]
gi|156224392|gb|EDO45218.1| predicted protein [Nematostella vectensis]
Length = 1782
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 115/231 (49%), Gaps = 28/231 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C+P++ +C + +C++ CD DC + DE C C PGQF CG GKCIP SWKC
Sbjct: 989 CNPSQFKC-DNGRCISSKWRCDHDNDCGDMSDERN-CTGTCAPGQFKCGNGKCIPSSWKC 1046
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C Q +C + +CI W CD + DC D +DE
Sbjct: 1047 DHDNDC-GDNSDENNCPYSTCNPSQFKCD-NGRCISSKWRCDHDNDCG-----DMSDERN 1099
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPN 343
F C + +CA +++CIP W+CD + DC DN+DE D FS C N
Sbjct: 1100 CTFSTCASNYFRCA-NQRCIPMRWVCDFDNDCR-----DNSDERDCTPTFS----TCASN 1149
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNN-KADCENLKC 387
RC ++ +C+ + CD DC + DE G CN+ + C N +C
Sbjct: 1150 YFRC-ANQRCIPMRWVCDFDNDCRDNSDERDCTPTGRSCNSGQFSCSNGRC 1199
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 85/219 (38%), Gaps = 41/219 (18%)
Query: 177 QCVALSKFCDGKPDCSNGEDE-------GPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
+CV CDG DC + DE PF C +F C +C+ S +CDG D
Sbjct: 1251 RCVFYRLVCDGVDDCGDSSDEMSCNATATPFVPRSCHYWEFQCANRRCVYNSQRCDGQND 1310
Query: 230 CLEDGSDE--------PNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI 276
C D SDE P TC +CF S CI +WLC+ +DC + D+
Sbjct: 1311 C-GDWSDETGCSTPPIPTTCPADWVRCFYNS-----SGLCISTSWLCNGRVDCPDAWDEQ 1364
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
C + QC + CIP + CD + CS D +DE +
Sbjct: 1365 PAQCRTSPAPTRTCSPQEYQCD-NGACIPSRYECDGRIQCS-----DGSDE------TGC 1412
Query: 337 AVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P+ C + C+ K CDG DC + DE
Sbjct: 1413 TATISPSSCPGFLCDGNTLCLPFYKRCDGSYDCKDYTDE 1451
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 17/129 (13%)
Query: 165 CHPNELRC--GSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNAECTPGQFSCGMG 215
C + +RC SS C++ S C+G+ DC + DE P C+P ++ C G
Sbjct: 1329 CPADWVRCFYNSSGLCISTSWLCNGRVDCPDAWDEQPAQCRTSPAPTRTCSPQEYQCDNG 1388
Query: 216 KCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CIP ++CDG + C DGSDE I C + C+P CD DC
Sbjct: 1389 ACIPSRYECDGRIQC-SDGSDETGCTATISPSSCPGFLCDGNTLCLPFYKRCDGSYDCK- 1446
Query: 274 DDIVDNTDE 282
D TDE
Sbjct: 1447 ----DYTDE 1451
>gi|308502436|ref|XP_003113402.1| hypothetical protein CRE_26493 [Caenorhabditis remanei]
gi|308263361|gb|EFP07314.1| hypothetical protein CRE_26493 [Caenorhabditis remanei]
Length = 926
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 149/373 (39%), Gaps = 100/373 (26%)
Query: 163 VLCHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGK 216
V C N+ +C G + C+ + CDG+ DC+NG+DE +C F C G
Sbjct: 119 VSCQENQFQCEELSGDYSLCIPQTWVCDGQRDCTNGKDEMNCTTKATKCPENNFQCANGH 178
Query: 217 CIPESWKCDGFVDCLEDGSDE----PNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CI ++W CDG DC DGSDE P+ C ++QC G++ S +CIP W CD E+
Sbjct: 179 CIFKNWVCDGEEDC-SDGSDESQSAPSNCNQTVNQCPPGEMWKCGSGECIPSRWRCDSEV 237
Query: 270 DCSTDDIVDNTDED--WDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC D++DE H C + C S KCI ++CD E+DCS D +D
Sbjct: 238 DCK-----DHSDERNCTKIQHTCKLAEEFACKSSNKCINKAFVCDGELDCS-----DGSD 287
Query: 327 ED-------------------WDKYFSHNA-VLCHPNELRCGSSN--------------- 351
ED + Y + + V+C P RC
Sbjct: 288 EDECVGVNTECKKDEYTCPATYGAYGAESGHVICLPQSSRCNGEEECPDGGDEKNCNATT 347
Query: 352 -----------------QCVALSKFCD-GKPDCSNGEDE--GPFCNNKAD---------- 381
QC+ ++K C + DC +G GP + ++
Sbjct: 348 PATCKEGSEYTCPSTPLQCLEMTKLCSSARYDCGDGNMSVCGPTATSTSNFNPDQYIHFV 407
Query: 382 ------CENLKCSHKCSPT--PRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
C+ C P+ +C C G QCVD EC G CDQ C NT
Sbjct: 408 KLILEMCKTGSEGCVCRPSYITNSTVCHCKDGYKLENKQCVDIIECETPGVCDQICLNTP 467
Query: 434 LSYVCSCTEGYTL 446
SY C+C GY L
Sbjct: 468 GSYRCACHAGYQL 480
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 107/232 (46%), Gaps = 37/232 (15%)
Query: 164 LCHPNELRCGSSN---------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-- 212
+C E +CG +C+ + CDG+ DC + DE N C QF C
Sbjct: 71 VCGEKEHKCGDVTSVRSSLERFKCIPENWVCDGEFDCEDKSDEYQCKNVSCQENQFQCEE 130
Query: 213 ---GMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDE 267
CIP++W CDG DC +G DE N T +C QCA + CI NW+CD
Sbjct: 131 LSGDYSLCIPQTWVCDGQRDCT-NGKDEMNCTTKATKCPENNFQCA-NGHCIFKNWVCDG 188
Query: 268 EMDCSTDDIVDNTDEDWDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
E DCS D +DE +QC G++ S +CIP W CD E+DC
Sbjct: 189 EEDCS-----DGSDESQSAPSNCNQTVNQCPPGEMWKCGSGECIPSRWRCDSEVDCK--- 240
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D++DE H L E C SSN+C+ + CDG+ DCS+G DE
Sbjct: 241 --DHSDERNCTKIQHTCKL--AEEFACKSSNKCINKAFVCDGELDCSDGSDE 288
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 118/254 (46%), Gaps = 36/254 (14%)
Query: 210 FSCGMGKCIPESWKCDGFVDCL--EDGSDEPNTCI---HQCFN-GQVQCALSK-KCIPHN 262
F C G+CIP SW+CDG +DC ED + P C H+C + V+ +L + KCIP N
Sbjct: 39 FKCQDGRCIPMSWRCDGDIDCQNEEDEKNCPKVCGEKEHKCGDVTSVRSSLERFKCIPEN 98
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALS---KKCIPHNWLCDEEMDCST 318
W+CD E DC D +DE K C Q QC LS CIP W+CD + DC+
Sbjct: 99 WVCDGEFDCE-----DKSDEYQCKNVSCQENQFQCEELSGDYSLCIPQTWVCDGQRDCTN 153
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
N + A C N +C ++ C+ + CDG+ DCS+G DE
Sbjct: 154 GKDEMNC--------TTKATKCPENNFQC-ANGHCIFKNWVCDGEEDCSDGSDE------ 198
Query: 379 KADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
+ C+ + P G M C +G+ P++ +C +C D S ++ CT + +
Sbjct: 199 -SQSAPSNCNQTVNQCPPGEMWKCGSGECIPSRWRCDSEVDCK-DHSDERNCTK--IQHT 254
Query: 438 CSCTEGYTLRPDGK 451
C E + + K
Sbjct: 255 CKLAEEFACKSSNK 268
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 45 DKYFKRILNG--THT---LALEFNHRNQSLCF-----IQQQNVSSVRLRCAQINDLLNSW 94
DK + IL+G HT LA+++ H L F + Q NV ++ ++ L S
Sbjct: 574 DKKHEVILSGDKIHTPDGLAVDWVH---DLLFWTDGGLDQINVLDMKTGKQRV---LYSS 627
Query: 95 DLPAPEIFPLD--------------ERLEKAGMHGENRSPLVTKN-IQWPSSLVIDYNQD 139
DL P +D R+E++GM G++R +V + + WP+ L +DY
Sbjct: 628 DLEEPRAIAVDPEVGLIFWTDWGKKARIERSGMDGQHRVVIVEGDRVVWPNGLALDYVDK 687
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
+YW D+ + ++ S G + + H +E
Sbjct: 688 RVYWADAKIKSIFSCDYWGKNIKTVLHSHEY 718
>gi|61744467|ref|NP_059992.3| low-density lipoprotein receptor-related protein 8 isoform 3
precursor [Homo sapiens]
Length = 700
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 126/280 (45%), Gaps = 21/280 (7%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 DCEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG---- 156
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 157 -GADE---AGCATSLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNEC 211
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 212 LHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCE 271
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY + K+C A + S+IF++ ++RRI L
Sbjct: 272 CYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 308
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 435 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 492
>gi|308494432|ref|XP_003109405.1| CRE-RME-2 protein [Caenorhabditis remanei]
gi|308246818|gb|EFO90770.1| CRE-RME-2 protein [Caenorhabditis remanei]
Length = 924
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 156/381 (40%), Gaps = 82/381 (21%)
Query: 169 ELRCG-SSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
E CG S +C+ CD DC NG+DE G C C +C+ +KCDG
Sbjct: 33 EFDCGIGSLRCIPAEWQCDNIADCDNGKDELGCTYAHHCGNSFLLCKNTRCVAGEFKCDG 92
Query: 227 FVDCLEDGSDE--------------------PNTCIH----QCFNGQVQCALSKKCIPHN 262
DC DGSDE PNT + +CF +++C S +CI +
Sbjct: 93 EDDC-GDGSDEQHCEYNTRRSRSGRPAPPPLPNTFVGHNGPECFPPRLRCR-SGQCIQAD 150
Query: 263 WLCDEEMDCSTDD---------IVD----------------NTDEDWDKFHQCFNGQVQC 297
+CD DCS D IVD +D+DK +C +G C
Sbjct: 151 LICDGHADCSGGDDEVNCTRGPIVDLKKTPSLNEMHPDPTLFAHDDYDK-EECRHGYALC 209
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE--------DWDKYFSHNAVLCHP----NEL 345
CIP+N+ CD ++DC D +DE +++ S A H +
Sbjct: 210 FSGDVCIPNNFFCDGDIDCE-----DGSDELNCDINVPSEEQFLSGQADHMHACSAAGKF 264
Query: 346 RCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
C + C+ ++ C+G +C G+DE C ++C +C H C TP GA C
Sbjct: 265 ACETKGTEITVCIPMNATCNGIKECPLGDDESRQC---SECARKRCDHTCMNTPHGARCI 321
Query: 402 CPAGQ--NPNKTQCVDADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
C G + + C D DEC G C C + S+VC C GY L+ DG SC
Sbjct: 322 CQEGYKLSDDGVSCEDEDECATHGHICQHFCEDRLGSFVCKCANGYQLQEDGHSCKYEAT 381
Query: 459 PQDEPASIIFSSTVDIRRIHL 479
E + S +IR++ L
Sbjct: 382 STSE-GYLFISLGGEIRQMPL 401
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 130/329 (39%), Gaps = 85/329 (25%)
Query: 197 EGPFCNAECTPG-QFSCGMG--KCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQC 252
+ P N C P +F CG+G +CIP W+CD DC ++G DE T H C N + C
Sbjct: 20 QAPVTNTTCDPAKEFDCGIGSLRCIPAEWQCDNIADC-DNGKDELGCTYAHHCGNSFLLC 78
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH------------------------ 288
+ +C+ + CD E DC D +DE +++
Sbjct: 79 K-NTRCVAGEFKCDGEDDCG-----DGSDEQHCEYNTRRSRSGRPAPPPLPNTFVGHNGP 132
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD---------IVD-------NTDEDWDKY 332
+CF +++C S +CI + +CD DCS D IVD N
Sbjct: 133 ECFPPRLRCR-SGQCIQADLICDGHADCSGGDDEVNCTRGPIVDLKKTPSLNEMHPDPTL 191
Query: 333 FSHNAV---LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNNK 379
F+H+ C C S + C+ + FCDG DC +G DE F + +
Sbjct: 192 FAHDDYDKEECRHGYALCFSGDVCIPNNFFCDGDIDCEDGSDELNCDINVPSEEQFLSGQ 251
Query: 380 AD-------CENLKCSHKCSPT----PRGAMC----FCPAGQNPNKTQCVDADECLIDGS 424
AD C K + P A C CP G + ++ QC EC
Sbjct: 252 ADHMHACSAAGKFACETKGTEITVCIPMNATCNGIKECPLGDDESR-QC---SEC-ARKR 306
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
CD TC NT C C EGY L DG SC
Sbjct: 307 CDHTCMNTPHGARCICQEGYKLSDDGVSC 335
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 98/250 (39%), Gaps = 78/250 (31%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTP------ 207
HN C P LRC S QC+ CDG DCS G+DE GP + + TP
Sbjct: 128 GHNGPECFPPRLRC-RSGQCIQADLICDGHADCSGGDDEVNCTRGPIVDLKKTPSLNEMH 186
Query: 208 ------------------GQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIH----- 243
G C G CIP ++ CDG +DC EDGSDE N I+
Sbjct: 187 PDPTLFAHDDYDKEECRHGYALCFSGDVCIPNNFFCDGDIDC-EDGSDELNCDINVPSEE 245
Query: 244 QCFNGQV----QCALSKK------------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
Q +GQ C+ + K CIP N C+ +C D D+
Sbjct: 246 QFLSGQADHMHACSAAGKFACETKGTEITVCIPMNATCNGIKECPLGD---------DES 296
Query: 288 HQCFNGQVQCALSKKC------IPHNW--LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
QC +CA K+C PH +C E S D + + ED D+ +H +
Sbjct: 297 RQC----SECA-RKRCDHTCMNTPHGARCICQEGYKLSDDGV---SCEDEDECATHGHIC 348
Query: 340 CHPNELRCGS 349
H E R GS
Sbjct: 349 QHFCEDRLGS 358
>gi|402582420|gb|EJW76366.1| hypothetical protein WUBG_12725 [Wuchereria bancrofti]
Length = 397
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 112/227 (49%), Gaps = 35/227 (15%)
Query: 163 VLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGP------FCNAECTPGQFSCG-M 214
VLC N + +N +C+ CDG+ DC +G DE F EC P C
Sbjct: 180 VLCASNSSQFLCANGRCIPNEWKCDGENDCLDGSDEKGSDDKPCFVEKECPPNTIRCNNT 239
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQ-CALSK------KCIPHNWLCDE 267
KCIP+ + CDG DC D SDE + C NG++ CA K +CIP W CD
Sbjct: 240 KKCIPQQYACDGDNDC-GDYSDED---VKYCKNGEIPVCAARKFQCDNHRCIPEQWKCDS 295
Query: 268 EMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ DC D +DE + C + Q C + +CIP WLCD + DC DNT
Sbjct: 296 DNDCG-----DGSDEKLEMCSNTTCSSSQFTCG-NGRCIPVYWLCDGDNDC-----YDNT 344
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DED ++ S LC P++ RC + QC++L CDG+ DC +G DE
Sbjct: 345 DEDKERCPS---ALCRPDQFRCANKRQCISLKNHCDGQQDCDDGSDE 388
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 88/173 (50%), Gaps = 21/173 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAE---CTPGQFSCGMGKCIP 219
C PN +RC ++ +C+ CDG DC + DE +C N E C +F C +CIP
Sbjct: 229 CPPNTIRCNNTKKCIPQQYACDGDNDCGDYSDEDVKYCKNGEIPVCAARKFQCDNHRCIP 288
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
E WKCD DC DGSDE C + C + Q C + +CIP WLCD + DC
Sbjct: 289 EQWKCDSDNDC-GDGSDEKLEMCSNTTCSSSQFTCG-NGRCIPVYWLCDGDNDC-----Y 341
Query: 278 DNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DNTDED ++ C Q +CA ++CI CD + DC D +DED
Sbjct: 342 DNTDEDKERCPSALCRPDQFRCANKRQCISLKNHCDGQQDCD-----DGSDED 389
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 84/201 (41%), Gaps = 47/201 (23%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTL--ALE 61
+C ++C +KKCIP + CD + DC D +DED KY K NG + A +
Sbjct: 228 ECPPNTIRCNNTKKCIPQQYACDGDNDCG-----DYSDEDV-KYCK---NGEIPVCAARK 278
Query: 62 F---NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENR 118
F NHR C +Q +C ND + D E+LE +
Sbjct: 279 FQCDNHR----CIPEQ-------WKCDSDNDCGDGSD----------EKLEMCSNTTCSS 317
Query: 119 SPLVTKNIQWPSSLVIDYNQDILYW-CDSHLNTVESVRVDGSH-NAVLCHPNELRCGSSN 176
S N + +YW CD + ++ D + LC P++ RC +
Sbjct: 318 SQFTCGNGRCIP----------VYWLCDGDNDCYDNTDEDKERCPSALCRPDQFRCANKR 367
Query: 177 QCVALSKFCDGKPDCSNGEDE 197
QC++L CDG+ DC +G DE
Sbjct: 368 QCISLKNHCDGQQDCDDGSDE 388
>gi|324501645|gb|ADY40730.1| Very low-density lipoprotein receptor [Ascaris suum]
gi|324502291|gb|ADY41008.1| Very low-density lipoprotein receptor [Ascaris suum]
Length = 937
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 144/413 (34%), Gaps = 125/413 (30%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIPESWKCDGFVDCL 231
+C+ S CDG+ DC +G DE N C QF C K CIP SWKCDG DC+
Sbjct: 108 RCIPRSWVCDGEADCRDGSDERGCKNITCEKDQFMCNESKGHAAMCIPMSWKCDGQNDCV 167
Query: 232 EDGSDEP----------------NTCIHQCFNG--------------------------Q 249
+ +E N CI Q + +
Sbjct: 168 DKSDEEGCENDRTCGANEFKCANNVCIFQNWKCDGDDDCGDSSDESREECPKATCDPAEK 227
Query: 250 VQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKFHQCF------NGQVQCALSKK 302
QC CIP WLCD E DC D ++ TD Q + +C +
Sbjct: 228 FQCRSGGTCIPRTWLCDGEADCKDRSDEMNCTDAAIGMAKQPHPVTCHHEYEFRCRTGGQ 287
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CI W CD EMDC+ D +DE + C E C C+ SK+C+G
Sbjct: 288 CINKAWKCDGEMDCA-----DGSDEQ-----NCERRECTSEEKSC-DIGTCIHKSKWCNG 336
Query: 363 KPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP---------------------- 395
+ DC +G DE P K CE + H+C TP
Sbjct: 337 QEDCFDGSDEKDCHLAP--PKKEKCETYE--HRCDGTPLQCIPYESLCVPNMANNDCAKT 392
Query: 396 ------------------------RGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
+C+CP G CVD DEC G+C Q C N
Sbjct: 393 VCNKDLKICDEVAEGHCECRTTVHNATLCYCPRGFRLEGRVCVDIDECATVGTCAQKCIN 452
Query: 432 THLSYVCSCTEGYTL-----RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
T Y+C C GY L DG + + ++ S+ IRR L
Sbjct: 453 TPGGYICECYPGYRLTMGESSSDGPNTVGKCRARGSDPLLLLSNRAAIRRFDL 505
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 110/284 (38%), Gaps = 73/284 (25%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCG 213
R G+ +A ++ C S +C+ LS CDG DC G+DE C P +F C
Sbjct: 31 RTIGAAHAECLTDSQFTC-KSGKCIPLSWRCDGDEDCPGGDDEQNCKRVSCNPEREFECA 89
Query: 214 M----------------GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK- 256
+CIP SW CDG DC DGSDE C Q C SK
Sbjct: 90 SDSSGLPLYTSMIRYNPARCIPRSWVCDGEADC-RDGSDERGCKNITCEKDQFMCNESKG 148
Query: 257 ---KCIPHNWLCDEEMDCSTDDIVDNTDED------------------------W----- 284
CIP +W CD + DC VD +DE+ W
Sbjct: 149 HAAMCIPMSWKCDGQNDC-----VDKSDEEGCENDRTCGANEFKCANNVCIFQNWKCDGD 203
Query: 285 --------DKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDW 329
+ +C + QC CIP WLCD E DC D ++ TD
Sbjct: 204 DDCGDSSDESREECPKATCDPAEKFQCRSGGTCIPRTWLCDGEADCKDRSDEMNCTDAAI 263
Query: 330 DKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ V C H E RC + QC+ + CDG+ DC++G DE
Sbjct: 264 GMAKQPHPVTCHHEYEFRCRTGGQCINKAWKCDGEMDCADGSDE 307
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 7/110 (6%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
H E RC + QC+ + CDG+ DC++G DE ECT + SC +G CI +S C+
Sbjct: 276 HEYEFRCRTGGQCINKAWKCDGEMDCADGSDEQNCERRECTSEEKSCDIGTCIHKSKWCN 335
Query: 226 GFVDCLEDGSDEPNTCI-----HQCFNGQVQC-ALSKKCIPHNWLCDEEM 269
G DC DGSDE + + +C + +C +CIP+ LC M
Sbjct: 336 GQEDCF-DGSDEKDCHLAPPKKEKCETYEHRCDGTPLQCIPYESLCVPNM 384
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++ R+E+AGM G +R+ L++ + I+WP+ L +D + +YW D+ + + S G +
Sbjct: 638 VNARIERAGMDGNDRAVLISGDSIKWPNGLALDILEQRVYWADAKVKLIMSCDYWGENTR 697
Query: 163 VLCHPNE 169
++ +E
Sbjct: 698 LVIRSHE 704
>gi|395540761|ref|XP_003772319.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Sarcophilus harrisii]
Length = 995
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 141/350 (40%), Gaps = 87/350 (24%)
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
CD DC + DE C+ +FSC G+CI WKCDG DC DGSDE + C +
Sbjct: 6 CDYDNDCGDNSDEENCTPRPCSESEFSCANGRCIAGRWKCDGDHDC-ADGSDEKD-CTPR 63
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK--- 301
C Q QC S CIP W CD + DC +D +DE+ C G C L +
Sbjct: 64 CDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE-----ACSTGVRTCPLDEFQC 112
Query: 302 ---KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LRCGSSNQCVALS 357
C P W CD E DC DN+DE+ ++ C PN RC + C+ +
Sbjct: 113 NNTLCKPLAWKCDGEDDCG-----DNSDENPEECARFQ---CPPNRPFRCKNDRVCLWIG 164
Query: 358 KFCDGKPDCSNGEDE---------GPFCNNKA---------------------DCENLKC 387
+ CDG +C +G DE P C +K DCE+
Sbjct: 165 RQCDGTDNCGDGTDEEDCEPPTAQSPHCKDKKAQFLCRNGRCLSATLRCNMFDDCEDGSD 224
Query: 388 SHKCSP----------------------TPRGAMCFCPAGQN--PNKTQCVDADECLIDG 423
CSP +P+ C C G + P + C D +ECL G
Sbjct: 225 EEGCSPDPKLSSCAGNGSVCGDEARCIQSPKAVYCACRPGFHTVPGQRGCQDINECLNFG 284
Query: 424 SCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVPQDEPASIIF 468
+C Q C NT S++CSC + T + +G + + D +F
Sbjct: 285 TCSQLCNNTKGSHLCSCARNFMKVHNTCKAEGSEYQVLYIADDNEIRSLF 334
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+
Sbjct: 477 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSIIGSIRLNGT 529
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 50/109 (45%), Gaps = 17/109 (15%)
Query: 165 CHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCGM 214
C PN RC + C+ + + CDG +C +G DE P C + QF C
Sbjct: 146 CPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAQSPHCKDK--KAQFLCRN 203
Query: 215 GKCIPESWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCI 259
G+C+ + +C+ F DC EDGSDE P+ + C C +CI
Sbjct: 204 GRCLSATLRCNMFDDC-EDGSDEEGCSPDPKLSSCAGNGSVCGDEARCI 251
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD + DC DN+DE+ C + CA + +CI W CD + DC+
Sbjct: 1 PGRWQCDYDNDCG-----DNSDEENCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-- 52
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE C ++ +C S C+ L CD DC +G DE
Sbjct: 53 ---DGSDE------KDCTPRCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 95
>gi|1483143|dbj|BAA09328.1| apolipoprotein E receptor 2 precursor [Homo sapiens]
gi|2344802|dbj|BAA21824.1| ApoER2 [Homo sapiens]
Length = 963
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATVSQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAAG---GKSPSLIFTNRYEVRRIDL 437
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 93
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 94 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|326934977|ref|XP_003213558.1| PREDICTED: very low-density lipoprotein receptor-like, partial
[Meleagris gallopavo]
Length = 246
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 122/231 (52%), Gaps = 24/231 (10%)
Query: 157 DGS-HNAVLCH-----PNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +A LCH NE+ CG S QC+ +S CDG+ DC +GEDE N C+ +
Sbjct: 31 DGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSAAE 90
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C G+CI +S+ C+G DC DGSDE C + QC S CIP +W+CD++
Sbjct: 91 FTCSSGQCISKSFVCNGQDDC-SDGSDELECAPPTCGVHEFQCK-SSTCIPISWVCDDDA 148
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DCS +D+ ++ +C +VQC S +CI W CD + DC D +DE
Sbjct: 149 DCSDHSDESLEQCGRQPAPPVKCSTSEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE 202
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
+ + C P++ RC N C+ S+ C+G DC +G DE CNN
Sbjct: 203 -----INCPSRTCRPDQFRCEDGN-CIHGSRQCNGVRDCLDGTDEA-NCNN 246
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 107/204 (52%), Gaps = 20/204 (9%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCG--MGKCIPESWKCDGFVDC 230
S QCV CDG PDC +G DE C+ C + SCG +CIP SWKCDG DC
Sbjct: 13 SGQCVPNRWQCDGDPDCEDGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDC 72
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+ G DE N C + C+ S +CI +++C+ + DCS D +DE C
Sbjct: 73 -DSGEDEENCGNVTCSAAEFTCS-SGQCISKSFVCNGQDDCS-----DGSDELECAPPTC 125
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCG 348
+ QC S CIP +W+CD++ DCS D++DE ++ A V C +E++CG
Sbjct: 126 GVHEFQCK-SSTCIPISWVCDDDADCS-----DHSDESLEQCGRQPAPPVKCSTSEVQCG 179
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
S +C+ CDG PDC +G DE
Sbjct: 180 -SGECIHKKWRCDGDPDCKDGSDE 202
>gi|47210424|emb|CAF92449.1| unnamed protein product [Tetraodon nigroviridis]
Length = 349
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/286 (34%), Positives = 125/286 (43%), Gaps = 61/286 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C N+ C S+ CV CD DCS+G DE P C Q C G C +
Sbjct: 68 CTSNQFSC-SNGACVPGEYQCDHTEDCSDGSDERSCHYPVC------AQLRCASGACYNQ 120
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ +CD VDC DGSDE N C C G QC + C+P +++CD + DC D +
Sbjct: 121 TQRCDHIVDC-RDGSDEAN-CTQHCSAGLFQCH-NGMCVPRSYICDHDDDCG-----DRS 172
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C C S +CI WLCD E DC DN DE K + C
Sbjct: 173 DELNCTYPTCKGNYFTCP-SGRCIHQVWLCDGEEDCE-----DNADE---KGCDNVPKEC 223
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMC 400
+P E C SS C+ + + CDG+ C +GEDE N
Sbjct: 224 YPGEWPCPSSGLCIPVHQLCDGRAHCPDGEDE----TNTT-------------------- 259
Query: 401 FCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
AG+N N D+C + G CDQ C + S+ CSC EGYTL
Sbjct: 260 ---AGRNCN------FDDCSMWGVCDQLCEDRTGSHRCSCREGYTL 296
>gi|402586341|gb|EJW80279.1| hypothetical protein WUBG_08812, partial [Wuchereria bancrofti]
Length = 524
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 98/200 (49%), Gaps = 22/200 (11%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKC 303
CF Q +CA +CI +W+CD DC+ D++DE +F QC + QC +K+C
Sbjct: 10 CFQYQFRCADQSQCIQKSWVCDGSSDCA-----DSSDEPSTCEFKQCSGSEFQCK-NKRC 63
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
P + CD DC DN+DE+ LC P + C S C+ +K CDGK
Sbjct: 64 QPRKFRCDYYDDCG-----DNSDEE-----GCGQYLCPPQQWNCPGSGHCIHKTKLCDGK 113
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK---TQCVDADECL 420
DC +G DE +N C +L C C +P G +C CP G ++ C D +EC+
Sbjct: 114 NDCLDGSDEKNCSSNL--CPSLGCQAGCHSSPSGGVCTCPVGYKLDERFHRTCSDINECI 171
Query: 421 IDGSCDQTCTNTHLSYVCSC 440
G CDQ C N + CSC
Sbjct: 172 EWGYCDQGCQNHRPGFTCSC 191
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCI 218
HN C + RC +QC+ S CDG DC++ DE C +C+ +F C +C
Sbjct: 5 HNHTACFQYQFRCADQSQCIQKSWVCDGSSDCADSSDEPSTCEFKQCSGSEFQCKNKRCQ 64
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
P ++CD + DC D SDE + C Q C S CI LCD + DC +D
Sbjct: 65 PRKFRCDYYDDC-GDNSDEEGCGQYLCPPQQWNCPGSGHCIHKTKLCDGKNDC-----LD 118
Query: 279 NTDE 282
+DE
Sbjct: 119 GSDE 122
>gi|301627695|ref|XP_002943005.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Xenopus (Silurana) tropicalis]
Length = 949
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 136/337 (40%), Gaps = 72/337 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S+ C++ +CDG+ DC++G DE C C+ QF C G+CI WKC
Sbjct: 155 CALKEFLC-SNGDCISSRFWCDGEYDCADGSDERN-CETGCSKEQFQCSTGQCISAKWKC 212
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DG DC + G DE N C + + C S C+ C+ E DC+ D +DE
Sbjct: 213 DGHEDC-KSGEDEKNCEPVSPTCSSSEYVCD-SGGCVSAYLRCNGEYDCA-----DGSDE 265
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ D +C Q +C CIP W CD DC VD +DED LC P
Sbjct: 266 N-DCVAECKENQFRCRNRAYCIPLRWFCDGVQDC-----VDGSDED---NCERVKFLCPP 316
Query: 343 NE-LRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNNKADCENLKC----- 387
RC ++ C+ + C+G +C + DE P ++ C N KC
Sbjct: 317 TRPFRCHNNRVCLRTEQICNGLDECGDNSDEACCAARQKVKPCKKDEFTCNNKKCISVDL 376
Query: 388 -----------------------------------SHKCSPTPRGAMCFCPAG--QNPNK 410
C+ T A+C C AG +N
Sbjct: 377 QCDKFDDCGDESDEQGCKMEMGEFSCEDDVNPCGDDAYCNQTNTPAVCHCKAGFQRNLKN 436
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
QC D +ECL+ GSC CTN SY C C + R
Sbjct: 437 RQCEDINECLLLGSCSHHCTNLKGSYRCLCDRNFLER 473
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 102/204 (50%), Gaps = 19/204 (9%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFV 228
RC ++++C+ CD DC +G DE C +C PG+F CG G C ++ CDG
Sbjct: 1 FRC-NTDKCIPFWWKCDTVDDCGDGSDEPAECPEFKCQPGRFQCGSGLCALPAFICDGEN 59
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
DC D SDE N + C +GQ +C +KCIP N C+ + DC D DE +
Sbjct: 60 DC-GDNSDELNCDTYVCLSGQFKCTKKQKCIPINLRCNGQNDCG-----DEEDEIDCPEN 113
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C QC +K CI W+CDE+ DC+ D +DE + C E C
Sbjct: 114 SCSPDHFQCKTTKHCISKLWVCDEDSDCA-----DGSDE-----ANCEPQTCALKEFLC- 162
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
S+ C++ +CDG+ DC++G DE
Sbjct: 163 SNGDCISSRFWCDGEYDCADGSDE 186
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 88/182 (48%), Gaps = 25/182 (13%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEE 268
F C KCIP WKCD DC DGSDEP C +C G+ QC S C ++CD E
Sbjct: 1 FRCNTDKCIPFWWKCDTVDDC-GDGSDEPAECPEFKCQPGRFQCG-SGLCALPAFICDGE 58
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE + C +GQ +C +KCIP N C+ + DC ++ + E+
Sbjct: 59 NDCG-----DNSDELNCDTYVCLSGQFKCTKKQKCIPINLRCNGQNDCGDEEDEIDCPEN 113
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
C P+ +C ++ C++ CD DC++G DE A+CE C+
Sbjct: 114 ----------SCSPDHFQCKTTKHCISKLWVCDEDSDCADGSDE-------ANCEPQTCA 156
Query: 389 HK 390
K
Sbjct: 157 LK 158
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 101/243 (41%), Gaps = 40/243 (16%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIP 219
+ +C + +C +C+ ++ C+G+ DC + EDE C+P F C K CI
Sbjct: 71 DTYVCLSGQFKCTKKQKCIPINLRCNGQNDCGDEEDEIDCPENSCSPDHFQCKTTKHCIS 130
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ W CD DC DGSDE N C + C+ + CI + CD E DC+ D
Sbjct: 131 KLWVCDEDSDC-ADGSDEANCEPQTCALKEFLCS-NGDCISSRFWCDGEYDCA-----DG 183
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD----------------CSTDDIVD 323
+DE + C Q QC+ + +CI W CD D CS+ + V
Sbjct: 184 SDER-NCETGCSKEQFQCS-TGQCISAKWKCDGHEDCKSGEDEKNCEPVSPTCSSSEYVC 241
Query: 324 NTDEDWDKYFSHNA--------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
++ Y N C N+ RC + C+ L FCDG DC +G
Sbjct: 242 DSGGCVSAYLRCNGEYDCADGSDENDCVAECKENQFRCRNRAYCIPLRWFCDGVQDCVDG 301
Query: 370 EDE 372
DE
Sbjct: 302 SDE 304
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 147/392 (37%), Gaps = 84/392 (21%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--P 199
+WCD + + D + C + +C S+ QC++ CDG DC +GEDE
Sbjct: 172 FWCDGEYDCADGS--DERNCETGCSKEQFQC-STGQCISAKWKCDGHEDCKSGEDEKNCE 228
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G C+ +C+G DC DGSDE N C+ +C Q +C CI
Sbjct: 229 PVSPTCSSSEYVCDSGGCVSAYLRCNGEYDC-ADGSDE-NDCVAECKENQFRCRNRAYCI 286
Query: 260 PHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
P W CD DC VD +DED KF +C ++ C+ +C+
Sbjct: 287 PLRWFCDGVQDC-----VDGSDEDNCERVKFLCPPTRPFRCHNNRVCLRTEQICN----- 336
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---- 372
D+ DN+DE C +E C ++ +C+++ CD DC + DE
Sbjct: 337 GLDECGDNSDEACCAA-RQKVKPCKKDEFTC-NNKKCISVDLQCDKFDDCGDESDEQGCK 394
Query: 373 ---GPF--------CNNKADC----------------ENLK---------------CSHK 390
G F C + A C NLK CSH
Sbjct: 395 MEMGEFSCEDDVNPCGDDAYCNQTNTPAVCHCKAGFQRNLKNRQCEDINECLLLGSCSHH 454
Query: 391 CSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
C+ C C C+ D T + YV + TE +
Sbjct: 455 CTNLKGSYRCLCDRNFLERNHSCIAQD------------TEDQVLYVANDTEVLSFTYPF 502
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ N + + I ++S + ++L G+
Sbjct: 503 RH----NAKHQQISRIAYNSRITGMDMYLQGN 530
>gi|344278684|ref|XP_003411123.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
isoform 2 [Loxodonta africana]
Length = 788
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/242 (34%), Positives = 120/242 (49%), Gaps = 22/242 (9%)
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+ +C Q +C +++CIP W CDE+ DCS DN+DED C + C +
Sbjct: 39 VKECEENQFRCR-NERCIPSVWRCDEDDDCS-----DNSDEDDCPKKTCADSDFTCD-NG 91
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFC 360
CIP W CD E +C D +DE + N +C +L CG +S++CV S C
Sbjct: 92 HCIPERWKCDGEEECP-----DGSDE---TEATCNKQVCPAEKLSCGPTSHKCVPASWRC 143
Query: 361 DGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
DG+ DC +G DE + +C N CSH C+ G C CPAG + ++ C D D
Sbjct: 144 DGEKDCESGADEAGCASWLNECLHNNGGCSHICTDLKIGFECTCPAGFRLLDQKTCGDID 203
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC +C Q C N + C C GY + K+C AV + S+IF++ ++RRI
Sbjct: 204 ECEDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRI 260
Query: 478 HL 479
L
Sbjct: 261 DL 262
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 58/112 (51%), Gaps = 5/112 (4%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ RC + +C+ CD DCS+ DE C F+C G CIPE WKC
Sbjct: 42 CEENQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCDNGHCIPERWKC 100
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST 273
DG +C DGSDE TC Q C ++ C S KC+P +W CD E DC +
Sbjct: 101 DGEEEC-PDGSDETEATCNKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCES 151
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + ++ L S DL P +D
Sbjct: 321 LHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGSRRRTLF-SQDLSEPRAISVDPLRGFM 379
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 380 YWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFN 439
Query: 158 GSHNAVL 164
G + +L
Sbjct: 440 GGNRKML 446
>gi|392340666|ref|XP_001066578.3| PREDICTED: low-density lipoprotein receptor-related protein 8
[Rattus norvegicus]
Length = 1007
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 145/370 (39%), Gaps = 75/370 (20%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC----------- 212
C +L CG +S++CV S CDG+ DC G DE C C P +F C
Sbjct: 124 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCPTLCAPHEFQCSNRSCLASVFV 182
Query: 213 -----------------------------GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
G G CIPE W CDG DC ED SDE
Sbjct: 183 CDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERWVCDGQFDC-EDRSDEAAELCG 241
Query: 244 QCFNGQ----VQCA-------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
+ G CA S +CI W CD + DC D +DE C
Sbjct: 242 RAGQGTTATPAACAPTTQFTCRSGECIHLGWRCDGDRDCK-----DKSDEADCSPGPCRE 296
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
QC CI C++E DC +D +DE + P +C S +
Sbjct: 297 NDFQCG-DGTCILAIKRCNQERDC-----LDGSDE---AGCLQESTCEGPRRFQC-KSGE 346
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPN 409
CV K CD + DC + DE +C N CSH C+ G C CPAG Q +
Sbjct: 347 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLD 406
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
+ C D DEC +C Q C N + C C GY + K+C AV S+IF+
Sbjct: 407 QKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV---AGRSPSLIFT 463
Query: 470 STVDIRRIHL 479
+ ++RRI L
Sbjct: 464 NRHEVRRIDL 473
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 94/236 (39%), Gaps = 28/236 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE CT F+C G CIPE WKC
Sbjct: 44 CEEDQFRC-RNERCIPSVWRCDEDNDCSDNSDEDDCPKRTCTDSDFTCDNGHCIPERWKC 102
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC
Sbjct: 103 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCE--------- 152
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA---V 338
G + C PH + C C V + D+D
Sbjct: 153 ----------GGADEAGCPTLCAPHEFQCSNR-SCLASVFVCDGDDDCGDGSDERGCSDP 201
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C P E RCG C+ CDG+ DC + DE +A C+PT
Sbjct: 202 ACPPREFRCGGGGTCIPERWVCDGQFDCEDRSDEAAELCGRAGQGTTATPAACAPT 257
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + VS R RC N DL P +D
Sbjct: 532 LHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNR-----DLSEPRAIAVDPL 586
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 587 RGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSS 646
Query: 154 VRVDGSHNAVL 164
+ +G + +L
Sbjct: 647 IDFNGGNRKML 657
>gi|47222148|emb|CAG11574.1| unnamed protein product [Tetraodon nigroviridis]
Length = 893
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 151/378 (39%), Gaps = 114/378 (30%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCG--MGKCIPESWKCDGFVDCL 231
QCV CDG+P+C++G DE C+ + C P +F CG KC+ SW+CDG DC
Sbjct: 72 GQCVPARWRCDGEPECADGSDEADATCSRQTCPPEKFDCGGSASKCVSLSWRCDGERDC- 130
Query: 232 EDGSDEPNTCI---------HQCFNGQVQCAL---------------------------- 254
E+G+DE QC NG+ +
Sbjct: 131 ENGADEEQCAADGKACPANDFQCRNGKCVAPIFVCDGDDDCGDGSDEEKCSAPTCGQHEF 190
Query: 255 ---SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--------KFHQCFNGQVQCALSKKC 303
+CIP W CD + DC D +DE + K +C G+ QC S +C
Sbjct: 191 RCNDSECIPTLWSCDGDPDCK-----DKSDESMERCSRRTEPKKPRCPVGEFQCG-SGEC 244
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN------------ 351
+ NW CD + DC D +DE + + C P+E +CG +
Sbjct: 245 VHMNWKCDGDADCK-----DKSDET-----NCPLLTCRPDEFQCGDGSCIHGTKQCNKVH 294
Query: 352 ---------QCVALSKFCDG--KPDCSNGE--DEGPFCNNKADCENLK------------ 386
CV ++K CDG K C NGE D C++ DC++L
Sbjct: 295 DCPDYSDEAGCVNVTK-CDGPKKFRCKNGECIDSSKVCDSVKDCKDLSDEPIKECGVNEC 353
Query: 387 ------CSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
CSH C G C CP+G +K C D DEC +C Q C N Y C
Sbjct: 354 EDNNGGCSHICRDRRIGYDCDCPSGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCE 413
Query: 440 CTEGYTLRPDGKSCTAVN 457
C EGY + P K+C AV
Sbjct: 414 CYEGYEMDPVTKTCKAVG 431
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 81/206 (39%), Gaps = 42/206 (20%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCALS-KKCIPH 261
C F+C G+C+P W+CDG +C DGSDE + TC Q C + C S KC+
Sbjct: 62 CATTDFTCKNGQCVPARWRCDGEPEC-ADGSDEADATCSRQTCPPEKFDCGGSASKCVSL 120
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKF----HQCFNGQVQCAL------------------ 299
+W CD E DC + D QC NG+ +
Sbjct: 121 SWRCDGERDCENGADEEQCAADGKACPANDFQCRNGKCVAPIFVCDGDDDCGDGSDEEKC 180
Query: 300 -------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+CIP W CD + DC D D + E + C E +
Sbjct: 181 SAPTCGQHEFRCNDSECIPTLWSCDGDPDCK--DKSDESMERCSRRTEPKKPRCPVGEFQ 238
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
CG S +CV ++ CDG DC + DE
Sbjct: 239 CG-SGECVHMNWKCDGDADCKDKSDE 263
>gi|115640592|ref|XP_001199072.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Strongylocentrotus purpuratus]
Length = 921
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 109/319 (34%), Positives = 142/319 (44%), Gaps = 52/319 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSCGMGKCIPESWK 223
C +E RC SN+C+ CD + DC GEDE C P QF C G CI + +
Sbjct: 45 CSESEFRC-LSNKCIPSRFVCDFEEDCPGGEDEVACPERMCYFPTQFQCDSGHCIDDQFV 103
Query: 224 CDGFVDCLEDGSDEPN--TCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
CDG C +D SDE N T + Q C+ Q C C+P +W CD TDD D
Sbjct: 104 CDGTSQC-QDSSDEVNCPTRLPQGLYCYPNQFTCD-DTVCLPLDWRCD-----GTDDCPD 156
Query: 279 NTDE----------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DE D ++ +C NG CIP + LCD D D +DE+
Sbjct: 157 GSDETLSLCSSIPCDPEERWRCDNG--------FCIPRSGLCD-----GVDTCGDASDEN 203
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLK 386
+ C P E +C + N C+ CD + DC + DE C + C N
Sbjct: 204 -NHDLCEEVRQCTPEEFKCINKN-CIPQEYVCDLEDDCGDQSDEYG-CYDSGSCAENNGG 260
Query: 387 CSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
C +C+ G C C G ++T C D DECL D C Q C+NT SY C+C+EGY
Sbjct: 261 CQEQCNELDMGYYCSCADGHQLAEDRTGCEDIDECL-DNPCQQQCSNTKGSYECTCSEGY 319
Query: 445 T-----LRPDGKSCTAVNV 458
LR G+ C AV
Sbjct: 320 VDDGVILR--GQDCKAVGA 336
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E M+G+ R LV +I P+ L ID+ N+D +YWCD N +ES+ DGS+ VL
Sbjct: 501 KIEMVWMNGDGRQVLVDTSIVMPTGLAIDFANRDTVYWCDQSRNAIESMNWDGSNRKVL 559
>gi|1817731|gb|AAB42184.1| low-density lipoprotein receptor [Chiloscyllium plagiosum]
Length = 857
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 146/334 (43%), Gaps = 35/334 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPE 220
A LC +E +C N C++L CD DC++G DE C P F C K CIP+
Sbjct: 106 ARLCKDHEFQCNDGN-CISLKFVCDDDRDCADGSDENACPERTCGPHLFQCAKSKLCIPQ 164
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
W CD DC ++ + C C + + C S +CI W CD +DC
Sbjct: 165 LWACDDDPDCPDESDEWSQNCGRSSTFAPPNPCSSLEFHCG-SGECIHMKWRCDGGVDCR 223
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE C + QC+ CI ++ C+ E +C D +DE
Sbjct: 224 -----DQSDEAGCAVATCRPDEFQCS-DGTCIHGSFQCNREFNCH-----DQSDE----I 268
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
N C P++ +C +S +C+ + K CD DC + DE + +C EN CSH
Sbjct: 269 GCVNVTKCESPHKFKC-TSGECIMMDKVCDSHRDCRDWSDEPLKECGENECLNENGGCSH 327
Query: 390 KCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C G C C P + + +C D DEC +C Q C N + C C EGY + P
Sbjct: 328 ICKDLKIGYKCLCRPGFRLIDNAKCEDIDECENPDTCSQNCINLEGGFKCECKEGYQMDP 387
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C A+ + F++ ++R++ L+ S
Sbjct: 388 MTRQCKAIGT----VGYLFFTNRDEVRKLTLDRS 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 111/229 (48%), Gaps = 28/229 (12%)
Query: 158 GSHNAVL----CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFS 211
G A+L C NE +CG +C+ CDG+ +C +G DE N C+ +FS
Sbjct: 16 GHATAILGLRKCERNEFQCGDG-KCIPYKWLCDGQSECDDGSDESLETCRNKTCSALEFS 74
Query: 212 CG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CG + KCIP SW CD DC E+GSDE N C + + QC CI ++CD++
Sbjct: 75 CGGRVNKCIPTSWHCDSQKDC-ENGSDEENCPARLCKDHEFQCN-DGNCISLKFVCDDDR 132
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DC+ D +DE+ C QCA SK CIP W CD++ DC + ++W
Sbjct: 133 DCA-----DGSDENACPERTCGPHLFQCAKSKLCIPQLWACDDDPDCPDE------SDEW 181
Query: 330 DKYFSHNAVLCHPN-----ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ ++ PN E CGS +C+ + CDG DC + DE
Sbjct: 182 SQNCGRSSTFAPPNPCSSLEFHCGSG-ECIHMKWRCDGGVDCRDQSDEA 229
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 11/130 (8%)
Query: 38 DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW 94
D DW + Y+ L T ++A + + L Q ++ + + W
Sbjct: 477 DGLAVDWIHQNIYWTDFLTSTISVANTAGTKRKVLIKEQLSKPRAIAVDPVHGFLYWSDW 536
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
PA ++EK G++G +R PLVT+NI+WP+ + +D LYW DS L+T+ S+
Sbjct: 537 GSPA--------KIEKGGLNGVDRYPLVTENIEWPNGITLDLVNQRLYWVDSKLHTLSSI 588
Query: 155 RVDGSHNAVL 164
V G + L
Sbjct: 589 GVAGDNRKTL 598
>gi|341892113|gb|EGT48048.1| hypothetical protein CAEBREN_28836, partial [Caenorhabditis
brenneri]
Length = 839
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 146/350 (41%), Gaps = 45/350 (12%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGP- 199
+ CD + ++ + + E RC + N C+ L CDG PDC + DE
Sbjct: 37 FVCDGKMQCLDGLDEEHCEEEDCIKGREFRCKNGNSACMDLIFRCDGVPDCEDESDESEE 96
Query: 200 FCNAECTP-----GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCA 253
FC + QF C GKC+ CDGF DCL G DE + C C+
Sbjct: 97 FCKGNSSSTCAKMNQFMCADGKCLRSFQLCDGFPDCLT-GEDEKDCPASMCNSTTHFSCS 155
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC-ALSKKCIPHNWLCDE 312
KC+ CD DD DN+DE C + C + S K H
Sbjct: 156 SGNKCVSKQLECD-----GVDDCGDNSDE-----AHCKTVRTNCFSDSNKQTIH--FQAS 203
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ C +DD T S + CH N+++C ++ CDGK DC G+DE
Sbjct: 204 ELRCLSDDSDGTTP-------SSSLFKCHGNKVKC------ISDKLLCDGKKDCDEGDDE 250
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCT 430
G +C+ K D +L CSH C TP G +C CP K C C G C Q C
Sbjct: 251 GLWCSIKCDPSDLGCSHTCRNTPFGPICSCPDDHYLAKDHATCTKKSPCRF-GQCSQHCI 309
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPAS--IIFSSTVDIRRIH 478
++ C C +G+ L D SC + D+P +I+S+ +IR I
Sbjct: 310 PHGSTHFCYCEDGFKLSSDKFSCYS-----DDPQKPFLIYSNRHEIRMIQ 354
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMG 215
G N C NE +C S++C+ CD DC +DE +C+ C PG F+CG G
Sbjct: 740 GERNEKKCAENEFKCLHSDRCIRYEDTCDQFNDCPMFDDEDAKYCSTRVCRPGYFTCGNG 799
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN 239
CIPES C+ DC + +DE N
Sbjct: 800 LCIPESKVCNRVNDC-TNFADEAN 822
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 102/283 (36%), Gaps = 54/283 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+E+ G R+ +V +++ L ID + + LY+ DS + DG++ ++
Sbjct: 576 IEQVYFSGFKRTQIVQEDLHDLRGLTIDLDSEKLYFSDSKDFKLSRCDFDGTNRELVVSN 635
Query: 166 ------HPNELRCGSS---------NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
HP EL + VA++K N E P
Sbjct: 636 SDIPSIHPFELAVYENEIIFTDWVRRSVVAINKITGTDNRTLNRAIEVPNSIVYFLNSCV 695
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
S C KC+ + + DG Q CA C+ E
Sbjct: 696 SGTENACFNNDLKCEDYCRLMADG--------------QPTCA-----------CNGERR 730
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
++D+ + + K C + +C S +CI + CD+ DC D DED
Sbjct: 731 LNSDNRTCTGERNEKK---CAENEFKCLHSDRCIRYEDTCDQFNDCPMFD-----DEDA- 781
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
KY S +C P CG+ C+ SK C+ DC+N DE
Sbjct: 782 KYCS--TRVCRPGYFTCGNG-LCIPESKVCNRVNDCTNFADEA 821
>gi|297664884|ref|XP_002810849.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8 [Pongo abelii]
Length = 959
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 145/339 (42%), Gaps = 50/339 (14%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 121 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 179
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 180 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 230
Query: 277 VDNTDEDWDKFHQCFNGQ----------VQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G VQ A S +C+ W CD + DC D +
Sbjct: 231 -DRSDEAAELCGRPGPGATSAPAACATAVQFACRSGECVHLGWRCDGDRDCK-----DKS 284
Query: 326 DEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC- 382
DE N L C +E +CG CV K C+ + DC +G DE +C
Sbjct: 285 DE-------ANCPLGTCRGDEFQCGDGT-CVLAIKRCNQEQDCPDGSDEAGCLQGLNECL 336
Query: 383 -ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 337 HNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCEC 396
Query: 441 TEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 397 YPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 432
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 559 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 616
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DCS D++DED C ++ C
Sbjct: 41 ECEKDQFQCR-NERCIPSVWRCDEDDDCS-----DHSDED-----DCPKKTCADSDFTC- 88
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 89 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 139
>gi|326678474|ref|XP_698845.4| PREDICTED: low-density lipoprotein receptor-related protein 1B,
partial [Danio rerio]
Length = 1573
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RCG+ ++C+ CD DC +G DE C +C PG+F CG G C +
Sbjct: 375 CTASQFRCGT-DECIPFWWKCDTVDDCGDGSDEPADCPEFKCQPGRFQCGTGLCALPPFI 433
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N + C +GQ +C +KCIP N C+ + DC D DE
Sbjct: 434 CDGENDC-GDNSDEANCDSYICLSGQFKCTHRQKCIPINLRCNGQDDCG-----DGEDET 487
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C Q QC + CI W+CDE+ DC+ N DE C P+
Sbjct: 488 DCPENTCSPSQFQCKSTMHCISKLWVCDEDPDCADGSDEANCDEK----------TCGPH 537
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E RC N C+ CDG+ DCS+ DE
Sbjct: 538 EFRC-KDNNCIPDHWRCDGQSDCSDNSDE 565
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C S+ C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 494 CSPSQFQCKSTMHCISKLWVCDEDPDCADGSDEANCDEKTCGPHEFRCKDNNCIPDHWRC 553
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC D SDE N C + CA + +CI + CD + DC+ DN+DE
Sbjct: 554 DGQSDC-SDNSDEENCKPVTCNSKNFICA-NGECISSRFRCDGDFDCT-----DNSDERG 606
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ H C Q QC L+ CI WLCD + DC T + N + + C NE
Sbjct: 607 CESH-CSEDQFQC-LNHLCISVKWLCDGQEDCKTGEDEANCSPA-NTAMTARPTACGLNE 663
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C CV ++ CDG+ DC++G DE
Sbjct: 664 YVC-VGGGCVLAAQRCDGQNDCADGSDE 690
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 136/301 (45%), Gaps = 44/301 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C NE C CV ++ CDG+ DC++G DE C +EC +F C CIP W+
Sbjct: 659 CGLNEYVC-VGGGCVLAAQRCDGQNDCADGSDEVD-CLSECKEDEFLCRNRAHCIPARWR 716
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIV 277
CD DCL D SDE N C +G + C + C WLCD E DC
Sbjct: 717 CDRVFDCL-DQSDEDN-----CDHGSLSCRADEFVCNNTLCKLLVWLCDGEDDCG----- 765
Query: 278 DNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DN+DED +K N +C + C+ +C+ DC DN+DED
Sbjct: 766 DNSDEDAHMCEKLPCPPNRPFRCRNDRVCLRSEQICNGANDCG-----DNSDEDHCVDVL 820
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNNKADC--ENL 385
C E C ++++C+A CD DC +G DE C + D ++
Sbjct: 821 KKPRPCGKTEFAC-ANHRCIADELQCDLFDDCEDGSDERDCKAYVDGACRGRPDLCGDDA 879
Query: 386 KCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C+H +P+ +C C G +N QC + +ECL+ G C Q CTN+ SY C+C
Sbjct: 880 FCNHNKTPS----VCQCKEGFQRNQKNRQCEEVNECLLFGICSQYCTNSKGSYRCTCDRN 935
Query: 444 Y 444
+
Sbjct: 936 F 936
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 109/214 (50%), Gaps = 21/214 (9%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIP 219
++ +C + +C +C+ ++ C+G+ DC +GEDE C+P QF C CI
Sbjct: 450 DSYICLSGQFKCTHRQKCIPINLRCNGQDDCGDGEDETDCPENTCSPSQFQCKSTMHCIS 509
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ W CD DC DGSDE N C + +C CIP +W CD + DCS DN
Sbjct: 510 KLWVCDEDPDC-ADGSDEANCDEKTCGPHEFRCK-DNNCIPDHWRCDGQSDCS-----DN 562
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ K C + CA + +CI + CD + DC+ DN+DE + SH
Sbjct: 563 SDEENCKPVTCNSKNFICA-NGECISSRFRCDGDFDCT-----DNSDERGCE--SH---- 610
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C ++ +C ++ C+++ CDG+ DC GEDE
Sbjct: 611 CSEDQFQC-LNHLCISVKWLCDGQEDCKTGEDEA 643
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 119/285 (41%), Gaps = 43/285 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C P +CG+ C CDG+ DC + DE + C GQF C KCIP + +
Sbjct: 415 CQPGRFQCGTG-LCALPPFICDGENDCGDNSDEANCDSYICLSGQFKCTHRQKCIPINLR 473
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DG DE + + C Q QC + CI W+CDE+ DC+ N DE
Sbjct: 474 CNGQDDC-GDGEDETDCPENTCSPSQFQCKSTMHCISKLWVCDEDPDCADGSDEANCDE- 531
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + +C CIP +W CD + DCS DN+DE+ K V C+
Sbjct: 532 ----KTCGPHEFRCK-DNNCIPDHWRCDGQSDCS-----DNSDEENCK-----PVTCNSK 576
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----------------------FCNNKAD 381
C ++ +C++ CDG DC++ DE C+ + D
Sbjct: 577 NFIC-ANGECISSRFRCDGDFDCTDNSDERGCESHCSEDQFQCLNHLCISVKWLCDGQED 635
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCD 426
C+ + CSP AM P N+ CV L CD
Sbjct: 636 CKTGEDEANCSPA-NTAMTARPTACGLNEYVCVGGGCVLAAQRCD 679
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 130/325 (40%), Gaps = 83/325 (25%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG--------------QFSCGMGKCIPESWK 223
C+++ CDG+ DC GEDE A C+P ++ C G C+ + +
Sbjct: 623 CISVKWLCDGQEDCKTGEDE-----ANCSPANTAMTARPTACGLNEYVCVGGGCVLAAQR 677
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC DGSDE + C+ +C + C CIP W CD DC +D +DED
Sbjct: 678 CDGQNDC-ADGSDEVD-CLSECKEDEFLCRNRAHCIPARWRCDRVFDC-----LDQSDED 730
Query: 284 WDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-- 335
C +G + C + C WLCD E DC DN+DED +H
Sbjct: 731 -----NCDHGSLSCRADEFVCNNTLCKLLVWLCDGEDDCG-----DNSDED-----AHMC 775
Query: 336 NAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ C PN RC + C+ + C+G DC + DE + LK P
Sbjct: 776 EKLPCPPNRPFRCRNDRVCLRSEQICNGANDCGDNSDEDHCV------DVLK-----KPR 824
Query: 395 PRGAMCFCPAGQN--PNKTQCVDADEC-----------LIDGSC---------DQTCTNT 432
P G F A ++ QC D+C +DG+C D C +
Sbjct: 825 PCGKTEFACANHRCIADELQCDLFDDCEDGSDERDCKAYVDGACRGRPDLCGDDAFCNHN 884
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVN 457
VC C EG+ + C VN
Sbjct: 885 KTPSVCQCKEGFQRNQKNRQCEEVN 909
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+E+A M G R L+T+N++ P+ L IDY LYW DS L+ + SVR DGS + V
Sbjct: 1115 IEEAAMDGSMRRVLITRNLRRPTGLAIDYYNQRLYWADSELSQIGSVRFDGSDSLV 1170
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C+D DEC C Q C NT+ S+ C C +GY RP + + ++ ++P +I +
Sbjct: 23 MCIDVDECSEQFPCSQQCVNTYGSFHCLCADGYQ-RPASNTHSCRSLSAEQPF-LILADH 80
Query: 472 VDIRRIHLNGS 482
+IR+I L+GS
Sbjct: 81 HEIRKISLDGS 91
>gi|149035744|gb|EDL90425.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor (predicted) [Rattus norvegicus]
Length = 1019
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 145/370 (39%), Gaps = 75/370 (20%)
Query: 165 CHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC----------- 212
C +L CG +S++CV S CDG+ DC G DE C C P +F C
Sbjct: 124 CPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCPTLCAPHEFQCSNRSCLASVFV 182
Query: 213 -----------------------------GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
G G CIPE W CDG DC ED SDE
Sbjct: 183 CDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERWVCDGQFDC-EDRSDEAAELCG 241
Query: 244 QCFNGQ----VQCA-------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
+ G CA S +CI W CD + DC D +DE C
Sbjct: 242 RAGQGTTATPAACAPTTQFTCRSGECIHLGWRCDGDRDCK-----DKSDEADCSPGPCRE 296
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
QC CI C++E DC +D +DE + P +C S +
Sbjct: 297 NDFQCG-DGTCILAIKRCNQERDC-----LDGSDE---AGCLQESTCEGPRRFQC-KSGE 346
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPN 409
CV K CD + DC + DE +C N CSH C+ G C CPAG Q +
Sbjct: 347 CVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLD 406
Query: 410 KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFS 469
+ C D DEC +C Q C N + C C GY + K+C AV S+IF+
Sbjct: 407 QKTCGDIDECQDPDACSQICVNYKGYFKCECHPGYEMDTLTKNCKAV---AGRSPSLIFT 463
Query: 470 STVDIRRIHL 479
+ ++RRI L
Sbjct: 464 NRHEVRRIDL 473
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 94/236 (39%), Gaps = 28/236 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE CT F+C G CIPE WKC
Sbjct: 44 CEEDQFRC-RNERCIPSVWRCDEDNDCSDNSDEDDCPKRTCTDSDFTCDNGHCIPERWKC 102
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC
Sbjct: 103 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCE--------- 152
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA---V 338
G + C PH + C C V + D+D
Sbjct: 153 ----------GGADEAGCPTLCAPHEFQCSNR-SCLASVFVCDGDDDCGDGSDERGCSDP 201
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C P E RCG C+ CDG+ DC + DE +A C+PT
Sbjct: 202 ACPPREFRCGGGGTCIPERWVCDGQFDCEDRSDEAAELCGRAGQGTTATPAACAPT 257
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + VS R RC N DL P +D
Sbjct: 532 LHSPEGLAVDWVHKHIYWTDSGNKTVSVATTDGRRRCTLFNR-----DLSEPRAIAVDPL 586
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 587 RGFMYWSDWGFQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSS 646
Query: 154 VRVDGSHNAVL 164
+ +G + +L
Sbjct: 647 IDFNGGNRKML 657
>gi|297668557|ref|XP_002812501.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Pongo abelii]
Length = 563
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
+WCD + + D + C ++ +C S+ QC+ CDG DC GEDE
Sbjct: 21 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 77
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C G CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 78 PASPACSSSEYICASGGCISASLKCNGEYDCA-DGSDEMD-CVTECKEDQFRCKNKAHCI 135
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 136 PIRWLCDGIHDC-----VDGSDEE-----NCDRGGNICRADEFLCNNSLCKLHFWVCDGE 185
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC DD DN+DED +
Sbjct: 186 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDDCGDNSDEDHCGGKLT 245
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 246 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 304
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N C D +ECL+ G+C C N SY
Sbjct: 305 AYCNQIKTS---------VFCRCKPGFQRNMKNRHCEDLNECLVFGTCSHQCINVEGSYK 355
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 356 CVCDQNFQER 365
>gi|194207437|ref|XP_001493081.2| PREDICTED: low-density lipoprotein receptor-related protein 8
[Equus caballus]
Length = 923
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 150/397 (37%), Gaps = 89/397 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N+ RC + +C+ CD DCS+ DE C F+C G CIPE W+C
Sbjct: 8 CEENQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCDDGHCIPERWRC 66
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST--DDIVDN 279
DG +C DGSDE TC Q C ++ C S KC+P +W CD E DC + D+
Sbjct: 67 DGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCESGADEAGCA 125
Query: 280 TDEDWDKFHQCFNGQVQCAL---------------------------------SKKCIPH 306
T +F QC N A+ CIP
Sbjct: 126 TLCAPHEF-QCSNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGDDGACIPE 184
Query: 307 NWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
W+CD + DC D+ + A + C S +CV L CDG
Sbjct: 185 RWVCDRQFDCEDRADEAAELCGRTGPGPTPAPAACAAAAQFAC-RSGECVHLGWRCDGDR 243
Query: 365 DCSNGEDEG--PF---------------------CNNKADC------------------E 383
DC + DE P CN + DC
Sbjct: 244 DCKDKSDEADCPLGTCRGDEFQCGDGTCVPAVKRCNQEQDCPDGSDEAGCLQGLNECLHN 303
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG ++ C D DEC +C Q C N + C C
Sbjct: 304 NGGCSHICTDLKIGFECTCPAGYRLLDQKTCGDIDECEDPDTCSQICVNYKGYFKCECHP 363
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C AV S+IF++ ++RRI L
Sbjct: 364 GYEMDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 397
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + + + L S DL P +D
Sbjct: 456 LHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGGRRHTLF-SRDLSEPRAIAVDPLQGFM 514
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+
Sbjct: 515 YWSDWGYQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFS 574
Query: 158 GSHNAVL 164
G + +L
Sbjct: 575 GGNRKML 581
>gi|119627145|gb|EAX06740.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_a [Homo sapiens]
Length = 904
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 93
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 94 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|65301119|ref|NP_001018064.1| low-density lipoprotein receptor-related protein 8 isoform 4
precursor [Homo sapiens]
Length = 904
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 DCEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCE----- 155
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
DE + A LC P+E +CG+ + A+
Sbjct: 156 GGADE------AGCATLCAPHEFQCGNRSCLAAV 183
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 47 CEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC-D 94
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 95 NGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|68144540|gb|AAH51836.2| Low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Homo sapiens]
Length = 904
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 93
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 94 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|297263966|ref|XP_001113916.2| PREDICTED: prolow-density lipoprotein receptor-related protein 1,
partial [Macaca mulatta]
Length = 369
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 52 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDERDCPEVTCAPNQFQCSITKRCIPRVW 111
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 112 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 168
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 169 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 216
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C ++ +C+A CDG DC++G DE
Sbjct: 217 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDE 246
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 87/169 (51%), Gaps = 15/169 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C PGQF C G C ++ CDG DC +D SDE N IH C Q +C + +CIP +
Sbjct: 13 KCRPGQFQCSTGICTNPAFICDGDNDC-QDNSDEANCDIHVCLPSQFKCTNTNRCIPGIF 71
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
C+ + +C D DE C Q QC+++K+CIP W+CD + DC VD
Sbjct: 72 RCNGQDNCG-----DGEDERDCPEVTCAPNQFQCSITKRCIPRVWVCDRDNDC-----VD 121
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE + + C +E RC S +C+ CDG+ DC +G DE
Sbjct: 122 GSDE----PANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDE 166
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 111/236 (47%), Gaps = 20/236 (8%)
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GP 199
++ CD + V+ + + C +E RC S +C+ CDG+ DC +G DE
Sbjct: 110 VWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGDGSDEPKE 169
Query: 200 FCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
C+ C P QF C +C+P W+CD DC D SDE + C + CA + +C
Sbjct: 170 ECDERTCEPYQFRCKNNRCVPGRWQCDYDNDCG-DNSDEESCTPRPCSESEFSCA-NGRC 227
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
I W CD + DC+ D +DE D +C Q QC S CIP W CD + DC
Sbjct: 228 IAGRWKCDGDHDCA-----DGSDEK-DCTPRCDMDQFQCK-SGHCIPLRWRCDADADC-- 278
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE + C +E +C ++ C L+ CDG+ DC + DE P
Sbjct: 279 ---MDGSDE---EACGTGVRTCPLDEFQCNNT-LCKPLAWKCDGEDDCGDNSDENP 327
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 101/216 (46%), Gaps = 29/216 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WK
Sbjct: 175 TCEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWK 233
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE
Sbjct: 234 CDGDHDCA-DGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDE- 284
Query: 284 WDKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 285 ----EACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR--- 332
Query: 338 VLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C PN RC + C+ + + CDG +C + DE
Sbjct: 333 FVCPPNRPFRCKNDRVCLWIGRQCDGMDNCGDETDE 368
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 100/214 (46%), Gaps = 24/214 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-MGKCIPE 220
V C PN+ +C + +C+ CD DC +G DE C C +F C G+CIP
Sbjct: 91 VTCAPNQFQCSITKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPA 150
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
WKCDG DC DGSDEP + C Q +C + +C+P W CD + DC D
Sbjct: 151 RWKCDGEDDCG-DGSDEPKEECDERTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----D 203
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N+DE+ C + CA + +CI W CD + DC+ D +DE
Sbjct: 204 NSDEESCTPRPCSESEFSCA-NGRCIAGRWKCDGDHDCA-----DGSDE------KDCTP 251
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ +C S C+ L CD DC +G DE
Sbjct: 252 RCDMDQFQC-KSGHCIPLRWRCDADADCMDGSDE 284
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 129/328 (39%), Gaps = 55/328 (16%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTL--ALEF 62
C Q QC+++K+CIP W+CD + DC VD +DE N T EF
Sbjct: 93 CAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDE--------PANCTQMTCGVDEF 139
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
++ C R +C +D + D P E DER +
Sbjct: 140 RCKDSGRCI-------PARWKCDGEDDCGDGSDEPKEE---CDERTCEPYQF------RC 183
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALS 182
N P DY+ D D T C +E C ++ +C+A
Sbjct: 184 KNNRCVPGRWQCDYDNDCGDNSDEESCTPRP-----------CSESEFSC-ANGRCIAGR 231
Query: 183 KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NT 240
CDG DC++G DE C C QF C G CIP W+CD DC+ DGSDE T
Sbjct: 232 WKCDGDHDCADGSDEKD-CTPRCDMDQFQCKSGHCIPLRWRCDADADCM-DGSDEEACGT 289
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+ C + QC + C P W CD E DC D D E+ +F N +C
Sbjct: 290 GVRTCPLDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPEECARFVCPPNRPFRCKND 346
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ C+ CD D+ D TDE+
Sbjct: 347 RVCLWIGRQCD-----GMDNCGDETDEE 369
>gi|119627146|gb|EAX06741.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_b [Homo sapiens]
Length = 963
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 93
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 94 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|16768036|gb|AAL28237.1| GH12891p [Drosophila melanogaster]
Length = 1952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 149/366 (40%), Gaps = 77/366 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPE 220
C N L+C +N CV CDG DC + DE P C F C +CIP
Sbjct: 131 TTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPA 190
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+W CDG DC + + P+ C + CF C + CIP ++CD + DC +
Sbjct: 191 TWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----L 244
Query: 278 DNTDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTD 326
DN+DED HQC + + C +K +CIP W+CD + DC VD D
Sbjct: 245 DNSDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGAD 297
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD----- 381
E+ + C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 298 ENTTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQ 356
Query: 382 ---CENLKCSHK---------CSPTPRGAMCF-----CPAGQNP-NKTQCVD-------- 415
C+N KC C C CP GQ QC+D
Sbjct: 357 EFTCQNFKCIRNQSRCDGEDDCGDHSDEVGCAKENITCPQGQFACTNGQCIDYNLVCNKY 416
Query: 416 ---ADE------CLID-------GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
ADE C +D C C +T Y C C EGY L DGK+C V+
Sbjct: 417 PDCADESDEPAHCNVDECAKVEINQCGHKCVDTLTGYYCDCNEGYKLLADGKACADVDEC 476
Query: 460 QDEPAS 465
++P +
Sbjct: 477 LEQPGA 482
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/332 (31%), Positives = 147/332 (44%), Gaps = 52/332 (15%)
Query: 178 CVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGK------CIPESWKC 224
C+ CDG DC + DE C+ E +F+C K CIP+ W C
Sbjct: 230 CIPRIYICDGDNDCLDNSDEDNRHQCNDRKCDEET---EFTCVENKSWQRAQCIPKKWIC 286
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
DG DC+ DG+DE NT +H C Q C + +CI W+CD + DC D
Sbjct: 287 DGDPDCV-DGADE-NTTLHNCATQQPCGEDMFTCG-NGRCINKGWICDHDNDCG-----D 338
Query: 279 NTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
TDE K+ C + C + KCI + CD E DC D++DE +
Sbjct: 339 GTDEGKFCNSKYKTCSAQEFTCQ-NFKCIRNQSRCDGEDDCG-----DHSDE---VGCAK 389
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK--ADCENLKCSHKCSP 393
+ C + C ++ QC+ + C+ PDC++ DE CN A E +C HKC
Sbjct: 390 ENITCPQGQFAC-TNGQCIDYNLVCNKYPDCADESDEPAHCNVDECAKVEINQCGHKCVD 448
Query: 394 TPRGAMCFCPAGQN--PNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRP-D 449
T G C C G + C D DECL G+C Q C+NT + C C E Y R D
Sbjct: 449 TLTGYYCDCNEGYKLLADGKACADVDECLEQPGACSQHCSNTPGGFYCKCDETYYERQND 508
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+C + P +IF++ +R + ++G
Sbjct: 509 EHTCKRKD---KIPPWLIFTNKYYVRNMSVDG 537
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 151/532 (28%), Positives = 208/532 (39%), Gaps = 110/532 (20%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL 69
+C S +CI +W CD + DC D +DED FKR T EF+ +N
Sbjct: 931 FKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKR----TCDPKTEFSCKN-GR 980
Query: 70 CFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWP 129
C Q C ND + D PA ++ G R P + P
Sbjct: 981 CIPQL-------WMCDFDNDCGDDSDEPAYMC------RQRNCTTGWQRCPGQSNYRCIP 1027
Query: 130 SSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP-NELRCGSSNQCVALSKFCDGK 188
L D D C + + + N C+P + +CG+ N+C+ CD
Sbjct: 1028 KWLFCDGKDD----CRDNSDEL-------PENCPKCNPETDFKCGN-NRCIPKQWMCDFA 1075
Query: 189 PDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DC + DE C EC+ +F CG GKCI W+CD DC D SDE + +Q
Sbjct: 1076 DDCGDASDENEAVCKGRYRECSESEFRCGNGKCISSRWQCDHEDDC-GDNSDEMHCEGYQ 1134
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD--EDWDKFHQCFNGQVQCALSKK 302
C NG QCA S CI + CD + DC D+ D + C + QC +
Sbjct: 1135 CKNGTFQCA-SGHCIASYFRCDGDRDCR--DMSDEVGCPPRFPGGRYCPESRFQCN-NNL 1190
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+ + LCD TDD D +DED N +C S+ +CVA + CDG
Sbjct: 1191 CVSLSDLCD-----GTDDCGDGSDEDPSVCSDFNCDTLR--RFQC-SNERCVARYQICDG 1242
Query: 363 KPDCSNGEDE-----------------------------GPFCNNKADC----ENLKCSH 389
+C +G DE C+ DC + L C H
Sbjct: 1243 VDNCGDGSDENNMTLCASKQKPCDLYTQYQCANKHCIERSQVCDFSDDCGDASDELGCHH 1302
Query: 390 --KCSPTPRGA-------------MCFCPAG---QNPNKTQCVDADECLI-DGSCDQTCT 430
CS RG +C C G NK +C D DECL +C C
Sbjct: 1303 TSSCSEANRGGCQQHCHNLTDGGYICTCYPGYIIAADNKKKCSDVDECLTRQHTCSHQCH 1362
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
N + +Y CSC EG+ L DG S V + E ++F + +IR ++ + S
Sbjct: 1363 NLNGTYSCSCREGFHL-TDGAS--GVCRAEKEDVILLFVNGQEIRGLNWHKS 1411
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFS 211
R D + + C ++ +C SS +C+ S CDG DC +G DE P C P +FS
Sbjct: 916 RSDEQNCDLPCPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFS 975
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDE 267
C G+CIP+ W CD DC +D SDEP Q C G +C + +CIP CD
Sbjct: 976 CKNGRCIPQLWMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDG 1034
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
+ DC DN+DE + +C + +CIP W+CD DC D +DE
Sbjct: 1035 KDDCR-----DNSDELPENCPKCNPETDFKCGNNRCIPKQWMCDFADDCG-----DASDE 1084
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + C +E RCG+ +C++ CD + DC + DE
Sbjct: 1085 N-EAVCKGRYRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 1127
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 855 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 913
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 914 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 967
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + + + +CIP W+CD + DC D++DE N C RC G
Sbjct: 968 CDPKTEFSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 1019
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 1020 QSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 1068
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 50 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCVYPPCVDGEFTCANGRCIPQAQVC 108
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 109 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 163
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 164 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 223
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 224 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 276
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 277 AQCIPKKWICDGDPDCVDGADENTTLHN 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 842 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 899
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE C +C S +CI +W CD + DC
Sbjct: 900 CTPSATICD-----GVDDCGDRSDEQNCDL-PCPLSDFKCKSSGRCILDSWRCDGDADCK 953
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED F C P + +C+ CD DC + DE +
Sbjct: 954 -----DGSDEDPAVCFKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 1005
Query: 378 NKADC 382
+ +C
Sbjct: 1006 RQRNC 1010
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIP 260
N C +F C G+CI W CDG DC ++ ++PN C H C + +C + +CI
Sbjct: 6 NNTCEASKFYCKNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN-NGRCIF 64
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD E DC D +DE + C +G+ CA + +CIP +C+ DC +
Sbjct: 65 KSWKCDHENDCK-----DGSDELGCVYPPCVDGEFTCA-NGRCIPQAQVCNGVNDCKDNA 118
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D T E C N L+C +N CV CDG DC + DE P +
Sbjct: 119 TSDETHERCPM-----NTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQR 173
Query: 381 DC--ENLKC-SHKCSPT 394
C + +C +H+C P
Sbjct: 174 TCPTNSFRCPNHRCIPA 190
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 1545 KIEVSWMDGSKRRPLITEMIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 1604
Query: 166 HPNELR 171
++LR
Sbjct: 1605 RGDQLR 1610
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 841 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 895
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 896 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 943
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 944 WRCDGDADCKDGSDEDPAVCFKRTCD 969
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 660 LQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 719
Query: 162 AVL 164
+
Sbjct: 720 HTV 722
>gi|41053668|ref|NP_956782.1| uncharacterized protein LOC393460 [Danio rerio]
gi|32766691|gb|AAH55236.1| Zgc:63759 [Danio rerio]
Length = 379
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C + CG NQCV+ CDGK DC NG DE C+ +F CG G+C+ S+
Sbjct: 104 CVSGQFSCGDRLNQCVSSRWRCDGKSDCENGADEQNCAQKNCSAEEFRCGSGQCVSLSFV 163
Query: 224 CDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC DGSDE T H C QC+ C+P W CD + DC+ D +D
Sbjct: 164 CDGDGDC-SDGSDEAACPTHTHTCGPTAFQCSSPAVCVPQLWACDGDPDCA-----DGSD 217
Query: 282 E-----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
E + C Q+QC S +C+P +W CD DCS D +DED +
Sbjct: 218 EWPQHCGGARARVCPEQQMQCR-SGECVPDSWRCDGAFDCS-----DRSDED-----NCT 266
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P++ C CV + CDG PDC + DE
Sbjct: 267 VHTCRPDDFLCADGG-CVPGLRQCDGHPDCGDRSDE 301
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 16/172 (9%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCA-LSKKCIPHN 262
C+ QFSCG GKCI W CD DC + + P C + C +GQ C +C+
Sbjct: 63 CSEQQFSCGNGKCITSRWVCDDADDCGDGSDELPEACRQKTCVSGQFSCGDRLNQCVSSR 122
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
W CD + DC + DE C + +C S +C+ +++CD + DCS
Sbjct: 123 WRCDGKSDCE-----NGADEQNCAQKNCSAEEFRCG-SGQCVSLSFVCDGDGDCS----- 171
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D +DE +H C P +C S CV CDG PDC++G DE P
Sbjct: 172 DGSDEAACPTHTHT---CGPTAFQCSSPAVCVPQLWACDGDPDCADGSDEWP 220
>gi|61744471|ref|NP_004622.2| low-density lipoprotein receptor-related protein 8 isoform 1
precursor [Homo sapiens]
gi|259016389|sp|Q14114.4|LRP8_HUMAN RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
Flags: Precursor
Length = 963
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 DCEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCE----- 155
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
DE + A LC P+E +CG+ + A+
Sbjct: 156 GGADE------AGCATLCAPHEFQCGNRSCLAAV 183
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 47 CEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC-D 94
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 95 NGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>gi|405964329|gb|EKC29826.1| Low-density lipoprotein receptor-related protein 4 [Crassostrea
gigas]
Length = 2228
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 116/452 (25%), Positives = 184/452 (40%), Gaps = 75/452 (16%)
Query: 57 TLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD--------- 105
+A++F+ + + + +QQ +S L + +L+ +P P+ +D
Sbjct: 424 AIAVDFDPVEKQIYWTDNEQQFISRSYLDGTGLENLILG--VPRPDGIAIDAVNRKLYWT 481
Query: 106 ----ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSH 160
+ +E + + G NR +VT ++ P + +D +YWCD +N +E +DGS
Sbjct: 482 DTGKKEIEVSDLDGRNRKAIVTDHLYEPRDIAVDVKNKKIYWCDWGINPKIERANLDGSW 541
Query: 161 -----NAVLCHPNELRCGSSNQCVALSKFCDGKPDC-----SNGEDEGPFCNAECTPGQF 210
N L PN + +Q + + D + C ++G + F NA+
Sbjct: 542 RETLVNTSLGWPNGIALDVKSQTIY---WGDAQKSCIERANTDGSNRTTFLNAD------ 592
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+P + D L SD I + ++ +P + M+
Sbjct: 593 -------VPHIFGLSLLGDYLY-WSDWQKRTIER---------VNIYFLPDREILMTSME 635
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D K + C + Q C S +CI CD C +D +DE
Sbjct: 636 GLMDLKAFTIK---GKRNPCKSTQFMCR-SSQCIDKEQRCDGMAQC-----LDGSDEAGC 686
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCE--NLKC 387
+Y + +C ++ C S+ QC+ K CDG DC + DE G K C N C
Sbjct: 687 RY--TDVHICSIDQFHC-SNGQCIGNQKKCDGVGDCEDQSDERGCDSTGKTSCTLGNGGC 743
Query: 388 SHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
C C C G + +C D DEC +GSC Q CTNT SY CSC GY
Sbjct: 744 DQICEMKQTSVHCSCHQGYQLLGDWRRCQDIDECQWEGSCSQRCTNTQGSYNCSCVPGYQ 803
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L+ DG+ C A + A +IF++ VDIRR+
Sbjct: 804 LKTDGRGCKA----EGGKAYLIFANRVDIRRV 831
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 110/213 (51%), Gaps = 20/213 (9%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPE 220
+ C +E +C S +C++++ CD K DC N EDE C + C +F+C G CI
Sbjct: 191 LFCGVHEFQCLHSKRCISMALQCDMKNDCGNWEDEMD-CGMQQLCGGHEFACQNGSCIST 249
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W CDG +DC ED SDE N + Q G + CI NW+CD ++DC D +
Sbjct: 250 NWVCDGDIDC-EDKSDENNCRMQQLCGGHEFACQNGSCISTNWVCDGDIDCE-----DKS 303
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE+ QC + Q++C + CI + CD DC DN+DE + ++N C
Sbjct: 304 DENNCTIAQCTSEQLKCD-TGFCIAKSKRCDGNYDCP-----DNSDE---RNCTYNDTKC 354
Query: 341 H-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +CG+ +C+++ C+G +C +G DE
Sbjct: 355 NGAASFQCGNG-KCISVPIVCNGMDNCGDGTDE 386
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/222 (34%), Positives = 102/222 (45%), Gaps = 21/222 (9%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
+ G ++ V PN L + C+ CD DC N DE C C F+C
Sbjct: 21 QTSGGNSEVCLCPNHLFSCGNCICIPHHWVCDKDNDCGNNSDE-LTCGPSCPDEYFTCQN 79
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+C+ +SW CDG DC D SDE N C N + QC + KCIP W CD + DC
Sbjct: 80 HRCVKQSWLCDGDNDC-SDNSDEINCGTVLTKNCTNQEFQCQ-NGKCIPQKWKCDHDDDC 137
Query: 272 STDDIVDNTDED-WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C Q QC CI ++W CD + DCS + D D D
Sbjct: 138 G-----DKSDEICSDSPTTCGANQYQCG-DGMCIHNSWRCDRDQDCSAGE--DEQDCHAD 189
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ F C +E +C S +C++++ CD K DC N EDE
Sbjct: 190 QLF------CGVHEFQCLHSKRCISMALQCDMKNDCGNWEDE 225
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 100/216 (46%), Gaps = 31/216 (14%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWK 223
P+E +++CV S CDG DCS+ DE G CT +F C GKCIP+ WK
Sbjct: 71 PDEYFTCQNHRCVKQSWLCDGDNDCSDNSDEINCGTVLTKNCTNQEFQCQNGKCIPQKWK 130
Query: 224 CDGFVDCLEDG----SDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CD DC + SD P TC +QC +G CI ++W CD + DCS +
Sbjct: 131 CDHDDDCGDKSDEICSDSPTTCGANQYQCGDGM--------CIHNSWRCDRDQDCSAGE- 181
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D D D+ C + QC SK+CI CD + DC N +++ D
Sbjct: 182 -DEQDCHADQLF-CGVHEFQCLHSKRCISMALQCDMKNDCG------NWEDEMDCGMQQ- 232
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
LC +E C + C++ + CDG DC + DE
Sbjct: 233 --LCGGHEFAC-QNGSCISTNWVCDGDIDCEDKSDE 265
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 116/271 (42%), Gaps = 35/271 (12%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM---- 214
S + C N+ +CG C+ S CD DCS GEDE +C Q CG+
Sbjct: 146 SDSPTTCGANQYQCGDG-MCIHNSWRCDRDQDCSAGEDE-----QDCHADQLFCGVHEFQ 199
Query: 215 ----GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+CI + +CD DC + DE + + Q G + CI NW+CD ++D
Sbjct: 200 CLHSKRCISMALQCDMKNDC-GNWEDEMDCGMQQLCGGHEFACQNGSCISTNWVCDGDID 258
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D +DE+ + Q G + CI NW+CD ++DC D +DE+
Sbjct: 259 CE-----DKSDENNCRMQQLCGGHEFACQNGSCISTNWVCDGDIDCE-----DKSDEN-- 306
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENLKC 387
+ C +L+C + C+A SK CDG DC + DE N C + +C
Sbjct: 307 ---NCTIAQCTSEQLKC-DTGFCIAKSKRCDGNYDCPDNSDERNCTYNDTKCNGAASFQC 362
Query: 388 SH-KCSPTPRGAMCFCPAGQNPNKTQCVDAD 417
+ KC P G ++T CVD D
Sbjct: 363 GNGKCISVPIVCNGMDNCGDGTDETDCVDED 393
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL-- 164
++EK+ M G NR +V + +P+ L IDY LYW D+ L+ +E+ +G H AVL
Sbjct: 1879 KIEKSYMDGTNRKVIVNTGLGFPNGLCIDYEMQRLYWVDAKLDKIETSDFNGEHRAVLIN 1938
Query: 165 --CHPNEL 170
HP L
Sbjct: 1939 DIIHPFGL 1946
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+E+A M G+NR L+ +++ WP+ LVID + W D+ + + S +DGS+ VL
Sbjct: 1573 RIERAWMDGQNRKVLIDRDLGWPNGLVIDKPTRRMIWADARMEIIGSSDLDGSNRKVLLK 1632
Query: 166 ---HPNEL 170
HP L
Sbjct: 1633 GVKHPYGL 1640
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK GM G++R ++ ++WP+ L +D + LYW D+ + +E VDG + VL
Sbjct: 1266 KIEKIGMDGKSRKVIIRSGLKWPNGLALDIETETLYWTDAGTSRIECSTVDGHNRKVL 1323
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----N 161
++E++ M G R + + ++ WP+ L +DY D LYW D+ + +E +DGS N
Sbjct: 957 KIERSYMDGSRRVVITSTSLFWPNGLTLDYATDKLYWADAKHHVIECANLDGSFRRTVIN 1016
Query: 162 AVLCHPNEL 170
L HP L
Sbjct: 1017 TGLPHPFAL 1025
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 22/121 (18%)
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE---IFPLD---------------ER 107
N L F ++ ++ V L D++ +P + + LD ++
Sbjct: 1431 NNFLIFARRTDIRKVSLDVEYFADVV----MPVRQLRNVIALDVDTINRKVYWTDTVLDK 1486
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A + G +++ + P LV+D +YW D+ LN +E V GS VL
Sbjct: 1487 IMRANLDGSQEEEIISNGLDTPDGLVVDSVGQKIYWTDTGLNRIEVADVKGSMRKVLFWK 1546
Query: 168 N 168
N
Sbjct: 1547 N 1547
>gi|270005745|gb|EFA02193.1| hypothetical protein TcasGA2_TC007849 [Tribolium castaneum]
Length = 2121
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN CG +C+ CD DCS+G DE CT GQF+C G+CI E WKC
Sbjct: 1107 CPPNYFVCGDG-KCLPQYWKCDYDYDCSDGSDEVDCPKQNCTDGQFTCKNGRCIAEKWKC 1165
Query: 225 DGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNT 280
DG DC DGSDE N H C + + QC + KCIP W CD E DC D +
Sbjct: 1166 DGENDC-RDGSDELNCEPVEPHVCKSEEFQCKVGGVKCIPSTWQCDGEKDCR-----DGS 1219
Query: 281 DEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWD 330
DE K + C + Q C + +CI W+CD +E++C+T I D +D D
Sbjct: 1220 DEMNCKNNTCLDIQFSCGEPNNRCIYKTWVCDGDKDCPNGSDEVNCTTPAIPDTSDAT-D 1278
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ N C RC + +C+ CD DC +G DE
Sbjct: 1279 QFIPKNGT-CQDWMFRC-QNQRCIPYWWKCDQADDCGDGSDE 1318
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C + CV CDG+ DC + DE C P F CG GKC+P+ WKC
Sbjct: 1068 CSSNHFTC-RNGLCVPKGWKCDGEDDCGDSSDEAHCGMQSCPPNYFVCGDGKCLPQYWKC 1126
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-- 282
D DC DGSDE + C +GQ C + +CI W CD E DC D +DE
Sbjct: 1127 DYDYDC-SDGSDEVDCPKQNCTDGQFTCK-NGRCIAEKWKCDGENDCR-----DGSDELN 1179
Query: 283 -DWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC + KCIP W CD E DC D +DE + C
Sbjct: 1180 CEPVEPHVCKSEEFQCKVGGVKCIPSTWQCDGEKDCR-----DGSDE-----MNCKNNTC 1229
Query: 341 HPNELRCGS-SNQCVALSKFCDGKPDCSNGEDE 372
+ CG +N+C+ + CDG DC NG DE
Sbjct: 1230 LDIQFSCGEPNNRCIYKTWVCDGDKDCPNGSDE 1262
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 132/321 (41%), Gaps = 60/321 (18%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A I+ +D R + + +HG+ ++++N + ++ +YW D N +
Sbjct: 918 DYIAERIYWVDARQDYIASSDLHGDFLKIIISQNDVVSHPFAVAVFKNTMYWDDWKRNAI 977
Query: 152 ESVRVDGSHNAVL------------CHPNELRCGSSNQCVAL--SKFCDGKPD------C 191
S D H + + + L+ G +N C A S C KP C
Sbjct: 978 FSADKDTYHGVEILQKQLPGLMDLKVYAHGLQVG-TNACTASKCSYICVSKPKKNSSCLC 1036
Query: 192 SNGEDEG-----------PFCNAECTPGQ-------FSCGMGKCIPESWKCDGFVDCLED 233
+G + P N C P Q F+C G C+P+ WKCDG DC D
Sbjct: 1037 PDGMEYNNGRCLCPGHVPPLANFTCPPVQNTCSSNHFTCRNGLCVPKGWKCDGEDDC-GD 1095
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE + + C C KC+P W CD + DCS D +DE C +G
Sbjct: 1096 SSDEAHCGMQSCPPNYFVCG-DGKCLPQYWKCDYDYDCS-----DGSDEVDCPKQNCTDG 1149
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSN- 351
Q C + +CI W CD E DC D +DE + + H +C E +C
Sbjct: 1150 QFTCK-NGRCIAEKWKCDGENDCR-----DGSDELNCEPVEPH---VCKSEEFQCKVGGV 1200
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ + CDG+ DC +G DE
Sbjct: 1201 KCIPSTWQCDGEKDCRDGSDE 1221
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 99/247 (40%), Gaps = 59/247 (23%)
Query: 164 LCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPE 220
+C E +C +C+ + CDG+ DC +G DE N C QFSCG +CI +
Sbjct: 1187 VCKSEEFQCKVGGVKCIPSTWQCDGEKDCRDGSDEMNCKNNTCLDIQFSCGEPNNRCIYK 1246
Query: 221 SWKCDGFVDCLEDGSDEPN---------------------TCIHQCFNGQVQCALSKKCI 259
+W CDG DC +GSDE N TC F Q Q +CI
Sbjct: 1247 TWVCDGDKDC-PNGSDEVNCTTPAIPDTSDATDQFIPKNGTCQDWMFRCQNQ-----RCI 1300
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE--------------DWDKFHQCFNGQVQCALSKKCIP 305
P+ W CD+ DC D +DE C N Q +C + CI
Sbjct: 1301 PYWWKCDQADDCG-----DGSDELGCFPSHAPTPKSTTTPPVTTCGNNQFEC-MGGTCIF 1354
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W+CD DC + D+ C +E +C C+ L+ C+ +PD
Sbjct: 1355 SSWVCDGMEDCVGGE---------DERHCEGVRNCTKDEFKCHVDGSCIPLAAVCNRQPD 1405
Query: 366 CSNGEDE 372
C + DE
Sbjct: 1406 CPDLTDE 1412
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN-------------AECTPGQFSCGMG 215
RC + +C+ CD DC +G DE G F + C QF C G
Sbjct: 1292 FRC-QNQRCIPYWWKCDQADDCGDGSDELGCFPSHAPTPKSTTTPPVTTCGNNQFECMGG 1350
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CI SW CDG DC+ G DE + + C + +C + CIP +C+ + DC
Sbjct: 1351 TCIFSSWVCDGMEDCV-GGEDERHCEGVRNCTKDEFKCHVDGSCIPLAAVCNRQPDCP-- 1407
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSK--------KCIPHNWLCDEEMDC 316
D+ D + D H NG + SK C P LCD +DC
Sbjct: 1408 DLTDESLCD----HNLPNGPATPSCSKGYFPCDGGSCYPLAALCDGRVDC 1453
>gi|321451319|gb|EFX63012.1| hypothetical protein DAPPUDRAFT_269232 [Daphnia pulex]
Length = 739
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 159/393 (40%), Gaps = 84/393 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PF-CNAECTPGQFSC-GMGK 216
V C ++ +C + CV++ CDG DC + DE P+ C E G++SC
Sbjct: 341 VGCTSSQFQC-INGGCVSIHYNCDGDADCRDRSDEPDSCPPYVCKGE---GEYSCPNPHH 396
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCD--------E 267
CIP S CDG DC++ ++ + H C + Q C+ S IP W+ D E
Sbjct: 397 CIPRSAVCDGQADCIDKLNEANCSSTHSMCSSTQFYCSHSHIYIPLTWVRDRDSDWQHGE 456
Query: 268 EMDCSTDDIVDN--------------------------TDEDW-----DKFHQ------- 289
+ D S D V N TD D D F +
Sbjct: 457 DEDSSVCDSVVNKPPCPINYLRCPQRPDCMPRIECEHGTDADLCAKLNDSFIETETEKPD 516
Query: 290 CFNGQVQCAL-SKKCIPH----------NWLCDEEMDCS--TDDIVDNTDEDWDKYFSHN 336
C + Q C L S +CIP +W+CD DCS D+ + + S
Sbjct: 517 CLSSQYNCFLGSNECIPITSRCDCRIYISWVCDGLSDCSNSADEALLLCPANVSTSSSST 576
Query: 337 AVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+ C + C S +CV S CDGK DC +G DEG C KA N +C C P
Sbjct: 577 TKITRSCSATDFMC-LSGECVQASSVCDGKFDCFDGTDEGSGCA-KACQNNGQCPQICVP 634
Query: 394 TPRGAMCFCPAGQNP--NKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
P C C G N QCVD DEC + C Q C NT Y CSC GY+L PD
Sbjct: 635 GPMEPTCLCEPGYESLNNGKQCVDIDECAFEFNKCSQFCNNTKGGYRCSCASGYSLEPDQ 694
Query: 451 KSCTAVN------VPQDEPASIIFSSTVDIRRI 477
+C A + V + P I+ +S + R
Sbjct: 695 ITCKAASGRPMLIVATNHPVEILLNSDITSSRF 727
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP----NTCIHQCFNGQ 249
GED+ A+C + CIP ++CDG DC G DE T C + Q
Sbjct: 296 GEDKHVCTKADC--------VASCIPAKFRCDGVNDCARLGEDELQCRNTTTEVGCTSSQ 347
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN-GQVQCALSKKCIPHN 307
QC ++ C+ ++ CD + DC D +DE D + C G+ C CIP +
Sbjct: 348 FQC-INGGCVSIHYNCDGDADCR-----DRSDEPDSCPPYVCKGEGEYSCPNPHHCIPRS 401
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+CD + DC +D +E S +C + C S+ + L+ D D
Sbjct: 402 AVCDGQADC-----IDKLNE---ANCSSTHSMCSSTQFYCSHSHIYIPLTWVRDRDSDWQ 453
Query: 368 NGEDE 372
+GEDE
Sbjct: 454 HGEDE 458
>gi|321452425|gb|EFX63813.1| hypothetical protein DAPPUDRAFT_267643 [Daphnia pulex]
Length = 747
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 159/393 (40%), Gaps = 84/393 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PF-CNAECTPGQFSC-GMGK 216
V C ++ +C + CV++ CDG DC + DE P+ C E G++SC
Sbjct: 349 VGCTSSQFQC-INGGCVSIHYNCDGDADCRDRSDEPDSCPPYVCKGE---GEYSCPNPHH 404
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCD--------E 267
CIP S CDG DC++ ++ + H C + Q C+ S IP W+ D E
Sbjct: 405 CIPRSAVCDGQADCIDKLNEANCSSTHSMCSSTQFYCSHSHIYIPLTWVRDRDSDWQHGE 464
Query: 268 EMDCSTDDIVDN--------------------------TDEDW-----DKFHQ------- 289
+ D S D V N TD D D F +
Sbjct: 465 DEDSSVCDSVVNKPPCPINYLRCPQRPDCMPRIECEHGTDADLCAKLNDSFIETETEKPD 524
Query: 290 CFNGQVQCAL-SKKCIPH----------NWLCDEEMDCS--TDDIVDNTDEDWDKYFSHN 336
C + Q C L S +CIP +W+CD DCS D+ + + S
Sbjct: 525 CLSSQYNCFLGSNECIPITSRCDCRIYISWVCDGLSDCSNSADEALLLCPANVSTSSSST 584
Query: 337 AVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+ C + C S +CV S CDGK DC +G DEG C KA N +C C P
Sbjct: 585 TKITRSCSATDFMC-LSGECVQASSVCDGKFDCFDGTDEGSGCA-KACQNNGQCPQICVP 642
Query: 394 TPRGAMCFCPAGQNP--NKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
P C C G N QCVD DEC + C Q C NT Y CSC GY+L PD
Sbjct: 643 GPMEPTCLCEPGYESLNNGKQCVDIDECAFEFNKCSQFCNNTKGGYRCSCASGYSLEPDQ 702
Query: 451 KSCTAVN------VPQDEPASIIFSSTVDIRRI 477
+C A + V + P I+ +S + R
Sbjct: 703 ITCKAASGRPMLIVATNHPVEILLNSDITSSRF 735
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 80/185 (43%), Gaps = 20/185 (10%)
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP----NTCIHQCFNGQ 249
GED+ A+C ++ CIP ++CDG DC G DE T C + Q
Sbjct: 296 GEDKHVCTKADCVGDEWFKCRASCIPAKFRCDGVNDCARLGEDELQCRNTTTEVGCTSSQ 355
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN-GQVQCALSKKCIPHN 307
QC ++ C+ ++ CD + DC D +DE D + C G+ C CIP +
Sbjct: 356 FQC-INGGCVSIHYNCDGDADCR-----DRSDEPDSCPPYVCKGEGEYSCPNPHHCIPRS 409
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+CD + DC +D +E S +C + C S+ + L+ D D
Sbjct: 410 AVCDGQADC-----IDKLNE---ANCSSTHSMCSSTQFYCSHSHIYIPLTWVRDRDSDWQ 461
Query: 368 NGEDE 372
+GEDE
Sbjct: 462 HGEDE 466
>gi|62088994|dbj|BAD92944.1| low density lipoprotein-related protein 1B variant [Homo sapiens]
Length = 1720
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 653 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 709
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 710 PASPTCSSREYICASDGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 767
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 768 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 817
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 818 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 877
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 878 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 936
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 937 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 987
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 988 CVCDQNFQER 997
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 438 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 496
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 497 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 550
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 551 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 600
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 601 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 628
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 516 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 575
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 576 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 628
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 629 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 676
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 677 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 705
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 478 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 536
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 537 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 590
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 591 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTLK 639
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 640 DFLCANGD-CVSSRFWCDGDFDCADGSDE 667
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 73/154 (47%), Gaps = 15/154 (9%)
Query: 340 CHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCS 392
C E C SS +C+ CD K DC +G DE N+ + + CS C
Sbjct: 5 CKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVSGCSQDCQ 64
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+GY ++PD
Sbjct: 65 DLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPD 123
Query: 450 G-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C +++ DE +I + +IR+I +GS
Sbjct: 124 NPNGCKSLS---DEEPFLILADHHEIRKISTDGS 154
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DG
Sbjct: 1173 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDG 1223
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 103/268 (38%), Gaps = 37/268 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 276 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 331
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ G +AL+ F D ++G+ + A T G + SW
Sbjct: 332 NQDIPGV----IALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----IYSWHAITD 381
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+ + +P+ H C C+ L H C + D+
Sbjct: 382 IQ-VYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT------- 433
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q +C + KCIP W CD + DD D +DE D C P
Sbjct: 434 -CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEFRCQPGR 482
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+CG+ C + CDG+ DC + DE
Sbjct: 483 FQCGTG-LCALPAFICDGENDCGDNSDE 509
>gi|324499441|gb|ADY39759.1| Prolow-density lipoprotein receptor-related protein 1 [Ascaris suum]
Length = 2642
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 155/571 (27%), Positives = 203/571 (35%), Gaps = 160/571 (28%)
Query: 12 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFN-HRNQSLC 70
C + KC+P W+CD + DC D DE + G EF Q C
Sbjct: 1229 CHNTFKCLPFWWVCDGQDDCG-----DMEDERF---------GIKGACPEFKCELGQMAC 1274
Query: 71 FIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMH----GENRSPLVTKNI 126
++ N +SV + I D D P E DE+ E + G+ + +K I
Sbjct: 1275 KVKSPNDTSVCIGPQDICD--GKVDCPLGE----DEKTELCSSYQCSDGQFKCSNSSKCI 1328
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSS------NQCVA 180
P + V D D D H E +CG N C+
Sbjct: 1329 --PKAAVCDGTDDCGNGADEQ------------------HCGEKQCGGGRFRCDENACIP 1368
Query: 181 LSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
CDG PDC+N DE C+ C +F C G+CIP WKCDG DC DG DE
Sbjct: 1369 EMNVCDGHPDCANARDENEQMCSQRTCLESEFRCTSGRCIPFGWKCDGQNDC-SDGGDEK 1427
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------TDDIVDNTDEDWDKF--- 287
+ C +C Q C + +CI +W+CD E DC D IV D D F
Sbjct: 1428 D-CPVECEPDQFACKSNARCIAKSWVCDGERDCEDGSDEVDCGDGIVITPDCDGGNFRCA 1486
Query: 288 ---------------------------HQCFNGQVQCAL-SKKCIPHNWLCDEEMDCSTD 319
H C N C L S KCI + +CD +DC
Sbjct: 1487 DGSGCLRPSQKCDGHRDCADFSDEIGCHTCANDTFACGLPSSKCISQHQVCDRVIDCE-- 1544
Query: 320 DIVDNTDEDWDKYFSH-----NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D +DE + FS+ + C GS+ C+ S CDG P C NG DE P
Sbjct: 1545 ---DASDELYCSCFSNMGHGFTSFRCFNGNATKGSTLYCIQRSMVCDGTPQCPNGHDEDP 1601
Query: 375 -------------------------FCNNKADCE------NLKCSHKCSPTPRGAMCFCP 403
FC+ +DCE N C+ C + R C
Sbjct: 1602 RVCALHDCGDNHLKCANNRCYPQAGFCDGVSDCEDDSDEKNAFCNKTCRNSFR---CVTT 1658
Query: 404 AGQNPNKTQCVDADEC-------------LID--GSCDQTCTNTHLSYVCSCTEGYTLRP 448
P QC D+C L D G+C Q C C+C GY+
Sbjct: 1659 GRCVPYTKQCDGHDDCGDGSDEFDCDITNLCDQFGTCSQECHPKKPLIKCACAPGYSREY 1718
Query: 449 DGK-SCTAVNVPQDEPASIIFSSTVDIRRIH 478
+ C A EPA + + VD R +H
Sbjct: 1719 WSRDQCKATG---SEPAKV---AVVDSRIMH 1743
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 128/306 (41%), Gaps = 36/306 (11%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKCDGF 227
E C S+ +C+ CDG DC +G DE C C F C G CIP W+CDG
Sbjct: 613 EHTCTSTGKCLDKRWRCDGNDDCGDGSDEHD-CEGLCDEKNHFMCSNGNCIPIEWRCDGT 671
Query: 228 VDCLEDG-----SDEPN------TCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS 272
DC++ G SDE + C G+ +C + +CIP CD E DC
Sbjct: 672 DDCMDGGQHGTSSDEKGCDDSLLVLLRSCKQGEFRCNGTTGGPVQCIPRRHFCDGENDCD 731
Query: 273 TDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE QC Q +C S +CIP NW C+ DCS D TDE +
Sbjct: 732 -----DGSDEPPTCDRRQCTAWQFRCG-SGQCIPRNWTCNGIRDCS-----DGTDEAEEL 780
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
+ C C ++ C+ + C+ K DC + DE C +C + C C
Sbjct: 781 CSDPSRGSCGAMMFHC-ANGVCIDAALVCNSKNDCGDNSDEPALCRVD-ECVDAACEENC 838
Query: 392 SPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTC-TNTHLSYVCSCTEGYTLR 447
P C C + +K C+ D+C D C Q C + + C C GY L
Sbjct: 839 VNLPISYRCECTPPRVVSKHDNRSCILRDQCE-DFPCSQHCLSKGDNRFECGCDPGYKLA 897
Query: 448 PDGKSC 453
PD ++C
Sbjct: 898 PDRRTC 903
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 109/234 (46%), Gaps = 27/234 (11%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAEC 205
+ R +G+ C P++ C ++ +C+ CDG+ DC + EDE G +C
Sbjct: 1208 AQGFRAEGNKCKPDCKPSDFICHNTFKCLPFWWVCDGQDDCGDMEDERFGIKGACPEFKC 1267
Query: 206 TPGQFSCGMGK------CIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKC 258
GQ +C + CI CDG VDC ++ C +QC +GQ +C+ S KC
Sbjct: 1268 ELGQMACKVKSPNDTSVCIGPQDICDGKVDCPLGEDEKTELCSSYQCSDGQFKCSNSSKC 1327
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +CD TDD + DE QC G+ +C CIP +CD DC+
Sbjct: 1328 IPKAAVCD-----GTDDCGNGADEQHCGEKQCGGGRFRCD-ENACIPEMNVCDGHPDCA- 1380
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N ++ ++ S C +E RC +S +C+ CDG+ DCS+G DE
Sbjct: 1381 -----NARDENEQMCSQRT--CLESEFRC-TSGRCIPFGWKCDGQNDCSDGGDE 1426
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 106/244 (43%), Gaps = 26/244 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPESW 222
C NE C ++C+ + CD DC GEDE FC C G F CG G CIP +
Sbjct: 392 CALNEWACSGGSKCIPYEETCDMVKDCPQGEDEHQEFCARRICRDGYFPCGNGLCIPMAK 451
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 281
+CD DC ++ DE + C + +C S C+P CD +MDC+ D +
Sbjct: 452 RCDKVNDC-KNYQDEVDC---DCAQDEFKCD-SGMCVPIGVRCDFKMDCNDASDEMQCPP 506
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-- 339
+ + + C + +CI WLCD DC D DE+ + L
Sbjct: 507 RNCSEVKALGQRMINCGRTTQCIIPAWLCDGSNDC-----WDGWDEEKCPAIHKVSPLGT 561
Query: 340 -------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
C E RC S+ C+ + CDG DC++G DE +C D E L+ H C+
Sbjct: 562 LRPKVENCTEYEHRCNSTGTCIPIVWICDGHRDCADGSDEN-YCRKTCD-EELE--HTCT 617
Query: 393 PTPR 396
T +
Sbjct: 618 STGK 621
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 64/128 (50%), Gaps = 17/128 (13%)
Query: 165 CHPNELRC----GSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIP 219
C E RC G QC+ FCDG+ DC +G DE P C+ +CT QF CG G+CIP
Sbjct: 700 CKQGEFRCNGTTGGPVQCIPRRHFCDGENDCDDGSDEPPTCDRRQCTAWQFRCGSGQCIP 759
Query: 220 ESWKCDGFVDCLEDGSDEP-----NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+W C+G DC DG+DE + C CA + CI +C+ + DC
Sbjct: 760 RNWTCNGIRDC-SDGTDEAEELCSDPSRGSCGAMMFHCA-NGVCIDAALVCNSKNDCG-- 815
Query: 275 DIVDNTDE 282
DN+DE
Sbjct: 816 ---DNSDE 820
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 121/305 (39%), Gaps = 60/305 (19%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL--- 164
+EKA G R ++T++I+ P+++ ID+ LYW D+ L+ +E ++G H VL
Sbjct: 217 IEKAFFSGYGREKIITEDIRTPNAIAIDFMARKLYWSDARLDKIERCDLNGKHREVLIRG 276
Query: 165 ---------CHPNELRCGSS---------NQCVALSKFCDG--KPDCSN-GEDEGPFCNA 203
HP L + + VA++K G +P +N E
Sbjct: 277 NDSSPMGHPAHPFGLSLLGNTLFFTDWIHHAVVAVNKLTGGETRPLRANITEQPMGVVAV 336
Query: 204 ECTPGQFSCGMGKCIPESWKCD--------GFVDCLEDGSDEPN----TCIHQ----CFN 247
+ P Q CG+ C C+ G C +G N TC Q C
Sbjct: 337 DSLPDQ--CGLDACTTTDLGCEDECRLTATGKPHCACNGERRLNPDNKTCSGQILSACAL 394
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+ C+ KCIP+ CD DC ++ +++ C +G C + CIP
Sbjct: 395 NEWACSGGSKCIPYEETCDMVKDCPQG---EDEHQEFCARRICRDGYFPCG-NGLCIPMA 450
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
CD+ DC + D D D C +E +C S CV + CD K DC+
Sbjct: 451 KRCDKVNDCK--NYQDEVDCD-----------CAQDEFKC-DSGMCVPIGVRCDFKMDCN 496
Query: 368 NGEDE 372
+ DE
Sbjct: 497 DASDE 501
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 114/296 (38%), Gaps = 49/296 (16%)
Query: 95 DLPAPEIFPLDERLEKAG---MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D +F D L+ G G+NR ++TK+++ L + +D LYW D TV
Sbjct: 1082 DTTTRRVFWGDGHLDYIGSSDYDGDNRRTVLTKSVKHIFGLAV--FEDFLYWTDWTNRTV 1139
Query: 152 ESV-RVDGSHNAVLCHPNELR-CGSSNQCVALSKFCDGKP---DCSNGEDEGPFCNAECT 206
E ++ G V+ + R G L DG+ C C A
Sbjct: 1140 ERAHKITGEMRTVILNFTHYRPMGVKIVHPLLQMTADGQHLSHPCRKANRCDNICLASKN 1199
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+F+C C + E N C C C + KC+P W+CD
Sbjct: 1200 QDEFTC----------------VCAQGFRAEGNKCKPDCKPSDFICHNTFKCLPFWWVCD 1243
Query: 267 EEMDCSTDDIVDNTDEDWD-----KFHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDC 316
+ DC D DE + +C GQ+ C + + CI +CD ++DC
Sbjct: 1244 GQDDCG-----DMEDERFGIKGACPEFKCELGQMACKVKSPNDTSVCIGPQDICDGKVDC 1298
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE + S+ C + +C +S++C+ + CDG DC NG DE
Sbjct: 1299 PLGE-----DEKTELCSSYQ---CSDGQFKCSNSSKCIPKAAVCDGTDDCGNGADE 1346
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------------ 105
LA+++ RN C ++S ++ + +L L P LD
Sbjct: 991 LAVDWLARNIYWCDKDGDSISVADMKGLYRHTILKGDPLQEPRAIVLDPMASVLFWSDWG 1050
Query: 106 ER--LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
ER + + M G NR ++T +++WP++L +D ++W D HL+ + S DG +
Sbjct: 1051 ERPHIGRMDMDGANRRLIITSSLRWPNALAVDTTTRRVFWGDGHLDYIGSSDYDGDNRRT 1110
Query: 164 L 164
+
Sbjct: 1111 V 1111
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E + + G R L I PSSL +D + LYW D TVE++ + G ++
Sbjct: 1903 IESSNLDGSERHTLALNGIYAPSSLSVDEPNNRLYWSDVEKGTVETITLTGKDRRIV 1959
>gi|393906948|gb|EJD74460.1| calcium binding EGF domain-containing protein [Loa loa]
Length = 943
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 153/406 (37%), Gaps = 109/406 (26%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIPESWKCDGFVDCL 231
+C+ + CDG+PDC + DE N C QF C K CIP +WKCDG DC+
Sbjct: 103 RCIPKTWVCDGEPDCRDSSDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCDGQNDCV 162
Query: 232 EDGSDEPN--------TCIHQCFNG----------------------------------- 248
D SDE + T QC NG
Sbjct: 163 -DMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHGKCPNTTCDATE 221
Query: 249 QVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+ QC CIP W+CD +EMDCS V N + H F + C
Sbjct: 222 KFQCRSGGTCIPRMWVCDGEADCKDRSDEMDCSDIGAVINQNPHVVTCHHSF--EFPCRN 279
Query: 300 SKKCIPHNWLCDEEMDCS----------------------------------TDDIVDNT 325
CI W CD EMDC+ DD +D T
Sbjct: 280 GGHCINKAWKCDGEMDCADGSDEENCDKPACAANERTCDMGKCISASKWCDGFDDCLDGT 339
Query: 326 DEDWDKYFSHNAVLCHPN-ELRC-GSSNQCVALSKFC-DGKP--DCSNGEDEGPFCNNKA 380
DE D C N E RC G+ QC+ L C DGKP DC F N +
Sbjct: 340 DEK-DCTLPVKQENCDENTEYRCPGTPLQCIKLEDLCVDGKPNNDCLKSVCSSHF--NLS 396
Query: 381 DCENLKCSH-KCSPTP-RGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
C+++ +H KC T G +C CP G C+D DEC G C Q C N YVC
Sbjct: 397 LCDDISNNHCKCRTTKFNGTICHCPRGFELKGRSCIDIDECAQIGICAQKCINVPGGYVC 456
Query: 439 SCTEGYTL---RPDGKSCTAVNVPQDEPAS--IIFSSTVDIRRIHL 479
C GY L R G + + + + + + ++ S+ IRR L
Sbjct: 457 ECYPGYHLTMGRSIGNTNKSAGICRAKGSDPLLLLSNRATIRRFDL 502
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 109/273 (39%), Gaps = 77/273 (28%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-----GM------- 214
N+ +C ++ +C+ LS CDG DC G+DE C T +F C G+
Sbjct: 39 NQYKC-NNGKCIPLSWRCDGDEDCPEGDDEDKCSRISCKTDREFECVGDSTGLSLYASKM 97
Query: 215 ----GKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCD 266
+CIP++W CDG DC D SDE TC F + ++ CIP W CD
Sbjct: 98 RDYPARCIPKTWVCDGEPDC-RDSSDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCD 156
Query: 267 EEMDCSTDDIVDNTDE-DWDKFH-------QCFNG------------------------- 293
+ DC VD +DE D K QC NG
Sbjct: 157 GQNDC-----VDMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHGK 211
Query: 294 ----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHN--AVLC 340
+ QC CIP W+CD E DC D D D D + N V C
Sbjct: 212 CPNTTCDATEKFQCRSGGTCIPRMWVCDGEADCK--DRSDEMDCSDIGAVINQNPHVVTC 269
Query: 341 HPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
H + E C + C+ + CDG+ DC++G DE
Sbjct: 270 HHSFEFPCRNGGHCINKAWKCDGEMDCADGSDE 302
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 30/146 (20%)
Query: 202 NAEC-TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA------- 253
N EC T Q+ C GKCIP SW+CDG DC E ++ + I + + +C
Sbjct: 32 NKECSTDNQYKCNNGKCIPLSWRCDGDEDCPEGDDEDKCSRISCKTDREFECVGDSTGLS 91
Query: 254 --------LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC----ALSK 301
+CIP W+CD E DC D++DE + C Q C ++
Sbjct: 92 LYASKMRDYPARCIPKTWVCDGEPDCR-----DSSDEKGCQNITCEKDQFVCEEYKGHAR 146
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDE 327
CIP W CD + DC VD +DE
Sbjct: 147 MCIPMTWKCDGQNDC-----VDMSDE 167
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 161 NAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
+ V CH + E C + C+ + CDG+ DC++G DE C + +C MGKCI
Sbjct: 265 HVVTCHHSFEFPCRNGGHCINKAWKCDGEMDCADGSDEENCDKPACAANERTCDMGKCIS 324
Query: 220 ESWKCDGFVDCLEDGSDE 237
S CDGF DCL DG+DE
Sbjct: 325 ASKWCDGFDDCL-DGTDE 341
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 104 LDERLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
L +E+AGM G NR+ +++ + I+WP+ L +D + LYW D+ + + S G H
Sbjct: 636 LSAHIERAGMDGNNRTVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIR 695
Query: 163 VLCHPNE 169
++ +E
Sbjct: 696 LVLRSHE 702
>gi|62702319|gb|AAX93243.1| unknown [Homo sapiens]
Length = 1126
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 390 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 446
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 447 PASPTCSSREYICASDGCISASLKCNGEYDCA-DGSDEMD-CVTECKEDQFRCKNKAHCI 504
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK------KCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 505 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 554
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 555 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 614
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 615 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 673
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 674 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 724
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 725 CVCDQNFQER 734
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 175 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 233
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 234 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 287
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 288 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 337
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 338 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 365
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 253 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 312
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 313 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 365
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 366 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 413
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 414 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 442
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 215 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 273
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 274 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 327
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 328 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 376
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 377 DFLCANGD-CVSSRFWCDGDFDCADGSDE 404
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DG
Sbjct: 910 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDG 960
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 100/274 (36%), Gaps = 49/274 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 13 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 68
Query: 168 NELRCGSSNQCVALSKF------CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
N+ G +AL+ F DGK A T G + S
Sbjct: 69 NQDIPGV----IALTLFEDYIYWTDGKTK--------SLSRAHKTSGADRLSL----IYS 112
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVD 278
W + + +P+ H C C+ L H C + D+
Sbjct: 113 WHAITDIQ-VYHSYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT- 170
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C Q +C + KCIP W CD + DD D +DE D
Sbjct: 171 -------CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDDC----PEF 213
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P +CG+ C + CDG+ DC + DE
Sbjct: 214 RCQPGRFQCGTG-LCALPAFICDGENDCGDNSDE 246
>gi|49823250|gb|AAT68691.1| megalin [Didelphis virginiana]
Length = 1117
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 149/330 (45%), Gaps = 32/330 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + C+ CD DC + DE C PG F C G C+PE +KC
Sbjct: 209 CSESEFRC-DNQHCIPSRWICDHDNDCEDNSDERDCELRTCHPGYFQCNSGHCVPERFKC 267
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DCL D SDE +C + NG A +C H +C + + D D D
Sbjct: 268 DGSADCL-DFSDEA-SCPTRYPNGTYCSATMFECKNH--VCIQPL-WKCDGDDDCGDSSD 322
Query: 285 DKFHQCFNG------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
++ H C + + +C + +CI + LC++E DC D +DE + +
Sbjct: 323 EELHLCLDNPCNPPFRFRCE-NNRCIYSHELCNQEDDCG-----DGSDEKPEHCLNSTTK 376
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKCSHKCSPTPR 396
C +E +CG+ + C+ LS CD DC N DE CN A+ C+ C H C+
Sbjct: 377 PCVEDEFKCGNGH-CIPLSYVCDNFDDCGNHFDETG-CNPGAERTCDENICEHNCTHLKE 434
Query: 397 GA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--G 450
G +C C G + ++ CVD +EC G C Q C N+ SY C C G+ D G
Sbjct: 435 GGFICSCRPGYSASPVDRNSCVDINECEQFGVCPQDCKNSKGSYECICANGFRSVGDHEG 494
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
K C A P ++ V IR+ +L+
Sbjct: 495 KQCAA----DGNPPILLLPDNVRIRKYNLS 520
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 103/245 (42%), Gaps = 61/245 (24%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
++ +C+ + CD + DC + DE + C PGQF C G+CIP+SWKCD DC
Sbjct: 52 ANKRCIPEAWQCDTEDDCGDNSDEDSAHCASRTCLPGQFKCDNGRCIPQSWKCDVDNDC- 110
Query: 232 EDGSDEPNTCIHQCFNGQVQ--------CALSKKCIPHNWLCD--------------EEM 269
D SDEP IH+C + C + +CIP +C+ EEM
Sbjct: 111 GDHSDEP---IHECMGPDYRCXNHTDFSCKTNYRCIPQWAVCNGYDDCRDNSDEQGCEEM 167
Query: 270 DC---------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
C + DD D +DE +C + +C ++ CIP W
Sbjct: 168 TCNPLGDFRCBNHHCIPLRWKCDAFDDCGDGSDEQNCTPRECSESEFRCD-NQHCIPSRW 226
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+CD + DC DN+DE CHP +C +S CV CDG DC +
Sbjct: 227 ICDHDNDCE-----DNSDER-----DCELRTCHPGYFQC-NSGHCVPERFKCDGSADCLD 275
Query: 369 GEDEG 373
DE
Sbjct: 276 FSDEA 280
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 100/221 (45%), Gaps = 33/221 (14%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPES 221
C + +C N C C+ DC +G DE N +C Q+ C +CIPE+
Sbjct: 2 YCQIGQFQCSDGN-CTNPHFLCNAVRDCPDGSDEEHVLCVNHQCEVHQWQCANKRCIPEA 60
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC ++ ++ C + C GQ +C + +CIP +W CD + DC D++
Sbjct: 61 WQCDTEDDCGDNSDEDSAHCASRTCLPGQFKCD-NGRCIPQSWKCDVDNDCG-----DHS 114
Query: 281 DEDWDKFHQCFNGQVQ--------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE H+C + C + +CIP +C+ DD DN+DE
Sbjct: 115 DE---PIHECMGPDYRCXNHTDFSCKTNYRCIPQWAVCN-----GYDDCRDNSDEQ---- 162
Query: 333 FSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C+P + RC ++ C+ L CD DC +G DE
Sbjct: 163 -GCEEMTCNPLGDFRC-BNHHCIPLRWKCDAFDDCGDGSDE 201
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW------DLPAPEI------------FPLDERLEKAGM 113
I + S+ R+ A+++ W D PA + + ++E+A M
Sbjct: 606 IYWSDASTNRIEVAKLDGRYRKWLISTQLDQPAAVVVNPKLGFMYWTDWGSQPKIERAWM 665
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
G+ R L++ ++ WP+ L IDY N D +YW DS N +ES++ DG+ ++
Sbjct: 666 DGQQRQTLISNDLGWPTGLSIDYLNNDRIYWSDSKENIIESMKHDGTDRRLV 717
>gi|260828981|ref|XP_002609441.1| hypothetical protein BRAFLDRAFT_93486 [Branchiostoma floridae]
gi|229294797|gb|EEN65451.1| hypothetical protein BRAFLDRAFT_93486 [Branchiostoma floridae]
Length = 973
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/359 (29%), Positives = 150/359 (41%), Gaps = 73/359 (20%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ + CDG+ DC +G DE A C P F C +C+P+ +CD DC D
Sbjct: 249 TNGRCIMEAWHCDGEDDCGDGSDEQDCRPATCPPQNFLCDGYRCLPDVRRCDQVQDCT-D 307
Query: 234 GSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+DE P+T + G + C S C+P W CD DC+ D D + C
Sbjct: 308 STDEDGCPDT-VCSTEQGLIPCQ-SGGCVPEQWRCDGHPDCA--DGSDEPPDCPTPTTTC 363
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-LCHPNELRCGS 349
+ CA + C+ +W+CD + DC DN+DE + AV C E C +
Sbjct: 364 QPTEFTCA-NGVCVSTSWVCDGQNDCG-----DNSDE---RSCEGGAVSTCQGGEFSC-A 413
Query: 350 SNQCVALSKFCDGKPDCSNGEDE---GPF-------------CNNKADCENLK----CSH 389
S C+ CDG DCS+GEDE G F C+ DC N+ C H
Sbjct: 414 SGVCIPDQWTCDGDADCSDGEDEEGCGEFSCGTHVCIPARWRCDGDNDCGNMSDEQDCVH 473
Query: 390 KCSPTPRGAMCFCPA----GQNP----------------NKTQCVDADE--------CLI 421
+ + TP A G + T C DA + C
Sbjct: 474 QATATPSAPQTTMAAWGECGSHEYQCLTRECLPLSQVCDGTTDCADASDEGGLCASVCQD 533
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+G C TC T VCSC G+ L DG +C PA ++FS+ +IR I+LN
Sbjct: 534 NGGCTGTCQATPGGRVCSCHPGFKLLEDGTTCAG------GPAKLLFSTGYEIRAINLN 586
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 67 QSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI 126
Q + Q N+ R + + W E ++E+A M NR +V +
Sbjct: 674 QHRAVLLQHNIDKPRAIALNMAERTLYWSEWGAE-----PKIERADMDSGNRKLIVATGL 728
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
WP++LV+D LY+ D+ L+ +E +G + L
Sbjct: 729 IWPNALVVDDILKRLYFADARLDKIEYCDYEGKNRVSL 766
>gi|332809037|ref|XP_003308157.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Pan troglodytes]
Length = 901
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 43 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 90
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 91 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 141
>gi|229442319|gb|AAI72899.1| low density lipoprotein-related protein 1B precursor [synthetic
construct]
Length = 1187
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF- 200
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 120 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 176
Query: 201 -CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 177 PASPTCSSREYICASDGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 234
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 235 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 284
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 285 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 344
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 345 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 403
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 404 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 454
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 455 CVCDQNFQER 464
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ +C ++ C++ CD PDC++ DE C P +F C CIP+ W+C
Sbjct: 24 CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKKTCGPHEFQCKNNNCIPDHWRC 83
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDE 282
D DC D SDE N C CA + C+ + CD + DC+ +D+ T
Sbjct: 84 DSQNDC-SDNSDEENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCADGSDERNCETSC 141
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D+F +C NGQ CIP W CD DC ED +K + C
Sbjct: 142 SKDQF-RCSNGQ--------CIPAKWKCDGHEDCK-------YGED-EKSCEPASPTCSS 184
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E C +S+ C++ S C+G+ DC++G DE
Sbjct: 185 REYIC-ASDGCISASLKCNGEYDCADGSDE 213
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 73/150 (48%), Gaps = 18/150 (12%)
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3 RCNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDE 56
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C + QC + CIP +W CD + DCS DN+DE+ K C
Sbjct: 57 ANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEENCK-----PQTCTL 105
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 106 KDFLCANGD-CVSSRFWCDGDFDCADGSDE 134
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DG
Sbjct: 640 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDG 690
>gi|341881883|gb|EGT37818.1| hypothetical protein CAEBREN_02651 [Caenorhabditis brenneri]
Length = 663
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 138/319 (43%), Gaps = 39/319 (12%)
Query: 169 ELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
E CG+ C+ + CD DC NG DE +C G F C GK + +KCDG
Sbjct: 34 EFDCGTGALGCLPKAWKCDNIKDCHNGADEVDCEPNDCPEGDFLCQNGKFMEHKYKCDGI 93
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC D SDE C + Q+ P N+ D + + DK
Sbjct: 94 PDC-SDFSDE-KFCEYNSRRLQLN-------TPFNF---------GDPNLYGNESGLDK- 134
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN--------TDEDWDKYFSHNAVL 339
+ C G CAL K CIP+ CD E C D + W ++
Sbjct: 135 NGCHPGFGFCALQKTCIPNKLFCDGEPHCFPDYEDERNCTPDGPAAAYKWSSCMDNSKFA 194
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C+ N + + C+ + + C+GK DC G+DE C ++C C ++C T G
Sbjct: 195 CNKN--KTWDNLVCIEMEEVCNGKKDCPLGDDETEKC---SECSTKHCQYQCKNTLTGPK 249
Query: 400 CFCPAGQ--NPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C C G + + CVD DEC L + +C C N S+ CSC +GY L+ DGKSC
Sbjct: 250 CVCEKGYRLDSDGFSCVDLDECTLPERACHHFCENRIGSFHCSCAKGYRLKADGKSCELS 309
Query: 457 NVPQDEPASIIFSSTVDIR 475
+ Q S++FS + +I+
Sbjct: 310 DTSQ---GSLLFSFSHEIK 325
>gi|432095316|gb|ELK26533.1| Low-density lipoprotein receptor-related protein 1B [Myotis
davidii]
Length = 1445
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQC-FNGQVQCALSK 301
C + QC CIP W CD E DC D +DE C + C +
Sbjct: 317 CNGNEFQCHPDGNCIPDLWRCDGEKDCE-----DGSDEKGCNGTLRLCDHKTKFSCRSTG 371
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFC 360
+CI W+CD ++DC D +DED FS C P + C + ++ C+ K C
Sbjct: 372 RCINKAWVCDGDIDCE-----DQSDEDDCDSFS-----CGPPKYPCANDTSVCLQPEKLC 421
Query: 361 DGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDAD 417
+G+ DC +G DEG C+ + N CS+ CS P RG +C CP G +K C D
Sbjct: 422 NGRRDCLDGSDEGDLCD-ECSLNNGGCSNHCSVVPGRGIVCSCPEGLQLHKDNKTCEIVD 480
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C C Q C + CSC EG+ L DG+SCT+++ + A IIFS +IRRI
Sbjct: 481 YCSNHLKCSQVCEQHKHTVKCSCYEGWKLAVDGESCTSIDPFE---AFIIFSIRHEIRRI 537
Query: 478 HLN 480
L+
Sbjct: 538 DLH 540
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GMGKCIP 219
C+ NE +C C+ CDG+ DC +G DE CN +FSC G+CI
Sbjct: 317 CNGNEFQCHPDGNCIPDLWRCDGEKDCEDGSDEKG-CNGTLRLCDHKTKFSCRSTGRCIN 375
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCSTDDIVD 278
++W CDG +DC ED SDE + C + CA + C+ LC+ DC +D
Sbjct: 376 KAWVCDGDIDC-EDQSDEDDCDSFSCGPPKYPCANDTSVCLQPEKLCNGRRDC-----LD 429
Query: 279 NTDE 282
+DE
Sbjct: 430 GSDE 433
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 1193 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLA 1252
Query: 166 HPN 168
N
Sbjct: 1253 GSN 1255
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 35/65 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ VE V G + +
Sbjct: 63 KVERCDMDGINRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVEVVDYQGKNRHTIIQ 122
Query: 167 PNELR 171
++R
Sbjct: 123 GRQVR 127
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG--MGKCIPESWK 223
H + C S+ +C+ + CDG DC + DE + C P ++ C C+
Sbjct: 361 HKTKFSCRSTGRCINKAWVCDGDIDCEDQSDEDDCDSFSCGPPKYPCANDTSVCLQPEKL 420
Query: 224 CDGFVDCLEDGSDEPNTC 241
C+G DCL DGSDE + C
Sbjct: 421 CNGRRDCL-DGSDEGDLC 437
>gi|405974498|gb|EKC39138.1| Low-density lipoprotein receptor-related protein 8 [Crassostrea
gigas]
Length = 901
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/406 (28%), Positives = 160/406 (39%), Gaps = 109/406 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C +E C S CV + CD + DC +G DE C N CT QFSCG G+CIP SW+
Sbjct: 34 CPEDEFTC-KSGHCVPMRWTCDKETDCLDGSDETDICQNKSCTMDQFSCGNGECIPASWR 92
Query: 224 CDGFVDCLE-------------------------------------DGSDEPNTCIHQCF 246
CDG DC D SDE + C
Sbjct: 93 CDGSPDCANGHDENCTSPTCASDEFRCDNSKCVNNKWRCDGDDDCGDKSDEKSCAPLTCT 152
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIP 305
+ QCA K+CI W CD + DC +D D ++ C + + QC ++CI
Sbjct: 153 AEEFQCA-DKQCIDQLWYCDGDPDC--NDQSDESNCTTSNTTICSSETEWQCRTGEQCIH 209
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC +D +DE N C P++ +C S + CV ++ CDG D
Sbjct: 210 SSWKCDNDEDC-----LDGSDE-----VDCNPT-CRPDQFKCDSGD-CVYVTLKCDGYID 257
Query: 366 CSNGEDEG--------------------------PFCNNKADCENLK------------- 386
C +G DE C+ + DC+N
Sbjct: 258 CVDGSDESNCSKTEKCPSNKFDCYNNGSVCIEPTKLCDTRMDCDNYADEENSLCENNACK 317
Query: 387 -----CSHKCSPTPR-GAMCFCPAGQNPNK-TQCVDADEC-LIDGSCDQTCTNTHLSYVC 438
C C P + C C G N T C D +EC C Q C N SY C
Sbjct: 318 YNNGGCMQTCIPIDKTNRRCECLHGFRLNGDTACEDINECDQWPPVCSQKCVNEKGSYKC 377
Query: 439 SCTEGY--TLRPDGKS-CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C GY + PDG+ C V E A ++F++ DIR++ ++G
Sbjct: 378 ECIPGYYPEILPDGQHICKGVG----EKAWLLFANRHDIRKLEVDG 419
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 85/190 (44%), Gaps = 39/190 (20%)
Query: 214 MGKCIPESWKCDGFVDCL--EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
M +CIP SW+CDG DC+ +D +DE N C + C S C+P W CD+E DC
Sbjct: 1 MHRCIPISWRCDGDYDCVDEDDKTDEENCPSRTCPEDEFTCK-SGHCVPMRWTCDKETDC 59
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD-------------CS 317
+D +DE D + C Q C + +CIP +W CD D C+
Sbjct: 60 -----LDGSDETDICQNKSCTMDQFSCG-NGECIPASWRCDGSPDCANGHDENCTSPTCA 113
Query: 318 TDDIV-DNT---DEDWDKYF-----------SHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+D+ DN+ + W S + C E +C + QC+ +CDG
Sbjct: 114 SDEFRCDNSKCVNNKWRCDGDDDCGDKSDEKSCAPLTCTAEEFQC-ADKQCIDQLWYCDG 172
Query: 363 KPDCSNGEDE 372
PDC++ DE
Sbjct: 173 DPDCNDQSDE 182
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 107 RLEKAGMHGE--NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ GM G +R+ +V NIQWP+ L +DY + +YW D+ L ++ + +DGS+ +
Sbjct: 545 KIERIGMDGNLNSRTTIVKDNIQWPNGLCLDYANEKVYWIDAKLKSIFAAELDGSNVKRI 604
Query: 165 CHPNE 169
H E
Sbjct: 605 LHNAE 609
>gi|426218727|ref|XP_004003589.1| PREDICTED: low-density lipoprotein receptor-related protein 8 [Ovis
aries]
Length = 959
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 125/449 (27%), Positives = 163/449 (36%), Gaps = 98/449 (21%)
Query: 113 MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC 172
M R P +T + P + C L V + C N+ RC
Sbjct: 1 MSRARRLPRLTMRFRRPLRVAEKEGLRARGMCPQRLVRVSRRVRGAPWSVKECEENQFRC 60
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
+ +C+ CD DCS+ DE C F+C G CI E WKCDG DC
Sbjct: 61 -RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCNDGHCIREWWKCDGEEDC-P 118
Query: 233 DGSDEPN-TCIHQ-CFNGQVQCALSK-KCIPHNWLCDEEMDC-STDDIVDNTDEDWDKFH 288
DGSDE TC Q C ++ C S KC+P +W CD E DC S D
Sbjct: 119 DGSDESEATCTKQVCPAEKLSCGPSSHKCVPASWRCDGEKDCESGADEAGCATLCAPHEF 178
Query: 289 QCFNGQVQCAL----------------------------------SKKCIPHNWLCDEEM 314
QC N A+ S +C+ W CD +
Sbjct: 179 QCSNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPPPPLRTPCRSGECVHLGWRCDGDR 238
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED--- 371
DC D +DE CH +E +CG CV K C+ + DC +G D
Sbjct: 239 DCK-----DKSDE-----ADCPLGTCHGDEFQCGDGT-CVPAIKRCNQEQDCPDGSDETG 287
Query: 372 -------EGP---------------FCNNKADCE------------------NLKCSHKC 391
EGP C+ + DC N CSH C
Sbjct: 288 CLQESTCEGPRRFQCKSGECVDGRKVCDAQRDCRDWSDEPLKECGLNECLHNNGGCSHIC 347
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CPAG Q ++ C D DEC +C Q C N + C C GY +
Sbjct: 348 TDLKIGFECTCPAGYQLLDQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYEMDTLT 407
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
K+C AV S+IF++ ++RRI L
Sbjct: 408 KNCKAV---AGRSPSLIFTNRHEVRRIDL 433
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EK+G++G R LV+ I+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 557 FQAKIEKSGLNGVGRQTLVSDGIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFNGGNRKM 616
Query: 164 L 164
L
Sbjct: 617 L 617
>gi|324506768|gb|ADY42882.1| Low-density lipoprotein receptor-related protein 4 [Ascaris suum]
Length = 641
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 139/344 (40%), Gaps = 42/344 (12%)
Query: 165 CH-PNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKC 217
CH NE CG +C+ + CD DC ++ C +C G F+C G+C
Sbjct: 31 CHDQNEFDCGYEEDGVRKCIPVEWKCDNMVDCRLNANDESGCRYIHQCPRGVFACRNGEC 90
Query: 218 IPESWKCDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
I +KC+GF DC E G E + QC Q +C CI + CD+ DC
Sbjct: 91 IDAVFKCNGFDDCGDGTDERGCKEQSRHEAQCPESQFRCR-KGPCITVHAKCDKVKDCPE 149
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD------------- 320
D ++ C + C CIP W CD +DC +
Sbjct: 150 GDDEEHCTPTAIN-GSCAEHEFMC--DNSCIPSTWKCDGIVDCRDGNDELKELCGLELEE 206
Query: 321 ---IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
++ + + S + C+ ++ C +C+ K CDG+ DC G DEG C
Sbjct: 207 EDELLSLPSREQYLHLSLKSSFCNASQYLC-EPGKCIPREKLCDGRKDCPRGNDEGGRC- 264
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNP--NKTQCVDADECLIDGS--CDQTCTNTH 433
+C CSH C+ P G +C C G+ + CVD +EC C C N
Sbjct: 265 --GECAAYGCSHMCTDRPDGPLCSCREGETLAFDGRICVDVNECETAAGHICSHKCINNE 322
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
+ C C EGY L D SC A D ++I FS ++R +
Sbjct: 323 GMFKCECFEGYDLGSDTHSCHA---KPDPYSAIFFSLGSEVRHM 363
>gi|13928141|dbj|BAB46965.1| apolipoprotein E receptor 2 [Mus musculus]
Length = 996
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 152/402 (37%), Gaps = 119/402 (29%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG--KCIPESWKCDGFVDCL 231
C+ CDG+ +C +G DE + EC + SCG KC+P SW+CDG DC
Sbjct: 90 GHCIPERWKCDGEEECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC- 148
Query: 232 EDGSDE---PNTCI---HQCFNG--------------------------------QVQCA 253
E G+DE P C QC N + +C
Sbjct: 149 EGGADEAGCPTLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCG 208
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG------------QVQCALSK 301
CIP W+CD + DC D +DE + + G Q C S
Sbjct: 209 GGGTCIPERWVCDRQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTAQFTCR-SG 262
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI W CD + DC D +DE + C NE +CG CV K C+
Sbjct: 263 ECIHLGWRCDGDRDCK-----DKSDE-----ADCSPGPCRENEFQCGDGT-CVLAIKRCN 311
Query: 362 GKPDCSNGEDE-------------------------GPFCNNKADCE------------- 383
+ DC +G DE G C+++ DC
Sbjct: 312 QERDCPDGSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLN 371
Query: 384 -----NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N +
Sbjct: 372 ECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFK 431
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 432 CECHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 470
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 141/382 (36%), Gaps = 86/382 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 41 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 99
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 100 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 158
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 159 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 218
Query: 309 LCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC +D+ + + A + C S +C+ L CDG DC
Sbjct: 219 VCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTC-RSGECIHLGWRCDGDRDC 277
Query: 367 SNGEDE-----GPFCNNKADCENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE GP N+ C + C C A C + + P +
Sbjct: 278 KDKSDEADCSPGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRF 337
Query: 412 QCVDAD----------------------------ECLI-DGSCDQTCTNTHLSYVCSCTE 442
QC + ECL +G C CT+ + + C+C
Sbjct: 338 QCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPA 397
Query: 443 GYTLRPDGKSCTAVNVPQDEPA 464
G+ L D K+C ++ QD A
Sbjct: 398 GFQLL-DQKTCGDIDECQDPDA 418
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+GP EC QF C +CIP W+CD DC D SDE + C + C +
Sbjct: 35 QGPV--KECEEDQFRCRNERCIPLVWRCDEDNDC-SDNSDEDDCPKRTCADSDFTCD-NG 90
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCA-LSKKCIPHNWLCDEE 313
CIP W CD E +C D +DE +C ++ C S KC+P +W CD E
Sbjct: 91 HCIPERWKCDGEEECP-----DGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGE 145
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
DC DE + LC P+E +C S+ C+A
Sbjct: 146 KDCE-----GGADE------AGCPTLCAPHEFQC-SNRSCLA 175
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 594 FQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 653
Query: 164 L 164
L
Sbjct: 654 L 654
>gi|332809035|ref|XP_513416.3| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 4 [Pan troglodytes]
Length = 960
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 100/337 (29%), Positives = 140/337 (41%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 123 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 181
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 182 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 232
Query: 277 VDNTDEDWDKFHQCFNGQVQCAL-----------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G S +C+ W CD + DC D +
Sbjct: 233 -DRSDEAAELCGRPGPGATSAPAACATAAQFACRSGECVHLGWRCDGDRDCK-----DKS 286
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 287 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 340
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 341 NGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 400
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 401 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 434
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 561 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 618
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 43 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC- 90
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 91 DNGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 141
>gi|291244677|ref|XP_002742221.1| PREDICTED: proteoliaisin-like [Saccoglossus kowalevskii]
Length = 2111
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 113/235 (48%), Gaps = 21/235 (8%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-G 198
+ Y CD ++ + AV C E C C+ LS CDG DCS+G DE
Sbjct: 1460 LSYMCDRIVDCQDGADEQTPLCAV-CARGEFAC-PDGSCIPLSNTCDGIADCSDGADEQT 1517
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKK 257
P C +CT +F+C G CIP S+KCDG VDC + G + TC + C + C
Sbjct: 1518 PLCT-DCTNEEFTCTDGSCIPLSYKCDGIVDCSDAGDESTLTCNLTPCIWAEYTCP-DGS 1575
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP ++ CD +DCS D DE C N + C CIP ++ CD +DCS
Sbjct: 1576 CIPLSYECDGIVDCS-----DGADEQTPLCTVCTNEEFTCT-DGSCIPLSYKCDGIVDCS 1629
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE + N C + C S+++C++ +FCDG DC +GEDE
Sbjct: 1630 -----DAGDE---STLTCNLTPCTLLQYEC-STDECISTDQFCDGVSDCPSGEDE 1675
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/292 (32%), Positives = 132/292 (45%), Gaps = 26/292 (8%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
+ Y CD ++ + AV C E C + C+ LS CDG DCS+G DE
Sbjct: 798 LSYMCDRIVDCQDGADEQTPLCAV-CARGEFAC-PDDSCIPLSNTCDGIADCSDGADEQT 855
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKC 258
+CT +F+C G CIP S+KCDG VDC + G + TC + C + C C
Sbjct: 856 QLCTDCTNEEFTCTDGSCIPLSYKCDGIVDCSDAGDESTLTCSLTPCTWAEYTCP-DGSC 914
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP ++ CD +DCS D DE C N + C CIP ++ CD +DCS
Sbjct: 915 IPLSYKCDGIVDCS-----DGADEQTPLCTVCTNEEFTCT-DGSCIPLSYECDGIVDCS- 967
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
D DE + +C E C + C+ LS CDG DCS+ DE N
Sbjct: 968 ----DGADEQ-----TPLCAVCTNEEFTC-TDGICIPLSYKCDGIVDCSDAGDESTLTCN 1017
Query: 379 KADCENLK--CS-HKCSPTPR--GAMCFCPAGQNPNKTQCVDADECLIDGSC 425
C L+ CS +C T + + CP+G++ C A+ +DGSC
Sbjct: 1018 LTPCTLLQYECSTGECISTDQLCDGISDCPSGEDETNCGCTWAEFTCLDGSC 1069
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 95/204 (46%), Gaps = 20/204 (9%)
Query: 176 NQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ LS CDG DCS+G DE P C A CT +F+C G CIP S+ CD VDC +DG
Sbjct: 754 GSCIPLSYECDGIVDCSDGADEQTPLC-AVCTNEEFTCTDGSCIPLSYMCDRIVDC-QDG 811
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+DE C G+ C CIP + CD DCS D DE C N +
Sbjct: 812 ADEQTPLCAVCARGEFACP-DDSCIPLSNTCDGIADCS-----DGADEQTQLCTDCTNEE 865
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C CIP ++ CD +DCS D DE + + C E C C+
Sbjct: 866 FTCT-DGSCIPLSYKCDGIVDCS-----DAGDE---STLTCSLTPCTWAEYTC-PDGSCI 915
Query: 355 ALSKFCDGKPDCSNGEDE-GPFCN 377
LS CDG DCS+G DE P C
Sbjct: 916 PLSYKCDGIVDCSDGADEQTPLCT 939
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 105/217 (48%), Gaps = 26/217 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPES 221
+C E C + C+ LS CDG DCS+G DE P C A CT +F+C G CIP S
Sbjct: 1288 TVCTNEEFTC-TDGSCIPLSYECDGIVDCSDGADEQTPLC-AVCTNEEFTCTDGICIPLS 1345
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+KCDG VDC + G + TC + C Q +C+ + +CI + LCD DC + + N
Sbjct: 1346 YKCDGIVDCSDAGDESTLTCNLTPCTLLQYECS-TGECISTDQLCDGISDCPSGEDETNC 1404
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
W +F C +G CIP ++ CD +DCS D DE + +C
Sbjct: 1405 GCTWAEF-TCLDG--------SCIPISYECDGIVDCS-----DGADEQ-----TPLCAVC 1445
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC 376
E C + C+ LS CD DC +G DE P C
Sbjct: 1446 TNEEFTC-TDGSCIPLSYMCDRIVDCQDGADEQTPLC 1481
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 124/268 (46%), Gaps = 37/268 (13%)
Query: 176 NQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ +S CDG DCS+G DE P C A CT +F+C G CIP S+KCDG VDC +
Sbjct: 454 GSCIPVSYECDGIVDCSDGADEQTPLC-AVCTNEEFTCTDGSCIPLSYKCDGIVDCPSEV 512
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+ P+TC C + + +CI + LCD DC + + N W +F C +G
Sbjct: 513 DESPHTCTDPCPAYECS---TGECISTDQLCDGISDCPSGEDETNCGCTWAEF-TCLDG- 567
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
CIP ++ CD +DCS D DE + +C E C + C+
Sbjct: 568 -------SCIPISYECDGIVDCS-----DGADEQ-----TPLCAVCTNEEFTC-TDGSCI 609
Query: 355 ALSKFCDGKPDCSNGEDEGPF-CNNKADCENLKCS-HKCSPTPR--GAMCFCPAGQNPNK 410
LS CDG DC + DE P C + C +CS +C T + + CP+G++
Sbjct: 610 PLSYKCDGIVDCPSEVDESPHTCTDP--CPAYECSTGECISTDQLCDGISDCPSGEDETN 667
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVC 438
C A+ DGSC LSY C
Sbjct: 668 CGCTWAEFTCPDGSC------IPLSYKC 689
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 127/276 (46%), Gaps = 46/276 (16%)
Query: 176 NQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ +S CDG DCS+G DE P C A CT +F+C G CIP S+KCDG VDC + G
Sbjct: 1067 GSCIPISYECDGIVDCSDGADEQTPLC-AVCTNEEFTCTDGICIPLSYKCDGIVDCSDAG 1125
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ TC + C Q +C+ + +CI + LCD DC + + N W ++ C +G
Sbjct: 1126 DESTLTCNLTPCTLLQYECS-TGECISTDQLCDGISDCPSGEDETNCGCTWAEY-TCPDG 1183
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
CIP ++ CD +DCS D DE + +C E C C
Sbjct: 1184 --------SCIPLSYECDGIVDCS-----DGADEQ-----TPLCTVCTNEEFTC-PDGSC 1224
Query: 354 VALSKFCDGKPDCSNGEDE-GPFC----NNKADCENLKC---SHKCSPTPRGAMCFCPAG 405
+ LS CDG DCS+G DE P C N + C + C S+KC + C G
Sbjct: 1225 IPLSYKCDGIVDCSDGADEQTPLCAVCTNEEFTCTDGICIPLSYKCD-----GIVDCSDG 1279
Query: 406 ---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
Q P T C + + DGSC LSY C
Sbjct: 1280 ADEQTPLCTVCTNEEFTCTDGSC------IPLSYEC 1309
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 121/256 (47%), Gaps = 32/256 (12%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C++ + CDG +C +GEDE N CT +F+C G CIP S+KCDG VDC +
Sbjct: 342 STGECMSTDQLCDGISNCPSGEDET---NCGCTWAEFTCPDGSCIPLSYKCDGIVDCSDA 398
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
G + TC C + + +CI + LCD DC + + N W +F C +G
Sbjct: 399 GDESTLTCTDPCPAYECS---TGECISTDQLCDGISDCPSGEDEANCGCTWAEF-TCPDG 454
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
CIP ++ CD +DCS D DE + +C E C + C
Sbjct: 455 --------SCIPVSYECDGIVDCS-----DGADEQ-----TPLCAVCTNEEFTC-TDGSC 495
Query: 354 VALSKFCDGKPDCSNGEDEGPF-CNNKADCENLKCS-HKCSPTPR--GAMCFCPAGQNPN 409
+ LS CDG DC + DE P C + C +CS +C T + + CP+G++
Sbjct: 496 IPLSYKCDGIVDCPSEVDESPHTCTDP--CPAYECSTGECISTDQLCDGISDCPSGEDET 553
Query: 410 KTQCVDADECLIDGSC 425
C A+ +DGSC
Sbjct: 554 NCGCTWAEFTCLDGSC 569
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 101/218 (46%), Gaps = 28/218 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPES 221
+C E C + C+ LS CDG DCS+G DE P C CT +F+C G CIP S
Sbjct: 1249 AVCTNEEFTC-TDGICIPLSYKCDGIVDCSDGADEQTPLCTV-CTNEEFTCTDGSCIPLS 1306
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
++CDG VDC DG+DE C N + C CIP ++ CD +DCS D D
Sbjct: 1307 YECDGIVDC-SDGADEQTPLCAVCTNEEFTCT-DGICIPLSYKCDGIVDCS-----DAGD 1359
Query: 282 EDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
E C Q +C+ + +CI + LCD DC + + N W ++ +
Sbjct: 1360 ESTLTCNLTPCTLLQYECS-TGECISTDQLCDGISDCPSGEDETNCGCTWAEFTCLDG-- 1416
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFC 376
C+ +S CDG DCS+G DE P C
Sbjct: 1417 ------------SCIPISYECDGIVDCSDGADEQTPLC 1442
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 97/199 (48%), Gaps = 28/199 (14%)
Query: 176 NQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ +S CDG DCS+G DE P C A CT +F+C G CIP S+KCDG VDC +
Sbjct: 567 GSCIPISYECDGIVDCSDGADEQTPLC-AVCTNEEFTCTDGSCIPLSYKCDGIVDCPSEV 625
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
+ P+TC C + + +CI + LCD DC + + N W +F C +G
Sbjct: 626 DESPHTCTDPCPAYECS---TGECISTDQLCDGISDCPSGEDETNCGCTWAEF-TCPDG- 680
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQC 353
CIP ++ CD +DCS D DE N + C P S+ +C
Sbjct: 681 -------SCIPLSYKCDGIVDCS-----DAGDE--------NTLTCTDPCPAYECSTGEC 720
Query: 354 VALSKFCDGKPDCSNGEDE 372
++ + CDG DC + EDE
Sbjct: 721 ISADQLCDGISDCPSNEDE 739
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 124/287 (43%), Gaps = 40/287 (13%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEG-PFCNAECTPGQFSCGMGKCIPE 220
+C ++C + +C+ + C+G + DCS+ DE C AEC G++ C G+C+P
Sbjct: 132 TVCGLVMIKCPADGECLISFEMCNGYEMDCSDNFDESTAICGAECGRGEYQCSDGRCLPT 191
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG+ DC++ G + P+ C C G ++C+ CI + CD +D N
Sbjct: 192 YWVCDGYGDCVDGGDEAPSICAG-CSVGFLKCS-DGTCISTDKACDG----IPNDCSGNY 245
Query: 281 DEDWDKFHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D D C NG C + +CI LCD DC V DE
Sbjct: 246 D---DSLELCRNGNTGCTQFACSTGECISQMNLCDGIADC-----VSGEDE--------T 289
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CS-HKCSP 393
C E C + C+ LS CDG DCS+ DE N C L+ CS +C
Sbjct: 290 NCGCSFAEFTC-TDGSCIPLSYKCDGIVDCSDAGDESTLTCNLTPCTLLQYECSTGECMS 348
Query: 394 TPR--GAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
T + + CP+G++ C A+ DGSC LSY C
Sbjct: 349 TDQLCDGISNCPSGEDETNCGCTWAEFTCPDGSC------IPLSYKC 389
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 176 NQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ LS CDG DCS+G DE P C CT +F+C G CIP S+KCDG VDC + G
Sbjct: 1574 GSCIPLSYECDGIVDCSDGADEQTPLCTV-CTNEEFTCTDGSCIPLSYKCDGIVDCSDAG 1632
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ TC + C Q +C+ + +CI + CD DC + + N +F C +G
Sbjct: 1633 DESTLTCNLTPCTLLQYECS-TDECISTDQFCDGVSDCPSGEDETNCGCTLAEF-TCLDG 1690
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--------------- 338
+CIP + CD +DC ++ + +N + D +H
Sbjct: 1691 --------RCIPLSSKCDGIVDCPSE-VDENPRKCPDPCPAHECSTGECIANFQICDGIR 1741
Query: 339 -------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+C E C C+ LS C+G DC +G DE PF
Sbjct: 1742 DCVNGEDELDCPNVCSEVEFAC-PQGGCIPLSSLCNGVDDCPSGADENPF 1790
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 99/235 (42%), Gaps = 58/235 (24%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C+A + CDG DC NGEDE C C+ +F+C G CIP S C+G DC
Sbjct: 1726 STGECIANFQICDGIRDCVNGEDELD-CPNVCSEVEFACPQGGCIPLSSLCNGVDDCPSG 1784
Query: 234 GSDEPNTC---------------IHQCFNGQVQC-------------------ALSKKCI 259
+ P C HQ +G + C LS CI
Sbjct: 1785 ADENPFRCGRFIHHECKSGESIEAHQFCDGTIDCESSEDELDCGTGCLESEYTCLSGHCI 1844
Query: 260 PHNWLCDEEMDCST--DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+CD +C+T D+ VD + ++F +C NG KCI ++CD + DC
Sbjct: 1845 SLFRVCDGVPNCATGEDESVDLCGCNVNQF-ECGNG--------KCILGEYVCDGDPDCP 1895
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
ED D A E +C ++ C+++ K CDG DC GEDE
Sbjct: 1896 YG-------EDEDDCGCDEA-----REFKCPTTGACISIIKVCDGISDCEYGEDE 1938
>gi|47117276|sp|Q924X6.2|LRP8_MOUSE RecName: Full=Low-density lipoprotein receptor-related protein 8;
Short=LRP-8; AltName: Full=Apolipoprotein E receptor 2;
Flags: Precursor
gi|162319136|gb|AAI56401.1| Low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [synthetic construct]
Length = 996
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 152/402 (37%), Gaps = 119/402 (29%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG--KCIPESWKCDGFVDCL 231
C+ CDG+ +C +G DE + EC + SCG KC+P SW+CDG DC
Sbjct: 90 GHCIPERWKCDGEEECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC- 148
Query: 232 EDGSDE---PNTCI---HQCFNG--------------------------------QVQCA 253
E G+DE P C QC N + +C
Sbjct: 149 EGGADEAGCPTLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCG 208
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG------------QVQCALSK 301
CIP W+CD + DC D +DE + + G Q C S
Sbjct: 209 GGGTCIPERWVCDRQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTAQFTCR-SG 262
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI W CD + DC D +DE + C NE +CG CV K C+
Sbjct: 263 ECIHLGWRCDGDRDCK-----DKSDE-----ADCSPGPCRENEFQCGDGT-CVLAIKRCN 311
Query: 362 GKPDCSNGEDE-------------------------GPFCNNKADCE------------- 383
+ DC +G DE G C+++ DC
Sbjct: 312 QERDCPDGSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLN 371
Query: 384 -----NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N +
Sbjct: 372 ECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFK 431
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 432 CECHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 470
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 141/382 (36%), Gaps = 86/382 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 41 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 99
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 100 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 158
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 159 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 218
Query: 309 LCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC +D+ + + A + C S +C+ L CDG DC
Sbjct: 219 VCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTC-RSGECIHLGWRCDGDRDC 277
Query: 367 SNGEDE-----GPFCNNKADCENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE GP N+ C + C C A C + + P +
Sbjct: 278 KDKSDEADCSPGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRF 337
Query: 412 QCVDAD----------------------------ECLI-DGSCDQTCTNTHLSYVCSCTE 442
QC + ECL +G C CT+ + + C+C
Sbjct: 338 QCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPA 397
Query: 443 GYTLRPDGKSCTAVNVPQDEPA 464
G+ L D K+C ++ QD A
Sbjct: 398 GFQLL-DQKTCGDIDECQDPDA 418
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+GP EC QF C +CIP W+CD DC D SDE + C + C +
Sbjct: 35 QGPV--KECEEDQFRCRNERCIPLVWRCDEDNDC-SDNSDEDDCPKRTCADSDFTCD-NG 90
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCA-LSKKCIPHNWLCDEE 313
CIP W CD E +C D +DE +C ++ C S KC+P +W CD E
Sbjct: 91 HCIPERWKCDGEEECP-----DGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGE 145
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
DC DE + LC P+E +C S+ C+A
Sbjct: 146 KDCE-----GGADE------AGCPTLCAPHEFQC-SNRSCLA 175
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 594 FQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 653
Query: 164 L 164
L
Sbjct: 654 L 654
>gi|324507361|gb|ADY43125.1| Low-density lipoprotein receptor-related protein 1B [Ascaris suum]
Length = 676
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 147/370 (39%), Gaps = 42/370 (11%)
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCH-PNELRCG----SSNQCVALSKFCDGKPDCSN 193
D++ L + S V+ CH NE CG +C+ + CD DC
Sbjct: 5 DVMTMSLVVLMLILSSSVNMGLGLGSCHDQNEFDCGYEEDGVRKCIPVEWKCDNMVDCRL 64
Query: 194 GEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCL----EDGSDEPNTCIHQCFN 247
++ C +C G F+C G+CI +KC+GF DC E G E + QC
Sbjct: 65 NANDESGCRYIHQCPRGVFACRNGECIDAVFKCNGFDDCGDGTDERGCKEQSRHEAQCPE 124
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
Q +C CI + CD+ DC D ++ C + C CIP
Sbjct: 125 SQFRCR-KGPCITVHAKCDKVKDCPEGDDEEHCTPTAIN-GSCAEHEFMC--DNSCIPST 180
Query: 308 WLCDEEMDCSTDD----------------IVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
W CD +DC + ++ + + S + C+ ++ C
Sbjct: 181 WKCDGIVDCRDGNDELKELCGLELEEEDELLSLPSREQYLHLSLKSSFCNASQYLC-EPG 239
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNP--N 409
+C+ K CDG+ DC G DEG C +C CSH C+ P G +C C G+ +
Sbjct: 240 KCIPREKLCDGRKDCPRGNDEGGRC---GECAAYGCSHMCTDRPDGPLCSCREGETLAFD 296
Query: 410 KTQCVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
CVD +EC C C N + C C EGY L D SC A D ++I
Sbjct: 297 GRICVDVNECETAAGHICSHKCINNEGMFKCECFEGYDLGSDTHSCHA---KPDPYSAIF 353
Query: 468 FSSTVDIRRI 477
FS ++R +
Sbjct: 354 FSLGSEVRHM 363
>gi|62630166|gb|AAX88911.1| unknown [Homo sapiens]
Length = 425
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/341 (31%), Positives = 152/341 (44%), Gaps = 50/341 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA-ECTPGQFSC-GMGKCIPES 221
C N+ C S+ +C++ CDG+ DC +G DE C A C FSC G C+P
Sbjct: 3 CSWNQFAC-SAQKCISKHWICDGEDDCGDGLDESDSICGAITCAADMFSCQGSRACVPRH 61
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CDG DC DGSDE +T CA + C + ++C ++ C V + D
Sbjct: 62 WLCDGERDC-PDGSDELST---------AGCAPNNTCDENAFMCHNKV-CIPKQFVCDHD 110
Query: 282 EDWDK---------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
+D + QC + CA + + W CD + DC D++DE
Sbjct: 111 DDCGDGSDESPQCGYRQCGTEEFSCADGRCLLNTQWQCDGDFDCP-----DHSDE----- 160
Query: 333 FSHNAVLCHPNELRCGSS------NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
+ C E C SS +C+ CD K DC +G DE N+ + +
Sbjct: 161 -APLNPKCKSAEQSCNSSFFMCKNGRCIPSGGLCDNKDDCGDGSDERNCHINECLSKKVS 219
Query: 387 -CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C CT+
Sbjct: 220 GCSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTD 278
Query: 443 GYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GY ++PD C +++ DE +I + +IR+I +GS
Sbjct: 279 GYEIQPDNPNGCKSLS---DEEPFLILADHHEIRKISTDGS 316
>gi|92331|pir||A30363 glycoprotein GP330, renal - rat (fragments)
Length = 972
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 105/216 (48%), Gaps = 25/216 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CHP+E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 269 MCHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEXXGCVPKTCSPTHFLCDNGNCIYKAW 328
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC + D D P H C + Q QC CI + LCD DC + T
Sbjct: 329 ICDGDNDCRDMSDEXDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDCP-----NGT 382
Query: 281 DEDWD----KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DE +C + +CA ++CIP W+CD+E DC DN+DE
Sbjct: 383 DEXXLCRNCVPRECSESEFRCA-DQQCIPSRWVCDQENDCG-----DNSDEX-----DCE 431
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CHP +C +S CVA + CDG+ DC + DE
Sbjct: 432 MKTCHPEHFQC-TSGHCVAKALACDGRADCLDASDE 466
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 99/221 (44%), Gaps = 20/221 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP----FCNAECTPGQFSCGMGKCIPE 220
C P+ C QC+ CD + DC +G DE ++ C F+C CIP+
Sbjct: 105 CSPSAFACVRGGQCIPGQWHCDRQNDCLDGSDEXKCPTHATSSTCPSTSFTCDNHVCIPK 164
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE N C Q +C +CI ++CD + DC+ D
Sbjct: 165 DWVCDTDNDC-SDGSDEXNCQASGTCQPTQFRCP-DHRCISPLYVCDGDKDCA-----DG 217
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE + C + Q +CA CI + CD DC DN+DE + +
Sbjct: 218 SDEXGCVLN-CTSAQFKCADGSSCINSRYRCDGVYDCR-----DNSDE--XGCPTRPPGM 269
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
CHP+E +C C+ + CDG PDC +G DE C K
Sbjct: 270 CHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEXXGCVPKT 310
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 116/301 (38%), Gaps = 34/301 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+ ++ C
Sbjct: 396 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDEXDCEMKTCHPEHFQCTSGHCVAKALAC 454
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE C + NG A + CI W+CD E DC VD
Sbjct: 455 DGRADCL-DASDE-XACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 507
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE CFN + +C + ++ DD D +DE
Sbjct: 508 SDE---XXXLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEXXXHCRKPTHKP 564
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNNKADCENLKC 387
C E +C + N C++ CD DC + DE C C C
Sbjct: 565 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDEXGCNLGDNRTCAENICEQNCTCAENIC 623
Query: 388 SHKCSPTPRGA-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
C+ G +C C G P +K C C G C Q+C N+ SY C C +G
Sbjct: 624 EQNCTQLSSGGFICSCRPGFKPSTLDKNSCX-XXXCEEFGICPQSCRNSKGSYECFCVDG 682
Query: 444 Y 444
+
Sbjct: 683 F 683
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 27/137 (19%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSW------DLPA-- 98
Y +R +G LA+++ R+ I + +S R+ A ++ W D PA
Sbjct: 690 YGERCPDG---LAVDWVGRH-----IYWSDANSQRIEVATLDGRYRKWLITTQLDQPAAI 741
Query: 99 ---PEI---FPLDE----RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSH 147
P++ F D+ ++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS
Sbjct: 742 AVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSK 801
Query: 148 LNTVESVRVDGSHNAVL 164
+ +E+++ DG+ ++
Sbjct: 802 EDVIEAIKYDGTDRRLI 818
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 94/248 (37%), Gaps = 58/248 (23%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
+C + +CA ++CIP W+CD+E DC DN+DE ++
Sbjct: 394 RECSESEFRCA-DQQCIPSRWVCDQENDCG-----DNSDE-------------XDCEMKT 434
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA-PEIFPLDERLEKAGMHGENRSPL 121
H C + + L C D L++ D A P FP A +N +
Sbjct: 435 CHPEHFQC--TSGHCVAKALACDGRADCLDASDEXACPTRFPNGTYCPAAMFECKNHVCI 492
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS-HNAVLCH------PNELRCGS 174
+ + CD E+ VDGS LC P RC +
Sbjct: 493 QS-----------------FWICDG-----ENDCVDGSDEXXXLCFNIPCESPQRFRCDN 530
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPF-----CNAECTPGQFSCGMGKCIPESWKCDGFVD 229
S +CV + C+G DC +G DE + CT ++ C G CI + + CD D
Sbjct: 531 S-RCVYGHQLCNGVDDCGDGSDEXXXHCRKPTHKPCTDTEYKCSNGNCISQHYVCDNVND 589
Query: 230 CLEDGSDE 237
C D SDE
Sbjct: 590 C-GDLSDE 596
>gi|431896907|gb|ELK06171.1| Low-density lipoprotein receptor-related protein 8 [Pteropus
alecto]
Length = 1001
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 108/334 (32%), Positives = 144/334 (43%), Gaps = 36/334 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--GKCIP 219
A LC P+E +C S+ C+A CDG DC +G DE + C P +F CG G CIP
Sbjct: 163 ATLCAPHEFQC-SNRTCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGDGGACIP 221
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----------SKKCIPHNWLCDEE 268
E W CD DC ED SDE + G S +C+ W CD +
Sbjct: 222 ERWVCDRQFDC-EDRSDEVAELCGRTGPGATSAPAACAIAAQFACRSGECVHLGWRCDGD 280
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + QC C+ LC++E DC D +DE
Sbjct: 281 HDCK-----DKSDEADCPLGTCRGDEFQCG-DGTCVSAIKLCNQEQDCP-----DGSDE- 328
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLK 386
+ P +C S +CV K CD + DC + DE + +C N
Sbjct: 329 --AGCLQESTCEGPRRFQC-KSGECVDGGKVCDAQRDCRDWSDEPLKESGLNECLHNNGG 385
Query: 387 CSHKCSPTPRGAMCFCPAGQNP-NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C+ G C CPAG ++ C D DEC +C Q C N + C C GY
Sbjct: 386 CSHICTDLKIGFECTCPAGYRLLDQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYE 445
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C AV S+IF++ ++RRI L
Sbjct: 446 MDTLTKNCKAV---AGRSPSLIFTNRHEVRRIDL 476
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 100/376 (26%), Positives = 137/376 (36%), Gaps = 87/376 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE C F+C G CIPE WKC
Sbjct: 46 CDEDQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCMDSDFTCDNGHCIPERWKC 104
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC-STDDIVDNT 280
DG +C DGSDE C Q C ++ C S KC+P +W CD E DC S D
Sbjct: 105 DGEEEC-SDGSDESEAACTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCESGADEAGCA 163
Query: 281 DEDWDKFHQCFNGQVQCAL---------------------------------SKKCIPHN 307
QC N A+ CIP
Sbjct: 164 TLCAPHEFQCSNRTCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRCGGDGGACIPER 223
Query: 308 WLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD + DC +D++ + S A + C S +CV L CDG D
Sbjct: 224 WVCDRQFDCEDRSDEVAELCGRTGPGATSAPAACAIAAQFAC-RSGECVHLGWRCDGDHD 282
Query: 366 CSNGEDEG-----------------------PFCNNKADCENLKCSHKC--SPTPRGAMC 400
C + DE CN + DC + C T G
Sbjct: 283 CKDKSDEADCPLGTCRGDEFQCGDGTCVSAIKLCNQEQDCPDGSDEAGCLQESTCEGPRR 342
Query: 401 F-CPAGQNPNKTQCVDA-----------------DECLI-DGSCDQTCTNTHLSYVCSCT 441
F C +G+ + + DA +ECL +G C CT+ + + C+C
Sbjct: 343 FQCKSGECVDGGKVCDAQRDCRDWSDEPLKESGLNECLHNNGGCSHICTDLKIGFECTCP 402
Query: 442 EGYTLRPDGKSCTAVN 457
GY L D K+C ++
Sbjct: 403 AGYRLL-DQKTCGDID 417
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 180 ALSKFCDGKPDC-SNGEDEGPFCNA----ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
AL FC KP PF + EC QF C +CIP W+CD DC D
Sbjct: 16 ALLLFCHEKPSVWPRIRLTPPFPRSGPVKECDEDQFRCRNERCIPSVWRCDEDDDC-SDN 74
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE + C + C + CIP W CD E +CS D D ++ K C +
Sbjct: 75 SDEDDCPKKTCMDSDFTCD-NGHCIPERWKCDGEEECS--DGSDESEAACTK-QVCPAEK 130
Query: 295 VQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
+ C S KC+P +W CD E DC + DE + A LC P+E +C S+ C
Sbjct: 131 LSCGPTSHKCVPASWRCDGEKDCES-----GADE------AGCATLCAPHEFQC-SNRTC 178
Query: 354 VA 355
+A
Sbjct: 179 LA 180
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 603 KIEKSGLNGMDRQILVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFSGGNRKML 660
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 53/111 (47%), Gaps = 17/111 (15%)
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
+C Q +C +++CIP W CDE+ DCS DN+DED C ++ C
Sbjct: 45 ECDEDQFRCR-NERCIPSVWRCDEDDDCS-----DNSDED-----DCPKKTCMDSDFTC- 92
Query: 349 SSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +CS+G DE K C E L C SHKC P
Sbjct: 93 DNGHCIPERWKCDGEEECSDGSDESEAACTKQVCPAEKLSCGPTSHKCVPA 143
>gi|241097346|ref|XP_002409615.1| low-density lipoprotein receptor, putative [Ixodes scapularis]
gi|215492792|gb|EEC02433.1| low-density lipoprotein receptor, putative [Ixodes scapularis]
Length = 1500
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/204 (35%), Positives = 101/204 (49%), Gaps = 19/204 (9%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
QC+ L+ CDG+ DC +G DE ++C QF+C G+CIP WKCD DC D S
Sbjct: 411 GQCIPLTWKCDGEKDCVDGSDESLCGQSKCPASQFACANGQCIPSPWKCDTEDDC-GDNS 469
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDE-----DWDKFHQ 289
DE N C + C + +CI + CD E DC D V+ T E +
Sbjct: 470 DESNCTFATCAPEEFGCR-NGRCIRRSLACDMEDDCGDASDEVNCTSESSSLGSMPRLFC 528
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + +C+ ++C+P +W CD E DC D +DE + +A C P +LRC
Sbjct: 529 CRPTEFKCSDQRRCLPASWRCDGESDCQ-----DGSDEA-----ACSATTCAPWQLRC-P 577
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
S +C+ S CDG DC +G DE
Sbjct: 578 SGRCIFPSWRCDGDRDCPDGSDEA 601
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 150/367 (40%), Gaps = 70/367 (19%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVLCH--- 166
A + G +R ++ P+ +++ +D +Y D+H + + + DGS VL
Sbjct: 265 AALDGTDRRSVLRGEAVLPNPVLVAVYKDWMYVADAHRKQLLMASKQDGSGLEVLGRDLA 324
Query: 167 -PNELRC-GSSNQCVALSKFCDGKPDCSN-------------------------GE---- 195
+ L+ G S+Q S C G P+CS+ GE
Sbjct: 325 DISALKVYGPSSQ--QGSNGCSGAPNCSHFCFAVPGGGHTCLCPAGFQVQKVGVGERCLC 382
Query: 196 DEGPFCNAE---------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
D G A+ C+ QF C G+CIP +WKCDG DC+ DGSDE +C
Sbjct: 383 DRGEMLLADGTCGPARSTCSSRQFQCLKGQCIPLTWKCDGEKDCV-DGSDESLCGQSKCP 441
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
Q CA + +CIP W CD E DC DN+DE F C + C + +CI
Sbjct: 442 ASQFACA-NGQCIPSPWKCDTEDDCG-----DNSDESNCTFATCAPEEFGCR-NGRCIRR 494
Query: 307 NWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ CD E DC D V+ T E C P E +C +C+ S CDG+ D
Sbjct: 495 SLACDMEDDCGDASDEVNCTSESSSLGSMPRLFCCRPTEFKCSDQRRCLPASWRCDGESD 554
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSC 425
C +G DE A C C+ CP+G+ + D D DGS
Sbjct: 555 CQDGSDE-------AACSATTCAPW--------QLRCPSGRCIFPSWRCDGDRDCPDGSD 599
Query: 426 DQTCTNT 432
+ CT T
Sbjct: 600 EANCTAT 606
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 111/298 (37%), Gaps = 87/298 (29%)
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
T ES + C P E +C +C+ S CDG+ DC +G DE C P Q
Sbjct: 514 TSESSSLGSMPRLFCCRPTEFKCSDQRRCLPASWRCDGESDCQDGSDEAACSATTCAPWQ 573
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPN------------------TCIHQCFNGQVQ 251
C G+CI SW+CDG DC DGSDE N T H C + Q
Sbjct: 574 LRCPSGRCIFPSWRCDGDRDC-PDGSDEANCTATSTPGAPSSSSSTPPTSPHACGAERFQ 632
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG-------QVQCAL----- 299
C CI W CD DC +D +DE QC G V A
Sbjct: 633 CG-DGACILAGWQCDGVPDC-----LDGSDE-----AQCGPGTSSPGTTAVSTAAPASCG 681
Query: 300 -------SKKCIPHNWLCDEEMDCSTD--------------------------------- 319
S KCI ++W+CD DCS
Sbjct: 682 PERFTCDSGKCIWNSWVCDGTHDCSQGEDERLCPGKWPFCTWDLGRLACAGCVPLADVCN 741
Query: 320 ---DIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D D +DE W +H+ C +E RC +N+C+ S+ CDG DC++ DE
Sbjct: 742 SHPDCADGSDE-WGCDQNHDPWKQCSQDEFRCRGNNRCIPASRRCDGIGDCADSSDEA 798
>gi|119588380|gb|EAW67974.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Homo sapiens]
gi|119588381|gb|EAW67975.1| low density lipoprotein receptor-related protein 4, isoform CRA_a
[Homo sapiens]
Length = 1678
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/283 (32%), Positives = 124/283 (43%), Gaps = 68/283 (24%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C+ +F C G CI E W CDG DC +DGSDE N C Q +C S +C+ +W
Sbjct: 3 KCSDKEFRCSDGSCIAEHWYCDGDTDC-KDGSDEENCPTSMCTAEQFRCH-SGRCVRLSW 60
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSK------KCIPHNWLCDEEMDC 316
CD E DC+ DN+DE+ C N G QCAL + +CI LC+ DC
Sbjct: 61 RCDGEDDCA-----DNSDEE-----NCENTGSPQCALDQFLCWNGRCIGQRKLCNGVNDC 110
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE + C P R G N C
Sbjct: 111 G-----DNSDESPQQN-------CRP---RTGEEN------------------------C 131
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHL 434
N N C+ KC C C G + C D +EC +G C Q CTN+
Sbjct: 132 N----VNNGGCAQKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEG 187
Query: 435 SYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
++ C C GY LRPD +SC A+ EP ++F++ +DIR++
Sbjct: 188 AFQCWCETGYELRPDRRSCKALG---PEPV-LLFANRIDIRQV 226
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 62/125 (49%), Gaps = 19/125 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E RC S C+A +CDG DC +G DE + CT QF C G+C+ SW+C
Sbjct: 4 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPTSMCTAEQFRCHSGRCVRLSWRC 62
Query: 225 DGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSK------KCIPHNWLCDEEMDCSTDDIV 277
DG DC D SDE N C N G QCAL + +CI LC+ DC
Sbjct: 63 DGEDDC-ADNSDEEN-----CENTGSPQCALDQFLCWNGRCIGQRKLCNGVNDCG----- 111
Query: 278 DNTDE 282
DN+DE
Sbjct: 112 DNSDE 116
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 656 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVLI 714
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1193 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1249
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1250 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1309
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1310 DRIESADLNGKLRQVLVGHVSHPFAL 1335
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 962 NAKLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTL 1021
Query: 165 CHP 167
P
Sbjct: 1022 VSP 1024
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 263 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 322
Query: 166 HPN 168
N
Sbjct: 323 WQN 325
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 351 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI 409
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL +
Sbjct: 1182 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN 1240
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 570 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 629
Query: 168 N 168
N
Sbjct: 630 N 630
>gi|1083645|pir||S53457 dominant autoantigen gp 330 - rat (fragment)
gi|998942|gb|AAB33315.1| Heymann nephritis autoantigen gp330 {C-terminal} [rats, kidney,
Peptide Partial, 1650 aa]
Length = 1650
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 760 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 818
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 819 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 871
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 872 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 928
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 929 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 986
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 987 GFICSCRPGFKPSTSDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 1046
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 1047 RCAA----DGSPPLLLLPENVRIRK 1067
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 508 MCSSQQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 567
Query: 223 KCDGFVDCLEDGSDEPNT------CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
C+ DC DGSDE H+C + + QCA +K+CIP +W CD S +D
Sbjct: 568 LCNARQDCA-DGSDEDRVLCEHHRVSHECESNEWQCA-NKRCIPQSWQCD-----SVNDC 620
Query: 277 VDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
+DN+DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 621 LDNSDEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTT 674
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC DE
Sbjct: 675 AAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRENSDE 712
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 595 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 653
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 654 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRENSDE 712
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 713 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 771
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 772 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 820
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 821 RADCLDASDE 830
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 106/231 (45%), Gaps = 22/231 (9%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+C+ ++ CD DC D +DE + C Q C + +CIP ++CDE+ DC
Sbjct: 1 RCVRQSFRCDRRNDCG-----DYSDERGCSYPPCHANQFTCQ-NGRCIPRFFVCDEDNDC 54
Query: 317 STDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GP 374
D +DE ++ H C ++ RC + C+ + + C+ DCS+ DE G
Sbjct: 55 G-----DGSDEQ--EHLCHTPEPTCPLHQFRC-DNGHCIEMGRVCNHVDDCSDNSDEKGC 106
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTN 431
N D +C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 107 GINECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCEN 166
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 167 VVGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 214
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 109/222 (49%), Gaps = 31/222 (13%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF------CNAECTPGQFSCGMGKC 217
C + +C N C + C+ + DC++G DE + EC ++ C +C
Sbjct: 549 FCRLGQFQCRDGN-CTSPQALCNARQDCADGSDEDRVLCEHHRVSHECESNEWQCANKRC 607
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
IP+SW+CD DCL++ ++ + C + C GQ +C + +CIP +W CD + DC
Sbjct: 608 IPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG---- 662
Query: 277 VDNTDEDWDK----FHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D+ + C N + C + +CIP +C+ DD +N+DE
Sbjct: 663 -DYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCN-----GFDDCRENSDEQ--- 713
Query: 332 YFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+V CHP+ + RC +++ C+ L CDG DC + DE
Sbjct: 714 --GCESVPCHPSGDFRC-ANHHCIPLRWKCDGTDDCGDNSDE 752
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 10/103 (9%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDE-----RLEKAGMHGENRSPLV 122
I + S R+ A ++ +W L P + LD+ ++E A M+GE+RS LV
Sbjct: 1157 IYWSDAKSQRIEVATLDGRYRNWLITTQLDQPRSYVLDDQGKQPKIESAWMNGEHRSVLV 1216
Query: 123 TKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 1217 SENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 1259
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 129/352 (36%), Gaps = 114/352 (32%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 343 IGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 402
Query: 142 ---------------YWCDSHLNTVESV-RVDGSHNAVLCH----PNELRCGSSNQCVAL 181
+W D + TVE + DGS VL + P ++ + +
Sbjct: 403 SLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVYHPYRQPIM 462
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
S C G + G C+ C G P+ ++ D C
Sbjct: 463 SNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTVQLRD--------RTLC 505
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS----------------------------- 272
+ C + Q C ++KCIP W CD + DCS
Sbjct: 506 MPMCSSQQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSP 565
Query: 273 ------TDDIVDNTDEDW------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
D D +DED H+C + + QCA +K+CIP +W CD S +D
Sbjct: 566 QALCNARQDCADGSDEDRVLCEHHRVSHECESNEWQCA-NKRCIPQSWQCD-----SVND 619
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DN+DED S C P + +C ++ +C+ S CD DC + DE
Sbjct: 620 CLDNSDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 667
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 15/125 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV S CD + DC + DE C QF+C G+CIP + CD DC DGSD
Sbjct: 1 RCVRQSFRCDRRNDCGDYSDERGCSYPPCHANQFTCQNGRCIPRFFVCDEDNDC-GDGSD 59
Query: 237 EPNTCIHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
E H C + C L + CI +C+ DCS DN+DE ++C
Sbjct: 60 EQE---HLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCS-----DNSDEKGCGINEC 111
Query: 291 FNGQV 295
+ +
Sbjct: 112 LDSSI 116
>gi|148698822|gb|EDL30769.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Mus musculus]
Length = 1016
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 152/402 (37%), Gaps = 119/402 (29%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG--KCIPESWKCDGFVDCL 231
C+ CDG+ +C +G DE + EC + SCG KC+P SW+CDG DC
Sbjct: 110 GHCIPERWKCDGEEECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC- 168
Query: 232 EDGSDE---PNTCI---HQCFNG--------------------------------QVQCA 253
E G+DE P C QC N + +C
Sbjct: 169 EGGADEAGCPTLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCG 228
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG------------QVQCALSK 301
CIP W+CD + DC D +DE + + G Q C S
Sbjct: 229 GGGTCIPERWVCDRQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTAQFTCR-SG 282
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI W CD + DC D +DE + C NE +CG CV K C+
Sbjct: 283 ECIHLGWRCDGDRDCK-----DKSDE-----ADCSPGPCRENEFQCGDGT-CVLAIKRCN 331
Query: 362 GKPDCSNGEDE-------------------------GPFCNNKADCE------------- 383
+ DC +G DE G C+++ DC
Sbjct: 332 QERDCPDGSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLN 391
Query: 384 -----NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N +
Sbjct: 392 ECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFK 451
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 452 CECHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 490
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 141/382 (36%), Gaps = 86/382 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 61 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 119
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 120 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 178
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 179 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 238
Query: 309 LCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC +D+ + + A + C S +C+ L CDG DC
Sbjct: 239 VCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTC-RSGECIHLGWRCDGDRDC 297
Query: 367 SNGEDE-----GPFCNNKADCENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE GP N+ C + C C A C + + P +
Sbjct: 298 KDKSDEADCSPGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRF 357
Query: 412 QCVDAD----------------------------ECLI-DGSCDQTCTNTHLSYVCSCTE 442
QC + ECL +G C CT+ + + C+C
Sbjct: 358 QCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPA 417
Query: 443 GYTLRPDGKSCTAVNVPQDEPA 464
G+ L D K+C ++ QD A
Sbjct: 418 GFQLL-DQKTCGDIDECQDPDA 438
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+GP EC QF C +CIP W+CD DC D SDE + C + C +
Sbjct: 55 QGPV--KECEEDQFRCRNERCIPLVWRCDEDNDC-SDNSDEDDCPKRTCADSDFTCD-NG 110
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCA-LSKKCIPHNWLCDEE 313
CIP W CD E +C D +DE +C ++ C S KC+P +W CD E
Sbjct: 111 HCIPERWKCDGEEECP-----DGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGE 165
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
DC DE + LC P+E +C S+ C+A
Sbjct: 166 KDCE-----GGADE------AGCPTLCAPHEFQC-SNRSCLA 195
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 614 FQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 673
Query: 164 L 164
L
Sbjct: 674 L 674
>gi|391345855|ref|XP_003747198.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Metaseiulus occidentalis]
Length = 1692
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 101/337 (29%), Positives = 137/337 (40%), Gaps = 59/337 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C C++ K C+G PDC +G+DE C G+F CG KCIPE W C
Sbjct: 922 CTASQFKC-EDGTCLSPVKRCNGIPDCFHGDDERSCPKVVCKKGEFDCGNDKCIPEEWVC 980
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLC-------DEEMDC-STDDI 276
D DC + DE N + G++Q + C PH C E+ C ++
Sbjct: 981 DLTPDCPQ-AEDETNCPALRAKIGKLQ---NPACDPHYEFCCKSGEKLPLELRCNGIEEC 1036
Query: 277 VDNTDEDW------------------------DKFHQCFNGQ--------------VQCA 298
+D +DE D QC NG +C
Sbjct: 1037 LDRSDELGCPSMCNPPRFRCNSGACLGEDQVCDGIAQCPNGADEHNCQGKCDSKGLHECR 1096
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALS 357
CIP LCD DCS D D ++D K A C +E +C +C+ LS
Sbjct: 1097 ADGTCIPLAKLCDGTRDCS--DGSDELNDDCPKTQPPPANPPCFVDEFQC-DDGKCIPLS 1153
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVD 415
+ CD K C +G DE C + ++C CSH C CFCP G + C D
Sbjct: 1154 QVCDKKRHCDDGSDEDVLCKD-SECGEAGCSHDCVAQGDSITCFCPPGYRLMEDGRTCDD 1212
Query: 416 ADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGK 451
+EC+ C Q C N SY CSC EG+ G+
Sbjct: 1213 VNECIETPEVCSQFCENLKGSYECSCVEGFLKNSRGE 1249
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 120/289 (41%), Gaps = 66/289 (22%)
Query: 170 LRCGSSNQC-----VALSKFCDGKPDCSNGEDEGPFCNAEC---TPGQFSCGMG-KCIPE 220
LR +S C + L CDG+ DC + DE C +FSC G +C+
Sbjct: 31 LRFANSFHCDEARTLELEARCDGEVDCDDRTDEMSCEYDPCNLPRSKKFSCRTGGQCVLR 90
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+KCDG DC DGSDE N T C GQ CA +C+ +++CD DC D
Sbjct: 91 DFKCDGRKDC-TDGSDESNCTKAESCLPGQFACADGSRCLAKSFVCDGVYDCE-----DK 144
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ + + +G + C +C +LC E+ DKY
Sbjct: 145 SDENPRECNATISGFINCLYRFRC--SMYLCLED----------------DKY------- 179
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNNKADCENLKCSHKCSPTPRGA 398
CDG C +G DE C ADC+N C+ +C+ GA
Sbjct: 180 -------------------LCDGIKHCPDGRDESDEGCLKHADCKN--CTQRCTRHSHGA 218
Query: 399 MCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
C C G + + CVD DEC + G C Q C N S+ C C G+T
Sbjct: 219 SCGCNQGFSLADDGVTCVDIDECAL-GLCSQLCKNKEGSFECGCRPGFT 266
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 93/219 (42%), Gaps = 11/219 (5%)
Query: 156 VDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-G 213
DG + C + LRC S++ C+ + CDG DCS+G DE C + G F C
Sbjct: 833 ADGKSCSKSCGAHMLRCSSADGMCIHEKRRCDGSRDCSDGSDE-LNCESHHCGGNFKCVS 891
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
G+CI + +KCDG DC DGSDE C Q +C C+ C+ DC
Sbjct: 892 DGRCILKKFKCDGMKDC-HDGSDEAGCPARNCTASQFKCE-DGTCLSPVKRCNGIPDCFH 949
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D DE C G+ C + KCIP W+CD DC + N K
Sbjct: 950 GD-----DERSCPKVVCKKGEFDCG-NDKCIPEEWVCDLTPDCPQAEDETNCPALRAKIG 1003
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P+ C S + + L C+G +C + DE
Sbjct: 1004 KLQNPACDPHYEFCCKSGEKLPLELRCNGIEECLDRSDE 1042
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 85/203 (41%), Gaps = 24/203 (11%)
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
CD E+DC DD D ++D + + + C +C+ ++ CD DC+ D
Sbjct: 51 CDGEVDC--DDRTDEMSCEYDPCNLPRSKKFSCRTGGQCVLRDFKCDGRKDCT-----DG 103
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNNKAD-- 381
+DE A C P + C ++C+A S CDG DC + DE P CN
Sbjct: 104 SDESN----CTKAESCLPGQFACADGSRCLAKSFVCDGVYDCEDKSDENPRECNATISGF 159
Query: 382 ---CENLKCSHKCSPTPRGAMC----FCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHL 434
+CS +C CP G++ + C+ +C +C Q CT
Sbjct: 160 INCLYRFRCSMYLCLEDDKYLCDGIKHCPDGRDESDEGCLKHADC---KNCTQRCTRHSH 216
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
C C +G++L DG +C ++
Sbjct: 217 GASCGCNQGFSLADDGVTCVDID 239
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNAECTP-----GQFSCGMGKCI 218
C P + C ++C+A S CDG DC + DE P CNA + +F C M C+
Sbjct: 115 CLPGQFACADGSRCLAKSFVCDGVYDCEDKSDENPRECNATISGFINCLYRFRCSMYLCL 174
Query: 219 P-ESWKCDGFVDCLEDGSDE 237
+ + CDG C DG DE
Sbjct: 175 EDDKYLCDGIKHC-PDGRDE 193
>gi|341881854|gb|EGT37789.1| hypothetical protein CAEBREN_22257 [Caenorhabditis brenneri]
Length = 448
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 134/304 (44%), Gaps = 41/304 (13%)
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ 249
DC NG DE +C GQ C G+C+P ++KCDG DC D SDE + G
Sbjct: 3 DCRNGADEADCEPNDCPDGQMLCDSGECMPAAYKCDGHDDC-HDKSDEK-------YCGH 54
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
+ +LS+ + + D N + +DK + C G C + CIP+
Sbjct: 55 ISFSLSE---------NSSFNFGDPDYYKN-EGGYDK-NGCLPGFGMCGTPQVCIPNRSF 103
Query: 310 CDEEMDCSTDDIVDN-------TDEDWDKYFS----HNAVLCHPNELRCGSSNQCVALSK 358
CD DCS N ++DW ++ N C CV +
Sbjct: 104 CDGTQDCSYYLDEKNCTPGGPGGEKDWLSKYTKIPCENMFACKKK--YSFDDQVCVNQEE 161
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416
C+GK C G+DE C ++C +C H+C T GA C C G + + CV+
Sbjct: 162 VCNGKKGCPWGDDESEKC---SECSTKQCEHQCKNTTTGAKCECNKGYRLDSDGVSCVEL 218
Query: 417 DEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC L + +C C NT S+ CSC +GY L+ DGK+C +V + ++ + +I+
Sbjct: 219 DECTLPERACHHFCENTFGSFRCSCAKGYQLKADGKTCELSDVSE---GFLLLTKFDEIQ 275
Query: 476 RIHL 479
R L
Sbjct: 276 RRPL 279
>gi|395840696|ref|XP_003793189.1| PREDICTED: LOW QUALITY PROTEIN: low-density lipoprotein
receptor-related protein 8, partial [Otolemur garnettii]
Length = 942
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 143/362 (39%), Gaps = 79/362 (21%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQ-FSCGMG--KCIPESWKCDGFVDCL 231
C+ CDG+ +CS+G DE C + P + SCG KC+P SW+CDG DC
Sbjct: 76 GHCIPERWKCDGEEECSDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC- 134
Query: 232 EDGSDEPNTCIHQCFNGQVQCAL------------------------------------- 254
E G+DE C C + QC+
Sbjct: 135 EGGADEAG-CATLCAPHEFQCSNRSCLAAVFVCDGDDDCGDGSDERGCADPACGPREFRC 193
Query: 255 ---SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL-----------S 300
+ CIP W+CD + DC D +DE + + G S
Sbjct: 194 GGDAGACIPERWVCDRQFDCE-----DRSDEAAELCGRAGPGATSAPAACAAAAQFACRS 248
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+C+ W CD + DC D +DE CH +E +CG CV K C
Sbjct: 249 GECVHLGWRCDGDRDCK-----DKSDE-----ADCPLGTCHGDEFQCGDGT-CVLAIKRC 297
Query: 361 DGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDAD 417
+ + DC +G DE +C N CSH C+ G C CP G + ++ C D D
Sbjct: 298 NQEQDCPDGSDEAGCLQGLNECLHNNGGCSHICTDLKMGFECTCPTGFRLLDEKTCGDID 357
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
EC +C Q C N + C C GY + K+C AV S+IF++ ++R+I
Sbjct: 358 ECEDPDACSQICVNYKGYFKCECHPGYEMDILTKNCKAV---AGRSPSLIFTNRHEVRKI 414
Query: 478 HL 479
L
Sbjct: 415 DL 416
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + VL
Sbjct: 543 KIEKSGLNGADRQTLVSDNIEWPNGITLDLLTQRLYWVDSKLHQLSSIDFSGGNRKVL 600
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +CV L CDG DC + DE C +F CG G C+ +C+ DC DG
Sbjct: 248 SGECVHLGWRCDGDRDCKDKSDEADCPLGTCHGDEFQCGDGTCVLAIKRCNQEQDC-PDG 306
Query: 235 SDEP------NTCIH 243
SDE N C+H
Sbjct: 307 SDEAGCLQGLNECLH 321
>gi|357625637|gb|EHJ76019.1| vitellogenin receptor [Danaus plexippus]
Length = 1787
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/286 (31%), Positives = 125/286 (43%), Gaps = 34/286 (11%)
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI------HQC-FNGQVQCALSKKCIP 260
G FSC G CIP CDG+ DC EDG DE N C H C Q C C+P
Sbjct: 33 GSFSCTSGACIPSEKYCDGYNDC-EDGGDE-NFCANHRPDAHLCNETHQFLCTDGLMCLP 90
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQ---VQCALSKKCIPHNWLCDEEMDC 316
+W+C+ E DC D +DE +K Q N QC K CI W+CD DC
Sbjct: 91 SSWVCNYENDCK-----DGSDEMGCEKIIQHDNSSCKGFQCDGGKLCISDLWMCDGYYDC 145
Query: 317 ---STDDIVDNTDEDWDKYFSHNAVLCHPNELR--CGSSNQCVALSKFCDGKPDCSNGED 371
+ +D+VD H+ + C + C + C+ + CDG DC +G D
Sbjct: 146 ADKTDEDVVDTCHHAPRPKHLHDTLNCEVRSMNYTCLDKSYCIPYNNMCDGLKDCRDGSD 205
Query: 372 EGPFCNNKAD-CENLKCSHK--CSPTPRGAMCFCPAGQ--NPNKTQCVDADECLID-GSC 425
EG FC + C N C + C PT G C C + + NP+ +C + +CL + C
Sbjct: 206 EGAFCAEWSKMCANRTCPRESFCKPTRNGGTCVCNSYKEYNPSSGECERSRQCLQEVPVC 265
Query: 426 DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
C + + C+C +GY C A P +++F ST
Sbjct: 266 SHMCEDMGDYFKCTCEDGYRSDHAQYLCFAPG-----PEAMLFFST 306
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 96/398 (24%), Positives = 139/398 (34%), Gaps = 112/398 (28%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAEC 205
+ E R + + + C +E RC ++ C+ + CDG DC + DE P +C
Sbjct: 987 IQRTEICRNNTTKQLLTCGSSEFRCSDNSICIERALACDGHADCRDASDEHPDACDTRDC 1046
Query: 206 TPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLC 265
++ C G CIP +WKCD DCL DGSDE + C +G +C C+ C
Sbjct: 1047 GEFEYMCASGSCIPLTWKCDKHEDCL-DGSDEISCESRSCPSGTFEC--DTGCVEVYKRC 1103
Query: 266 DEEMDCSTDDIVDNTDE----DWDKFHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDD 320
D + DC + + DE F C + +C +K C+P E S +
Sbjct: 1104 DGKYDCEDHEDERDCDEPEFAGVIDFSSCAPWEYRCEHNKSICLPQT---ARERSFSVEM 1160
Query: 321 IVDNTDEDWDKYFSHNAVLCHP-----------NELRCGSSNQC---------------- 353
V D ++ H P RC C
Sbjct: 1161 SVLRA-LDRGPFYLHLGNKSQPLLKLLSLQRDGPGARCNGRTDCPGGSDEAGCNFQCGEL 1219
Query: 354 ---------VALSKFCDGKPDCSNGEDEG------------------------------- 373
V + CDG+ DC++G DE
Sbjct: 1220 FPCTQEHWCVYRDQLCDGRQDCADGSDETFDVCARANKTRPLTQTPPTPCEDYRCDDGQC 1279
Query: 374 ----PFCNNKADC-----ENLKCSHKCSP------TPRGAMCFCPAGQNPNKTQCVDADE 418
C++K C EN C+ C+ TPRG C C K+ C +
Sbjct: 1280 LPWEHVCDDKTHCRDGSDENGLCNSTCAAGCISRRTPRGPRCSC-------KSVCEE--- 1329
Query: 419 CLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C TC + VC+C +GY LR D +SC A+
Sbjct: 1330 ------CSHTCHTDGETSVCACYKGYGLRLDRRSCKAL 1361
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 88/221 (39%), Gaps = 37/221 (16%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCG 213
+ C +E C SNQC SK CDG DC GEDE G + C + C
Sbjct: 924 YEVTKCKEHEFYCHKSNQCFDGSKKCDGTEDCKFGEDEEGCLIKGTYYLKICEDDEIDC- 982
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
G CI + C + + C + + +C+ + CI CD DC
Sbjct: 983 HGICIQRTEIC----------RNNTTKQLLTCGSSEFRCSDNSICIERALACDGHADCR- 1031
Query: 274 DDIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + CA S CIP W CD+ DC +D +DE
Sbjct: 1032 ----DASDEHPDACDTRDCGEFEYMCA-SGSCIPLTWKCDKHEDC-----LDGSDE---- 1077
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S + C C + CV + K CDGK DC + EDE
Sbjct: 1078 -ISCESRSCPSGTFECDTG--CVEVYKRCDGKYDCEDHEDE 1115
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 68/155 (43%), Gaps = 36/155 (23%)
Query: 161 NAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNAECTPGQFSCG 213
+A LC+ ++ C C+ S C+ + DC +G DE N+ C F C
Sbjct: 70 DAHLCNETHQFLCTDGLMCLPSSWVCNYENDCKDGSDEMGCEKIIQHDNSSCK--GFQCD 127
Query: 214 MGK-CIPESWKCDGFVDCLEDGSDE--PNTC--------IHQCFNGQVQ-----CALSKK 257
GK CI + W CDG+ DC D +DE +TC +H N +V+ C
Sbjct: 128 GGKLCISDLWMCDGYYDC-ADKTDEDVVDTCHHAPRPKHLHDTLNCEVRSMNYTCLDKSY 186
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDE-----DWDKF 287
CIP+N +CD DC D +DE +W K
Sbjct: 187 CIPYNNMCDGLKDCR-----DGSDEGAFCAEWSKM 216
>gi|189236170|ref|XP_966891.2| PREDICTED: similar to vacuolar sorting protein (vps) [Tribolium
castaneum]
Length = 2106
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C N C + CV CDG+ DC + DE C P F CG GKC+P+ WKC
Sbjct: 1068 CSSNHFTC-RNGLCVPKGWKCDGEDDCGDSSDEAHCGMQSCPPNYFVCGDGKCLPQYWKC 1126
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-- 282
D DC DGSDE + C +GQ C + +CI W CD E DC D +DE
Sbjct: 1127 DYDYDC-SDGSDEVDCPKQNCTDGQFTCK-NGRCIAEKWKCDGENDCR-----DGSDELN 1179
Query: 283 -DWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QC + KCIP W CD E DC D +DE + C
Sbjct: 1180 CEPVEPHVCKSEEFQCKVGGVKCIPSTWQCDGEKDCR-----DGSDE-----MNCKNNTC 1229
Query: 341 HPNELRCGS-SNQCVALSKFCDGKPDCSNGEDE 372
+ CG +N+C+ + CDG DC NG DE
Sbjct: 1230 LDIQFSCGEPNNRCIYKTWVCDGDKDCPNGSDE 1262
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 103/219 (47%), Gaps = 33/219 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PN CG +C+ CD DCS+G DE CT GQF+C G+CI E WKC
Sbjct: 1107 CPPNYFVCGDG-KCLPQYWKCDYDYDCSDGSDEVDCPKQNCTDGQFTCKNGRCIAEKWKC 1165
Query: 225 DGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNT 280
DG DC DGSDE N H C + + QC + KCIP W CD E DC D +
Sbjct: 1166 DGENDC-RDGSDELNCEPVEPHVCKSEEFQCKVGGVKCIPSTWQCDGEKDCR-----DGS 1219
Query: 281 DEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDI----VDNTDEDWDKYF 333
DE K + C + Q C + +CI W+CD + DC +D++ + T +DW
Sbjct: 1220 DEMNCKNNTCLDIQFSCGEPNNRCIYKTWVCDGDKDCPNGSDEVNCTTPNGTCQDW---- 1275
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
RC + +C+ CD DC +G DE
Sbjct: 1276 ----------MFRC-QNQRCIPYWWKCDQADDCGDGSDE 1303
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 132/321 (41%), Gaps = 60/321 (18%)
Query: 95 DLPAPEIFPLDER---LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D A I+ +D R + + +HG+ ++++N + ++ +YW D N +
Sbjct: 918 DYIAERIYWVDARQDYIASSDLHGDFLKIIISQNDVVSHPFAVAVFKNTMYWDDWKRNAI 977
Query: 152 ESVRVDGSHNAVL------------CHPNELRCGSSNQCVAL--SKFCDGKPD------C 191
S D H + + + L+ G +N C A S C KP C
Sbjct: 978 FSADKDTYHGVEILQKQLPGLMDLKVYAHGLQVG-TNACTASKCSYICVSKPKKNSSCLC 1036
Query: 192 SNGEDEG-----------PFCNAECTPGQ-------FSCGMGKCIPESWKCDGFVDCLED 233
+G + P N C P Q F+C G C+P+ WKCDG DC D
Sbjct: 1037 PDGMEYNNGRCLCPGHVPPLANFTCPPVQNTCSSNHFTCRNGLCVPKGWKCDGEDDC-GD 1095
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE + + C C KC+P W CD + DCS D +DE C +G
Sbjct: 1096 SSDEAHCGMQSCPPNYFVCG-DGKCLPQYWKCDYDYDCS-----DGSDEVDCPKQNCTDG 1149
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSN- 351
Q C + +CI W CD E DC D +DE + + H +C E +C
Sbjct: 1150 QFTCK-NGRCIAEKWKCDGENDCR-----DGSDELNCEPVEPH---VCKSEEFQCKVGGV 1200
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
+C+ + CDG+ DC +G DE
Sbjct: 1201 KCIPSTWQCDGEKDCRDGSDE 1221
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 164 LCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM--GKCIPE 220
+C E +C +C+ + CDG+ DC +G DE N C QFSCG +CI +
Sbjct: 1187 VCKSEEFQCKVGGVKCIPSTWQCDGEKDCRDGSDEMNCKNNTCLDIQFSCGEPNNRCIYK 1246
Query: 221 SWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+W CDG DC +GSDE N T C + +C +++CIP+ W CD+ DC D
Sbjct: 1247 TWVCDGDKDC-PNGSDEVNCTTPNGTCQDWMFRCQ-NQRCIPYWWKCDQADDCG-----D 1299
Query: 279 NTDE--------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
+DE C N Q +C + CI +W+CD DC +
Sbjct: 1300 GSDELGCFPSHAPTPKSTTTPPVTTCGNNQFEC-MGGTCIFSSWVCDGMEDCVGGE---- 1354
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D+ C +E +C C+ L+ C+ +PDC + DE
Sbjct: 1355 -----DERHCEGVRNCTKDEFKCHVDGSCIPLAAVCNRQPDCPDLTDE 1397
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN-------------AECTPGQFSCGMG 215
RC + +C+ CD DC +G DE G F + C QF C G
Sbjct: 1277 FRC-QNQRCIPYWWKCDQADDCGDGSDELGCFPSHAPTPKSTTTPPVTTCGNNQFECMGG 1335
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CI SW CDG DC+ G DE + + C + +C + CIP +C+ + DC
Sbjct: 1336 TCIFSSWVCDGMEDCV-GGEDERHCEGVRNCTKDEFKCHVDGSCIPLAAVCNRQPDCP-- 1392
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSK--------KCIPHNWLCDEEMDC 316
D+ D + D H NG + SK C P LCD +DC
Sbjct: 1393 DLTDESLCD----HNLPNGPATPSCSKGYFPCDGGSCYPLAALCDGRVDC 1438
>gi|291398862|ref|XP_002715661.1| PREDICTED: low density lipoprotein receptor-related protein 8
[Oryctolagus cuniculus]
Length = 1042
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 111/334 (33%), Positives = 152/334 (45%), Gaps = 36/334 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG--KCIP 219
A LC P+E RCG+ + C+A CDG DC +G DE + C P +F CG G CIP
Sbjct: 203 APLCAPHEFRCGNRS-CLAAVFVCDGDDDCGDGSDERGCADPACGPLEFRCGGGGGTCIP 261
Query: 220 ESWKCDGFVDCLEDGSDEP-NTCIHQCFNG---------QVQCA-LSKKCIPHNWLCDEE 268
E W CD +DC EDGSDE + C H VQ A S +C+ W CD +
Sbjct: 262 ERWVCDRQLDC-EDGSDEAADLCGHAGPGATAAPSACAPAVQFACRSGECVHLGWRCDGD 320
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + +C C+ CD+E DC D +DE
Sbjct: 321 HDCK-----DKSDEADCPPGTCRGDEFRCG-DGTCVLATKRCDQEQDCR-----DGSDE- 368
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE--NLK 386
+ P +C +S +CV K CD + DC + DE +C+ N
Sbjct: 369 --AGCLQESTCEGPRSFQC-TSGECVDSGKVCDAQRDCRDWSDELLKECGLNECQHNNGG 425
Query: 387 CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
CSH C+ G C CPAG + ++ C D DEC +C Q C N + C C GY
Sbjct: 426 CSHICTDRRIGFECSCPAGFRLLDQKTCGDIDECEDPDACSQICVNYKGYFKCECHPGYE 485
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C A + S+IF++ ++R+I L
Sbjct: 486 MDTLSKNCKAA---AGKSPSLIFTNRHEVRKIDL 516
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 88/216 (40%), Gaps = 29/216 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C + +C+ CD DCS+ DE C F+C G CIPE WKC
Sbjct: 86 CEEHQFQC-RNGRCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCDNGHCIPERWKC 144
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE C Q C ++ C S KC+P +W CD E DC +
Sbjct: 145 DGEEEC-PDGSDESKAACTKQECPAEKLSCGPTSHKCVPASWRCDGEKDCES-------- 195
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA---V 338
G + + C PH + C C V + D+D
Sbjct: 196 -----------GADEAGCAPLCAPHEFRCGNR-SCLAAVFVCDGDDDCGDGSDERGCADP 243
Query: 339 LCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDEG 373
C P E RC G C+ CD + DC +G DE
Sbjct: 244 ACGPLEFRCGGGGGTCIPERWVCDRQLDCEDGSDEA 279
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 75/166 (45%), Gaps = 23/166 (13%)
Query: 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCA 253
D GP EC QF C G+CIP W+CD DC D SDE + C + C
Sbjct: 77 ARDHGPV--KECEEHQFQCRNGRCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCD 133
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCA-LSKKCIPHNWLC 310
+ CIP W CD E +C D +DE +C ++ C S KC+P +W C
Sbjct: 134 -NGHCIPERWKCDGEEECP-----DGSDESKAACTKQECPAEKLSCGPTSHKCVPASWRC 187
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
D E DC + DE + A LC P+E RCG+ + A+
Sbjct: 188 DGEKDCES-----GADE------AGCAPLCAPHEFRCGNRSCLAAV 222
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + + L S DL P +D
Sbjct: 575 LHSPEGLAVDWVHKHMYWTDSGNKTISVATVDGGRRCTLF-SRDLSEPRAIAVDPLRGFM 633
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+
Sbjct: 634 YWSDWGFQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDFS 693
Query: 158 GSHNAVL 164
G + +L
Sbjct: 694 GGNRKML 700
>gi|321474872|gb|EFX85836.1| hypothetical protein DAPPUDRAFT_237406 [Daphnia pulex]
Length = 1305
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 147/345 (42%), Gaps = 76/345 (22%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQ 209
V +R+ G A +C NE C S +CVA + CD DCS+G DE CN C +P
Sbjct: 10 VFVIRLPG-FVAAVCDGNEFACKSGRECVAAKQHCDHVIDCSDGSDEIE-CNYPCRSPHM 67
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNW 263
C G CI + CD DC D SDE N C + C + CIP NW
Sbjct: 68 KQCKDGHCIAMFFFCDRENDC-GDWSDELNCTGTSSGLTFNCPSNTFHCE-GQVCIPQNW 125
Query: 264 LCDEEMDCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+CD + DCS D++ NT + K QC K+CI + W+CD DC+
Sbjct: 126 VCDGQDDCSDARDELHCNTSMECKKGFQC---------GKECILNQWVCDGVTDCA---- 172
Query: 322 VDNTDEDW---DKYFSHNAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFC 376
D +DE + +HN +L C S + +C+ +S+ CDG DC + DEG C
Sbjct: 173 -DGSDEKECGPGSFMNHNCLLPEHGWFSCLSKGTKKCMPISRACDGYADCDDRADEGGQC 231
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDG-SCDQTCTNTHLS 435
N DEC +D C Q C N
Sbjct: 232 N--------------------------------------IDECSMDPPMCSQKCANNRGG 253
Query: 436 YVCSCTEGYTL-RPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ CSC+ GYT+ + +SC A N P EP ++ ++ DIR L
Sbjct: 254 FECSCSSGYTVGTRNNRSCVA-NGP--EPI-LLITTNRDIRYTSL 294
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL--- 164
+ AGM G R+ ++TK+I WP+ LV+D +YW D+ LN +ES R+DGS +L
Sbjct: 420 IGSAGMDGSQRTNIITKDIIWPNGLVVDETIQRIYWGDAKLNRIESSRIDGSDRKILPVK 479
Query: 165 -CHPNEL 170
HP L
Sbjct: 480 VTHPYAL 486
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 131/347 (37%), Gaps = 80/347 (23%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD------SHLN-----TVE 152
L +E+ ++GENR L + + + +D + D ++W S LN TV
Sbjct: 766 LRGTIERIEVNGENRIILRS---HLGTPVAMDVSADSVFWLTQSSTRISWLNKQDPKTVR 822
Query: 153 SVRVDGSHNAVLCH------------PNELRC-GSSNQCVALSKFCDGKPDCSN------ 193
+D S N + + ++ C G + C S C PD
Sbjct: 823 GFVIDASENMTVQYRLMSVIDLSDFNSHDHHCLGDTGGC---SDICAPTPDGVTCLCPLG 879
Query: 194 ---GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL-----------------ED 233
GED+ A+C ++ CIP ++CDG DC D
Sbjct: 880 KVLGEDKHVCTKADCVGVEWFKCQTSCIPVKYRCDGINDCALGEDELQCRNTTTEVSCND 939
Query: 234 GSDEPN-TCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKFHQC 290
SDE N T H C + Q C+ S CIP +W+CD + DC + D++ ++ D+ C
Sbjct: 940 KSDEANCTSTHSVCSSTQFYCSNSHTCIPLSWVCDRDSDCQHGEDEDSSVCDNVDRKLIC 999
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCS-----------TDDIVDNTDEDWDKYFSHNAVL 339
+ ++C C+P LC+ C D IVD + K +++V
Sbjct: 1000 PDNYLRCPQHSACMPRKTLCNSIAGCEHLTNEELCAKLNDLIVDKMKPEKPK---NSSVS 1056
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK 386
C +C +C + C G C + K+ CE LK
Sbjct: 1057 CPRYFFQCRPDLKCYSRKLVCAGDAACRK-------LSVKSLCERLK 1096
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 29/171 (16%)
Query: 303 CIPHNWLCDEEMDC-----------STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
CIP + CD DC +T ++ N D S ++V C + C +S+
Sbjct: 906 CIPVKYRCDGINDCALGEDELQCRNTTTEVSCNDKSDEANCTSTHSV-CSSTQFYCSNSH 964
Query: 352 QCVALSKFCDGKPDCSNGEDE-GPFCNN---KADCEN--LKCSHKCSPTPRGAMCFCPAG 405
C+ LS CD DC +GEDE C+N K C + L+C + PR +C AG
Sbjct: 965 TCIPLSWVCDRDSDCQHGEDEDSSVCDNVDRKLICPDNYLRCPQHSACMPRKTLCNSIAG 1024
Query: 406 --QNPNKTQCVDADECLIDGSCDQTCTNTHLS---YVCSCTEGYTLRPDGK 451
N+ C ++ ++D + N+ +S Y C RPD K
Sbjct: 1025 CEHLTNEELCAKLNDLIVDKMKPEKPKNSSVSCPRYFFQC------RPDLK 1069
>gi|321459295|gb|EFX70350.1| hypothetical protein DAPPUDRAFT_61405 [Daphnia pulex]
Length = 246
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 108/238 (45%), Gaps = 40/238 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C PNE RC S N C+ CDG+ DCS G+DE F + C +F C +C+P+ W+
Sbjct: 9 CLPNEYRCNSDNTCIPERWVCDGRQDCSLGDDE--FACSRCREEEFRCENENRCLPKRWR 66
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC DGSDE P+T +C +GQ +C CIP +CD C DN+
Sbjct: 67 CDGSRDCA-DGSDERDCPST--QECGDGQFRCGDGLSCIPLRRVCDGSNHCR-----DNS 118
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-----------------TDDIVD 323
DE C +C + CI W+CD +DC +D ++D
Sbjct: 119 DETNCSSIACQIEDFKCNDTGVCISRKWVCDGNVDCKDGSDEAQCAREAELNFESDVLID 178
Query: 324 NTDEDWDKYFSHNAV---------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ + A+ C EL C S + C+ + CDG DC++G DE
Sbjct: 179 EMEDPLAAGGNETAINADTTFNPDKCPLGELLCMSGSTCIRFEQLCDGTRDCADGADE 236
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 74/173 (42%), Gaps = 32/173 (18%)
Query: 215 GKCIPES-------------WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
G+C+P W CDG DC G DE +C + +C +C+P
Sbjct: 7 GECLPNEYRCNSDNTCIPERWVCDGRQDCSL-GDDE--FACSRCREEEFRCENENRCLPK 63
Query: 262 NWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD DC+ D +DE D +C +GQ +C CIP +CD C
Sbjct: 64 RWRCDGSRDCA-----DGSDERDCPSTQECGDGQFRCGDGLSCIPLRRVCDGSNHCR--- 115
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DN+DE + +++ C + +C + C++ CDG DC +G DE
Sbjct: 116 --DNSDE-----TNCSSIACQIEDFKCNDTGVCISRKWVCDGNVDCKDGSDEA 161
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 78/198 (39%), Gaps = 11/198 (5%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+C + +C +C+P W CD DC S + +T E D F R +G + L
Sbjct: 46 RCREEEFRCENENRCLPKRWRCDGSRDCADGSDERDCPSTQECGDGQF-RCGDGLSCIPL 104
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDL-LNSWDLPAPEIFPLDERLEKAGMHGENRS 119
+ C + + C QI D N + + D ++ E +
Sbjct: 105 RRVCDGSNHCRDNSDETNCSSIAC-QIEDFKCNDTGVCISRKWVCDGNVDCKDGSDEAQC 163
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
+ + + S ++ID +D L + ++ D + N C EL C S + C+
Sbjct: 164 AREAE-LNFESDVLIDEMEDPL----AAGGNETAINADTTFNPDKCPLGELLCMSGSTCI 218
Query: 180 ALSKFCDGKPDCSNGEDE 197
+ CDG DC++G DE
Sbjct: 219 RFEQLCDGTRDCADGADE 236
>gi|410968604|ref|XP_003990792.1| PREDICTED: low-density lipoprotein receptor-related protein 1B-like
[Felis catus]
Length = 1105
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 145/373 (38%), Gaps = 95/373 (25%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 38 FWCDGDFDCADGS--DERNCETSCSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEK--- 91
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C
Sbjct: 92 NCEPDSPTCSSSEYICASRGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCRNKA 149
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLC 310
CIP WLCD DC VD +DE C G C + C H W+C
Sbjct: 150 HCIPIRWLCDGIHDC-----VDGSDE-----QNCDRGGNICRADEFLCNNSLCKLHFWVC 199
Query: 311 DEEMDCS--------------------------------------TDDIVDNTDEDW-DK 331
D E DC DD DN+DED
Sbjct: 200 DGEDDCGDNSDEAPDMCAKFLCPPTRPHRCRNNRICLQPEQMCNGIDDCGDNSDEDHCGG 259
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------------FC 376
++ A C +E C ++ +C+ + CD DC +G DE C
Sbjct: 260 KLTYKARPCKKDEFAC-NNKKCIPMDLQCDQLDDCGDGSDEQGCRITPAEYTCEDNVNPC 318
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHL 434
+ A C +K S C C G +N QC D +ECL+ G+C C N
Sbjct: 319 GDDAYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEG 369
Query: 435 SYVCSCTEGYTLR 447
SY C C + + R
Sbjct: 370 SYKCVCDQNFQER 382
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ CV+ +CDG DC++G DE C C+ QF C G+CI WKCDG DC +
Sbjct: 29 ANGDCVSSRFWCDGDFDCADGSDERN-CETSCSKDQFQCSNGQCISAKWKCDGHEDC-KY 86
Query: 234 GSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
G DE N C + + CA S+ CI + C+ E DC+ D +DE D +C
Sbjct: 87 GEDEKNCEPDSPTCSSSEYICA-SRGCISASLKCNGEYDCA-----DGSDE-MDCVTECK 139
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
Q +C CIP WLCD DC VD +DE + +C +E C +S
Sbjct: 140 EDQFRCRNKAHCIPIRWLCDGIHDC-----VDGSDE---QNCDRGGNICRADEFLCNNS- 190
Query: 352 QCVALSKFCDGKPDCSNGEDEGP 374
C CDG+ DC + DE P
Sbjct: 191 LCKLHFWVCDGEDDCGDNSDEAP 213
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 558 IEEAAMDGTLRRILVQKNLQRPTGLAVDHFSERIYWADLELSVIGSVLYDG 608
>gi|350409315|ref|XP_003488691.1| PREDICTED: very low-density lipoprotein receptor-like [Bombus
impatiens]
Length = 892
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 154/377 (40%), Gaps = 89/377 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S +C+ + CD + DCS+G DE N C +F+C +CI +W C
Sbjct: 117 CSETEFEC-SPGRCIPKTWLCDLQHDCSDGLDEKNCRNDTCRSDEFTCANKRCIQRTWVC 175
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKK-CIPHNWLCDEEMDCSTDDIVDNT 280
D DC + +E P TC G + A SK CI W CD + DC D
Sbjct: 176 DSDDDCGDGSDEEDCKPVTC------GPSEFACSKNYCITSRWRCDGDFDCP-----DKI 224
Query: 281 DEDWDKFHQCFNGQVQCALSK----------KCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
DE K+ NG+ +K CI +W+CD E DC + DE
Sbjct: 225 DEVGCKYS---NGERPSHCNKDEDFDCDDDFTCIHKSWVCDGERDCP-----NGADELPT 276
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------------------ 372
+ HN V C P++ +CG C++ +C+GK +C +G DE
Sbjct: 277 R--CHN-VTCRPDQFQCGDHRNCISGHLYCNGKAECVDGSDERNCTGKTTVCDPSTQFEC 333
Query: 373 --------GPFCNNKADC------------------ENLKCSHKCSPTPRGAMCFCPAGQ 406
CN DC N CS C P G C C AG
Sbjct: 334 SEGSCIPLSSVCNKHRDCIGWEDENEELCGVNECSKNNGGCSQICIDLPIGFRCDCNAGY 393
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS-CTAVNVPQDEP 463
N+T C D DECL G+C Q C N S+ CSC GY P + C A +
Sbjct: 394 RLIDNRT-CDDIDECLEPGTCSQFCLNEKSSFKCSCAPGYLKDPRNHTRCKAA----EGH 448
Query: 464 ASIIFSSTVDIRRIHLN 480
AS++F+ DIR++ L+
Sbjct: 449 ASLLFTRRHDIRKVALD 465
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 22/217 (10%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGK 216
S ++ C + +C ++ +C+ CD DC + DE C C +F C K
Sbjct: 29 STDSRPCPLKQFQC-TNGKCIPRPWVCDSMDDCGDNSDETSKCEGPRTCADSEFKCANEK 87
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CIP +W CDG DC + ++P C QC + +C+ +CIP WLCD + DCS
Sbjct: 88 CIPGTWHCDGEDDCHDSSDEDPTVCRSKQCSETEFECS-PGRCIPKTWLCDLQHDCS--- 143
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D DE + C + + CA +K+CI W+CD + DC ++
Sbjct: 144 --DGLDEKNCRNDTCRSDEFTCA-NKRCIQRTWVCDSDDDCGDGSDEEDC---------- 190
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C P+E C S N C+ CDG DC + DE
Sbjct: 191 KPVTCGPSEFAC-SKNYCITSRWRCDGDFDCPDKIDE 226
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-NAV 163
+ R+EKAGM G +R+ +V ++QWP+ L +D +YW D+ LN + S DGS V
Sbjct: 586 EARIEKAGMDGSHRTVIVDNDVQWPNGLTLDLIGKKIYWVDAKLNIIGSCNYDGSGVRTV 645
Query: 164 LCHPNELR 171
L P LR
Sbjct: 646 LYSPEVLR 653
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 8/84 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSCGMG 215
HN V C P++ +CG C++ +C+GK +C +G DE C + T QF C G
Sbjct: 279 HN-VTCRPDQFQCGDHRNCISGHLYCNGKAECVDGSDERN-CTGKTTVCDPSTQFECSEG 336
Query: 216 KCIPESWKCDGFVDCL--EDGSDE 237
CIP S C+ DC+ ED ++E
Sbjct: 337 SCIPLSSVCNKHRDCIGWEDENEE 360
>gi|442621191|ref|NP_001262972.1| lipophorin receptor 1, isoform P [Drosophila melanogaster]
gi|442621193|ref|NP_001262973.1| lipophorin receptor 1, isoform Q [Drosophila melanogaster]
gi|440217905|gb|AGB96352.1| lipophorin receptor 1, isoform P [Drosophila melanogaster]
gi|440217906|gb|AGB96353.1| lipophorin receptor 1, isoform Q [Drosophila melanogaster]
Length = 976
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 116/262 (44%), Gaps = 52/262 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF CG G CIP
Sbjct: 136 CDEKQFQCHSGD-CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN 194
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N C++ C N + +C +CIP +WLCD DC +D+
Sbjct: 195 KWRCDQESDC-ADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAH 253
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCAL------------SKKCIP 305
N D+F C NG + +C + + CI
Sbjct: 254 CNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIA 312
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD + DCS D +DE + C +E +C C+ S CDG D
Sbjct: 313 KRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRD 367
Query: 366 CSNGEDEGPFCNNKADCENLKC 387
C +G+DE + A+C+N+ C
Sbjct: 368 CPDGDDE-----HTANCKNVTC 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 60/218 (27%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 129 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 187
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ CIP+ W CD+E DC+ D +DE + + C N + +C +CIP +WLCD
Sbjct: 188 NGNCIPNKWRCDQESDCA-----DGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGS 242
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG------------------------- 348
DC D +DE +H C +E CG
Sbjct: 243 NDCR-----DKSDE------AHCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKE 291
Query: 349 --------------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+G DE
Sbjct: 292 CPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDE 329
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 695 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 754
Query: 167 PNEL 170
E
Sbjct: 755 SGEY 758
>gi|442621195|ref|NP_001262974.1| lipophorin receptor 1, isoform R [Drosophila melanogaster]
gi|440217907|gb|AGB96354.1| lipophorin receptor 1, isoform R [Drosophila melanogaster]
Length = 868
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 116/262 (44%), Gaps = 52/262 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF CG G CIP
Sbjct: 28 CDEKQFQCHSGD-CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN 86
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIV 277
W+CD DC DGSDE N C++ C N + +C +CIP +WLCD DC +D+
Sbjct: 87 KWRCDQESDC-ADGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGSNDCRDKSDEAH 145
Query: 278 DNTDEDWDKFHQCFNG--------------------QVQCAL------------SKKCIP 305
N D+F C NG + +C + + CI
Sbjct: 146 CNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTCTNGACIA 204
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD + DCS D +DE + C +E +C C+ S CDG D
Sbjct: 205 KRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSWLCDGDRD 259
Query: 366 CSNGEDEGPFCNNKADCENLKC 387
C +G+DE + A+C+N+ C
Sbjct: 260 CPDGDDE-----HTANCKNVTC 276
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 88/218 (40%), Gaps = 60/218 (27%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 21 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 79
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ CIP+ W CD+E DC+ D +DE + + C N + +C +CIP +WLCD
Sbjct: 80 NGNCIPNKWRCDQESDCA-----DGSDEANELCMNACPNNEFKCQTVDQCIPRSWLCDGS 134
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG------------------------- 348
DC D +DE +H C +E CG
Sbjct: 135 NDCR-----DKSDE------AHCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSDEKE 183
Query: 349 --------------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+G DE
Sbjct: 184 CPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDE 221
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 587 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 646
Query: 167 PNEL 170
E
Sbjct: 647 SGEY 650
>gi|315468531|ref|NP_001186820.1| low-density lipoprotein receptor-related protein 8 precursor [Sus
scrofa]
gi|315139193|gb|ADT80789.1| low density lipoprotein receptor-related protein 8 [Sus scrofa]
Length = 957
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 155/415 (37%), Gaps = 89/415 (21%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
HL+ G A C N+ RC + +C+ CD DCS+ DE C
Sbjct: 24 HLSAATDPLRSGQGPAKECEENQFRC-RNERCIPSLWRCDEDDDCSDNSDEDDCPKKTCA 82
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNW 263
F+C G CI WKCDG +C DGSDE TC Q C ++ C S KC+P +W
Sbjct: 83 DSDFTCDNGHCIHARWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASW 141
Query: 264 LCDEEMDCST--DDIVDNTDEDWDKFHQCFNGQVQCAL---------------------- 299
CD E DC + D+ T +F QC N A+
Sbjct: 142 RCDGEKDCESGVDEAGCATLCAPHEF-QCSNRSCLAAVFVCDGDDDCGDGSDERGCADPA 200
Query: 300 -----------SKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
CIP W+CD + DC +D+ + S A +
Sbjct: 201 CGPREFRCGGDGGACIPERWVCDRQFDCEDRSDEAAELCGHAGPGATSAPAACAAAAQFA 260
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKADC- 382
C S +CV L CDG DC + DE G C+ + DC
Sbjct: 261 C-RSGECVHLGWRCDGDRDCKDKSDEADCPLGTCRGDEFQCGDGTCVPAGKRCDQQQDCP 319
Query: 383 -----------------ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGS 424
N CSH C+ G C CPAG ++ C D DEC +
Sbjct: 320 DRSDEAGCLQGLNECLHNNGGCSHICTDLKIGFECTCPAGYRLLDQKTCGDIDECEDPDA 379
Query: 425 CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C Q C N + C C GY + ++C AV S++F++ ++RRI L
Sbjct: 380 CSQICVNYKGYFKCECYPGYEMDALTRNCKAV---VGRSPSLVFTNRHEVRRIDL 431
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ HR+ + +S + + L S DL P +D
Sbjct: 490 LHSPEGLAVDWVHRHIYWTDSGSKTISVATVDGRRRRTLF-SRDLSEPRAIAVDPLRGFM 548
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EK+G++G +R LV +I+WP+ + +D LYW DS L+ + S+
Sbjct: 549 YWSDWGYQAKIEKSGLNGADRQTLVADSIEWPNGITLDLLNQRLYWVDSKLHQLSSIDCS 608
Query: 158 GSHNAVL 164
G + +L
Sbjct: 609 GGNRKML 615
>gi|296040400|dbj|BAJ07612.1| Bm8 interacting protein 2-5, partial [Bombyx mori]
Length = 440
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 168/429 (39%), Gaps = 73/429 (17%)
Query: 2 IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
I C +GQ +C +KCIP W CD E DC D +DE + G+
Sbjct: 29 IVNCTDGQHRCNGRDEKCIPWFWKCDGEKDCK-----DGSDEPDTCPVRHCRAGSFQCKN 83
Query: 61 EFNHRNQSLCFIQ------------QQNVSSVRLRCAQIND-LLNSWDLPAPEIFPLDER 107
++C N S+ +C +L+SW +
Sbjct: 84 TNCTPAATICDGTDDCGDGSDEAECAHNCPSLEFKCKHSGRCILDSWKCDGDTDCKDNSD 143
Query: 108 LEKAGMHGENRSP---LVTKNIQ-WPSSLVIDYNQDI-------LYWCDSHLNTVESVRV 156
+ A H +P KN + P + D++ D Y C T R
Sbjct: 144 EDPAMCHNRTCNPDTEFSCKNGRCIPKLWMCDFDNDCGDDSDEPAYMCRQKNCTTGWRRC 203
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSC 212
G N +C+ FCDGK DC +G DE P C AE F+C
Sbjct: 204 PGQSNY--------------RCIPKWLFCDGKDDCRDGSDELAENCPTCAAE---TDFTC 246
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEE 268
+CIP+ W CD F D DGSDE +C + +C S KCI W CD E
Sbjct: 247 DNKRCIPKQWLCD-FTDDCGDGSDETEALCQSKYRECSESEFKCG-SGKCISSRWRCDHE 304
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE QC NG QC S CI ++ CD + DC D +DE
Sbjct: 305 DDCG-----DNSDETDCGGFQCKNGTFQC-RSGHCIAAHFRCDGDRDCR-----DLSDEI 353
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC- 387
C N+ +CG++ CV+ S CDG DC +G DE P N +C+ L+
Sbjct: 354 GCPPKFPGGRYCPENKFQCGNT-LCVSQSDLCDGTDDCGDGSDETPDICNNFNCDTLRRF 412
Query: 388 ---SHKCSP 393
+H+C P
Sbjct: 413 HCDNHRCVP 421
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 87/178 (48%), Gaps = 19/178 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKK 257
C CT GQ C KCIP WKCDG DC +DGSDEP+TC + C G QC +
Sbjct: 28 CIVNCTDGQHRCNGRDEKCIPWFWKCDGEKDC-KDGSDEPDTCPVRHCRAGSFQCK-NTN 85
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD TDD D +DE + H C + + +C S +CI +W CD + DC
Sbjct: 86 CTPAATICD-----GTDDCGDGSDE-AECAHNCPSLEFKCKHSGRCILDSWKCDGDTDCK 139
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
DN+DE D HN C+P+ + +C+ CD DC + DE +
Sbjct: 140 -----DNSDE--DPAMCHNRT-CNPDTEFSCKNGRCIPKLWMCDFDNDCGDDSDEPAY 189
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 138/356 (38%), Gaps = 50/356 (14%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALE 61
H C + + +C S +CI +W CD + DC DN+DED R N E
Sbjct: 109 AHNCPSLEFKCKHSGRCILDSWKCDGDTDCK-----DNSDEDPAMCHNRTCN----PDTE 159
Query: 62 FNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
F+ +N + + + C ND + D PA +K G R P
Sbjct: 160 FSCKNGRC-------IPKLWM-CDFDNDCGDDSDEPAYMC------RQKNCTTGWRRCPG 205
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVAL 181
+ P L D D D E+ + C + +C+
Sbjct: 206 QSNYRCIPKWLFCDGKDDCR---DGSDELAENCPTCAAETDFTC--------DNKRCIPK 254
Query: 182 SKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
CD DC +G DE C + EC+ +F CG GKCI W+CD DC D SDE
Sbjct: 255 QWLCDFTDDCGDGSDETEALCQSKYRECSESEFKCGSGKCISSRWRCDHEDDC-GDNSDE 313
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD--EDWDKFHQCFNGQV 295
+ QC NG QC S CI ++ CD + DC D+ D + C +
Sbjct: 314 TDCGGFQCKNGTFQC-RSGHCIAAHFRCDGDRDCR--DLSDEIGCPPKFPGGRYCPENKF 370
Query: 296 QCALSKKCIPHNWLCDEEMDCS-----TDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
QC + C+ + LCD DC T DI +N + D + F + C P LR
Sbjct: 371 QCG-NTLCVSQSDLCDGTDDCGDGSDETPDICNNFNCDTLRRFHCDNHRCVPRYLR 425
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 240 TCIHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQC 297
TCI C +GQ +C +KCIP W CD E DC D +DE D C G QC
Sbjct: 27 TCIVNCTDGQHRCNGRDEKCIPWFWKCDGEKDCK-----DGSDEPDTCPVRHCRAGSFQC 81
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD TDD D +DE +HN C E +C S +C+ S
Sbjct: 82 K-NTNCTPAATICD-----GTDDCGDGSDE---AECAHN---CPSLEFKCKHSGRCILDS 129
Query: 358 KFCDGKPDCSNGEDEGP-FCNNKA 380
CDG DC + DE P C+N+
Sbjct: 130 WKCDGDTDCKDNSDEDPAMCHNRT 153
>gi|334321482|ref|XP_003340113.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Monodelphis domestica]
Length = 1162
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 152/412 (36%), Gaps = 88/412 (21%)
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
T S RV G+ A C N+ +CG+ +C+ CD DC + DE C+
Sbjct: 294 TPPSPRVSGA--AKECEENQFQCGN-ERCIPSVWRCDEDNDCVDNSDEDDCPKKTCSDSD 350
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC---------IHQCFNGQVQC-------- 252
F+C G CIPE WKCDG +C DGSDE T + GQ C
Sbjct: 351 FTCDNGHCIPERWKCDGEEEC-PDGSDESETTCSLVGGGSGRREAIVGQEGCQSSEDSGA 409
Query: 253 -------------ALSKKCIPHNWLCDEEMDCSTDDI-------VDNTDEDWDKFHQCFN 292
A C P + C +T + D +DE C
Sbjct: 410 RPCPEPWRFSAGRAFEAVCSPSEFQCGNRTCIATVFVCDGDDDCGDGSDERGCPAQGCGP 469
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSS- 350
+ +C S CIP WLCD + DC DD D E + A C E CGS
Sbjct: 470 QEFRCNGS-SCIPERWLCDGQADC--DDRSDEAPERCGRGAGTEAPATCGAGEFPCGSGE 526
Query: 351 -------------------------------------NQCVALSKFCDGKPDCSNGEDEG 373
CV ++ CD +P C +G DE
Sbjct: 527 CIHLTWKCDGDADCKDKSDEASCASVTCGAEEFQCADGTCVPRARRCDREPHCPDGSDEA 586
Query: 374 PFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCT 430
+C N CSH C G C CP G + +K C D +EC +C Q C
Sbjct: 587 GCLQEADECVHNNGGCSHICRDLKLGYACECPPGYELLDKKTCGDINECDNPDACSQICI 646
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNV--PQDEPASIIFSSTVDIRRIHLN 480
N + C C GY + K+C AV P S+IF++ ++RRI+L
Sbjct: 647 NYKGYFKCECHAGYEMDTLAKTCKAVAACPPPGTSPSLIFTNRHEVRRINLG 698
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
L+ LA+++ H++ + +S + + L S DL P +D
Sbjct: 756 LHSPEGLAVDWVHKHLYWTDSGNKTISVATVDGGRRKTLF-SHDLSEPRAIAVDPLHGFM 814
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
R+EK+G++G +R LV NI+WP+ + +D LYW DS L+ + S+ +
Sbjct: 815 YWSDWGDQARIEKSGLNGVDRQVLVLDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFN 874
Query: 158 GSHNAVL 164
+ VL
Sbjct: 875 DGNRKVL 881
>gi|350593227|ref|XP_003359471.2| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Sus scrofa]
Length = 631
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 141/350 (40%), Gaps = 93/350 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESW 222
C ++ +C S+ QC++ CDG DC GEDE + C+ ++ C G CI S
Sbjct: 220 CSKDQFQC-SNGQCISAKWKCDGHEDCKYGEDEKNCEPASPTCSSSEYICSSGGCISASL 278
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC----------- 271
KC+G DC DGSDE + C+ +C Q +C CIP WLCD DC
Sbjct: 279 KCNGEYDCA-DGSDEMD-CVTECKEDQFRCRNKAHCIPIRWLCDGVHDCVDGSDEENCDR 336
Query: 272 -------------------------STDDIVDNTDEDWD---KF-------HQCFNGQVQ 296
DD DN+DE D KF H+C N ++
Sbjct: 337 GGNICRADEFLCNNSLCKLQFWVCNGEDDCGDNSDEAPDMCVKFLCPPTRPHRCRNNRI- 395
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVA 355
C+ +C+ DD DN+DED ++ A C +E C S+ +C+
Sbjct: 396 ------CLQPEQICN-----GIDDCGDNSDEDPCGGKLTYKARPCKKDEFAC-SNKKCIP 443
Query: 356 LSKFCDGKPDCSNGEDE----------------GPFCNNKADCENLKCSHKCSPTPRGAM 399
+ CD DC +G DE P C + A C +K S
Sbjct: 444 MDHQCDQLDDCGDGSDEQGCRITPTEYTCEDNVNP-CGDDAYCNQIKTS---------VF 493
Query: 400 CFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLR 447
C C G +N QC D +ECL+ G+C C N SY C C + + R
Sbjct: 494 CRCKPGFQRNMKNRQCEDLNECLLFGTCSHQCINVEGSYKCVCDQNFQER 543
>gi|157169460|ref|XP_001651528.1| vacuolar sorting protein (vps) [Aedes aegypti]
gi|108878420|gb|EAT42645.1| AAEL005861-PA [Aedes aegypti]
Length = 2070
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/213 (35%), Positives = 98/213 (46%), Gaps = 24/213 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P C S QCV CD DC +G DE A C +F+CG G+CI +SW C
Sbjct: 1050 CPPYMFTCKSDKQCVPKYFVCDYDRDCLDGSDEQNCKPASCKSDEFTCGNGRCINKSWLC 1109
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC DG+DE N T + +C + +C + CIP W CD E DC+ D
Sbjct: 1110 DGEDDC-RDGTDERNCNKNSTTVVECKADEFRCNGTNTCIPKLWRCDTEQDCN-----DG 1163
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE +C CA +CI W CD E DC D +DE N
Sbjct: 1164 SDEANCSRKECEPWMFMCASDMRCIYKTWQCDGEKDCK-----DGSDE-------KNCNS 1211
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CH +C ++++CV CDG DC + DE
Sbjct: 1212 CHDWMFKC-ANDKCVPYWWKCDGVNDCGDESDE 1243
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 105/230 (45%), Gaps = 32/230 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KC 217
S V C +E RC +N C+ CD + DC++G DE EC P F C +C
Sbjct: 1128 STTVVECKADEFRCNGTNTCIPKLWRCDTEQDCNDGSDEANCSRKECEPWMFMCASDMRC 1187
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
I ++W+CDG DC +DGSDE N + C + +CA + KC+P+ W CD DC
Sbjct: 1188 IYKTWQCDGEKDC-KDGSDEKNC--NSCHDWMFKCA-NDKCVPYWWKCDGVNDCGDESDE 1243
Query: 272 ----STDDIVDNTDE---DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
ST + T + K C + +C + CI ++CD DC+ + DN
Sbjct: 1244 TGCNSTQPVTSTTIKPIPTRKKERNCGLHEFRCD-NGVCISKRFVCDGYEDCAKGEDEDN 1302
Query: 325 --TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
T + C +C S C+ + K+C+ DC++G DE
Sbjct: 1303 CPTQKQ-----------CSNKHFKCRSDGMCLPMDKYCNNVVDCADGSDE 1341
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 129/313 (41%), Gaps = 65/313 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + M G+N ++ ++ + + +D++YW D +N+V S D H ++
Sbjct: 873 IASSDMEGKNFIKILQQDSRVAHPFAVAVLKDLMYWDDWKMNSVYSA--DKDHGIMINII 930
Query: 168 NELRCGS-------------SNQCVALSK---FCDGKPD------CSNGEDEG------- 198
E S SN C +K C G P+ C +G ++
Sbjct: 931 AEEMMNSMDLKIYGHSVQEGSNACSVGNKCSHICVGAPNSGYSCLCPDGMEKNAQGQCLC 990
Query: 199 -----PFCNAECTPGQFSCGM-------GKCIPESWKCDGFVDCL----EDG--SDEPNT 240
PF N C +CG C+P +KCDG DC E+G SD+P
Sbjct: 991 PGGGTPFSNNTCARSGSTCGSKFFDCKNNICVPLIYKCDGDDDCGDRSDEEGCPSDKP-- 1048
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C C K+C+P ++CD + DC +D +DE K C + + C +
Sbjct: 1049 ---PCPPYMFTCKSDKQCVPKYFVCDYDRDC-----LDGSDEQNCKPASCKSDEFTCG-N 1099
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+CI +WLCD E DC D TDE S V C +E RC +N C+ C
Sbjct: 1100 GRCINKSWLCDGEDDCR-----DGTDERNCNKNSTTVVECKADEFRCNGTNTCIPKLWRC 1154
Query: 361 DGKPDCSNGEDEG 373
D + DC++G DE
Sbjct: 1155 DTEQDCNDGSDEA 1167
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 89/244 (36%), Gaps = 75/244 (30%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNAECTP----------- 207
CH +C ++++CV CDG DC + DE P + P
Sbjct: 1212 CHDWMFKC-ANDKCVPYWWKCDGVNDCGDESDETGCNSTQPVTSTTIKPIPTRKKERNCG 1270
Query: 208 -GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLC 265
+F C G CI + + CDG+ DC + G DE N QC N +C C+P + C
Sbjct: 1271 LHEFRCDNGVCISKRFVCDGYEDCAK-GEDEDNCPTQKQCSNKHFKCRSDGMCLPMDKYC 1329
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ +DC+ D +DED C + ST
Sbjct: 1330 NNVVDCA-----DGSDED--------------------------CKFKPSTSTS------ 1352
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
+ N +P C N C AL CDGKPDC +G DE CE +
Sbjct: 1353 --------TGNNCTSNPGVFAC--DNTCFALMVLCDGKPDCYDGTDED-------HCEKM 1395
Query: 386 KCSH 389
K H
Sbjct: 1396 KTKH 1399
>gi|405959326|gb|EKC25377.1| Low-density lipoprotein receptor-related protein 2 [Crassostrea
gigas]
Length = 626
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 84/178 (47%), Gaps = 19/178 (10%)
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
+ C Q+ C + KC+ +CD + DC D D D +K C P E +
Sbjct: 6 YKPCLGDQMTCD-NYKCVNQTSVCDGKDDCG--DASDEKGCDREK--------CSPQEWQ 54
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
C S QC+ + K C DC GEDEGP C ++ C+ L C +C TP G MCFC G
Sbjct: 55 CPESKQCIPIGKLCTETSDCPQGEDEGPTC-SRTYCQQLSCDFRCQATPTGGMCFCNTGY 113
Query: 407 ----NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
N+T C+D +EC GSCDQ C N Y C C GY L +GK P+
Sbjct: 114 QIDPRDNRT-CIDYNECKTWGSCDQKCKNFDGYYTCGCYPGYIL--NGKKSCRSTAPR 168
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
R+E+A M G R LV K+I P+S+ +D ++W DS L+ +++V G
Sbjct: 312 RIERAYMDGSKRFLLVNKDIIAPTSITVDAVNKRIFWTDSRLDHIQTVDFSG 363
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C P E +C S QC+ + K C DC GEDEGP C+
Sbjct: 48 CSPQEWQCPESKQCIPIGKLCTETSDCPQGEDEGPTCS 85
>gi|351715301|gb|EHB18220.1| Low-density lipoprotein receptor-related protein 8, partial
[Heterocephalus glaber]
Length = 860
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 152/350 (43%), Gaps = 54/350 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQ-FSCGMG--KCIPE 220
C ++ CG+ + C+ CDG+ +C +G DE C + P + SCG KC+P
Sbjct: 4 CADSDFTCGNGH-CIPERWKCDGEEECPDGSDESEATCTQQVCPAEKLSCGPTSHKCVPA 62
Query: 221 SWKCDGFVDCLEDGSDEPN--TC---------IHQCFNGQVQCALSKKC--IPHNWLCDE 267
SW+CDG DC E G+DE TC Q G + A + IP L
Sbjct: 63 SWRCDGEKDC-EGGADEAGCATCESGVRTPGSARQGGKGHLSKASESQHPEIPSGALMSL 121
Query: 268 EMDCSTD-DIVDNTDEDWDKFHQCFNG------------QVQCALSKKCIPHNWLCDEEM 314
+ S D D +DE + + G Q C S +CI W CD +
Sbjct: 122 RQETSRQFDCEDRSDEAAELCGRAGLGTTPAPAACTPSTQFTCR-SGECIHLGWRCDGDR 180
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC D +DE + +L C E +CG CV K C+ + DC +G DE
Sbjct: 181 DCK-----DKSDE-------ADCLLGTCRGEEFQCGDGT-CVLAIKRCNQERDCPDGSDE 227
Query: 373 GPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTC 429
+C N CSH C+ +G C CPAG + ++ CVD DEC +C Q C
Sbjct: 228 AGCLQGLNECLHNNGGCSHICTDLKKGFECSCPAGLRLLDQKTCVDIDECEDPDACSQIC 287
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
N + C C GY + +SC AV + S+IF++ ++RRI L
Sbjct: 288 VNYKGYFKCECHPGYEVDTLTESCKAV---AGKSPSLIFTNRHEVRRIDL 334
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 461 KIEKSGLNGVDRQTLVSDNIEWPNGIALDLLNQRLYWVDSKLHELSSIDFSGGNRKML 518
>gi|170583970|ref|XP_001896803.1| Calcium binding EGF domain containing protein [Brugia malayi]
gi|158595866|gb|EDP34347.1| Calcium binding EGF domain containing protein [Brugia malayi]
Length = 888
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 150/417 (35%), Gaps = 132/417 (31%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIPESWKCDGFVDCL 231
+C+ + CDG+PDC + DE N C QF C K CIP +WKCDG DC+
Sbjct: 103 RCIPKTWVCDGEPDCRDSSDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCDGQNDCV 162
Query: 232 EDGSDEPN--------TCIHQCFNG----------------------------------- 248
D SDE + T QC NG
Sbjct: 163 -DMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHEKCPNTTCDATE 221
Query: 249 QVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+ QC CIP W+CD +EMDCS V + + H F + C
Sbjct: 222 KFQCRSGGTCIPRMWVCDGEADCKDHSDEMDCSDIGTVISQNPHMVTCHHSF--EFPCRN 279
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
CI W CD EMDC+ D +DE+ + + +C NE C +C+ +K+
Sbjct: 280 GGHCINKAWKCDGEMDCA-----DGSDEE-----NCDKRVCTANERTC-DMGRCIPANKW 328
Query: 360 CDGKPDCSNGEDEG----PFCNNKADCENLKCSHKCSPTP-------------------- 395
CDG DC + DE P K D EN + ++C TP
Sbjct: 329 CDGFDDCLDASDEKDCTPPAKQEKCD-ENTE--YRCPGTPLQCIKLEDLCVDGKPNNDCL 385
Query: 396 ----------------------------RGAMCFCPAGQNPNKTQCVDADECLIDGSCDQ 427
G +C CP G C+D DEC G C Q
Sbjct: 386 KSVCSSHLNLSLCDDSSNNHCKCRTTKFNGTICHCPRGFELKGRSCIDIDECAQIGICAQ 445
Query: 428 TCTNTHLSYVCSCTEGYTL---RPDG--KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C N YVC C GY L R G KS +P ++ S+ IRR L
Sbjct: 446 KCINVPGGYVCECYPGYHLTMGRSTGTNKSAGICRAKGSDPL-LLLSNRATIRRFDL 501
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 111/276 (40%), Gaps = 83/276 (30%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-----GM------- 214
N+ +C ++ +C+ LS CDG DC G+DE C T +F C G+
Sbjct: 39 NQYKC-NNGKCIPLSWRCDGDEDCPEGDDEDKCSRISCKTDREFECVGDSIGLPLYASKI 97
Query: 215 ----GKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCD 266
+CIP++W CDG DC D SDE TC F + ++ CIP W CD
Sbjct: 98 RDYPARCIPKTWVCDGEPDC-RDSSDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCD 156
Query: 267 EEMDCSTDDIVDNTDE-DWDKFH-------QCFNG------------------------- 293
+ DC VD +DE D K QC NG
Sbjct: 157 GQNDC-----VDMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHEK 211
Query: 294 ----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHN--A 337
+ QC CIP W+CD E DC D++DE D S N
Sbjct: 212 CPNTTCDATEKFQCRSGGTCIPRMWVCDGEADCK-----DHSDEMDCSDIGTVISQNPHM 266
Query: 338 VLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V CH + E C + C+ + CDG+ DC++G DE
Sbjct: 267 VTCHHSFEFPCRNGGHCINKAWKCDGEMDCADGSDE 302
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
+ +V H H E C + C+ + CDG+ DC++G DE CT +
Sbjct: 256 IGTVISQNPHMVTCHHSFEFPCRNGGHCINKAWKCDGEMDCADGSDEENCDKRVCTANER 315
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDE 237
+C MG+CIP + CDGF DCL D SDE
Sbjct: 316 TCDMGRCIPANKWCDGFDDCL-DASDE 341
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 104 LDERLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
L +E+AGM G NR+ +++ + I+WP+ L +D + LYW D+ + + S G H
Sbjct: 635 LSAHIERAGMDGNNRTVIISGEMIKWPNGLALDILEQRLYWADAKVKLIMSCDYWGQHIR 694
Query: 163 VLCHPNE 169
++ +E
Sbjct: 695 LVLRSHE 701
>gi|260803752|ref|XP_002596753.1| hypothetical protein BRAFLDRAFT_73747 [Branchiostoma floridae]
gi|229282013|gb|EEN52765.1| hypothetical protein BRAFLDRAFT_73747 [Branchiostoma floridae]
Length = 1562
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK 216
+G C P+E C S+ +CV ++ CDG+ DC +G DE C+ F C G+
Sbjct: 1160 EGEEGVGTCTPDEFTC-SNARCVHMAWVCDGQNDCGDGTDETNCTMKTCSSVAFQCDNGQ 1218
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CIP+ + CDG DC D +DE C N + +C + +CIP +++CD E DC D
Sbjct: 1219 CIPQEYVCDGMPDC-SDYTDEQACPAPTCTNREFKCE-NGRCIPQSFVCDAEFDCGFGDH 1276
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
D D +C G+ C + C+P CD DC D +DE
Sbjct: 1277 SDEADCG----DECGVGEFWCGIQSLCMPLTLRCDGHDDCG-----DGSDE--------A 1319
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P+E C ++ C+ +K CD DC G DE
Sbjct: 1320 LCSCLPHEFTC-ANGYCILRTKLCDSVEDCPRGVDE 1354
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 190 DCSNGED--EGPFCNAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
+C+ GE G C E CTP +F+C +C+ +W CDG DC DG+DE N +
Sbjct: 1146 NCTGGEWICTGELCEGEEGVGTCTPDEFTCSNARCVHMAWVCDGQNDC-GDGTDETNCTM 1204
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
C + QC + +CIP ++CD DCS D TDE C N + +C + +
Sbjct: 1205 KTCSSVAFQCD-NGQCIPQEYVCDGMPDCS-----DYTDEQACPAPTCTNREFKCE-NGR 1257
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP +++CD E DC D D D C E CG + C+ L+ CDG
Sbjct: 1258 CIPQSFVCDAEFDCGFGDHSDEAD---------CGDECGVGEFWCGIQSLCMPLTLRCDG 1308
Query: 363 KPDCSNGEDEG 373
DC +G DE
Sbjct: 1309 HDDCGDGSDEA 1319
>gi|194380930|dbj|BAG64033.1| unnamed protein product [Homo sapiens]
Length = 646
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 206 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 265
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 266 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 318
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 319 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 372
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 373 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 406
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 137/340 (40%), Gaps = 94/340 (27%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH-------------------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 41 IGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEGHHRHTVYDG 100
Query: 148 ---------------------LNTVESV-RVDGSHNAVLC------------HPNEL--- 170
TVE + DGS+ L HP
Sbjct: 101 ALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHVYHPYRQPIV 160
Query: 171 --RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTPGQFSCGMG- 215
CG++N S C KP E P +C C+ QF C
Sbjct: 161 SNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSSTQFLCANNE 218
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
KCIP WKCDG DC DGSDE C + C GQ QC+ C LC+ +C
Sbjct: 219 KCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLCNAHQNCP-- 274
Query: 275 DIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DED + H C + + QCA +K+CIP +W CD DC DN+DED
Sbjct: 275 ---DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNSDEDSSHC 325
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C P + RC ++ +C+ + CD DC + DE
Sbjct: 326 ASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 361
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 103/216 (47%), Gaps = 27/216 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE C + C PGQF C G+CIP++W
Sbjct: 289 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 347
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
KCD DC D SDEP + H C N + C + +CIP +C+ DD
Sbjct: 348 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCN-----GVDDCR 401
Query: 278 DNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + C G +C + CIP W CD + DC DN+DE+ +
Sbjct: 402 DNSDEQGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEE-----NCA 450
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + QC+ CD DC + DE
Sbjct: 451 PRECTESEFRC-VNQQCIPSRWICDHYNDCGDNSDE 485
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 13/101 (12%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 414 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 472
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
CD + DC D SDE + + L K +PH +L
Sbjct: 473 CDHYNDC-GDNSDERD----------CEMRLMKLIVPHAFL 502
>gi|321478103|gb|EFX89061.1| hypothetical protein DAPPUDRAFT_304684 [Daphnia pulex]
Length = 2092
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 127/311 (40%), Gaps = 54/311 (17%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
S AV C P E C SS+ C+ + CDG+ DC +G DE N C P QF C +CI
Sbjct: 1117 SSTAVTCRPGEFSCSSSHYCLPAAWKCDGENDCIDGFDEVNCSNNSCEPWQFQCANKRCI 1176
Query: 219 PESWKCDGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+SW CD DC DGSDE P C +C +K C+P W CD +
Sbjct: 1177 MKSWVCDRENDC-HDGSDEVNCTATSTISPPRPFGNCSATMFECG-NKNCVPLWWKCDGQ 1234
Query: 269 MDC--------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
DC ST + D H C QC + CI +W+CD+E
Sbjct: 1235 DDCGDGSDELACPGTNHSTSVVTTTVAPD---SHTCGENHFQCN-NGDCIWESWVCDKES 1290
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-- 372
DCS + DE+ E RC S C+ S C+G DC++ DE
Sbjct: 1291 DCSQAE-----DEENCHGTETGGGGTECTEFRCLRSGGCIPFSALCNGHQDCADNTDEEG 1345
Query: 373 ----GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQT 428
P N +C + S +C G+MC P + C +A +C DG+ +
Sbjct: 1346 CGLIMPGTNLTVECP--RGSFRCD----GSMCL------PLRLYCNNATDCY-DGTDELN 1392
Query: 429 CTNTHLSYVCS 439
C + Y S
Sbjct: 1393 CASDKRVYQVS 1403
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 134/305 (43%), Gaps = 47/305 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C + C + C+ CDG DC + DE + C+ QF CG G+CIP WKC
Sbjct: 994 CPEDYFECQTLEMCIPSLWRCDGDNDCYDKSDEVNCTSPSCSTTQFQCGNGRCIPLHWKC 1053
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
D DC +DGSDE N + C + Q +C + +CI W CD E DC D +DED
Sbjct: 1054 DFDNDC-DDGSDETNCDYNPCSSDQFRCN-NGRCISARWRCDFEDDCR-----DGSDEDN 1106
Query: 284 ----------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
C G+ C+ S C+P W CD E DC +D DE
Sbjct: 1107 CTTTPASGGNSSTAVTCRPGEFSCSSSHYCLPAAWKCDGENDC-----IDGFDE---VNC 1158
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
S+N+ C P + +C ++ +C+ S CD + DC +G DE +C S P
Sbjct: 1159 SNNS--CEPWQFQC-ANKRCIMKSWVCDRENDCHDGSDE-------VNCT--ATSTISPP 1206
Query: 394 TPRG---AMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P G A F +N P +C D+C DGS + C T+ S T T+ P
Sbjct: 1207 RPFGNCSATMFECGNKNCVPLWWKCDGQDDCG-DGSDELACPGTNHSTSVVTT---TVAP 1262
Query: 449 DGKSC 453
D +C
Sbjct: 1263 DSHTC 1267
>gi|397487991|ref|XP_003815059.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 1 [Pan paniscus]
Length = 793
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C Q QC +K+CIP W CDE+ DC +D++DED C + C + C
Sbjct: 46 ECEKDQFQCR-NKRCIPSVWRCDEDDDC-----LDHSDEDDCPKKTCADSDFTCD-NGHC 98
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDG 362
I W CD E +C D +DE + +C +L CG +S++CV S CDG
Sbjct: 99 IHERWKCDGEEECP-----DGSDE---SEATCTKQVCPAEKLSCGPTSHKCVPASWRCDG 150
Query: 363 KPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADEC 419
+ DC G DE +C N CSH C+ G C CPAG Q ++ C D DEC
Sbjct: 151 EKDCEGGADEAGCATWLNECLHNNGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDEC 210
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N + C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 211 KDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 267
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ G A C ++ +C + +C+ CD DC + DE C F+C G
Sbjct: 38 LGGQGPAKECEKDQFQC-RNKRCIPSVWRCDEDDDCLDHSDEDDCPKKTCADSDFTCDNG 96
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC 271
CI E WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 97 HCIHERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC 154
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 394 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 451
>gi|326935571|ref|XP_003213843.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like,
partial [Meleagris gallopavo]
Length = 479
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/299 (31%), Positives = 133/299 (44%), Gaps = 38/299 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C ++ +C+A CDG DC++G DE C C Q+ C G CIP W+C
Sbjct: 4 CSESEFSC-ANGRCIAGRWKCDGDHDCADGSDEKD-CIPRCEFDQYQCKNGHCIPMRWRC 61
Query: 225 DGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DC+ DG+DE + T + C + QC + C P W CD E DC D D E
Sbjct: 62 DADADCM-DGTDEEDCGTGVRTCPLDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDENPE 117
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH- 341
+ KF N +C + C+ CD D+ DNTDE + + C
Sbjct: 118 ECLKFQCPPNRPFRCKNDRVCLWIGRQCD-----GIDNCGDNTDEKDCESPTAKPKSCSQ 172
Query: 342 -PNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------------GPFCNNKADCENL 385
NE C + +C++ + C+ DC +G DE C ++A C
Sbjct: 173 DKNEFLC-ENKKCISANLRCNFFDDCGDGSDEKSCSHEHKSYDCMTNATMCGDEAQCIQA 231
Query: 386 KCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
+ S C+ C + P+K C D +ECL G+C Q C NT S+VCSC + +
Sbjct: 232 QSSTYCT-------CRRGFQKVPDKNSCQDVNECLRFGTCSQLCNNTKGSHVCSCAKNF 283
>gi|148693264|gb|EDL25211.1| low density lipoprotein receptor, isoform CRA_a [Mus musculus]
Length = 364
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 107/222 (48%), Gaps = 33/222 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
SW+CDG VDC D ++ P TC F Q KCI ++CD + DC +
Sbjct: 86 SWRCDGQVDCENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC-----L 135
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-------D 330
D +DE + C +C S CIP W CD ++DC VD +DE W D
Sbjct: 136 DGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGRD 188
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C E CGSS +C+ S CDG+ DC + DE
Sbjct: 189 TASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 114/256 (44%), Gaps = 33/256 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C ++ RC +C++ CDG DC +G DE C P F C CIP W
Sbjct: 108 TCSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWA 166
Query: 224 CDGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CDG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 167 CDGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK 224
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 -----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----L 269
Query: 333 FSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSH 389
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 270 GCVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSH 328
Query: 390 KCSPTPRGAMCFCPAG 405
C G+ C CP+G
Sbjct: 329 ICKDLKIGSECLCPSG 344
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
>gi|344235640|gb|EGV91743.1| Low-density lipoprotein receptor-related protein 8 [Cricetulus
griseus]
Length = 764
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/346 (31%), Positives = 143/346 (41%), Gaps = 66/346 (19%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
+ S R GS + +C P+E +C S++ C+A CDG DC +G DE + C P +F
Sbjct: 1 MRSGRPTGSLSCAVCAPHEFQC-SNHSCLASVFVCDGDDDCGDGSDERGCSDPACPPREF 59
Query: 211 SCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CG G CIPE W CDG DC ED SDE + GQ A C+P
Sbjct: 60 RCGGGGTCIPERWVCDGQFDC-EDRSDETAELCGRV--GQETMATPAACVP--------- 107
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
Q C S +CI W CD + DC D D D
Sbjct: 108 ----------------------TTQFTCR-SGECIHLGWRCDGDRDCK--DKSDEAD--- 139
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNNKADC 382
C N+ +CG CV K C+ + DC +G DE F N+
Sbjct: 140 ----CSAPGPCSENDFQCGDGT-CVLAIKRCNQEHDCPDGSDEAGCLQVAPTFQRNRRRP 194
Query: 383 ENLK--------CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTH 433
L CSH C+ G C CPAG Q ++ C D DEC +C Q C N
Sbjct: 195 RGLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYK 254
Query: 434 LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 255 GYFKCECHPGYEMDSQTKNCKAV---AGKSPSLIFTNRHEVRRIDL 297
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 421 FQAKIEKSGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 480
Query: 164 L 164
L
Sbjct: 481 L 481
>gi|2344803|dbj|BAA21825.1| ApoER2delta4-7 [Homo sapiens]
Length = 793
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C Q QC +++CIP W CDE+ DC +D++DED C + C + C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDEDDCPKKTCADSDFTCD-NGHC 98
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDG 362
I W CD E +C D +DE + +C +L CG +S++CV S CDG
Sbjct: 99 IHERWKCDGEEECP-----DGSDE---SEATCTKQVCPAEKLSCGPTSHKCVPASWRCDG 150
Query: 363 KPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADEC 419
+ DC G DE +C N CSH C+ G C CPAG Q ++ C D DEC
Sbjct: 151 EKDCEGGADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDEC 210
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N + C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 211 KDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAAG---GKSPSLIFTNRYEVRRIDL 267
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ G A C ++ +C + +C+ CD DC + DE C F+C G
Sbjct: 38 LGGQGPAKECEKDQFQC-RNERCIPSVWRCDEDDDCLDHSDEDDCPKKTCADSDFTCDNG 96
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC 271
CI E WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 97 HCIHERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC 154
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 394 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 451
>gi|326671519|ref|XP_691606.5| PREDICTED: low-density lipoprotein receptor-related protein 1
[Danio rerio]
Length = 996
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/363 (29%), Positives = 145/363 (39%), Gaps = 76/363 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE +C+ +FSC G+CI WKC
Sbjct: 45 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEDKCVPRQCSESEFSCTSGRCIAGRWKC 103
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C N Q C + CIP W CD + DC +N
Sbjct: 104 DGDHDCA-DGSDE-HGCDVKCDNDQFLCN-NGHCIPFRWRCDADADCMDGSDEENCHTGV 160
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KYFSHNAVLCHP 342
+F C + QC + C P W CD E DC DN+DE+ D K F C P
Sbjct: 161 GQF--CPLDEFQCN-NTLCKPLGWKCDGEDDCG-----DNSDENPDVCKQFQ-----CPP 207
Query: 343 N-ELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------------------GPF 375
+ + RC + C+ LSK CDG +C + DE
Sbjct: 208 SRQFRCHNDRVCLPLSKHCDGVNNCGDNSDEQNCQTPPPAVCGKSEFTCSSGKCISLNLR 267
Query: 376 CNNKADCEN-----LKCSHK-------------------CSPTPRGAMCFC-PAGQNPNK 410
CN DCE+ + C+ K C + C C P Q +
Sbjct: 268 CNFFNDCEDYGSDEINCNKKDSGLNECRLNRSMCGDEGHCVVNGSDSFCSCRPGFQKTHP 327
Query: 411 TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVPQDEPAS 465
C D +EC G C C NT + CSC + + T + D A+ V D
Sbjct: 328 QTCSDVNECRQFGICSHICNNTKGGHKCSCHKNFIRVNDTCKADSSDKQALYVADDNEIR 387
Query: 466 IIF 468
++
Sbjct: 388 SLY 390
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAE-CTPGQFSCGMGKCIPE 220
+ C +E RC S +C+ CDG+ DC + DE C+ C P QF C +C+P
Sbjct: 1 MTCGVDEFRCKDSGRCIPARWKCDGEDDCGDSSDEPKEECDERTCEPYQFRCKNNRCVPG 60
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CD DC D SDE QC + C S +CI W CD + DC+ D +
Sbjct: 61 RWQCDYDNDC-GDNSDEDKCVPRQCSESEFSCT-SGRCIAGRWKCDGDHDCA-----DGS 113
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
DE +C N Q C + CIP W CD + DC +D +DE+ H V
Sbjct: 114 DEHGCDV-KCDNDQFLCN-NGHCIPFRWRCDADADC-----MDGSDEE----NCHTGVGQ 162
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C +E +C ++ C L CDG+ DC + DE P
Sbjct: 163 FCPLDEFQCNNT-LCKPLGWKCDGEDDCGDNSDENP 197
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY + LYW D+ L+ + SVR++G+ +
Sbjct: 534 KIETAAMDGTLRETLVHDNIQWPTGLAVDYFNERLYWADAKLSVIGSVRLNGTDPVI 590
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E A M+G NR L++ I P ++V+D + +YW D + +E+ +DG+ L H
Sbjct: 491 IEVAQMNGRNRKTLISGMIDEPYAIVVDPQRGTMYWADWGNHPKIETAAMDGTLRETLVH 550
Query: 167 PN 168
N
Sbjct: 551 DN 552
>gi|339247087|ref|XP_003375177.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
gi|316971556|gb|EFV55314.1| putative Low-density lipoprotein receptor domain class A
[Trichinella spiralis]
Length = 749
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 127/332 (38%), Gaps = 72/332 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---------FCNA-ECTPGQFSCGM 214
C N+ +C +N+C+ C+G DC +G DE + N EC ++ C M
Sbjct: 221 CLENQFKC-KNNRCIDKEFICNGMDDCGDGTDEESCMDHLLFEEYSNRLECKNFEYKCYM 279
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
G CIP S CDGF DC + H C + QC C P +W+CD DC
Sbjct: 280 GPCIPTSVVCDGFRDCPNGDDEHKCPTFHICHENEFQCKDKLFCFPESWVCDGIADCR-- 337
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +D E+DC +D + +
Sbjct: 338 ---DKSD-------------------------------EIDCPNNDFLYD---------- 353
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
LC + C S C+ K CDG DC++ DE +C EN C +KC
Sbjct: 354 ----LCSSDSFIC-SDGSCIPREKMCDGSADCNDKSDEHIYC-GACKTENGGCPNKCREG 407
Query: 395 PRGAMCFC-----PAGQNPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
G C C A ++ C D C L CD C + ++ CSC+EGY L
Sbjct: 408 AFGVECQCGNTWRQASLFSSEDHCPKVDYCELHTDECDHFCHSNATNFSCSCSEGYDLEY 467
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+ ++C + ++FS IR I +N
Sbjct: 468 NLRTC---KLKHKHLGHLVFSIGHQIRSISIN 496
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 101/239 (42%), Gaps = 52/239 (21%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN----------------------AECTP 207
C S + + K CDGK DC + EDE N +C
Sbjct: 79 FECWKSETYIPVEKVCDGKVDCQDNEDESICPNIKNVTTEEDVEKHQRSIKAKNEKKCGI 138
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQC-ALSKKCIP 260
+F C GKCI + CDG DC+ DGSDE N + C + C + C+P
Sbjct: 139 HKFRCKNGKCISKKKLCDGEFDCI-DGSDEQNCSVKMGLMKSDCPSNTFHCNSEPSICLP 197
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+ +CD E DC N +++ H+C Q +C + +CI ++C+ DD
Sbjct: 198 VDLICDFERDCP------NGEDEMHCEHECLENQFKCK-NNRCIDKEFICN-----GMDD 245
Query: 321 IVDNTDED-------WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D TDE+ +++Y N + C E +C C+ S CDG DC NG+DE
Sbjct: 246 CGDGTDEESCMDHLLFEEY--SNRLECKNFEYKC-YMGPCIPTSVVCDGFRDCPNGDDE 301
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 110 KAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ M G++ L K + WP+S+ +DY +D++YW D+ +E R+DGS V+
Sbjct: 628 RVAMDGQSWQVLHHKKLSWPNSVAVDYVRDMVYWMDAKYKLIERSRLDGSEREVV 682
>gi|195350484|ref|XP_002041770.1| GM11366 [Drosophila sechellia]
gi|194123575|gb|EDW45618.1| GM11366 [Drosophila sechellia]
Length = 2360
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 158/377 (41%), Gaps = 82/377 (21%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA---ECTPGQFSCGMGKCIP 219
C+P + +CG+ N+C+ CD DC + DE C EC+ +F CG GKCI
Sbjct: 1411 CNPETDFKCGN-NRCIPKQWMCDFADDCGDASDENEAVCKGRYRECSESEFRCGNGKCIS 1469
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------- 271
W+CD DC D SDE + +QC NG QCA S CI + CD + DC
Sbjct: 1470 SRWQCDHEDDC-GDNSDEMHCEGYQCKNGTFQCA-SGHCIASYFRCDGDRDCRDMSDEVG 1527
Query: 272 -------------------------------STDDIVDNTDEDW---DKFHQCFNGQVQC 297
TDD D +DED F+ + QC
Sbjct: 1528 CPPRFPGGRYCPESRFQCNNNLCVSLSDLCDGTDDCGDGSDEDPSVCSDFNCDTLRRFQC 1587
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ----- 352
+ + +C+ +CD D+ D +DE+ N LC + C Q
Sbjct: 1588 S-NHRCVARYQICD-----GVDNCGDGSDEN-------NMTLCASKQKPCDLYTQYQCAN 1634
Query: 353 --CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK---CSHKC-SPTPRGAMCFCPAG- 405
C+ S+ CD DC + DE C++ + C C H C + T G +C C G
Sbjct: 1635 KHCIERSQVCDFSDDCGDASDE-LGCHHTSSCSEANRGGCQHHCHNLTDGGYICTCYPGY 1693
Query: 406 --QNPNKTQCVDADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
NK +C D DECL +C C N + +Y CSC EG+ L DG S V + E
Sbjct: 1694 IIAADNKKKCSDVDECLTRQHTCSHQCHNLNGTYSCSCREGFHL-TDGAS--GVCRAEKE 1750
Query: 463 PASIIFSSTVDIRRIHL 479
++F++ +IR + L
Sbjct: 1751 DVILVFANGQEIRGLDL 1767
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 38/247 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C N L+C +N CV CDG DC + DE P C F C +CIP +W
Sbjct: 667 CPANHLKCEKTNICVEPYWLCDGDNDCGDNSDEDPLHCGQRTCPTNSFRCPNHRCIPATW 726
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC + + P+ C + CF C + CIP ++CD + DC +DN
Sbjct: 727 YCDGDDDCGDGADEPPDYCKSEGRTCFGDLFTCD-NGNCIPRIYICDGDNDC-----LDN 780
Query: 280 TDEDWDKFHQCFN------GQVQCALSK-----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
+DED HQC + + C +K +CIP W+CD + DC VD DE+
Sbjct: 781 SDED--NRHQCNDRKCDEETEFTCVENKSWQRAQCIPKKWICDGDPDC-----VDGADEN 833
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD------- 381
+ C + CG+ +C+ CD DC +G DEG FCN+K
Sbjct: 834 TTLHNCATQQPCGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEF 892
Query: 382 -CENLKC 387
C+N KC
Sbjct: 893 TCQNFKC 899
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 140/324 (43%), Gaps = 48/324 (14%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ E++E++ + G+NR LV I +P ++ + N +YW D L V N V
Sbjct: 416 VREKIERSDLDGQNRELLVAATI-YPFAITVFRN--YIYWTDLQLRGVYRAEKHTGANMV 472
Query: 164 LC------HPNELRCGSS-------NQCVALSKFC--------DGKPDC-----SNGEDE 197
P ++R SS N C + C +GK +C + +E
Sbjct: 473 EMVKRLEDSPRDIRIYSSDRQKCNVNPCRINNGGCAQSCHPAPNGKAECKCDDSTKVVNE 532
Query: 198 GPFC---NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCA 253
G C N C +F C G+CI W CDG DC ++ ++PN C H C + +C
Sbjct: 533 GRMCAPRNNTCEASKFYCKNGRCISRMWSCDGDDDCGDNSDEDPNYCAYHSCSPNEFRCN 592
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ +CI +W CD E DC D +DE + C +G+ CA + +CIP +C+
Sbjct: 593 -NGRCIFKSWKCDHENDCK-----DGSDELGCIYPPCVDGEFTCA-NGRCIPQAQVCNGV 645
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DC + D T E C N L+C +N CV CDG DC + DE
Sbjct: 646 NDCKDNATSDETHER-----CPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCGDNSDED 700
Query: 374 PFCNNKADC--ENLKC-SHKCSPT 394
P + C + +C +H+C P
Sbjct: 701 PLHCGQRTCPTNSFRCPNHRCIPA 724
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 105/216 (48%), Gaps = 22/216 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 1285 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFSCKNGRCIPQL 1344
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 1345 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 1398
Query: 278 DNTDEDWDKFHQCF-NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
DN+DE + +C +C + +CIP W+CD DC D +DE+ +
Sbjct: 1399 DNSDELPENCPKCNPETDFKCG-NNRCIPKQWMCDFADDCG-----DASDEN-EAVCKGR 1451
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RCG+ +C++ CD + DC + DE
Sbjct: 1452 YRECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDE 1486
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 1214 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 1272
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 1273 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 1326
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + + + +CIP W+CD + DC D++DE N C RC G
Sbjct: 1327 CDPKTEFSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 1378
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 1379 QSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 1427
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 111/268 (41%), Gaps = 67/268 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C PNE RC ++ +C+ S CD + DC +G DE C G+F+C G+CIP++ C
Sbjct: 584 CSPNEFRC-NNGRCIFKSWKCDHENDCKDGSDELGCIYPPCVDGEFTCANGRCIPQAQVC 642
Query: 225 DGFVDCLEDG-SDEPNT---CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+G DC ++ SDE + C ++C + C+ WLCD + DC DN+
Sbjct: 643 NGVNDCKDNATSDETHERCPMNTTCPANHLKCEKTNICVEPYWLCDGDNDCG-----DNS 697
Query: 281 DED-------------------------W--------------------DKFHQCFNGQV 295
DED W + CF
Sbjct: 698 DEDPLHCGQRTCPTNSFRCPNHRCIPATWYCDGDDDCGDGADEPPDYCKSEGRTCFGDLF 757
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN---- 351
C + CIP ++CD + DC +DN+DED +++ ++ E C +
Sbjct: 758 TCD-NGNCIPRIYICDGDNDC-----LDNSDED-NRHQCNDRKCDEETEFTCVENKSWQR 810
Query: 352 -QCVALSKFCDGKPDCSNGEDEGPFCNN 378
QC+ CDG PDC +G DE +N
Sbjct: 811 AQCIPKKWICDGDPDCVDGADENTTLHN 838
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 1201 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 1258
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DC N D C +C S +CI +W CD + DC
Sbjct: 1259 CTPSATICDGVDDCGDRSDEQNCD------LPCPLSDFKCKSSGRCILDSWRCDGDADCK 1312
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED F C P + +C+ CD DC + DE +
Sbjct: 1313 -----DGSDEDPAVCFKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 1364
Query: 378 NKADC 382
+ +C
Sbjct: 1365 RQRNC 1369
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
++E + M G R PL+T+ I+ P+ L IDY+QD I+YW D+ LN +ES+R DGS +
Sbjct: 1904 KIEVSWMDGSKRRPLITELIRHPAGLTIDYSQDHIIYWVDTKLNAIESMRADGSRRKAIV 1963
Query: 166 HPNELR 171
++LR
Sbjct: 1964 RGDQLR 1969
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 1200 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 1254
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 1255 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 1302
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 1303 WRCDGDADCKDGSDEDPAVCFKRTCD 1328
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 104 LDERLEKAGMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
L + K GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H
Sbjct: 1019 LQAYIAKMGMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHR 1078
Query: 162 AVL 164
+
Sbjct: 1079 HTV 1081
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+ KA + G +PLVT I P L ID +YW DS L+T++ + +G++ V+
Sbjct: 56 RIGKALLDGSKWTPLVTSGISLPRDLTIDMQTHDIYWVDSKLDTIQKISYNGANRKVI 113
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C + CG+ +C+ CD DC +G DEG FCN++ C+ +F+C KCI
Sbjct: 845 CGEDMFTCGNG-RCINKGWICDHDNDCGDGTDEGKFCNSKYKTCSAQEFTCQNFKCIRNQ 903
Query: 222 WKCDGFVDCLEDGSDE 237
+CDG DC D SDE
Sbjct: 904 SRCDGEDDC-GDHSDE 918
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
F ++ + M G + +V K++ PS L IDY++ LYW D+ +E +DG +
Sbjct: 371 FGTSGKIFRTTMAGSLKRAIVDKDLSQPSGLAIDYDERRLYWTDAVREKIERSDLDGQNR 430
Query: 162 AVL 164
+L
Sbjct: 431 ELL 433
>gi|268564811|ref|XP_002639236.1| C. briggsae CBR-RME-2 protein [Caenorhabditis briggsae]
Length = 928
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 151/366 (41%), Gaps = 64/366 (17%)
Query: 169 ELRCGS-SNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
E CGS S +C+ CD DC NG+DE G C G C C+ +KCDG
Sbjct: 49 EFDCGSGSLRCIPAEWQCDNIADCDNGKDELGCTYAHHCGKGFMLCKNTVCVGGEFKCDG 108
Query: 227 FVDCLEDGSDE--------------------PNTCIH----QCFNGQVQCALSKKCIPHN 262
DC DGSDE PNT + +C +++C S +CI +
Sbjct: 109 EDDC-RDGSDELHCEYNSRRSRSDRVAPSPFPNTFVGHNGPECHPPRMRCR-SGQCIQAD 166
Query: 263 WLCDEEMDCST-DDIVDNTDEDWDKFHQCFNGQVQCALSKK------------CIPHNWL 309
+CD DC+ DD V+ T + Q L+ CIP+++L
Sbjct: 167 LICDGHADCTGGDDEVNCTRPNIIGI-QMLPVHTDSPLADPTLFTNDEYDGDVCIPNSFL 225
Query: 310 CDEEMDCSTDDIVDNTD-----EDWDKYFSHNAVLCH----PNELRCGSSNQ----CVAL 356
CD + DC DD D + + +++ S A H + C + C+ +
Sbjct: 226 CDGDADC--DDKSDELNCELNAPNEEQFLSGQADHMHSCSAAGKFACETKGTEMVVCLPM 283
Query: 357 SKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV 414
+ C+G +C G+DE C ++C +C H C TPRGA C C G + C
Sbjct: 284 NSTCNGIKECPFGDDESRHC---SECARTRCDHTCMNTPRGARCICQEGYKLADDGVTCE 340
Query: 415 DADECLIDGS-CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVD 473
D DEC G C C + SYVC C GY L DG SC E + S +
Sbjct: 341 DEDECATFGHICQHFCEDRLGSYVCKCANGYELEDDGHSCKYETSTTSE-GYLFISLGGE 399
Query: 474 IRRIHL 479
+R++ L
Sbjct: 400 VRQMPL 405
>gi|340382375|ref|XP_003389695.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Amphimedon queenslandica]
Length = 2365
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 157/374 (41%), Gaps = 83/374 (22%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIP 219
+ ++C +E+ C N+C+ L+ CDG CS+G DE CN C + C GKCI
Sbjct: 508 SGLMCGSHEMMCSVDNKCINLAFQCDGISHCSDGSDEQN-CNKGC---DYQCSNTGKCIS 563
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CDG DC D SDE C C Q QC + +C+ NWLCD E+DCS
Sbjct: 564 AVMRCDGRNDC-GDNSDE-ELCGGSCDSETQWQCPKTGQCLSRNWLCDREIDCSGGADEA 621
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---------W 329
N D + C G C+ S +CI N LCD DC D DED
Sbjct: 622 NCDGTYSNL--CGIGMFNCS-SGRCIDGNGLCDGFNDCP-----DGDDEDETICYVLNCK 673
Query: 330 DKYF---------SH--NAVL--------------CHPNELRCGSSNQCVALSKFCDGKP 364
DK+F +H + V C P++ C S C+ L++ C+G
Sbjct: 674 DKFFTCPEQCLERTHVCDGVYDCIDNRDEMNCNSRCGPDQFMC-ISGSCIRLNETCNGNV 732
Query: 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF--------------------CPA 404
DC++G DE N K E + C P G C CP
Sbjct: 733 DCADGSDEFLCPNTKK--ERVTCDTNEFPCLDGLQCIPDFSLCDDIEQCADGSDENECP- 789
Query: 405 GQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
G + N +C D +G CD C +T CSC +GY L + T ++ P
Sbjct: 790 GVSTNTNECNSTD----NGGCDHFCHDTVHYRYCSCRDGYAL-----NSTDMSTCYGPPP 840
Query: 465 SIIFSSTVDIRRIH 478
++F++ DI++++
Sbjct: 841 YLLFTNWFDIQKVN 854
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 78/194 (40%), Gaps = 51/194 (26%)
Query: 216 KCIPESWKCDGFVDCLEDGSDEP------------------NTCIHQCF---------NG 248
+ IP+ + CDG+ DC GSDE N CI+ F +G
Sbjct: 483 RPIPKDYVCDGYNDC-PSGSDESDCGSGLMCGSHEMMCSVDNKCINLAFQCDGISHCSDG 541
Query: 249 Q----------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
QC+ + KCI CD DC DN+DE+ Q QC
Sbjct: 542 SDEQNCNKGCDYQCSNTGKCISAVMRCDGRNDCG-----DNSDEELCGGSCDSETQWQCP 596
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+ +C+ NWLCD E+DCS N D + LC C SS +C+ +
Sbjct: 597 KTGQCLSRNWLCDREIDCSGGADEANCDGTYSN-------LCGIGMFNC-SSGRCIDGNG 648
Query: 359 FCDGKPDCSNGEDE 372
CDG DC +G+DE
Sbjct: 649 LCDGFNDCPDGDDE 662
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 106 ERLEKAGMHGENRSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+++ KA + G +++ + T ++ WP L IDY LYW D T+ DGS
Sbjct: 964 QQIFKASLDGTDKALFLSATDHVYWPVKLTIDYPTGTLYWIDVASKTIGKCHTDGSGRDT 1023
Query: 164 LCHPN 168
L N
Sbjct: 1024 LYSAN 1028
>gi|402586976|gb|EJW80912.1| calcium binding EGF domain-containing protein, partial [Wuchereria
bancrofti]
Length = 489
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 150/417 (35%), Gaps = 132/417 (31%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIPESWKCDGFVDCL 231
+C+ + CDG+PDC + DE N C QF C K CIP +WKCDG DC+
Sbjct: 69 RCIPKTWVCDGEPDCRDASDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCDGQNDCV 128
Query: 232 EDGSDEPN--------TCIHQCFNG----------------------------------- 248
D SDE + T QC NG
Sbjct: 129 -DMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHEKCPNTTCDATE 187
Query: 249 QVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
+ QC CIP W+CD +EMDCS V + + H F + C
Sbjct: 188 KFQCRSGGTCIPRMWVCDGEADCKDHSDEMDCSDIGAVISQNPHMVTCHHSF--EFPCRN 245
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
CI W CD EMDC+ D +DE+ + + +C NE C +C+ SK+
Sbjct: 246 GGHCINKAWKCDGEMDCA-----DGSDEE-----NCDKRVCTANERTC-DMGRCIPASKW 294
Query: 360 CDGKPDCSNGEDEG----PFCNNKADCENLKCSHKCSPTP-------------------- 395
CDG DC + DE P K D EN + ++C TP
Sbjct: 295 CDGFDDCLDASDEKDCTPPAKQEKCD-ENTE--YRCPGTPLQCIKLEDLCVDGKPNNDCL 351
Query: 396 ----------------------------RGAMCFCPAGQNPNKTQCVDADECLIDGSCDQ 427
G +C CP G C+D DEC G C Q
Sbjct: 352 KSVCSSHLNLSLCDDSSNNHCKCRTTKFNGTICHCPRGFELKGRSCIDIDECAQIGICAQ 411
Query: 428 TCTNTHLSYVCSCTEGYTL---RPDG--KSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C N YVC C GY L R G KS +P ++ S+ IRR L
Sbjct: 412 KCINVPGGYVCECYPGYHLTMGRSTGTNKSAGICRAKGSDPL-LLLSNRATIRRFDL 467
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 110/276 (39%), Gaps = 83/276 (30%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-----GM------- 214
N+ +C ++ +C+ LS CDG DC G+DE C T +F C G+
Sbjct: 5 NQYKC-NNGKCIPLSWRCDGDEDCPEGDDEDKCSRISCKTDREFECVGDSTGLPLYASKI 63
Query: 215 ----GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC----ALSKKCIPHNWLCD 266
+CIP++W CDG DC D SDE C Q C ++ CIP W CD
Sbjct: 64 RDYPARCIPKTWVCDGEPDC-RDASDEKGCQNITCEKDQFVCEEYKGHARMCIPMTWKCD 122
Query: 267 EEMDCSTDDIVDNTDE-DWDKFH-------QCFNG------------------------- 293
+ DC VD +DE D K QC NG
Sbjct: 123 GQNDC-----VDMSDEKDCQKTRTCGTNEFQCDNGVCIFKNWLCDGDDDCGDGSDEDHEK 177
Query: 294 ----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHN--A 337
+ QC CIP W+CD E DC D++DE D S N
Sbjct: 178 CPNTTCDATEKFQCRSGGTCIPRMWVCDGEADCK-----DHSDEMDCSDIGAVISQNPHM 232
Query: 338 VLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V CH + E C + C+ + CDG+ DC++G DE
Sbjct: 233 VTCHHSFEFPCRNGGHCINKAWKCDGEMDCADGSDE 268
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
+ +V H H E C + C+ + CDG+ DC++G DE CT +
Sbjct: 222 IGAVISQNPHMVTCHHSFEFPCRNGGHCINKAWKCDGEMDCADGSDEENCDKRVCTANER 281
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
+C MG+CIP S CDGF DCL D SDE +
Sbjct: 282 TCDMGRCIPASKWCDGFDDCL-DASDEKD 309
>gi|260807229|ref|XP_002598411.1| hypothetical protein BRAFLDRAFT_83186 [Branchiostoma floridae]
gi|229283684|gb|EEN54423.1| hypothetical protein BRAFLDRAFT_83186 [Branchiostoma floridae]
Length = 691
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 105/243 (43%), Gaps = 57/243 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++LRC +S C ++ CDG DC +G DE C GQF+C G+C+P S++C
Sbjct: 485 CSSSQLRCNNS-ACYNSNQRCDGNMDCRDGSDEFNCTTIRCQSGQFTCMNGQCVPGSYEC 543
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC DGSDE + C+ +G + +C+P ++CD + DC D +DE
Sbjct: 544 DHDNDC-GDGSDEHDDCVFPTCSGDQFTCQNGRCVPQEYICDLDNDCG-----DASDE-- 595
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C C P W C PN
Sbjct: 596 ---MSCL------PTPPACQPDQWAC-------------------------------PN- 614
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRGAMCFC 402
+ QC+ +S+ CDG+ DC N DE F + ++C L C H+C +P G +C+C
Sbjct: 615 -----TTQCIQISQLCDGQSDCPNNMDESRPGFSCSSSNCGTLACEHRCRASPDGGICYC 669
Query: 403 PAG 405
G
Sbjct: 670 QPG 672
>gi|444724854|gb|ELW65441.1| Low-density lipoprotein receptor-related protein 8 [Tupaia
chinensis]
Length = 1069
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 151/560 (26%), Positives = 213/560 (38%), Gaps = 115/560 (20%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----------WDK-YFKR 50
+ +C Q +C +++CIP W CDE+ DCS DN+DED W + R
Sbjct: 76 VKECEEDQFRCR-NERCIPSVWRCDEDDDCS-----DNSDEDDCRPRLCSWGWSQQALAR 129
Query: 51 ILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE--IFPLDERL 108
G+ +AL + R+ L ++Q SS AQ L SW A + PL R
Sbjct: 130 FAKGS-AVALLVDIRD--LAADERQEGSSGPGYAAQ----LKSWKPKATSCHLLPLHSRS 182
Query: 109 EKAGMHGE-----------NRSPLVTKNIQWPSSLV---IDYNQDILYWCDSH-LNTVES 153
+ HG + L T N + LV I + + +S N
Sbjct: 183 PFSTGHGRVCVCSGLSLQCAQLRLETMNSAHTACLVPSAISARRLLTSPPESQQANRQGH 242
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQ-FS 211
+G C ++ C + C+ CDG+ +C +G DE C + P + S
Sbjct: 243 SEGNGGGAKKTCADSDFTC-DNGHCIPERWKCDGEEECPDGSDESEATCTKQVCPAEKLS 301
Query: 212 CGMG--KCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCA----------LSKK 257
CG KC+P SW+CDG DC E G+DE T + Q A L
Sbjct: 302 CGPAGHKCVPASWRCDGEKDC-EGGADEAGCATLLRSISYADAQEAGSPPARRGANLGIS 360
Query: 258 CIPHNW-----------------------------------LCDEEMDCSTDDIVDNTDE 282
I NW LCD DC D +DE
Sbjct: 361 IIWGNWYQGACAFPTNAPTSQKPRRGKKPATVRNVGVPLPCLCDGARDCK-----DKSDE 415
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C + QC C+ C++E DC D +DE + P
Sbjct: 416 ADCPSGTCRGDEFQCG-DGTCVLAIKRCNQEQDCP-----DGSDE---AGCLQESTCEGP 466
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMC 400
+C S +CV K CD + DC + DE +C N CSH C+ G C
Sbjct: 467 RRFQC-KSGECVDGGKVCDAQRDCRDWSDELLKGCGLNECLHNNGGCSHICTDLKIGFEC 525
Query: 401 FCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CPAG + ++ C D DEC +C Q C N + C C GY + K+C AV
Sbjct: 526 TCPAGFRLLDQKTCGDIDECEDPDACSQICVNYKGYFKCECYPGYEMDTVTKNCKAV--- 582
Query: 460 QDEPASIIFSSTVDIRRIHL 479
+ S+IF++ ++RRI L
Sbjct: 583 AGKSPSLIFTNRHEVRRIDL 602
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSV----RLRCAQINDLLNSWDLPAPEIFPLD-- 105
L+ LA+++ H++ + +S R RC L S DL P +D
Sbjct: 661 LHSPEGLAVDWVHKHIYWTDSGNKTISVATVDGRRRCT-----LFSQDLSEPRAIAVDPL 715
Query: 106 ------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S
Sbjct: 716 RGFMYWSDWGYQAKIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSS 775
Query: 154 VRVDGSHNAVL 164
+ G + +L
Sbjct: 776 IDFSGGNRKML 786
>gi|332809039|ref|XP_003308158.1| PREDICTED: low-density lipoprotein receptor-related protein 8
isoform 2 [Pan troglodytes]
Length = 790
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C Q QC +++CIP W CDE+ DC +D++DED C + C + C
Sbjct: 43 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDEDDCPKKTCADSDFTCD-NGHC 95
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDG 362
I W CD E +C D +DE + +C +L CG +S++CV S CDG
Sbjct: 96 IHERWKCDGEEECP-----DGSDE---SEATCTKQVCPAEKLSCGPTSHKCVPASWRCDG 147
Query: 363 KPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADEC 419
+ DC G DE +C N CSH C+ G C CPAG Q ++ C D DEC
Sbjct: 148 EKDCEGGADEAGCATWLNECLHNNGGCSHICTDLKIGFECACPAGFQLLDQKTCGDIDEC 207
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N + C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 208 KDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 264
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ G A C ++ +C + +C+ CD DC + DE C F+C G
Sbjct: 35 LGGQGPAKECEKDQFQC-RNERCIPSVWRCDEDDDCLDHSDEDDCPKKTCADSDFTCDNG 93
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC 271
CI E WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 94 HCIHERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC 151
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + +L
Sbjct: 391 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKML 448
>gi|440911365|gb|ELR61043.1| hypothetical protein M91_21442, partial [Bos grunniens mutus]
Length = 223
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+C+ L C HKC+ MC+C G + C D DEC I G+C Q+C NT+ SY C
Sbjct: 4 NCQQLNCQHKCAMVRNSTMCYCEDGFEIKEDGRSCKDQDECAIYGTCSQSCVNTYGSYAC 63
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC EGY ++PD +SC A N P D+P ++ +++ I +LNGS
Sbjct: 64 SCVEGYIMQPDNRSCKAKNEPTDKPPLLLIANSETIEIFYLNGS 107
>gi|383864253|ref|XP_003707594.1| PREDICTED: sortilin-related receptor-like [Megachile rotundata]
Length = 2162
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 97/218 (44%), Gaps = 25/218 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C PN+ C ++ C+ S CD DC + DE C P F C KCIP
Sbjct: 1093 ATTCAPNQFAC-RNDVCIPASWRCDRDNDCGDRSDEINCTRVTCDPNNFECDGTKCIPRY 1151
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC +DG+DE N C Q +C + +CI H W CD E DC DN+D
Sbjct: 1152 WVCDIDQDC-KDGTDELNCKYSNCTESQYKCD-NGRCISHRWRCDGEDDCG-----DNSD 1204
Query: 282 E----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
E C + ++ C CIP W CD E DC VD DE N
Sbjct: 1205 EKNCTKSIAPSTCRSDEILCKSEHVCIPTGWKCDGERDC-----VDGLDEA-----DCNK 1254
Query: 338 VLCHPNELRCGSSN---QCVALSKFCDGKPDCSNGEDE 372
++C + C SN +C+ S CDG DC +G DE
Sbjct: 1255 MVCESWQFTCNLSNAKHRCIYNSWVCDGDKDCEDGSDE 1292
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 110/273 (40%), Gaps = 71/273 (26%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C PN C + +C+ CD DC +G DE + CT Q+ C G+CI W
Sbjct: 1133 VTCDPNNFECDGT-KCIPRYWVCDIDQDCKDGTDELNCKYSNCTESQYKCDNGRCISHRW 1191
Query: 223 KCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CDG DC D SDE N C + ++ C CIP W CD E DC VD
Sbjct: 1192 RCDGEDDC-GDNSDEKNCTKSIAPSTCRSDEILCKSEHVCIPTGWKCDGERDC-----VD 1245
Query: 279 NTDEDWDKFHQCFNGQVQCALSK---KCIPHNWLCDEEMDC------------------- 316
DE C + Q C LS +CI ++W+CD + DC
Sbjct: 1246 GLDEADCNKMVCESWQFTCNLSNAKHRCIYNSWVCDGDKDCEDGSDELNCTTTMPPGSLA 1305
Query: 317 ----------------------------STDDIVDNTDE--------DWDK-YFSHNAVL 339
+ DD D++DE +W Y + A +
Sbjct: 1306 PDLPGTPCNHWMFMCNNKKCVPYWWKCDTVDDCGDDSDEIGCGNYEVEWTMPYSTEQAKV 1365
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E +C + +C+ + CDG DC++GEDE
Sbjct: 1366 CQEHEFQC-LNGKCIHDAWVCDGAKDCASGEDE 1397
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 112/274 (40%), Gaps = 69/274 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG----KCIPE 220
C +E+ C S + C+ CDG+ DC +G DE C QF+C + +CI
Sbjct: 1217 CRSDEILCKSEHVCIPTGWKCDGERDCVDGLDEADCNKMVCESWQFTCNLSNAKHRCIYN 1276
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------SKKCIPHNWLCDE 267
SW CDG DC EDGSDE N C G + L +KKC+P+ W CD
Sbjct: 1277 SWVCDGDKDC-EDGSDELN-CTTTMPPGSLAPDLPGTPCNHWMFMCNNKKCVPYWWKCDT 1334
Query: 268 EMDCS--TDDIV-DNTDEDW------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
DC +D+I N + +W ++ C + QC L+ KCI W+CD DC++
Sbjct: 1335 VDDCGDDSDEIGCGNYEVEWTMPYSTEQAKVCQEHEFQC-LNGKCIHDAWVCDGAKDCAS 1393
Query: 319 DD----------------------------------IV---DNTDEDWDKYFSHNAVLCH 341
+ IV D +DE H++
Sbjct: 1394 GEDELRCEGVQVSCRENQFMCRVDGTCIPLSYVCNGIVECPDRSDELGCSREQHSSPAAT 1453
Query: 342 PN---ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P+ L +C L+ +CDG DC +G DE
Sbjct: 1454 PSCYVGLFPCDQTRCFPLAAYCDGNQDCMDGFDE 1487
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 10/86 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCG 213
V C N+ C C+ LS C+G +C + DE P C G F C
Sbjct: 1405 VSCRENQFMCRVDGTCIPLSYVCNGIVECPDRSDELGCSREQHSSPAATPSCYVGLFPCD 1464
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPN 239
+C P + CDG DC+ DG DE N
Sbjct: 1465 QTRCFPLAAYCDGNQDCM-DGFDESN 1489
>gi|119627147|gb|EAX06742.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor, isoform CRA_c [Homo sapiens]
Length = 793
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/240 (33%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+C Q QC +++CIP W CDE+ DC +D++DED C + C + C
Sbjct: 46 ECEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDEDDCPKKTCADSDFTCD-NGHC 98
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDG 362
I W CD E +C D +DE + +C +L CG +S++CV S CDG
Sbjct: 99 IHERWKCDGEEECP-----DGSDE---SEATCTKQVCPAEKLSCGPTSHKCVPASWRCDG 150
Query: 363 KPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADEC 419
+ DC G DE +C N CSH C+ G C CPAG Q ++ C D DEC
Sbjct: 151 EKDCEGGADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDEC 210
Query: 420 LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N + C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 211 KDPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 267
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ G A C ++ +C + +C+ CD DC + DE C F+C G
Sbjct: 38 LGGQGPAKECEKDQFQC-RNERCIPSVWRCDEDDDCLDHSDEDDCPKKTCADSDFTCDNG 96
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC 271
CI E WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 97 HCIHERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC 154
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 394 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 451
>gi|377835501|ref|XP_003688893.1| PREDICTED: low-density lipoprotein receptor-related protein 1-like
[Mus musculus]
Length = 965
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 121/270 (44%), Gaps = 29/270 (10%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
Q +CG KCIP +W C+G +C DG+DE + C + +++C +C+ CD +
Sbjct: 16 QVACGE-KCIPVAWLCNGEQEC-PDGTDELCESLTACPDYKIRCPGKAQCLDAGEPCDAQ 73
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
C D + + + +C GQ QC ++ CI +W CD D D +DE
Sbjct: 74 QSCE-----DGSIKAYCPHIRCLAGQWQCQ-NRACIMDSWRCD-----GIDHCGDASDE- 121
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ C + C S +C+ S C+G+ DC++G DE C N C
Sbjct: 122 ------RDCASCPEGTVSC-DSGKCIPESLMCNGRADCTDGADEPRTCGKNCSLLNGGCE 174
Query: 389 HKCSPTPRGAMCFCPAG--QNPNKTQCVDADEC-LIDGSCDQTCTNTHLSYVCSCTEGYT 445
CS T G C C G P+ C D DEC L G C Q C NT SY C C +G+
Sbjct: 175 GPCSDTHWGVRCSCTPGWQLQPDGWSCGDVDECSLPYGPCGQLCHNTPGSYSCGCIQGHQ 234
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
L +G C D+ I+ ++ ++R
Sbjct: 235 LY-NGTDCRVT----DDDVKILIATDKELR 259
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/275 (29%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 109 EKAGMHGENRSPL----VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+KA + NR L K +++ NQ++ S E V S VL
Sbjct: 714 DKAALVLWNRKTLEPFSTLKEPHIKKMIILAENQEV-----SDPGLKEPVPTTPSLPPVL 768
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMG-KCIPESW 222
C + + C C+ C+G+ DC +G DE C+ C PG F C G +CI E +
Sbjct: 769 CARSSVPCQDGKGCIPRESLCNGEADCQDGSDE-KNCSQICHQPGVFQCLDGSRCIEERY 827
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG C DGSDE + C + + C +CIP +W CD + DC +D DE
Sbjct: 828 HCDGAQHC-SDGSDELD-CWRPADDCSMHCDNKTRCIPKSWRCDGKPDC-----LDRRDE 880
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-----WDKYFSHNA 337
+C + + QC + +CI + CD + DC +D++DE+ W +
Sbjct: 881 QGCFHEKCSSPEFQCE-NGQCISSSLRCDGDRDC-----LDHSDEEGCPVAW-------S 927
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C E++C S +CV CD DC +G DE
Sbjct: 928 LQCPEGEMKCPKSGECVLAEWICDHDVDCKDGTDE 962
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++RC QC+ + CD + C +G + + C GQ+ C CI +SW+C
Sbjct: 50 CPDYKIRCPGKAQCLDAGEPCDAQQSCEDGSIKAYCPHIRCLAGQWQCQNRACIMDSWRC 109
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG C D SDE + C G V C S KCIP + +C+ DC+
Sbjct: 110 DGIDHC-GDASDERDCA--SCPEGTVSCD-SGKCIPESLMCNGRADCT 153
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
+E AGM G +R L + P L +D+ LYW + ++E+V VD S
Sbjct: 384 IETAGMDGSDRKMLAVVTAEEPLGLTLDHVTGRLYWISGYKESIETVNVDSS 435
>gi|1834534|emb|CAA99509.1| apolipoprotein E receptor 2 906 [Homo sapiens]
Length = 699
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 ECEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCEG---- 156
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 157 -GADE---AGCATSLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNEC 211
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C
Sbjct: 212 LHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCE 271
Query: 440 CTEGYTLRPDGKSCTAVNVPQDEPASIIFS--STVDIRRIHLNGS 482
C G + K+C A + S+IF+ ++ + R + N S
Sbjct: 272 CYPGCEMDLLTKNCKAA---AGKSPSLIFTNRTSAEDRPVKRNYS 313
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 434 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 491
>gi|66082554|ref|NP_150643.2| low-density lipoprotein receptor-related protein 8 isoform 2
precursor [Homo sapiens]
Length = 793
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 113/239 (47%), Gaps = 22/239 (9%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C Q QC +++CIP W CDE+ DC +D++DED C + C + CI
Sbjct: 47 CEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDEDDCPKKTCADSDFTCD-NGHCI 99
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFCDGK 363
W CD E +C D +DE + +C +L CG +S++CV S CDG+
Sbjct: 100 HERWKCDGEEECP-----DGSDE---SEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGE 151
Query: 364 PDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECL 420
DC G DE +C N CSH C+ G C CPAG Q ++ C D DEC
Sbjct: 152 KDCEGGADEAGCATWLNECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECK 211
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+C Q C N + C C GY + K+C A + S+IF++ ++RRI L
Sbjct: 212 DPDACSQICVNYKGYFKCECYPGYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 267
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 5/119 (4%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+ G A C ++ +C + +C+ CD DC + DE C F+C G
Sbjct: 38 LGGQGPAKDCEKDQFQC-RNERCIPSVWRCDEDDDCLDHSDEDDCPKKTCADSDFTCDNG 96
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDC 271
CI E WKCDG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 97 HCIHERWKCDGEEEC-PDGSDESEATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDC 154
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 394 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 451
>gi|307192220|gb|EFN75522.1| Sortilin-related receptor [Harpegnathos saltator]
Length = 2187
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 104/222 (46%), Gaps = 34/222 (15%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C N+ C + C+ CDG DC +G DE A C+P F C GKCIP
Sbjct: 1113 ASTCSSNQFAC-LNGVCIPEFWKCDGDNDCGDGSDEQQCNKATCSPNNFECD-GKCIPRY 1170
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------T 273
W CD DC +DG+DE N C + Q +C + +CI H W CD E DC T
Sbjct: 1171 WVCDLDRDC-KDGADERNCTYSNCTDAQFKCD-NGRCISHRWRCDGEDDCRDGSDELNCT 1228
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+++ +T C + ++ C CIP W CD E DC +D +D T
Sbjct: 1229 KNVLPST---------CRSDEIVCPKDHSCIPTAWKCDGEPDC--EDGLDET-------- 1269
Query: 334 SHNAVLCHPNELRCGSS---NQCVALSKFCDGKPDCSNGEDE 372
N ++C + C SS ++C+ S CDG DC++G DE
Sbjct: 1270 GCNNMVCESWQFTCNSSKETHRCIYKSWKCDGDKDCADGSDE 1311
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 97/201 (48%), Gaps = 26/201 (12%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + C+ QF+C G CIPE WKCDG DC DGSDE C +C KC
Sbjct: 1110 PRIASTCSSNQFACLNGVCIPEFWKCDGDNDC-GDGSDEQQCNKATCSPNNFEC--DGKC 1166
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP W+CD + DC D DE + C + Q +C + +CI H W CD E DC
Sbjct: 1167 IPRYWVCDLDRDCK-----DGADERNCTYSNCTDAQFKCD-NGRCISHRWRCDGEDDCR- 1219
Query: 319 DDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D +DE + N + C +E+ C + C+ + CDG+PDC +G DE C
Sbjct: 1220 ----DGSDE---LNCTKNVLPSTCRSDEIVCPKDHSCIPTAWKCDGEPDCEDGLDETG-C 1271
Query: 377 NN------KADCENLKCSHKC 391
NN + C + K +H+C
Sbjct: 1272 NNMVCESWQFTCNSSKETHRC 1292
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 105/237 (44%), Gaps = 40/237 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK----CIPE 220
C +E+ C + C+ + CDG+PDC +G DE N C QF+C K CI +
Sbjct: 1236 CRSDEIVCPKDHSCIPTAWKCDGEPDCEDGLDETGCNNMVCESWQFTCNSSKETHRCIYK 1295
Query: 221 SWKCDGFVDCLEDGSDE--------------PNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
SWKCDG DC DGSDE PN + C + C +KKC+P+ W CD
Sbjct: 1296 SWKCDGDKDC-ADGSDEFNCTTTPNVPTPLMPNLPTNSCNDWMFMCN-NKKCVPYWWKCD 1353
Query: 267 EEMDCSTD-------DIVDNTDEDWDKFHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 315
DC D ++ +D F + C Q QC + CI ++W+CD D
Sbjct: 1354 SVDDCGDDSDEVGCSNVEMTSDTVPPLFTELPRVCREHQFQC-YNGDCIENSWVCDGSKD 1412
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + + D+ + C ++ C CV L+ C+G +C +G DE
Sbjct: 1413 CPSGEDEVRCDQ--------LHMSCQNDQFMCRRDGSCVPLTNICNGIEECPDGSDE 1461
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 111/275 (40%), Gaps = 69/275 (25%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C PN C +C+ CD DC +G DE + CT QF C G+CI
Sbjct: 1151 NKATCSPNNFEC--DGKCIPRYWVCDLDRDCKDGADERNCTYSNCTDAQFKCDNGRCISH 1208
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W+CDG DC DGSDE N C + ++ C CIP W CD E DC +D
Sbjct: 1209 RWRCDGEDDC-RDGSDELNCTKNVLPSTCRSDEIVCPKDHSCIPTAWKCDGEPDC--EDG 1265
Query: 277 VDNTD------EDWD-------KFHQCF------NGQVQCA------------------- 298
+D T E W + H+C +G CA
Sbjct: 1266 LDETGCNNMVCESWQFTCNSSKETHRCIYKSWKCDGDKDCADGSDEFNCTTTPNVPTPLM 1325
Query: 299 ---------------LSKKCIPHNWLCDEEMDCS--TDDI----VDNTDEDWDKYFSHNA 337
+KKC+P+ W CD DC +D++ V+ T + F+
Sbjct: 1326 PNLPTNSCNDWMFMCNNKKCVPYWWKCDSVDDCGDDSDEVGCSNVEMTSDTVPPLFTELP 1385
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ +C + + C+ S CDG DC +GEDE
Sbjct: 1386 RVCREHQFQCYNGD-CIENSWVCDGSKDCPSGEDE 1419
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 152 ESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCN 202
+ VR D H + C ++ C CV L+ C+G +C +G DE P
Sbjct: 1418 DEVRCDQLHMS--CQNDQFMCRRDGSCVPLTNICNGIEECPDGSDELGCLTNHESSPAAG 1475
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
C G F C +C P + CDG DC DG DE N
Sbjct: 1476 PSCLVGLFPCDETRCFPLAAYCDGNQDCF-DGFDESN 1511
>gi|449678423|ref|XP_004209085.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Hydra magnipapillata]
Length = 1463
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 114/271 (42%), Gaps = 29/271 (10%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV---QCALSKKC 258
N C QF C G CIP W+CD DC D SDE N C C + KC
Sbjct: 28 NTTCASNQFQCTSGSCIPLKWRCDSRRDC-NDKSDELN-CPESCDPASYFLCNSTVLPKC 85
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCS 317
IP + CD E DC D +DE +C + + C+ +KKCIP +W CD + +C
Sbjct: 86 IPLKFKCDYERDC-----YDGSDEQNCLSKKCPDENEFMCSTTKKCIPSSWKCDGQFEC- 139
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DD+ D T+ Y+ C+P + QC+ +CDG PDC + DE CN
Sbjct: 140 -DDLSDETNC---TYYKTKPPFCNPENQFICNDGQCINNKWYCDGYPDCFDKSDEPSNCN 195
Query: 378 NKADCENL---KCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADE---CLIDGSCDQTC-- 429
K EN K + KC P +C + N Q DE C+ C
Sbjct: 196 KKKCAENEYSCKLNQKC--IPNAFLCDEKEDCDKNSNQANSDDENPSMCYQSKCENKCEY 253
Query: 430 ---TNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ +C C Y L PD +CT VN
Sbjct: 254 KCQKQPNGVGICLCPSLYKLSPDNHTCTIVN 284
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 140/358 (39%), Gaps = 77/358 (21%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF----SC 212
D S C N+ +C +S C+ L CD + DC++ DE C C P + S
Sbjct: 23 DVSSKNTTCASNQFQC-TSGSCIPLKWRCDSRRDCNDKSDELN-CPESCDPASYFLCNST 80
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
+ KCIP +KCD DC DGSDE N +C + + C+ +KKCIP +W CD + +C
Sbjct: 81 VLPKCIPLKFKCDYERDCY-DGSDEQNCLSKKCPDENEFMCSTTKKCIPSSWKCDGQFEC 139
Query: 272 STDDIVDNTDEDWDKFHQCF---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DD+ D T+ + K F Q C +CI + W CD DC D +DE
Sbjct: 140 --DDLSDETNCTYYKTKPPFCNPENQFICN-DGQCINNKWYCDGYPDC-----FDKSDEP 191
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC------SNGEDEGPF------C 376
+ N C NE C + +C+ + CD K DC +N +DE P C
Sbjct: 192 ----SNCNKKKCAENEYSCKLNQKCIPNAFLCDEKEDCDKNSNQANSDDENPSMCYQSKC 247
Query: 377 NNKAD---------------------------------CENLKCSHKCSPTPRGAMCFC- 402
NK + C+N CS C C C
Sbjct: 248 ENKCEYKCQKQPNGVGICLCPSLYKLSPDNHTCTIVNQCDNNVCSQLCKMVGNDFQCGCF 307
Query: 403 PAGQNPNKTQCV-----DADECLIDGSCDQTC---TNTHLSYVCSCTEGYTLRPDGKS 452
P NKT C D + +D + T H S V S T G L D S
Sbjct: 308 PGHVLENKTDCRYIDSGDIELIYVDIKVIKRYNLRTGLHTSLVTSMTRGVALDYDSNS 365
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 118/303 (38%), Gaps = 104/303 (34%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMGKC 217
++C ++++C N C+ L+ CD + DCS G DE +CN+ QF+C G C
Sbjct: 991 MVCDESKIKCEEDNLCIPLTWRCDREKDCSKGSDEKNCTYPIYCNS---TTQFACQTGGC 1047
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQC---------ALSKKCIPHNWLCDE 267
+ KCDG DC D SDE N + +C + Q QC S CIP W+ D
Sbjct: 1048 LELIHKCDGEFDCF-DKSDEINCALKKCNSITQFQCWSSGIYVSGPPSGPCIPLEWVQDG 1106
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCF------------------------NGQV-------- 295
DC +D +DE C+ NG V
Sbjct: 1107 VNDC-----LDGSDEA-GYITDCYNSSLSSNSSSSSNSSYSSNNCTFNNGSVDIVCDNCL 1160
Query: 296 -----QCALSKKCIPHNWLCDEEMDC---------------------------------- 316
+C S+KCI + +LCD DC
Sbjct: 1161 LDVEFRCVKSQKCISNRFLCDYIKDCDDASDEINCNYTECTAGHFQCQNKHCILLSHRCD 1220
Query: 317 STDDIVDNTDEDWDKYFSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+TDD DN+DE S +++ C E +C +S +C+ ++ C+ DC +DEG
Sbjct: 1221 NTDDCGDNSDE-----VSCGSLVEKTCKDTEWKCQNSTKCIPIASVCNEVNDCPLSDDEG 1275
Query: 374 PFC 376
P C
Sbjct: 1276 PLC 1278
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 118/301 (39%), Gaps = 55/301 (18%)
Query: 107 RLEKAGMHGENRSPLV-TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++ +A + G N LV ++ WP+ L +DY+++ +YW D+ ++ +ES+ DG + V+
Sbjct: 786 KIGRANLDGTNHVILVNLTDLIWPNGLALDYDENKVYWTDAKIDRIESMDFDGRNRVVVI 845
Query: 166 HPNELRCGS-------------SNQCVALSKF----CDGKPDCSNGEDEGPFCNAECTPG 208
+ G S + + K + + +G E N + G
Sbjct: 846 ANTQHSFGLALDDTYIYWTDWLSKEILRAKKNNISDVNVLRNSYSGLMEIQIYNRKVQKG 905
Query: 209 QFSCGMGKCIP-------ESWKCD-GF-VDCLEDGSDEPNTCI--------HQCFNGQVQ 251
C + KC S+ C GF ++DG +C+ + C G
Sbjct: 906 NNICAVAKCEQLCLLRPNNSYICACGFNYTLMKDGK----SCVAGNETWKEYSCREGYFY 961
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
C C ++ CD DC+ + DED C +++C CIP W CD
Sbjct: 962 C--DNLCFRNSSKCDGYKDCTNGE-----DEDSCDNMVCDESKIKCEEDNLCIPLTWRCD 1014
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
E DCS +DE Y + C+ + C+ L CDG+ DC + D
Sbjct: 1015 REKDCSK-----GSDEKNCTY----PIYCNSTTQFACQTGGCLELIHKCDGEFDCFDKSD 1065
Query: 372 E 372
E
Sbjct: 1066 E 1066
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 71/165 (43%), Gaps = 25/165 (15%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDG 234
N C S CDG DC+NGEDE N C + C CIP +W+CD DC G
Sbjct: 964 NLCFRNSSKCDGYKDCTNGEDEDSCDNMVCDESKIKCEEDNLCIPLTWRCDREKDC-SKG 1022
Query: 235 SDEPNTCIHQCF-NGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
SDE N C + + N Q A + C+ CD E DC D +DE +C +
Sbjct: 1023 SDEKN-CTYPIYCNSTTQFACQTGGCLELIHKCDGEFDC-----FDKSDEINCALKKCNS 1076
Query: 293 -GQVQC---------ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
Q QC S CIP W+ D DC +D +DE
Sbjct: 1077 ITQFQCWSSGIYVSGPPSGPCIPLEWVQDGVNDC-----LDGSDE 1116
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 37/59 (62%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+++E+ ++G R ++++ + P + ID+ + +YW D L+T+E R+DG+ +VL
Sbjct: 1387 DKIERMFLNGSGREVIISQGMNSPEGIAIDWVAENIYWSDMRLDTIEVARLDGTMRSVL 1445
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ ++ M G N L T+N WP+ + IDY+ +I+YW D+ + ++S+ +G+ +
Sbjct: 468 KVLRSQMDGTNLQVLATENGGWPNGITIDYSMEIVYWIDARFDYIDSMNYNGTQRRTV 525
>gi|47206272|emb|CAF92386.1| unnamed protein product [Tetraodon nigroviridis]
Length = 573
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 130/296 (43%), Gaps = 46/296 (15%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD--------SHLNT------ 150
D + + M G R + ++IQ +L + +D +YW D +H T
Sbjct: 55 DNHILLSSMDGTQRRKVAYEHIQGVMALTL--FEDFVYWTDGKSKSLRRAHKTTGAQGME 112
Query: 151 -------VESVRVDGS--HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG---EDEG 198
++S++V S V H ++ G + LS K C +
Sbjct: 113 LLNSWQAIKSIKVYHSLRQPEVPKHQCQIANGGCSHLCLLSPGGGHKCACPTNFYLAADN 172
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKK 257
C + CT QF CG +CIP WKCD DC DGSDEP C +C G+ QC
Sbjct: 173 KTCLSNCTSSQFRCGTDECIPFWWKCDTVDDC-GDGSDEPADCPEFKCQPGRFQCGTGLC 231
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+P ++CD E DC DN+DE + + C +GQ +C +KCIP N C+ + DC
Sbjct: 232 ALPP-FICDGENDCG-----DNSDEANCETYICLSGQFKCTRKQKCIPLNLRCNGQNDCG 285
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D D TD C P++ +C +S C++ CD PDC++G DE
Sbjct: 286 --DGEDETD--------CPESTCSPDQFQCKASMHCISKLWVCDEDPDCADGSDEA 331
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ +C +S C++ CD PDC++G DE C P +F C CIP+ W+C
Sbjct: 298 CSPDQFQCKASMHCISKLWVCDEDPDCADGSDEANCDEKTCGPHEFRCENNNCIPDHWRC 357
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D DC D SDE N C + + CA CI + CD + DC +DN+DE
Sbjct: 358 DSQNDC-GDNSDEENCKPVTCNHKEFACA-DGDCISSRFRCDGDYDC-----LDNSDEAS 410
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHP 342
+ +C + Q QC + CI WLCD + DC + D+ VL C
Sbjct: 411 CE-ERCADDQFQCH-NNLCISLKWLCDGQEDCKMGE---------DERNCQGTVLPTCSV 459
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
NE C S CV+ S CDG +C +G DE
Sbjct: 460 NEYVCASGG-CVSASLRCDGHDNCLDGSDE 488
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 105/258 (40%), Gaps = 55/258 (21%)
Query: 156 VDGSHNA----VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
DGS A C P+E RC +N C+ CD + DC + DE C +F+
Sbjct: 325 ADGSDEANCDEKTCGPHEFRC-ENNNCIPDHWRCDSQNDCGDNSDEENCKPVTCNHKEFA 383
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C G CI ++CDG DCL D SDE +C +C + Q QC + CI WLCD + DC
Sbjct: 384 CADGDCISSRFRCDGDYDCL-DNSDEA-SCEERCADDQFQCH-NNLCISLKWLCDGQEDC 440
Query: 272 ST-------------------------------------DDIVDNTDEDWDKFHQCFNGQ 294
D+ +D +DE +C +
Sbjct: 441 KMGEDERNCQGTVLPTCSVNEYVCASGGCVSASLRCDGHDNCLDGSDE-IGCVKECREDE 499
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C CIP W CDE DC +D++DE+ S A C +E C ++ C
Sbjct: 500 FLCLNRAHCIPRRWRCDEVFDC-----MDHSDEE---NCSQGAFFCRADEFICNNT-LCK 550
Query: 355 ALSKFCDGKPDCSNGEDE 372
CDGK DC + DE
Sbjct: 551 LQMWVCDGKDDCGDNSDE 568
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 132/332 (39%), Gaps = 76/332 (22%)
Query: 9 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQS 68
Q QC S CI W+CDE+ DC+ N DE G H E N
Sbjct: 302 QFQCKASMHCISKLWVCDEDPDCADGSDEANCDEK--------TCGPHEFRCENN----- 348
Query: 69 LCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQW 128
N RC ND ++ D EN P+ + ++
Sbjct: 349 -------NCIPDHWRCDSQNDCGDNSDE-------------------ENCKPVTCNHKEF 382
Query: 129 PSSLVIDYNQDIL---YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFC 185
+ + D + + CD + +++ D + C ++ +C +N C++L C
Sbjct: 383 ACA-----DGDCISSRFRCDGDYDCLDNS--DEASCEERCADDQFQC-HNNLCISLKWLC 434
Query: 186 DGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
DG+ DC GEDE C+ ++ C G C+ S +CDG +CL DGSDE C+
Sbjct: 435 DGQEDCKMGEDERNCQGTVLPTCSVNEYVCASGGCVSASLRCDGHDNCL-DGSDEIG-CV 492
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK- 301
+C + C CIP W CDE DC +D++DE+ C G C +
Sbjct: 493 KECREDEFLCLNRAHCIPRRWRCDEVFDC-----MDHSDEE-----NCSQGAFFCRADEF 542
Query: 302 -----KCIPHNWLCDEEMDCSTDDIVDNTDED 328
C W+CD + DC DN+DED
Sbjct: 543 ICNNTLCKLQMWVCDGKDDCG-----DNSDED 569
>gi|47224917|emb|CAG06487.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3050
Score = 91.7 bits (226), Expect = 8e-16, Method: Composition-based stats.
Identities = 73/241 (30%), Positives = 102/241 (42%), Gaps = 36/241 (14%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P N+ RC +S CV L+ CD + DC + DE + +C PG+F+C G C+ E+W+
Sbjct: 1858 CDPSNQFRCVASGSCVPLAFKCDHEDDCGDNSDEEHCESHQCGPGEFTCARGVCVREAWR 1917
Query: 224 CDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC D SDE N H C QC + CIP W+CD + DC
Sbjct: 1918 CDGDNDC-RDWSDEANCTAGHHTCEANSFQCH-TGHCIPQRWMCDGDDDCQDGSD----- 1970
Query: 282 EDWDKFHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
++ C Q L + C+P C+ +C N + +Y
Sbjct: 1971 ---EELRYCEGPQCHGFLCSNHTCLPATAHCNGVQECPDGADEQNCEPLCTRYM------ 2021
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
E C + QC+ S CDG C +G DE D E C+ P+ G +
Sbjct: 2022 ----EFVCRNRAQCLFRSLVCDGIKHCEDGSDE--------DAEYAGCA---VPSEFGKV 2066
Query: 400 C 400
C
Sbjct: 2067 C 2067
Score = 82.4 bits (202), Expect = 5e-13, Method: Composition-based stats.
Identities = 72/237 (30%), Positives = 97/237 (40%), Gaps = 33/237 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF-NGQVQCALSKKCIPHNW 263
C P Q+ C G+CI WKCD DC D SDE C + Q +C S C+P +
Sbjct: 1819 CLPNQYRCSNGRCISSIWKCDSDNDC-GDMSDEQECPTTTCDPSNQFRCVASGSCVPLAF 1877
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE+ + HQC G+ CA C+ W CD + DC D
Sbjct: 1878 KCDHEDDCG-----DNSDEEHCESHQCGPGEFTCA-RGVCVREAWRCDGDNDCR-----D 1926
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+DE H C N +C + + ++E +C C
Sbjct: 1927 WSDEANCTAGHHT---CEANSFQCHTGHCIPQRWMCDGDDDCQDGSDEELRYCEG-PQCH 1982
Query: 384 NLKCS-HKCSPTPRGAMCFCPAGQNPNKTQCVD-ADECLIDGSCDQTCTNTHLSYVC 438
CS H C P A C Q +C D ADE +C+ CT ++ +VC
Sbjct: 1983 GFLCSNHTCLP----ATAHCNGVQ-----ECPDGADE----QNCEPLCTR-YMEFVC 2025
Score = 73.9 bits (180), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 81/218 (37%), Gaps = 36/218 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------GPFCNAECTPGQFSCGMG 215
E C + QC+ S CDG C +G DE G C+A F C G
Sbjct: 2022 EFVCRNRAQCLFRSLVCDGIKHCEDGSDEDAEYAGCAVPSEFGKVCDAY----TFQCANG 2077
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
C+ WKCDG DC D SDE N + + ++ + D
Sbjct: 2078 VCVSLEWKCDGMDDC-GDYSDEANCGREPRQRHRRRAQPARSSDAAQSVAAAPTD----- 2131
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDKYFS 334
V + ++C NG +CIP W CD E DC D T +
Sbjct: 2132 -VPGCSRYFQ--YECKNG--------RCIPTWWKCDGENDCGDWSDETQCTGGATPHTAA 2180
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C PN RCGS CV S CDG DC +G DE
Sbjct: 2181 PGPSTCAPNRFRCGSG-ACVVDSWVCDGYADCPDGSDE 2217
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 46/160 (28%), Positives = 64/160 (40%), Gaps = 49/160 (30%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------------PFCNAECT-- 206
+C +C ++ CV+L CDG DC + DE P +++
Sbjct: 2066 VCDAYTFQC-ANGVCVSLEWKCDGMDDCGDYSDEANCGREPRQRHRRRAQPARSSDAAQS 2124
Query: 207 --------PG-----QFSCGMGKCIPESWKCDGFVDCLEDGSDE--------PNTCI--- 242
PG Q+ C G+CIP WKCDG DC D SDE P+T
Sbjct: 2125 VAAAPTDVPGCSRYFQYECKNGRCIPTWWKCDGENDC-GDWSDETQCTGGATPHTAAPGP 2183
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C + +C S C+ +W+CD DC D +DE
Sbjct: 2184 STCAPNRFRCG-SGACVVDSWVCDGYADCP-----DGSDE 2217
>gi|260795504|ref|XP_002592745.1| hypothetical protein BRAFLDRAFT_67185 [Branchiostoma floridae]
gi|229277968|gb|EEN48756.1| hypothetical protein BRAFLDRAFT_67185 [Branchiostoma floridae]
Length = 1607
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 159/376 (42%), Gaps = 59/376 (15%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFKRILNGTHTLALEFNHRNQ 67
+C S KC+ H+ +CD DC+ D +DE+ W + +I T F N
Sbjct: 371 FKCESSGKCVRHDQICDGASDCA-----DGSDEEDCWSRECPQIPGFPQT----FFRCNG 421
Query: 68 SLCFIQQQNVSSVRLRCAQINDLLNSWDLPAP-EIFPLDERLEKAGMHGENRSPLVTKNI 126
+ + + NV + C +D + W P F R E +G
Sbjct: 422 TGGCVPEWNVCNGETDCTDGSDEEDCWSKECPLSFFGTFFRCESSG-------------- 467
Query: 127 QWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCD 186
+ V ++ CDS+ + + +P++ +C SS +CV CD
Sbjct: 468 ----ACVYEF-----VVCDSNADCTDGSDEKDCSGGECPNPDDFKCESSGRCVDAYNICD 518
Query: 187 GKPDCSNGEDEGPFCNAEC--TPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDE----PN 239
G +C++G DE +C +E P F C G C+PE C+G+ +C DGSDE
Sbjct: 519 GNANCADGSDE-RYCMSEGCPDPSYFKCESSGTCVPEYHICNGYAEC-PDGSDEHDCWSK 576
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
C G +C S C+P + CD D+ D +DE +CF+ Q QC
Sbjct: 577 ECHFSAHFGIFRCESSGACVPEVFTCD-----GYDNCPDLSDERDCMDKECFSDQFQC-R 630
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S C+ +CD+ DC D +DE+ W+K +L RC SS CV S
Sbjct: 631 SGICVSKLDVCDDNADCD-----DGSDEEDCWNKECPQ--LLPADELFRCESSGACVTPS 683
Query: 358 KFCDGKPDCSNGEDEG 373
+ C+G DC++G DEG
Sbjct: 684 QMCNGVNDCADGSDEG 699
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 27/219 (12%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPG----QFSC-GMGKCI 218
P++ +C SS +CV + CDG DC++G DE + EC PG F C G G C+
Sbjct: 367 EPDDFKCESSGKCVRHDQICDGASDCADGSDEEDCWSRECPQIPGFPQTFFRCNGTGGCV 426
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQC----FNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
PE C+G DC DGSDE + +C F +C S C+ +CD DC+
Sbjct: 427 PEWNVCNGETDCT-DGSDEEDCWSKECPLSFFGTFFRCESSGACVYEFVVCDSNADCT-- 483
Query: 275 DIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE +C N +C S +C+ +CD +C+ D +DE +
Sbjct: 484 ---DGSDEKDCSGGECPNPDDFKCESSGRCVDAYNICDGNANCA-----DGSDE----RY 531
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ P+ +C SS CV C+G +C +G DE
Sbjct: 532 CMSEGCPDPSYFKCESSGTCVPEYHICNGYAECPDGSDE 570
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 107/246 (43%), Gaps = 31/246 (12%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNE-----LRCGSSNQCVALSKFCDGKPDCSNG 194
+L+ C L +VE V + + + C E RCGSS CV + CDG+ DCS+G
Sbjct: 6 LLFMC---LMSVEYVALQSTDGGIECTAFESEYELFRCGSSGTCVLPQEVCDGRNDCSDG 62
Query: 195 EDEGPFCNAEC---TPGQFSC---GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FN 247
DE + EC +P G C+ E C+G+ DC DGSDE + +C
Sbjct: 63 SDEEDCWSKECPQSSPFDVPVRCESSGACVSEWETCNGYDDC-PDGSDEKDCSGKECPIP 121
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPH 306
G +C S C+ C+ DD D +DE +C G +C S C+
Sbjct: 122 GDFRCVSSGACVRGWDTCN-----GVDDCPDGSDERDCSGEECPIPGDFRCESSGACVRG 176
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
C+ DD D +DE +P++ +C SS C++ K C+G DC
Sbjct: 177 WDTCN-----GFDDCPDGSDE----RDCSGGECPNPDDFKCASSGACISEWKACNGVDDC 227
Query: 367 SNGEDE 372
+G DE
Sbjct: 228 PDGSDE 233
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 113/268 (42%), Gaps = 43/268 (16%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF---SCGMGKCIPESWKCDG 226
RC SS CV S+ C+G DC++G DEG + N +C F + G C+ +CDG
Sbjct: 671 FRCESSGACVTPSQMCNGVNDCADGSDEGCW-NEDCPYADFFKCAGGGKTCVHPQKRCDG 729
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--W 284
DC +DGSDE N + +C C + C+ CD DCS D +DE W
Sbjct: 730 LTDC-QDGSDE-NCVVTECPINDFICKNYEACVNREQQCDGHEDCS-----DGSDEGECW 782
Query: 285 DKFHQCF-NGQVQCALSKKCIPHNW-LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
DK +C + +C S KC+ CD +DC + + D +DE + +C
Sbjct: 783 DK--ECLLSDSFKCKSSGKCVNETTNRCDGVVDCHREGVHDESDE--------SGCVCTS 832
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
E RC N CV S C+G PD C + C + C
Sbjct: 833 VEFRC--ENSCVEPSGVCNGFPD----------------CGDSSDELLCQSCEEKGLWQC 874
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCT 430
+G+ N D D+ G+ ++ C+
Sbjct: 875 DSGECINNASVCDGDKDCSSGTDEENCS 902
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC---TPGQFSC-GMGKCIPES 221
+P+ RC SS CV+ K C+ DC++G DE EC Q C G C+
Sbjct: 243 NPSYFRCKSSGICVSGFKICNAVADCTDGSDEEDCWRKECHFQLGSQVRCESSGACVSAW 302
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
C+G DC DGSDE + +CF+ + C+ +CD + DC+ D +D
Sbjct: 303 DTCNGIDDC-PDGSDERDCMEKECFHDLLFKCTDGICVAKLGVCDGDADCT-----DGSD 356
Query: 282 EDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAV 338
E+ +C +C S KC+ H+ +CD DC+ D +DE+ W + +
Sbjct: 357 EEDCLRVECPEPDDFKCESSGKCVRHDQICDGASDCA-----DGSDEEDCWSRECPQ--I 409
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P RC + CV C+G+ DC++G DE
Sbjct: 410 PGFPQTFFRCNGTGGCVPEWNVCNGETDCTDGSDE 444
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
H RC SS CV CDG +C + DE + EC QF C G C+ + CD
Sbjct: 583 HFGIFRCESSGACVPEVFTCDGYDNCPDLSDERDCMDKECFSDQFQCRSGICVSKLDVCD 642
Query: 226 GFVDCLEDGSDEPNTCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVD 278
DC +DGSDE + +C + +C S C+ + +C+ DC+ +D+
Sbjct: 643 DNADC-DDGSDEEDCWNKECPQLLPADELFRCESSGACVTPSQMCNGVNDCADGSDEGCW 701
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
N D + F +C G K C+ CD DC D +DE N V
Sbjct: 702 NEDCPYADFFKCAGG------GKTCVHPQKRCDGLTDCQ-----DGSDE--------NCV 742
Query: 339 L--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ C N+ C + CV + CDG DCS+G DEG
Sbjct: 743 VTECPINDFICKNYEACVNREQQCDGHEDCSDGSDEG 779
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 106/214 (49%), Gaps = 30/214 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESW 222
C N+ C + CV + CDG DCS+G DEG + EC F C GKC+ E+
Sbjct: 746 CPINDFICKNYEACVNREQQCDGHEDCSDGSDEGECWDKECLLSDSFKCKSSGKCVNETT 805
Query: 223 -KCDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVD 278
+CDG VDC +G DE + C + + +C S C+ + +C+ DC S+D+++
Sbjct: 806 NRCDGVVDCHREGVHDESDESGCVCTSVEFRCENS--CVEPSGVCNGFPDCGDSSDELLC 863
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ E+ G QC S +CI + +CD + DCS+ TDE+ + +
Sbjct: 864 QSCEE--------KGLWQCD-SGECINNASVCDGDKDCSS-----GTDEE------NCSA 903
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ +L C C+ + CDG DC+NGEDE
Sbjct: 904 PCNGLQLEC--DGGCLPKYRACDGLVDCANGEDE 935
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 87/208 (41%), Gaps = 38/208 (18%)
Query: 183 KFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--- 237
+ CDG DCS G+DE C EC G C+P SW CD DC+ DG DE
Sbjct: 1332 QACDGVEDCSTGKDEENCNDCALECQTG-----FSSCVPSSWICDEIEDCV-DGKDEQGC 1385
Query: 238 ----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDEDWDK-FHQC 290
P C C N + C+P L D DCS D+I N ++ + + C
Sbjct: 1386 VKGVPKRCFFTCRN-------NVTCLPSRQLGDGHHDCSYGEDEIPSNVEDAVRRLWGSC 1438
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDD------IVDNTDEDWDKYFSHNAVLCHPNE 344
+ C+P ++CD + DC ++ +V+ D + V C
Sbjct: 1439 RFNCPAVYGNASCVPDAFVCDGDADCLGEEDEQGCSVVEERQND-----DCDTVSCDTPG 1493
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
GS CV CDG P+C++GEDE
Sbjct: 1494 NAMGS--ICVPSYWVCDGYPNCASGEDE 1519
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N L+ C+ + CDG DC+NGEDE C QF C G C+ ES CD
Sbjct: 906 NGLQLECDGGCLPKYRACDGLVDCANGEDEINCTFRGCDANQFPCADGTCLLESQLCDNL 965
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
DC G ++ C L+ + IP ++
Sbjct: 966 TDC--SGGEDEEDCGGNVPPPGFSLGLASRYIPDVFI 1000
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 17/121 (14%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSC----GMGKCIPE 220
C ++ C+ + DG DCS GEDE P + +F+C G C+P+
Sbjct: 1395 FTCRNNVTCLPSRQLGDGHHDCSYGEDEIPSNVEDAVRRLWGSCRFNCPAVYGNASCVPD 1454
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFN---GQVQC-----ALSKKCIPHNWLCDEEMDCS 272
++ CDG DCL + ++ + + + N V C A+ C+P W+CD +C+
Sbjct: 1455 AFVCDGDADCLGEEDEQGCSVVEERQNDDCDTVSCDTPGNAMGSICVPSYWVCDGYPNCA 1514
Query: 273 T 273
+
Sbjct: 1515 S 1515
>gi|260833839|ref|XP_002611919.1| hypothetical protein BRAFLDRAFT_106515 [Branchiostoma floridae]
gi|229297292|gb|EEN67928.1| hypothetical protein BRAFLDRAFT_106515 [Branchiostoma floridae]
Length = 1615
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 113/236 (47%), Gaps = 21/236 (8%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+ CD + + V+ +G P+ L+C SS CV+ K CDG DC G DE
Sbjct: 186 WQCDGNDDCVDGSDEEGCLTKECYDPDYLKCESSGVCVSPQKQCDGNDDCKEGLDEEDCL 245
Query: 202 NAECT-PGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-QCALSKKC 258
EC P C G C+ W+CDG VDC EDGSDE N I C + +V QC S C
Sbjct: 246 AKECYDPEYLKCESSGVCVAPWWQCDGNVDC-EDGSDEENCAIESCDHPEVFQCKRSDVC 304
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCS 317
+ W CD E DC D +DE+ C++ + QC S C+P C+
Sbjct: 305 VTPEWQCDGEDDCE-----DGSDEENCTAKACYDPEDFQCVSSGVCVPPWEQCN-----G 354
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD D +DE + ++ C+ P + +C SS CV + CDG+ DC +G DE
Sbjct: 355 WDDCPDGSDEK-----NCTSLECYSPEDFKCESSGVCVDPWQQCDGEDDCEDGSDE 405
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 99/211 (46%), Gaps = 22/211 (10%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWK 223
P +C SS CV K CDGK DC +G DE + EC P F C G C+ W+
Sbjct: 575 RPQYFKCNSSGTCVRPEKQCDGKEDCDDGGDEENCTSKECLRPDYFKCESNGVCVRPEWQ 634
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG D ED SDE N C++ + QC S C+P CD DD D +DE
Sbjct: 635 CDG-EDFCEDRSDEENCTAKACYDPEDFQCVSSGVCVPPWEQCD-----GWDDCPDGSDE 688
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH- 341
+C+N + +C S C+ CD DD D +DE+ N +C
Sbjct: 689 KNCTSIECYNNRFKCESSGVCLLPKSECD-----GVDDCGDGSDEE-------NCTVCPL 736
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P+ +C S ++CV L + CDG +C +G DE
Sbjct: 737 PDYFKCTSGSKCVPLIQQCDGDGNCEDGSDE 767
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 127/282 (45%), Gaps = 32/282 (11%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC 212
VR D + V + +CGS +QCV CDG DC +G DE + EC P F C
Sbjct: 116 VRPDEKNCTVCPLADYFKCGSVSQCVPPEWQCDGMNDCPDGSDEENCASKECFNPEDFKC 175
Query: 213 GMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMD 270
+ C+P W+CDG DC+ DGSDE +C++ ++C S C+ CD
Sbjct: 176 ESSRICVPPEWQCDGNDDCV-DGSDEEGCLTKECYDPDYLKCESSGVCVSPQKQCD---- 230
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DD + DE+ +C++ + ++C S C+ W CD +DC D +DE+
Sbjct: 231 -GNDDCKEGLDEEDCLAKECYDPEYLKCESSGVCVAPWWQCDGNVDCE-----DGSDEEN 284
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH 389
S + HP +C S+ CV CDG+ DC +G DE EN C+
Sbjct: 285 CAIESCD----HPEVFQCKRSDVCVTPEWQCDGEDDCEDGSDE----------EN--CTA 328
Query: 390 KCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
K P C P QC D+C DGS ++ CT+
Sbjct: 329 KACYDPEDFQCVSSGVCVPPWEQCNGWDDC-PDGSDEKNCTS 369
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 98/226 (43%), Gaps = 44/226 (19%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAEC---------TPG-----------------Q 209
+C +L+ CDG C++G DE N EC T G
Sbjct: 72 GRCHSLAAVCDGMSHCADGSDEEDCLNKECPLPNYVKCETTGICVRPDEKNCTVCPLADY 131
Query: 210 FSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDE 267
F CG + +C+P W+CDG DC DGSDE N +CFN + +C S+ C+P W CD
Sbjct: 132 FKCGSVSQCVPPEWQCDGMNDC-PDGSDEENCASKECFNPEDFKCESSRICVPPEWQCD- 189
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DD VD +DE+ +C++ ++C S C+ CD DC
Sbjct: 190 ----GNDDCVDGSDEEGCLTKECYDPDYLKCESSGVCVSPQKQCDGNDDCK--------- 236
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E D+ P L+C SS CVA CDG DC +G DE
Sbjct: 237 EGLDEEDCLAKECYDPEYLKCESSGVCVAPWWQCDGNVDCEDGSDE 282
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 103/251 (41%), Gaps = 50/251 (19%)
Query: 157 DGS--HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT-PGQFSC 212
DGS N +C P+ +C S ++CV L + CDG +C +G DE EC P F C
Sbjct: 724 DGSDEENCTVCPLPDYFKCTSGSKCVPLIQQCDGDGNCEDGSDEENCTAKECYDPDYFKC 783
Query: 213 -GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G CI +CD C +DGSDE N +C + +V+C S C P CD DC
Sbjct: 784 VSSGVCIHPDRQCDTGEHC-QDGSDEENCSSKKCDSDKVRCVTSGACFPKLKRCDGRHDC 842
Query: 272 -------------STDDIVDNTDEDW--DKFHQCFNGQVQ-------CALSK-------K 302
+ D + + DW D C +G + C L K
Sbjct: 843 PDGSDEEYCREECTIPDYLSHVIPDWQCDGVDDCRDGSDERNCTADDCPLPKFFCEPEGP 902
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS-HNAVLCHPNELRCGSSNQCVALSKFCD 361
C+P CD DC +Y S +C E RC S+ CVA S CD
Sbjct: 903 CLPDTRRCDGVGDC--------------RYGSDERGCVCSSVEFRCEGSSTCVAPSGVCD 948
Query: 362 GKPDCSNGEDE 372
G PDC + DE
Sbjct: 949 GVPDCDDASDE 959
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 104/252 (41%), Gaps = 48/252 (19%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207
L ++ VR D C + C +S+ C+ ++ CD +C +G DE +P
Sbjct: 11 LLSIGHVRTDEG-----CPSSAFACKTSDDCIDWAERCDWSINCPDGSDEECTAPDCLSP 65
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC---------------------- 245
G FSC G+C + CDG C DGSDE + +C
Sbjct: 66 GVFSCD-GRCHSLAAVCDGMSHCA-DGSDEEDCLNKECPLPNYVKCETTGICVRPDEKNC 123
Query: 246 ----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ-VQCALS 300
+C +C+P W CD DC D +DE+ +CFN + +C S
Sbjct: 124 TVCPLADYFKCGSVSQCVPPEWQCDGMNDCP-----DGSDEENCASKECFNPEDFKCESS 178
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+ C+P W CD DD VD +DE+ P+ L+C SS CV+ K C
Sbjct: 179 RICVPPEWQCD-----GNDDCVDGSDEE----GCLTKECYDPDYLKCESSGVCVSPQKQC 229
Query: 361 DGKPDCSNGEDE 372
DG DC G DE
Sbjct: 230 DGNDDCKEGLDE 241
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 157/409 (38%), Gaps = 69/409 (16%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSL 69
QC S C+P CD DD D +DE + F + +
Sbjct: 661 FQCVSSGVCVPPWEQCD-----GWDDCPDGSDE-------KNCTSIECYNNRFKCESSGV 708
Query: 70 CFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIF---------PLDERLEKAG--MHGENR 118
C + + V C +D N P P+ F PL ++ + G G +
Sbjct: 709 CLLPKSECDGVD-DCGDGSDEENCTVCPLPDYFKCTSGSKCVPLIQQCDGDGNCEDGSDE 767
Query: 119 SPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH----NAVLCHPNELRCGS 174
K P + + D +T E + DGS ++ C +++RC +
Sbjct: 768 ENCTAKECYDPDYFKC-VSSGVCIHPDRQCDTGEHCQ-DGSDEENCSSKKCDSDKVRCVT 825
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S C K CDG+ DC +G DE +C ECT + + IP+ W+CDG DC DG
Sbjct: 826 SGACFPKLKRCDGRHDCPDGSDE-EYCREECTIPDY---LSHVIPD-WQCDGVDDC-RDG 879
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE N C + C C+P CD DC +DE + C + +
Sbjct: 880 SDERNCTADDCPLPKFFCEPEGPCLPDTRRCDGVGDCRY-----GSDE---RGCVCSSVE 931
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH----PNELRCGSS 350
+C S C+ + +CD DC D +DE +LC + +C
Sbjct: 932 FRCEGSSTCVAPSGVCDGVPDCD-----DASDE----------LLCQSCAEKGQWQC-DG 975
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRG 397
+C+ + CDG DCS+GEDE N A C L+ C C P R
Sbjct: 976 GECITNASVCDGDRDCSSGEDEE---NCPAPCNGLQLECDGGCLPKYRA 1021
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 91/208 (43%), Gaps = 17/208 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKC 224
PN +C S ++C+ + CD +C +G DE + EC PG F C G G C+P W+C
Sbjct: 414 PNYFKCKSGSKCIFSRRQCDSVYNCEDGSDEDNCTSKECYRPGSFRCDGTGACVPPLWQC 473
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG VD DGSDE N C +C + C P CD + DC+ D +DE+
Sbjct: 474 DG-VDNCGDGSDEEN-CQECNSPNSFKCEGNAACFPLWEQCDGDRDCA-----DGSDEE- 525
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C + + S KC N +C D D + S P
Sbjct: 526 ----NCISKECYIPDSIKC-ESNGICVSPQRQCDGDDDCLDGADEENCTSKECF--RPQY 578
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C SS CV K CDGK DC +G DE
Sbjct: 579 FKCNSSGTCVRPEKQCDGKEDCDDGGDE 606
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 73/169 (43%), Gaps = 11/169 (6%)
Query: 149 NTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG 208
+ V R +C E RC S+ CVA S CDG PDC + DE C + G
Sbjct: 911 DGVGDCRYGSDERGCVCSSVEFRCEGSSTCVAPSGVCDGVPDCDDASDE-LLCQSCAEKG 969
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
Q+ C G+CI + CDG DC G DE N C C Q++C C+P CD
Sbjct: 970 QWQCDGGECITNASVCDGDRDC-SSGEDEEN-CPAPCNGLQLEC--DGGCLPKYRACDGL 1025
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
DCS + DE C Q CA C+ + LCD DCS
Sbjct: 1026 GDCS-----NGQDEINCTAGGCGADQFPCA-DGTCLLESQLCDNLTDCS 1068
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 95/251 (37%), Gaps = 61/251 (24%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--------------------- 205
PN +C + C L + CDG DC++G DE + EC
Sbjct: 494 PNSFKCEGNAACFPLWEQCDGDRDCADGSDEENCISKECYIPDSIKCESNGICVSPQRQC 553
Query: 206 ---------------------TPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
P F C G C+ +CDG DC +DG DE N
Sbjct: 554 DGDDDCLDGADEENCTSKECFRPQYFKCNSSGTCVRPEKQCDGKEDC-DDGGDEENCTSK 612
Query: 244 QCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ-VQCALSK 301
+C +C + C+ W CD E C D +DE+ C++ + QC S
Sbjct: 613 ECLRPDYFKCESNGVCVRPEWQCDGEDFCE-----DRSDEENCTAKACYDPEDFQCVSSG 667
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
C+P CD DD D +DE + ++ C+ N +C SS C+ CD
Sbjct: 668 VCVPPWEQCD-----GWDDCPDGSDEK-----NCTSIECYNNRFKCESSGVCLLPKSECD 717
Query: 362 GKPDCSNGEDE 372
G DC +G DE
Sbjct: 718 GVDDCGDGSDE 728
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 84/200 (42%), Gaps = 23/200 (11%)
Query: 182 SKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
S CDG DCS GEDE C EC G CI W CD DCL DG DE
Sbjct: 1423 SLACDGTEDCSTGEDEASCDECAMECLTGSSD----PCISRGWICDEINDCL-DGKDE-E 1476
Query: 240 TCIH----QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW---DKFHQCFN 292
C+ CF C S C+P L D DC+ + +D + ++ C
Sbjct: 1477 GCVQGVPKHCF---FTCRHSVTCLPSRQLGDGRQDCADGEDERPSDVEAALERRWGSCSY 1533
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN- 351
+ C+P + CD + DC ++ +++ + +H L L GS +
Sbjct: 1534 SCPSVHGNASCVPDAFSCDGDADCLEEEDEQGCEDNIQR--THPECLTFYCSLP-GSPDF 1590
Query: 352 -QCVALSKFCDGKPDCSNGE 370
CV + CDG PDC++GE
Sbjct: 1591 FYCVHSNVICDGYPDCASGE 1610
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N L+ C+ + CDG DCSNG+DE C QF C G C+ ES CD
Sbjct: 1005 NGLQLECDGGCLPKYRACDGLGDCSNGQDEINCTAGGCGADQFPCADGTCLLESQLCDNL 1064
Query: 228 VDCLEDGSDE 237
DC G DE
Sbjct: 1065 TDC-SGGEDE 1073
>gi|405970947|gb|EKC35809.1| Sortilin-related receptor [Crassostrea gigas]
Length = 2085
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 103/201 (51%), Gaps = 19/201 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C+ + CD DC +G DE EC+ G F C G CIP+ W+CD DC +D
Sbjct: 1072 SNGRCIPATWLCDRDDDCRDGSDEFDCPYLECSTGHFQCKSGACIPDRWRCDHDNDC-DD 1130
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ-CFN 292
GSDE N +C + Q C +K+CIP NW CD + DC DN+DE +++ C
Sbjct: 1131 GSDEENCDYAKCTSAQFSCD-NKRCIPRNWTCDYDDDCH-----DNSDEKNCHYNETCSP 1184
Query: 293 GQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+ CA + KC+P +CD DC VD +DE N C + C N
Sbjct: 1185 EEFHCAKHQPKCVPMTTVCDGHNDC-----VDGSDE-----VRCNTTSCPSYKWACADRN 1234
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
QC+ S CDG+ DC++G DE
Sbjct: 1235 QCIYNSWRCDGEEDCNDGSDE 1255
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 102/242 (42%), Gaps = 37/242 (15%)
Query: 160 HNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKC 217
H C P E C +CV ++ CDG DC +G DE C +++C +C
Sbjct: 1177 HYNETCSPEEFHCAKHQPKCVPMTTVCDGHNDCVDGSDEVRCNTTSCPSYKWACADRNQC 1236
Query: 218 IPESWKCDGFVDCLEDGSDEPN-----TCIHQCFNG-----------QVQCALSKKCIPH 261
I SW+CDG DC DGSDE N + FN +++C+ + C +
Sbjct: 1237 IYNSWRCDGEEDC-NDGSDEKNCTTTNSTTAIPFNTTTLGPSTSPFCELRCSDMRSCYGY 1295
Query: 262 NWLCDEEMDC--STDDI-----VDNTDEDWDKFHQCFNGQVQC----ALSKKCIPHNWLC 310
+ CD +DC S+D+I T H C Q C + +CIP W+C
Sbjct: 1296 SQRCDGIVDCWDSSDEIFCPGDTSTTPATTKLPHGCSENQFYCYRGHTVYPQCIPQTWVC 1355
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC ED D + C N+ RC + CV SK CDGK DC +
Sbjct: 1356 DNTSDCENG-------EDEDSSVCKDVEHCASNDFRCLYMDGCVPRSKVCDGKFDCLDAS 1408
Query: 371 DE 372
DE
Sbjct: 1409 DE 1410
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 18/173 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
++ C+ F+C G+CIP +W D DGSDE + +C G QC S CIP
Sbjct: 1060 VDSNCSHSHFTCSNGRCIPATW-LCDRDDDCRDGSDEFDCPYLECSTGHFQCK-SGACIP 1117
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD + DC D +DE+ + +C + Q C +K+CIP NW CD + DC
Sbjct: 1118 DRWRCDHDNDCD-----DGSDEENCDYAKCTSAQFSCD-NKRCIPRNWTCDYDDDCH--- 1168
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE 372
DN+DE H C P E C +CV ++ CDG DC +G DE
Sbjct: 1169 --DNSDEK----NCHYNETCSPEEFHCAKHQPKCVPMTTVCDGHNDCVDGSDE 1215
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 105/268 (39%), Gaps = 55/268 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +C S C+ CD DC +G DE A+CT QFSC +CIP +W C
Sbjct: 1103 CSTGHFQC-KSGACIPDRWRCDHDNDCDDGSDEENCDYAKCTSAQFSCDNKRCIPRNWTC 1161
Query: 225 DGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDE 282
D DC D SDE N ++ C + CA + KC+P +CD DC VD +DE
Sbjct: 1162 DYDDDC-HDNSDEKNCHYNETCSPEEFHCAKHQPKCVPMTTVCDGHNDC-----VDGSDE 1215
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN-TDEDWDKYFSHNAVLCH 341
C + + CA +CI ++W CD E DC+ N T + N
Sbjct: 1216 VRCNTTSCPSYKWACADRNQCIYNSWRCDGEEDCNDGSDEKNCTTTNSTTAIPFNTTTLG 1275
Query: 342 PN-----ELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GP------------- 374
P+ ELRC C S+ CDG DC + DE P
Sbjct: 1276 PSTSPFCELRCSDMRSCYGYSQRCDGIVDCWDSSDEIFCPGDTSTTPATTKLPHGCSENQ 1335
Query: 375 ------------------FCNNKADCEN 384
C+N +DCEN
Sbjct: 1336 FYCYRGHTVYPQCIPQTWVCDNTSDCEN 1363
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 16/129 (12%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L +LA +++ +N + + R +L NS L P LD R
Sbjct: 794 LRSIESLAFDWSSKNLYWVDAGARKIEVAREDGRYRKELFNSTYLDRPRALVLDPRFGYM 853
Query: 108 -----------LEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
+ +A M G + +V+ + WP+ + ID+ D +YW D++ + + S
Sbjct: 854 YWTDWSASHPRIVRAWMDGTHNETIVSGYRVHWPNGITIDFRSDKIYWTDAYKHGIYSAN 913
Query: 156 VDGSHNAVL 164
DG H VL
Sbjct: 914 SDGQHVQVL 922
>gi|432854680|ref|XP_004068020.1| PREDICTED: very low-density lipoprotein receptor-like [Oryzias
latipes]
Length = 633
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 108/234 (46%), Gaps = 23/234 (9%)
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
S +CI LC+ DD D +DED C +G C S C+ + +CD
Sbjct: 49 SSRCISTKLLCN-----GVDDCGDGSDED--SCQNCTSGLFSCGPSDACLLKDKVCDGRA 101
Query: 315 DCSTDDIVDNTDEDW-----DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
DC+ + DE W D+ + A C P+E +CG+ +C+ CD PDCS+G
Sbjct: 102 DCT-----NKRDESWELCGSDQPAAQTAPTCPPSEFQCGN-GECIRHVWRCDNTPDCSDG 155
Query: 370 EDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQT 428
DE N+ N CSH C P G +C CP + + C + D CL CDQ
Sbjct: 156 SDEEDCNQNECLVNNGGCSHHCVDLPMGFLCQCPDNMKLVDDSLCEEVDVCLERDVCDQL 215
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C ++ S C C EGY RP G + A DE A ++ +++ I+ + L G+
Sbjct: 216 CVHSSHSITCDCHEGY--RP-GSTTGACTAGGDE-AQLVLTTSKGIQLMSLFGT 265
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---------CTPGQFSCGM 214
C CG S+ C+ K CDG+ DC+N DE C ++ C P +F CG
Sbjct: 77 CTSGLFSCGPSDACLLKDKVCDGRADCTNKRDESWELCGSDQPAAQTAPTCPPSEFQCGN 136
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLC 265
G+CI W+CD DC DGSDE + ++C C+ +P +LC
Sbjct: 137 GECIRHVWRCDNTPDC-SDGSDEEDCNQNECLVNNGGCSHHCVDLPMGFLC 186
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 70/156 (44%), Gaps = 19/156 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C +E C SS +C++ C+G DC +G DE N CT G FSCG C+ +
Sbjct: 40 CKKDEFTCRSS-RCISTKLLCNGVDDCGDGSDEDSCQN--CTSGLFSCGPSDACLLKDKV 96
Query: 224 CDGFVDCLED--------GSDEPNT-CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CDG DC GSD+P C + QC + +CI H W CD DCS
Sbjct: 97 CDGRADCTNKRDESWELCGSDQPAAQTAPTCPPSEFQCG-NGECIRHVWRCDNTPDCS-- 153
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
D +DE+ ++C C+ +P +LC
Sbjct: 154 ---DGSDEEDCNQNECLVNNGGCSHHCVDLPMGFLC 186
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 62/139 (44%), Gaps = 16/139 (11%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP-APEIFPLD----------- 105
LA+++ HR Q ++++ + + + L+ D P A + PL
Sbjct: 324 LAVDWIHRLLYWTSPDQGSLNAALMDGSPEHPLITGLDEPSAVAVEPLQGFVFWTQCGSA 383
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E+A + G R+ LVT ++ P ++ +D + +LYW D ++ V +G H +
Sbjct: 384 PKIERASLDGHGRTALVTSSLNQPFAITLDIPRQLLYWFDQGARSISRVTFEGRHRKTVV 443
Query: 166 HPNELRCGSSNQCVALSKF 184
N G ++ L+ F
Sbjct: 444 ESN----GYLDRVFGLAVF 458
>gi|291237320|ref|XP_002738583.1| PREDICTED: lipophorin receptor-like [Saccoglossus kowalevskii]
Length = 869
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 132/295 (44%), Gaps = 40/295 (13%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199
I +C S L V + + G C ++ C + +C+ S CDG DC + DEG
Sbjct: 4 IHLFCISLLVLVFASAIHG------CESDQFTC-TDGKCIPNSWVCDGASDCEDHSDEGI 56
Query: 200 FCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
C EC +F C + CIP W CDG DCL +GSDE N C + + +C S C
Sbjct: 57 TCGPTECVENEFQCDISLCIPTRWVCDGDTDCL-NGSDEQNCENLTCSDEEFKCNNS-VC 114
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
IP W+CD++ DCS DN+DE+ D+ C + ++ C+ S CIP W CD + DC
Sbjct: 115 IPVKWVCDKQDDCS-----DNSDENGCEDQERTCADNEMACS-SGHCIPMAWHCDGDDDC 168
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
S N +D V C +E CG QC+ S CDG DCSN DE
Sbjct: 169 SDGTDEVNCLQD---------VTCSSSEFTCGDG-QCITDSWRCDGDTDCSNAMDE---- 214
Query: 377 NNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
C P+ +G C G + D D +D S ++ C N
Sbjct: 215 --------TDCGSTQRPSCKGTQFTCDDGSCIHMAWVCDGDPDCMDDSDERDCEN 261
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 138/362 (38%), Gaps = 74/362 (20%)
Query: 157 DGSHNAVLCHP-----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFS 211
D S + C P NE +C S C+ CDG DC NG DE N C+ +F
Sbjct: 50 DHSDEGITCGPTECVENEFQCDIS-LCIPTRWVCDGDTDCLNGSDEQNCENLTCSDEEFK 108
Query: 212 CGMGKCIPESWKCDGFVDCLEDG-----SDEPNTCI---HQCFNGQ-------------- 249
C CIP W CD DC ++ D+ TC C +G
Sbjct: 109 CNNSVCIPVKWVCDKQDDCSDNSDENGCEDQERTCADNEMACSSGHCIPMAWHCDGDDDC 168
Query: 250 ------------VQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
V C+ S+ +CI +W CD + DCS + +D TD + C
Sbjct: 169 SDGTDEVNCLQDVTCSSSEFTCGDGQCITDSWRCDGDTDCS--NAMDETDCGSTQRPSCK 226
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHNAVLCHPNELRCGS 349
Q C CI W+CD + DC D + + D D+ F+ + +C P E
Sbjct: 227 GTQFTCD-DGSCIHMAWVCDGDPDCMDDSDERDCENDGCTDEQFTCKSGVCIPKEAE--- 282
Query: 350 SNQCVALSKFCDGKPDCSNGEDE-----GPFC--NNKADCENLKCSHKCSPTPRGAMCFC 402
CDGK DC + DE P C N C+N C R C
Sbjct: 283 ----------CDGKMDCYDASDESDCTPAPVCDINTHFTCDNGACVEHSKTCDRNNDCG- 331
Query: 403 PAGQNPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
P+ CV +EC +G C QTC + + Y C C G+ L D K+C ++ +
Sbjct: 332 DWSDEPSPQICV-LNECKHQNGGCSQTCIDLPIDYYCECASGFRLSWDNKTCKDIDECGE 390
Query: 462 EP 463
P
Sbjct: 391 NP 392
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 113/259 (43%), Gaps = 27/259 (10%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ +F+CG G+CI +SW+CDG DC D +D +T C Q C CI
Sbjct: 180 DVTCSSSEFTCGDGQCITDSWRCDGDTDCSNAMDETDCGSTQRPSCKGTQFTCD-DGSCI 238
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
W+CD + DC +D++DE + C + Q C S CIP CD +MDC
Sbjct: 239 HMAWVCDGDPDC-----MDDSDERDCENDGCTDEQFTCK-SGVCIPKEAECDGKMDCY-- 290
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCN 377
D D +D A +C N + CV SK CD DC + DE C
Sbjct: 291 DASDESD-------CTPAPVCDINTHFTCDNGACVEHSKTCDRNNDCGDWSDEPSPQICV 343
Query: 378 -NKADCENLKCSHKCSPTPRGAMCFCPAGQN---PNKTQCVDADECL--IDGSCDQTCTN 431
N+ +N CS C P C C +G NKT C D DEC D C N
Sbjct: 344 LNECKHQNGGCSQTCIDLPIDYYCECASGFRLSWDNKT-CKDIDECGENPDICGHLFCFN 402
Query: 432 THLSYVCSCTEGYTLRPDG 450
+ C+C + Y + PDG
Sbjct: 403 DDGGFHCACPKEYVIYPDG 421
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 14/147 (9%)
Query: 37 VDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+DN D ++D ++ L +++ N + V+ V Q L + D+
Sbjct: 489 LDNKDGNFDVILDTNISIADGLVVDWVAGNIYWTDTGRNTVNVVSED-GQFRKTLFNHDV 547
Query: 97 PAPEIFPLD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
P +D R+E+AGM G NR +++ ++ WP+ + IDY LYW
Sbjct: 548 DEPRALAVDPQEGLFYWSDWGSNRIERAGMDGSNRQTILSDDLGWPNGISIDYISRKLYW 607
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNEL 170
D+ L+T+ +DG L + L
Sbjct: 608 VDAKLHTISYSDMDGQQRITLLKDSVL 634
>gi|323649990|gb|ADX97081.1| low-density lipoprotein receptor-related protein 1 [Perca
flavescens]
Length = 808
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 131/295 (44%), Gaps = 28/295 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C ++ +C+A CDG DC++G DE C+ +C QF C G CIP W+C
Sbjct: 16 CSESEFAC-TNGRCIAGRWKCDGDHDCADGSDENG-CDLKCDNDQFQCKNGHCIPIRWRC 73
Query: 225 DGFVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC+ DGSDE N C + QC + C P W CD E DC D D T
Sbjct: 74 DADPDCM-DGSDEENCGSAAGRHCPLDEFQCN-NTLCKPLAWKCDGEDDCG--DNSDETP 129
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ KF +C + C+ + CD CS DN DE + + C
Sbjct: 130 EECRKFQCPPTRAFRCQNDRVCLQVSKRCDGVSHCS-----DNLDE-LNCQVLPAVLTCE 183
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC----------NNKADCENLKCSHKC 391
+E RC ++ +C++ + C+ DC + + C +N+ C + +H C
Sbjct: 184 KDEFRC-ANGRCISSTLRCNFFNDCEDYGSDEINCKTDTKLNDCRSNRTQCGDGDEAH-C 241
Query: 392 SPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYT 445
+ C C P Q C D +ECL G C C NT SY CSC + +T
Sbjct: 242 VTNGTDSFCSCKPGFQKTGHHTCGDKNECLQFGVCSHVCNNTKGSYKCSCHKYFT 296
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV +NIQWP+ L +DY + LYW D+ L+ + SVR+DGS +
Sbjct: 464 KIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERLYWADAKLSVIGSVRLDGSDPVI 520
>gi|46561848|gb|AAT01141.1| proteoliaisin [Strongylocentrotus purpuratus]
Length = 1068
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 142/357 (39%), Gaps = 61/357 (17%)
Query: 51 ILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEK 110
+ +G+ LE R + +N S +LR + D + S + L ER +
Sbjct: 16 LCSGSEDSKLERGRRFLRR-GVSLENERSTKLRVLRHLDNVRSTNFTK---LHLKER--Q 69
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
R P T + Q S I +Q CD L + S + C P++
Sbjct: 70 LAPSYPYRCP--TASFQCESGKCIPSHQ----VCDGRLYDCPGGEDEQSCSISTCPPDQT 123
Query: 171 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDC 230
RC S +C+ CD DCSNGEDE +C +F C G CI + W CDG VDC
Sbjct: 124 RC-QSGECIPDYWLCDQIDDCSNGEDEVGCSRTQCEKDEFKCSTGSCITQDWLCDGHVDC 182
Query: 231 LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVD--- 278
LE G DE C GQ +C + C+ + ++CD +E+DC +I +
Sbjct: 183 LE-GEDEQACLTQTCPPGQFKCN-NDACVDNQYVCDGVHDCYFGEDELDCGGIEINEPCS 240
Query: 279 -----------------------NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+ ED C N Q +C C+P + LCD E D
Sbjct: 241 SRYQCDDGRCIQLETICDGAYDCSYGEDEQDCFSCRNDQFECP-EGLCLPRSALCDSEQD 299
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + +N V P++ C S +C++ C+G+ DCS GEDE
Sbjct: 300 CRYGEDEENC----------AVVAACPSKFECSSDGRCLSYGFVCNGRVDCSGGEDE 346
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
N C++ +K CDG DC +GEDE CN C +F CG G CIP S C+G DC DG
Sbjct: 812 NSCISQNKVCDGNRDCYSGEDENN-CNTVC---EFQCGNGNCIPNSAVCNGVRDCY-DGE 866
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
DE + + NG +C CI + +CD DC D TDE + + G+
Sbjct: 867 DESSCPLTNPCNG-FRCD-DGTCIESSRVCDTYKDCP-----DRTDEQNCESEEICPGKF 919
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C + CI ++CD DCS D+ C E C + C+
Sbjct: 920 NCQ-TGFCIELRYICDGRQDCSN---------GLDESSCPINEGCDSTEFTC-YNGHCIG 968
Query: 356 LSKFCDGKPDCSNGEDEG---PFCNNKADCENLKCSHKCSPTPRGAMC 400
+ CDG PDCS GEDE C N+ +C C PR +C
Sbjct: 969 GNNVCDGIPDCSAGEDEEKCPAGCGNEFECGRGNC------IPRSYVC 1010
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 113/289 (39%), Gaps = 56/289 (19%)
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSK 183
+ + P S + D QD Y D V V P++ C S +C++
Sbjct: 284 EGLCLPRSALCDSEQDCRYGEDEENCAV-----------VAACPSKFECSSDGRCLSYGF 332
Query: 184 FCDGKPDCSNGEDE----------------------GPFCNAECTPGQFSCGMGK---CI 218
C+G+ DCS GEDE C + C +G C+
Sbjct: 333 VCNGRVDCSGGEDERGCISQPTQLTQPTHPTRPTQPTQPTQPTCRQNEIRCNVGSRVGCL 392
Query: 219 PESWKCDGFVDCL--EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
E+ CDG DCL ED + P H C G +C KCI + LCD +DCS
Sbjct: 393 AEAKVCDGRNDCLRGEDERNCPLVVPHDC-GGDFRCD-EGKCISRSRLCDRFIDCS---- 446
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ DE+ QC G QC + C+P + +CD ++DC+ D DE +
Sbjct: 447 -EGEDEEDCVMTQC-GGDFQC-MDGTCVPASLICDGQVDCA-----DGEDEVSCRELPQC 498
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
V L+ S+ QCV FCDG DC DE C + C L
Sbjct: 499 DV---DANLKMCSTGQCVPGEAFCDGWVDCYGAVDEAG-CPESSSCRGL 543
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N RC C+ S+ CD DC + DE + E PG+F+C G CI + CDG
Sbjct: 878 NGFRC-DDGTCIESSRVCDTYKDCPDRTDEQNCESEEICPGKFNCQTGFCIELRYICDGR 936
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC +G DE + I++ + + CI N +CD DCS ED +K
Sbjct: 937 QDC-SNGLDESSCPINEGCDSTEFTCYNGHCIGGNNVCDGIPDCS-------AGEDEEKC 988
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+ +C CIP +++C+ +DCS D DE V C+ E C
Sbjct: 989 PAGCGNEFECGRG-NCIPRSYVCNGRLDCS-----DGEDE----------VGCNRCEFEC 1032
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
C+ ++ CD DCS GEDE
Sbjct: 1033 -DDGSCIEAARICDNTQDCSRGEDE 1056
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDG 226
E +CG+ N C+ S C+G DC +GEDE P N F C G CI S CD
Sbjct: 841 EFQCGNGN-CIPNSAVCNGVRDCYDGEDESSCPLTNP---CNGFRCDDGTCIESSRVCDT 896
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST--DDIVDNTDEDW 284
+ DC D +DE N + G+ C + CI ++CD DCS D+ +E
Sbjct: 897 YKDC-PDRTDEQNCESEEICPGKFNCQ-TGFCIELRYICDGRQDCSNGLDESSCPINEGC 954
Query: 285 DKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
D C+NG CI N +CD DCS ED +K + N
Sbjct: 955 DSTEFTCYNGH--------CIGGNNVCDGIPDCS-------AGEDEEKCPAGCG-----N 994
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E CG N C+ S C+G+ DCS+GEDE
Sbjct: 995 EFECGRGN-CIPRSYVCNGRLDCSDGEDE 1022
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 99/253 (39%), Gaps = 50/253 (19%)
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGK 188
P+SL+ D D + ++ E + D N +C S+ QCV FCDG
Sbjct: 472 PASLICDGQVDCADG-EDEVSCRELPQCDVDANLKMC--------STGQCVPGEAFCDGW 522
Query: 189 PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT-------C 241
DC DE + G F C C+ + CDG +DC+ DG DE C
Sbjct: 523 VDCYGAVDEAGCPESSSCRGLFLCRTDYCLESTRICDGSLDCI-DGRDETEVSCFTAPDC 581
Query: 242 I--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL 299
I +C NG+ C + +C+ DCS + +N F +C +G
Sbjct: 582 IDGFECNNGE--------CTDISSVCNGARDCSEGEDEENCLPGCTAF-ECADG------ 626
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
CIP + LCD DC + N E+ + S C+
Sbjct: 627 --TCIPISSLCDGNADCRAAEDEINCPEECSGFTC--------------SDGSCIDTRDV 670
Query: 360 CDGKPDCSNGEDE 372
C+G+PDCS G+DE
Sbjct: 671 CNGRPDCSRGDDE 683
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ S C+G+ DCS G+DE + C+ G F CG G CI + C+ + DC ++ +E
Sbjct: 736 CIPDSAVCNGRRDCSGGDDEVGCSDDRCSTG-FRCGNGNCIDSNRVCNRYNDCGDNSDEE 794
Query: 238 PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
C C +G V CI N +CD DC + + +N + + QC NG
Sbjct: 795 TYACDGTPCSDGFV--CDDNSCISQNKVCDGNRDCYSGEDENNCNTVCE--FQCGNG--- 847
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVA 355
CIP++ +C+ DC +D + L +P N RC C+
Sbjct: 848 -----NCIPNSAVCNGVRDC------------YDGEDESSCPLTNPCNGFRC-DDGTCIE 889
Query: 356 LSKFCDGKPDCSNGEDE 372
S+ CD DC + DE
Sbjct: 890 SSRVCDTYKDCPDRTDE 906
>gi|297668559|ref|XP_002812502.1| PREDICTED: low-density lipoprotein receptor-related protein
1B-like, partial [Pongo abelii]
Length = 288
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 201 CNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCI 259
C + CT QF C KCIP WKCD DC DGSDEP+ C +C G+ QC +
Sbjct: 130 CLSNCTASQFRCKTDKCIPFWWKCDTVDDC-GDGSDEPDDCPEFKCQPGRFQCGTGLCAL 188
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P ++CD E DC DN+DE H C +GQ +C ++KCIP N C+ + DC
Sbjct: 189 PA-FICDGENDCG-----DNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-- 240
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE+ ++ N+ C P+ +C ++ C++ CD PDC++ DE
Sbjct: 241 ------DEEDERDCPENS--CSPDYFQCKTTKHCISKLWVCDEDPDCADASDEA 286
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 80/154 (51%), Gaps = 8/154 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 134 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 192
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 193 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 246
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+ C QC +K CI W+CDE+ DC+
Sbjct: 247 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA 280
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCA 298
TC+ C Q +C + KCIP W CD + DD D +DE D +C G+ QC
Sbjct: 129 TCLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDDCPEFKCQPGRFQCG 182
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+P ++CD E DC DN+DE + + +C + +C + +C+ ++
Sbjct: 183 TGLCALPA-FICDGENDCG-----DNSDE-----LNCDTHVCLSGQFKCTKNQKCIPVNL 231
Query: 359 FCDGKPDCSNGEDE 372
C+G+ DC + EDE
Sbjct: 232 RCNGQDDCGDEEDE 245
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 212 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 271
Query: 223 KCDGFVDCLEDGSDEPN 239
CD DC D SDE N
Sbjct: 272 VCDEDPDC-ADASDEAN 287
>gi|444728054|gb|ELW68518.1| Basement membrane-specific heparan sulfate proteoglycan core
protein [Tupaia chinensis]
Length = 4562
Score = 90.5 bits (223), Expect = 2e-15, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 81/180 (45%), Gaps = 38/180 (21%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPES 221
LC E C S N+CVAL CD +PDC + DE C C P + +C G CIPE
Sbjct: 284 LCTEAEFACHSYNECVALEYHCDRRPDCRDMSDELN-CGRPVPCEPHEAACHSGHCIPED 342
Query: 222 WKCDGFVDCLEDGSD----------EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ CDG DC DGSD EPN C NG CAL W CD + DC
Sbjct: 343 YVCDGQEDC-TDGSDELDCGPSPPCEPNE--FPCGNG--HCALKL------WHCDGDFDC 391
Query: 272 STDDIVDNTDEDWDKFHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
D TDE Q C + +C + CIP ++ CDEE DC D +DE
Sbjct: 392 E-----DRTDEANCPAQQPGEVCGPTEFRCVSTNTCIPASFHCDEESDCP-----DRSDE 441
Score = 71.2 bits (173), Expect = 1e-09, Method: Composition-based stats.
Identities = 56/172 (32%), Positives = 77/172 (44%), Gaps = 19/172 (11%)
Query: 205 CTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPH 261
CT +F+C +C+ + CD DC D SDE N C C + C S CIP
Sbjct: 285 CTEAEFACHSYNECVALEYHCDRRPDC-RDMSDELN-CGRPVPCEPHEAACH-SGHCIPE 341
Query: 262 NWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+++CD + DC+ D +DE D C + C + C W CD + DC
Sbjct: 342 DYVCDGQEDCT-----DGSDELDCGPSPPCEPNEFPCG-NGHCALKLWHCDGDFDCE--- 392
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D TDE + +C P E RC S+N C+ S CD + DC + DE
Sbjct: 393 --DRTDEA-NCPAQQPGEVCGPTEFRCVSTNTCIPASFHCDEESDCPDRSDE 441
Score = 42.0 bits (97), Expect = 0.73, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 35/91 (38%), Gaps = 14/91 (15%)
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
LC E C S N+CVAL CD +PDC + DE L C P A
Sbjct: 284 LCTEAEFACHSYNECVALEYHCDRRPDCRDMSDE------------LNCGRPVPCEPHEA 331
Query: 399 MCFCPAGQNPNKTQCVDADECLIDGSCDQTC 429
C +G + D E DGS + C
Sbjct: 332 ACH--SGHCIPEDYVCDGQEDCTDGSDELDC 360
>gi|332853025|ref|XP_003316161.1| PREDICTED: low-density lipoprotein receptor [Pan troglodytes]
Length = 692
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCA-LS 300
+C + QC KCI + W+CD +C D +DE + C +G C
Sbjct: 26 RCERNEFQCQ-DGKCISYKWVCDGSAECQ-----DGSDESQETCLSVTCKSGDFSCGGRV 79
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKF 359
+CIP W CD ++DC DN ++ LC PN+ +C S +C+ L K
Sbjct: 80 NRCIPQFWRCDGQVDC------DNGSDE-----QGCLTLCEGPNKFKC-HSGECITLDKV 127
Query: 360 CDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDA 416
C+ DC + DE +C N CSH C+ G C CP G Q + +C D
Sbjct: 128 CNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI 187
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
DEC +C Q C N Y C C EG+ L P K+C AV A + F++ ++R+
Sbjct: 188 DECQHPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRK 243
Query: 477 IHLNGS 482
+ L+ S
Sbjct: 244 MTLDRS 249
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
W+CDG VDC ++GSDE C+ C S +CI + +C+ DC
Sbjct: 86 FWRCDGQVDC-DNGSDEQG-CLTLCEGPNKFKCHSGECITLDKVCNMARDC 134
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 368 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 419
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 420 IDVNGGNRKTVLEDEKRLAHPFSL 443
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE P +F C G+CI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCLTLCEGPNKFKCHSGECITL 124
Query: 221 SWKCDGFVDCLEDGSDEP 238
C+ DC D SDEP
Sbjct: 125 DKVCNMARDC-RDWSDEP 141
>gi|403263172|ref|XP_003923927.1| PREDICTED: sortilin-related receptor [Saimiri boliviensis
boliviensis]
Length = 2156
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 139/323 (43%), Gaps = 54/323 (16%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 955
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGE---------------DE 197
L HP NE+ +Q LS F K S E +
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQMEILANQLTGLMDMKIFYK 1012
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSK 256
G C Q+ C G CI W CD DC D SDE N C + Q +C S
Sbjct: 1013 GKNTENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESG 1071
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CIP ++ CD E DC DN+DE+ + HQC + + C+ S CI +W+CD + DC
Sbjct: 1072 TCIPLSYKCDLEDDCG-----DNSDENHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC 1125
Query: 317 STDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DW + A+ C + +C + C+ CDG DC +G DE P
Sbjct: 1126 ----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP 1174
Query: 375 FCNNKADCENLKCSH-KCSPTPR 396
N + C +C + C P+ +
Sbjct: 1175 -VNCEKKCNGFRCPNGTCIPSSK 1196
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1063 TQFRCQESGTCIPLSYKCDLEDDCGDNSDENHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1122
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1123 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1175
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1176 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1222
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ + CDG C +G DE
Sbjct: 1223 FVCKNRQQCLFHAMVCDGIIQCRDGSDE 1250
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1279 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1337
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1338 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1387
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1388 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DG 1442
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1443 RDEA--NCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDE 1488
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ + CDG C +G DE P + C
Sbjct: 1209 DEQHCEPLCTHFMDFVCKNRQQCLFHAMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1268
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1269 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1326
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1327 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1385
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1386 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1440
Query: 368 NGEDEG 373
+G DE
Sbjct: 1441 DGRDEA 1446
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1315 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1373
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1374 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1432
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + +C + CI + CD +DCS
Sbjct: 1433 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCS 1483
>gi|194239717|ref|NP_001123523.1| sortilin-related receptor, L(DLR class) A repeats-containing-like
[Nasonia vitripennis]
Length = 2078
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 110/241 (45%), Gaps = 46/241 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG----KCIPE 220
C +E+ C S N CV + CDG+ DC +G DE + EC QF C +CI +
Sbjct: 1125 CKSDEISCKSDNNCVPKTWKCDGETDCEDGSDEDDCTSVECEVWQFDCNASDKSHRCIYK 1184
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--------------SKKCIPHNWLCD 266
SW CDG DC ++GSDE N + + +L +KKC+P+ W CD
Sbjct: 1185 SWVCDGDTDC-QNGSDEANCTSSESHSPTPTPSLLPTNSCSEWMFMCQNKKCVPYWWKCD 1243
Query: 267 ---------EEMDCSTDDIVDN------TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
+EM C D ++ TDE H C Q QC + +CI +W+CD
Sbjct: 1244 SVDDCGDDSDEMGCGFPDTSNSGTTAATTDE---HPHVCREFQFQC-FNGECIETSWMCD 1299
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
DCS+ + DE Y S+ + C ++ +C CV L C+G +C +G D
Sbjct: 1300 GSKDCSSGE-----DE---LYCSNGPIGCKEDQFKCFVDGSCVPLINICNGIQECPDGSD 1351
Query: 372 E 372
E
Sbjct: 1352 E 1352
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 186 DGKPDCSNGEDEGPFCNA-------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
DGK C G P+ N+ C QF+C G CIPE WKCDG DC D SDE
Sbjct: 980 DGKCMCPGGVT--PYANSTCPRVANSCAANQFACDSGVCIPEFWKCDGDNDC-GDHSDEN 1036
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
+C C +KCIP W+CD + DC D DE + C + Q +C
Sbjct: 1037 YCNKVKCQPNTFTCD-GEKCIPRYWVCDLDRDCK-----DGKDEMNCTYSNCTDSQFRCD 1090
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+ +CI H WLCD E DC D +DE + S C +E+ C S N CV +
Sbjct: 1091 -NGRCISHRWLCDGEDDCR-----DGSDEK-NCSTSIPPSTCKSDEISCKSDNNCVPKTW 1143
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC 387
CDG+ DC +G DE DC +++C
Sbjct: 1144 KCDGETDCEDGSDED-------DCTSVEC 1165
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 114/288 (39%), Gaps = 81/288 (28%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N V C PN C +C+ CD DC +G+DE + CT QF C G+CI
Sbjct: 1039 NKVKCQPNTFTC-DGEKCIPRYWVCDLDRDCKDGKDEMNCTYSNCTDSQFRCDNGRCISH 1097
Query: 221 SWKCDGFVDCLEDGSDEPN--TCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W CDG DC DGSDE N T I C + ++ C C+P W CD E DC
Sbjct: 1098 RWLCDGEDDC-RDGSDEKNCSTSIPPSTCKSDEISCKSDNNCVPKTWKCDGETDCE---- 1152
Query: 277 VDNTDED---------W-------DKFHQCF-------------NG--QVQCALS----- 300
D +DED W DK H+C NG + C S
Sbjct: 1153 -DGSDEDDCTSVECEVWQFDCNASDKSHRCIYKSWVCDGDTDCQNGSDEANCTSSESHSP 1211
Query: 301 ---------------------KKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWD 330
KKC+P+ W CD +EM C D N+
Sbjct: 1212 TPTPSLLPTNSCSEWMFMCQNKKCVPYWWKCDSVDDCGDDSDEMGCGFPD-TSNSGTTAA 1270
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
H V C + +C + +C+ S CDG DCS+GEDE +C+N
Sbjct: 1271 TTDEHPHV-CREFQFQC-FNGECIETSWMCDGSKDCSSGEDE-LYCSN 1315
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQF 210
S+ + C ++ +C CV L C+G +C +G DE P C G F
Sbjct: 1314 SNGPIGCKEDQFKCFVDGSCVPLINICNGIQECPDGSDERGCDHHRPSPPPTTSCHTGFF 1373
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEP-----NTCIHQCFNGQV 250
C +C P S C+G DC DG DE NT ++Q N V
Sbjct: 1374 PCDETRCFPLSAYCNGKQDCY-DGFDESNCEKNNTRVYQVLNIGV 1417
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 22/147 (14%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGM-GKC 217
+C + +C + +C+ S CDG DCS+GEDE GP C QF C + G C
Sbjct: 1278 VCREFQFQC-FNGECIETSWMCDGSKDCSSGEDELYCSNGPIG---CKEDQFKCFVDGSC 1333
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ---------CFNGQVQCALSKKCIPHNWLCDEE 268
+P C+G +C DGSDE C H C G C +C P + C+ +
Sbjct: 1334 VPLINICNGIQEC-PDGSDE-RGCDHHRPSPPPTTSCHTGFFPCD-ETRCFPLSAYCNGK 1390
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQV 295
DC N +++ + +Q N V
Sbjct: 1391 QDCYDGFDESNCEKNNTRVYQVLNIGV 1417
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 70/195 (35%), Gaps = 62/195 (31%)
Query: 187 GKPDCSNG------EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240
G PD SN DE P C QF C G+CI SW CDG DC G DE
Sbjct: 1258 GFPDTSNSGTTAATTDEHPHV---CREFQFQCFNGECIETSWMCDGSKDC-SSGEDE--- 1310
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALS 300
C NG + C ED Q +C +
Sbjct: 1311 --LYCSNGPIGCK----------------------------ED----------QFKCFVD 1330
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDE---DWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
C+P +C+ +C D +DE D + CH C + +C LS
Sbjct: 1331 GSCVPLINICNGIQECP-----DGSDERGCDHHRPSPPPTTSCHTGFFPCDET-RCFPLS 1384
Query: 358 KFCDGKPDCSNGEDE 372
+C+GK DC +G DE
Sbjct: 1385 AYCNGKQDCYDGFDE 1399
>gi|307775416|ref|NP_001182729.1| low-density lipoprotein receptor isoform 4 precursor [Homo sapiens]
gi|194386604|dbj|BAG61112.1| unnamed protein product [Homo sapiens]
Length = 692
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQCA-LS 300
+C + QC KCI + W+CD +C D +DE + C +G C
Sbjct: 26 RCERNEFQCQ-DGKCISYKWVCDGSAECQ-----DGSDESQETCLSVTCKSGDFSCGGRV 79
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKF 359
+CIP W CD ++DC DN ++ LC PN+ +C S +C+ L K
Sbjct: 80 NRCIPQFWRCDGQVDC------DNGSDE-----QGCLTLCEGPNKFKC-HSGECITLDKV 127
Query: 360 CDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDA 416
C+ DC + DE +C N CSH C+ G C CP G Q + +C D
Sbjct: 128 CNMARDCRDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI 187
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
DEC +C Q C N Y C C EG+ L P K+C AV A + F++ ++R+
Sbjct: 188 DECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG----SIAYLFFTNRHEVRK 243
Query: 477 IHLNGS 482
+ L+ S
Sbjct: 244 MTLDRS 249
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
W+CDG VDC ++GSDE C+ C S +CI + +C+ DC
Sbjct: 86 FWRCDGQVDC-DNGSDEQG-CLTLCEGPNKFKCHSGECITLDKVCNMARDC 134
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 368 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 419
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 420 IDVNGGNRKTILEDEKRLAHPFSL 443
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE P +F C G+CI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCLTLCEGPNKFKCHSGECITL 124
Query: 221 SWKCDGFVDCLEDGSDEP 238
C+ DC D SDEP
Sbjct: 125 DKVCNMARDC-RDWSDEP 141
>gi|196007566|ref|XP_002113649.1| hypothetical protein TRIADDRAFT_27118 [Trichoplax adhaerens]
gi|190584053|gb|EDV24123.1| hypothetical protein TRIADDRAFT_27118 [Trichoplax adhaerens]
Length = 209
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWK 223
C +E RC S +C+ S+ C+ + DC +G DE C G+F C GKCIP+S+K
Sbjct: 9 CSEDEFRCKRSRKCIPASRRCNDRRDCRDGSDERNC--RTCRRGEFQCKRSGKCIPKSYK 66
Query: 224 CDGFVDCLEDGSDEPNTCI---HQCF------NGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CD DC DGSDE N C+ N Q +C S KCIP +++CD+ DC
Sbjct: 67 CDSHRDC-RDGSDERNCTSLNNRSCYSFYITKNQQFRCKRSGKCIPKSFVCDDHRDCR-- 123
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE K +C + Q C +KCIP +C+ DC D +DE +
Sbjct: 124 ---DGSDERNCKV-RCRSTQFACFDGRKCIPRRKVCNRRFDCP-----DRSDEKF----- 169
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C + +C++ +FCD DCS+ DE
Sbjct: 170 --CGQCSLFKFECRRTGRCISARRFCDNFEDCSDRSDE 205
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTP------GQF 210
N C E +C S +C+ S CD DC +G DE N C QF
Sbjct: 42 RNCRTCRRGEFQCKRSGKCIPKSYKCDSHRDCRDGSDERNCTSLNNRSCYSFYITKNQQF 101
Query: 211 SCGM-GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
C GKCIP+S+ CD DC DGSDE N C +C + Q C +KCIP +C+
Sbjct: 102 RCKRSGKCIPKSFVCDDHRDC-RDGSDERN-CKVRCRSTQFACFDGRKCIPRRKVCNRRF 159
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC D +DE + QC + +C + +CI CD DCS D +DE
Sbjct: 160 DCP-----DRSDEKF--CGQCSLFKFECRRTGRCISARRFCDNFEDCS-----DRSDE 205
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 54/131 (41%), Gaps = 25/131 (19%)
Query: 119 SPLVTKNIQW---------PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNE 169
S +TKN Q+ P S V CD H + + D + V C +
Sbjct: 92 SFYITKNQQFRCKRSGKCIPKSFV----------CDDHRDCRDGS--DERNCKVRCRSTQ 139
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPESWKCDGFV 228
C +C+ K C+ + DC + DE FC +C+ +F C G+CI CD F
Sbjct: 140 FACFDGRKCIPRRKVCNRRFDCPDRSDE-KFC-GQCSLFKFECRRTGRCISARRFCDNFE 197
Query: 229 DCLEDGSDEPN 239
DC D SDE
Sbjct: 198 DC-SDRSDEKR 207
>gi|110082727|ref|NP_001006351.2| SCO-spondin precursor [Gallus gallus]
gi|110287971|sp|Q2PC93.1|SSPO_CHICK RecName: Full=SCO-spondin; Flags: Precursor
gi|84617293|emb|CAI29216.1| SCO-spondin [Gallus gallus]
Length = 5255
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C S +CV + CD + DC +G DE C C P Q C G+C+P +C
Sbjct: 1363 CPDSEFPCRSGGRCVPGAWLCDNEDDCGDGSDE--VCALHCAPHQHRCADGQCVPWGARC 1420
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE C + +CA S +CIP +C+ E+DC D++DE
Sbjct: 1421 DGLSDC-GDGSDERGCPPPPCAPPEFRCA-SGRCIPRAHVCNGELDCG---FADDSDEA- 1474
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C G+ QCA + +C+P+ C+ DC D +DE +C
Sbjct: 1475 GCSPSCSVGEFQCA-AGRCVPYPHRCNGHDDCG-----DFSDE--------RGCVCPAGH 1520
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+C + QC+ + CDG DC +G DE FC ++ C
Sbjct: 1521 FQCPDA-QCLPPAALCDGMQDCGDGTDEA-FCPDRITC 1556
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A+ C P++ RC + QCV CDG DC +G DE C P +F C G+CIP +
Sbjct: 1398 ALHCAPHQHRC-ADGQCVPWGARCDGLSDCGDGSDERGCPPPPCAPPEFRCASGRCIPRA 1456
Query: 222 WKCDGFVDC-LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+G +DC D SDE C C G+ QCA + +C+P+ C+ DC D +
Sbjct: 1457 HVCNGELDCGFADDSDEAG-CSPSCSVGEFQCA-AGRCVPYPHRCNGHDDCG-----DFS 1509
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C G QC +C+P LCD DC D TDE F + + C
Sbjct: 1510 DE---RGCVCPAGHFQCP-DAQCLPPAALCDGMQDCG-----DGTDE----AFCPDRITC 1556
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P +L C CV+ K CDG DC +G DE
Sbjct: 1557 APGQLPC-PDGSCVSQVKLCDGIWDCRDGWDE 1587
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 91/235 (38%), Gaps = 39/235 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----------------PFCNAE-- 204
+ C P +L C CV+ K CDG DC +G DE P A
Sbjct: 1554 ITCAPGQLPC-PDGSCVSQVKLCDGIWDCRDGWDESSVRCMVSWAPPAPTQLPTVPANGT 1612
Query: 205 ----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
C P +F C G+C+P W CD DC D SDE C C G CAL CI
Sbjct: 1613 AAPVCGPYEFPCRSGQCVPRGWVCDSEADC-PDNSDELG-CNRSCVLGHFPCALGAHCIH 1670
Query: 261 HNWLCDEEMDCS-----TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
++ LCD C +DD +T H N +V C+ +CD +D
Sbjct: 1671 YDHLCDGIPHCPDHSDESDDNCGSTQIPPCPGHFVCNNRV-------CVNATRVCDGALD 1723
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
C + + E + N + E C C+ + C+G PDC +G+
Sbjct: 1724 CPQGED-ELACEGYVPTGERNQTVGPCAEYSC-RDGDCITFKQVCNGLPDCRDGD 1776
>gi|322800113|gb|EFZ21219.1| hypothetical protein SINV_15415 [Solenopsis invicta]
Length = 1518
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 109/239 (45%), Gaps = 34/239 (14%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + C+ QF+C CIPE WKCDG DC D SDE + C +C KC
Sbjct: 683 PRIASTCSSNQFACNNNVCIPEFWKCDGDNDC-GDNSDEIHCNRATCSPNNFECD-DNKC 740
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP W+CD + DC D DE + C Q +C + +CI H W CD E DC
Sbjct: 741 IPKYWVCDLDRDCK-----DGKDEMNCTYTNCTETQFKCN-NGRCISHRWRCDGEDDCR- 793
Query: 319 DDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DE + K N C +E+ C S + C+ S CDG+PDC +G DE
Sbjct: 794 ----DGSDEQNCTKSVQPNT--CRSDEIICKSDHSCIPTSWKCDGEPDCEDGADE----- 842
Query: 378 NKADCENLKC---SHKCSPTP-RGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNT 432
DC N+ C +C+ T G C KT D D+ +DGS + CT T
Sbjct: 843 --KDCNNMVCELWQFQCNNTKDNGHRCIY-------KTWACDGDKDCVDGSDEFNCTFT 892
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C N+ C ++N C+ CDG DC + DE A C+P F C KCIP+
Sbjct: 686 ASTCSSNQFAC-NNNVCIPEFWKCDGDNDCGDNSDEIHCNRATCSPNNFECDDNKCIPKY 744
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
W CD DC +DG DE N C Q +C + +CI H W CD E DC D +D
Sbjct: 745 WVCDLDRDC-KDGKDEMNCTYTNCTETQFKCN-NGRCISHRWRCDGEDDCR-----DGSD 797
Query: 282 ED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
E + + C + ++ C CIP +W CD E DC D DE N
Sbjct: 798 EQNCTKSVQPNTCRSDEIICKSDHSCIPTSWKCDGEPDCE-----DGADEK-----DCNN 847
Query: 338 VLCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDE 372
++C + +C ++ ++C+ + CDG DC +G DE
Sbjct: 848 MVCELWQFQCNNTKDNGHRCIYKTWACDGDKDCVDGSDE 886
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/279 (29%), Positives = 110/279 (39%), Gaps = 72/279 (25%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C PN C N+C+ CD DC +G+DE CT QF C G+CI
Sbjct: 724 NRATCSPNNFEC-DDNKCIPKYWVCDLDRDCKDGKDEMNCTYTNCTETQFKCNNGRCISH 782
Query: 221 SWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W+CDG DC DGSDE N + C + ++ C CIP +W CD E DC +D
Sbjct: 783 RWRCDGEDDC-RDGSDEQNCTKSVQPNTCRSDEIICKSDHSCIPTSWKCDGEPDC--EDG 839
Query: 277 VDNTD------EDW--------DKFHQC-------------------FNGQVQCALS--- 300
D D E W D H+C FN LS
Sbjct: 840 ADEKDCNNMVCELWQFQCNNTKDNGHRCIYKTWACDGDKDCVDGSDEFNCTFTTTLSPPL 899
Query: 301 ------------------KKCIPHNWLCD---------EEMDCSTDDIVDNTDEDWDKYF 333
KKC+P+ W CD +E+ C T D + Y
Sbjct: 900 IPILPTNSCNDWMFMCNNKKCVPYWWKCDSVDDCGDGSDEIGCGTVDGGGVLEPTSPVYT 959
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + +C ++ +C +N C+ S CDG DC +GEDE
Sbjct: 960 TQQSRICREHQFQC-YNNDCIENSWVCDGSKDCPSGEDE 997
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIP 219
C +E+ C S + C+ S CDG+PDC +G DE N C QF C K CI
Sbjct: 810 CRSDEIICKSDHSCIPTSWKCDGEPDCEDGADEKDCNNMVCELWQFQCNNTKDNGHRCIY 869
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------SKKCIPHNWLCD 266
++W CDG DC+ DGSDE N + + L +KKC+P+ W CD
Sbjct: 870 KTWACDGDKDCV-DGSDEFNCTFTTTLSPPLIPILPTNSCNDWMFMCNNKKCVPYWWKCD 928
Query: 267 ---------EEMDCSTDD---IVDNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+E+ C T D +++ T + + C Q QC + CI ++W+CD
Sbjct: 929 SVDDCGDGSDEIGCGTVDGGGVLEPTSPVYTTQQSRICREHQFQC-YNNDCIENSWVCDG 987
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGED 371
DC + + DE ++ + + C N + C CV LS C+G +C +G D
Sbjct: 988 SKDCPSGE-----DE---QHCAQTHMSCRENDQFMCRQDGSCVPLSSICNGIEECPDGSD 1039
Query: 372 E 372
E
Sbjct: 1040 E 1040
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 10/81 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCGMGKCI 218
++ C CV LS C+G +C +G DE P C G F C +C
Sbjct: 1011 DQFMCRQDGSCVPLSSICNGIEECPDGSDELGCHTDHEANPPATPSCYVGLFPCDENRCF 1070
Query: 219 PESWKCDGFVDCLEDGSDEPN 239
P + CDG DCL DG DE N
Sbjct: 1071 PLAAYCDGNHDCL-DGFDESN 1090
>gi|6739500|gb|AAF27280.1|AF117899_1 LDLR-FUT fusion protein [Homo sapiens]
Length = 363
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/225 (33%), Positives = 105/225 (46%), Gaps = 26/225 (11%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG-- 213
G+ C NE +C +C++ CDG +C +G DE + C G FSCG
Sbjct: 20 GTAVGDRCERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
+ +CIP+ W+CDG VDC ++GSDE C + +C KCI ++CD + DC
Sbjct: 79 VNRCIPQFWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-- 134
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-- 331
+D +DE C QC S CIP W CD + DC D +DE W +
Sbjct: 135 ---LDGSDEASCPVLICGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRC 184
Query: 332 ----YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
F ++ C E C S +C+ S CDG PDC + DE
Sbjct: 185 RGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 82/174 (47%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-ALSKKCIP 260
C +F C GKCI W CDG +C +DGSDE TC+ C +G C +CIP
Sbjct: 26 RCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGRVNRCIP 84
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
W CD ++DC + +DE C + +C KCI ++CD + DC
Sbjct: 85 QFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC---- 134
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE S ++C P +C SS C+ CD PDC +G DE P
Sbjct: 135 -LDGSDE-----ASCPVLICGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 80/179 (44%), Gaps = 26/179 (14%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C + CG N+C+ CDG+ DC NG DE C+ +F C GKCI
Sbjct: 65 SVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSDEQGCPPKTCSQDEFRCHDGKCISR 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CD DCL DGSDE + + C QC S CIP W CD + DC D +
Sbjct: 125 QFVCDSDRDCL-DGSDEASCPVLICGPASFQCN-SSTCIPQLWACDNDPDCE-----DGS 177
Query: 281 DEDWDKF-----------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE W + C + C LS +CI +W CD DC D +DE+
Sbjct: 178 DE-WPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-----DKSDEE 229
>gi|170038035|ref|XP_001846859.1| vacuolar sorting protein [Culex quinquefasciatus]
gi|167881445|gb|EDS44828.1| vacuolar sorting protein [Culex quinquefasciatus]
Length = 2093
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P C S QCV CD DC +G DE A C +++CG G+CI +SW C
Sbjct: 1053 CPPYMFTCKSDKQCVPKYFVCDYDRDCLDGSDEQNCKAASCKSDEYTCGNGRCINKSWLC 1112
Query: 225 DGFVDCLEDGSDEP-----NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC DG+DE NT +C + +C + CIP W CD E DC+ D
Sbjct: 1113 DGEDDC-RDGTDEATCNKNNTATVECKPDEFRCNGTNSCIPKQWRCDTEHDCN-----DG 1166
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFSHNA 337
+DE +C + C +CI W CD E DC +D+ ++ + K N
Sbjct: 1167 SDEQDCTKKECESWMFTCESDGRCIYKTWQCDGEKDCKDGSDEKNCSSSTEMPKKPGINF 1226
Query: 338 V---LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+ CH +C ++++CV CD DC +G DE
Sbjct: 1227 LPGDSCHDWMFKC-ANDKCVPYWWKCDSVNDCGDGSDEA 1264
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 41/240 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM-GKCIPE 220
V C P+E RC +N C+ CD + DC++G DE EC F+C G+CI +
Sbjct: 1134 TVECKPDEFRCNGTNSCIPKQWRCDTEHDCNDGSDEQDCTKKECESWMFTCESDGRCIYK 1193
Query: 221 SWKCDGFVDCLEDGSDEPNTCIH---------------QCFNGQVQCALSKKCIPHNWLC 265
+W+CDG DC +DGSDE N C + +CA + KC+P+ W C
Sbjct: 1194 TWQCDGEKDC-KDGSDEKNCSSSTEMPKKPGINFLPGDSCHDWMFKCA-NDKCVPYWWKC 1251
Query: 266 D---------EEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
D +E C++ I+ +T K C + +C S CI ++CD
Sbjct: 1252 DSVNDCGDGSDEAGCNSTVIITSTTAKPIPTRKKERNCGLHEFRCD-SGVCISKRFVCDG 1310
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DCS + D+ + C +C S QC+ + K+C+G DC +G DE
Sbjct: 1311 YEDCSKGE---------DEGNCPSQKQCSNKHFKCRSDGQCLPMEKYCNGVVDCVDGSDE 1361
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 134/315 (42%), Gaps = 71/315 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+ + ++G+N ++ ++ + + +D++YW D +N+V S D H +
Sbjct: 876 IASSDLNGKNFMKILQQDSRVAHPFAVAVMKDLMYWDDWKMNSVYSA--DKDHGIMINII 933
Query: 164 ---LCHPNELR------------CGSSNQCVALSKFCDGKPD------CSNGEDEG---- 198
+ + +L+ C N+C S C G P C +G ++
Sbjct: 934 AEEMMNSMDLKIYGHSIQEGGNACSEGNKC---SHICVGAPKGGYSCLCPDGMEKNAQGQ 990
Query: 199 --------PFCN-------AECTPGQFSCGMGKCIPESWKCDGFVDCL----EDG--SDE 237
PF N + C F+C C+P+ +KCDG DC E+G +D+
Sbjct: 991 CLCPGGVTPFANNTCARSGSTCGSKFFACKNAVCVPQIYKCDGDDDCGDRSDEEGCPADK 1050
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
P C C K+C+P ++CD + DC +D +DE K C + + C
Sbjct: 1051 P-----PCPPYMFTCKSDKQCVPKYFVCDYDRDC-----LDGSDEQNCKAASCKSDEYTC 1100
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +CI +WLCD E DC D TDE + V C P+E RC +N C+
Sbjct: 1101 G-NGRCINKSWLCDGEDDCR-----DGTDEATCNKNNTATVECKPDEFRCNGTNSCIPKQ 1154
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC++G DE
Sbjct: 1155 WRCDTEHDCNDGSDE 1169
>gi|332019959|gb|EGI60419.1| Sortilin-related receptor [Acromyrmex echinatior]
Length = 2185
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 91/190 (47%), Gaps = 23/190 (12%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + C+ QF+C CIPE WKCDG DC D SDE C +C KC
Sbjct: 1105 PRVASTCSSNQFACNNNVCIPEFWKCDGDNDC-GDNSDEIQCNRATCSPNNFECD-DNKC 1162
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP W+CD + DC D DE + C Q +C L+ +CI H W CD E DC
Sbjct: 1163 IPKYWVCDLDRDCK-----DGKDEMNCTYSNCTETQFRC-LNGRCISHRWRCDGEDDCR- 1215
Query: 319 DDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D++DE + K N C +E+ C + + C+ S CDG+PDC +G DE
Sbjct: 1216 ----DSSDEQNCTKNIQPNT--CRADEIVCKTDHSCIPTSWKCDGEPDCEDGADE----- 1264
Query: 378 NKADCENLKC 387
DC N+ C
Sbjct: 1265 --KDCSNMVC 1272
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 100/223 (44%), Gaps = 34/223 (15%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C N+ C ++N C+ CDG DC + DE A C+P F C KCIP+
Sbjct: 1108 ASTCSSNQFAC-NNNVCIPEFWKCDGDNDCGDNSDEIQCNRATCSPNNFECDDNKCIPKY 1166
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------T 273
W CD DC +DG DE N C Q +C L+ +CI H W CD E DC T
Sbjct: 1167 WVCDLDRDC-KDGKDEMNCTYSNCTETQFRC-LNGRCISHRWRCDGEDDCRDSSDEQNCT 1224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+I NT C ++ C CIP +W CD E DC D DE
Sbjct: 1225 KNIQPNT---------CRADEIVCKTDHSCIPTSWKCDGEPDCE-----DGADEK----- 1265
Query: 334 SHNAVLCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDE 372
+ ++C + C ++ ++C+ S CDG DC +G DE
Sbjct: 1266 DCSNMVCESWQFTCNNTKENGHRCIYKSWACDGDKDCIDGSDE 1308
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/240 (32%), Positives = 105/240 (43%), Gaps = 42/240 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-----CIP 219
C +E+ C + + C+ S CDG+PDC +G DE N C QF+C K CI
Sbjct: 1232 CRADEIVCKTDHSCIPTSWKCDGEPDCEDGADEKDCSNMVCESWQFTCNNTKENGHRCIY 1291
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------SKKCIPHNWLCD 266
+SW CDG DC+ DGSDE N V L +KKC+P+ W CD
Sbjct: 1292 KSWACDGDKDCI-DGSDEVNCTTTTTLPTSVIPILPTNSCNDWMFMCNNKKCVPYWWKCD 1350
Query: 267 EEMDCS--TDDI-----VDNTDEDWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEE 313
DC +D+I D E H C Q QC + +CI + W+CD
Sbjct: 1351 SVDDCGDDSDEIGCGSSADGALEPTSPVHTTQQSRICREHQFQC-YNGECIENAWVCDGL 1409
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC + + + D H + C N + C CV+LS C+G +C +G DE
Sbjct: 1410 KDCPSGEDEQHCDR------GHTS--CRENDQFMCRQDGSCVSLSSMCNGVEECPDGSDE 1461
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 80/179 (44%), Gaps = 28/179 (15%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N C PN C N+C+ CD DC +G+DE + CT QF C G+CI
Sbjct: 1146 NRATCSPNNFEC-DDNKCIPKYWVCDLDRDCKDGKDEMNCTYSNCTETQFRCLNGRCISH 1204
Query: 221 SWKCDGFVDCLEDGSDE--------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
W+CDG DC D SDE PNTC ++ C CIP +W CD E DC
Sbjct: 1205 RWRCDGEDDC-RDSSDEQNCTKNIQPNTCRAD----EIVCKTDHSCIPTSWKCDGEPDCE 1259
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSK----KCIPHNWLCDEEMDCSTDDIVDNTDE 327
D DE C + Q C +K +CI +W CD + DC +D +DE
Sbjct: 1260 -----DGADEKDCSNMVCESWQFTCNNTKENGHRCIYKSWACDGDKDC-----IDGSDE 1308
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE------CTPGQFSCGMGKCIPES 221
++ C CV+LS C+G +C +G DE +E C G F C +C P +
Sbjct: 1432 DQFMCRQDGSCVSLSSMCNGVEECPDGSDELGCHTSELPATPSCYAGLFPCDDSRCFPLA 1491
Query: 222 WKCDGFVDCLEDGSDE 237
CDG DCL DG DE
Sbjct: 1492 ALCDGNRDCL-DGFDE 1506
>gi|328721377|ref|XP_003247287.1| PREDICTED: sortilin-related receptor-like [Acyrthosiphon pisum]
Length = 2166
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/355 (27%), Positives = 146/355 (41%), Gaps = 103/355 (29%)
Query: 105 DERLEKAGMHGENRSPLVTK-NIQWPSSLVIDYNQDILYW----------CDSHLNTVES 153
+ ++ +A + G + L++ +I+WP+ L +DY + LYW CD H N ++
Sbjct: 891 EAKVARANLDGSDVKTLISNDSIEWPNGLTVDYIAERLYWVDARHDYIASCDLHGNNIKK 950
Query: 154 V-------------------------------RVDGSHNA----------------VLCH 166
V D H A V H
Sbjct: 951 VIKNDEKVSHPFAVAVLKDWIYWDDWKQNSIFMSDKDHGAKIQTVSTHLPGLMDLKVYSH 1010
Query: 167 PNEL---RCGSSNQCVALSKFCDGKPD------CSNGEDEG-----------PFCNAEC- 205
+++ C ++N+C S FC G P+ C + + PF N C
Sbjct: 1011 MSQIDTNECSNNNKC---SHFCFGLPNQMFSCQCPDNMSKSDNSCLCPGLKEPFANGTCP 1067
Query: 206 TPGQ------FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ GQ F C G C+P+ W+CDG DC D SDE C QC + KCI
Sbjct: 1068 SAGQTCSVDYFQCANGNCVPKYWQCDGDNDC-GDNSDEVKCTKVSCGPNSFQCD-NGKCI 1125
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 319
P W CD + DC D++DE K+ C GQ +C + +CI +W CD E DC
Sbjct: 1126 PSYWTCDFDPDCE-----DSSDEINCKYSNCSVGQFRCK-NGRCISMHWHCDLEDDCH-- 1177
Query: 320 DIVDNTDE-DWDKYFSHNAVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE D ++++ C P+ C G++N C+ CDG+ DC G+DE
Sbjct: 1178 ---DGSDEVDCVNISNNSSTTCPPSSFHCPGTANTCIPAKWQCDGEKDCPEGKDE 1229
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 111/298 (37%), Gaps = 98/298 (32%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------AECTPGQFSC--GMGK 216
C + RC + +C+++ CD + DC +G DE N C P F C
Sbjct: 1151 CSVGQFRC-KNGRCISMHWHCDLEDDCHDGSDEVDCVNISNNSSTTCPPSSFHCPGTANT 1209
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW-----------LC 265
CIP W+CDG DC E G DE N I C + Q +CA +KKCI +W L
Sbjct: 1210 CIPAKWQCDGEKDCPE-GKDEINCGIDNCESWQFECA-NKKCIFASWKCDGDDDCNDGLK 1267
Query: 266 DEEMDCSTDD--------------IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
+E++CS+ I + T +W +C NG KCIP+ W CD
Sbjct: 1268 SDEVNCSSTTRPYPVEPTTPSLPFITNGTCSEW--LFRCSNG--------KCIPYWWKCD 1317
Query: 312 EEMDC------------------STDDIVDNTDEDWDKYFSHNAVLC------------- 340
MDC + IV + YF N LC
Sbjct: 1318 NVMDCEDGSDEEQCGTLTPTSPKTNTSIVTPKNMCPQHYFQCNNGLCIEDSWVCDEIFDC 1377
Query: 341 --------------------HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
+ E +C S C+++ K CDG P C + DE FC N
Sbjct: 1378 DQGEDETNCKNNNFVGRCKNNSREFKCRISGSCISIEKVCDGTPQCPDASDEM-FCTN 1434
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-------KCIPES 221
E +C S C+++ K CDG P C + DE N TPG SCGMG +CIP S
Sbjct: 1401 EFKCRISGSCISIEKVCDGTPQCPDASDEMFCTNNNQTPGTPSCGMGLFPCDGSRCIPAS 1460
Query: 222 WKCDGFVDCLEDGSDE 237
+C+ DC DG+DE
Sbjct: 1461 RRCNKHKDCY-DGTDE 1475
>gi|390341918|ref|XP_787599.3| PREDICTED: sortilin-related receptor [Strongylocentrotus purpuratus]
Length = 1346
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 103/231 (44%), Gaps = 39/231 (16%)
Query: 165 CHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P+E C S +QCV LS CD DC + DE C QF+C G+CIP +
Sbjct: 1123 CSPDEFHCKSGGSQCVPLSWECDHYDDCGDNSDEENCDFPTCNHDQFTCDNGRCIPMGFL 1182
Query: 224 CDGFVDCLEDGSDE--------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CD DC D SDE P T C + QC + +CIP WLCD E DC
Sbjct: 1183 CDLDNDCW-DNSDEKDCDITNIPTTMAAGCNDNFTQCEPNGRCIPTTWLCDGENDCGN-- 1239
Query: 276 IVDNTDEDWDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+WD+ + C + Q C + CIP W CD DC DN+DE
Sbjct: 1240 -------NWDEPPTQNCTANTCNSMQFTCQ-NGNCIPSYWQCDNYDDCG-----DNSDEQ 1286
Query: 329 -------WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ ++ + + C+ + C SS+ C+ + CDG DC +G DE
Sbjct: 1287 GCPSSTTYPQWTTSDPFNCNDGDFHCYSSDLCIPYNWKCDGYRDCEDGSDE 1337
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 144/328 (43%), Gaps = 70/328 (21%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGS----- 159
+R+E A + G +R L+ +N P S+ + +D++YW D S L+ + + G+
Sbjct: 935 DRIETAWLDGSHREVLLDQNTPHPFSIAV--YKDMIYWDDWSQLSIQSANKYTGANVRTV 992
Query: 160 -------------HNAVLCHPN---ELRCGSSNQCV---------ALSKFC--------- 185
HNA N + G ++ C+ A+++ C
Sbjct: 993 VAGLDSAMDLKIFHNASQQGVNPCSQNNGGCTHLCIVKPDASSPDAVTRVCLCPDDMKIV 1052
Query: 186 ---DGKPDCS--NGED---EGPFC---NAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
DG+ DC GE +C + C P QF C +CIP WKCD DC D
Sbjct: 1053 ITPDGREDCQCEAGEKLNLTTGYCMTQGSTCNPDQFQCLDSDRCIPSFWKCDHESDC-AD 1111
Query: 234 GSDEPNTCIHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
GSDE N + C + C + +C+P +W CD DC DN+DE+ F C +
Sbjct: 1112 GSDELNCPYYTCSPDEFHCKSGGSQCVPLSWECDHYDDCG-----DNSDEENCDFPTCNH 1166
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---DWDKYFSHNAVLCHPNELRCGS 349
Q C + +CIP +LCD + DC DN+DE D + A C+ N +C
Sbjct: 1167 DQFTCD-NGRCIPMGFLCDLDNDC-----WDNSDEKDCDITNIPTTMAAGCNDNFTQCEP 1220
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCN 377
+ +C+ + CDG+ DC N DE P N
Sbjct: 1221 NGRCIPTTWLCDGENDCGNNWDEPPTQN 1248
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ A M G+N + LVT I WP+ L ID ++W D+H + +E+ +DGSH VL
Sbjct: 894 IATAHMDGQNVTKLVTTGIYWPNGLTIDDQSSHIFWTDAHFDRIETAWLDGSHREVLLDQ 953
Query: 168 N 168
N
Sbjct: 954 N 954
>gi|443729223|gb|ELU15207.1| hypothetical protein CAPTEDRAFT_219450 [Capitella teleta]
Length = 2271
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 97/212 (45%), Gaps = 20/212 (9%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
C N CV+ + CDG DC + DE G + C+PG + C G CI E KC+G
Sbjct: 1335 FHCSDGNHCVSYYQVCDGYADCPDATDEDGCGTTPASPCSPGFWQCRNGMCIHEHLKCNG 1394
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+CL+ +E + C +C S CIP WLCD +MDC + + N + ++
Sbjct: 1395 RPECLDRSDEETCPTVFPCPEDHFRCVES--CIPMAWLCDGDMDCISGEDERNCN---NQ 1449
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------DWDKYFSHNAVLC 340
+ C + +C S CIP + +CD C D TDE S C
Sbjct: 1450 TNVCAANEFKCYRSSGCIPQSMVCDGYFQCP-----DQTDEIGCPAGSTPPLISPTPSTC 1504
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +E C C++LS+ C+G +C +G DE
Sbjct: 1505 YWDEFNC-QDGTCISLSQVCNGAINCLSGYDE 1535
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 108/229 (47%), Gaps = 33/229 (14%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
VD S N C P++ CG+ +CV S CD DC + DE EC+ QF+CG G
Sbjct: 1105 VDASVNGT-CSPDQFSCGN-GRCVLKSWKCDLDNDCGDNSDELDCPYHECSENQFTCGNG 1162
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CIP W+CD DC +DGSDE + C++ C G+ C + +CI W CD + DC
Sbjct: 1163 HCIPIRWQCDHDNDC-DDGSDESDGCVYPSCSPGEFGCN-NGRCIMEGWRCDGDNDCH-- 1218
Query: 275 DIVDNTDEDWDKFH----QCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
DN+DE+ H C + QC S CI W+CD + DC + +DE
Sbjct: 1219 ---DNSDEEGCGTHPNSTTCSANEYQCEGESSHCISKLWVCDGDRDC-----LGGSDE-- 1268
Query: 330 DKYFSHNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
SH P+ + C + +C+ S CDG DC + DE
Sbjct: 1269 ----SHCNSTVSPSHCDDVYKFEC-PNGRCIYRSWLCDGDNDCGDWGDE 1312
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 116/310 (37%), Gaps = 74/310 (23%)
Query: 107 RLEKAGMHGENRSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR-VDGS---- 159
R+ +A M GE+ LV NI WP+ L +D +D LY D + N + + +DGS
Sbjct: 912 RVMRAWMTGEHNKTLVQGVTNIVWPNGLALDDQRDRLYITDGYRNQINYINLIDGSFHVL 971
Query: 160 -HNAVLCHP-----------------NELRCGSSNQCVALSKFCDGK------------- 188
++A + HP N + + + + F D +
Sbjct: 972 ANSAAIAHPYAISVYKDNLYWTDWSKNAISTANKDLGFPIETFLDVRNPMDLKIMHVASQ 1031
Query: 189 --PDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF 246
S+GE+ NA CT S M + E+ CL E IH+
Sbjct: 1032 QGDQSSSGENPCSHANAMCT----SLCMARPHNETTIMPVTRSCL---CSEDFYQIHKQP 1084
Query: 247 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306
+G +C C P + C D V+ T C Q C + +C+
Sbjct: 1085 SGNEECV----CFPGEIRINST--CVVDASVNGT---------CSPDQFSCG-NGRCVLK 1128
Query: 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+W CD + DC DN+DE Y C N+ CG+ + C+ + CD DC
Sbjct: 1129 SWKCDLDNDCG-----DNSDELDCPYHE-----CSENQFTCGNGH-CIPIRWQCDHDNDC 1177
Query: 367 SNGEDEGPFC 376
+G DE C
Sbjct: 1178 DDGSDESDGC 1187
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 17/94 (18%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP------------GQFS 211
+C NE +C S+ C+ S CDG C + DE C A TP +F+
Sbjct: 1452 VCAANEFKCYRSSGCIPQSMVCDGYFQCPDQTDEIG-CPAGSTPPLISPTPSTCYWDEFN 1510
Query: 212 CGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
C G CI S C+G ++CL G DE IH C
Sbjct: 1511 CQDGTCISLSQVCNGAINCLS-GYDE---SIHIC 1540
>gi|309269088|ref|XP_003084810.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like
[Mus musculus]
Length = 976
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
K C Q C +C+P W CD + DC D +DE C +E
Sbjct: 15 KVISCGPRQWACDSGDQCVPDFWHCDGQSDCR-----DGSDEA-----GCAPQKCQDSEF 64
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG 405
+C ++ C++ S CDG+ DC +G DEG C++ C C H C +P G +C C G
Sbjct: 65 QC-ATGACLSFSMVCDGREDCVDGSDEGGECSSSV-CSPGLCYHSCYQSPTGPVCVCAPG 122
Query: 406 --QNPNKTQCVDADECLIDGS--CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461
N C D +EC C QTC NT SY+C+C GY L PDG +C A
Sbjct: 123 FELESNGQICQDVNECQQPSGQPCSQTCINTEGSYICACHPGYLLGPDGHTCKATGAEPI 182
Query: 462 EPASIIF 468
SI F
Sbjct: 183 LLVSIEF 189
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ C P + C S +QCV CDG+ DC +G DE +C +F C G C+
Sbjct: 15 KVISCGPRQWACDSGDQCVPDFWHCDGQSDCRDGSDEAGCAPQKCQDSEFQCATGACLSF 74
Query: 221 SWKCDGFVDCLEDGSDE----------PNTCIHQCFN 247
S CDG DC+ DGSDE P C H C+
Sbjct: 75 SMVCDGREDCV-DGSDEGGECSSSVCSPGLCYHSCYQ 110
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E+AGM G +R LV + + P+S+ +D ++W D + + SV +DGS +++
Sbjct: 324 RIEQAGMDGSSRKILVNQGLGHPTSIALDQLSWKIFWSDEKFHCIGSVNLDGSGISMM 381
>gi|158287921|ref|XP_309795.4| AGAP010896-PA [Anopheles gambiae str. PEST]
gi|157019420|gb|EAA05574.4| AGAP010896-PA [Anopheles gambiae str. PEST]
Length = 1348
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 103/225 (45%), Gaps = 31/225 (13%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPES 221
V C +E RC +N C+ CD + DC +G DE N C F+C GKCI ++
Sbjct: 1132 VECKADEFRCNVTNACLPNQWRCDTEKDCPDGSDEANCNNNTCESWMFTCVSDGKCIYKT 1191
Query: 222 WKCDGFVDCLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W+CDG DC + + +P I +C + +C + +C+P+ W CD DC D
Sbjct: 1192 WQCDGAADCKDAPTKKPGINIKPGQECHDWMFKCN-NDRCVPYWWKCDGVNDCE-----D 1245
Query: 279 NTDEDW-----------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
++DE K C + +C S CIP ++CD DC E
Sbjct: 1246 HSDEQGCGEQGPSTPPRRKDRTCGLHEFRCD-SGSCIPKRFVCDSYSDCPRG-------E 1297
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + SH LC N RC + C+ + +FC+G DC +G DE
Sbjct: 1298 DEENCPSHK--LCSNNNFRCRTDGMCLPMDRFCNGISDCVDGSDE 1340
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ C QC+ CD DC +G DE C +F+C G+CI W C
Sbjct: 1050 CPPHMFTCKLDQQCIPKHYLCDFDRDCKDGSDEENCKTPNCKTNEFTCDNGRCIKLGWMC 1109
Query: 225 DGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC DGSDE N + +C + +C ++ C+P+ W CD E DC D
Sbjct: 1110 DGEDDC-RDGSDEKDCQKKNATLVECKADEFRCNVTNACLPNQWRCDTEKDCP-----DG 1163
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS---TDDIVDNTDEDWDKYFSHN 336
+DE + C + C KCI W CD DC T N +
Sbjct: 1164 SDEANCNNNTCESWMFTCVSDGKCIYKTWQCDGAADCKDAPTKKPGINIKPGQE------ 1217
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CH +C ++++CV CDG DC + DE
Sbjct: 1218 ---CHDWMFKC-NNDRCVPYWWKCDGVNDCEDHSDE 1249
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHN 262
C P F+C +C+P+ +KCDG DC D SDE C C L ++CIP +
Sbjct: 1009 CGPKFFNCNNTRCVPQMYKCDGEDDC-GDRSDEEGCPAAKPACPPHMFTCKLDQQCIPKH 1067
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+LCD + DC D +DE+ K C + C + +CI W+CD E DC
Sbjct: 1068 YLCDFDRDCK-----DGSDEENCKTPNCKTNEFTCD-NGRCIKLGWMCDGEDDCR----- 1116
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
D +DE + + V C +E RC +N C+ CD + DC +G DE CNN
Sbjct: 1117 DGSDEKDCQKKNATLVECKADEFRCNVTNACLPNQWRCDTEKDCPDGSDEAN-CNN 1171
>gi|327276194|ref|XP_003222855.1| PREDICTED: sortilin-related receptor-like [Anolis carolinensis]
Length = 2139
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S CV LS CD + DC + DE +C +FSC G C+ SWKCDG
Sbjct: 1047 TQFRCHESGTCVPLSYKCDLEDDCGDNSDESHCEAHQCRSDEFSCNSGMCVRLSWKCDGD 1106
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1107 NDC-RDWSDEANCTAVYHTCETSSFQCH-NGHCIPQRWACDGDADCQ-----DGSDEDPT 1159
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
NG QC + CIP + C+ DCS D +DE H LC +
Sbjct: 1160 NCETKCNG-FQCP-NGTCIPSSKRCNGAHDCS-----DGSDEQ------HCEPLCTRYMD 1206
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1207 FVCKNRQQCLLRSMVCDGTVHCRDGSDEDP 1236
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 154/389 (39%), Gaps = 84/389 (21%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+R+E+ +G RS ++ ++ P ++ + N+ +YW D S L+ + + GS L
Sbjct: 867 DRIERVDFNGMQRS-VILDSLPHPYAIAVFKNE--IYWNDWSQLSIFRASKHSGSRMETL 923
Query: 165 C-HPNEL---------RCGSSNQCVA-------LSKFCDGKP-DCSNGEDEGPFCNAE-- 204
H N + + N CVA L K + + C G E
Sbjct: 924 VDHLNGVMDMKIFYRGKTSGQNACVAKPCSLLCLPKLNNSRSCKCPEGVSSHVLSTGEVK 983
Query: 205 --------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
C P Q+ C G CI W+CD DC D SDE N
Sbjct: 984 CDCPPGYLLKNSSCVKEDNTCLPSQYRCSNGNCINSIWQCDNDNDC-GDMSDEKNCPTTM 1042
Query: 245 C-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C + Q +C S C+P ++ CD E DC DN+DE + HQC + + C S C
Sbjct: 1043 CDADTQFRCHESGTCVPLSYKCDLEDDCG-----DNSDESHCEAHQCRSDEFSCN-SGMC 1096
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCD 361
+ +W CD + DC DW + AV C + +C + C+ CD
Sbjct: 1097 VRLSWKCDGDNDC----------RDWSDEANCTAVYHTCETSSFQC-HNGHCIPQRWACD 1145
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI 421
G DC +G DE P N + C +C P G C P+ +C A +C
Sbjct: 1146 GDADCQDGSDEDP-TNCETKCNGFQC-------PNGT-CI------PSSKRCNGAHDC-S 1189
Query: 422 DGSCDQTCT---NTHLSYVCSCTEGYTLR 447
DGS +Q C ++ +VC + LR
Sbjct: 1190 DGSDEQHCEPLCTRYMDFVCKNRQQCLLR 1218
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 97/224 (43%), Gaps = 44/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1263 CISLVWKCDGMDDCGDYSDEANCENPTEAPNCSRYYQFQCDNGHCIPNRWKCDEENDC-G 1321
Query: 233 DGSDE---------PNT--CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P T + C +C S CI ++W+CD DC+ D +D
Sbjct: 1322 DWSDEKVCGGSALVPVTTPALATCSPNHFRCN-SGICITNSWVCDGYQDCA-----DGSD 1375
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
ED +C + +C +KKCIP+ CD DC D DE
Sbjct: 1376 EDACPTSPVGATSPSAGSPGRCSRFEFECPSTKKCIPNWKRCDGLKDCQ-----DGMDEL 1430
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ +LC PN +C C+ +S+ CDG DCS+ DE
Sbjct: 1431 --NCPTHSTLLC-PNGFKCEDGETCIMMSERCDGFLDCSDSSDE 1471
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 118/313 (37%), Gaps = 82/313 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA---------ECTPGQFSCGMGKCIP 219
+ C + QC+ S CDG C +G DE P C F C G CI
Sbjct: 1206 DFVCKNRQQCLLRSMVCDGTVHCRDGSDEDPSYAGCSQDPEFHHTCDQFSFQCQNGVCIS 1265
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTD 274
WKCDG DC D SDE N T C Q QC + CIP+ W CDEE DC
Sbjct: 1266 LVWKCDGMDDC-GDYSDEANCENPTEAPNCSRYYQFQCD-NGHCIPNRWKCDEENDCG-- 1321
Query: 275 DIVDNTDEDW-----------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
D +DE C +C S CI ++W+CD DC+ D
Sbjct: 1322 ---DWSDEKVCGGSALVPVTTPALATCSPNHFRCN-SGICITNSWVCDGYQDCA-----D 1372
Query: 324 NTDEDWDKYFSHNAV--------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+DED A C E C S+ +C+ K CDG DC +G DE
Sbjct: 1373 GSDEDACPTSPVGATSPSAGSPGRCSRFEFECPSTKKCIPNWKRCDGLKDCQDGMDE--- 1429
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI------------DG 423
L C PT +C PN +C D + C++ D
Sbjct: 1430 ---------LNC-----PTHSTLLC-------PNGFKCEDGETCIMMSERCDGFLDCSDS 1468
Query: 424 SCDQTCTNTHLSY 436
S ++ CT+ L Y
Sbjct: 1469 SDERNCTDDTLVY 1481
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 81/200 (40%), Gaps = 33/200 (16%)
Query: 165 CHPNELRCGSSNQCVALS--KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C PN +C N C S K C G A C+P F C G CI SW
Sbjct: 1307 CIPNRWKCDEENDCGDWSDEKVCGGSALVPVTTP----ALATCSPNHFRCNSGICITNSW 1362
Query: 223 KCDGFVDCLEDGSDE---PNTCI----------HQCFNGQVQCALSKKCIPHNWLCDEEM 269
CDG+ DC DGSDE P + + +C + +C +KKCIP+ CD
Sbjct: 1363 VCDGYQDC-ADGSDEDACPTSPVGATSPSAGSPGRCSRFEFECPSTKKCIPNWKRCDGLK 1421
Query: 270 DCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------TDD- 320
DC D +D + C NG +C + CI + CD +DCS TDD
Sbjct: 1422 DC--QDGMDELNCPTHSTLLCPNG-FKCEDGETCIMMSERCDGFLDCSDSSDERNCTDDT 1478
Query: 321 -IVDNTDEDWDKYFSHNAVL 339
+ + W FS N L
Sbjct: 1479 LVYKVQNLQWTADFSGNISL 1498
>gi|321455007|gb|EFX66154.1| hypothetical protein DAPPUDRAFT_263601 [Daphnia pulex]
Length = 1422
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C + RC + C+ + CD DC +G DEG C+ CE C H C P P+G +
Sbjct: 678 CSEGDFRC-DNGHCIPMDSVCDEVLDCPDGTDEGDNCDTP--CEENFCEHNCVPGPKGPI 734
Query: 400 CFCPAGQNP--NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C+C AG N QCVD DECL + C Q C NT Y CSC GY L PD +C ++
Sbjct: 735 CYCEAGYRSENNGPQCVDIDECLSENRCSQYCANTEGDYDCSCVPGYYLEPDKYTCKVMD 794
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ AGM G R+ ++T ++ PS L +D ++W D L+ +ES +DGS VL
Sbjct: 222 IASAGMDGSKRTHIITTDVAQPSGLAVDEATGRIFWGDVQLSRIESSHIDGSDRKVL 278
>gi|148697968|gb|EDL29915.1| mCG120448, isoform CRA_a [Mus musculus]
Length = 2560
Score = 88.2 bits (217), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWK 223
C P E C S C+ CDG+ DC +G DE G C P +F+C G C + W+
Sbjct: 264 CGPQEASC-HSGHCIPRDYLCDGQEDCRDGSDELGCASPPPCEPNEFACENGHCALKLWR 322
Query: 224 CDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC ED +DE N + Q C QC + +CIP ++ CDEE DC D
Sbjct: 323 CDGDFDC-EDRTDEANCSVKQPGEVCGPTHFQCVSTNRCIPASFHCDEESDCP-----DR 376
Query: 280 TDE 282
+DE
Sbjct: 377 SDE 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Composition-based stats.
Identities = 67/258 (25%), Positives = 88/258 (34%), Gaps = 104/258 (40%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------- 197
+C E C S N+CVAL CD +PDC + DE
Sbjct: 177 VCTETEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVPELSSSTPAVGKVSPLPLW 236
Query: 198 -----------------------GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
GP + C P + SC G CIP + CDG DC DG
Sbjct: 237 PEAATTPPPPVTHGPQFLLPSVPGP---SACGPQEASCHSGHCIPRDYLCDGQEDC-RDG 292
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SD ++ CA C P+ + C+ NG
Sbjct: 293 SD------------ELGCASPPPCEPNEFACE-------------------------NGH 315
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
CAL W CD + DC D TDE + +C P +C S+N+C+
Sbjct: 316 --CALKL------WRCDGDFDCE-----DRTDEA-NCSVKQPGEVCGPTHFQCVSTNRCI 361
Query: 355 ALSKFCDGKPDCSNGEDE 372
S CD + DC + DE
Sbjct: 362 PASFHCDEESDCPDRSDE 379
Score = 40.0 bits (92), Expect = 2.4, Method: Composition-based stats.
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 32/121 (26%)
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
S CIP ++LCD + DC D +DE + C PNE C + + + L +
Sbjct: 273 SGHCIPRDYLCDGQEDCR-----DGSDE----LGCASPPPCEPNEFACENGHCALKLWR- 322
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC 419
C+ DCE+ CS G +C P QCV + C
Sbjct: 323 ----------------CDGDFDCEDRTDEANCSVKQPGEVC------GPTHFQCVSTNRC 360
Query: 420 L 420
+
Sbjct: 361 I 361
>gi|156392327|ref|XP_001636000.1| predicted protein [Nematostella vectensis]
gi|156223099|gb|EDO43937.1| predicted protein [Nematostella vectensis]
Length = 355
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 22/171 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPH 261
C P Q +C G+CI SW CDG DC +D SDE P+ H C + CA + C+P
Sbjct: 70 CDPSQHTCNNGQCIKASWLCDGASDC-QDNSDEMNCPSRSPHTCAWSEFTCA-NGACVPD 127
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
++ CD E DC+ D +DE + H C + +C + +CI + CD+E DD
Sbjct: 128 SFKCDGENDCA-----DGSDEK-NCAHTCSATEFRCN-NGRCITRAFRCDDE-----DDC 175
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DN+DE + +C ++ +CG+S +C+ SK CDGK DCS GEDE
Sbjct: 176 LDNSDEQ-----GCSRKVCRDDQFQCGTSRKCIRKSKICDGKSDCSGGEDE 221
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 83/186 (44%), Gaps = 41/186 (22%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------GPFCNAECTPGQFSC 212
+C ++ +CG+S +C+ SK CDGK DCS GEDE P +C Q C
Sbjct: 188 VCRDDQFQCGTSRKCIRKSKICDGKSDCSGGEDEKNCVKPQTPPPTPPLKPKCRISQRRC 247
Query: 213 GMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD----- 266
G C+ CDG DC DGSDE C + + C ++ CIP CD
Sbjct: 248 DNGSGCVDRMKICDGMRDCA-DGSDERGCGTVSCTHFEFSCK-NQACIPMVQRCDGVDNC 305
Query: 267 ----EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+EM CS+D I D H+C NG +C+ W+CD DD
Sbjct: 306 GDNSDEMSCSSDKIC-----DLSLNHKCRNG--------RCVVKGWVCD-----GFDDCG 347
Query: 323 DNTDED 328
DN+DE+
Sbjct: 348 DNSDEE 353
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 101/250 (40%), Gaps = 39/250 (15%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
S + C +E C ++ CV S CDG+ DC++G DE C C+ +F C G+CI
Sbjct: 106 SRSPHTCAWSEFTC-ANGACVPDSFKCDGENDCADGSDE-KNCAHTCSATEFRCNNGRCI 163
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+++CD DCL D SDE C + Q QC S+KCI + +CD + DCS +
Sbjct: 164 TRAFRCDDEDDCL-DNSDEQGCSRKVCRDDQFQCGTSRKCIRKSKICDGKSDCSGGEDEK 222
Query: 279 N------TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD------------- 319
N +C Q +C C+ +CD DC+
Sbjct: 223 NCVKPQTPPPTPPLKPKCRISQRRCDNGSGCVDRMKICDGMRDCADGSDERGCGTVSCTH 282
Query: 320 -----------------DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
D VDN ++ D+ + +C + + +CV CDG
Sbjct: 283 FEFSCKNQACIPMVQRCDGVDNCGDNSDEMSCSSDKICDLSLNHKCRNGRCVVKGWVCDG 342
Query: 363 KPDCSNGEDE 372
DC + DE
Sbjct: 343 FDDCGDNSDE 352
>gi|198413278|ref|XP_002119890.1| PREDICTED: similar to very low density lipoprotein receptor,
partial [Ciona intestinalis]
Length = 331
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 102/210 (48%), Gaps = 21/210 (10%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAEC-TPGQ-FSCGMGK-CIPESWK 223
+ RC ++ CV+ CDG+ DC + DE P N C T GQ F C GK CI +WK
Sbjct: 92 QFRC-NNGLCVSRRWLCDGEDDCKDNSDEDPTMCKNRPCNTTGQDFQCAHGKSCISSTWK 150
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC DGSDE + C + QC+ + +CI W CD EMDC D +DE
Sbjct: 151 CDGDRDC-SDGSDEVDCEQPTCLPSEFQCS-NHECITSRWRCDGEMDCE-----DESDEQ 203
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + +C+ ++CIP W CDE+ DC D +DE + +C
Sbjct: 204 GCPHKDCAANEFRCSSHQQCIPLPWKCDEDEDCE-----DGSDEQ--GCPARPTPVCPAG 256
Query: 344 ELRCGSS-NQCVALSKFCDGKPDCSNGEDE 372
C C+ + CDG+PDCS G DE
Sbjct: 257 YFSCQYGFPACIIKTWRCDGEPDCSGGSDE 286
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 93/200 (46%), Gaps = 20/200 (10%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-QFSCGMGKCIPESWKCDGFVDCLEDGS 235
C+ + CD + DC + DE N C QF C G C+ W CDG DC ++
Sbjct: 59 HCIWKAWRCDKENDCKDNSDEINCENKTCNATEQFRCNNGLCVSRRWLCDGEDDCKDNSD 118
Query: 236 DEPNTCIHQCFN--GQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
++P C ++ N GQ QCA K CI W CD + DCS D +DE + C
Sbjct: 119 EDPTMCKNRPCNTTGQDFQCAHGKSCISSTWKCDGDRDCS-----DGSDEVDCEQPTCLP 173
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ QC+ + +CI W CD EMDC DE ++ H C NE RC S Q
Sbjct: 174 SEFQCS-NHECITSRWRCDGEMDCE--------DESDEQGCPHKD--CAANEFRCSSHQQ 222
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ L CD DC +G DE
Sbjct: 223 CIPLPWKCDEDEDCEDGSDE 242
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 13/205 (6%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ +C C++ + CDG DCS+G DE C P +F C +CI W+CDG +
Sbjct: 135 DFQCAHGKSCISSTWKCDGDRDCSDGSDEVDCEQPTCLPSEFQCSNHECITSRWRCDGEM 194
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
DC ED SDE C + +C+ ++CIP W CDE+ DC +D D
Sbjct: 195 DC-EDESDEQGCPHKDCAANEFRCSSHQQCIPLPWKCDEDEDC--EDGSDEQGCPARPTP 251
Query: 289 QCFNGQVQCALS-KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
C G C CI W CD E DCS N S C ++ C
Sbjct: 252 VCPAGYFSCQYGFPACIIKTWRCDGEPDCSGGSDEHNC--------STVNTECRNDQFAC 303
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
+ C+ ++ C+G DC++G DE
Sbjct: 304 -DMHHCIDVNLVCNGVRDCNDGADE 327
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/194 (34%), Positives = 90/194 (46%), Gaps = 25/194 (12%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK-CIPHNWLCDE 267
+F C CI ++W+CD DC +D SDE N C ++ N Q + C+ WLCD
Sbjct: 52 KFLCDNQHCIWKAWRCDKENDC-KDNSDEIN-CENKTCNATEQFRCNNGLCVSRRWLCDG 109
Query: 268 EMDCSTDDIVDNTDEDWD--KFHQC-FNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
E DC DN+DED K C GQ QCA K CI W CD + DCS D
Sbjct: 110 EDDCK-----DNSDEDPTMCKNRPCNTTGQDFQCAHGKSCISSTWKCDGDRDCS-----D 159
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
+DE C P+E +C S+++C+ CDG+ DC + DE +
Sbjct: 160 GSDE-----VDCEQPTCLPSEFQC-SNHECITSRWRCDGEMDCEDESDEQGCPHKDCAAN 213
Query: 384 NLKCS--HKCSPTP 395
+CS +C P P
Sbjct: 214 EFRCSSHQQCIPLP 227
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP----GQFSC--GMGKCI 218
C NE RC S QC+ L CD DC +G DE C A TP G FSC G CI
Sbjct: 210 CAANEFRCSSHQQCIPLPWKCDEDEDCEDGSDE-QGCPARPTPVCPAGYFSCQYGFPACI 268
Query: 219 PESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
++W+CDG DC GSDE N T +C N Q C + CI N +C+ DC+
Sbjct: 269 IKTWRCDGEPDC-SGGSDEHNCSTVNTECRNDQFACDM-HHCIDVNLVCNGVRDCN 322
>gi|350419884|ref|XP_003492334.1| PREDICTED: sortilin-related receptor-like [Bombus impatiens]
Length = 2160
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 183 KFCDGKPDCSNGEDEGPFCNAEC-------TPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+ DGK C G PF N+ C P QF+C CIP SW+CD DC D S
Sbjct: 1065 EMIDGKCMCPGGIT--PFANSTCPRVASTCAPNQFACANDVCIPSSWRCDRDNDC-GDNS 1121
Query: 236 DEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
DE T H +C +CI +W+CD + DC D DE + QC Q
Sbjct: 1122 DELGCTSQHTTCTPNFECD-DNRCISKHWVCDFDHDCK-----DGKDEMNCNYPQCTESQ 1175
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPNELRCGSSNQ 352
+CA + +CI H W CD E DC D +DE K F C +E C
Sbjct: 1176 FRCA-NGRCISHRWRCDNENDCR-----DGSDEKNCSKKVFPGT---CRSDEFLCKKDGG 1226
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ S CDG+PDC NGEDE
Sbjct: 1227 CIPASWKCDGEPDCENGEDE 1246
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 112/280 (40%), Gaps = 80/280 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG----KCIPE 220
C +E C C+ S CDG+PDC NGEDE C QF+C + +CI
Sbjct: 1214 CRSDEFLCKKDGGCIPASWKCDGEPDCENGEDENECSEMVCEQWQFTCNVSHTKYRCIYS 1273
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ------------CFNGQVQCALSKKCIPHNWLCD-- 266
SW CDG DC DGSDE N Q C N C +KKC+P+ W CD
Sbjct: 1274 SWLCDGDKDC-ADGSDEVNCTTQQPPSLAPILPSSPCNNWMFMCN-NKKCVPYWWKCDSV 1331
Query: 267 -------EEMDCSTDDIVDNTDEDWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEE 313
+EM C +D+ E+W + C Q QC L+ CI +W+CD
Sbjct: 1332 DDCGDDSDEMGCGNEDV-----EEWTVVYPTEQAKVCREHQFQC-LNGDCIQDSWVCDGS 1385
Query: 314 MDCST-DDIVDNTDEDW-----DKYFSHNAVLCHP---------------NELRCGSSN- 351
DC++ +D + D D D++ C P +EL C
Sbjct: 1386 SDCTSGEDELHCGDSDQPSCREDQFTCRMDGSCIPIRSVCNGVEECPDGSDELGCSGEQH 1445
Query: 352 -------------------QCVALSKFCDGKPDCSNGEDE 372
+C L+ +CDGK DC +G DE
Sbjct: 1446 SSPAATPSCFFGLFPCDEIRCFPLASYCDGKQDCVDGFDE 1485
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 107/261 (40%), Gaps = 72/261 (27%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
N+C++ CD DC +G+DE +CT QF C G+CI W+CD DC DGS
Sbjct: 1142 NRCISKHWVCDFDHDCKDGKDEMNCNYPQCTESQFRCANGRCISHRWRCDNENDC-RDGS 1200
Query: 236 DEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
DE N C + F G + C CIP +W CD E DC + DE+ C
Sbjct: 1201 DEKN-CSKKVFPGTCRSDEFLCKKDGGCIPASWKCDGEPDCENGE-----DENECSEMVC 1254
Query: 291 FNGQVQCALSK---KCIPHNWLCDEEMDC------------------------------- 316
Q C +S +CI +WLCD + DC
Sbjct: 1255 EQWQFTCNVSHTKYRCIYSSWLCDGDKDCADGSDEVNCTTQQPPSLAPILPSSPCNNWMF 1314
Query: 317 ---------------STDDIVDNTD---------EDWD-KYFSHNAVLCHPNELRCGSSN 351
S DD D++D E+W Y + A +C ++ +C + +
Sbjct: 1315 MCNNKKCVPYWWKCDSVDDCGDDSDEMGCGNEDVEEWTVVYPTEQAKVCREHQFQCLNGD 1374
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
C+ S CDG DC++GEDE
Sbjct: 1375 -CIQDSWVCDGSSDCTSGEDE 1394
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCGMG 215
C ++ C C+ + C+G +C +G DE P C G F C
Sbjct: 1405 CREDQFTCRMDGSCIPIRSVCNGVEECPDGSDELGCSGEQHSSPAATPSCFFGLFPCDEI 1464
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN 239
+C P + CDG DC+ DG DE N
Sbjct: 1465 RCFPLASYCDGKQDCV-DGFDESN 1487
>gi|340729804|ref|XP_003403185.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein-like [Bombus
terrestris]
Length = 4435
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 30/283 (10%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C +G V C K C+P + LC+ +C D +DE+ R LN + +
Sbjct: 1737 CPHGYVACTRDKDCVPQSSLCNGVPECR-----DRSDEENCYGESRRLNLKTYPSEQLIK 1791
Query: 65 RNQSLCFI-QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
++ + F + + + R+R + N+L LP P ++ RLE + E+ +
Sbjct: 1792 ESREVVFQCRDEGLLRARVRWLRGNNL----PLP-PGSRDVNGRLEIPNIQLEHSGVYIC 1846
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSK 183
+ + +PSS+ Q + + TVE ++ C +E C S+ +C+ S
Sbjct: 1847 EAVGYPSSMP---GQQVSVYL-----TVEKFEPPPTNKPHACQYDEATC-SNGECIPKSY 1897
Query: 184 FCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE----PN 239
C+G+ DC++G DE C P QF C +C+ + W+CDG DC DGSDE PN
Sbjct: 1898 VCNGRLDCTDGSDEMRCSPHGCEPNQFRCNNTECVSKVWRCDGDKDCA-DGSDEEDCAPN 1956
Query: 240 TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C + C +CIP ++ CD E DC +D +DE
Sbjct: 1957 APGTPCRFTEFACGSHDQCIPKSYHCDLERDC-----IDGSDE 1994
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 104/225 (46%), Gaps = 27/225 (12%)
Query: 156 VDGS--HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+DGS H+ +C P E +C +S +C+A + CD C++G DE EC G+ C
Sbjct: 1564 LDGSDEHDCGVCTPAEWKC-ASGECIAEIERCDNVTHCADGSDE---IGCECPNGERPCD 1619
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
G CI +++ CD +DC DGSDE + T +C + C CIP + +CD
Sbjct: 1620 NGVCINKNFFCDNNIDC-HDGSDERDCNNVVTPPAECRADEFTCR-DGTCIPQSAVCDRR 1677
Query: 269 MDCSTDDIVDNTDEDWDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC +D D HQ C Q QCA + CI + C+ +DC D +DE
Sbjct: 1678 PDCPHED-------DEANCHQGCGKDQFQCA-NGNCIRADQQCNNFIDCD-----DGSDE 1724
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ D + C + C CV S C+G P+C + DE
Sbjct: 1725 NCDHNPPPVSDSCPHGYVACTRDKDCVPQSSLCNGVPECRDRSDE 1769
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 97/231 (41%), Gaps = 41/231 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----------PFCNA---------- 203
C P + +C + N+C+ CDG PDC + DE P +
Sbjct: 1476 CTPTQFKCVTGNKCIEGVYRCDGHPDCPDQSDEDCANETITHATPPISHVWPGETTERPR 1535
Query: 204 ECTPG-QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
EC P + C G+CI KCD DCL DGSDE + + C + +CA S +CI
Sbjct: 1536 ECDPSKEMRCKDGQCILLRRKCDNIFDCL-DGSDEHDCGV--CTPAEWKCA-SGECIAEI 1591
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD C+ D +DE +C NG+ C + CI N+ CD +DC
Sbjct: 1592 ERCDNVTHCA-----DGSDEIG---CECPNGERPCD-NGVCINKNFFCDNNIDCH----- 1637
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE C +E C C+ S CD +PDC + +DE
Sbjct: 1638 DGSDERDCNNVVTPPAECRADEFTC-RDGTCIPQSAVCDRRPDCPHEDDEA 1687
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 13/124 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C C+ S CD +PDC + +DE C+ C QF C G CI +C
Sbjct: 1655 CRADEFTC-RDGTCIPQSAVCDRRPDCPHEDDEA-NCHQGCGKDQFQCANGNCIRADQQC 1712
Query: 225 DGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ F+DC +DGSDE P C +G V C K C+P + LC+ +C D
Sbjct: 1713 NNFIDC-DDGSDENCDHNPPPVSDSCPHGYVACTRDKDCVPQSSLCNGVPECR-----DR 1766
Query: 280 TDED 283
+DE+
Sbjct: 1767 SDEE 1770
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSD 236
C++ S CDG +C EDE C ECTP QF C G KCI ++CDG DC D SD
Sbjct: 1450 CISKSAVCDGFDNCPRAEDE-LHCERECTPTQFKCVTGNKCIEGVYRCDGHPDC-PDQSD 1507
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNW---LCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
E C N + A I H W + +C D K +C +G
Sbjct: 1508 E------DCANETITHATPP--ISHVWPGETTERPREC-----------DPSKEMRCKDG 1548
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CI CD DC +D +DE H+ +C P E +C +S +C
Sbjct: 1549 Q--------CILLRRKCDNIFDC-----LDGSDE-------HDCGVCTPAEWKC-ASGEC 1587
Query: 354 VALSKFCDGKPDCSNGEDE-GPFC-NNKADCENLKCSHK 390
+A + CD C++G DE G C N + C+N C +K
Sbjct: 1588 IAEIERCDNVTHCADGSDEIGCECPNGERPCDNGVCINK 1626
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN------AECTPGQFSCGMGKCIPE 220
PN R + C+ + FCD DC +G DE CN AEC +F+C G CIP+
Sbjct: 1612 PNGERPCDNGVCINKNFFCDNNIDCHDGSDERD-CNNVVTPPAECRADEFTCRDGTCIPQ 1670
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S CD DC + D+ C C Q QCA + CI + C+ +DC D +
Sbjct: 1671 SAVCDRRPDCPHE--DDEANCHQGCGKDQFQCA-NGNCIRADQQCNNFIDCD-----DGS 1722
Query: 281 DEDWDK-----FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DE+ D C +G V C K C+P + LC+ +C D +DE+
Sbjct: 1723 DENCDHNPPPVSDSCPHGYVACTRDKDCVPQSSLCNGVPECR-----DRSDEE 1770
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 98/203 (48%), Gaps = 21/203 (10%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
+RC ++ + + CDG DC +G+DE + C+PG+F+C + +CI +S +C+ D
Sbjct: 385 IRCRDGSRSICSVQQCDGVKDCDDGDDEDGCPHPGCSPGEFACDVSRCILDSQRCNFVQD 444
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
C +DGSDE + C Q +C + +CI C+ DC +D +DE +
Sbjct: 445 C-DDGSDEHDCNYPACTASQFKCG-NGQCIDSGGRCNNVEDC-----LDRSDE--LNCPR 495
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + +C L C+ CD DC D +DE + C ++ RC
Sbjct: 496 CRSDEFEC-LDGSCVSQTSRCDGRSDCR-----DRSDE-----INCTVTTCSGDQFRC-L 543
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
C+++ K C+ DC NGEDE
Sbjct: 544 DGTCISIDKRCNQNIDCRNGEDE 566
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
P H C + C+ + +CIP +++C+ +DC+ D +DE H C Q +C
Sbjct: 1873 PTNKPHACQYDEATCS-NGECIPKSYVCNGRLDCT-----DGSDEMRCSPHGCEPNQFRC 1926
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +C+ W CD + DC+ D +DE+ D + C E CGS +QC+ S
Sbjct: 1927 N-NTECVSKVWRCDGDKDCA-----DGSDEE-DCAPNAPGTPCRFTEFACGSHDQCIPKS 1979
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC +G DE
Sbjct: 1980 YHCDLERDCIDGSDE 1994
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 99/268 (36%), Gaps = 70/268 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS--------NGEDEGPF--------CNAECTPG 208
C P++ C S C+A K+CDG DC NG G + N+ C
Sbjct: 1312 CDPDQFVC-SDGTCIAADKWCDGYSDCPDYGDEFDCNGNTNGDYENGVNETEENSACPMW 1370
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---------------------QCFN 247
+F+C G CI + C+ DC EDG DE + + F
Sbjct: 1371 KFACD-GTCIDNIFVCNSVKDC-EDGLDEADCGMEGRNHNNPEEGARGDGFDETRLSVFA 1428
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTD---DIVDNTDEDWDKFH---QCFNGQVQCALSK 301
G L+ C ++ C++ S D DN D+ H +C Q +C
Sbjct: 1429 GGXPVDLA-PCPSMDFTCNDGSCISKSAVCDGFDNCPRAEDELHCERECTPTQFKCVTGN 1487
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDED----------------WDKYFSHNAVLCHPN-E 344
KCI + CD DC D +DED W + C P+ E
Sbjct: 1488 KCIEGVYRCDGHPDCP-----DQSDEDCANETITHATPPISHVWPGETTERPRECDPSKE 1542
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+RC QC+ L + CD DC +G DE
Sbjct: 1543 MRC-KDGQCILLRRKCDNIFDCLDGSDE 1569
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 97/266 (36%), Gaps = 59/266 (22%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDG-------------------SDEPNTCIH 243
A C P QF C G CI CDG+ DC + G ++E + C
Sbjct: 1310 ANCDPDQFVCSDGTCIAADKWCDGYSDCPDYGDEFDCNGNTNGDYENGVNETEENSACPM 1369
Query: 244 QCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDED---WDKFHQ-- 289
F A CI + ++C+ +E DC + N E+ D F +
Sbjct: 1370 WKF------ACDGTCIDNIFVCNSVKDCEDGLDEADCGMEGRNHNNPEEGARGDGFDETR 1423
Query: 290 --CFNGQVQCALSKKCIPHNWLCDEEMDCSTD---DIVDNTDEDWDKYFSHNAVLCHPNE 344
F G L+ C ++ C++ S D DN D+ H C P +
Sbjct: 1424 LSVFAGGXPVDLA-PCPSMDFTCNDGSCISKSAVCDGFDNCPRAEDEL--HCERECTPTQ 1480
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR---GAMCF 401
+C + N+C+ CDG PDC + DE DC N +H P G
Sbjct: 1481 FKCVTGNKCIEGVYRCDGHPDCPDQSDE--------DCANETITHATPPISHVWPGETTE 1532
Query: 402 CPAGQNPNK-TQCVDADECLIDGSCD 426
P +P+K +C D L+ CD
Sbjct: 1533 RPRECDPSKEMRCKDGQCILLRRKCD 1558
>gi|340719012|ref|XP_003397952.1| PREDICTED: sortilin-related receptor-like [Bombus terrestris]
Length = 2160
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 91/200 (45%), Gaps = 28/200 (14%)
Query: 183 KFCDGKPDCSNGEDEGPFCNAEC-------TPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+ DGK C G PF N+ C P QF+C CIP SW+CD DC D S
Sbjct: 1065 EMIDGKCMCPGGIT--PFANSTCPRVASTCAPNQFACANDVCIPSSWRCDRDNDC-GDNS 1121
Query: 236 DEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
DE T H +C +CI +W+CD + DC D DE + QC Q
Sbjct: 1122 DEVGCTSQHTTCTPNFECD-DNRCISKHWVCDFDHDCR-----DGKDEMNCNYPQCTESQ 1175
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKYFSHNAVLCHPNELRCGSSNQ 352
+CA + +CI H W CD E DC D +DE K F C +E C
Sbjct: 1176 FRCA-NGRCISHRWRCDNENDCR-----DGSDEKNCSKKVFPGT---CRSDEFLCKKDGG 1226
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ S CDG+PDC NGEDE
Sbjct: 1227 CIPASWKCDGEPDCENGEDE 1246
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 112/280 (40%), Gaps = 80/280 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG----KCIPE 220
C +E C C+ S CDG+PDC NGEDE C QF+C + +CI
Sbjct: 1214 CRSDEFLCKKDGGCIPASWKCDGEPDCENGEDENECSEMVCEQWQFTCNVSHTKYRCIYS 1273
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQ------------CFNGQVQCALSKKCIPHNWLCD-- 266
SW CDG DC DGSDE N Q C N C +KKC+P+ W CD
Sbjct: 1274 SWLCDGDKDC-ADGSDEVNCTTQQPPSLAPILPNSPCNNWMFMCN-NKKCVPYWWKCDSV 1331
Query: 267 -------EEMDCSTDDIVDNTDEDWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEE 313
+EM C +D+ E+W + C Q QC L+ CI +W+CD
Sbjct: 1332 DDCGDDSDEMGCGNEDV-----EEWTVVYPTEQAKVCREHQFQC-LNGDCIQDSWVCDGS 1385
Query: 314 MDCST-DDIVDNTDEDW-----DKYFSHNAVLCHP---------------NELRCGSSN- 351
DC++ +D + D D D++ C P +EL C
Sbjct: 1386 SDCTSGEDELHCGDSDQPSCREDQFTCRMDGACIPIRSVCNGVEECPDGSDELGCSGEQH 1445
Query: 352 -------------------QCVALSKFCDGKPDCSNGEDE 372
+C L+ +CDGK DC +G DE
Sbjct: 1446 FSPAATPSCFFGLFPCDEIRCFPLASYCDGKQDCVDGFDE 1485
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 102/222 (45%), Gaps = 32/222 (14%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCI 218
A C PN+ C +++ C+ S CD DC + DE C ++ CTP F C +CI
Sbjct: 1089 ASTCAPNQFAC-ANDVCIPSSWRCDRDNDCGDNSDEVG-CTSQHTTCTP-NFECDDNRCI 1145
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ W CD DC DG DE N QC Q +CA + +CI H W CD E DC D
Sbjct: 1146 SKHWVCDFDHDC-RDGKDEMNCNYPQCTESQFRCA-NGRCISHRWRCDNENDCR-----D 1198
Query: 279 NTDEDWDKFHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
+DE + + F G + C CIP +W CD E DC + + E
Sbjct: 1199 GSDEK-NCSKKVFPGTCRSDEFLCKKDGGCIPASWKCDGEPDCENGEDENECSE------ 1251
Query: 334 SHNAVLCHPNELRCGSSN---QCVALSKFCDGKPDCSNGEDE 372
++C + C S+ +C+ S CDG DC++G DE
Sbjct: 1252 ----MVCEQWQFTCNVSHTKYRCIYSSWLCDGDKDCADGSDE 1289
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 107/261 (40%), Gaps = 72/261 (27%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
N+C++ CD DC +G+DE +CT QF C G+CI W+CD DC DGS
Sbjct: 1142 NRCISKHWVCDFDHDCRDGKDEMNCNYPQCTESQFRCANGRCISHRWRCDNENDC-RDGS 1200
Query: 236 DEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
DE N C + F G + C CIP +W CD E DC + DE+ C
Sbjct: 1201 DEKN-CSKKVFPGTCRSDEFLCKKDGGCIPASWKCDGEPDCENGE-----DENECSEMVC 1254
Query: 291 FNGQVQCALSK---KCIPHNWLCDEEMDC------------------------------- 316
Q C +S +CI +WLCD + DC
Sbjct: 1255 EQWQFTCNVSHTKYRCIYSSWLCDGDKDCADGSDEVNCTTQQPPSLAPILPNSPCNNWMF 1314
Query: 317 ---------------STDDIVDNTD---------EDWD-KYFSHNAVLCHPNELRCGSSN 351
S DD D++D E+W Y + A +C ++ +C + +
Sbjct: 1315 MCNNKKCVPYWWKCDSVDDCGDDSDEMGCGNEDVEEWTVVYPTEQAKVCREHQFQCLNGD 1374
Query: 352 QCVALSKFCDGKPDCSNGEDE 372
C+ S CDG DC++GEDE
Sbjct: 1375 -CIQDSWVCDGSSDCTSGEDE 1394
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 10/84 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCGMG 215
C ++ C C+ + C+G +C +G DE P C G F C
Sbjct: 1405 CREDQFTCRMDGACIPIRSVCNGVEECPDGSDELGCSGEQHFSPAATPSCFFGLFPCDEI 1464
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN 239
+C P + CDG DC+ DG DE N
Sbjct: 1465 RCFPLASYCDGKQDCV-DGFDESN 1487
>gi|410921810|ref|XP_003974376.1| PREDICTED: very low-density lipoprotein receptor-like [Takifugu
rubripes]
Length = 588
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 115/305 (37%), Gaps = 73/305 (23%)
Query: 186 DGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC 245
DG C +G DE C F+CG G+CI ++CDG C DGSDE T H C
Sbjct: 40 DGPARCEDGSDEQSCGQPSCGRDAFACGSGRCIALRFRCDGADQC-GDGSDE--TSCHNC 96
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-------KFHQCFNGQVQCA 298
C S +C+ LCD +DC+ D DE H C Q +C
Sbjct: 97 TG--FSCGPSGQCLTRTQLCDGRVDCA-----DGRDESRQVCGSVRPDPHTCKASQFRCG 149
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+C+PH W CD DC+ D +DE V C NE C +N
Sbjct: 150 -DGQCVPHTWRCDNSTDCT-----DGSDE----------VNCDQNE--CAVNNG------ 185
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDAD 417
CSH C G +C CP + QC + D
Sbjct: 186 ---------------------------GCSHHCKDLRMGFICECPRDMVLVGEYQCEEVD 218
Query: 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
CL CDQ C + CSC + Y + P C A + E A+++ +S+ +R
Sbjct: 219 PCLDADVCDQVCVPVNGRITCSCHQDYKMSPTTGECKA----KGEKAAVVVTSSEGLRWA 274
Query: 478 HLNGS 482
L G
Sbjct: 275 SLGGG 279
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNA------ECTPGQFSCGMGKCIPESWKC 224
CG S QC+ ++ CDG+ DC++G DE C + C QF CG G+C+P +W+C
Sbjct: 101 CGPSGQCLTRTQLCDGRVDCADGRDESRQVCGSVRPDPHTCKASQFRCGDGQCVPHTWRC 160
Query: 225 DGFVDCLEDGSDEPN 239
D DC DGSDE N
Sbjct: 161 DNSTDC-TDGSDEVN 174
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG-MGKCIPESWK 223
C + CGS +C+AL CDG C +G DE N CT FSCG G+C+ +
Sbjct: 59 CGRDAFACGS-GRCIALRFRCDGADQCGDGSDETSCHN--CT--GFSCGPSGQCLTRTQL 113
Query: 224 CDGFVDCLEDGSDEPNTC-------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CDG VDC DG DE H C Q +C +C+PH W CD DC+
Sbjct: 114 CDGRVDC-ADGRDESRQVCGSVRPDPHTCKASQFRCG-DGQCVPHTWRCDNSTDCT---- 167
Query: 277 VDNTDE 282
D +DE
Sbjct: 168 -DGSDE 172
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+AG+ G +R LVT ++ P +L +D + +LYW D T+ V +G H +
Sbjct: 399 KIERAGLDGRDRKALVTHLMRHPVALSLDLPRQLLYWMDQGTKTISRVNFEGRHRKTVVE 458
Query: 167 PNELRCGSSNQCVALSKF 184
N G +Q L+ F
Sbjct: 459 SN----GYLDQPFGLAVF 472
>gi|350584178|ref|XP_003481687.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like [Sus scrofa]
Length = 778
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 37/143 (25%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAM 399
C PNE C + C+ +S+ C+G DC++G DEGP C
Sbjct: 41 CQPNEHNCLGTELCILMSRLCNGIQDCADGSDEGPHCR---------------------- 78
Query: 400 CFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 79 ---------------DFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEP 123
Query: 460 QDEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 124 VDRPPVLLIANSQNILATYLSGA 146
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+ ++
Sbjct: 607 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 666
Query: 166 HPNEL 170
EL
Sbjct: 667 EGPEL 671
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 276 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTIIQ 335
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 14/63 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AEC------------TPGQF 210
C PNE C + C+ +S+ C+G DC++G DEGP C EC T G F
Sbjct: 41 CQPNEHNCLGTELCILMSRLCNGIQDCADGSDEGPHCRDFDECSVYGTCSQLCTNTDGSF 100
Query: 211 SCG 213
+CG
Sbjct: 101 TCG 103
>gi|62988931|gb|AAY24318.1| unknown [Homo sapiens]
Length = 223
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
++C+ L C +KC+ C+C G + C D DEC + G+C QTC NTH SY
Sbjct: 3 SNCQQLNCQYKCTMVRNSTRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYT 62
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
CSC EGY ++PD +SC A P D P ++ ++ I +LNGS
Sbjct: 63 CSCVEGYLMQPDNRSCKAKIEPTDRPPILLIANFETIEVFYLNGS 107
>gi|328702596|ref|XP_003241945.1| PREDICTED: low-density lipoprotein receptor-related protein 2-like
[Acyrthosiphon pisum]
Length = 870
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 100/335 (29%), Positives = 149/335 (44%), Gaps = 37/335 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C S+ +C+ CD +C + DE +C G F C G CI ++C
Sbjct: 165 CSESEFQC-SNGKCIPGQWRCDHDDNCGDNSDELNCGGFQCKNGTFQCKSGHCIASYFRC 223
Query: 225 DGFVDCLEDGSDE-------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
DG +C D SDE P C + +C +K C+ ++ +CD E DC D
Sbjct: 224 DGDRNC-RDFSDEIGCPPRYPED--RYCPKSKFECKTTKLCVFNSEICDGEDDCG--DGS 278
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY--FSH 335
D E + + C +K CIP CD D+ D +DE+ H
Sbjct: 279 DEASELCSNMSCTLDNRFSCD-NKHCIPMYQRCD-----GVDNCGDGSDENVLSVCGMIH 332
Query: 336 NAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC-ENLK--CSHKC 391
N C H E C ++ +C+ SK C+ + DC + DE C+ C E+ K C H C
Sbjct: 333 NIRQCDHYTEFTC-ANRECINKSKLCNLQYDCEDLSDE-KGCHYSGTCLESTKGGCEHYC 390
Query: 392 --SPTPRGAMCFCPAGQ--NPNKTQCVDADECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
+ +G C C AG N +C D DEC + C Q CTN + S++CSC EG+ L
Sbjct: 391 LNVTSGKGFSCACYAGYEIGENSKKCEDLDECQLGLHHCSQDCTNINGSFICSCREGFVL 450
Query: 447 RP-DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+C AV D +I++++ ++R N
Sbjct: 451 SDLFSGACKAV----DPMLTIVYTNGPELRGYESN 481
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 104/215 (48%), Gaps = 22/215 (10%)
Query: 173 GSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +N +C+ FCDGK DC +G DE P +C + C +CIP+ W CD DC
Sbjct: 90 GKTNYRCIPKWLFCDGKDDCRDGSDELPENCPKCQ-ADYQCKNNRCIPKRWLCDFENDCG 148
Query: 232 EDGSDEPNTC---IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
++ + + C C + QC+ + KCIP W CD + +C DN+DE
Sbjct: 149 DNSDESEDLCKGLYRHCSESEFQCS-NGKCIPGQWRCDHDDNCG-----DNSDELNCGGF 202
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
QC NG QC S CI + CD + +C +D+I D+Y C ++
Sbjct: 203 QCKNGTFQCK-SGHCIASYFRCDGDRNCRDFSDEIGCPPRYPEDRY-------CPKSKFE 254
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKA 380
C ++ CV S+ CDG+ DC +G DE C+N +
Sbjct: 255 CKTTKLCVFNSEICDGEDDCGDGSDEASELCSNMS 289
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG---KCIP 219
C P + +C+ CD DC + DE + CT G C +CIP
Sbjct: 39 CDPKSEFSCKNGRCIPKLWVCDFDNDCGDDSDEPAYMCRQRNCTTGWQRCPGKTNYRCIP 98
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CDG DC DGSDE +C QC + +CIP WLCD E DC DN
Sbjct: 99 KWLFCDGKDDC-RDGSDELPENCPKC-QADYQCK-NNRCIPKRWLCDFENDCG-----DN 150
Query: 280 TDEDWD----KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+DE D + C + QC+ + KCIP W CD + +C DN+DE +
Sbjct: 151 SDESEDLCKGLYRHCSESEFQCS-NGKCIPGQWRCDHDDNCG-----DNSDE-----LNC 199
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +C S C+A CDG +C + DE
Sbjct: 200 GGFQCKNGTFQC-KSGHCIASYFRCDGDRNCRDFSDE 235
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQD-ILYWCDSHLNTVESVRVDGSHNAVLC 165
+++ + M+G + LVT + +P+ L ID D LYW D+ LN +ES++ D + V+
Sbjct: 618 KIKMSWMNGSRQISLVTTRLHYPTGLTIDTAMDHSLYWVDTKLNVIESIKYDQKNRVVVI 677
Query: 166 HPNEL 170
L
Sbjct: 678 RGEHL 682
>gi|326679898|ref|XP_001920334.3| PREDICTED: LOW QUALITY PROTEIN: SCO-spondin [Danio rerio]
Length = 5002
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 168 NELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+E RC G S +C+ CD + DC +G DE C C P F C G C+P +CDG
Sbjct: 1373 SEFRCSGGSERCIPAVWVCDNEDDCGDGSDE--VCPITCPPEHFRCSGGACLPVELRCDG 1430
Query: 227 FVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DC D SDE P+T C +G+ +CA + +C+P + +CD MDC D++DE
Sbjct: 1431 HPDC-ADQSDEDFCPPSTPESGCPSGEFRCA-NGRCVPGHKVCDGRMDCG---FADDSDE 1485
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+D C + +C+ S +C+ CD DC D +DE +C
Sbjct: 1486 -YDCGVVCRQEEFRCS-SGRCVLFLHRCDGHDDCG-----DYSDE--------RGCVCAL 1530
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
EL+C +QCV+ + CDG DC +G DE
Sbjct: 1531 GELQC-PGDQCVSAERVCDGNRDCPSGIDE 1559
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNAECTPGQFSCGMGKCIPESWK 223
C E RC ++ +CV K CDG+ DC +D + C C +F C G+C+ +
Sbjct: 1452 CPSGEFRC-ANGRCVPGHKVCDGRMDCGFADDSDEYDCGVVCRQEEFRCSSGRCVLFLHR 1510
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE C+ C G++QC +C+ +CD DC + DE
Sbjct: 1511 CDGHDDC-GDYSDE-RGCV--CALGELQCP-GDQCVSAERVCDGNRDCPS-----GIDEL 1560
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + C S +C+P W CD E DC +D +DE + C +
Sbjct: 1561 ICPAKGCSQFEFGCT-SGQCVPLAWRCDGETDC-----LDGSDEK------RCSRTCQSD 1608
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S +QCV + CDG P+C + DE
Sbjct: 1609 QFLCQSGDQCVQYQQLCDGTPNCRDASDE 1637
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C EL+C +QCV+ + CDG DC +G DE C+ +F C G+C+P +W+
Sbjct: 1527 VCALGELQC-PGDQCVSAERVCDGNRDCPSGIDELICPAKGCSQFEFGCTSGQCVPLAWR 1585
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD 281
CDG DCL DGSDE C C + Q C +C+ + LCD +C ++D+ +DN D
Sbjct: 1586 CDGETDCL-DGSDE-KRCSRTCQSDQFLCQSGDQCVQYQQLCDGTPNCRDASDESLDNCD 1643
Query: 282 EDWDKFHQCFNGQVQ-------CALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ G + CA C+P N +C+ DC + D +
Sbjct: 1644 KVRPSAAPPSEGNISRICPEFTCA-DGSCVPFNTMCNGVSDCPGTEASDES 1693
>gi|190609992|tpe|CAJ44080.1| TPA: SCO-spondin precursor [Danio rerio]
Length = 4990
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 104/210 (49%), Gaps = 28/210 (13%)
Query: 168 NELRC-GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
+E RC G S +C+ CD + DC +G DE C C P F C G C+P +CDG
Sbjct: 1373 SEFRCSGGSERCIPAVWVCDNEDDCGDGSDE--VCPITCPPEHFRCSGGACLPVELRCDG 1430
Query: 227 FVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DC D SDE P+T C +G+ +CA + +C+P + +CD MDC D++DE
Sbjct: 1431 HPDC-ADQSDEDFCPPSTPESGCPSGEFRCA-NGRCVPGHKVCDGRMDCG---FADDSDE 1485
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+D C + +C+ S +C+ CD DC D +DE +C
Sbjct: 1486 -YDCGVVCRQEEFRCS-SGRCVLFLHRCDGHDDCG-----DYSDE--------RGCVCAL 1530
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
EL+C +QCV+ + CDG DC +G DE
Sbjct: 1531 GELQC-PGDQCVSAERVCDGNRDCPSGIDE 1559
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNAECTPGQFSCGMGKCIPESWK 223
C E RC ++ +CV K CDG+ DC +D + C C +F C G+C+ +
Sbjct: 1452 CPSGEFRC-ANGRCVPGHKVCDGRMDCGFADDSDEYDCGVVCRQEEFRCSSGRCVLFLHR 1510
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE C+ C G++QC +C+ +CD DC + DE
Sbjct: 1511 CDGHDDC-GDYSDE-RGCV--CALGELQCP-GDQCVSAERVCDGNRDCPS-----GIDEL 1560
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + C S +C+P W CD E DC +D +DE + C +
Sbjct: 1561 ICPAKGCSQFEFGCT-SGQCVPLAWRCDGETDC-----LDGSDEK------RCSRTCQSD 1608
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S +QCV + CDG P+C + DE
Sbjct: 1609 QFLCQSGDQCVQYQQLCDGTPNCRDASDE 1637
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 13/171 (7%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C EL+C +QCV+ + CDG DC +G DE C+ +F C G+C+P +W+
Sbjct: 1527 VCALGELQC-PGDQCVSAERVCDGNRDCPSGIDELICPAKGCSQFEFGCTSGQCVPLAWR 1585
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTD 281
CDG DCL DGSDE C C + Q C +C+ + LCD +C ++D+ +DN D
Sbjct: 1586 CDGETDCL-DGSDE-KRCSRTCQSDQFLCQSGDQCVQYQQLCDGTPNCRDASDESLDNCD 1643
Query: 282 EDWDKFHQCFNGQVQ-------CALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ G + CA C+P N +C+ DC + D +
Sbjct: 1644 KVRPSAAPPSEGNISRICPEFTCA-DGSCVPFNTMCNGVSDCPGTEASDES 1693
>gi|351710027|gb|EHB12946.1| Low-density lipoprotein receptor [Heterocephalus glaber]
Length = 894
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 105/230 (45%), Gaps = 33/230 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ + CDG+ +C +G DE A C PG FSCG + +CIP
Sbjct: 26 CARNEFQCWD-GKCISYTWVCDGRAECQDGSDESQETCMAATCKPGDFSCGGRLTRCIPS 84
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC +G+DE C + C +CI +LCD + DC +D +
Sbjct: 85 SWRCDGHEDC-NNGADEQGCPTRTCPEDEFHCQ-DGRCISQQFLCDGDRDC-----LDGS 137
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI--------VDNTDEDW- 329
DE C QC S CIP W CD + DCS +D+ D +DE W
Sbjct: 138 DEVTCSVTTCGPANFQCN-SSACIPQLWACDGDSDCSDGSDEWPQRCEGRDTDGSDE-WP 195
Query: 330 ------DKYFSHNA-VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + A C E C S +C+ S CDG DC + DE
Sbjct: 196 QRCEGRDTSAAQGANGPCSSLEFHC-RSGECIHSSWHCDGAHDCKDKSDE 244
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/298 (30%), Positives = 117/298 (39%), Gaps = 71/298 (23%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------- 199
+ C P +C SS C+ CDG DCS+G DE P
Sbjct: 143 SVTTCGPANFQCNSS-ACIPQLWACDGDSDCSDGSDEWPQRCEGRDTDGSDEWPQRCEGR 201
Query: 200 ------FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE-----------DGSDE----- 237
N C+ +F C G+CI SW CDG DC + DGSDE
Sbjct: 202 DTSAAQGANGPCSSLEFHCRSGECIHSSWHCDGAHDCKDKSDEEDCGEACDGSDEWPQRC 261
Query: 238 --PNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+T Q NG + C S +CI +W CD DC D +DE+ C
Sbjct: 262 EGRDTSAAQGANGPCSSLEFHCR-SGECIHSSWHCDGAHDCK-----DKSDEEDCVVATC 315
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGS 349
+ QCA CI + CD+E DC D +DE N LC PN+ +C
Sbjct: 316 RPDEFQCA-DGTCIHGSRQCDQEHDCR-----DQSDE----VGCINVTLCEGPNKFKC-H 364
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG 405
S +C+ L K C+ DC + DE +C N CSH C G C CP+G
Sbjct: 365 SGECITLDKVCNAARDCRDWSDEPLKECGTNECLDNNGGCSHICKDLKIGYQCLCPSG 422
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 103/254 (40%), Gaps = 53/254 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
A C P + CG +C+ S CDG DC+NG DE C +F C G+CI +
Sbjct: 64 AATCKPGDFSCGGRLTRCIPSSWRCDGHEDCNNGADEQGCPTRTCPEDEFHCQDGRCISQ 123
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+ CDG DCL DGSDE + C QC S CIP W CD + DCS D +
Sbjct: 124 QFLCDGDRDCL-DGSDEVTCSVTTCGPANFQCN-SSACIPQLWACDGDSDCS-----DGS 176
Query: 281 DEDW------------DKFHQCFNGQVQCAL---------------SKKCIPHNWLCDEE 313
DE W D++ Q G+ A S +CI +W CD
Sbjct: 177 DE-WPQRCEGRDTDGSDEWPQRCEGRDTSAAQGANGPCSSLEFHCRSGECIHSSWHCDGA 235
Query: 314 MDCSTD-------DIVDNTDEDW-------DKYFSHNA-VLCHPNELRCGSSNQCVALSK 358
DC + D +DE W D + A C E C S +C+ S
Sbjct: 236 HDCKDKSDEEDCGEACDGSDE-WPQRCEGRDTSAAQGANGPCSSLEFHC-RSGECIHSSW 293
Query: 359 FCDGKPDCSNGEDE 372
CDG DC + DE
Sbjct: 294 HCDGAHDCKDKSDE 307
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCALS-KKCIP 260
+C +F C GKCI +W CDG +C +DGSDE TC+ C G C +CIP
Sbjct: 25 KCARNEFQCWDGKCISYTWVCDGRAEC-QDGSDESQETCMAATCKPGDFSCGGRLTRCIP 83
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD DC+ + DE C + C +CI +LCD + DC
Sbjct: 84 SSWRCDGHEDCN-----NGADEQGCPTRTCPEDEFHCQ-DGRCISQQFLCDGDRDC---- 133
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE + + C P +C SS C+ CDG DCS+G DE P
Sbjct: 134 -LDGSDE-----VTCSVTTCGPANFQCNSS-ACIPQLWACDGDSDCSDGSDEWP 180
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A + ++L + + + W PA
Sbjct: 525 YWTDSVPGTVSVADTRGVKRRTLFQRKGSKPRGIVVDPVHGFMYWTDWGTPA-------- 576
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++EK G++G + LVT++I+WP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 577 KIEKGGLNGVDMYSLVTEDIEWPNGITLDLSSSRLYWVDSKLHSIFSIDVNGRNRKTILE 636
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 637 DEKQLAHPFSL 647
>gi|405973467|gb|EKC38182.1| Prolow-density lipoprotein receptor-related protein 1 [Crassostrea
gigas]
Length = 380
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 106/243 (43%), Gaps = 28/243 (11%)
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
++CIP +CDE +DC + + D C G +C S CI +C+ + D
Sbjct: 80 RRCIPSEVICDEVLDCQDGADEEKSRCDQTTITDCGEGLFECD-SGHCILELLVCNGQSD 138
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNE-------LRCGSSNQCVALSKFCDGKPDCSN 368
C+ D +DE + P+E C ++ QC+ S+ CDGK DC +
Sbjct: 139 CA-----DASDEGHQCGKIRVGLFSEPHERCRREGLFLCANNQQCLNTSRLCDGKSDCWD 193
Query: 369 GEDEGPFCNN---KADCENLKCSHKCSPTPRGAMCFC-PAGQNPNKTQCVDADECLIDGS 424
G DE C K +C + KC C +P GA C C P C+D DEC
Sbjct: 194 GSDEQGKCGENEAKTECSSNKCQQICEVSPEGAKCRCLPGYLTLQNRTCIDIDECKAAEP 253
Query: 425 --CDQTCTNTHLSYVCSCTEGYTLRPDGK-SCTAVNVPQDEPASIIFSSTVDIRRI---H 478
C C N SY CSC GY L +GK S A+ P +++ S V ++I H
Sbjct: 254 PICSHICQNFPGSYNCSCHHGYKLTDNGKCSINALG-----PNKVLYFSDVVHKKIYSSH 308
Query: 479 LNG 481
L+G
Sbjct: 309 LDG 311
>gi|25152990|ref|NP_500815.2| Protein RME-2 [Caenorhabditis elegans]
gi|351065612|emb|CCD61594.1| Protein RME-2 [Caenorhabditis elegans]
Length = 925
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 154/401 (38%), Gaps = 80/401 (19%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAE- 204
H+ + + +N+ E CG+ +C+ CD DC NG DE A
Sbjct: 15 HILIKNTAQAPAVNNSTCDQAKEFDCGNGRLRCIPAEWQCDNVADCDNGRDESGCSYAHH 74
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-------------------PNTCIH-- 243
C+ C G C+ +KCDG DC DGSDE P T +
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC-RDGSDEQHCEYNILKSRFDGSNPSAPTTFVGHN 133
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDK------FH------ 288
+C +++C S +CI + +CD DCS DD V+ T + FH
Sbjct: 134 GPECHPPRLRCR-SGQCIQPDLVCDGHTDCSGGDDEVNCTRRGHENMQSSTDFHDDVHLV 192
Query: 289 ----------QCFNGQVQCALSKKCIPHNWL---------CDEEMDCSTDDIVDNTDEDW 329
+C +G C CIP ++L +E +C T+ +
Sbjct: 193 DPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNCQTNAPSE------ 246
Query: 330 DKYFSHNAVLCH----PNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++Y S A H CG+ C+ ++ C+G +C G+DE C ++
Sbjct: 247 EEYLSGQADHMHSCSAAGMYSCGTKGSEIGVCIPMNATCNGIKECPLGDDESKHC---SE 303
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLSYVC 438
C +C H C TP GA C C G + C D DEC G C C + S+ C
Sbjct: 304 CARKRCDHTCMNTPHGARCICQEGYKLADDGLTCEDEDECATHGHLCQHFCEDRLGSFAC 363
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY L DG SC E + S ++R++ L
Sbjct: 364 KCANGYELETDGHSCKYETTTTPE-GYLFISLGGEVRQMPL 403
>gi|321445805|gb|EFX60770.1| hypothetical protein DAPPUDRAFT_18492 [Daphnia pulex]
Length = 202
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAE----CTPGQFSCGMGKCIPESWKCDGFVDCLED 233
C+ C+G DC+ GEDE N CT QF C G CI + CDG DC +D
Sbjct: 7 CIPAKYRCNGVNDCALGEDELQCRNTTTEVGCTSSQFQCKNGGCISIHFYCDGDADC-QD 65
Query: 234 GSDEPNTC-IHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQ 289
SDEP +C H C G+ C CIP + +CD + DC +D +DE
Sbjct: 66 KSDEPESCPSHVCLREGEYSCPNQHHCIPRSAVCDGQADC-----IDKSDEANCSSTHSM 120
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV---LCHPNELR 346
C + Q C+ S CIP W+CD + DC ED D N V LC N LR
Sbjct: 121 CSSTQFYCSHSHICIPLTWVCDRDSDC-------QHGEDEDSSVCDNVVNKPLCPLNYLR 173
Query: 347 CGSSNQCVALSKFCDGKPDCSNGED 371
C C+ C+ +C +G D
Sbjct: 174 CPQRPDCMPRMALCNSIAECEHGTD 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 216 KCIPESWKCDGFVDCL--EDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CIP ++C+G DC ED NT C + Q QC + CI ++ CD + DC
Sbjct: 6 SCIPAKYRCNGVNDCALGEDELQCRNTTTEVGCTSSQFQCK-NGGCISIHFYCDGDADCQ 64
Query: 273 TDDIVDNTDEDWD-KFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE H C G+ C CIP + +CD + DC +D +DE
Sbjct: 65 -----DKSDEPESCPSHVCLREGEYSCPNQHHCIPRSAVCDGQADC-----IDKSDE--- 111
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKAD-----CEN 384
S +C + C S+ C+ L+ CD DC +GEDE C+N +
Sbjct: 112 ANCSSTHSMCSSTQFYCSHSHICIPLTWVCDRDSDCQHGEDEDSSVCDNVVNKPLCPLNY 171
Query: 385 LKCSHKCSPTPRGAMC 400
L+C + PR A+C
Sbjct: 172 LRCPQRPDCMPRMALC 187
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGK-CIPESWKCD 225
E C + + C+ S CDG+ DC + DE ++ C+ QF C CIP +W CD
Sbjct: 83 EYSCPNQHHCIPRSAVCDGQADCIDKSDEANCSSTHSMCSSTQFYCSHSHICIPLTWVCD 142
Query: 226 GFVDCLEDGSDEPNTCIHQCFN------GQVQCALSKKCIPHNWLCDEEMDC 271
DC + G DE ++ N ++C C+P LC+ +C
Sbjct: 143 RDSDC-QHGEDEDSSVCDNVVNKPLCPLNYLRCPQRPDCMPRMALCNSIAEC 193
>gi|343160483|emb|CCD17864.1| low-density lipoprotein receptor-related protein-2 [Gallus gallus]
Length = 323
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 59/270 (21%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
C N+ +C + +C+ S CD + DC +G DE C C+ QF+C G+CIP ++
Sbjct: 71 TCEGNQFQCQTDGECIPHSWVCDDEEDCEDGSDEHQQCPGRTCSSQQFTCSNGQCIPSAY 130
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+CD DC DG+DE + +C Q+ CA + C + CD ++DC +T +
Sbjct: 131 RCDRVKDCT-DGTDERDCRYPRCE--QLSCA-NGACFNASQRCDGKVDCR------DTSD 180
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS-------- 334
+ + C + Q QCA + +CIP ++CD + DC D +DE+ Y +
Sbjct: 181 EANCTRGCASTQFQCA-NGECIPQAFMCDHDDDCG-----DRSDENSCTYATCRGNFFTC 234
Query: 335 ------HNAVL----------------------CHPNELRCGSSNQCVALSKFCDGKPDC 366
H + + C+P E C S C+ + K CDG DC
Sbjct: 235 PSGRCIHQSWICDGDDDCEDNEDERGCESSYHECYPGEWACPESGHCIPIGKVCDGAADC 294
Query: 367 SNGEDE-----GPFCNNKADCENLKCSHKC 391
GEDE G C N + C L C ++C
Sbjct: 295 PAGEDETNITAGRHC-NISHCAALSCQYRC 323
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 21/165 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F CG G+CIP W+CDG DC +D +DE C Q QC +CIPH+W+CD+E
Sbjct: 38 FRCGNGRCIPADWRCDGARDCSDD-TDEAGCPRPTCEGNQFQCQTDGECIPHSWVCDDEE 96
Query: 270 DCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + Q C+ + +CIP + CD DC+ D TDE
Sbjct: 97 DCE-----DGSDEHQQCPGRTCSSQQFTCS-NGQCIPSAYRCDRVKDCT-----DGTDER 145
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+Y + C ++ C S+ CDGK DC + DE
Sbjct: 146 DCRYPRCEQLSC--------ANGACFNASQRCDGKVDCRDTSDEA 182
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 106/268 (39%), Gaps = 46/268 (17%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q QC +CIPH+W+CD+E DC D +DE H
Sbjct: 72 CEGNQFQCQTDGECIPHSWVCDDEEDCE-----DGSDE-------------HQQCPGRTC 113
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK 124
+Q Q + S RC ++ D + D +P E+L A N S
Sbjct: 114 SSQQFTCSNGQCIPSA-YRCDRVKDCTDGTDERDCR-YPRCEQLSCANGACFNASQR--- 168
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
CD ++ ++ D ++ C + +C ++ +C+ +
Sbjct: 169 -------------------CDGKVDCRDT--SDEANCTRGCASTQFQC-ANGECIPQAFM 206
Query: 185 CDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH 243
CD DC + DE A C F+C G+CI +SW CDG DC ++ + + H
Sbjct: 207 CDHDDDCGDRSDENSCTYATCRGNFFTCPSGRCIHQSWICDGDDDCEDNEDERGCESSYH 266
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+C+ G+ C S CIP +CD DC
Sbjct: 267 ECYPGEWACPESGHCIPIGKVCDGAADC 294
>gi|432926786|ref|XP_004080924.1| PREDICTED: LOW QUALITY PROTEIN: SCO-spondin-like [Oryzias latipes]
Length = 5369
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/251 (31%), Positives = 102/251 (40%), Gaps = 61/251 (24%)
Query: 165 CHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCNAE-----CTPGQFSCGMGKC 217
C + RC S S C+ L+ CDG PDC++ DE FC C G+F C GKC
Sbjct: 1411 CSVEQFRCDSTPSGPCLNLALRCDGNPDCADRSDED-FCGPSLPMPLCPAGEFQCANGKC 1469
Query: 218 IPESWKCDGFVDC-LEDGSDEPN---------------TCIH------------------ 243
+ S CDG DC DGSDE + CI
Sbjct: 1470 LASSHVCDGRPDCGFADGSDEQDCGVVCNDGEFLCPGRRCILYLHRCDGHDDCGDFSDER 1529
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
C G+ QC + C+P + +CD DC TDE C + CA S
Sbjct: 1530 GCMCAPGEFQCPVG-NCVPAHRVCDGHRDCPA-----GTDEAVCPRKACRFNEFSCASSG 1583
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+C+P W CD E DC +D +DE LC + C S +QCV + CD
Sbjct: 1584 QCVPRAWRCDGESDC-----MDGSDEQ------DCGGLCGFGHVPCLSQDQCVHYLQLCD 1632
Query: 362 GKPDCSNGEDE 372
G P C +G DE
Sbjct: 1633 GTPHCKDGSDE 1643
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 98/214 (45%), Gaps = 31/214 (14%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC---GMGKCIPESWKCDGFVDC 230
++ +C+ CD + DC +G DE C + C+ QF C G C+ + +CDG DC
Sbjct: 1382 ATGRCIPSQWLCDNEDDCGDGSDE--ICPSTCSVEQFRCDSTPSGPCLNLALRCDGNPDC 1439
Query: 231 LEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
D SDE P+ + C G+ QCA + KC+ + +CD DC D +DE D
Sbjct: 1440 -ADRSDEDFCGPSLPMPLCPAGEFQCA-NGKCLASSHVCDGRPDCG---FADGSDEQ-DC 1493
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C +G+ C ++CI + CD DC D +DE +C P E +
Sbjct: 1494 GVVCNDGEFLCP-GRRCILYLHRCDGHDDCG-----DFSDE--------RGCMCAPGEFQ 1539
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C N CV + CDG DC G DE C KA
Sbjct: 1540 CPVGN-CVPAHRVCDGHRDCPAGTDEA-VCPRKA 1571
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 113/311 (36%), Gaps = 58/311 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWK 223
C NE C SS QCV + CDG+ DC +G DE C C G C +C+
Sbjct: 1572 CRFNEFSCASSGQCVPRAWRCDGESDCMDGSDEQD-CGGLCGFGHVPCLSQDQCVHYLQL 1630
Query: 224 CDGFVDCLEDGSDEP-NTC------IHQCFNGQVQCA----LSKKCIPHNWLCDEEMDC- 271
CDG C +DGSDE N C + N + C+ + C+ N +C+ DC
Sbjct: 1631 CDGTPHC-KDGSDESVNNCDKVLPAPPERTNTSISCSEYTCMDGTCVSFNSVCNSVEDCP 1689
Query: 272 --STDDIVDNTDE-------DWDKFHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDI 321
S + +TDE W + C ++S+ + PH D C I
Sbjct: 1690 DASLTALAGSTDEQSCRAWSSWGPWGPCSTSCGTGSMSRERSCPHG---DPLRHCRGQKI 1746
Query: 322 VDN--------TDEDWDKYFSHN--AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
D W + S + + C ++R S + C P SN
Sbjct: 1747 QHQPCFRTTCPVDGQWLSWVSWSNCSTPCGGVQVRQRSCTPPRYGGQDCSQLPGPSNLSV 1806
Query: 372 EGPFCNN----KADCENLKCSHKCSPTPRG---------------AMCFCPAGQNPNKT- 411
+ C +A C H C P P + C+CP GQ N
Sbjct: 1807 QIKPCPADGCVEARCPPNLVRHSCGPCPMSCAHISSGTSCDSPCFSGCWCPEGQAMNHMQ 1866
Query: 412 QCVDADECLID 422
QCV DEC+ +
Sbjct: 1867 QCVSPDECMCE 1877
>gi|410966496|ref|XP_003989769.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Felis catus]
Length = 4742
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 52/132 (39%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
G V C P+E C QC+ CDG+ DC NG DE GP C P +F+CG
Sbjct: 627 GIARPVPCGPHEAMC-HDGQCIPKDYICDGQEDCKNGSDELNCGP--PPPCEPNEFACGN 683
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 684 GHCALKLWHCDGDFDC-EDRTDEANCPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESD 742
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 743 CP-----DRSDE 749
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/255 (25%), Positives = 88/255 (34%), Gaps = 98/255 (38%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCS------NGEDEGPFCNA-------------- 203
+C E C S N+CVAL CD +PDC N E+E P ++
Sbjct: 547 VCTEAEFACHSHNECVALEYRCDRRPDCRDMSDELNCEEEVPAVSSVSPTLVETPPAVPW 606
Query: 204 --------------------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C P + C G+CIP+ + CDG DC ++GSDE
Sbjct: 607 LEATTIQQLPGTPAPQPLLPGIARPVPCGPHEAMCHDGQCIPKDYICDGQEDC-KNGSDE 665
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
N C C P+ + C G C
Sbjct: 666 LN------------CGPPPPCEPNEFAC---------------------------GNGHC 686
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
AL W CD + DC D TDE + +C P + RC S+N C+ S
Sbjct: 687 ALKL------WHCDGDFDCE-----DRTDEA-NCPAKRPEDVCGPTQFRCVSTNTCIPAS 734
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 735 FHCDEESDCPDRSDE 749
>gi|402853303|ref|XP_003891336.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Papio anubis]
Length = 4658
Score = 86.3 bits (212), Expect = 3e-14, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 544 GSVRPLPCGPQEAAC-RSGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 600
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 601 GHCALKLWRCDGDFDC-EDRTDEANCSTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESD 659
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 660 CP-----DRSDE 666
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCN--AECTPGQFSC 212
C E C S N+CVAL CD +PDC + DE P + E TP
Sbjct: 465 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEELVLGISPTVSLLMETTP--LPP 522
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
I L GS P C Q + C S CIP ++LCD + DC
Sbjct: 523 RPETAIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPRDYLCDGQEDCE 577
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 578 -----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-NC 625
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 626 STKRPEEVCGPTQFRCVSTNVCIPASFHCDEESDCPDRSDE 666
>gi|307171294|gb|EFN63219.1| Sortilin-related receptor [Camponotus floridanus]
Length = 2149
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 98/224 (43%), Gaps = 34/224 (15%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C N+ C +S C+ CDG DC + DE A C+P F C KCIP+
Sbjct: 1072 ASTCSSNQFACNNS-VCIPEFWKCDGDNDCGDNSDETNCNRATCSPTNFECDGNKCIPKY 1130
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------T 273
W CD DC +DG DE N C + S +CI H W CD E DC T
Sbjct: 1131 WVCDMDRDC-KDGKDEQNCTYANCTDQLRFKCDSGRCISHRWRCDGEDDCRDGSDERNCT 1189
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
++ NT C + + C CIP +W CD E DC D+ DE
Sbjct: 1190 RSVLPNT---------CRSDEFACKKDHSCIPTSWKCDGEPDCE-----DSEDER----- 1230
Query: 334 SHNAVLCHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDE 372
N+++C + C ++N +C+ S CDG DC +G DE
Sbjct: 1231 DCNSLVCESWQFTCNNTNTNQGHRCIYQSWACDGDKDCLDGSDE 1274
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 107/245 (43%), Gaps = 38/245 (15%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + C+ QF+C CIPE WKCDG DC D SDE N C +C KC
Sbjct: 1069 PRVASTCSSNQFACNNSVCIPEFWKCDGDNDC-GDNSDETNCNRATCSPTNFECD-GNKC 1126
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS- 317
IP W+CD + DC D DE + C + S +CI H W CD E DC
Sbjct: 1127 IPKYWVCDMDRDCK-----DGKDEQNCTYANCTDQLRFKCDSGRCISHRWRCDGEDDCRD 1181
Query: 318 -------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
T ++ NT C +E C + C+ S CDG+PDC + E
Sbjct: 1182 GSDERNCTRSVLPNT--------------CRSDEFACKKDHSCIPTSWKCDGEPDCEDSE 1227
Query: 371 DEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
DE CN+ CE+ + + + T +G C ++ D D+ +DGS + CT
Sbjct: 1228 DERD-CNSLV-CESWQFTCNNTNTNQGHRCIY-------QSWACDGDKDCLDGSDEFNCT 1278
Query: 431 NTHLS 435
T +S
Sbjct: 1279 ITTVS 1283
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 115/281 (40%), Gaps = 74/281 (26%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-QFSCGMGKCIP 219
N C P C N+C+ CD DC +G+DE A CT +F C G+CI
Sbjct: 1110 NRATCSPTNFEC-DGNKCIPKYWVCDMDRDCKDGKDEQNCTYANCTDQLRFKCDSGRCIS 1168
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
W+CDG DC DGSDE N + C + + C CIP +W CD E DC +D
Sbjct: 1169 HRWRCDGEDDC-RDGSDERNCTRSVLPNTCRSDEFACKKDHSCIPTSWKCDGEPDC--ED 1225
Query: 276 IVDNTD------EDW---------DKFHQCF---------------NGQVQCALS----- 300
D D E W ++ H+C + + C ++
Sbjct: 1226 SEDERDCNSLVCESWQFTCNNTNTNQGHRCIYQSWACDGDKDCLDGSDEFNCTITTVSPA 1285
Query: 301 --------------------KKCIPHNWLCDEEMDC--STDDIVDNTDEDWDK------- 331
KKC+P+ W CD DC ++D+I +++ D
Sbjct: 1286 LPPFILPTNSCNDWMFLCQNKKCVPYWWKCDSVDDCGDNSDEIGCHSEADGTSDSTLAPI 1345
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
Y + + +C ++ +C + + C+ + CDG DC +GEDE
Sbjct: 1346 YTTEESRICREHQFQCYNGD-CIENAWVCDGSNDCPSGEDE 1385
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 90/235 (38%), Gaps = 62/235 (26%)
Query: 161 NAVLCHPNELRCGSSN-----QCVALSKFCDGKPDCSNGEDE------------GPFC-- 201
N+++C + C ++N +C+ S CDG DC +G DE PF
Sbjct: 1233 NSLVCESWQFTCNNTNTNQGHRCIYQSWACDGDKDCLDGSDEFNCTITTVSPALPPFILP 1292
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
C F C KC+P WKCD DC D SDE
Sbjct: 1293 TNSCNDWMFLCQNKKCVPYWWKCDSVDDC-GDNSDEIG---------------------- 1329
Query: 262 NWLCDEEMDCSTDDI---VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
C E D ++D + T+E C Q QC + CI + W+CD DC
Sbjct: 1330 ---CHSEADGTSDSTLAPIYTTEES----RICREHQFQC-YNGDCIENAWVCDGSNDCP- 1380
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ ED +++ H C N + C CV LS C+G +C +G DE
Sbjct: 1381 ------SGED-EQHCEHTHASCRDNDQFMCRQDGSCVPLSYICNGITECPDGSDE 1428
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 62/171 (36%), Gaps = 39/171 (22%)
Query: 177 QCVALSKFCDGKPDCSNGEDE---------------GPFCNAE----CTPGQFSCGMGKC 217
+CV CD DC + DE P E C QF C G C
Sbjct: 1307 KCVPYWWKCDSVDDCGDNSDEIGCHSEADGTSDSTLAPIYTTEESRICREHQFQCYNGDC 1366
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCF----NGQVQCALSKKCIPHNWLCDEEMDCST 273
I +W CDG DC G DE + C H N Q C C+P +++C+ +C
Sbjct: 1367 IENAWVCDGSNDC-PSGEDEQH-CEHTHASCRDNDQFMCRQDGSCVPLSYICNGITECP- 1423
Query: 274 DDIVDNTDEDWDKFH--------QCFNGQVQCALSKKCIPHNWLCDEEMDC 316
D +DE + H CF G C +C P CD DC
Sbjct: 1424 ----DGSDELGCQPHDTSPPATPSCFVGLFPCD-ETRCFPLASYCDGHQDC 1469
>gi|449273871|gb|EMC83225.1| Sortilin-related receptor, partial [Columba livia]
Length = 1309
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ RC S C+ LS CD + DC + DE +C +FSC G CI SWKCDG
Sbjct: 1027 NQFRCQGSGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRSDEFSCSSGMCIRLSWKCDGD 1086
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1087 NDC-RDWSDEVNCTAVSHTCEASSFQCQ-NGHCIPQRWACDGDTDCQ-----DGSDEDPA 1139
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG QC + CIP + CD DC+ D +DE H LC +
Sbjct: 1140 SCEKKCNG-FQCP-NGTCIPTSKHCDGINDCA-----DTSDE------QHCEPLCTRYMD 1186
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1187 FVCKNRQQCLFHSMVCDGIIQCQDGSDE 1214
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPGQFSCGMGKCIP 219
+ C + QC+ S CDG C +G DE P + C F C G CI
Sbjct: 1186 DFVCKNRQQCLFHSMVCDGIIQCQDGSDEDANYAGCSQDPEFHRTCDQFSFQCQNGVCIS 1245
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC 271
WKCDG DC D SDE N T C Q QC CIP W CDEE DC
Sbjct: 1246 LVWKCDGMDDC-GDYSDEANCENPTEAPNCSRYDQFQCG-HGHCIPSRWKCDEENDC 1300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 88/254 (34%), Gaps = 102/254 (40%)
Query: 157 DGSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG 213
D SH A C +E C SS C+ LS CDG DC + DE + C F C
Sbjct: 1055 DESHCEAHQCRSDEFSC-SSGMCIRLSWKCDGDNDCRDWSDEVNCTAVSHTCEASSFQCQ 1113
Query: 214 MGKCIPESWKCDGFVDCLEDGSDE-PNTC-----IHQCFNGQ------------------ 249
G CIP+ W CDG DC +DGSDE P +C QC NG
Sbjct: 1114 NGHCIPQRWACDGDTDC-QDGSDEDPASCEKKCNGFQCPNGTCIPTSKHCDGINDCADTS 1172
Query: 250 --------------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--------KF 287
C ++C+ H+ +CD + C D +DED + +F
Sbjct: 1173 DEQHCEPLCTRYMDFVCKNRQQCLFHSMVCDGIIQCQ-----DGSDEDANYAGCSQDPEF 1227
Query: 288 H--------QCFNG-------------------------------------QVQCALSKK 302
H QC NG Q QC
Sbjct: 1228 HRTCDQFSFQCQNGVCISLVWKCDGMDDCGDYSDEANCENPTEAPNCSRYDQFQCG-HGH 1286
Query: 303 CIPHNWLCDEEMDC 316
CIP W CDEE DC
Sbjct: 1287 CIPSRWKCDEENDC 1300
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF CG G CIP WKCD DC
Sbjct: 1243 CISLVWKCDGMDDCGDYSDEANCENPTEAPNCSRYDQFQCGHGHCIPSRWKCDEENDC-G 1301
Query: 233 DGSDE 237
D SDE
Sbjct: 1302 DWSDE 1306
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 109/292 (37%), Gaps = 70/292 (23%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+ ++ M G + +V++ ++WP+ + +D +YW +++++ +E V +G +V
Sbjct: 808 IYRSDMDGSSAGCIVSEGVRWPNGISVD--DHWIYWTEAYMDRIERVDFNGLQRSVILDS 865
Query: 164 LCHPNELRCGSS----NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
L HP + + N LS F K S E G+ + M I
Sbjct: 866 LPHPYAIAVFKNEIYWNDWSQLSIFRASKNSGSK---------MEILVGRLNGIMDMKIF 916
Query: 220 ESWKCDGFVDCLED--------GSDEPNTCIHQCFNGQVQCALSKKCI----PHNWL--- 264
K G C+ S+ +C +C G L + PH ++
Sbjct: 917 YRGKTTGENACIAKPCSLLCLPKSNHGRSC--KCPEGVSSTLLPTGEVKCDCPHGYVIKN 974
Query: 265 ---CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
EE C + ++CFNG CI W CD + DC
Sbjct: 975 NTCVKEENTCLPNQ------------YRCFNGN--------CINSIWQCDNDNDCE---- 1010
Query: 322 VDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C N+ RC S C+ LS CD + DC + DE
Sbjct: 1011 -DKSDEK-----NCPTTVCDAENQFRCQGSGTCIPLSYKCDLEDDCGDNSDE 1056
>gi|390364220|ref|XP_780093.3| PREDICTED: uncharacterized protein LOC445331 [Strongylocentrotus
purpuratus]
Length = 1925
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 102/243 (41%), Gaps = 49/243 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P++ RC S +C+ CD DCSNGEDE +C +F C G C+ + W C
Sbjct: 120 CPPDQTRC-QSGECIPDYWLCDQIDDCSNGEDEIGCSRTQCDKDEFKCSTGSCVTQDWLC 178
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST-- 273
DG VDCLE G DE C GQ +C + C+ + ++CD +E+DC
Sbjct: 179 DGHVDCLE-GEDEQACLTQTCPPGQFKCN-NDACVDNQYVCDGVHDCYFGEDELDCGGIP 236
Query: 274 -------------------DDIVDNT-----DEDWDKFHQCFNGQVQCALSKKCIPHNWL 309
+ I D T ED C N Q +C C+P + L
Sbjct: 237 ITEPCSGRYQCDDGRCIQLETICDGTYDCSYGEDEQDCFSCRNDQFECP-EGLCLPRSAL 295
Query: 310 CDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
CD E DC + +N V P + C S +C++ C+G+ DC G
Sbjct: 296 CDSEQDCRYGEDEENC----------AVVAACPGKFECSSDGRCLSYGFVCNGRVDCFGG 345
Query: 370 EDE 372
EDE
Sbjct: 346 EDE 348
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 110/239 (46%), Gaps = 36/239 (15%)
Query: 165 CHPNELRC--GSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPE 220
C NE+RC GS C+A +K CDG+ DC GEDE P G F C GKCI
Sbjct: 375 CRQNEIRCNVGSRVGCLAEAKVCDGRNDCLRGEDERNCPLVVPHDCGGDFRCDEGKCISR 434
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
S CD F+DC E G DE + + QC G QC + C+P + +CD ++DC+ D
Sbjct: 435 SRLCDRFIDCSE-GEDEEDCVMTQC-GGDFQC-MDGTCVPASLICDGQVDCA-----DGE 486
Query: 281 DE-DWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHN 336
DE + QC + ++ + +C+P CD +DC DE +
Sbjct: 487 DEVSCRELPQCDVDADLKMCSTGQCVPGEAFCDGWVDC-----YGAVDEAGCPESPSCRG 541
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------GPFCNNKADCENLKCS 388
LC ++ C+ ++ CDG DC +G DE P C + +C N +C+
Sbjct: 542 LFLCR--------TDYCLESTRICDGSFDCIDGRDETEVSCFTAPDCIDGFECNNGECT 592
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 99/233 (42%), Gaps = 36/233 (15%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
P E C N C++ CDG DC+ +DE E GQF C G+CIP + +C+G
Sbjct: 1412 PGEFTCSPGN-CISRIAVCDGIRDCAGNQDEYGCPVVEDCAGQFRCNSGECIPLTAQCNG 1470
Query: 227 FVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DC G D+ + C I C GQ +C+ + +C P + CD DC DE+
Sbjct: 1471 ISDCY--GKDDEDGCPIIEDC-TGQFKCS-NGECFPLDARCDGHQDC-----YHGEDEEA 1521
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCD----------EEMDCS----------TDDIVDN 324
C + + QC L C+P ++ CD +E DC D + D
Sbjct: 1522 CPISGCNSNEFQC-LDGSCLPASYRCDGLYEDCSLGEDETDCGPHSVCDRDQFQDYVCDG 1580
Query: 325 TDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
D + N+ C+ E C S CV + CDGK DC G DE P
Sbjct: 1581 RYRDCEDGEDENSCPSACNAYEYEC-ESGTCVPIQGMCDGKNDCPTGSDEIPL 1632
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 100/228 (43%), Gaps = 32/228 (14%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
N C++ +K CDG DC +GEDE CN C +F CG G CIP S C+G DC DG
Sbjct: 811 NSCISQNKVCDGNRDCYSGEDENN-CNTVC---EFQCGNGNCIPNSAVCNGVRDCY-DGE 865
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
DE + + NG +C CI + +CD DC D TDE + + G+
Sbjct: 866 DESSCPLTNPCNG-FRCD-DGTCIESSRVCDTYKDCP-----DRTDEQNCESEEICPGKF 918
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C + CI ++CD DCS D+ C E C + C+
Sbjct: 919 NCQ-TGFCIELRYICDGRQDCSN---------GLDESSCPINEGCDSTEFTC-YNGHCIG 967
Query: 356 LSKFCDGKPDCSNGEDEG---PFCNNKADCENLKCSHKCSPTPRGAMC 400
+ CDG PDCS GEDE C N+ +C C PR +C
Sbjct: 968 GNNVCDGIPDCSAGEDEEKCPAGCGNEFECGRGNC------IPRSFIC 1009
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 30/236 (12%)
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
++ Y CD + + C E C + C+ CDG PDCS GEDE
Sbjct: 1273 ELRYICDGRQDCSNGLDESSCPINERCDSTEFTC-YNGHCIGGDNVCDGIPDCSAGEDE- 1330
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSK 256
C A C +F CG G CIP S+ C+G +DC DG DE N C +C +G
Sbjct: 1331 EKCPAGCG-NEFECGRGNCIPRSFICNGRLDC-SDGEDEVGCNRCEFECDDG-------- 1380
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CI +CD DCS + N D+ G+ C+ CI +CD DC
Sbjct: 1381 SCIEATKICDSTQDCSRGEDELNCPIIGDQCP----GEFTCS-PGNCISRIAVCDGIRDC 1435
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + D+Y C + RC +S +C+ L+ C+G DC +DE
Sbjct: 1436 AG---------NQDEYGCPVVEDC-AGQFRC-NSGECIPLTAQCNGISDCYGKDDE 1480
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 107/269 (39%), Gaps = 52/269 (19%)
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDG 187
P S + D QD Y D V V P + C S +C++ C+G
Sbjct: 290 LPRSALCDSEQDCRYGEDEENCAV-----------VAACPGKFECSSDGRCLSYGFVCNG 338
Query: 188 KPDCSNGEDEGPFCNAECTPGQ-------------------FSCGMGK---CIPESWKCD 225
+ DC GEDE + P Q C +G C+ E+ CD
Sbjct: 339 RVDCFGGEDERGCISQPTQPTQPTHPTRPTQPTQPTCRQNEIRCNVGSRVGCLAEAKVCD 398
Query: 226 GFVDCL--EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
G DCL ED + P H C G +C KCI + LCD +DCS + DE+
Sbjct: 399 GRNDCLRGEDERNCPLVVPHDC-GGDFRCD-EGKCISRSRLCDRFIDCS-----EGEDEE 451
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
QC G QC + C+P + +CD ++DC+ D DE + V
Sbjct: 452 DCVMTQC-GGDFQC-MDGTCVPASLICDGQVDCA-----DGEDEVSCRELPQCDV---DA 501
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+L+ S+ QCV FCDG DC DE
Sbjct: 502 DLKMCSTGQCVPGEAFCDGWVDCYGAVDE 530
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N RC C+ S+ CD DC + DE + E PG+F+C G CI + CDG
Sbjct: 877 NGFRC-DDGTCIESSRVCDTYKDCPDRTDEQNCESEEICPGKFNCQTGFCIELRYICDGR 935
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC +G DE + I++ + + CI N +CD DCS ED +K
Sbjct: 936 QDC-SNGLDESSCPINEGCDSTEFTCYNGHCIGGNNVCDGIPDCS-------AGEDEEKC 987
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+ +C CIP +++C+ +DCS D DE V C+ E C
Sbjct: 988 PAGCGNEFECGRG-NCIPRSFICNGRLDCS-----DGEDE----------VGCNRCEFEC 1031
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
C+ ++ CD DCS GEDE
Sbjct: 1032 -DDGSCIEAARICDNTQDCSRGEDE 1055
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 95/206 (46%), Gaps = 24/206 (11%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+ RC +S +C+ L+ C+G DC +DE E PGQ+ C G+CIP +C+G
Sbjct: 1107 QFRC-NSGECIPLTARCNGISDCYGRDDEDGCPIIEDCPGQYKCSDGQCIPLRARCNGIR 1165
Query: 229 DCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC + G DE C C +G V + CIP++ +C+ DC D DE
Sbjct: 1166 DCYQ-GEDEAGGCQISSPCSDGFV--CDAGNCIPNSTVCNGVRDC-----YDGEDESSCP 1217
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
NG +C CI + +CD DC D TDE + +C P +
Sbjct: 1218 LTNPCNG-FRCD-DGTCIESSRVCDTYKDCP-----DRTDEQN----CESEEIC-PGKFN 1265
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C+ L CDG+ DCSNG DE
Sbjct: 1266 C-QTGFCIELRYICDGRQDCSNGLDE 1290
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 77/177 (43%), Gaps = 30/177 (16%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+ C P Q C G+CIP+ W CD DC +G DE QC + +C+ + C+ +
Sbjct: 118 STCPPDQTRCQSGECIPDYWLCDQIDDC-SNGEDEIGCSRTQCDKDEFKCS-TGSCVTQD 175
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD +DC ++ DE C GQ +C + C+ + ++CD DC
Sbjct: 176 WLCDGHVDC-----LEGEDEQACLTQTCPPGQFKCN-NDACVDNQYVCDGVHDC------ 223
Query: 323 DNTDEDWDKYFSHNAVLCH--PNELRCGSSNQ-----CVALSKFCDGKPDCSNGEDE 372
YF + + C P C Q C+ L CDG DCS GEDE
Sbjct: 224 ---------YFGEDELDCGGIPITEPCSGRYQCDDGRCIQLETICDGTYDCSYGEDE 271
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 94/209 (44%), Gaps = 32/209 (15%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDG 226
E +CG+ N C+ S C+G DC +GEDE P N F C G CI S CD
Sbjct: 840 EFQCGNGN-CIPNSAVCNGVRDCYDGEDESSCPLTNP---CNGFRCDDGTCIESSRVCDT 895
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST--DDIVDNTDEDW 284
+ DC D +DE N + G+ C + CI ++CD DCS D+ +E
Sbjct: 896 YKDC-PDRTDEQNCESEEICPGKFNCQ-TGFCIELRYICDGRQDCSNGLDESSCPINEGC 953
Query: 285 DKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
D C+NG CI N +CD DCS ED +K + N
Sbjct: 954 DSTEFTCYNGH--------CIGGNNVCDGIPDCS-------AGEDEEKCPAGCG-----N 993
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E CG N C+ S C+G+ DCS+GEDE
Sbjct: 994 EFECGRGN-CIPRSFICNGRLDCSDGEDE 1021
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 90/203 (44%), Gaps = 27/203 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C L CDG DC +GEDE + C +F C G C+P S++CDG +
Sbjct: 1496 SNGECFPLDARCDGHQDCYHGEDEEACPISGCNSNEFQCLDGSCLPASYRCDGLYEDCSL 1555
Query: 234 GSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
G DE + H C Q Q +++CD D D DE+ C
Sbjct: 1556 GEDETDCGPHSVCDRDQFQ----------DYVCDGRY----RDCEDGEDENSCP-SACNA 1600
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCST--DDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGS 349
+ +C S C+P +CD + DC T D+I N ++ N C P+ + +C
Sbjct: 1601 YEYECE-SGTCVPIQGMCDGKNDCPTGSDEIPLNCND------FQNLGDCDPHYQFQCYE 1653
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
N C+++ CD DC GEDE
Sbjct: 1654 GN-CISVHAVCDDYNDCLGGEDE 1675
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 87/197 (44%), Gaps = 28/197 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ S C+G+ DCS G+DE + C+ G F CG G CI + C+ + DC ++ +E
Sbjct: 735 CIPDSAVCNGRRDCSGGDDEVGCSDDRCSTG-FRCGNGNCIDSNRVCNRYNDCGDNSDEE 793
Query: 238 PNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
C C +G V CI N +CD DC + + +N + + QC NG
Sbjct: 794 TYACDGTPCSDGFV--CDDNSCISQNKVCDGNRDCYSGEDENNCNTVCE--FQCGNG--- 846
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVA 355
CIP++ +C+ DC +D + L +P N RC C+
Sbjct: 847 -----NCIPNSAVCNGVRDC------------YDGEDESSCPLTNPCNGFRC-DDGTCIE 888
Query: 356 LSKFCDGKPDCSNGEDE 372
S+ CD DC + DE
Sbjct: 889 SSRVCDTYKDCPDRTDE 905
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 85/213 (39%), Gaps = 41/213 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+L+ S+ QCV FCDG DC DE + G F C C+ + CDG
Sbjct: 502 DLKMCSTGQCVPGEAFCDGWVDCYGAVDEAGCPESPSCRGLFLCRTDYCLESTRICDGSF 561
Query: 229 DCLEDGSDEPNT-------CI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DC+ DG DE CI +C NG+ C + +C+ DCS + +N
Sbjct: 562 DCI-DGRDETEVSCFTAPDCIDGFECNNGE--------CTDISSVCNGARDCSEGEDEEN 612
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
F +C +G CIP + LCD DC + N E+ +
Sbjct: 613 CLPGCTAF-ECADG--------TCIPISSLCDGNADCRAAEDEINCPEECSGFTC----- 658
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C+ C+G+PDCS G+DE
Sbjct: 659 ---------SDGSCIDTRDVCNGRPDCSRGDDE 682
>gi|260824635|ref|XP_002607273.1| hypothetical protein BRAFLDRAFT_88221 [Branchiostoma floridae]
gi|229292619|gb|EEN63283.1| hypothetical protein BRAFLDRAFT_88221 [Branchiostoma floridae]
Length = 359
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 102/219 (46%), Gaps = 29/219 (13%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC---------TPGQFSC-GMGK 216
P +C S C CDG DC +G DE + EC + G F C G
Sbjct: 124 PGYFKCVGSATCFPPVWQCDGWDDCEDGSDEKDCTSKECYNSYDLKCESSGYFKCESSGA 183
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDD 275
C+P W+CDGF DC DGSDE N +C + + +C S C+P W CD DCS
Sbjct: 184 CVPPEWQCDGFDDC-SDGSDEENCASIECPSPEYFKCESSGSCVPPEWQCDGFDDCS--- 239
Query: 276 IVDNTDEDWDKFHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ +C + + +C S C+P W CD DD +D +DE+ +
Sbjct: 240 --DGSDEENCTSIECPSPEYFKCESSGICVPPEWQCD-----GFDDCLDGSDEE-----N 287
Query: 335 HNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C P +C SS C S CDG DCS+G DE
Sbjct: 288 CTSIECPSPEYFKCESSGVCFPQSWQCDGFDDCSDGSDE 326
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 141/314 (44%), Gaps = 58/314 (18%)
Query: 140 ILYWCDSHLNTVESVRVDGSHN-AVLCHPNELRCGSSNQCVALSKFCDG-KPDCSNGEDE 197
+L+ C L ++E + + N V C + C +++ CV LS+ CDG + C +G DE
Sbjct: 17 LLFVC---LLSIEHASLTRAANITVECPSSTFACKTTDDCVHLSQRCDGFRSHCPDGSDE 73
Query: 198 GPFCNAECT------PGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQ 249
ECT P FSC + +C S C+G +C DGSDE + + +C G
Sbjct: 74 ------ECTTPDCVSPDVFSCNIDDRCFSLSRVCNGVENC-PDGSDEVDCMLKECPLPGY 126
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN---------GQVQCALS 300
+C S C P W CD DD D +DE +C+N G +C S
Sbjct: 127 FKCVGSATCFPPVWQCD-----GWDDCEDGSDEKDCTSKECYNSYDLKCESSGYFKCESS 181
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKF 359
C+P W CD DCS D +DE+ + ++ C P +C SS CV
Sbjct: 182 GACVPPEWQCDGFDDCS-----DGSDEE-----NCASIECPSPEYFKCESSGSCVPPEWQ 231
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADEC 419
CDG DCS+G DE +C +++C P+P C P + QC D+C
Sbjct: 232 CDGFDDCSDGSDE-------ENCTSIEC-----PSPEYFKCESSGICVPPEWQCDGFDDC 279
Query: 420 LIDGSCDQTCTNTH 433
L DGS ++ CT+
Sbjct: 280 L-DGSDEENCTSIE 292
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 97/198 (48%), Gaps = 21/198 (10%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKCDGF 227
+C SS CV CDG DCS+G DE + EC +P F C G C+P W+CDGF
Sbjct: 176 FKCESSGACVPPEWQCDGFDDCSDGSDEENCASIECPSPEYFKCESSGSCVPPEWQCDGF 235
Query: 228 VDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC DGSDE N +C + + +C S C+P W CD DD +D +DE+
Sbjct: 236 DDC-SDGSDEENCTSIECPSPEYFKCESSGICVPPEWQCD-----GFDDCLDGSDEENCT 289
Query: 287 FHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+C + + +C S C P +W CD DCS D +DE+ + ++ C P
Sbjct: 290 SIECPSPEYFKCESSGVCFPQSWQCDGFDDCS-----DGSDEE-----NCPSIECPSPEY 339
Query: 345 LRCGSSNQCVALSKFCDG 362
+C SS CV CDG
Sbjct: 340 FKCESSGICVPPEWQCDG 357
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKC 224
P +C SS CV CDG DCS+G DE + EC +P F C G C+P W+C
Sbjct: 214 PEYFKCESSGSCVPPEWQCDGFDDCSDGSDEENCTSIECPSPEYFKCESSGICVPPEWQC 273
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DGF DCL DGSDE N +C + + +C S C P +W CD DCS D +DE+
Sbjct: 274 DGFDDCL-DGSDEENCTSIECPSPEYFKCESSGVCFPQSWQCDGFDDCS-----DGSDEE 327
Query: 284 WDKFHQCFNGQ-VQCALSKKCIPHNWLCD 311
+C + + +C S C+P W CD
Sbjct: 328 NCPSIECPSPEYFKCESSGICVPPEWQCD 356
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 95/250 (38%), Gaps = 31/250 (12%)
Query: 1 MIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLA 59
M+ +C G +C S C P W CD DD D +DE D K N ++ L
Sbjct: 117 MLKECPLPGYFKCVGSATCFPPVWQCD-----GWDDCEDGSDEK-DCTSKECYN-SYDLK 169
Query: 60 LE----FNHRNQSLCFIQQQNVSSVRLRCAQINDLLN--SWDLPAPEIF---------PL 104
E F + C + C+ +D N S + P+PE F P
Sbjct: 170 CESSGYFKCESSGACVPPEWQCDGFD-DCSDGSDEENCASIECPSPEYFKCESSGSCVPP 228
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-----YWCDSHLNTVESVRVDGS 159
+ + + + +I+ PS + + CD + ++ +
Sbjct: 229 EWQCDGFDDCSDGSDEENCTSIECPSPEYFKCESSGICVPPEWQCDGFDDCLDGSDEENC 288
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKC 217
+ P +C SS C S CDG DCS+G DE + EC +P F C G C
Sbjct: 289 TSIECPSPEYFKCESSGVCFPQSWQCDGFDDCSDGSDEENCPSIECPSPEYFKCESSGIC 348
Query: 218 IPESWKCDGF 227
+P W+CDGF
Sbjct: 349 VPPEWQCDGF 358
>gi|291225862|ref|XP_002732917.1| PREDICTED: zonadhesin-like, partial [Saccoglossus kowalevskii]
Length = 8884
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 108/251 (43%), Gaps = 47/251 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E CG+ +C+ CDG DC +G DE C C QF+C G C+ ++++C
Sbjct: 1063 CLPGEFTCGN-GRCIPGRWVCDGGNDCHDGSDET-ECVHTCEENQFTCTSGDCVAQNFRC 1120
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC D SDE +C G+ QC SKKCI +LCD + DC DD D D +
Sbjct: 1121 DGLPDC-NDHSDEYGCGPPKCGKGEFQCPESKKCIARIFLCDHDYDCGADDHADEEDCKF 1179
Query: 285 --------------DKFHQC------FNGQVQCALSKKCIPHNWLCDEEMDC-------- 316
HQC +G + + C PH + C + DC
Sbjct: 1180 CDVREFSCDTGPCLPAIHQCDGHDDCGDGSDEYGCNCTC-PHEFTCRDCSDCLPTHEICD 1238
Query: 317 STDDIVDNTDEDW--------------DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+ D +DE+ + +V C PN+ C +S +C+ + CD
Sbjct: 1239 GIEQCADGSDEEMCATTRPSVPLKIVEVGMTTLPSVTCGPNQYIC-TSGECINTIEVCDN 1297
Query: 363 KPDCSNGEDEG 373
K DC +GEDE
Sbjct: 1298 KTDCQSGEDEA 1308
>gi|426245664|ref|XP_004016626.1| PREDICTED: sortilin-related receptor [Ovis aries]
Length = 2200
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++ C G CI SW CDG
Sbjct: 1107 TQFRCHESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYGCSSGMCIRSSWVCDGD 1166
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1167 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1219
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C+ + CIP + CD DCS D +DE H LC +
Sbjct: 1220 NCEKKCNG-FRCS-NGTCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1266
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1267 FVCKNRQQCLFQSMVCDGIIQCRDGSDEDP 1296
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 143/342 (41%), Gaps = 75/342 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 921 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSDMAILAS 977
Query: 167 ----PNELRC------GSSNQCVA-------LSK-----------------------FCD 186
P +L+ SN C + L K C
Sbjct: 978 RLTGPMDLKIFYRGKTTGSNACASRPCSLLCLPKADGSRSCRCPDGGSSSGPPSGGLVCG 1037
Query: 187 GKPD----CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
G PD C +G + + C E C Q+ C GKCI W CD DC D SDE
Sbjct: 1038 GPPDLMCECPHGYQQKNHTCVKEEDTCLRNQYRCSNGKCINSIWWCDFDNDC-GDMSDER 1096
Query: 239 NTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
N C + Q +C S CIP ++ CD E DC DN+DE + HQC + + C
Sbjct: 1097 NCPTTVCDLDTQFRCHESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYGC 1151
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVA 355
+ S CI +W+CD + DC DW + A+ C + +C + C+
Sbjct: 1152 S-SGMCIRSSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIP 1199
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
CDG DC +G DE P N + C +CS+ C P+ +
Sbjct: 1200 QRWACDGDMDCQDGSDEDP-VNCEKKCNGFRCSNGTCIPSSK 1240
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQCFNGQVQCALSKK 257
QF C G+CIP WKCD DC D SDE P C +C+ S
Sbjct: 1359 QFRCENGRCIPSRWKCDRENDC-GDWSDEKDCGDSHVLPSPTPGPSTCLPNYYRCS-SGA 1416
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCI 304
C+ +W+CD DC +D +DE+ + +C + +C KKCI
Sbjct: 1417 CVMDSWVCDGYRDC-----MDGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCI 1471
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P+ CD DC D DE +H+ + C E +C C+ LS+ CDG
Sbjct: 1472 PNWRRCDGHQDCQ-----DGQDEA--NCPTHSTLTCTALEFQCQDGEACIMLSERCDGFL 1524
Query: 365 DCSNGEDE 372
DCS+ DE
Sbjct: 1525 DCSDESDE 1532
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 40/179 (22%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------GPFCNAECTPGQFSCGM 214
+ RC + +C+ CD + DC + DE GP + C P + C
Sbjct: 1359 QFRC-ENGRCIPSRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGP---STCLPNYYRCSS 1414
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPH 261
G C+ +SW CDG+ DC+ DGSDE T + +C + +C KKCIP+
Sbjct: 1415 GACVMDSWVCDGYRDCM-DGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCIPN 1473
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + QC + CI + CD +DCS
Sbjct: 1474 WRRCDGHQDCQ-----DGQDEANCPTHSTLTCTALEFQCQDGEACIMLSERCDGFLDCS 1527
>gi|115699004|ref|XP_780169.2| PREDICTED: low-density lipoprotein receptor-related protein 1
[Strongylocentrotus purpuratus]
Length = 1110
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 97/208 (46%), Gaps = 20/208 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E C ++ QC+ S CDG P CS GEDE + C P +F CG G+C+P S KC
Sbjct: 381 CQPSEFEC-TNGQCLPASDKCDGYPRCSGGEDEIGCQLSNCQPSEFECGNGQCLPASDKC 439
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG+ C G DE + C + +C + +C+P + CD CS + DE
Sbjct: 440 DGYPRC-SGGEDEIGCRLTNCQPSEFECG-NGQCLPASDKCDGYPHCSGGE-----DEIG 492
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C + +CA + +C+P + CD C+ + C P+E
Sbjct: 493 CQLSNCQLSEFECA-NGQCLPASDKCDGYPHCTG----------GEDEIGCQLTNCQPSE 541
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +C+ S CDG P CS GEDE
Sbjct: 542 FEC-KDGKCIPASDKCDGYPHCSGGEDE 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 114/247 (46%), Gaps = 30/247 (12%)
Query: 170 LRCGSSNQCVALSKFCDGKPDC---SNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
RC +S +C+ LS CDG DC + E E +C F C G C+ + CDG
Sbjct: 71 FRCATSQECIPLSLVCDGVNDCDYDAYDETEESCKVVQCD--GFLCRDGACLLTEFVCDG 128
Query: 227 FVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC DG DE ++QC + Q QC S +CIPH W CD DC + DE
Sbjct: 129 TYDC-RDGMDEMECSLNQCSADDQFQCR-SGRCIPHFWRCDMLEDCQAGE-----DELEC 181
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+ +QC + +C + C+ W+CD + DC N +++ AV+C
Sbjct: 182 EHNQCQGDEFRCD-TGACVIRIWVCDGQNDCP------NAEDETVGCNLVPAVVCDEGLF 234
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD--CENLKC---SHKCSPTPRGAMC 400
+CG + C+ CDG +C G+DE C N + C+ +C ++C G +
Sbjct: 235 QCGDQS-CIPDYLVCDGNTNCPGGDDEQQECCNADEFRCQTGQCIPEQYRCD----GLIR 289
Query: 401 FCPAGQN 407
CPAG++
Sbjct: 290 DCPAGED 296
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 95/214 (44%), Gaps = 19/214 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C ++ QC+ S CDG P C+ GEDE C P +F C GKCIP S KC
Sbjct: 498 CQLSEFEC-ANGQCLPASDKCDGYPHCTGGEDEIGCQLTNCQPSEFECKDGKCIPASDKC 556
Query: 225 DGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG+ C G DE NT +C CI + LC+ + DC D D
Sbjct: 557 DGYPHC-SGGEDETDCSLSNTSPVECGPPLTFECPDGTCISSDLLCNGQPDCPYSD-ADE 614
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ C Q +C CI +C++ DC D +DE ++ + L
Sbjct: 615 QPGNCRIISACSPNQFECD-DGSCIYSGLVCNDRDDCP-----DQSDEAVERCGFN---L 665
Query: 340 CHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ + RC C+ L + C+ DCSNGEDE
Sbjct: 666 CNSEDGFRC-QDGSCIPLYQVCNDVLDCSNGEDE 698
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 23/204 (11%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCS-NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
++C + C L C+G +C NGEDE C P +F C G+C+P S KCDG+
Sbjct: 348 VQCTYGHVCAVL---CNGVRECPVNGEDEIGCPLTNCQPSEFECTNGQCLPASDKCDGYP 404
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH 288
C G DE + C + +C + +C+P + CD CS + DE +
Sbjct: 405 RC-SGGEDEIGCQLSNCQPSEFECG-NGQCLPASDKCDGYPRCSGGE-----DEIGCRLT 457
Query: 289 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
C + +C + +C+P + CD CS + C +E C
Sbjct: 458 NCQPSEFECG-NGQCLPASDKCDGYPHCSG----------GEDEIGCQLSNCQLSEFEC- 505
Query: 349 SSNQCVALSKFCDGKPDCSNGEDE 372
++ QC+ S CDG P C+ GEDE
Sbjct: 506 ANGQCLPASDKCDGYPHCTGGEDE 529
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 83/204 (40%), Gaps = 31/204 (15%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ CD DC GEDE + +C +F C G C+ W CDG DC +
Sbjct: 156 SGRCIPHFWRCDMLEDCQAGEDELECEHNQCQGDEFRCDTGACVIRIWVCDGQNDC-PNA 214
Query: 235 SDEPNTC----IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
DE C C G QC + CIP +CD +C D D+ +C
Sbjct: 215 EDETVGCNLVPAVVCDEGLFQCG-DQSCIPDYLVCDGNTNCPGGD---------DEQQEC 264
Query: 291 FNGQVQCALSKKCIPHNWLCDEEM-DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
N + +CIP + CD + DC + DED C NE +C +
Sbjct: 265 CNADEFRCQTGQCIPEQYRCDGLIRDCPAGE-----DEDCG---------CGANEFQCDT 310
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
C+ + C+ + DC +G DE
Sbjct: 311 GT-CIPDIQRCNNQIDCDDGSDEA 333
>gi|338721859|ref|XP_001917262.2| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein [Equus caballus]
Length = 4365
Score = 85.5 bits (210), Expect = 6e-14, Method: Composition-based stats.
Identities = 50/130 (38%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGK 216
H V C P+E C S C+ CDG+ DC +G DE GP C P +F CG G
Sbjct: 267 HRPVPCGPHEAAC-HSGHCIPKDYVCDGQEDCKDGSDELDCGP--TPPCEPNEFPCGNGH 323
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCS 272
C + W+CDG DC ED +DE + + C Q +C + CIP ++ CDEE DC
Sbjct: 324 CALKLWRCDGDFDC-EDRTDEADCPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCP 382
Query: 273 TDDIVDNTDE 282
D +DE
Sbjct: 383 -----DRSDE 387
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 92/222 (41%), Gaps = 28/222 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG----MGKC 217
A +C E C S N+CVAL CD +PDC + DE N E + S M
Sbjct: 183 ARVCTEAEFACHSHNECVALEYRCDRRPDCRDMSDE---LNCEDLVPELSSLPPPLMETP 239
Query: 218 IPESWKCDGFVDCL------EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+P + + L + EP+ + C + C S CIP +++CD + DC
Sbjct: 240 LPPHYPEVATIRQLLVTPAPQPLFPEPHRPV-PCGPHEAACH-SGHCIPKDYVCDGQEDC 297
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE D
Sbjct: 298 K-----DGSDELDCGPTPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-D 345
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 346 CPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 387
Score = 39.7 bits (91), Expect = 3.3, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 7/59 (11%)
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
A +C E C S N+CVAL CD +PDC + DE +CE+L P P
Sbjct: 183 ARVCTEAEFACHSHNECVALEYRCDRRPDCRDMSDE-------LNCEDLVPELSSLPPP 234
>gi|281362590|ref|NP_996296.2| lipophorin receptor 1, isoform H [Drosophila melanogaster]
gi|39840998|gb|AAR31134.1| LD21010p [Drosophila melanogaster]
gi|272477175|gb|AAF56500.4| lipophorin receptor 1, isoform H [Drosophila melanogaster]
Length = 1037
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 113/269 (42%), Gaps = 64/269 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF CG G CIP
Sbjct: 136 CDEKQFQCHSGD-CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN 194
Query: 221 SWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIV 277
W+CD DC DGSDE N C + C + +C+P W+CD+ DCS
Sbjct: 195 KWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCS----- 248
Query: 278 DNTDE-------DWDKFHQCFNG--------------------QVQCAL----------- 299
D +DE D+F C NG + +C +
Sbjct: 249 DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTC 307
Query: 300 -SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+ CI W+CD + DCS D +DE + C +E +C C+ S
Sbjct: 308 TNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSW 362
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC 387
CDG DC +G+DE + A+C+N+ C
Sbjct: 363 LCDGDRDCPDGDDE-----HTANCKNVTC 386
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 88/221 (39%), Gaps = 64/221 (28%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 129 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 187
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCD 311
+ CIP+ W CD+E DC+ D +DE + + C + C + +C+P W+CD
Sbjct: 188 NGNCIPNKWRCDQESDCA-----DGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCD 242
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCG---------------------- 348
+ DCS D +DE HN C +E CG
Sbjct: 243 QSKDCS-----DGSDE-------HNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSD 290
Query: 349 -----------------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+G DE
Sbjct: 291 EKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDE 331
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 697 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 756
Query: 167 PNEL 170
E
Sbjct: 757 SGEY 760
>gi|296480204|tpg|DAA22319.1| TPA: sortilin-related receptor, L(DLR class) A repeats-containing
[Bos taurus]
Length = 2310
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 1217 TQFRCHESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRGDEYSCSSGMCIRSSWVCDGD 1276
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1277 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDMDCQ-----DGSDEDPL 1329
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1330 NCEKKCNG-FRCP-NGTCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1376
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1377 FVCKNRQQCLFQSMVCDGIIQCRDGSDEDP 1406
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 139/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 1039 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSDMAILAS 1095
Query: 167 ----PNELRC------GSSNQCVAL--SKFCDGKPD------CSNGEDEGPFCNA----E 204
P +L+ SN C + S C K D C +G + E
Sbjct: 1096 RLTGPMDLKIFYRGKTTGSNACASRPCSLLCLPKADGSRSCRCPDGVSSSVLPSGDLMCE 1155
Query: 205 CTPG------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C PG Q+ C GKCI W CD DC D SDE N C
Sbjct: 1156 CPPGYQQKNHKCVKEENTCLRNQYRCSNGKCINSIWWCDFDNDC-GDMSDERNCPTTVCD 1214
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + C+ S CI
Sbjct: 1215 LDTQFRCHESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRGDEYSCS-SGMCIR 1268
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1269 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1317
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1318 MDCQDGSDEDPL-NCEKKCNGFRCPNGTCIPSSK 1350
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQC 245
E P C+ QF C G CIP WKCD DC D SDE P C
Sbjct: 1460 EAPTCSRYF---QFQCENGHCIPNRWKCDRENDC-GDWSDEKDCGDSHILPSPTPGPSTC 1515
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-------------DKFHQCFN 292
+C+ S C+ +W+CD DC +D +DE+ + +C
Sbjct: 1516 LPNYYRCS-SGACVMDSWVCDGYRDC-----IDGSDEEACPSPANVTAASTPTQLGRCDR 1569
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ +C KKCIP+ CD DC D DE +H+ + C E +C
Sbjct: 1570 FEFECRQPKKCIPNWRRCDGHQDCQ-----DGQDEA--NCPTHSTLTCTALEFQCQDGEA 1622
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ LS+ CDG DCS+ DE
Sbjct: 1623 CIMLSERCDGFLDCSDESDE 1642
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1477 CIPNRWKCDRENDCGDWSDEKDCGDSHILPSPTPGP---STCLPNYYRCSSGACVMDSWV 1533
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC+ DGSDE T + +C + +C KKCIP+ CD D
Sbjct: 1534 CDGYRDCI-DGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCIPNWRRCDGHQD 1592
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + QC + CI + CD +DCS
Sbjct: 1593 CQ-----DGQDEANCPTHSTLTCTALEFQCQDGEACIMLSERCDGFLDCS 1637
>gi|426328231|ref|XP_004024902.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Gorilla gorilla gorilla]
Length = 4380
Score = 85.1 bits (209), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 266 GSVRPLPCGPQEAAC-RSGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 322
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 323 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 381
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 382 CP-----DRSDE 388
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 68/223 (30%), Positives = 90/223 (40%), Gaps = 36/223 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E C S N+CVAL CD +PDC + DE P T FS M + P
Sbjct: 187 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPT---FSLLM-ETTPL 242
Query: 221 SWKCDGFV----------DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+ + + L GS P C Q + C S CIP ++LCD + D
Sbjct: 243 PPRPETTIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPRDYLCDGQED 297
Query: 271 CSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C D +DE D C + C + C W CD + DC D TDE
Sbjct: 298 CE-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA- 345
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P + RC S+N C+ S CD + DC + DE
Sbjct: 346 NCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 388
>gi|397485797|ref|XP_003814026.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Pan paniscus]
Length = 4379
Score = 85.1 bits (209), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 266 GSVRPLPCGPQEAAC-RSGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 322
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 323 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 381
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 382 CP-----DRSDE 388
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 88/223 (39%), Gaps = 36/223 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECT----------PGQF 210
C E C S N+CVAL CD +PDC + DE P T P Q
Sbjct: 187 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTPLPPQP 246
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+ + P + + GS P C Q + C S CIP ++LCD + D
Sbjct: 247 ETTIMRQPPVTHAPQPLLP----GSVRPLPCGPQ----EAACR-SGHCIPRDYLCDGQED 297
Query: 271 CSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C D +DE D C + C + C W CD + DC D TDE
Sbjct: 298 CE-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA- 345
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P + RC S+N C+ S CD + DC + DE
Sbjct: 346 NCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 388
>gi|300795351|ref|NP_001179686.1| sortilin-related receptor precursor [Bos taurus]
Length = 2211
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 95/210 (45%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 1118 TQFRCHESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRGDEYSCSSGMCIRSSWVCDGD 1177
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1178 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDMDCQ-----DGSDEDPL 1230
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1231 NCEKKCNG-FRCP-NGTCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1277
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1278 FVCKNRQQCLFQSMVCDGIIQCRDGSDEDP 1307
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 139/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 940 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSDMAILAS 996
Query: 167 ----PNELRC------GSSNQCVAL--SKFCDGKPD------CSNGEDEGPFCNA----E 204
P +L+ SN C + S C K D C +G + E
Sbjct: 997 RLTGPMDLKIFYRGKTTGSNACASRPCSLLCLPKADGSRSCRCPDGVSSSVLPSGDLMCE 1056
Query: 205 CTPG------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C PG Q+ C GKCI W CD DC D SDE N C
Sbjct: 1057 CPPGYQQKNHKCVKEENTCLRNQYRCSNGKCINSIWWCDFDNDC-GDMSDERNCPTTVCD 1115
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + C+ S CI
Sbjct: 1116 LDTQFRCHESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRGDEYSCS-SGMCIR 1169
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1170 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1218
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1219 MDCQDGSDEDPL-NCEKKCNGFRCPNGTCIPSSK 1251
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 83/200 (41%), Gaps = 41/200 (20%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQC 245
E P C+ QF C G CIP WKCD DC D SDE P C
Sbjct: 1361 EAPTCSRYF---QFQCENGHCIPNRWKCDRENDC-GDWSDEKDCGDSHILPSPTPGPSTC 1416
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-------------DKFHQCFN 292
+C+ S C+ +W+CD DC +D +DE+ + +C
Sbjct: 1417 LPNYYRCS-SGACVMDSWVCDGYRDC-----IDGSDEEACPSPANVTAASTPTQLGRCDR 1470
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ +C KKCIP+ CD DC D DE +H+ + C E +C
Sbjct: 1471 FEFECRQPKKCIPNWRRCDGHQDCQ-----DGQDEA--NCPTHSTLTCTALEFQCQDGEA 1523
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ LS+ CDG DCS+ DE
Sbjct: 1524 CIMLSERCDGFLDCSDESDE 1543
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1378 CIPNRWKCDRENDCGDWSDEKDCGDSHILPSPTPGP---STCLPNYYRCSSGACVMDSWV 1434
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC+ DGSDE T + +C + +C KKCIP+ CD D
Sbjct: 1435 CDGYRDCI-DGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCIPNWRRCDGHQD 1493
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + QC + CI + CD +DCS
Sbjct: 1494 CQ-----DGQDEANCPTHSTLTCTALEFQCQDGEACIMLSERCDGFLDCS 1538
>gi|281362598|ref|NP_001163734.1| lipophorin receptor 1, isoform L [Drosophila melanogaster]
gi|272477179|gb|ACZ95028.1| lipophorin receptor 1, isoform L [Drosophila melanogaster]
Length = 978
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 113/269 (42%), Gaps = 64/269 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF CG G CIP
Sbjct: 136 CDEKQFQCHSGD-CIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCGNGNCIPN 194
Query: 221 SWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIV 277
W+CD DC DGSDE N C + C + +C+P W+CD+ DCS
Sbjct: 195 KWRCDQESDC-ADGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCDQSKDCS----- 248
Query: 278 DNTDE-------DWDKFHQCFNG--------------------QVQCAL----------- 299
D +DE D+F C NG + +C +
Sbjct: 249 DGSDEHNCNQTCRADEF-TCGNGRCIQKRWKCDHDDDCGDGSDEKECPVVPCDSVAEHTC 307
Query: 300 -SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+ CI W+CD + DCS D +DE + C +E +C C+ S
Sbjct: 308 TNGACIAKRWVCDGDPDCS-----DGSDERSCANVTKTTTPCLSHEYQCKDRITCLHHSW 362
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLKC 387
CDG DC +G+DE + A+C+N+ C
Sbjct: 363 LCDGDRDCPDGDDE-----HTANCKNVTC 386
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 88/221 (39%), Gaps = 64/221 (28%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ C C + Q +C
Sbjct: 129 GQSLEAKCDEKQFQCHSGDCIPIRFVCDGDADCKDHSDEQIKECKFIEATCSSDQFRCG- 187
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCD 311
+ CIP+ W CD+E DC+ D +DE + + C + C + +C+P W+CD
Sbjct: 188 NGNCIPNKWRCDQESDCA-----DGSDEANELCRARTCSPDEYACKSGEGQCVPLAWMCD 242
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCG---------------------- 348
+ DCS D +DE HN C +E CG
Sbjct: 243 QSKDCS-----DGSDE-------HNCNQTCRADEFTCGNGRCIQKRWKCDHDDDCGDGSD 290
Query: 349 -----------------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+G DE
Sbjct: 291 EKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDGSDE 331
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D + +YW D LN + S DGS + + +
Sbjct: 697 RIERAGMDGSHRTTIISYDVKWPNGITLDLVKKRIYWVDGKLNVISSANYDGSQRSQVLY 756
Query: 167 PNEL 170
E
Sbjct: 757 SGEY 760
>gi|390362926|ref|XP_003730258.1| PREDICTED: low-density lipoprotein receptor-related protein 4-like,
partial [Strongylocentrotus purpuratus]
Length = 1211
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 106/223 (47%), Gaps = 30/223 (13%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC---GMGKC 217
+AV C N+ C + N CV CDG DC +G DE + C P +F C C
Sbjct: 2 DAVACASNQFTCKNMN-CVKTIWVCDGDNDCGDGSDEINCPSLTCAPDEFECTGTNETTC 60
Query: 218 IPESWKCDGFVDCLEDGSDEPNT----CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
IP WKCDG ++C DGSDE +T QC G QC S +C+ ++W CD E DC
Sbjct: 61 IPNRWKCDGDINC-RDGSDESSTHCSGHTVQCSAGHFQCT-SGECVHNSWKCDGERDC-- 116
Query: 274 DDIVDNTDED---WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DED C + QC + CIP + CD C+ D +DE
Sbjct: 117 ---FDGSDEDSCPLVTPSPCAAVEFQCD-NGVCIPGDVECDGTQQCA-----DGSDE--- 164
Query: 331 KYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C+P RC S++ C+ + + C+G P+C N EDE
Sbjct: 165 -ANCNAPAECNPTTHFRC-SNSTCLPMVRVCNGIPECPNNEDE 205
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 139/343 (40%), Gaps = 48/343 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCN-AECTPGQFSCGMG 215
S + V C +C +S +CV S CDG+ DC +G DE P + C +F C G
Sbjct: 85 SGHTVQCSAGHFQC-TSGECVHNSWKCDGERDCFDGSDEDSCPLVTPSPCAAVEFQCDNG 143
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN---------TCIHQCFNGQVQCALSKKCIPHNWLCD 266
CIP +CDG C DGSDE N T +C N C+P +C+
Sbjct: 144 VCIPGDVECDGTQQC-ADGSDEANCNAPAECNPTTHFRCSN--------STCLPMVRVCN 194
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+C +N DE + N V + IP ++ N +
Sbjct: 195 GIPECP-----NNEDEPGQEICVWRNA-VGAGVGSTHIPR----IGGFTVTSHSGAFNVE 244
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSK--FCDGKPDCSNGEDEGPFCNNKADC-- 382
++ + ++ G S CV+LS G+ +G F + +C
Sbjct: 245 VNFQVWGGGGELISSSR----GGSWYCVSLSSKLLMVGQ----DGIWHKAFTRRRNECLT 296
Query: 383 ENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLID-GSCDQTCTNTHLSYVCSC 440
N CSH C G +C C A N+TQCVD +EC G C Q C N SY C C
Sbjct: 297 NNGGCSHTCLYLAIGHVCTCNASYALVNETQCVDINECKTTLGICSQRCYNLPGSYKCDC 356
Query: 441 TEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
E YTL +G+ N P+ ++ S+ +DIR L+ S
Sbjct: 357 DENYTLEHVNGRGHCKAN-PEFGAPKLLISNRLDIRIFDLSTS 398
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
E +E+AGM+G+ R+ +VT+ + WP+ L +DY DILYW D+ ++ SV G + V+
Sbjct: 518 EVIERAGMNGQGRTAIVTEGVSWPNGLTLDYTLDILYWIDAKEKSISSVNFMGGNRRVV 576
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 38/57 (66%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+E+AGM+G+ R+ +VT+ + WP+ L +DY D+LYW D+ +++ V G + V+
Sbjct: 894 IERAGMNGQGRTAIVTEGVSWPNGLTLDYTLDMLYWIDAKESSISCVDFMGGNRRVV 950
>gi|355745001|gb|EHH49626.1| hypothetical protein EGM_00316 [Macaca fascicularis]
Length = 4596
Score = 85.1 bits (209), Expect = 8e-14, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 300 GSVRPLPCGPQEAAC-RSGHCIPGDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 356
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 357 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESD 415
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 416 CP-----DRSDE 422
Score = 68.9 bits (167), Expect = 5e-09, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCN--AECTPGQFSC 212
C E C S N+CVAL CD +PDC + DE P + E TP
Sbjct: 221 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEELVLGISPTVSLLVETTP--LPL 278
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
I L GS P C Q + C S CIP ++LCD + DC
Sbjct: 279 RPETAIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPGDYLCDGQEDCE 333
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 334 -----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-NC 381
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 382 PTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESDCPDRSDE 422
>gi|194743772|ref|XP_001954374.1| GF18234 [Drosophila ananassae]
gi|190627411|gb|EDV42935.1| GF18234 [Drosophila ananassae]
Length = 1036
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 115/275 (41%), Gaps = 76/275 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKCIPE 220
C + +C S + C+ + CDG DC + DE F A C+ QF C G CIP
Sbjct: 139 CGEKQFQCRSGD-CIPIRFVCDGDADCKDHSDEQINECKFLEATCSTDQFRCTNGNCIPN 197
Query: 221 SWKCDGFVDCLEDGSDE------PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
W+CD DC DGSDE TC + C NG+ Q C+P W+CD+ DC
Sbjct: 198 KWRCDQERDC-ADGSDESKELCKARTCSPDEYACKNGEGQ------CVPLAWMCDQSKDC 250
Query: 272 STDDIVDNTDE-------DWDKFHQCFNG--------------------QVQCAL----- 299
S D +DE D+F C NG + +C +
Sbjct: 251 S-----DGSDEHNCNQTCRSDEF-TCGNGRCIQKRWVCDHDDDCGDGTDEKECPVVPCDS 304
Query: 300 -------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
+ CI W+CD + DCS D +DE + C P+E +C
Sbjct: 305 VAEHTCTNGACIAKRWVCDGDPDCS-----DASDERSCANVTKTTTPCLPHEYQCKDRIT 359
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
C+ S CDG DC +G+DE + A+C+N+ C
Sbjct: 360 CLHHSWLCDGDRDCPDGDDE-----HTANCKNVTC 389
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 87/221 (39%), Gaps = 64/221 (28%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCAL 254
G A+C QF C G CIP + CDG DC + ++ N C C Q +C
Sbjct: 132 GQSLEAKCGEKQFQCRSGDCIPIRFVCDGDADCKDHSDEQINECKFLEATCSTDQFRCT- 190
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSK-KCIPHNWLCD 311
+ CIP+ W CD+E DC+ D +DE + K C + C + +C+P W+CD
Sbjct: 191 NGNCIPNKWRCDQERDCA-----DGSDESKELCKARTCSPDEYACKNGEGQCVPLAWMCD 245
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHN-AVLCHPNELRCG---------------------- 348
+ DCS D +DE HN C +E CG
Sbjct: 246 QSKDCS-----DGSDE-------HNCNQTCRSDEFTCGNGRCIQKRWVCDHDDDCGDGTD 293
Query: 349 -----------------SSNQCVALSKFCDGKPDCSNGEDE 372
++ C+A CDG PDCS+ DE
Sbjct: 294 EKECPVVPCDSVAEHTCTNGACIAKRWVCDGDPDCSDASDE 334
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 38/64 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+E+AGM G +R+ +++ +++WP+ + +D +YW D LN + S DGS + +
Sbjct: 700 RIERAGMDGSHRTTIISYDVKWPNGITLDLVLKRIYWVDGKLNIISSANYDGSQRRQVLY 759
Query: 167 PNEL 170
+E
Sbjct: 760 SSEY 763
>gi|281346316|gb|EFB21900.1| hypothetical protein PANDA_004058 [Ailuropoda melanoleuca]
Length = 377
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVC 438
+C+ L C +KC+ C+C G + C D DEC I G+C QTC N++ SY C
Sbjct: 139 NCQQLNCQYKCAMVRNSTRCYCEDGFEVKEDGRSCRDQDECAIYGACSQTCINSYGSYAC 198
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SC EGY ++PD +SC A N P D ++ +++ I +LNGS
Sbjct: 199 SCVEGYIMQPDNRSCKAKNEPTDRLPMLLIANSETIEVFYLNGS 242
>gi|322797658|gb|EFZ19667.1| hypothetical protein SINV_04586 [Solenopsis invicta]
Length = 751
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 142/331 (42%), Gaps = 34/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + +C+A CD + DC + DE C F C G CI +C
Sbjct: 205 CSESEFKC-RNGKCIASRWRCDSEDDCGDNSDEEQCHQWVCKNESFQCASGHCIASYLRC 263
Query: 225 DGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DC D SDE N C + QC + C+ N +CD TDD DN
Sbjct: 264 DGARDC-RDMSDEINCPPRYPGGRYCPQSRFQCN-NNLCVSMNDICD-----GTDDCGDN 316
Query: 280 TDEDWD---KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+DE F + + QCA + KCI LCD D+ D +DE+
Sbjct: 317 SDESPTMCANFQCDTHRRFQCA-NHKCIARYQLCD-----GIDNCGDGSDENNMTMCVKQ 370
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC---ENLKCSHKC-S 392
C P ++ +C+ K CD DC + DE C++ C + C+H+C +
Sbjct: 371 TRPCDPITEYTCANKKCIDHLKLCDLADDCGDQSDE-LGCHHSHHCTDNDRGGCAHECHN 429
Query: 393 PTPRGAMCFCPAG---QNPNKTQCVDADECLIDG-SCDQTCTNTHLSYVCSCTEGYTLRP 448
G +C C +G N+ CVD DEC C CTN + +Y CSC +G+ L
Sbjct: 430 LMDGGYICACYSGYIISQDNRKHCVDVDECQTGSHQCSHICTNLNGTYACSCRQGFQL-- 487
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ V +D+ ++F++ ++R L
Sbjct: 488 -SDRHSGVCRAEDDNVVVLFANGPELRAYDL 517
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC---------------NAECTPG 208
+C P+ +C + N C CDG DC + DE N C P
Sbjct: 22 ICRPSVFQCANGN-CTPSVTICDGIDDCGDKSDETKCTLECGELEFKCKSNGHNRACDPS 80
Query: 209 -QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNW 263
+FSC GKCIP+ W CD DC +D SDEP Q C G +C + +CIP
Sbjct: 81 TEFSCKNGKCIPKLWMCDSDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGHANYRCIPKWL 139
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD DD D +DE + +C + +C+P WLCD DD D
Sbjct: 140 FCD-----GKDDCRDGSDERSENCPKCDPKMDFKCANNRCVPKQWLCD-----FADDCGD 189
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE D + C +E +C + +C+A CD + DC + DE
Sbjct: 190 GSDE-TDAMCKNKYRQCSESEFKC-RNGKCIASRWRCDSEDDCGDNSDE 236
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 84/193 (43%), Gaps = 41/193 (21%)
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+CDG DC +DGSDE ++C C QCA + C P +CD DD D +D
Sbjct: 1 RCDGEKDC-KDGSDESSSCPTRICRPSVFQCA-NGNCTPSVTICD-----GIDDCGDKSD 53
Query: 282 EDWDKFHQCFNGQVQCA----------------LSKKCIPHNWLCDEEMDCSTDDIVDNT 325
E +C + +C + KCIP W+CD + DC D++
Sbjct: 54 ETKCTL-ECGELEFKCKSNGHNRACDPSTEFSCKNGKCIPKLWMCDSDNDCG-----DDS 107
Query: 326 DEDWDKYFSHNAVLCHPNELRC-GSSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNK 379
DE N C RC G +N +C+ FCDGK DC +G DE P C+ K
Sbjct: 108 DEPAYMCRQRN---CTTGWQRCPGHANYRCIPKWLFCDGKDDCRDGSDERSENCPKCDPK 164
Query: 380 AD--CENLKCSHK 390
D C N +C K
Sbjct: 165 MDFKCANNRCVPK 177
>gi|4097487|gb|AAD09364.1| similar to low density lipoprotein receptor [Caenorhabditis
elegans]
Length = 925
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 155/403 (38%), Gaps = 84/403 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAE- 204
H+ + + +N+ E CG+ +C+ CD DC G DE A
Sbjct: 15 HILIKNTAQAPAVNNSTCDQAKEFDCGNGRLRCIPAEWQCDNVADCDKGRDESGCSYAHH 74
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-------------------PNTCIH-- 243
C+ C G C+ +KCDG DC DGSDE P T +
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC-RDGSDEQHCEYNILKSRFDGSNPSAPTTFVGHN 133
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDK------FH------ 288
+C +++C S +CI + +CD DCS DD V+ T + FH
Sbjct: 134 GPECHPPRLRCR-SGQCIQPDLVCDGHQDCSGGDDEVNCTRRGHENMQSSTDFHDDVHLV 192
Query: 289 ----------QCFNGQVQCALSKKCIPHNWL---------CDEEMDCSTDDIVDNTDEDW 329
+C +G C CIP ++L +E +C T+ +
Sbjct: 193 DPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNCQTNAPSE------ 246
Query: 330 DKYFSHNAVLCH----PNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++Y S A H CG+ C+ ++ C+G +C G+DE C ++
Sbjct: 247 EEYLSGQADHMHSCSAAGMYSCGTKGSEIGVCIPMNATCNGIKECPLGDDESKHC---SE 303
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLSYVC 438
C +C H C TP GA C C G + C D DEC G C C + S+ C
Sbjct: 304 CARKRCDHTCMNTPHGARCICQEGYKLADDGLTCEDEDECATHGHLCQHFCEDRLGSFAC 363
Query: 439 SCTEGYTLRPDGKSCT--AVNVPQDEPASIIFSSTVDIRRIHL 479
C GY L DG SC A P+ + S ++R++ L
Sbjct: 364 KCANGYELETDGHSCKYEATTTPE---GYLFISLGGEVRQMPL 403
>gi|432872004|ref|XP_004072069.1| PREDICTED: uncharacterized protein LOC100125501 [Oryzias latipes]
Length = 616
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 106/227 (46%), Gaps = 27/227 (11%)
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
HQC + + +C S +CI +W CD + C +D +DE C + +C
Sbjct: 415 HQCHSMEFRCG-SGECIHGSWKCDGDAGC-----LDGSDEAGCTRSTCHPDEFECG-DGT 467
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCD 361
CI + C+++ DC D TDE +H C P++ +C S +C+ + + CD
Sbjct: 468 CIHGSCQCNQQKDCR-----DTTDESSCVNVTH----CEGPDKFKC-RSGECITMERVCD 517
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECL 420
K DC + DE P CSH C+ G C C G + +K +C D DEC
Sbjct: 518 NKRDCRDWSDE-PL-------RECGCSHICNDLKIGRECLCQCGYSLRDKRRCEDIDECA 569
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
+C QTC NT SY C C EGY + P K+C ++ + ++ ++
Sbjct: 570 SPDTCSQTCINTMGSYKCECEEGYQVDPVTKACKSIEIEKESRMLVV 616
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 3/108 (2%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
CH E RCGS +C+ S CDG C +G DE + C P +F CG G CI S +C
Sbjct: 417 CHSMEFRCGSG-ECIHGSWKCDGDAGCLDGSDEAGCTRSTCHPDEFECGDGTCIHGSCQC 475
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ DC D +DE + + C S +CI +CD + DC
Sbjct: 476 NQQKDC-RDTTDESSCVNVTHCEGPDKFKCRSGECITMERVCDNKRDC 522
>gi|410032436|ref|XP_003949370.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein [Pan troglodytes]
Length = 4059
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 278 GSVRPLPCGPQEAAC-RSGHCIRRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 334
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 335 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 393
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 394 CP-----DRSDE 400
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 65/254 (25%), Positives = 84/254 (33%), Gaps = 98/254 (38%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------------------- 197
C E C S N+CVAL CD +PDC + DE
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTPLPPQP 258
Query: 198 -------GPFCNAE------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
P +A C P + +C G CI + CDG DC EDGSD
Sbjct: 259 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRSGHCIRRDYLCDGQEDC-EDGSD-- 315
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA 298
++ C C P+ + C G CA
Sbjct: 316 ----------ELDCGPPPPCEPNEFPC---------------------------GNGHCA 338
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
L W CD + DC D TDE + +C P + RC S+N C+ S
Sbjct: 339 LKL------WRCDGDFDCE-----DRTDEA-NCPTKRPEEVCGPTQFRCVSTNMCIPASF 386
Query: 359 FCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 387 HCDEESDCPDRSDE 400
>gi|297282427|ref|XP_001099299.2| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Macaca mulatta]
Length = 4569
Score = 84.7 bits (208), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 455 GSVRPLPCGPQEAAC-RSGHCIPGDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 511
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 512 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESD 570
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 571 CP-----DRSDE 577
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCN--AECTPGQFSC 212
C E C S N+CVAL CD +PDC + DE P + E TP
Sbjct: 376 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEELVLGISPTVSLLVETTP--LPL 433
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
I L GS P C Q + C S CIP ++LCD + DC
Sbjct: 434 RPETAIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPGDYLCDGQEDCE 488
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 489 -----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-NC 536
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 537 PTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESDCPDRSDE 577
>gi|301626898|ref|XP_002942623.1| PREDICTED: SCO-spondin-like [Xenopus (Silurana) tropicalis]
Length = 5929
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ K CDG+ DC G DE A C+ G+++CG G CI CDG DC DGSD
Sbjct: 1552 CIPREKLCDGEKDCPRGTDELLCTGAGTCSEGRWACGDGLCIGRDKLCDGEPDC-GDGSD 1610
Query: 237 E-----------PNTCI------------HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
E P + H C + QC S +C P WLCD E+DC
Sbjct: 1611 ELQAQCATAVPQPGGSVGSDSTEATGPTGHPCGRYEFQCG-SGECRPRGWLCDNEVDCR- 1668
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE + C Q +C LS +C+ + LCD C D +DE D
Sbjct: 1669 ----DGSDEQ-NCNRTCGLDQFKCTLSGECVGYGQLCDGIPHCR-----DQSDESTDNCG 1718
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S C P C + CV +S CDG PDC GEDE
Sbjct: 1719 STQIPPC-PGHFIC-INRMCVNISLLCDGAPDCPQGEDE 1755
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 100/240 (41%), Gaps = 47/240 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C NE C S +CV + CD + DC +G DE C C P + C G+C+P + +C
Sbjct: 1387 CADNEFACHLSERCVPNAWVCDNEDDCGDGSDE--ICLLTCAPHEHRCANGQCVPLAHRC 1444
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-- 282
DG DC+ D SDE + C + + +C+ + +CIP +CD E+DC D D ++
Sbjct: 1445 DGKADCV-DHSDEWSCPAPSCGSNEFRCS-NGRCIPIAHVCDGELDCGFGDDSDESNCSS 1502
Query: 283 ----------------------------DWDKFHQCF--NGQVQCALSKKCIPHNWLCDE 312
D+ C+ G+ QC CIP LCD
Sbjct: 1503 ECSSTHFRCSRGRCVPYIHHCDGHDDCGDFSDERGCYCDVGEFQCP-DGLCIPREKLCDG 1561
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E DC D+ A C CG C+ K CDG+PDC +G DE
Sbjct: 1562 EKDCPRGT---------DELLCTGAGTCSEGRWACG-DGLCIGRDKLCDGEPDCGDGSDE 1611
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 105/392 (26%), Positives = 146/392 (37%), Gaps = 88/392 (22%)
Query: 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFKRILNGTHTLA 59
C + + C LS++C+P+ W+CD E DC D +DE + R NG
Sbjct: 1386 HCADNEFACHLSERCVPNAWVCDNEDDCG-----DGSDEICLLTCAPHEHRCANGQ---C 1437
Query: 60 LEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRS 119
+ HR A D + W PAP + R
Sbjct: 1438 VPLAHRCDGK---------------ADCVDHSDEWSCPAPSCGSNEFRCSNG-------- 1474
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
+ I I + CD L+ D S+ + C RC S +CV
Sbjct: 1475 ----RCI------------PIAHVCDGELDCGFGDDSDESNCSSECSSTHFRC-SRGRCV 1517
Query: 180 ALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
CDG DC + DE G +C+ G+F C G CIP CDG DC +
Sbjct: 1518 PYIHHCDGHDDCGDFSDERGCYCDV----GEFQCPDGLCIPREKLCDGEKDCPRGTDELL 1573
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI----------------VDNT 280
T C G+ C CI + LCD E DC +D++ D+T
Sbjct: 1574 CTGAGTCSEGRWACG-DGLCIGRDKLCDGEPDCGDGSDELQAQCATAVPQPGGSVGSDST 1632
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ H C + QC S +C P WLCD E+DC D +DE + C
Sbjct: 1633 EATGPTGHPCGRYEFQCG-SGECRPRGWLCDNEVDCR-----DGSDEQ------NCNRTC 1680
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S +CV + CDG P C + DE
Sbjct: 1681 GLDQFKCTLSGECVGYGQLCDGIPHCRDQSDE 1712
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 108/271 (39%), Gaps = 54/271 (19%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------------------- 197
A C CG C+ K CDG+PDC +G DE
Sbjct: 1576 GAGTCSEGRWACGD-GLCIGRDKLCDGEPDCGDGSDELQAQCATAVPQPGGSVGSDSTEA 1634
Query: 198 -GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
GP C +F CG G+C P W CD VDC DGSDE N C C Q +C LS
Sbjct: 1635 TGPT-GHPCGRYEFQCGSGECRPRGWLCDNEVDC-RDGSDEQN-CNRTCGLDQFKCTLSG 1691
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ------CALSKKCIPHNWLC 310
+C+ + LCD C D +DE D C + Q+ +++ C+ + LC
Sbjct: 1692 ECVGYGQLCDGIPHCR-----DQSDESTDN---CGSTQIPPCPGHFICINRMCVNISLLC 1743
Query: 311 DEEMDC-STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 369
D DC +D V + C +E C S +C+ + C+G DC +G
Sbjct: 1744 DGAPDCPQGEDEVSCVTISPTGPKNQTVPAC--SEYSC-SDGRCLLFKQVCNGITDCDDG 1800
Query: 370 -EDEGPFCNNKADCENL-------KCSHKCS 392
E G +++ DC +CSH C
Sbjct: 1801 DEASGWVASDEKDCGFWSPWGSWSECSHSCG 1831
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 72/137 (52%), Gaps = 23/137 (16%)
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKFHQCFNGQ 294
EP + C + + C LS++C+P+ W+CD E DC +D+I T + H+C NGQ
Sbjct: 1379 EPCSSPSHCADNEFACHLSERCVPNAWVCDNEDDCGDGSDEICLLTCAPHE--HRCANGQ 1436
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
C+P CD + DC VD++DE +S A C NE RC S+ +C+
Sbjct: 1437 --------CVPLAHRCDGKADC-----VDHSDE-----WSCPAPSCGSNEFRC-SNGRCI 1477
Query: 355 ALSKFCDGKPDCSNGED 371
++ CDG+ DC G+D
Sbjct: 1478 PIAHVCDGELDCGFGDD 1494
>gi|328787927|ref|XP_392519.2| PREDICTED: sortilin-related receptor [Apis mellifera]
Length = 2152
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 140/332 (42%), Gaps = 67/332 (20%)
Query: 98 APEIFPLDERLEKAG---MHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
A I+ +D R + G G+ +++KN + + +D +YW D + +
Sbjct: 941 AERIYWVDARQDYIGSSDFDGKKFKKIISKNERVSHPFAVAVFKDNMYWDDWKQSMI--F 998
Query: 155 RVDGSH----NAVLCH----------PNELRCGSSNQCV--ALSKFCDGKPD-----CSN 193
D H N +L H + ++ G+ N+C S C G P C +
Sbjct: 999 VADKDHGVGINTILGHLPGLMDLKVFAHSMQHGT-NECANNTCSHICVGAPHGHVCLCPD 1057
Query: 194 GED--EG---------PFCN-------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
G + EG PF N + C P QF+C CIP SW CD DC D S
Sbjct: 1058 GMEMTEGKCMCPGGIAPFANFTCPRVASTCAPNQFTCANDVCIPGSWHCDRDNDC-GDNS 1116
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
DE N +C KCI +W+CD ++DC D DE K+ QC Q
Sbjct: 1117 DEINCASLTSCTPNFEC--DGKCISKHWVCDFDVDCK-----DGKDEMNCKYPQCSESQF 1169
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+C + +CI H W CD+E DC D +DE + C +E +C S C++
Sbjct: 1170 KCD-NGRCISHRWRCDDENDCR-----DGSDEK-NCSKKEYPTTCRSDEFQCKSDKSCIS 1222
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
S CDG+ DC +G DE A C+++ C
Sbjct: 1223 KSWKCDGEKDCEDGSDE-------AKCDDMVC 1247
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 118/275 (42%), Gaps = 70/275 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-----KCIP 219
C +E +C S C++ S CDG+ DC +G DE + C QF+C + +CI
Sbjct: 1207 CRSDEFQCKSDKSCISKSWKCDGEKDCEDGSDEAKCDDMVCQSWQFTCNLMSKEKHRCIY 1266
Query: 220 ESWKCDGFVDCLEDGSDEPNTCI-----------HQCFNGQVQCALSKKCIPHNWLCDEE 268
SW CDG DC DGSDE N I + C + C ++KC+P+ W CD
Sbjct: 1267 NSWVCDGDKDC-ADGSDEVNCTITVHSSVPLPNSNSCNSWMFMCN-NRKCVPYWWKCDSV 1324
Query: 269 MDCS--TDDIV--DNTDEDWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCST 318
DC +D+I + E+W + C Q QC L+ +CI +WLCD DC++
Sbjct: 1325 DDCGDDSDEIGCGNEEAEEWTVIYPTELSKVCREHQFQC-LNGECIQDSWLCDGSNDCTS 1383
Query: 319 --DDI----VDNTDEDWDKYFSHNAVLCHP---------------NELRCGSS------- 350
D+I D++ D++ C P +E C
Sbjct: 1384 GEDEIHCGSSDHSSCREDQFMCRMDGTCIPIRNVCNDVEECPDGSDEFGCSEEQYSNPAA 1443
Query: 351 -------------NQCVALSKFCDGKPDCSNGEDE 372
+C+ L+++CDGK DC +G DE
Sbjct: 1444 TPSCFLGLFPCDETRCIPLAQYCDGKQDCVDGFDE 1478
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C++ CD DC +G+DE +C+ QF C G+CI W+CD DC DGSD
Sbjct: 1136 KCISKHWVCDFDVDCKDGKDEMNCKYPQCSESQFKCDNGRCISHRWRCDDENDC-RDGSD 1194
Query: 237 EPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
E N + C + + QC K CI +W CD E DC D +DE C +
Sbjct: 1195 EKNCSKKEYPTTCRSDEFQCKSDKSCISKSWKCDGEKDCE-----DGSDEAKCDDMVCQS 1249
Query: 293 GQVQCALSKK----CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG 348
Q C L K CI ++W+CD + DC+ D +DE H++V PN C
Sbjct: 1250 WQFTCNLMSKEKHRCIYNSWVCDGDKDCA-----DGSDEVNCTITVHSSVPL-PNSNSCN 1303
Query: 349 S------SNQCVALSKFCDGKPDCSNGEDE 372
S + +CV CD DC + DE
Sbjct: 1304 SWMFMCNNRKCVPYWWKCDSVDDCGDDSDE 1333
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GKCIP 219
+C ++ +C + +C+ S CDG DC++GEDE G ++ C QF C M G CIP
Sbjct: 1355 VCREHQFQC-LNGECIQDSWLCDGSNDCTSGEDEIHCGSSDHSSCREDQFMCRMDGTCIP 1413
Query: 220 ESWKCDGFVDCLEDGSDEPN---------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C+ +C DGSDE CF G C +CIP CD + D
Sbjct: 1414 IRNVCNDVEEC-PDGSDEFGCSEEQYSNPAATPSCFLGLFPCD-ETRCIPLAQYCDGKQD 1471
Query: 271 CSTDDIVDNTDE 282
C VD DE
Sbjct: 1472 C-----VDGFDE 1478
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPG 208
GS + C ++ C C+ + C+ +C +G DE P C G
Sbjct: 1391 GSSDHSSCREDQFMCRMDGTCIPIRNVCNDVEECPDGSDEFGCSEEQYSNPAATPSCFLG 1450
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
F C +CIP + CDG DC+ DG DE N
Sbjct: 1451 LFPCDETRCIPLAQYCDGKQDCV-DGFDESN 1480
>gi|410972147|ref|XP_003992522.1| PREDICTED: sortilin-related receptor [Felis catus]
Length = 2252
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1159 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1218
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1219 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1271
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
K + NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1272 KCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTRFMD 1318
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1319 FVCKNRQQCLFHSMVCDGIVQCRDGSDE 1346
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 1116 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTVCDLDTQFRCQESGTCIPLSY 1174
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1175 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 1227
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD +MDC D +DED V C
Sbjct: 1228 ANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDED--------PVKC 1273
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 1274 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMD 1318
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 148/367 (40%), Gaps = 83/367 (22%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 981 IERITFDGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYTGSQMAILAS 1037
Query: 167 P----------NELRCGSSNQCVAL------------SKFC--------------DGKPD 190
+ + SN CV+ SK C D D
Sbjct: 1038 QLTGLMDMKIFYKGKTTGSNACVSRPCSLLCLPRANNSKSCRCPEGVSSTVLPSGDLMCD 1097
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + E C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1098 CPQGYQRENSTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTVCD 1156
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1157 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1210
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1211 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-HNGHCIPQRWACDGD 1259
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLID 422
DC +G DE P +KC KC+ CP G P+ C +C D
Sbjct: 1260 MDCQDGSDEDP----------VKCEKKCNGFR------CPNGTCIPSSKHCDGLRDC-SD 1302
Query: 423 GSCDQTC 429
GS +Q C
Sbjct: 1303 GSDEQHC 1309
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
CV+L CDG DC + DE N P +F C G CIP WKCD DC E
Sbjct: 1375 CVSLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFEFQCENGHCIPNRWKCDRENDC-E 1433
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1434 DWSDEKDCGDSHVLPSPTPGPSTCLPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1487
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ + +C + +C KKCIP+ CD DC D DE
Sbjct: 1488 EEACPSPANVTAASTPTQRGRCDRFEFECRQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1542
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1543 --NCPTHSTLTCMSMEFKCEDGEACIVLSERCDGFLDCSDESDE 1584
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + DG +V
Sbjct: 936 LKPGIYRSNMDGSAVHRLVSEDVKWPNGIAVD--DQWIYWTDAYLDCIERITFDGQQRSV 993
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS +A + F GK
Sbjct: 994 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYTGSQMAILASQLTGLMDMKIFYKGKT 1053
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + E +TC+
Sbjct: 1054 TGSNACVSRP-CSLLCLPRANNSKSCRC-PEGVSSTVLPSGDLMCDCPQGYQRENSTCVK 1111
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1112 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTVCDLDTQFRCQE 1165
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1166 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 1213
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1214 VCDGDNDCRDWSDEA 1228
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 69/170 (40%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1419 CIPNRWKCDRENDCEDWSDEKDCGDSHVLPSPTPGP---STCLPNYYRCSSGACVMDSWV 1475
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T +C + +C KKCIP+ CD D
Sbjct: 1476 CDGYRDC-ADGSDEEACPSPANVTAASTPTQRGRCDRFEFECRQPKKCIPNWKRCDGHQD 1534
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1535 CQ-----DGQDEANCPTHSTLTCMSMEFKCEDGEACIVLSERCDGFLDCS 1579
>gi|291399346|ref|XP_002716087.1| PREDICTED: heparan sulfate proteoglycan 2 [Oryctolagus cuniculus]
Length = 4416
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/125 (39%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C P E C S C+ CDG+ DC++G DE GP C P +F CG G C +
Sbjct: 329 CGPQEAAC-HSGHCIPKDYVCDGQEDCTDGSDELDCGP--TPPCEPNEFPCGNGHCALKL 385
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE DC
Sbjct: 386 WRCDGDFDC-EDRTDEANCPAKRPEEVCGPTQFRCVSTSTCIPASFHCDEESDCP----- 439
Query: 278 DNTDE 282
D +DE
Sbjct: 440 DRSDE 444
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 88/227 (38%), Gaps = 44/227 (19%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------GPFCNAECTPGQF 210
+C E C S N+CVAL CD +PDC + DE PF P Q
Sbjct: 244 VCTEAEFACHSHNECVALEYRCDRRPDCRDMSDELNCEEPIPALSTTKPFLETPSFPPQP 303
Query: 211 SCGMGK----CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
+ IP+ L P C Q + C S CIP +++CD
Sbjct: 304 EVATQRPPDMAIPQP---------LFPSLGRPEPCGPQ----EAACH-SGHCIPKDYVCD 349
Query: 267 EEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+ DC+ D +DE D C + C + C W CD + DC D T
Sbjct: 350 GQEDCT-----DGSDELDCGPTPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRT 398
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + +C P + RC S++ C+ S CD + DC + DE
Sbjct: 399 DEA-NCPAKRPEEVCGPTQFRCVSTSTCIPASFHCDEESDCPDRSDE 444
>gi|5919205|gb|AAD56241.1|AF185706_1 yolk receptor RME-2 [Caenorhabditis elegans]
Length = 925
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 153/401 (38%), Gaps = 80/401 (19%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAE- 204
H+ + + +N+ E CG+ +C+ CD DC NG DE A
Sbjct: 15 HILIKNTAQAPAVNNSTCDQAKEFDCGNGRLRCIPAEWQCDNVADCDNGRDESGCSYAHH 74
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-------------------PNTCIH-- 243
C+ C G C+ +KCDG C DGSDE P T +
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEEHC-RDGSDEQHCEYNILKSRFDGSNPSAPTTFVGHN 133
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDK------FH------ 288
+C +++C S +CI + +CD DCS DD V+ T + FH
Sbjct: 134 GPECHPPRLRCR-SGQCIQPDLVCDGHTDCSGGDDEVNCTRRGHENMQSSTDFHDDVHLV 192
Query: 289 ----------QCFNGQVQCALSKKCIPHNWL---------CDEEMDCSTDDIVDNTDEDW 329
+C +G C CIP ++L +E +C T+ +
Sbjct: 193 DPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNCQTNAPSE------ 246
Query: 330 DKYFSHNAVLCH----PNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++Y S A H CG+ C+ ++ C+G +C G+DE C ++
Sbjct: 247 EEYLSGQADHMHSCSAAGMYSCGTKGSEIGVCIPMNATCNGIKECPLGDDESKHC---SE 303
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLSYVC 438
C +C H C TP GA C C G + C D DEC G C C + S+ C
Sbjct: 304 CARKRCDHTCMNTPHGARCICQEGYKLADDGLTCEDEDECATHGHLCQHFCEDRLGSFAC 363
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C GY L DG SC E + S ++R++ L
Sbjct: 364 KCANGYELETDGHSCKYETTTTPE-GYLFISLGGEVRQMPL 403
>gi|355557642|gb|EHH14422.1| hypothetical protein EGK_00344, partial [Macaca mulatta]
Length = 4372
Score = 84.3 bits (207), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/132 (38%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 259 GSVRPLPCGPQEAAC-RSGHCIPGDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 315
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 316 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESD 374
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 375 CP-----DRSDE 381
Score = 68.2 bits (165), Expect = 9e-09, Method: Composition-based stats.
Identities = 67/221 (30%), Positives = 86/221 (38%), Gaps = 32/221 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCN--AECTPGQFSC 212
C E C S N+CVAL CD +PDC + DE P + E TP
Sbjct: 180 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEELVLGISPTVSLLVETTP--LPL 237
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
I L GS P C Q + C S CIP ++LCD + DC
Sbjct: 238 RPETAIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPGDYLCDGQEDCE 292
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 293 -----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-NC 340
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 341 PTKRPEEVCGPTQFRCVSTNVCIPASFHCDEESDCPDRSDE 381
>gi|395520105|ref|XP_003764178.1| PREDICTED: sortilin-related receptor [Sarcophilus harrisii]
Length = 2133
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 95/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +F+C G CI SW CDG
Sbjct: 1040 TQFRCQESGTCIPLSYKCDLEDDCGDNSDENHCEAHQCRNDEFNCSSGMCIRSSWVCDGD 1099
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C + QC + CIP W CD + DC D +DED
Sbjct: 1100 NDC-RDWSDEANCTAIFHTCESSSFQCH-NGHCIPQRWACDGDADCQ-----DGSDEDPI 1152
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C L+ CIP + CD DCS D +DE H LC +
Sbjct: 1153 SCEKKCNG-FRC-LNATCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRYMD 1199
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1200 FVCKNHQQCLFQSMVCDGIVQCRDGSDE 1227
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 997 CLRNQYRCSNGN-CINSIWWCDYDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1052
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + HQC N + C+ S CI +W+CD + DC D
Sbjct: 1053 LSYKCDLEDDC-GDNSDENHCEAHQCRNDEFNCS-SGMCIRSSWVCDGDNDCR-----DW 1105
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE FH C + QC + CIP W CD + DC D +DED
Sbjct: 1106 SDEANCTAIFHTCESSSFQCH-NGHCIPQRWACDGDADCQ-----DGSDED--------P 1151
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
+ C N RC ++ C+ SK CDG DCS+G DE P C D
Sbjct: 1152 ISCEKKCNGFRCLNAT-CIPSSKHCDGLHDCSDGSDEQHCEPLCTRYMD 1199
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 997 CLRNQYRCSNGNCINSIWWCDYDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1055
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE+ + HQC N + C+ S CI +W+CD + DC
Sbjct: 1056 KCDLEDDCG-----DNSDENHCEAHQCRNDEFNCS-SGMCIRSSWVCDGDNDC------- 1102
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNNKA 380
DW + A+ C + +C + C+ CDG DC +G DE P C K
Sbjct: 1103 ---RDWSDEANCTAIFHTCESSSFQC-HNGHCIPQRWACDGDADCQDGSDEDPISCEKK- 1157
Query: 381 DCENLKC-SHKCSPTPR 396
C +C + C P+ +
Sbjct: 1158 -CNGFRCLNATCIPSSK 1173
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 94/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1256 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFQCENGHCIPNRWKCDEENDC-G 1314
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ F +C S CI ++W CD DC+
Sbjct: 1315 DWSDERDCGDSHLRPPSTAGPSTCLPNYF----RCN-SGACIMNSWACDGYKDCA----- 1364
Query: 278 DNTDED-------------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DED + +C + +C KKCIP+ CD DC D
Sbjct: 1365 DGSDEDACPTAANVSSTSTAAQLGRCSRFEFECQQPKKCIPNWKRCDGHKDCR-----DG 1419
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + + + C C C+ L++ CDG DCS+G DE
Sbjct: 1420 MDE--SNCPTRSTLTCVSGRYMCEDGEACIVLTERCDGFLDCSDGSDE 1465
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P F C G CI SW
Sbjct: 1300 CIPNRWKCDEENDCGDWSDERDCGDSHLRPPSTAGP---STCLPNYFRCNSGACIMNSWA 1356
Query: 224 CDGFVDCLEDGSDE---PNTC----------IHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE P + +C + +C KKCIP+ CD D
Sbjct: 1357 CDGYKDC-ADGSDEDACPTAANVSSTSTAAQLGRCSRFEFECQQPKKCIPNWKRCDGHKD 1415
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
C D +D ++ C +G+ C + CI CD +DCS D +DE
Sbjct: 1416 CR--DGMDESNCPTRSTLTCVSGRYMCEDGEACIVLTERCDGFLDCS-----DGSDE 1465
>gi|194381442|dbj|BAG58675.1| unnamed protein product [Homo sapiens]
Length = 1158
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 65 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 124
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 125 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 177
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 178 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDE------QHCEPLCTHFMD 224
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 225 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 252
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 22 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 80
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 81 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 133
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 134 ANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 179
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 180 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 224
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 22 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 80
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 81 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 127
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 128 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDPV-NCEKK 182
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 183 CNGFRCPNGTCIPSSK 198
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 281 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 339
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 340 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 389
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C K CIP+ CD DC D
Sbjct: 390 DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHRPKTCIPNWKRCDGHQDCQ-----DG 444
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 445 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 490
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 211 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 270
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 271 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 328
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 329 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 387
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C C+ K CDG DC
Sbjct: 388 CA-----DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHRPKTCIPNWKRCDGHQDCQ 442
Query: 368 NGEDEG 373
+G DE
Sbjct: 443 DGRDEA 448
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 317 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 375
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C K CIP+
Sbjct: 376 VMDTWVCDGYRDC-ADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHRPKTCIPNWKR 434
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 435 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 485
>gi|29470|emb|CAA44373.1| Human basement membrane heparan sulfate proteoglycan core protein
[Homo sapiens]
Length = 4393
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 278 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 334
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 335 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 393
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 394 CP-----DRSDE 400
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 258
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 259 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 310
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 311 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 358
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 359 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
>gi|184427|gb|AAA52700.1| heparan sulfate proteoglycan [Homo sapiens]
Length = 4391
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 278 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 334
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 335 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 393
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 394 CP-----DRSDE 400
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 258
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 259 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 310
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 311 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 358
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 359 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
>gi|126012571|ref|NP_005520.4| basement membrane-specific heparan sulfate proteoglycan core
protein precursor [Homo sapiens]
gi|317373536|sp|P98160.4|PGBM_HUMAN RecName: Full=Basement membrane-specific heparan sulfate
proteoglycan core protein; Short=HSPG; AltName:
Full=Perlecan; Short=PLC; Contains: RecName:
Full=Endorepellin; Contains: RecName: Full=LG3 peptide;
Flags: Precursor
Length = 4391
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 278 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 334
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 335 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 393
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 394 CP-----DRSDE 400
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 258
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 259 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 310
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 311 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 358
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 359 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
>gi|11602963|emb|CAC18534.1| heparan sulfate proteoglycan perlecan [Homo sapiens]
Length = 4370
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 257 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 313
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 314 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 372
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 373 CP-----DRSDE 379
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 178 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 237
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 238 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 289
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 290 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 337
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 338 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 379
>gi|355699834|gb|AES01253.1| low density lipoprotein receptor-related protein 8, apolipoprotein
e receptor [Mustela putorius furo]
Length = 663
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+CI +W CD + DC D +DE+ C + QC+ CI + CD E DC
Sbjct: 2 ECIHSSWRCDGDPDCK-----DKSDEENCTVATCRPDEFQCS-DGTCIHGSRQCDREYDC 55
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
D++DE N LC P++ +C S +C+ L K C+ DC + DE
Sbjct: 56 K-----DSSDE----LGCINVTLCEGPSKFKC-HSGECITLDKVCNSVRDCRDWSDEPLK 105
Query: 376 CNNKADCENLK--CSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNT 432
+C + K CSH C+ G C CP G + ++ +C D DEC C Q C N
Sbjct: 106 ECGTNECLDNKGGCSHICNDLKVGYECLCPEGFRLVDRRRCEDIDECQDPDVCSQLCVNL 165
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY C C +GY L P K+C AV + A + F++ ++R++ L+ S
Sbjct: 166 EGSYKCDCEKGYQLDPHTKACKAVG----DIAYLFFTNRHEVRKMTLDRS 211
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 39/58 (67%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ ++G + +L
Sbjct: 335 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLNGGNRKML 392
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ S CDG PDC + DE A C P +F C G CI S +CD DC +D SD
Sbjct: 2 ECIHSSWRCDGDPDCKDKSDEENCTVATCRPDEFQCSDGTCIHGSRQCDREYDC-KDSSD 60
Query: 237 EPNTCIHQCF---NGQVQCALSKKCIPHNWLCDEEMDC 271
E CI+ + +C S +CI + +C+ DC
Sbjct: 61 ELG-CINVTLCEGPSKFKCH-SGECITLDKVCNSVRDC 96
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPGQFSCGMGKCIPESW 222
C P+E +C S C+ S+ CD + DC + DE N P +F C G+CI
Sbjct: 30 CRPDEFQC-SDGTCIHGSRQCDREYDCKDSSDELGCINVTLCEGPSKFKCHSGECITLDK 88
Query: 223 KCDGFVDCLEDGSDEP 238
C+ DC D SDEP
Sbjct: 89 VCNSVRDC-RDWSDEP 103
>gi|119615403|gb|EAW94997.1| heparan sulfate proteoglycan 2 (perlecan), isoform CRA_c [Homo
sapiens]
Length = 4347
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 233 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 289
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 290 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 348
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 349 CP-----DRSDE 355
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 154 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 213
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 214 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 265
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 266 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 313
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 314 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 355
>gi|119615401|gb|EAW94995.1| heparan sulfate proteoglycan 2 (perlecan), isoform CRA_b [Homo
sapiens]
gi|119615402|gb|EAW94996.1| heparan sulfate proteoglycan 2 (perlecan), isoform CRA_b [Homo
sapiens]
Length = 4346
Score = 84.0 bits (206), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 233 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 289
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 290 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 348
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 349 CP-----DRSDE 355
Score = 69.3 bits (168), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 154 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 213
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 214 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 265
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 266 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 313
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 314 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 355
>gi|4097463|gb|AAD09363.1| lipoprotein receptor precursor [Caenorhabditis elegans]
Length = 925
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 154/403 (38%), Gaps = 84/403 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDEGPFCNAE- 204
H+ + + +N+ E CG+ +C+ CD DC G DE A
Sbjct: 15 HILIKNTAQAPAVNNSTCDQAKEFDCGNGRLRCIPAEWQCDNVADCDKGRDESGCSYAHH 74
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-------------------PNTCIH-- 243
C+ C G C+ +KCDG DC DGSDE P T +
Sbjct: 75 CSTSFMLCKNGLCVANEFKCDGEDDC-RDGSDEQHCEYNILKSRFDGSNPSAPTTFLGHN 133
Query: 244 --QCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDK------FH------ 288
+C +++C S +CI + +CD DCS DD V+ T + FH
Sbjct: 134 GPECHPPRLRCR-SGQCIQPDLVCDGHQDCSGGDDEVNCTRRGHENMQSSTDFHDDVHLV 192
Query: 289 ----------QCFNGQVQCALSKKCIPHNWL---------CDEEMDCSTDDIVDNTDEDW 329
+C +G C CIP ++L +E +C T+ +
Sbjct: 193 DPTFFANEDNKCRSGYTMCHSGDVCIPDSFLCDGDLDCDDASDEKNCQTNAPSE------ 246
Query: 330 DKYFSHNAVLCH----PNELRCGSSNQ----CVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
++Y S A H CG C+ ++ C+G +C G+DE C ++
Sbjct: 247 EEYLSGQADHMHSCSAAGMYSCGRKGSEIGVCIPMNATCNGIKECPLGDDESKHC---SE 303
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNTHLSYVC 438
C +C H C TP GA C C G + C D DEC G C C + S+ C
Sbjct: 304 CARKRCDHTCMNTPHGARCICQEGYKLADDGLTCEDEDECATHGHLCQHFCEDRLGSFAC 363
Query: 439 SCTEGYTLRPDGKSCT--AVNVPQDEPASIIFSSTVDIRRIHL 479
C GY L DG SC A P+ + S ++R++ L
Sbjct: 364 KCANGYELETDGHSCKYEATTTPE---GYLFISLGGEVRQMPL 403
>gi|395821375|ref|XP_003784017.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Otolemur garnettii]
Length = 4823
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C P E C S C+ CDG+ DC +G DE GP C P +F CG G C +
Sbjct: 688 CGPQEAAC-HSGHCIPKDYLCDGQEDCKDGSDELDCGP--TPPCEPNEFPCGNGHCALKL 744
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W+CDG DC ED +DE + + C Q +C + CIP ++ CDEE DC
Sbjct: 745 WRCDGDFDC-EDRTDEADCPAKRPEEVCGPTQFRCVSTNTCIPASFHCDEESDCP----- 798
Query: 278 DNTDE 282
D +DE
Sbjct: 799 DRSDE 803
Score = 70.5 bits (171), Expect = 2e-09, Method: Composition-based stats.
Identities = 64/219 (29%), Positives = 86/219 (39%), Gaps = 26/219 (11%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIP 219
+C E C S N+C+AL CD +PDC + DE P TP + K P
Sbjct: 601 VCTEAEFACHSYNECIALEYRCDRRPDCRDMSDELNCEEPVPEYRPTPPV----LVKTPP 656
Query: 220 -----ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
E+ +D P+ Q S CIP ++LCD + DC
Sbjct: 657 LPLWTEATTTQRPLDTPSPQLLRPDLGRPLPCGPQEAACHSGHCIPKDYLCDGQEDCK-- 714
Query: 275 DIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE D C + C + C W CD + DC D TDE D
Sbjct: 715 ---DGSDELDCGPTPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-DCPA 764
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 765 KRPEEVCGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 803
>gi|46561852|gb|AAT01143.1| soft fertilization envelope protein 1 [Lytechinus variegatus]
Length = 1034
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 122/319 (38%), Gaps = 65/319 (20%)
Query: 143 WCDSHLNTVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
CD N +G + CH E C ++ +C+ + CDG DC NG DE
Sbjct: 213 LCDGKKNCPSGEDEEGCTDDHGCHIRQEFYCEANYRCLHRDRRCDGAVDCPNGNDEKACG 272
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPH 261
C +F C GKCI +CD VDC G DE C +C + +C L +CIP
Sbjct: 273 FTTCFSEEFRCASGKCIGREKRCDRVVDCPLPGDDEIG-CNRECNEEEFEC-LDGECIPL 330
Query: 262 NWLCDE-EMDCSTDDIVDNTDEDW-------DKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
CD DC + DED ++ CFNG +C+P NW CD E
Sbjct: 331 YRACDGFAFDCKS---YYGEDEDGCGQRRCPQHWYSCFNG--------RCLPENWRCDRE 379
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DCS ED C E CG C++ C+G DC+NG DE
Sbjct: 380 PDCS-------FGEDETNCGQTIVSACVQGEFSCGDG-HCISERHKCNGYNDCNNGLDEE 431
Query: 373 ---------------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKT 411
G C+ DC N + C T CPAGQ
Sbjct: 432 SCNLVTCPVGQVDCGNNYCVVGGRCDGTFDCSNRQDESGCPSTTT----TCPAGQ----- 482
Query: 412 QCVDA--DECLIDGSCDQT 428
VD + C++ G CD T
Sbjct: 483 --VDCGNNYCVVGGRCDGT 499
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 119/331 (35%), Gaps = 90/331 (27%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C E RC +S +C+ K CD DC D+ CN EC +F C G+CIP
Sbjct: 274 TTCFSEEFRC-ASGKCIGREKRCDRVVDCPLPGDDEIGCNRECNEEEFECLDGECIPLYR 332
Query: 223 KCDGFV-DCLEDGSDEPNTCI--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CDGF DC ++ + C + CFNG +C+P NW CD E DCS
Sbjct: 333 ACDGFAFDCKSYYGEDEDGCGQRRCPQHWYSCFNG--------RCLPENWRCDREPDCSF 384
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST--------------- 318
+ D T+ C G+ C CI C+ DC+
Sbjct: 385 GE--DETNCGQTIVSACVQGEFSCG-DGHCISERHKCNGYNDCNNGLDEESCNLVTCPVG 441
Query: 319 ---------------DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
D D ++ + C ++ CG+ N CV + CDG
Sbjct: 442 QVDCGNNYCVVGGRCDGTFDCSNRQDESGCPSTTTTCPAGQVDCGN-NYCVVGGR-CDGT 499
Query: 364 PDCSNGEDE------------------------GPFCNNKADCENLKCSHKCSPTPRGAM 399
DCSN +DE G C+ DC N + C T
Sbjct: 500 FDCSNRQDESGCPSTTTTCPAGQVDCGNNYCVVGGRCDGTFDCSNRQDESGCPSTTT--- 556
Query: 400 CFCPAGQNPNKTQCVDA--DECLIDGSCDQT 428
CPAGQ VD + C++ G CD T
Sbjct: 557 -TCPAGQ-------VDCGNNYCVVGGRCDGT 579
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 128/338 (37%), Gaps = 86/338 (25%)
Query: 177 QCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+C+ + CD +PDCS GEDE G + C G+FSCG G CI E KC+G+ DC +
Sbjct: 368 RCLPENWRCDREPDCSFGEDETNCGQTIVSACVQGEFSCGDGHCISERHKCNGYNDC-NN 426
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKFHQCF 291
G DE + + C GQV C + C+ CD DCS + DE C
Sbjct: 427 GLDEESCNLVTCPVGQVDCG-NNYCVV-GGRCDGTFDCS-----NRQDESGCPSTTTTCP 479
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCST--------------------------------D 319
GQV C + C+ CD DCS D
Sbjct: 480 AGQVDCG-NNYCVV-GGRCDGTFDCSNRQDESGCPSTTTTCPAGQVDCGNNYCVVGGRCD 537
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------- 372
D ++ + C ++ CG+ N CV + CDG DCSN +DE
Sbjct: 538 GTFDCSNRQDESGCPSTTTTCPAGQVDCGN-NYCVVGGR-CDGTFDCSNRQDESGCPSTT 595
Query: 373 -----------------GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
G C+ DC N + C T CPAG K C +
Sbjct: 596 TTCPAGQVDCGNNYCVVGGRCDGTFDCSNRQDESGCPSTTT----TCPAG----KVDCGN 647
Query: 416 ADECLIDGSCDQT--CTNTHLSYVCSCTEGYTLRPDGK 451
+ C++ G CD T C+N C T T P GK
Sbjct: 648 -NYCVVGGRCDGTFDCSNRQDESGCPSTT--TTCPAGK 682
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 94/217 (43%), Gaps = 29/217 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIP 219
C ++ CG+ N CV + CDG DCSN +DE P C GQ CG C+
Sbjct: 555 TTTCPAGQVDCGN-NYCVVGGR-CDGTFDCSNRQDESGCPSTTTTCPAGQVDCGNNYCVV 612
Query: 220 ESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+CDG DC +D S P+T C G+V C + C+ CD DCS
Sbjct: 613 -GGRCDGTFDCSNRQDESGCPST-TTTCPAGKVDCG-NNYCVV-GGRCDGTFDCS----- 663
Query: 278 DNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ DE C G+V C + C+ CD DCS + DE
Sbjct: 664 NRQDESGCPSTTTTCPAGKVDCG-NNYCVV-GGRCDGTFDCS-----NRQDESG---CPS 713
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ CG+ N CV ++ CDGK DCSNG DE
Sbjct: 714 TTTTCPAGQVDCGN-NYCVYGTR-CDGKTDCSNGSDE 748
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 100/235 (42%), Gaps = 43/235 (18%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN-----GEDEGPFCNA---ECT 206
R DGS RC S CV L + CDG+PDC++ +++ +C+A E
Sbjct: 60 RYDGSRG--------FRC-SDGGCVRLREVCDGEPDCTDDAQTADDEDAMYCSANNLEEP 110
Query: 207 PGQFSCGMGKCIPESWKCDG-FVDCLEDGSDEPNTCIHQCFNGQVQ---CALSKKCIPHN 262
+ C G+CIP CDG VDC G DE G V+ C S CI +
Sbjct: 111 CSTYQCSGGQCIPWDSTCDGDPVDCEYTGEDETEALCGVTCPGDVRRFHCNNS-VCITRS 169
Query: 263 WLCDEEMDC-STDDIVDNTDEDW----DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+CD DC DD V + + +K +C +G CI + LCD + +C
Sbjct: 170 LICDLRCDCYECDDEVGCAEHTYPCDDNKQFRCDDG--------TCILDDQLCDGKKNCP 221
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ + + +D + E C ++ +C+ + CDG DC NG DE
Sbjct: 222 SGEDEEGCTDDHGCHIRQ--------EFYCEANYRCLHRDRRCDGAVDCPNGNDE 268
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 92/217 (42%), Gaps = 29/217 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIP 219
C ++ CG+ N CV + CDG DCSN +DE P C GQ CG C+
Sbjct: 515 TTTCPAGQVDCGN-NYCVVGGR-CDGTFDCSNRQDESGCPSTTTTCPAGQVDCGNNYCVV 572
Query: 220 ESWKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+CDG DC +D S P+T C GQV C + C+ CD DCS
Sbjct: 573 -GGRCDGTFDCSNRQDESGCPST-TTTCPAGQVDCG-NNYCVV-GGRCDGTFDCS----- 623
Query: 278 DNTDEDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
+ DE C G+V C + C+ CD DCS + DE
Sbjct: 624 NRQDESGCPSTTTTCPAGKVDCG-NNYCVV-GGRCDGTFDCS-----NRQDESG---CPS 673
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ CG+ N CV + CDG DCSN +DE
Sbjct: 674 TTTTCPAGKVDCGN-NYCVVGGR-CDGTFDCSNRQDE 708
>gi|441671940|ref|XP_004092317.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein-like [Nomascus
leucogenys]
Length = 4449
Score = 83.6 bits (205), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 437 GSVRPLPCGPQEAAC-RSGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 493
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE + + C Q +C + CIP ++ CDEE D
Sbjct: 494 GHCALKLWRCDGDFDC-EDRTDEASCPTKRPEEVCGPTQFRCVSTNTCIPASFHCDEESD 552
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 553 CP-----DRSDE 559
Score = 67.8 bits (164), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/221 (30%), Positives = 85/221 (38%), Gaps = 32/221 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCN--AECTPGQFSC 212
C E C S N+CVAL CD +PDC + DE P + E TP
Sbjct: 358 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTP--LPP 415
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
I L GS P C Q + C S CIP ++LCD + DC
Sbjct: 416 RPETTIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EAACR-SGHCIPRDYLCDGQEDCE 470
Query: 273 TDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
D +DE D C + C + C W CD + DC D TDE
Sbjct: 471 -----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEASCP 519
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V C P + RC S+N C+ S CD + DC + DE
Sbjct: 520 TKRPEEV-CGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 559
>gi|308447629|ref|XP_003087476.1| hypothetical protein CRE_11649 [Caenorhabditis remanei]
gi|308255371|gb|EFO99323.1| hypothetical protein CRE_11649 [Caenorhabditis remanei]
Length = 281
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 101/210 (48%), Gaps = 25/210 (11%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEG--PFCNAECT-PGQFSCGMGK-CIPESWKCDGFVDC 230
S C+A + CD DC++G DE P +C+ P F C G+ C + KCDG DC
Sbjct: 76 SVSCIAEYQRCDNITDCADGSDEKDCPASTVDCSSPNVFMCADGRQCFDMTKKCDGKYDC 135
Query: 231 LEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDK 286
D SDE ++C CF Q +CA +CI +W+CD DC+ D +DE D +
Sbjct: 136 -RDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCA-----DGSDEPDTCE 189
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
F +C + QC +K+C P + CD DC DN+DE+ C P +
Sbjct: 190 FKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDEE-----ECGEYRCPPGKWN 238
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
C + C+ CDG DC++G DE C
Sbjct: 239 CPGTGHCIDQLNLCDGAKDCADGADEQQCC 268
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 79/156 (50%), Gaps = 12/156 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCG-MGKCIPESW 222
PN C QC ++K CDGK DC + DE C+ C QF C +CI +SW
Sbjct: 111 PNVFMCADGRQCFDMTKKCDGKYDCRDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSW 170
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC DGSDEP+TC +C + QC +K+C P + CD DC DN+D
Sbjct: 171 VCDGSKDCA-DGSDEPDTCEFKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSD 223
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
E+ ++C G+ C + CI LCD DC+
Sbjct: 224 EEECGEYRCPPGKWNCPGTGHCIDQLNLCDGAKDCA 259
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 78/196 (39%), Gaps = 20/196 (10%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL----SKKCIP 260
C F C GKCI WKCDG DC DG DE + C + Q QC S CI
Sbjct: 23 CNENDFRCSDGKCIRAEWKCDGSGDC-SDGEDEKDCPHPGCKSDQWQCDTYTWHSVSCIA 81
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
CD DC+ D D D CA ++C CD + DC D
Sbjct: 82 EYQRCDNITDCA--DGSDEKDCPASTVDCSSPNVFMCADGRQCFDMTKKCDGKYDCR--D 137
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--- 377
+ D D S N C + RC QC+ S CDG DC++G DE C
Sbjct: 138 LSDEKDS-----CSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKK 192
Query: 378 ---NKADCENLKCSHK 390
N+ C+N +C +
Sbjct: 193 CTANEFQCKNKRCQPR 208
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKC 217
S N C + RC QC+ S CDG DC++G DE C +CT +F C +C
Sbjct: 146 SRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCADGSDEPDTCEFKKCTANEFQCKNKRC 205
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
P ++CD + DC D SDE ++C G+ C + CI LCD DC+
Sbjct: 206 QPRKFRCDYYDDCG-DNSDEEECGEYRCPPGKWNCPGTGHCIDQLNLCDGAKDCA 259
>gi|350588572|ref|XP_003357377.2| PREDICTED: sortilin-related receptor-like [Sus scrofa]
Length = 1501
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 407 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCELHQCRSNEYSCSSGMCIRSSWVCDGD 466
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 467 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 519
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DC D +DE H LC +
Sbjct: 520 TCEKKCNG-FRCP-NGTCIPSSKHCDGLHDCG-----DGSDE------QHCEPLCTRFMD 566
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 567 FVCKNRQQCLFQSMVCDGIVQCRDGSDE 594
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 364 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTVCDLDTQFRCQESGTCIPLSY 422
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 423 KCDLEDDC-GDNSDESHCELHQCRSNEYSCS-SGMCIRSSWVCDGDNDCR-----DWSDE 475
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD +MDC D +DED V C
Sbjct: 476 ANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDED--------PVTC 521
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DC +G DE P C D
Sbjct: 522 EKKCNGFRC-PNGTCIPSSKHCDGLHDCGDGSDEQHCEPLCTRFMD 566
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 138/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + S A+L
Sbjct: 229 IERVTFSGQQRS-IILDNLPHPYAIAVFKNE--IYWDDWSELSIFRASKHSKSDMAILAS 285
Query: 167 ----PNELRC------GSSNQCVAL--SKFCDGK---------PDCSNG----------- 194
P +L+ SN CV+ S C K PD +G
Sbjct: 286 QLTGPMDLKIFYRGKTTGSNACVSRPCSLLCLPKANNTRTCRCPDGVSGSVLPSGDLMCE 345
Query: 195 -----EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
+ + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 346 CPQGYQLKNHTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTVCD 404
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 405 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCELHQCRSNEYSCS-SGMCIR 458
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 459 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-HNGHCIPQRWACDGD 507
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P K C +C + C P+ +
Sbjct: 508 MDCQDGSDEDPVTCEKK-CNGFRCPNGTCIPSSK 540
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQCFNGQVQCALSKK 257
QF C G CIP WKCD DC D SDE P C +C+ S
Sbjct: 659 QFQCENGHCIPNRWKCDRENDC-GDWSDEKDCGDLHILPSPTPGPSTCLPNYYRCS-SGA 716
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCI 304
C+ +W+CD DC+ D +DE+ + +C + +C KKCI
Sbjct: 717 CVMDSWVCDGYRDCA-----DGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCI 771
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P+ CD DC D DE + +++ C E +C C+ LS+ CDG
Sbjct: 772 PNWRRCDGHQDCQ-----DGQDEA--NCPTRSSLTCTSWEFKCEDGETCIVLSERCDGFL 824
Query: 365 DCSNGEDE 372
DCS+ DE
Sbjct: 825 DCSDESDE 832
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 76/186 (40%), Gaps = 20/186 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 667 CIPNRWKCDRENDCGDWSDEKDCGDLHILPSPTPGP---STCLPNYYRCSSGACVMDSWV 723
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T + +C + +C KKCIP+ CD D
Sbjct: 724 CDGYRDC-ADGSDEEACPSPANVTAASTPTQLGRCDRFEFECRQPKKCIPNWRRCDGHQD 782
Query: 271 CSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
C D D + C + + +C + CI + CD +DCS + N E+ +
Sbjct: 783 C--QDGQDEANCPTRSSLTCTSWEFKCEDGETCIVLSERCDGFLDCSDESDERNCSEELN 840
Query: 331 KYFSHN 336
Y N
Sbjct: 841 VYKIQN 846
>gi|380012269|ref|XP_003690208.1| PREDICTED: sortilin-related receptor-like [Apis florea]
Length = 2152
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 89/189 (47%), Gaps = 22/189 (11%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + C P QF+C CIP SW CD DC D SDE N +C KC
Sbjct: 1081 PRVASTCAPNQFTCANDVCIPGSWHCDRDNDC-GDNSDEINCASLTSCTPNFEC--DGKC 1137
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
I +W+CD ++DC D DE K+ QC Q +C + +CI H W CD+E DC
Sbjct: 1138 ISKHWVCDFDVDCK-----DGKDEMNCKYPQCSESQFKCD-NGRCISHRWRCDDENDCR- 1190
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN 378
D +DE + C +E +C S C++ S CDG+ DC +G DE
Sbjct: 1191 ----DGSDEK-NCSKKEYPTTCRSDEFQCKSDKSCISKSWKCDGEKDCEDGSDE------ 1239
Query: 379 KADCENLKC 387
A C+++ C
Sbjct: 1240 -AKCDDMVC 1247
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 120/275 (43%), Gaps = 70/275 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-----KCIP 219
C +E +C S C++ S CDG+ DC +G DE + C QF+C + +CI
Sbjct: 1207 CRSDEFQCKSDKSCISKSWKCDGEKDCEDGSDEAKCDDMVCQSWQFTCNLMSKEKHRCIY 1266
Query: 220 ESWKCDGFVDCLEDGSDEPN--TCIH---------QCFNGQVQCALSKKCIPHNWLCDEE 268
SW CDG DC DGSDE N T +H C N C ++KC+P+ W CD
Sbjct: 1267 NSWVCDGDKDC-ADGSDEANCTTTVHPSVPLPNSNSCNNWMFMCN-NRKCVPYWWKCDSV 1324
Query: 269 MDCS--TDDIV--DNTDEDWDKFHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCST 318
DC +D+I + E+W + C Q QC L+ +CI +WLCD DC++
Sbjct: 1325 DDCGDDSDEIGCGNEEAEEWTVIYPTEQPKVCREHQFQC-LNGECIQDSWLCDGSNDCTS 1383
Query: 319 --DDI----VDNTDEDWDKYFSHNAVLCHP---------------NELRCGSS------- 350
D+I D++ D++ C P +EL C
Sbjct: 1384 GEDEIHCGSSDHSSCREDQFMCRMDGTCIPIRNVCNDVEECPDGSDELGCSEEQYSNPAA 1443
Query: 351 -------------NQCVALSKFCDGKPDCSNGEDE 372
+C+ L+++CDGK DC +G DE
Sbjct: 1444 TPSCFLGLFPCDETRCIPLAQYCDGKQDCVDGFDE 1478
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 70/259 (27%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C++ CD DC +G+DE +C+ QF C G+CI W+CD DC DGSD
Sbjct: 1136 KCISKHWVCDFDVDCKDGKDEMNCKYPQCSESQFKCDNGRCISHRWRCDDENDC-RDGSD 1194
Query: 237 EPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
E N + C + + QC K CI +W CD E DC D +DE C +
Sbjct: 1195 EKNCSKKEYPTTCRSDEFQCKSDKSCISKSWKCDGEKDCE-----DGSDEAKCDDMVCQS 1249
Query: 293 GQVQCALSKK----CIPHNWLCDEEMDC-------------------------------- 316
Q C L K CI ++W+CD + DC
Sbjct: 1250 WQFTCNLMSKEKHRCIYNSWVCDGDKDCADGSDEANCTTTVHPSVPLPNSNSCNNWMFMC 1309
Query: 317 -------------STDDIVDNTD---------EDWDK-YFSHNAVLCHPNELRCGSSNQC 353
S DD D++D E+W Y + +C ++ +C + +C
Sbjct: 1310 NNRKCVPYWWKCDSVDDCGDDSDEIGCGNEEAEEWTVIYPTEQPKVCREHQFQC-LNGEC 1368
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ S CDG DC++GEDE
Sbjct: 1369 IQDSWLCDGSNDCTSGEDE 1387
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM-GKCIP 219
+C ++ +C + +C+ S CDG DC++GEDE G ++ C QF C M G CIP
Sbjct: 1355 VCREHQFQC-LNGECIQDSWLCDGSNDCTSGEDEIHCGSSDHSSCREDQFMCRMDGTCIP 1413
Query: 220 ESWKCDGFVDCLEDGSDEPN---------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
C+ +C DGSDE CF G C +CIP CD + D
Sbjct: 1414 IRNVCNDVEEC-PDGSDELGCSEEQYSNPAATPSCFLGLFPCD-ETRCIPLAQYCDGKQD 1471
Query: 271 CSTDDIVDNTDE 282
C VD DE
Sbjct: 1472 C-----VDGFDE 1478
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPG 208
GS + C ++ C C+ + C+ +C +G DE P C G
Sbjct: 1391 GSSDHSSCREDQFMCRMDGTCIPIRNVCNDVEECPDGSDELGCSEEQYSNPAATPSCFLG 1450
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239
F C +CIP + CDG DC+ DG DE N
Sbjct: 1451 LFPCDETRCIPLAQYCDGKQDCV-DGFDESN 1480
>gi|126326518|ref|XP_001370262.1| PREDICTED: sortilin-related receptor [Monodelphis domestica]
Length = 2221
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +FSC G CI SW CDG
Sbjct: 1128 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRSDEFSCASGMCIRSSWVCDGD 1187
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1188 NDC-RDWSDEANCTAIFHTCEASSFQCH-NGHCIPQRWACDGDADCQ-----DGSDEDPI 1240
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1241 NCEKKCNG-FRCP-NGTCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRYMD 1287
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1288 FVCKNRQQCLFHSMVCDGIVQCRDGSDE 1315
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1085 CLRNQYRCSNGN-CINSIWWCDYDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1140
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + HQC + + CA S CI +W+CD + DC D
Sbjct: 1141 LSYKCDLEDDC-GDNSDESHCEAHQCRSDEFSCA-SGMCIRSSWVCDGDNDCR-----DW 1193
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE FH C QC + CIP W CD + DC D +DED
Sbjct: 1194 SDEANCTAIFHTCEASSFQCH-NGHCIPQRWACDGDADCQ-----DGSDED--------P 1239
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
+ C N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 1240 INCEKKCNGFRC-PNGTCIPSSKHCDGLHDCSDGSDEQHCEPLCTRYMD 1287
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 100/242 (41%), Gaps = 52/242 (21%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCI 218
+C RC + C++L CDG DC + DE N P QF C G CI
Sbjct: 1331 VCDQFSFRC-QNGVCISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFQCENGHCI 1389
Query: 219 PESWKCDGFVDCLEDGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNW 263
P WKCD DC D SDE P+TC+ F +C S CI ++W
Sbjct: 1390 PNRWKCDKENDC-GDWSDEKDCGDAHLLPPSTAAPSTCLPNYF----RCN-SGACIMNSW 1443
Query: 264 LCDEEMDCSTDDIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLC 310
CD DC+ D +DE+ + +C + +C KKCIP+ C
Sbjct: 1444 ACDGYKDCT-----DGSDEEACPTAANVSSTSTATQLGRCSRFEFECQQPKKCIPNWKRC 1498
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DC D DE +H+ + C C C+ L++ CDG DCS+G
Sbjct: 1499 DGHQDCR-----DGMDES--NCPTHSTLTCVSGRYMCEDGEACIVLTERCDGFLDCSDGS 1551
Query: 371 DE 372
DE
Sbjct: 1552 DE 1553
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1085 CLRNQYRCSNGNCINSIWWCDYDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1143
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + CA S CI +W+CD + DC
Sbjct: 1144 KCDLEDDCG-----DNSDESHCEAHQCRSDEFSCA-SGMCIRSSWVCDGDNDC------- 1190
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1191 ---RDWSDEANCTAIFHTCEASSFQC-HNGHCIPQRWACDGDADCQDGSDEDPI-NCEKK 1245
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1246 CNGFRCPNGTCIPSSK 1261
>gi|332230909|ref|XP_003264636.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Nomascus leucogenys]
Length = 961
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 142/395 (35%), Gaps = 105/395 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C + +C+ CD D S+ DE C F+C G CI E WKC
Sbjct: 66 CEKDQFQC-RNERCIPSVWRCDEDDDFSDHSDEDDCPKKTCADSDFTCDNGHCIHERWKC 124
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC Q C ++ C S KC+P +W CD E DC
Sbjct: 125 DGEEEC-PDGSDESKATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCE--------- 174
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA---V 338
G + + C PH + C C V + D+D
Sbjct: 175 ----------GGADEADCATLCAPHEFQCGNR-SCLAAVFVCDGDDDCGDGSDERGCADP 223
Query: 339 LCHPNELRCG--------------------------------SSNQCVALSKFCDGKPDC 366
C P E RCG S +CV L CDG DC
Sbjct: 224 ACGPREFRCGGDGGGGGGACIPERWVXXXXXAACATASQFACRSGECVHLGWRCDGDRDC 283
Query: 367 SNGEDEG--PF---------------------CNNKADC------------------ENL 385
+ DE P CN + DC N
Sbjct: 284 KDKSDEADCPLGTCRGDEFQCGDGTCVLAIKRCNQEQDCPDGSDEAGCLQGLNECLHNNG 343
Query: 386 KCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C GY
Sbjct: 344 GCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYPGY 403
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C A + S+IF++ ++RRI L
Sbjct: 404 EMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 435
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD D D SDE + C + C + CI W
Sbjct: 65 ECEKDQFQCRNERCIPSVWRCDEDDD-FSDHSDEDDCPKKTCADSDFTCD-NGHCIHERW 122
Query: 264 LCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDD 320
CD E +C D +DE C ++ C S KC+P +W CD E DC
Sbjct: 123 KCDGEEECP-----DGSDESKATCTKQVCPAEKLSCGPTSHKCVPASWRCDGEKDCE--- 174
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
DE + A LC P+E +CG+ + A+
Sbjct: 175 --GGADE------ADCATLCAPHEFQCGNRSCLAAV 202
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 562 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 619
>gi|195553795|ref|XP_002076755.1| GD24659 [Drosophila simulans]
gi|194202745|gb|EDX16321.1| GD24659 [Drosophila simulans]
Length = 838
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 119/289 (41%), Gaps = 58/289 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPG-QFSCGMGKCIPES 221
C ++ +C SS +C+ S CDG DC +G DE P C P +FSC G+CIP+
Sbjct: 260 CPLSDFKCKSSGRCILDSWRCDGDADCKDGSDEDPAVCFKRTCDPKTEFSCKNGRCIPQL 319
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA--LSKKCIPHNWLCDEEMDCSTDDIV 277
W CD DC +D SDEP Q C G +C + +CIP CD + DC
Sbjct: 320 WMCDFDNDCGDD-SDEPAYMCRQRNCTTGWQRCPGQSNYRCIPKWLFCDGKDDCR----- 373
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
DN+DE + +C + +CIP W+CD DC D +DE+ +
Sbjct: 374 DNSDELPENCPKCNPETDFKCGNNRCIPKQWMCDFADDCG-----DASDEN-EAVCKGRY 427
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----EGPFCNNKA------------- 380
C +E RCG+ +C++ CD + DC + D EG C N
Sbjct: 428 RECSESEFRCGNG-KCISSRWQCDHEDDCGDNSDEMHCEGYQCKNGTFQCASVQVVLHRN 486
Query: 381 ---------------------DCENLKCSHKCSPTPRGAMCFCPAGQNP 408
C+N CSH C P G C CP P
Sbjct: 487 LVNPSGLKVYHDKRYNTSLPNPCDNSTCSHLCLLVPGGHRCACPDASGP 535
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCL 231
G +C+ CDG+ DC +G DE C C G F C C P + CDG DC
Sbjct: 189 GRDEKCIPWFWKCDGEKDCKDGSDEPATCAPRHCRAGTFQCKNTNCTPSATICDGVDDC- 247
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK-FHQC 290
D SDE N C C +C S +CI +W CD + DC D +DED F +
Sbjct: 248 GDRSDEQN-CDLPCPLSDFKCKSSGRCILDSWRCDGDADCK-----DGSDEDPAVCFKRT 301
Query: 291 FNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC-G 348
+ + + + + +CIP W+CD + DC D++DE N C RC G
Sbjct: 302 CDPKTEFSCKNGRCIPQLWMCDFDNDCG-----DDSDEPAYMCRQRN---CTTGWQRCPG 353
Query: 349 SSN-QCVALSKFCDGKPDCSNGEDEG----PFCNNKAD--CENLKCSHK 390
SN +C+ FCDGK DC + DE P CN + D C N +C K
Sbjct: 354 QSNYRCIPKWLFCDGKDDCRDNSDELPENCPKCNPETDFKCGNNRCIPK 402
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 81/185 (43%), Gaps = 19/185 (10%)
Query: 201 CNAECTPGQFSCGMG--KCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKK 257
C A CT GQ CG KCIP WKCDG DC +DGSDEP TC C G QC +
Sbjct: 176 CVANCTAGQHLCGGRDEKCIPWFWKCDGEKDC-KDGSDEPATCAPRHCRAGTFQCK-NTN 233
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C P +CD DD D +DE C +C S +CI +W CD + DC
Sbjct: 234 CTPSATICD-----GVDDCGDRSDEQNCDL-PCPLSDFKCKSSGRCILDSWRCDGDADCK 287
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
D +DED F C P + +C+ CD DC + DE +
Sbjct: 288 -----DGSDEDPAVCFKRT---CDPKTEFSCKNGRCIPQLWMCDFDNDCGDDSDEPAYMC 339
Query: 378 NKADC 382
+ +C
Sbjct: 340 RQRNC 344
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 64/146 (43%), Gaps = 19/146 (13%)
Query: 240 TCIHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQC 297
TC+ C GQ C +KCIP W CD E DC D +DE C G QC
Sbjct: 175 TCVANCTAGQHLCGGRDEKCIPWFWKCDGEKDCK-----DGSDEPATCAPRHCRAGTFQC 229
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ C P +CD DD D +DE + + C ++ +C SS +C+ S
Sbjct: 230 K-NTNCTPSATICD-----GVDDCGDRSDE------QNCDLPCPLSDFKCKSSGRCILDS 277
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCE 383
CDG DC +G DE P K C+
Sbjct: 278 WRCDGDADCKDGSDEDPAVCFKRTCD 303
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 112 GMHGENRSPLVTKN--IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
GM G N S ++ N I WP++L IDY D +YW D+HL+ + ++G H +
Sbjct: 2 GMDGSNFSRILNWNDGIAWPNALSIDYFTDRIYWADAHLDYIAYADLEGRHRHTV 56
>gi|341884809|gb|EGT40744.1| hypothetical protein CAEBREN_10644 [Caenorhabditis brenneri]
Length = 389
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 81/185 (43%), Gaps = 48/185 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-----------CFNGQV 250
N C GQF C G+CI W CDG DC DGSDE +H+ CF Q
Sbjct: 20 NEACDDGQFRCNDGRCITNDWVCDGARDC-TDGSDE----VHEACDRHLNKNSSCFGNQP 74
Query: 251 QCALS--KKCIPHNWLCDEEMDC-STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
+C +CIPH WLCD DC + +D + T DW + + + Q L++K
Sbjct: 75 ECKKHGLARCIPHEWLCDGHPDCDAGEDEFNCTSIDWFRHPESLMRKYQSQLAEKST--- 131
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
KYF + C +E RC SS C+ ++ CDGK DC
Sbjct: 132 ----------------------TKYFGY----CQEDEYRCESSGNCLKRNQVCDGKLDCG 165
Query: 368 NGEDE 372
+GEDE
Sbjct: 166 DGEDE 170
>gi|431842055|gb|ELK01404.1| Sortilin-related receptor [Pteropus alecto]
Length = 2210
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1117 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCERHQCRKDEYNCSSGMCIRSSWVCDGD 1176
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1177 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDEDPI 1229
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1230 NCEKKCNG-FRCP-NGTCIPSSKHCDGLQDCS-----DGSDEQ------HCEPLCTRFMD 1276
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1277 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1304
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1074 CLFNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1129
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + HQC + C+ S CI +W+CD + DC D
Sbjct: 1130 LSYKCDLEDDC-GDNSDESHCERHQCRKDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1182
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD +MDC D +DED
Sbjct: 1183 SDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDED--------P 1228
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
+ C N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 1229 INCEKKCNGFRC-PNGTCIPSSKHCDGLQDCSDGSDEQHCEPLCTRFMD 1276
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1333 CISLIWKCDGMDDCGDYSDEANCENPTELPNCSRYFQFQCENGHCIPNRWKCDRENDC-G 1391
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1392 DWSDERDCGDSHILPSPTPGPSTCPPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1445
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ + +C + +C KKCIP+ CD DC D DE
Sbjct: 1446 EEVCPSPANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1500
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E +C S C+ LS+ CDG DCS+ DE
Sbjct: 1501 --NCPTHSTLTCMSREFKCEDSETCILLSERCDGFLDCSDESDE 1542
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 134/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 939 IERITFSGQRRS-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMAILAS 995
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKPD------CSNGEDEGPFCNA----E 204
+ + SN CV S C K + C G + E
Sbjct: 996 QLTGLMDMKIFYKGKTTGSNACVPRPCSLLCLPKANNSKSCRCPEGVSSSVLPSGDLMCE 1055
Query: 205 CTPG------------------QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G Q+ C G CI W CD DC D SDE N C
Sbjct: 1056 CPQGYQLRNNTCVKEENTCLFNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1114
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + C+ S CI
Sbjct: 1115 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCERHQCRKDEYNCS-SGMCIR 1168
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1169 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-HNGHCIPQRWACDGD 1217
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1218 MDCQDGSDEDPI-NCEKKCNGFRCPNGTCIPSSK 1250
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1377 CIPNRWKCDRENDCGDWSDERDCGDSHILPSPTPGP---STCPPNYYRCSSGACVMDSWV 1433
Query: 224 CDGFVDCLEDGSDE---PN----------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE P+ T + +C + +C KKCIP+ CD D
Sbjct: 1434 CDGYRDC-ADGSDEEVCPSPANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQD 1492
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C S+ CI + CD +DCS
Sbjct: 1493 CQ-----DGQDEANCPTHSTLTCMSREFKCEDSETCILLSERCDGFLDCS 1537
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ K CDG DC +G+DE C +F C + CI
Sbjct: 1467 CDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCMSREFKCEDSETCILL 1526
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1527 SERCDGFLDC-SDESDE 1542
>gi|355567149|gb|EHH23528.1| hypothetical protein EGK_07005, partial [Macaca mulatta]
Length = 1901
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 808 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 867
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 868 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 920
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 921 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 967
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 968 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 995
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 765 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 823
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 824 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 876
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 877 ANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 922
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 923 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 967
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L H
Sbjct: 630 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAH 686
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKP------------------------D 190
+ + SN CV S C K D
Sbjct: 687 QLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLMCD 746
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 747 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 805
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 806 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 859
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 860 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 908
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 909 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 941
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1024 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGD 1083
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ + +C+ S C+ W+CD DC+ D
Sbjct: 1084 WTDEKDCGDSHILPFSTPAPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA-----D 1133
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1134 GSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DGR 1188
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1189 DEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1233
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 954 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1013
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1014 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1071
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1072 RWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1130
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1131 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1185
Query: 368 NGEDEG 373
+G DE
Sbjct: 1186 DGRDEA 1191
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 585 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 642
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS + +A + F GK
Sbjct: 643 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 702
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 703 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 760
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 761 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQE 814
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 815 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 862
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 863 VCDGDNDCRDWSDEA 877
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1060 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCSSGTC 1118
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1119 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1177
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1178 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1228
>gi|297472284|ref|XP_002685831.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Bos taurus]
gi|296490130|tpg|DAA32243.1| TPA: heparan sulfate proteoglycan 2 [Bos taurus]
Length = 4389
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIP 219
V C P+E C S C+ CDG+ DC++G DE GP C P +F CG G C
Sbjct: 273 VPCGPHEAAC-HSGHCIPKDYVCDGQEDCADGSDEADCGP--TPPCEPNEFPCGNGHCAL 329
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ W+CDG DC ED +DE + + + C + +C + CIP ++ CDEE DC
Sbjct: 330 KLWRCDGDFDC-EDHTDEADCPVKRPEDVCGPTKFRCVSTNTCIPASFHCDEESDCP--- 385
Query: 276 IVDNTDE 282
D +DE
Sbjct: 386 --DRSDE 390
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 20/215 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C N+CVAL CD +PDC + DE T +G P +
Sbjct: 189 CTEAEFACHRYNECVALEYRCDRRPDCRDMSDELDCEEPMPTLSSQPPPLGATPPPPAQP 248
Query: 225 DGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ + P + C + C S CIP +++CD + DC+ D
Sbjct: 249 ESLPSQQRPATPAPQAALPSPGRPVPCGPHEAACH-SGHCIPKDYVCDGQEDCA-----D 302
Query: 279 NTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE D C + C + C W CD + DC D+TDE D
Sbjct: 303 GSDEADCGPTPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DHTDEA-DCPVKRPE 355
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 356 DVCGPTKFRCVSTNTCIPASFHCDEESDCPDRSDE 390
>gi|119888979|ref|XP_582024.3| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Bos taurus]
Length = 4391
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 66/127 (51%), Gaps = 16/127 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIP 219
V C P+E C S C+ CDG+ DC++G DE GP C P +F CG G C
Sbjct: 275 VPCGPHEAAC-HSGHCIPKDYVCDGQEDCADGSDEADCGP--TPPCEPNEFPCGNGHCAL 331
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ W+CDG DC ED +DE + + + C + +C + CIP ++ CDEE DC
Sbjct: 332 KLWRCDGDFDC-EDHTDEADCPVKRPEDVCGPTKFRCVSTNTCIPASFHCDEESDCP--- 387
Query: 276 IVDNTDE 282
D +DE
Sbjct: 388 --DRSDE 392
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/215 (27%), Positives = 85/215 (39%), Gaps = 20/215 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C N+CVAL CD +PDC + DE T +G P +
Sbjct: 191 CTEAEFACHRYNECVALEYRCDRRPDCRDMSDELDCEEPMPTLSSQPPPLGATPPPPAQP 250
Query: 225 DGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+ + P + C + C S CIP +++CD + DC+ D
Sbjct: 251 ESLPSQQRPATPAPQAALPSPGRPVPCGPHEAACH-SGHCIPKDYVCDGQEDCA-----D 304
Query: 279 NTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE D C + C + C W CD + DC D+TDE D
Sbjct: 305 GSDEADCGPTPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DHTDEA-DCPVKRPE 357
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 358 DVCGPTKFRCVSTNTCIPASFHCDEESDCPDRSDE 392
>gi|297690488|ref|XP_002822655.1| PREDICTED: LOW QUALITY PROTEIN: sortilin-related receptor [Pongo
abelii]
Length = 2212
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1119 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1178
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1179 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1231
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1232 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1278
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1279 FVCKNRQQCLFHSMVCDGIVQCRDGSDE 1306
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 1076 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1134
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1135 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 1187
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 1188 ANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 1233
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1234 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1278
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1076 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1134
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1135 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1181
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1182 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1236
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1237 CNGFRCPNGTCIPSSK 1252
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1335 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1393
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1394 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1443
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1444 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DG 1498
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DC + DE
Sbjct: 1499 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCLDESDE 1544
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1265 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIVQCRDGSDEDAAFAGCSQDPEFHKVCD 1324
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1325 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1382
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1383 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1441
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1442 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1496
Query: 368 NGEDEG 373
+G DE
Sbjct: 1497 DGRDEA 1502
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 78/186 (41%), Gaps = 39/186 (20%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1371 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1429
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1430 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1488
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
CD DC D DE H C + + QC + CI + CD +DC
Sbjct: 1489 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDC----- 1538
Query: 322 VDNTDE 327
+D +DE
Sbjct: 1539 LDESDE 1544
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ K CDG DC +G DE C +F C G+ CI
Sbjct: 1469 CDRFEFECHQPKKCIPNWKRCDGHRDCQDGRDEANCPTHSTLTCMSREFQCEDGEACIVL 1528
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DCL D SDE
Sbjct: 1529 SERCDGFLDCL-DESDE 1544
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 110/291 (37%), Gaps = 60/291 (20%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 896 LKPGIYRSNMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 953
Query: 164 LC----HP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
+ HP NE+ +Q LS F K S E Q +
Sbjct: 954 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKHSGSQ---------MEILANQLTG 1001
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQC----ALSKKCIPHNWLC 265
M I K G C+ P C C N C +S +P
Sbjct: 1002 LMDMKIFYKGKNTGSNACV------PRPCSLLCLPKANNSRSCRCPEGVSSSVLPSG--- 1052
Query: 266 DEEMDCSTDDIVDN---TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D DC + N E+ + C Q +C+ + CI W CD + DC
Sbjct: 1053 DLMCDCPQGYQLKNNTCVKEE----NTCLRNQYRCS-NGNCINSIWWCDFDNDCG----- 1102
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1103 DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1148
>gi|281347830|gb|EFB23414.1| hypothetical protein PANDA_001970 [Ailuropoda melanoleuca]
Length = 2156
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 1083 TQFRCQESGTCIPLSYKCDLEDDCGDNSDETHCEMHQCRSDEYSCSSGMCIRSSWVCDGD 1142
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1143 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1195
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D DE H LC +
Sbjct: 1196 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGADEQ------HCEPLCTRFMD 1242
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1243 FVCKNHQQCLFHSMVCDGIVQCRDGSDE 1270
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1299 CISLIWKCDGMDDCGDYSDEASCENPTEAPNCSHYFQFQCDNGHCIPNRWKCDRENDC-G 1357
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1358 DWSDERDCGDSHILPSPTPGPSTCLPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1411
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ +C + +C KKCIP+ CD DC D DE
Sbjct: 1412 EEACPSPANVTTASVPTHHGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1466
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1467 --NCPTHSTLTCMSTEFKCEDGEACIVLSERCDGFLDCSDESDE 1508
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 139/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS AVL
Sbjct: 905 IERITFDGQQRS-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKHSGSQMAVLAS 961
Query: 167 P----------NELRCGSSNQCVAL------------SKFC---DGKP-----------D 190
+ + SN CV+ S+ C DG +
Sbjct: 962 QLTGLMDMKIFYKGKTMGSNACVSRPCSLLCLPRANNSRSCRCPDGVASSVLPSGDLMCE 1021
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + E C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1022 CPQGYQRENNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTVCD 1080
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1081 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDETHCEMHQCRSDEYSCS-SGMCIR 1134
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1135 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1183
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1184 MDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1216
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 129/316 (40%), Gaps = 69/316 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + DG ++
Sbjct: 860 LKPGIYRSNMDGTAVHCLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFDGQQRSI 917
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS +A + F GK
Sbjct: 918 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSGSQMAVLASQLTGLMDMKIFYKGKT 977
Query: 190 DCSNGEDEGPFCNAECTP---GQFSC----GMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
SN P C+ C P SC G+ + S D +C + E NTC+
Sbjct: 978 MGSNACVSRP-CSLLCLPRANNSRSCRCPDGVASSVLPS--GDLMCECPQGYQRENNTCV 1034
Query: 243 HQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCA 298
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1035 KEENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTVCDLDTQFRCQ 1088
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALS 357
S CIP ++ CD E DC DN+DE +H C +E C SS C+ S
Sbjct: 1089 ESGTCIPLSYKCDLEDDCG-----DNSDE------THCEMHQCRSDEYSC-SSGMCIRSS 1136
Query: 358 KFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1137 WVCDGDNDCRDWSDEA 1152
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 69/170 (40%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1343 CIPNRWKCDRENDCGDWSDERDCGDSHILPSPTPGP---STCLPNYYRCSSGACVMDSWV 1399
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T +C + +C KKCIP+ CD D
Sbjct: 1400 CDGYRDC-ADGSDEEACPSPANVTTASVPTHHGRCDRFEFECHQPKKCIPNWKRCDGHQD 1458
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1459 CQ-----DGQDEANCPTHSTLTCMSTEFKCEDGEACIVLSERCDGFLDCS 1503
>gi|149412874|ref|XP_001507735.1| PREDICTED: very low-density lipoprotein receptor-like
[Ornithorhynchus anatinus]
Length = 650
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 109/239 (45%), Gaps = 30/239 (12%)
Query: 243 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
+C Q QC+ + +CI W CD + DCS D +DE C C + +
Sbjct: 23 EKCEVSQFQCS-NGRCITLLWKCDGDEDCS-----DGSDESSCVKKTCAESDFVCN-NGQ 75
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCD 361
C+P+ W CD + DC D +DE ++ C NE+ CG+ S QC+ +S CD
Sbjct: 76 CVPNRWQCDGDPDCE-----DGSDESPEQCHMRT---CRINEISCGAGSTQCIPVSWKCD 127
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECL 420
G+ DC + EDE + S++C C AG + ++ C D DEC
Sbjct: 128 GESDCDSEEDEENCXXXXXXXXXVVDSYECD---------CAAGFELIDRKTCGDIDECQ 178
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
G C Q C N Y C C+ GY + C A+ EP S+IF++ DIR+I L
Sbjct: 179 NPGICSQICINLKGGYKCECSRGYQMDLATGVCKAIG---KEP-SLIFTNRRDIRKIGL 233
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 65/114 (57%), Gaps = 5/114 (4%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C S+ +C+ L CDG DCS+G DE C F C G+C+P W+C
Sbjct: 25 CEVSQFQC-SNGRCITLLWKCDGDEDCSDGSDESSCVKKTCAESDFVCNNGQCVPNRWQC 83
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDD 275
DG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +++
Sbjct: 84 DGDPDC-EDGSDESPEQCHMRTCRINEISCGAGSTQCIPVSWKCDGESDCDSEE 136
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C QF C G+CI WKCDG DC DGSDE + C C + +C+P+ W
Sbjct: 24 KCEVSQFQCSNGRCITLLWKCDGDEDC-SDGSDESSCVKKTCAESDFVCN-NGQCVPNRW 81
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTDD 320
CD + DC D +DE ++ H C ++ C A S +CIP +W CD E DC +++
Sbjct: 82 QCDGDPDCE-----DGSDESPEQCHMRTCRINEISCGAGSTQCIPVSWKCDGESDCDSEE 136
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD----------- 105
+A+++ ++N + + +S L + L NS DL P +D
Sbjct: 296 AIAVDWIYKNIYWTDVASKTISVASLDGTKRKILFNS-DLREPTSIAVDPLSGFAYWSDW 354
Query: 106 ---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA 162
++EKAGM+G +R LVT +IQWP+ + +D + LYW DS L+ + SV ++G
Sbjct: 355 GEPAKIEKAGMNGFDRRQLVTTDIQWPNGITLDLVKSRLYWLDSKLHMLSSVDLNGQDRR 414
Query: 163 VLCHPNEL 170
++ E
Sbjct: 415 IVLKSLEF 422
>gi|397498500|ref|XP_003820019.1| PREDICTED: sortilin-related receptor [Pan paniscus]
Length = 2214
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +F+C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + C+P + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCVPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEFNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + CV SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCVPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1446 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1137 KCDLEDDCG-----DNSDESHCEMHQCRSDEFNCS-SGMCIRSSWVCDGDNDC------- 1183
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1184 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1238
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1239 CNGFRCPNGTCVPSSK 1254
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 60/291 (20%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 955
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S E Q +
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQ---------MEILANQLTG 1003
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQC----ALSKKCIPHNWLC 265
M I K G C+ P C C N C +S +P
Sbjct: 1004 LMDMKIFYKGKNTGSNACV------PRPCSLLCLPKANNSRSCRCPEGVSSSVLPSG--- 1054
Query: 266 DEEMDCSTDDIVDN---TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D DC + N E+ + C Q +C+ + CI W CD + DC
Sbjct: 1055 DLMCDCPQGYQLKNNTCVKEE----NTCLRNQYRCS-NGNCINSIWWCDFDNDCG----- 1104
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1105 DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1150
>gi|195448993|ref|XP_002071901.1| GK24915 [Drosophila willistoni]
gi|194167986|gb|EDW82887.1| GK24915 [Drosophila willistoni]
Length = 4180
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 36/225 (16%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIP 219
N+++C PNE RC + +C++ K CD DCS GEDE C A C+ ++ C G +CI
Sbjct: 74 NSMVCQPNEFRC-HNGECISSDKHCDNVSDCSEGEDENEDCAAACSAMEYQCRDGTRCIS 132
Query: 220 ESWKCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
S +CDG DC DG DE + + C G+ C CI CD DC
Sbjct: 133 SSQQCDGHPDC-SDGDDEEHCDGIVPKLRYTCPKGKFTCR-DLSCISIVHRCDGRADCPQ 190
Query: 274 DDIVDNTDED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D +DE+ +DK+ QC +G CI LC+ +DC D +DE
Sbjct: 191 ----DRSDEEGCPCLYDKW-QCDDG--------TCIAKELLCNGNIDCPEDI----SDER 233
Query: 329 W-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ D + + C NE RCG+ +C+ + + CD DC++ DE
Sbjct: 234 YCDGGYDEDE--CRFNEFRCGTG-ECIPMRQVCDNIYDCADNSDE 275
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 117/266 (43%), Gaps = 60/266 (22%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------PFCNAECTPGQFSCGMG 215
A C E +C +C++ S+ CDG PDCS+G+DE P C G+F+C
Sbjct: 114 AAACSAMEYQCRDGTRCISSSQQCDGHPDCSDGDDEEHCDGIVPKLRYTCPKGKFTCRDL 173
Query: 216 KCIPESWKCDGFVDCLEDGSDEPN-TCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CI +CDG DC +D SDE C++ QC +G CI LC+ +DC
Sbjct: 174 SCISIVHRCDGRADCPQDRSDEEGCPCLYDKWQCDDG--------TCIAKELLCNGNIDC 225
Query: 272 STDDIVDNT--DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDI------ 321
+DI D D +D+ +C + +C + +CIP +CD DC+ +D++
Sbjct: 226 P-EDISDERYCDGGYDE-DECRFNEFRCG-TGECIPMRQVCDNIYDCADNSDELNCGKGH 282
Query: 322 ------VDNTDEDWDKYFSHNAVLCHP----------------NELRCGSSNQCVALSKF 359
+D D + ++ N +P N+ +C S+N C+ L
Sbjct: 283 YGDRPRLDGDDAKEYEVYTPNGYEAYPPKNVYVKVNSDSVCSSNQFKCTSANICIPLHMR 342
Query: 360 CDGKPDCSNGEDEGPFCNNKADCENL 385
CDG C++ DE DCEN
Sbjct: 343 CDGYYHCNDMSDE-------RDCENY 361
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 99/237 (41%), Gaps = 52/237 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
C ++ +C C+ ++ CDGK C +G DE P +C Q+ C
Sbjct: 487 CSSDKYKCQRGGGCIPKTQVCDGKSQCYDGSDESACHFHARFNQSRPI--VDCMSFQYQC 544
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH----------QCFNGQVQCALS------K 256
G G CI +C+G DC DG+DE N H + ++ C ++
Sbjct: 545 GDGSCISGYKRCNGITDC-ADGADENNCLFHYPDETEDYDDRYDTDEMPCDVTDVLCDDN 603
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+C+P+ CD +DC D TDE C + + +C CIP + LC+ ++
Sbjct: 604 RCLPYEKKCDGIIDCD-----DRTDEASCPGTENCLDSEFEC--DDYCIPLDQLCNGIVN 656
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ D DE HN C C + + C+ S+ C+G DCS+ DE
Sbjct: 657 CN-----DGNDE-------HNCSFCRDGAHLCNNGD-CIVPSRLCNGIIDCSDASDE 700
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 54/110 (49%), Gaps = 12/110 (10%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
C+ CDG CS+G DE + +C P QF C KC+ +W+CDG DC D SD
Sbjct: 1162 CIDKRNICDGTLHCSDGSDEHSCSHGRKCQPNQFLCDNSKCVERTWRCDGENDC-GDNSD 1220
Query: 237 EPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
E + C + QC S CIP ++ CD+ DC +D +DE
Sbjct: 1221 EASCDTEASDTPCRFNEFQCR-SGHCIPKSFQCDDVPDC-----IDGSDE 1264
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 82/204 (40%), Gaps = 29/204 (14%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F+C CIP CDG DC D ++ + + C + + +C CIP +CD +
Sbjct: 453 EFACHNRDCIPIESVCDGIDDC--DQHEDEDYMLCNCSSDKYKCQRGGGCIPKTQVCDGK 510
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNG----------QVQCALSKKCIPHNWLCDEEMDCST 318
C D +DE FH FN Q QC CI C+ DC+
Sbjct: 511 SQC-----YDGSDESACHFHARFNQSRPIVDCMSFQYQCG-DGSCISGYKRCNGITDCAD 564
Query: 319 DDIVDN-------TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
+N ED+D + + + C ++ C N+C+ K CDG DC + D
Sbjct: 565 GADENNCLFHYPDETEDYDDRYDTDEMPCDVTDVLC-DDNRCLPYEKKCDGIIDCDDRTD 623
Query: 372 EG--PFCNNKADCENLKCSHKCSP 393
E P N D E +C C P
Sbjct: 624 EASCPGTENCLDSE-FECDDYCIP 646
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 94/228 (41%), Gaps = 40/228 (17%)
Query: 178 CVALSKFCDGKPDCSNGEDEG-PFCNAECTPGQFSCGM-GKCIPESWKCDGFVDCLEDGS 235
C+ + CDG DC EDE CN C+ ++ C G CIP++ CDG C DGS
Sbjct: 461 CIPIESVCDGIDDCDQHEDEDYMLCN--CSSDKYKCQRGGGCIPKTQVCDGKSQCY-DGS 517
Query: 236 DEPNTCIHQCFNG----------QVQCALSKKCIPHNWLCDEEMDCSTDDIVDN-----T 280
DE H FN Q QC CI C+ DC+ +N
Sbjct: 518 DESACHFHARFNQSRPIVDCMSFQYQCG-DGSCISGYKRCNGITDCADGADENNCLFHYP 576
Query: 281 DEDWDKFHQCFNGQVQCALS------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
DE D + ++ C ++ +C+P+ CD +DC D+ D+
Sbjct: 577 DETEDYDDRYDTDEMPCDVTDVLCDDNRCLPYEKKCDGIIDC---------DDRTDEASC 627
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNNKA 380
C +E C + C+ L + C+G +C++G DE FC + A
Sbjct: 628 PGTENCLDSEFEC--DDYCIPLDQLCNGIVNCNDGNDEHNCSFCRDGA 673
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N + C + RC C++ CD P C +G DE EC QF C G+C+
Sbjct: 843 QNCIGCAAGQFRC-RDGHCISQEAVCDNYPQCPDGSDEADCHTGECLSNQFRCRNGQCVS 901
Query: 220 ESWKCDGFVDCLEDGSDE 237
+ +C+ DCL DGSDE
Sbjct: 902 AAARCNRQTDCL-DGSDE 918
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 91/248 (36%), Gaps = 36/248 (14%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C E C C+ S+ CDG DC + DE C GQF C G CI
Sbjct: 805 RNCTQCKELEFLCYDQQYCINASQHCDGYYDCKDFSDEQNCIG--CAAGQFRCRDGHCIS 862
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+ CD + C DGSDE + +C + Q +C + +C+ C+ + DC +D
Sbjct: 863 QEAVCDNYPQC-PDGSDEADCHTGECLSNQFRCR-NGQCVSAAARCNRQTDC-----LDG 915
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE C + V + + ++
Sbjct: 916 SDE-----QSCGHSTV--------LSTTITATTTTTTTNIPTTATMPSIHSTSVPAFRII 962
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNNKADCENLKCSHKCSP----- 393
C RC C+AL+ C+G DC P+ +++ DC L S++ P
Sbjct: 963 CPSTTFRC-EKGPCIALALHCNGHVDC-------PYDASDELDCPGLTLSNEIDPNEPAN 1014
Query: 394 TPRGAMCF 401
TPR +
Sbjct: 1015 TPRNQLLL 1022
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 66/169 (39%), Gaps = 55/169 (32%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C Q +C G CI + CDG + C DGSDE H C +G +KC P+ +L
Sbjct: 1150 CNEHQATCMNGDCIDKRNICDGTLHC-SDGSDE-----HSCSHG-------RKCQPNQFL 1196
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
CD + KC+ W CD E DC DN
Sbjct: 1197 CD---------------------------------NSKCVERTWRCDGENDCG-----DN 1218
Query: 325 TDEDW-DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE D S C NE +C S C+ S CD PDC +G DE
Sbjct: 1219 SDEASCDTEASDTP--CRFNEFQC-RSGHCIPKSFQCDDVPDCIDGSDE 1264
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 84/222 (37%), Gaps = 50/222 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
C+ L + C+G +C++G DE FC G C G CI S C+G +DC D S
Sbjct: 644 CIPLDQLCNGIVNCNDGNDEHNCSFCRD----GAHLCNNGDCIVPSRLCNGIIDC-SDAS 698
Query: 236 DE---------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN---TDED 283
DE PN C + F C+ + C+ ++DC+ +N T D
Sbjct: 699 DERQCVTTRLTPNDCTSEEF------FCDDLCLNRSKRCNGQIDCNDHSDENNCPQTAHD 752
Query: 284 WDKFHQCF-----NGQVQCAL--------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
Q + + Q L S KC + CD C DN+DE
Sbjct: 753 ARYPSQYYPHSHTHTQTHSLLPCPQHTCPSGKCYTESERCDGRQHCE-----DNSDE--- 804
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C E C C+ S+ CDG DC + DE
Sbjct: 805 ----RNCTQCKELEFLCYDQQYCINASQHCDGYYDCKDFSDE 842
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 326 DEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E Y S+ N+++C PNE RC + +C++ K CD DCS GEDE
Sbjct: 63 NEARGSYLSYGNSMVCQPNEFRC-HNGECISSDKHCDNVSDCSEGEDE 109
>gi|350402145|ref|XP_003486382.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein-like [Bombus impatiens]
Length = 4443
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 128/287 (44%), Gaps = 30/287 (10%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
M C +G V C K C+P + LC+ +C D +DE+ LN +
Sbjct: 1723 MPGSCPHGYVACTRDKDCVPQSSLCNGVPECR-----DRSDEENCYGESHHLNLKTYPSE 1777
Query: 61 EFNHRNQSLCFI-QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRS 119
+ ++ + F + + + ++R + N+L LP P ++ RLE + E+
Sbjct: 1778 QLIKESREVVFQCRDEGLLRAKVRWLRGNNL----PLP-PGSRDVNGRLEIPNIQLEHSG 1832
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
+ + + +PSS Q + + TVE ++ C +E C S+ +C+
Sbjct: 1833 VYICEAVGYPSSTP---GQQVSVYL-----TVEKFEPPPTNKPHACQYDEATC-SNGECI 1883
Query: 180 ALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-- 237
S C+G+ DC++G DE C P QF C +C+ + W+CDG DC DGSDE
Sbjct: 1884 PKSYVCNGRLDCTDGSDEMRCSPHGCEPNQFRCNNTECVSKVWRCDGDKDCA-DGSDEED 1942
Query: 238 --PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
PN C + C +CIP ++ CD E DC +D +DE
Sbjct: 1943 CAPNAPGTPCRFTEFACGSHDQCIPKSYHCDLERDC-----IDGSDE 1984
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 105/224 (46%), Gaps = 25/224 (11%)
Query: 156 VDGS--HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
+DGS H+ +C P E +C +S +C+A + CD C++G DE EC G+ C
Sbjct: 1554 LDGSDEHDCGVCTPAEWKC-ASGECIAEIERCDNVTHCADGSDE---IGCECPNGERPCD 1609
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
G CI +++ CD +DC DGSDE + T +C + C CIP + +CD
Sbjct: 1610 NGVCINKNFFCDNNIDC-HDGSDERDCNNVVTPPAECRADEFTCR-DGTCIPQSAVCDRR 1667
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC +D ++ + C Q QCA + CI + C+ +DC+ D +DE+
Sbjct: 1668 PDCPHED------DEANCHKGCGRDQFQCA-NGDCIRADQQCNNFIDCA-----DGSDEN 1715
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D S C + C CV S C+G P+C + DE
Sbjct: 1716 CDHIVSLMPGSCPHGYVACTRDKDCVPQSSLCNGVPECRDRSDE 1759
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 98/231 (42%), Gaps = 41/231 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----------PFCNA---------- 203
C P + +C + N+C+ CDG+PDC + DE P +
Sbjct: 1466 CTPTQFKCVTGNKCIEGVYRCDGRPDCPDQSDEDCANETITHATPPISHVWPGETTERPR 1525
Query: 204 ECTPG-QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
EC P + C G+CI KCD DCL DGSDE + + C + +CA S +CI
Sbjct: 1526 ECDPSKEMRCKDGQCILLRRKCDNIFDCL-DGSDEHDCGV--CTPAEWKCA-SGECIAEI 1581
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD C+ D +DE +C NG+ C + CI N+ CD +DC
Sbjct: 1582 ERCDNVTHCA-----DGSDEIG---CECPNGERPCD-NGVCINKNFFCDNNIDCH----- 1627
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE C +E C C+ S CD +PDC + +DE
Sbjct: 1628 DGSDERDCNNVVTPPAECRADEFTC-RDGTCIPQSAVCDRRPDCPHEDDEA 1677
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 96/219 (43%), Gaps = 48/219 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSD 236
C++ S CDG +C EDE C ECTP QF C G KCI ++CDG DC D SD
Sbjct: 1440 CISKSAVCDGFDNCPRAEDE-LHCERECTPTQFKCVTGNKCIEGVYRCDGRPDC-PDQSD 1497
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNW---LCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
E C N + A I H W + +C D K +C +G
Sbjct: 1498 E------DCANETITHATPP--ISHVWPGETTERPREC-----------DPSKEMRCKDG 1538
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CI CD DC +D +DE H+ +C P E +C +S +C
Sbjct: 1539 Q--------CILLRRKCDNIFDC-----LDGSDE-------HDCGVCTPAEWKC-ASGEC 1577
Query: 354 VALSKFCDGKPDCSNGEDE-GPFC-NNKADCENLKCSHK 390
+A + CD C++G DE G C N + C+N C +K
Sbjct: 1578 IAEIERCDNVTHCADGSDEIGCECPNGERPCDNGVCINK 1616
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 96/203 (47%), Gaps = 21/203 (10%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
+RC ++ + + CDG DC +G+DE + C+PG+F+C + +CI +S +C+ D
Sbjct: 375 IRCRDGSRSICSVQQCDGVKDCDDGDDEDGCPHPGCSPGEFACDVSRCILDSQRCNFVQD 434
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ 289
C +DGSDE + C Q +C + +CI N C+ DC +D +DE +
Sbjct: 435 C-DDGSDEHDCNYPACTASQFKCG-NGQCIDGNDRCNNVEDC-----LDRSDE--LNCPR 485
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + +C L C+ CD DC D + C ++ RC
Sbjct: 486 CRSDEFEC-LDGNCVSQTSRCDGRSDC----------RDLSDEINCTVTTCSGDQFRC-L 533
Query: 350 SNQCVALSKFCDGKPDCSNGEDE 372
C+++ K C+ DC NGEDE
Sbjct: 534 DGTCISIDKRCNQNIDCRNGEDE 556
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%), Gaps = 13/135 (9%)
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
P H C + C+ + +CIP +++C+ +DC+ D +DE H C Q +C
Sbjct: 1863 PTNKPHACQYDEATCS-NGECIPKSYVCNGRLDCT-----DGSDEMRCSPHGCEPNQFRC 1916
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+ +C+ W CD + DC+ D +DE+ D + C E CGS +QC+ S
Sbjct: 1917 N-NTECVSKVWRCDGDKDCA-----DGSDEE-DCAPNAPGTPCRFTEFACGSHDQCIPKS 1969
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC +G DE
Sbjct: 1970 YHCDLERDCIDGSDE 1984
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 99/268 (36%), Gaps = 70/268 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCS--------NGEDEGPF--------CNAECTPG 208
C P++ C S C+A K+CDG DC NG G + N+ C
Sbjct: 1302 CDPDQFVC-SDGTCIAADKWCDGYSDCPDYGDEFDCNGNTNGDYENGVHETEENSACPMW 1360
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH---------------------QCFN 247
+F+C G CI + C+ DC EDG DE + + F
Sbjct: 1361 KFACD-GTCIDNIFVCNSVKDC-EDGLDEADCGMEGRNHNNPEEGARGDGFDETRLSVFA 1418
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCSTD---DIVDNTDEDWDKFH---QCFNGQVQCALSK 301
G L+ C ++ C++ S D DN D+ H +C Q +C
Sbjct: 1419 GGXPVDLA-PCPSMDFTCNDGSCISKSAVCDGFDNCPRAEDELHCERECTPTQFKCVTGN 1477
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDED----------------WDKYFSHNAVLCHPN-E 344
KCI + CD DC D +DED W + C P+ E
Sbjct: 1478 KCIEGVYRCDGRPDCP-----DQSDEDCANETITHATPPISHVWPGETTERPRECDPSKE 1532
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+RC QC+ L + CD DC +G DE
Sbjct: 1533 MRC-KDGQCILLRRKCDNIFDCLDGSDE 1559
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 98/260 (37%), Gaps = 47/260 (18%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD---------EPNTCIHQCFNGQV--- 250
A C P QF C G CI CDG+ DC + G + + +H+
Sbjct: 1300 ANCDPDQFVCSDGTCIAADKWCDGYSDCPDYGDEFDCNGNTNGDYENGVHETEENSACPM 1359
Query: 251 -QCALSKKCIPHNWLCD---------EEMDCSTDDIVDNTDED---WDKFHQ----CFNG 293
+ A CI + ++C+ +E DC + N E+ D F + F G
Sbjct: 1360 WKFACDGTCIDNIFVCNSVKDCEDGLDEADCGMEGRNHNNPEEGARGDGFDETRLSVFAG 1419
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTD---DIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
L+ C ++ C++ S D DN D+ H C P + +C +
Sbjct: 1420 GXPVDLA-PCPSMDFTCNDGSCISKSAVCDGFDNCPRAEDEL--HCERECTPTQFKCVTG 1476
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR---GAMCFCPAGQN 407
N+C+ CDG+PDC + DE DC N +H P G P +
Sbjct: 1477 NKCIEGVYRCDGRPDCPDQSDE--------DCANETITHATPPISHVWPGETTERPRECD 1528
Query: 408 PNK-TQCVDADECLIDGSCD 426
P+K +C D L+ CD
Sbjct: 1529 PSKEMRCKDGQCILLRRKCD 1548
>gi|297666129|ref|XP_002811402.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein [Pongo abelii]
Length = 4330
Score = 83.2 bits (204), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/137 (37%), Positives = 65/137 (47%), Gaps = 21/137 (15%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C S C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 208 GSVRPLPCGPQEATC-RSGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 264
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---------CFNGQVQCALSKKCIPHNWLC 265
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ C
Sbjct: 265 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVRXXXVCGPTQFRCVSTNMCIPASFHC 323
Query: 266 DEEMDCSTDDIVDNTDE 282
DEE DC D +DE
Sbjct: 324 DEESDCP-----DRSDE 335
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 69/227 (30%), Positives = 90/227 (39%), Gaps = 39/227 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C E C S N+CVAL CD +PDC + DE P T FS M + P
Sbjct: 129 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPT---FSLLM-ETTPL 184
Query: 221 SWKCDGFV----------DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+ + + L GS P C Q + C S CIP ++LCD + D
Sbjct: 185 PPRPETTIMRQPPVTHAPQPLLPGSVRPLPCGPQ----EATCR-SGHCIPRDYLCDGQED 239
Query: 271 CSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C D +DE D C + C + C W CD + DC D TDE
Sbjct: 240 CE-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEAN 288
Query: 330 DKYFSHNAV----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V +C P + RC S+N C+ S CD + DC + DE
Sbjct: 289 CPTKRPEEVRXXXVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 335
>gi|73954998|ref|XP_536545.2| PREDICTED: sortilin-related receptor [Canis lupus familiaris]
Length = 2204
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 1111 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYSCSSGMCIRSSWVCDGD 1170
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1171 NDC-RDWSDEANCTAIYHTCEVSNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1223
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D DE H LC +
Sbjct: 1224 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGADEQ------HCEPLCTRFMD 1270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1271 FVCKNRQQCLFHSMVCDGIVQCRDGSDE 1298
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCDG DC
Sbjct: 1327 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDGENDC-G 1385
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1386 DWSDEKDCGDLHILPSPTPGPSTCLPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1439
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ C + +C KKCIP+ CD DC D DE
Sbjct: 1440 EEACPSPANVTTASVPTHRGLCDRFEFECRQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1494
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1495 --NCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDE 1536
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 139/336 (41%), Gaps = 71/336 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS VL
Sbjct: 933 IERITFDGQRRS-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKFSGSQMVVL-- 987
Query: 167 PNEL------------RCGSSNQCVAL------------SKFC---DGKP---------- 189
+EL + SN CV SK C DG
Sbjct: 988 KSELTGLMDMKIFYKGKTTGSNACVPRPCSLLCLPKANNSKSCRCPDGVASSILPSGDLM 1047
Query: 190 -DCSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
+C G + E C E C Q+ C G CI W CD DC D SDE N
Sbjct: 1048 CECPRGYQQENHTCIKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTI 1106
Query: 245 C-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C + Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S C
Sbjct: 1107 CDLDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYSCS-SGMC 1160
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCD 361
I +W+CD + DC DW + A+ C + +C + C+ CD
Sbjct: 1161 IRSSWVCDGDNDC----------RDWSDEANCTAIYHTCEVSNFQC-HNGHCIPQRWACD 1209
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
G DC +G DE P N + C +C + C P+ +
Sbjct: 1210 GDMDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1244
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 126/316 (39%), Gaps = 69/316 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + DG ++
Sbjct: 888 LKPGIYRSNMDGSAVHRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFDGQRRSI 945
Query: 164 ----LCHPNELRC--------------------GSSNQCVALSK----------FCDGKP 189
L HP + S +Q V L F GK
Sbjct: 946 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKFSGSQMVVLKSELTGLMDMKIFYKGKT 1005
Query: 190 DCSNGEDEGPFCNAECTP---GQFSC----GMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
SN P C+ C P SC G+ I S D +C E +TCI
Sbjct: 1006 TGSNACVPRP-CSLLCLPKANNSKSCRCPDGVASSILPS--GDLMCECPRGYQQENHTCI 1062
Query: 243 HQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCA 298
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1063 KEENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQ 1116
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALS 357
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1117 ESGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYSC-SSGMCIRSS 1164
Query: 358 KFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1165 WVCDGDNDCRDWSDEA 1180
>gi|312374372|gb|EFR21940.1| hypothetical protein AND_16001 [Anopheles darlingi]
Length = 2316
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+ C + QCV CD DC +G DE A+C + +C G+CI +SW C
Sbjct: 1281 CPPHMFTCKTDRQCVPKYFVCDFDRDCHDGSDEQNCKTAQCKADEHACENGRCIKQSWVC 1340
Query: 225 DGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
DG DC DGSDE + +C + +C + C+P W CD E+DC+ D
Sbjct: 1341 DGEDDC-RDGSDEKECKKQNWPAVVECKADEFRCNATSTCLPKQWRCDTEVDCA-----D 1394
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDD----IVDNTDEDWDKY 332
+DE + C + + C + CI W CD E DC +D+ + + T +
Sbjct: 1395 GSDELNCTQNACESWKFMCVTDRMCIYKTWQCDGEPDCKDGSDEQNCPVTNATTPEIGTG 1454
Query: 333 FSHNAVL----------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+ CH +CG +++CV CDG DC + DE
Sbjct: 1455 GGGNSKKPGINFEPGQQCHDWMFKCG-NDRCVPYWWKCDGVNDCEDNSDE 1503
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 105/267 (39%), Gaps = 73/267 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------FCNAECTPGQFSC-GMGKC 217
C +E C + +C+ S CDG+ DC +G DE EC +F C C
Sbjct: 1321 CKADEHAC-ENGRCIKQSWVCDGEDDCRDGSDEKECKKQNWPAVVECKADEFRCNATSTC 1379
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+P+ W+CD VDC DGSDE N + C + + C + CI W CD E DC
Sbjct: 1380 LPKQWRCDTEVDC-ADGSDELNCTQNACESWKFMCVTDRMCIYKTWQCDGEPDCK----- 1433
Query: 278 DNTDE--------------------------DWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
D +DE +++ QC + +C + +C+P+ W CD
Sbjct: 1434 DGSDEQNCPVTNATTPEIGTGGGGNSKKPGINFEPGQQCHDWMFKCG-NDRCVPYWWKCD 1492
Query: 312 EEMDCSTDDIVDNTDEDWDKYFSHNAV--------------------------LCHPNEL 345
DC DN+DE + +C +E
Sbjct: 1493 GVNDCE-----DNSDEQGCGEKGGSGGAGTSSTTETSTIVPSRPGSPTRRKDRMCGQHEF 1547
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE 372
RC S C++ CDG+ DC +GEDE
Sbjct: 1548 RC-DSGVCISKRDVCDGRKDCPSGEDE 1573
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 103/265 (38%), Gaps = 65/265 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECT---------------- 206
C + C + C+ + CDG+PDC +G DE P NA
Sbjct: 1406 CESWKFMCVTDRMCIYKTWQCDGEPDCKDGSDEQNCPVTNATTPEIGTGGGGNSKKPGIN 1465
Query: 207 --PGQ------FSCGMGKCIPESWKCDGFVDCLEDGSDE------------------PNT 240
PGQ F CG +C+P WKCDG DC ED SDE +
Sbjct: 1466 FEPGQQCHDWMFKCGNDRCVPYWWKCDGVNDC-EDNSDEQGCGEKGGSGGAGTSSTTETS 1524
Query: 241 CIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN-----TDEDWD---KFHQCFN 292
I G + C H + CD + S D+ D + ED D C N
Sbjct: 1525 TIVPSRPGSPTRRKDRMCGQHEFRCDSGVCISKRDVCDGRKDCPSGEDEDNCPTKKLCGN 1584
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KYFSHNAVL----CHPNELRC 347
+C + C+P + LC+ DC D +DE+ + K N+ + +P C
Sbjct: 1585 SNFRCRVDGACLPMDKLCNGIKDCP-----DGSDEECNFKPIIMNSTVNNCSAYPGVFEC 1639
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
N C AL+ CDGKP C +G DE
Sbjct: 1640 --DNTCFALTMLCDGKPSCYDGTDE 1662
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 109/284 (38%), Gaps = 62/284 (21%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPE 220
V C +E RC +++ C+ CD + DC++G DE C +F C + CI +
Sbjct: 1363 VVECKADEFRCNATSTCLPKQWRCDTEVDCADGSDELNCTQNACESWKFMCVTDRMCIYK 1422
Query: 221 SWKCDGFVDCLEDGSDEPNTCI--------------------------HQCFNGQVQCAL 254
+W+CDG DC +DGSDE N + QC + +C
Sbjct: 1423 TWQCDGEPDC-KDGSDEQNCPVTNATTPEIGTGGGGNSKKPGINFEPGQQCHDWMFKCG- 1480
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN------------------GQVQ 296
+ +C+P+ W CD DC DN+DE G
Sbjct: 1481 NDRCVPYWWKCDGVNDCE-----DNSDEQGCGEKGGSGGAGTSSTTETSTIVPSRPGSPT 1535
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDN-----TDEDWDKYFSHNAVLCHPNELRCGSSN 351
+ C H + CD + S D+ D + ED D + LC + RC
Sbjct: 1536 RRKDRMCGQHEFRCDSGVCISKRDVCDGRKDCPSGEDEDNCPTKK--LCGNSNFRCRVDG 1593
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C+ + K C+G DC +G DE CN K N + CS P
Sbjct: 1594 ACLPMDKLCNGIKDCPDGSDEE--CNFKPIIMN-STVNNCSAYP 1634
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNW 263
C P F C C+P +++CDG DC + +E C C ++C+P +
Sbjct: 1240 CGPKFFDCKNQMCVPLTYRCDGDDDCTDGSDEEGCPAGKPPCPPHMFTCKTDRQCVPKYF 1299
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+CD + DC D +DE K QC + C + +CI +W+CD E DC D
Sbjct: 1300 VCDFDRDCH-----DGSDEQNCKTAQCKADEHACE-NGRCIKQSWVCDGEDDCR-----D 1348
Query: 324 NTDEDWDKYFSHNAVL-CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DE K + AV+ C +E RC +++ C+ CD + DC++G DE
Sbjct: 1349 GSDEKECKKQNWPAVVECKADEFRCNATSTCLPKQWRCDTEVDCADGSDE 1398
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGM-GKCIPE 220
+C +E RC S C++ CDG+ DC +GEDE P C F C + G C+P
Sbjct: 1541 MCGQHEFRC-DSGVCISKRDVCDGRKDCPSGEDEDNCP-TKKLCGNSNFRCRVDGACLPM 1598
Query: 221 SWKCDGFVDCLEDGSDEP--------NTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
C+G DC DGSDE N+ ++ C + G +C C LCD +
Sbjct: 1599 DKLCNGIKDC-PDGSDEECNFKPIIMNSTVNNCSAYPGVFEC--DNTCFALTMLCDGKPS 1655
Query: 271 CSTDDIVDNTDED 283
C D TDE+
Sbjct: 1656 C-----YDGTDEE 1663
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 108 LEKAGMHGENRSPLVTK-NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+ ++ M G + L TK ++ WP+ + IDY + LYW D+ + + S +DG + +
Sbjct: 1059 ISRSNMDGTDVRELFTKPDVAWPNGVTIDYMAERLYWVDASKDYIASSDLDGKNLHKVLQ 1118
Query: 167 PNE 169
NE
Sbjct: 1119 QNE 1121
>gi|380797163|gb|AFE70457.1| sortilin-related receptor preproprotein, partial [Macaca mulatta]
Length = 2156
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1063 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1122
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1123 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1175
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1176 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1222
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1223 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1250
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1020 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1075
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1076 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1128
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1129 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1174
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1175 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1222
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L H
Sbjct: 885 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAH 941
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKP------------------------D 190
+ + SN CV S C K D
Sbjct: 942 QLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLMCD 1001
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1002 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1060
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1061 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1114
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1115 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1163
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1164 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1196
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1279 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGD 1338
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ + +C+ S C+ W+CD DC+ D
Sbjct: 1339 WTDEKDCGDSHILPFSTPAPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA-----D 1388
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1389 GSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DGR 1443
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1444 DEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1488
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1209 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1268
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1269 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1326
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1327 RWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1385
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1386 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1440
Query: 368 NGEDEG 373
+G DE
Sbjct: 1441 DGRDEA 1446
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 840 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 897
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS + +A + F GK
Sbjct: 898 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 957
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 958 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 1015
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1016 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQE 1069
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1070 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 1117
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1118 VCDGDNDCRDWSDEA 1132
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1315 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCSSGTC 1373
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1374 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1432
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1433 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1483
>gi|301756562|ref|XP_002914137.1| PREDICTED: sortilin-related receptor-like [Ailuropoda melanoleuca]
Length = 2198
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C ++SC G CI SW CDG
Sbjct: 1105 TQFRCQESGTCIPLSYKCDLEDDCGDNSDETHCEMHQCRSDEYSCSSGMCIRSSWVCDGD 1164
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1165 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1217
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D DE H LC +
Sbjct: 1218 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGADEQ------HCEPLCTRFMD 1264
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1265 FVCKNHQQCLFHSMVCDGIVQCRDGSDE 1292
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 92/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1321 CISLIWKCDGMDDCGDYSDEASCENPTEAPNCSHYFQFQCDNGHCIPNRWKCDRENDC-G 1379
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1380 DWSDERDCGDSHILPSPTPGPSTCLPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1433
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ +C + +C KKCIP+ CD DC D DE
Sbjct: 1434 EEACPSPANVTTASVPTHHGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1488
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1489 --NCPTHSTLTCMSTEFKCEDGEACIVLSERCDGFLDCSDESDE 1530
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 139/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS AVL
Sbjct: 927 IERITFDGQQRS-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKHSGSQMAVLAS 983
Query: 167 P----------NELRCGSSNQCVAL------------SKFC---DGKP-----------D 190
+ + SN CV+ S+ C DG +
Sbjct: 984 QLTGLMDMKIFYKGKTMGSNACVSRPCSLLCLPRANNSRSCRCPDGVASSVLPSGDLMCE 1043
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + E C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1044 CPQGYQRENNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTVCD 1102
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1103 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDETHCEMHQCRSDEYSCS-SGMCIR 1156
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1157 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1205
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1206 MDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1238
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 129/316 (40%), Gaps = 69/316 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + DG ++
Sbjct: 882 LKPGIYRSNMDGTAVHCLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFDGQQRSI 939
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS +A + F GK
Sbjct: 940 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKHSGSQMAVLASQLTGLMDMKIFYKGKT 999
Query: 190 DCSNGEDEGPFCNAECTP---GQFSC----GMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242
SN P C+ C P SC G+ + S D +C + E NTC+
Sbjct: 1000 MGSNACVSRP-CSLLCLPRANNSRSCRCPDGVASSVLPS--GDLMCECPQGYQRENNTCV 1056
Query: 243 HQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCA 298
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1057 KEENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTVCDLDTQFRCQ 1110
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALS 357
S CIP ++ CD E DC DN+DE +H C +E C SS C+ S
Sbjct: 1111 ESGTCIPLSYKCDLEDDCG-----DNSDE------THCEMHQCRSDEYSC-SSGMCIRSS 1158
Query: 358 KFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1159 WVCDGDNDCRDWSDEA 1174
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 69/170 (40%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P + C G C+ +SW
Sbjct: 1365 CIPNRWKCDRENDCGDWSDERDCGDSHILPSPTPGP---STCLPNYYRCSSGACVMDSWV 1421
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T +C + +C KKCIP+ CD D
Sbjct: 1422 CDGYRDC-ADGSDEEACPSPANVTTASVPTHHGRCDRFEFECHQPKKCIPNWKRCDGHQD 1480
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1481 CQ-----DGQDEANCPTHSTLTCMSTEFKCEDGEACIVLSERCDGFLDCS 1525
>gi|297269425|ref|XP_001102178.2| PREDICTED: sortilin-related receptor-like [Macaca mulatta]
Length = 2086
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 993 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1052
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1053 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1105
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1106 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDE------QHCEPLCTHFMD 1152
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1153 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1180
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 950 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1008
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1009 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 1061
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 1062 ANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 1107
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1108 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1152
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L H
Sbjct: 815 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAH 871
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKP------------------------D 190
+ + SN CV S C K D
Sbjct: 872 QLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLMCD 931
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 932 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 990
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 991 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1044
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1045 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1093
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1094 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1126
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1209 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGD 1268
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ + +C+ S C+ W+CD DC+ D
Sbjct: 1269 WTDEKDCGDSHILPFSTPAPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA-----D 1318
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1319 GSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DGR 1373
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1374 DEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1418
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1139 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1198
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1199 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1256
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1257 RWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1315
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1316 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1370
Query: 368 NGEDEG 373
+G DE
Sbjct: 1371 DGRDEA 1376
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 770 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 827
Query: 164 LC----HP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
+ HP NE+ GS + +A + F GK
Sbjct: 828 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 887
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 888 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 945
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 946 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQE 999
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1000 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 1047
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1048 VCDGDNDCRDWSDEA 1062
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1245 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCSSGTC 1303
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1304 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1362
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1363 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1413
>gi|332838038|ref|XP_003313440.1| PREDICTED: LOW QUALITY PROTEIN: sortilin-related receptor [Pan
troglodytes]
Length = 2212
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1119 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1178
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1179 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1231
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1232 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1278
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1279 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1306
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1076 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1131
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1132 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1184
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1185 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1230
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1231 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1278
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1335 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1393
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1394 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1443
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1444 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DG 1498
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1499 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1544
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1076 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1134
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1135 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1181
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1182 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1236
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1237 CNGFRCPNGTCIPSSK 1252
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1265 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1324
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1325 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1382
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1383 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1441
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1442 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ 1496
Query: 368 NGEDEG 373
+G DE
Sbjct: 1497 DGRDEA 1502
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1371 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1429
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1430 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1488
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1489 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1539
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 60/291 (20%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 896 LKPGIYRSNMDGSAAYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 953
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S E Q +
Sbjct: 954 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQ---------MEILANQLTG 1001
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQC----ALSKKCIPHNWLC 265
M I K G C+ P C C N C +S +P
Sbjct: 1002 LMDMKIFYKGKNTGSNACV------PRPCSLLCLPKANNSRSCRCPEGVSSSVLPSG--- 1052
Query: 266 DEEMDCSTDDIVDN---TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D DC + N E+ + C Q +C+ + CI W CD + DC
Sbjct: 1053 DLMCDCPQGYQLKNNTCVKEE----NTCLRNQYRCS-NGNCINSIWWCDFDNDCG----- 1102
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1103 DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1148
>gi|441645106|ref|XP_004090636.1| PREDICTED: LOW QUALITY PROTEIN: sortilin-related receptor [Nomascus
leucogenys]
Length = 2248
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1155 TQFRCHESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1214
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1215 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1267
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1268 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1314
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1315 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1342
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ C + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1112 CLRNQYHCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCHESGTCIP 1167
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1168 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1220
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1221 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1266
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1267 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1314
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1371 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1429
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1430 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1479
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1480 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DG 1534
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1535 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 138/336 (41%), Gaps = 71/336 (21%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L
Sbjct: 977 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQVEILA- 1032
Query: 167 PNEL------------RCGSSNQCVAL--SKFCDGKP----------------------- 189
N+L + SN CV+ S C K
Sbjct: 1033 -NQLTGLMDMKIFYKGKNTGSNACVSRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLM 1091
Query: 190 -DCSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DC G + + C E C Q+ C G CI W CD DC D SDE N
Sbjct: 1092 CDCPQGYQLKNNTCVKEENTCLRNQYHCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTI 1150
Query: 245 C-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C + Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S C
Sbjct: 1151 CDLDTQFRCHESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMC 1204
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCD 361
I +W+CD + DC DW + A+ C + +C + C+ CD
Sbjct: 1205 IRSSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACD 1253
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
G DC +G DE P N + C +C + C P+ +
Sbjct: 1254 GDTDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1288
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1301 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1360
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1361 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1418
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1419 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1477
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1478 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1532
Query: 368 NGEDEG 373
+G DE
Sbjct: 1533 DGRDEA 1538
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1407 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1465
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1466 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1524
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1525 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1575
>gi|355752725|gb|EHH56845.1| hypothetical protein EGM_06329 [Macaca fascicularis]
Length = 2171
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1059 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1118
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1119 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1171
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1172 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1218
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1219 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1246
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 103/223 (46%), Gaps = 32/223 (14%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESWKCD 225
++ RC + N C+ +CD DC + DE C QF C G CIP S+KCD
Sbjct: 1019 SKYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCD 1077
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-- 283
DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1078 LEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDEANC 1130
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP- 342
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 1131 TAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNCEKK 1176
Query: 343 -NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1177 CNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1218
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1275 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGD 1334
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ + +C+ S C+ W+CD DC+ D
Sbjct: 1335 WTDEKDCGDSHILPFSTPAPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA-----D 1384
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1385 GSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DGR 1439
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1440 DEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1484
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1205 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1264
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1265 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1322
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1323 RWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1381
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1382 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1436
Query: 368 NGEDEG 373
+G DE
Sbjct: 1437 DGRDEA 1442
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 23/192 (11%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDE 267
++ C G CI W CD DC D SDE N C + Q +C S CIP ++ CD
Sbjct: 1020 KYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSYKCDL 1078
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1079 EDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC----------R 1122
Query: 328 DWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
DW + A+ C + +C + C+ CDG DC +G DE P N + C
Sbjct: 1123 DWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKKCNGF 1180
Query: 386 KCSH-KCSPTPR 396
+C + C P+ +
Sbjct: 1181 RCPNGTCIPSSK 1192
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1311 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCSSGTC 1369
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1370 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1428
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1429 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1479
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 113/311 (36%), Gaps = 88/311 (28%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 824 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 881
Query: 164 LC----HP-------NELR---------------CGSSNQCVA--------LSKFCDGKP 189
+ HP NE+ GS + +A + F GK
Sbjct: 882 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 941
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 942 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 999
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKK 302
+ G C L+ W K ++C NG
Sbjct: 1000 EGVGGIALCFLTFSGY------------------------WKKSKYRCSNGN-------- 1027
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCD 361
CI W CD + DC D +DE + +C + + RC S C+ LS CD
Sbjct: 1028 CINSIWWCDFDNDCG-----DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCD 1077
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 1078 LEDDCGDNSDE 1088
>gi|4507157|ref|NP_003096.1| sortilin-related receptor preproprotein [Homo sapiens]
gi|1552324|emb|CAA69325.1| mosaic protein LR11 [Homo sapiens]
gi|5030424|gb|AAC50891.2| gp250 precursor [Homo sapiens]
gi|119587929|gb|EAW67525.1| sortilin-related receptor, L(DLR class) A repeats-containing, isoform
CRA_b [Homo sapiens]
gi|119587930|gb|EAW67526.1| sortilin-related receptor, L(DLR class) A repeats-containing, isoform
CRA_b [Homo sapiens]
gi|119587931|gb|EAW67527.1| sortilin-related receptor, L(DLR class) A repeats-containing, isoform
CRA_b [Homo sapiens]
gi|187953471|gb|AAI37172.1| Sortilin-related receptor, L(DLR class) A repeats-containing [Homo
sapiens]
gi|208965552|dbj|BAG72790.1| sortilin-related receptor [synthetic construct]
Length = 2214
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C K CIP+ CD DC D
Sbjct: 1446 DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1137 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1183
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1184 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1238
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1239 CNGFRCPNGTCIPSSK 1254
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C K CIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
>gi|383421007|gb|AFH33717.1| sortilin-related receptor preproprotein [Macaca mulatta]
Length = 2214
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L H
Sbjct: 943 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAH 999
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKP------------------------D 190
+ + SN CV S C K D
Sbjct: 1000 QLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLMCD 1059
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1060 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1118
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1119 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1172
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1173 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1221
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1222 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1254
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 94/227 (41%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDCGD 1396
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ + +C+ S C+ W+CD DC+ D
Sbjct: 1397 WTDEKDCGDSHILPFSTPAPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA-----D 1446
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1447 GSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DGR 1501
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1502 DEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 955
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS + +A + F GK
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 1015
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 1016 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 1073
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1074 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQE 1127
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1128 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 1175
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1176 VCDGDNDCRDWSDEA 1190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPAPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
>gi|296452912|sp|Q92673.2|SORL_HUMAN RecName: Full=Sortilin-related receptor; AltName: Full=Low-density
lipoprotein receptor relative with 11 ligand-binding
repeats; Short=LDLR relative with 11 ligand-binding
repeats; Short=LR11; AltName: Full=SorLA-1; AltName:
Full=Sorting protein-related receptor containing LDLR
class A repeats; Short=SorLA; Flags: Precursor
Length = 2214
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C K CIP+ CD DC D
Sbjct: 1446 DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1137 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1183
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1184 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1238
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1239 CNGFRCPNGTCIPSSK 1254
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C K CIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
>gi|402895573|ref|XP_003910898.1| PREDICTED: sortilin-related receptor [Papio anubis]
Length = 2214
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC + N C+ +CD DC + DE C QF C G CIP S+
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1137 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 1189
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 1190 ANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 1235
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1236 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L H
Sbjct: 943 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAH 999
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKP------------------------D 190
+ + SN CV S C K D
Sbjct: 1000 QLTGLMDMKIFYKGKNTGSNACVPRPCSLLCLPKANNSRSCRCPEGVSSSVLPSGDLMCD 1059
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1060 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1118
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1119 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1172
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1173 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1221
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1222 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1254
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D +DE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWTDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1446 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWTDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 128/315 (40%), Gaps = 67/315 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++LN +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLNCIERITFSGQQRSV 955
Query: 164 ----LCHP-------NEL---------------RCGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS + +A + F GK
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYSGSQMEILAHQLTGLMDMKIFYKGKN 1015
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + NTC+
Sbjct: 1016 TGSNACVPRP-CSLLCLPKANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNNTCVK 1073
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCAL 299
+ C Q +C+ + CI W CD + DC D +DE C + Q +C
Sbjct: 1074 EENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMSDERNCPTTICDLDTQFRCQE 1127
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSK 358
S CIP ++ CD E DC DN+DE SH C +E C SS C+ S
Sbjct: 1128 SGTCIPLSYKCDLEDDCG-----DNSDE------SHCEMHQCRSDEYNC-SSGMCIRSSW 1175
Query: 359 FCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 1176 VCDGDNDCRDWSDEA 1190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWTDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
>gi|449489234|ref|XP_002191173.2| PREDICTED: sortilin-related receptor [Taeniopygia guttata]
Length = 1598
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +FSC G CI SW CDG
Sbjct: 1017 TQFRCQGSGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRNDEFSCSSGMCIRLSWMCDGD 1076
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1077 NDC-RDWSDEANCTAVYHTCEASSFQCH-NGHCIPQRWACDGDADCQ-----DGSDEDPA 1129
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG QC + CIP + CD DCS D +DE H LC +
Sbjct: 1130 SCEKKCNG-FQCP-NGTCIPTSKHCDGVNDCS-----DASDE------RHCEPLCTRYMD 1176
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1177 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1204
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 136/343 (39%), Gaps = 81/343 (23%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+R+E+ +G RS ++ ++ P ++ + N+ +YW D S L+ + + GS +L
Sbjct: 837 DRIERVDFNGMQRS-VILDSLPHPYAIAVFKNE--IYWNDWSQLSIFRASKTSGSRMEIL 893
Query: 165 CHPNELRCGSSNQCVALSKFCDGK-----------------PDCSNGED----EG----- 198
G N + + F GK P +NG EG
Sbjct: 894 V-------GRLNGIMDMKIFYRGKTTGQNACITKPCSLLCLPRSNNGRSCKCPEGVASTV 946
Query: 199 ----------PFCNA-----------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
P A C P Q+ C G CI W+CD DC D SDE
Sbjct: 947 LPSGELRCDCPHGYAMKNNTCIKEENTCLPNQYRCSNGNCINSIWQCDNDNDC-GDMSDE 1005
Query: 238 PNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
N C Q +C S CIP ++ CD E DC DN+DE + HQC N +
Sbjct: 1006 RNCPTTVCDTETQFRCQGSGTCIPLSYKCDLEDDCG-----DNSDESHCEAHQCRNDEFS 1060
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCV 354
C+ S CI +W+CD + DC DW + AV C + +C + C+
Sbjct: 1061 CS-SGMCIRLSWMCDGDNDC----------RDWSDEANCTAVYHTCEASSFQC-HNGHCI 1108
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
CDG DC +G DE P K C +C + C PT +
Sbjct: 1109 PQRWACDGDADCQDGSDEDPASCEKK-CNGFQCPNGTCIPTSK 1150
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/276 (33%), Positives = 123/276 (44%), Gaps = 43/276 (15%)
Query: 157 DGSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA---ECTPGQFSC 212
D SH A C +E C SS C+ LS CDG DC + DE C A C F C
Sbjct: 1045 DESHCEAHQCRNDEFSC-SSGMCIRLSWMCDGDNDCRDWSDEAN-CTAVYHTCEASSFQC 1102
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G CIP+ W CDG DC +DGSDE P +C +C NG QC + CIP + CD DC
Sbjct: 1103 HNGHCIPQRWACDGDADC-QDGSDEDPASCEKKC-NG-FQCP-NGTCIPTSKHCDGVNDC 1158
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--- 328
S D +DE + C ++C+ H+ +CD + C D +DED
Sbjct: 1159 S-----DASDERHCEPLCTRYMDFVCKNRQQCLFHSMVCDGIIQCR-----DGSDEDAGY 1208
Query: 329 ----WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
D F C +C + C++L CDG DC + DE A+CEN
Sbjct: 1209 AGCSQDPEFHRT---CDQFSFQC-QNGVCISLVWKCDGMDDCGDYSDE-------ANCEN 1257
Query: 385 LKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADEC 419
+ CS R C G PN+ +C + ++C
Sbjct: 1258 PTEAPNCS---RYYQFQCGNGHCIPNRWKCDEENDC 1290
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF CG G CIP WKCD DC
Sbjct: 1233 CISLVWKCDGMDDCGDYSDEANCENPTEAPNCSRYYQFQCGNGHCIPNRWKCDEENDC-G 1291
Query: 233 DGSDE 237
D SDE
Sbjct: 1292 DWSDE 1296
>gi|260795494|ref|XP_002592740.1| hypothetical protein BRAFLDRAFT_67180 [Branchiostoma floridae]
gi|229277963|gb|EEN48751.1| hypothetical protein BRAFLDRAFT_67180 [Branchiostoma floridae]
Length = 1498
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 99/216 (45%), Gaps = 27/216 (12%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKC 224
+P E RC +S +CV C+G DCS+G DE EC P F C G C+ C
Sbjct: 159 NPGEFRCETSRRCVYEYYICNGDADCSDGSDEKDCLRKECPIPEDFKCRSGTCVRAPEVC 218
Query: 225 DGFVDCLEDGSDEPNTCIHQC--FNGQ---VQCALSKKCIPHNWLCDEEMDC--STDDIV 277
+G DC DGSDE +C F+ +C C+P +CD DC S+D+
Sbjct: 219 NGVADCA-DGSDEEECSKRECPQFSSTDELFRCERGGACVPVLDMCDGVNDCADSSDESC 277
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-WDKYFSHN 336
N + + F C +G+ K C+P CD DC D +DE W N
Sbjct: 278 WNDECPYPDFFTCESGE------KTCVPPIKQCDHFNDCQ-----DGSDEQCW------N 320
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
V + N+ RC + C+ + CDG PDC++G DE
Sbjct: 321 VVCRYRNDSRCQNDGVCIDQEQHCDGHPDCTDGSDE 356
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
N V + N+ RC + C+ + CDG PDC++G DE C P F C G CI
Sbjct: 320 NVVCRYRNDSRCQNDGVCIDQEQHCDGHPDCTDGSDED--CTVCPYPDDFRCQTGTCIRS 377
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG +CL DGSDE + C + C S+KC+ CD +DC D + D +
Sbjct: 378 VSHCDGHENCL-DGSDEEDCWKKDCQSDSFNCKTSEKCVFGWDRCDGVVDCHHDGVRDES 436
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE C + +C+ +CD DC D++DE +LC
Sbjct: 437 DE-----SGCVCTSDKFLCENRCVAPVGVCDGVPDCD-----DSSDE----------LLC 476
Query: 341 HP-NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P N L+ C+ + CDG DC+NGEDE
Sbjct: 477 PPCNGLQVECDGGCLPKYRACDGLEDCANGEDE 509
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 120/273 (43%), Gaps = 32/273 (11%)
Query: 140 ILYWCDSHLNTVESVRVDGSHNAVLCHPNE---LRCGSSNQCVALSKFCDGKPDCSNGED 196
+L+ C L VE V + + +V C E RC SS CV + CDG+ +C +G D
Sbjct: 6 LLFVC---LMLVEYVSLQTTEGSVECTSFESDLFRCKSSGTCVLPQEVCDGRNNCEDGSD 62
Query: 197 EGPFCNAECTPGQ-----FSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFN-GQ 249
E + EC F C G C+ E C+G DC DGSDE N +C +
Sbjct: 63 ELDCWSKECPLSSPFDVPFRCESSGACVGEWETCNGIYDC-RDGSDERNCSARECPDPND 121
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN-GQVQCALSKKCIPHNW 308
+C S C+ C+ DCS D +DE C N G+ +C S++C+ +
Sbjct: 122 FRCESSGACVREWEKCNGIDDCS-----DGSDERDCSDGGCPNPGEFRCETSRRCVYEYY 176
Query: 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+C+ + DCS D +DE D + P + +C S CV + C+G DC++
Sbjct: 177 ICNGDADCS-----DGSDEK-DCLRKECPI---PEDFKC-RSGTCVRAPEVCNGVADCAD 226
Query: 369 GEDEGPFCNNKADCENLKCSHKCSPTPRGAMCF 401
G DE +K +C + + RG C
Sbjct: 227 GSDEEEC--SKRECPQFSSTDELFRCERGGACV 257
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 86/213 (40%), Gaps = 47/213 (22%)
Query: 185 CDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE----- 237
CDG DCS G DE C EC Q + C+P SW CD DCL DG DE
Sbjct: 911 CDGVEDCSTGRDEENCDDCGMEC---QTTLDSASCVPSSWICDEIEDCL-DGEDEQGCVQ 966
Query: 238 --PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ- 294
P C C N C+P L D DC D DE G+
Sbjct: 967 GVPKHCFFTCRN-------DVTCLPTRLLGDGNQDCP-----DGEDERRSYVEDAMGGRW 1014
Query: 295 VQCAL-------SKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAVLC 340
C+ + C+P + CD + DC S +DI + D + LC
Sbjct: 1015 GSCSFNCSSVYGNASCVPDAFACDGDADCLGEEDEQSCEDIAPGDEGVPDVCLT---FLC 1071
Query: 341 HPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDE 372
+ + G+++Q CV CDG P+C++GEDE
Sbjct: 1072 N---MPGGATDQICVPPHWVCDGYPNCASGEDE 1101
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 157 DGSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
D S + +LC P N L+ C+ + CDG DC+NGEDE C QF C G
Sbjct: 468 DDSSDELLCPPCNGLQVECDGGCLPKYRACDGLEDCANGEDEINCTVGGCGSKQFPCADG 527
Query: 216 KCIPESWKCDGFVDCLEDGSDE 237
C+ ES CD DC G DE
Sbjct: 528 TCLLESQLCDNRTDC-SGGEDE 548
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-----FSC----GMGKCIPE 220
C + C+ DG DC +GEDE + G+ F+C G C+P+
Sbjct: 974 FTCRNDVTCLPTRLLGDGNQDCPDGEDERRSYVEDAMGGRWGSCSFNCSSVYGNASCVPD 1033
Query: 221 SWKCDGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
++ CDG DCL + ++ P+ C+ N A + C+P +W+CD
Sbjct: 1034 AFACDGDADCLGEEDEQSCEDIAPGDEGVPDVCLTFLCN-MPGGATDQICVPPHWVCDGY 1092
Query: 269 MDCST 273
+C++
Sbjct: 1093 PNCAS 1097
>gi|296216435|ref|XP_002754562.1| PREDICTED: sortilin-related receptor [Callithrix jacchus]
Length = 2214
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDENHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDENHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1446 DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 90/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE+ + HQC + + C+ S CI +W+CD + DC
Sbjct: 1137 KCDLEDDCG-----DNSDENHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1183
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1184 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1238
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1239 CNGFRCPNGTCIPSSK 1254
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 98/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDATFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C +C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHRDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 74/176 (42%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C KKCIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPSLANVTAASTPTQLGRCDRFEFECHQPKKCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + +C + CI + CD +DCS
Sbjct: 1491 CDGHRDCQ-----DGRDEANCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCS 1541
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 111/288 (38%), Gaps = 54/288 (18%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAVYRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 955
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S E Q +
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQ---------MEILANQLTG 1003
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQC----ALSKKCIPHNWLC 265
M I K G C+ P C C N C +S +P
Sbjct: 1004 LMDMKIFYKGKNTGSNACV------PRPCSLLCLPKANNSRSCRCPEGVSSSLLPSG--- 1054
Query: 266 DEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
D DC + N + + + + C Q +C+ + CI W CD + DC D +
Sbjct: 1055 DLMCDCPQGYQLQN-NTCFKEENTCLRNQYRCS-NGNCINSIWWCDFDNDCG-----DMS 1107
Query: 326 DEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1108 DER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1150
>gi|260834011|ref|XP_002612005.1| hypothetical protein BRAFLDRAFT_86964 [Branchiostoma floridae]
gi|229297378|gb|EEN68014.1| hypothetical protein BRAFLDRAFT_86964 [Branchiostoma floridae]
Length = 1277
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 100/225 (44%), Gaps = 36/225 (16%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPESW 222
P++++CG+++ C+ S CD DC +G DE P C F CG G CI
Sbjct: 109 PDDIKCGTTSVCIRTSYGCDNYIDCPDGSDEVDCQDPGCGT-----NFECGTGDCIDSRL 163
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQC--ALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+CDGFVDC DGS+E + C G ++C L CI H+ L C D + +
Sbjct: 164 QCDGFVDC-PDGSEEQDCTFPTCPLGMIECEDGLPFPCI-HDALMST---CGITDCHEAS 218
Query: 281 DE-------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DE WD F +C + +C S C+P + +CD DC DN+DE
Sbjct: 219 DETAMNCISAHSHVRGWD-FRECLPQEFECEASSICVPLSRVCDSINDCG-----DNSDE 272
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+N + C C S CV + CDG DC + DE
Sbjct: 273 GCGGRKHYNMLECVFGGFVC-HSGMCVPTDRRCDGVEDCDDATDE 316
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 117/287 (40%), Gaps = 63/287 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC---GMGKCIP 219
V C + +C +++ CV + CDG DC +G DE C A PG C + CIP
Sbjct: 26 VECSSSTFKCTTTDTCVPSAYTCDGLRDCPDGSDEN--CTACPLPGFIKCVSHDVDSCIP 83
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------- 271
++CDGF C DG+DE N C F ++C + CI ++ CD +DC
Sbjct: 84 PGYQCDGFSHC-SDGTDE-NDCSVCPFPDDIKCGTTSVCIRTSYGCDNYIDCPDGSDEVD 141
Query: 272 ------------STDDIVDN-------------TDEDWDKFHQCFNGQVQC--ALSKKCI 304
T D +D+ ++E F C G ++C L CI
Sbjct: 142 CQDPGCGTNFECGTGDCIDSRLQCDGFVDCPDGSEEQDCTFPTCPLGMIECEDGLPFPCI 201
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-------CHPNELRCGSSNQCVALS 357
H+ L C D + +DE S ++ + C P E C +S+ CV LS
Sbjct: 202 -HDALMST---CGITDCHEASDETAMNCISAHSHVRGWDFRECLPQEFECEASSICVPLS 257
Query: 358 KFCDGKPDCSNGEDEGPFCNNKADCENLKC--------SHKCSPTPR 396
+ CD DC + DEG C + L+C S C PT R
Sbjct: 258 RVCDSINDCGDNSDEG--CGGRKHYNMLECVFGGFVCHSGMCVPTDR 302
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 72/160 (45%), Gaps = 22/160 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNAECTPGQFSCGMGKCIP 219
C P E C +S+ CV LS+ CD DC + DEG + EC G F C G C+P
Sbjct: 240 CLPQEFECEASSICVPLSRVCDSINDCGDNSDEGCGGRKHYNMLECVFGGFVCHSGMCVP 299
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+CDG DC +D +DE C +C S +CI + +CD + DCS+
Sbjct: 300 TDRRCDGVEDC-DDATDESG--CESCAYKGWECG-SGECIDPSAVCDGDKDCSS-----G 350
Query: 280 TDEDWDKFHQCFNGQVQCAL---SKKCIPHNWLCDEEMDC 316
DED C+N + +P++ CD DC
Sbjct: 351 ADED-----NCYNATTAFQPFECGGRSVPYSRFCDGRSDC 385
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
++C ++ C C++L+ CD K DCS GEDE C C Q C +C+P+
Sbjct: 502 IVCDEDQFYC-LDGTCLSLALHCDSKTDCSGGEDE-ERCAGICNSLQLECD-SRCLPKYR 558
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CDGF DC DG DE N C + Q C+ C+ + LCD + DCS
Sbjct: 559 ACDGFQDC-SDGRDEENCVTSGCASKQFLCS-DGTCLMESQLCDRQTDCS 606
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 89/216 (41%), Gaps = 33/216 (15%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
S++ S+ CDG+ DCS G DE C EC G CIP W CDG DCL
Sbjct: 957 SSEVFHDSQACDGRVDCSTGTDEDSCDGCAMECLTGL----EDPCIPPGWVCDGITDCL- 1011
Query: 233 DGSDEPNTCIHQCFNGQVQ-----CALSKKCIPHNWLCDEEMDCST--DDIVDNTDEDW- 284
DG DE H+C G + C + C+P L D DC++ D+ ++ +E
Sbjct: 1012 DGKDE-----HRCLQGVSKDCFFSCLNNVPCLPTLHLGDGHWDCTSGEDESPNHVEEALR 1066
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D + C + + C+P + CD + DC + DE + + P E
Sbjct: 1067 DHWGTCSHTCPSVYGNTTCVPDVFTCDGDADC-----LGGEDEQMCDAGTTASSHKGPGE 1121
Query: 345 --------LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
L C+ CDG PDC + EDE
Sbjct: 1122 YCPTISCFLPGAPDPYCLPTHLICDGHPDCMSEEDE 1157
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 101/255 (39%), Gaps = 41/255 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C CGS +C+ S CDG DCS+G DE NA F CG G+ +P S C
Sbjct: 322 CAYKGWECGS-GECIDPSAVCDGDKDCSSGADEDNCYNATTAFQPFECG-GRSVPYSRFC 379
Query: 225 DGFVDCLEDGSDEPNTCI----HQCFNGQVQCALSKKCIPHNW---------LCDEEMDC 271
DG DC +G DE N + F+ V LSK I ++ + +M
Sbjct: 380 DGRSDC-RNGQDEMNCRTRGPWYIIFDLVVPYTLSKISITNDGGDFDTHDVTAFNFQMSA 438
Query: 272 ST-----DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
S+ +D+ TD + Q F G + K + + +
Sbjct: 439 SSNPFAWEDVAVVTDVETTDTPQEFGGFSVTSRFWKLL-------------VTETGNGDS 485
Query: 327 EDWDKY-----FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + F ++C ++ C C++L+ CD K DCS GEDE C +
Sbjct: 486 NDWQPWLREVGFFGQRIVCDEDQFYC-LDGTCLSLALHCDSKTDCSGGEDE-ERCAGICN 543
Query: 382 CENLKCSHKCSPTPR 396
L+C +C P R
Sbjct: 544 SLQLECDSRCLPKYR 558
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A +C+ +L C S +C+ + CDG DCS+G DE + C QF C G C+ ES
Sbjct: 539 AGICNSLQLECDS--RCLPKYRACDGFQDCSDGRDEENCVTSGCASKQFLCSDGTCLMES 596
Query: 222 WKCDGFVDCLEDGSDE 237
CD DC E G DE
Sbjct: 597 QLCDRQTDCSE-GEDE 611
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 10/113 (8%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C QF C G C+ + CD DC G ++ C C + Q++C +C+P
Sbjct: 504 CDEDQFYCLDGTCLSLALHCDSKTDC--SGGEDEERCAGICNSLQLEC--DSRCLPKYRA 559
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DCS D DE+ C + Q C+ C+ + LCD + DCS
Sbjct: 560 CDGFQDCS-----DGRDEENCVTSGCASKQFLCS-DGTCLMESQLCDRQTDCS 606
>gi|47216575|emb|CAG00610.1| unnamed protein product [Tetraodon nigroviridis]
Length = 672
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 101/241 (41%), Gaps = 33/241 (13%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C+ + C S+ C+P + CDE M C H C C + KC
Sbjct: 60 HCWQDEFACG-SRGCVPLRFRCDE-MSC----------------HNCT--AFSCGQADKC 99
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH--NAVLCHPNELRCGSSNQCVALSKFCD 361
+ LCD DC D DE S NA C +E RCG CVA + CD
Sbjct: 100 LSRTQLCDGRADCR-----DGRDESPKLCASSRPNAQACKSSEFRCGD-GPCVAQTYRCD 153
Query: 362 GKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECL 420
DC++G DE N+ +N CSH C P G +C CP + QC + D CL
Sbjct: 154 NWKDCADGSDEVDCDQNECAVDNGGCSHGCRDLPLGFICECPRDMVLVGEYQCEEVDACL 213
Query: 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
CDQ C + S C C + Y + P C A + + A ++F+S+ +R ++
Sbjct: 214 DADVCDQVCIPANGSLTCGCHQDYKMSPTTGECKA----KGDEARVVFTSSQGLRWTSIS 269
Query: 481 G 481
G
Sbjct: 270 G 270
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGP-FC-----NAE-CTPGQFSCGMGKCIPESWKC 224
CG +++C++ ++ CDG+ DC +G DE P C NA+ C +F CG G C+ ++++C
Sbjct: 93 CGQADKCLSRTQLCDGRADCRDGRDESPKLCASSRPNAQACKSSEFRCGDGPCVAQTYRC 152
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
D + DC DGSDE + ++C C+ + +P ++C+
Sbjct: 153 DNWKDC-ADGSDEVDCDQNECAVDNGGCSHGCRDLPLGFICE 193
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E++G+ G +R LVT +I+ P +L +D + +LYW D T+ V +G H +
Sbjct: 391 KIERSGLDGRDRKALVTHSIRHPVALSLDLPRQLLYWADQGAKTISRVNFEGRHRRTVVE 450
Query: 167 PN 168
N
Sbjct: 451 SN 452
>gi|348574051|ref|XP_003472804.1| PREDICTED: sortilin-related receptor-like [Cavia porcellus]
Length = 2211
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1118 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1177
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1178 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1230
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1231 SCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTRFMD 1277
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1278 FVCKNRQQCLFHSMVCDGIIQCRDGSDEDP 1307
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1075 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1130
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1131 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1183
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1184 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1229
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 1230 VSCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMD 1277
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 96/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1334 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1392
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ F +C+ + C+ W+CD DC+
Sbjct: 1393 DWSDEKDCGDSHILPSPTPGPSTCLPNYF----RCS-NGACVMDTWVCDGYRDCA----- 1442
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + QC + QC KKCIP+ CD DC D
Sbjct: 1443 DGSDEEACPSLANVTAPSTPTQVGQCDRFEFQCHQPKKCIPNWKRCDGHQDCQ-----DG 1497
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1498 QDEA--NCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDE 1543
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 136/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GSH +L
Sbjct: 940 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKFSGSHMEILAS 996
Query: 167 P----------NELRCGSSNQCVA-------LSKFCDGKP-------------------D 190
+ + SN CV L K + K D
Sbjct: 997 QLTGLMDMKIFYKGKNTGSNACVPSPCSLLCLPKANNSKSCRCPEGVASSVLPSGDLLCD 1056
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1057 CPQGYQLKNNTCVKEENTCLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1115
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1116 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1169
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1170 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1218
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P K C +C + C P+ +
Sbjct: 1219 TDCQDGSDEDPVSCEK-KCNGFRCPNGTCIPSSK 1251
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC---------NAECTPGQFSCGMGKCIPESW 222
C + QC+ S CDG C +G DE P + C F C G CI W
Sbjct: 1280 CKNRQQCLFHSMVCDGIIQCRDGSDEDPAFAGCSQDPEFHRVCDEFGFQCQNGVCISLIW 1339
Query: 223 KCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
KCDG DC D SDE N T C Q +C + CIP+ W CD E DC D
Sbjct: 1340 KCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPNRWKCDRENDCG--DWS 1395
Query: 278 DNTD--------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
D D C +C+ + C+ W+CD DC+ D +DE+
Sbjct: 1396 DEKDCGDSHILPSPTPGPSTCLPNYFRCS-NGACVMDTWVCDGYRDCA-----DGSDEEA 1449
Query: 330 DKYFSHNAVLCHPN--------ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
++ P E +C +C+ K CDG DC +G+DE
Sbjct: 1450 CPSLANVTAPSTPTQVGQCDRFEFQCHQPKKCIPNWKRCDGHQDCQDGQDEA 1501
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P F C G C+ ++W
Sbjct: 1378 CIPNRWKCDRENDCGDWSDEKDCGDSHILPSPTPGP---STCLPNYFRCSNGACVMDTWV 1434
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T + QC + QC KKCIP+ CD D
Sbjct: 1435 CDGYRDC-ADGSDEEACPSLANVTAPSTPTQVGQCDRFEFQCHQPKKCIPNWKRCDGHQD 1493
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1494 CQ-----DGQDEANCPTHSTLTCMSREFKCEDGEACIVLSERCDGFLDCS 1538
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 117/293 (39%), Gaps = 64/293 (21%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + ++ M G + LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 895 LNPGIYRSNMDGSSAHRLVSEDVKWPNGIAVD--DQWIYWTDAYLDCIERITFSGQQRSV 952
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S+ E Q +
Sbjct: 953 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKFSGSH---------MEILASQLTG 1000
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQC----ALSKKCIPH-NWL 264
M I K G C+ P+ C C N C ++ +P + L
Sbjct: 1001 LMDMKIFYKGKNTGSNACV------PSPCSLLCLPKANNSKSCRCPEGVASSVLPSGDLL 1054
Query: 265 CD----EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
CD ++ +T +NT C Q +C+ + CI W CD + DC
Sbjct: 1055 CDCPQGYQLKNNTCVKEENT---------CLRNQYRCS-NGNCINSIWWCDFDNDCG--- 1101
Query: 321 IVDNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1102 --DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1147
>gi|410967312|ref|XP_003990164.1| PREDICTED: low-density lipoprotein receptor-related protein 8
[Felis catus]
Length = 724
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSK 301
+ +C Q +C +++CIP W CDE+ DCS DN+DED C + C +
Sbjct: 35 VKECEEDQFRCR-NERCIPSVWRCDEDDDCS-----DNSDEDDCPKKTCADSDFTCG-NG 87
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG-SSNQCVALSKFC 360
CIP W CD E +C D +DE + +C +L CG +S++CV S C
Sbjct: 88 HCIPERWKCDGEEECP-----DGSDE---AETTCTKQVCPAEKLSCGPASHKCVPASWRC 139
Query: 361 DGKPDCSNGEDEGPFCNNKADCEN--LKCS-HKCSPTPRGAMCFCPAGQNPNKTQCVDA- 416
DG+ DC +G DE + C +C C PT + ++ C+
Sbjct: 140 DGEKDCESGADEAGCATSLGTCRGDEFQCGDGTCVPTIKRCNQEQDCLDGSDEAGCLQGL 199
Query: 417 DECLID-GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
+ECL + G C CT+ + + C+C GY L D K+C A P S+IF++ ++R
Sbjct: 200 NECLHNNGGCSHICTDLKIGFECTCPAGYQLL-DQKTCGAGRSP-----SLIFTNRHEVR 253
Query: 476 RIHL 479
RI L
Sbjct: 254 RIDL 257
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 98/233 (42%), Gaps = 22/233 (9%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC QF C +CIP W+CD DC D SDE + C + C + CIP W
Sbjct: 37 ECEEDQFRCRNERCIPSVWRCDEDDDC-SDNSDEDDCPKKTCADSDFTCG-NGHCIPERW 94
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D + K C ++ C S KC+P +W CD E DC +
Sbjct: 95 KCDGEEECP--DGSDEAETTCTK-QVCPAEKLSCGPASHKCVPASWRCDGEKDCES---- 147
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
DE + + C +E +CG CV K C+ + DC +G DE +C
Sbjct: 148 -GADE---AGCATSLGTCRGDEFQCGDGT-CVPTIKRCNQEQDCLDGSDEAGCLQGLNEC 202
Query: 383 --ENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
N CSH C+ G C CPAG Q +D C S TN H
Sbjct: 203 LHNNGGCSHICTDLKIGFECTCPAGY-----QLLDQKTCGAGRSPSLIFTNRH 250
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 79/168 (47%), Gaps = 18/168 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ CD DCS+ DE C F+CG G CIPE WKC
Sbjct: 38 CEEDQFRC-RNERCIPSVWRCDEDDDCSDNSDEDDCPKKTCADSDFTCGNGHCIPERWKC 96
Query: 225 DGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
DG +C DGSDE TC Q C ++ C S KC+P +W CD E DC + D
Sbjct: 97 DGEEEC-PDGSDEAETTCTKQVCPAEKLSCGPASHKCVPASWRCDGEKDCES-----GAD 150
Query: 282 EDW--DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
E C + QC C+P C++E DC +D +DE
Sbjct: 151 EAGCATSLGTCRGDEFQCG-DGTCVPTIKRCNQEQDC-----LDGSDE 192
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 38/58 (65%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ + G + +L
Sbjct: 384 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLNQRLYWVDSKLHQLSSIDLSGGNRKML 441
>gi|345324392|ref|XP_001505297.2| PREDICTED: sortilin-related receptor [Ornithorhynchus anatinus]
Length = 2177
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/325 (30%), Positives = 137/325 (42%), Gaps = 63/325 (19%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGS----- 159
+R+E+ G+ RS ++ ++ P ++ + N+ +YW D S L+ + + GS
Sbjct: 902 DRIERVDFSGQQRS-VILDSLPHPYAIAVFKNE--IYWDDWSQLSIFRASKFSGSRMEVL 958
Query: 160 --------------------HNAVLCHPNELRC----GSSNQC-----VALSKFCDGKP- 189
HNA + P L C +S C V+ S G+
Sbjct: 959 VGQLTGIMDMKIFYRGKTKGHNACVSKPCGLLCLPKANNSRSCRCPEGVSGSLLPSGELR 1018
Query: 190 -DCSNGE--DEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH 243
DC G D C E C PGQF C G CI W+CD DC D SDE N
Sbjct: 1019 CDCPRGYRLDNDSSCVREDDGCLPGQFRCSNGNCINSVWRCDFDNDC-GDMSDEANCPST 1077
Query: 244 QC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
C Q +C S+ CIP ++ CD E DCS D++DE + HQC + C S
Sbjct: 1078 VCDPETQFRCEESEACIPLSYKCDLEDDCS-----DHSDESHCETHQCRGDEFNCT-SGM 1131
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CI +W+CD + DC D +DE SH C +C + C+ CDG
Sbjct: 1132 CIRASWVCDGDNDCR-----DWSDEANCTALSHT---CEATSFQC-HNRHCIPQRWACDG 1182
Query: 363 KPDCSNGEDEGPFCNNKADCENLKC 387
PDC +G DE P N + C C
Sbjct: 1183 DPDCQDGSDEDP-ANCEKKCNGFHC 1206
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 162 AVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+ +C P + RC S C+ LS CD + DCS+ DE +C +F+C G CI
Sbjct: 1076 STVCDPETQFRCEESEACIPLSYKCDLEDDCSDHSDESHCETHQCRGDEFNCTSGMCIRA 1135
Query: 221 SWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDI 276
SW CDG DC D SDE N H C QC ++ CIP W CD + DC +D+
Sbjct: 1136 SWVCDGDNDC-RDWSDEANCTALSHTCEATSFQCH-NRHCIPQRWACDGDPDCQDGSDED 1193
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
N ++ + FH C NG CIP + CD DC +DE H
Sbjct: 1194 PANCEKKCNGFH-CPNG--------TCIPASKHCDGVQDCP-----GGSDEQ------HC 1233
Query: 337 AVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
LC + C + QC+ S CDG C +G DE
Sbjct: 1234 EPLCTRYMDFVCKNRQQCLFHSMVCDGIVHCRDGSDE 1270
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 96/234 (41%), Gaps = 38/234 (16%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPGQFSCGMGKCIP 219
+ C + QC+ S CDG C +G DE P + C F C G C+
Sbjct: 1242 DFVCKNRQQCLFHSMVCDGIVHCRDGSDEDAGYAGCTQDPEFHKVCDQFSFQCQNGVCVS 1301
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCS-- 272
WKCDG DC D SDE N T C Q QC +++CIP+ W CD E DC
Sbjct: 1302 LIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFQCE-NRRCIPNRWKCDRENDCGDW 1359
Query: 273 ------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
D + + C +C+ C+ ++W+CD DC+ D +D
Sbjct: 1360 SDEKDCGDAYIPLPSPSPAEPPTCAPNHFRCS-GGACVINSWVCDGYRDCA-----DGSD 1413
Query: 327 EDWDKYFSHNAVL--------CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E+ F+ C E C +C+ K CDG+PDC +G DE
Sbjct: 1414 EEACPSFASFTPSSPTPWLGHCSRFEFECQQPRKCIPNWKRCDGQPDCQDGTDE 1467
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 73/173 (42%), Gaps = 30/173 (17%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNG----EDEGPFCNAECTPGQFSCGMGKCIPE 220
C PN +C N C + D K DC + P C P F C G C+
Sbjct: 1343 CIPNRWKCDRENDC---GDWSDEK-DCGDAYIPLPSPSPAEPPTCAPNHFRCSGGACVIN 1398
Query: 221 SWKCDGFVDCLEDGSDE-------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
SW CDG+ DC DGSDE P + C + +C +KCIP+ CD
Sbjct: 1399 SWVCDGYRDC-ADGSDEEACPSFASFTPSSPTPWLGHCSRFEFECQQPRKCIPNWKRCDG 1457
Query: 268 EMDCSTDDIVDNTDED--WDKFHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
+ DC D TDE W Q C +G+ +C + C+ + CD +DCS
Sbjct: 1458 QPDCQ-----DGTDETNCWTPSSQTCVSGKFKCEDGEICLVLSERCDGFLDCS 1505
>gi|357610077|gb|EHJ66814.1| putative sortilin-related receptor containing LDLR class A repeats
preproprotein [Danaus plexippus]
Length = 1127
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 98/209 (46%), Gaps = 21/209 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P E C + +C+ + CDG DC +G DE C P + +C G+C W+C
Sbjct: 743 CSPEEFSC-KNGRCIRSTWRCDGNDDCGDGSDE---VGCGCAPPRIACD-GRCYLPHWRC 797
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG +DC D SDE + C Q QCA + CI W+CD + DC N +
Sbjct: 798 DGDMDC-ADNSDEKDCGKQNCTENQFQCA-NGNCIEKRWVCDGDNDCKDGSDERNCTQSL 855
Query: 285 DKFHQCFN--GQV-QCA--LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
K N G V C+ + CIP++W+CD E DC + D T+E
Sbjct: 856 PKRPVTVNCSGHVFACSNDTNALCIPNSWVCDGERDCLGGE--DETEE------RCTNST 907
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSN 368
C P RC S +C+ +S CDG+ DCS+
Sbjct: 908 CAPYMFRC-PSGKCIYMSWVCDGENDCSD 935
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 91/232 (39%), Gaps = 46/232 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESWKCDGFVDCLE-DG 234
C+ S CDG+ DC GEDE N+ C P F C GKCI SW CDG DC + D
Sbjct: 879 CIPNSWVCDGERDCLGGEDETEERCTNSTCAPYMFRCPSGKCIYMSWVCDGENDCSDVDS 938
Query: 235 SDEPN-TCIHQ------------------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
SDE N T I C +C + C+P+ W CD DC
Sbjct: 939 SDEKNCTSIGHSKLIPRPTEKPDFGTKGSCLEWMFKCD-NGVCLPYWWRCDGTNDCG--- 994
Query: 276 IVDNTDE---------------DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
DN+DE + + +C Q C CIP W+CD DC
Sbjct: 995 --DNSDEAACGLRPDNKTHITPEREVKQKCAKNQFTCE-PGVCIPLTWVCDSVSDCIDGS 1051
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DK + C P C + C+A + CDG DC + DE
Sbjct: 1052 DESGCDRRHDK--GDTGLRCEPAATPCADGSACIADHQLCDGVIDCGDHSDE 1101
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 99/233 (42%), Gaps = 35/233 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + C +C CDG DC++ DE CT QF C G CI + W C
Sbjct: 779 CAPPRIAC--DGRCYLPHWRCDGDMDCADNSDEKDCGKQNCTENQFQCANGNCIEKRWVC 836
Query: 225 DGFVDCLEDGSDEPN--------TCIHQCFNGQVQCA--LSKKCIPHNWLCDEEMDCSTD 274
DG DC +DGSDE N C C+ + CIP++W+CD E DC
Sbjct: 837 DGDNDC-KDGSDERNCTQSLPKRPVTVNCSGHVFACSNDTNALCIPNSWVCDGERDCLGG 895
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
+ D T+E C +C S KCI +W+CD E DCS VD++DE
Sbjct: 896 E--DETEERCTN-STCAPYMFRCP-SGKCIYMSWVCDGENDCSD---VDSSDEKNCTSIG 948
Query: 335 HNAVLCHPNE--------------LRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
H+ ++ P E +C + C+ CDG DC + DE
Sbjct: 949 HSKLIPRPTEKPDFGTKGSCLEWMFKC-DNGVCLPYWWRCDGTNDCGDNSDEA 1000
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 100/231 (43%), Gaps = 34/231 (14%)
Query: 183 KFCDGKPDCSNGEDEGPFCN-----AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
K +GK C NG + P C+P +FSC G+CI +W+CDG DC DGSDE
Sbjct: 716 KKINGKCMCPNGLEPTPNMTCPKQAGSCSPEEFSCKNGRCIRSTWRCDGNDDC-GDGSDE 774
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C + A +C +W CD +MDC+ DN+DE C Q QC
Sbjct: 775 VG-----CGCAPPRIACDGRCYLPHWRCDGDMDCA-----DNSDEKDCGKQNCTENQFQC 824
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCG--SSNQCVA 355
A + CI W+CD + DC N + K V C + C ++ C+
Sbjct: 825 A-NGNCIEKRWVCDGDNDCKDGSDERNCTQSLPK--RPVTVNCSGHVFACSNDTNALCIP 881
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ 406
S CDG+ DC GEDE + C N C+ M CP+G+
Sbjct: 882 NSWVCDGERDCLGGEDE-----TEERCTNSTCAP--------YMFRCPSGK 919
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI-QWPSSLVIDYNQDILYWCDSHLNTVE 152
WD P + ++ + G N + L TK I QWP+ + ID D +YW D+ + +
Sbjct: 556 WDRKNPSV-------SRSNLDGSNVTKLFTKPIVQWPNGITIDQMSDRIYWVDALEDYIA 608
Query: 153 SVRVDGSH 160
S ++G +
Sbjct: 609 SADLNGQY 616
>gi|194212791|ref|XP_001501418.2| PREDICTED: sortilin-related receptor [Equus caballus]
Length = 2146
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1053 TQFRCQESGSCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1112
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1113 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1165
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1166 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTRFMD 1212
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1213 FVCKNRQQCLFHSMVCDGIVQCRDGSDEDP 1242
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 104/226 (46%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C N+ RC S+ +C+ +CD DC + DE C QF C G CIP S+
Sbjct: 1010 CLRNQYRC-SNGKCINSIWWCDFDNDCGDMSDERNCPTTICDLDTQFRCQESGSCIPLSY 1068
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 1069 KCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DWSDE 1121
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD + DC D +DED V C
Sbjct: 1122 ANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDTDCQ-----DGSDED--------PVNC 1167
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 1168 EKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTRFMD 1212
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 99/230 (43%), Gaps = 55/230 (23%)
Query: 178 CVALSKFCDGKPDCSNGEDEG----PFCNAECTPG-QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE P C+ QF C G C+P WKCD DC
Sbjct: 1269 CISLIWKCDGMDDCGDYSDEANCEYPTEAPNCSRYFQFQCENGHCVPNRWKCDRENDCGD 1328
Query: 231 ------------LEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
L + EP+TC+ ++C NG C+ +W+CD DC+
Sbjct: 1329 WSDERDCGDSYLLPSPTPEPSTCLPNYYRCSNG--------ACVMDSWVCDGYRDCA--- 1377
Query: 276 IVDNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
D +DE+ +F +C + +C KKCIP+ CD DC
Sbjct: 1378 --DGSDEEVCPSPANVTPASTPTQFGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ----- 1430
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE +H+ + C +E +C C+ LS+ CDG DCS+ DE
Sbjct: 1431 DGQDEA--NCPTHSTLTCMSSEFKCEDGEACIVLSERCDGFLDCSDESDE 1478
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 135/334 (40%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS A+L
Sbjct: 875 IERITFSGQQRS-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMAILAS 931
Query: 167 P----------NELRCGSSNQCVAL--SKFCDGKPD------CSNGEDEGPFCNAE---- 204
+ + SN CV S C K + C G + +
Sbjct: 932 QLTGLMDMKIFYKGKTTGSNACVPQPCSLLCLPKANNSKSCRCPEGVASSVLPSGDLMCE 991
Query: 205 ------------------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C Q+ C GKCI W CD DC D SDE N C
Sbjct: 992 CPHGYQLRNNTCVKEENTCLRNQYRCSNGKCINSIWWCDFDNDC-GDMSDERNCPTTICD 1050
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1051 LDTQFRCQESGSCIPLSYKCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIR 1104
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1105 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-HNGHCIPQRWACDGD 1153
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1154 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1186
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 95/245 (38%), Gaps = 60/245 (24%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC--------NAECTPGQFSCGMGKCIP 219
+ C + QC+ S CDG C +G DE P F C F C G CI
Sbjct: 1212 DFVCKNRQQCLFHSMVCDGIVQCRDGSDEDPEFAGCSHDPEFRKVCDEFSFQCLNGVCIS 1271
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTD 274
WKCDG DC D SDE N T C Q QC + C+P+ W CD E DC
Sbjct: 1272 LIWKCDGMDDC-GDYSDEANCEYPTEAPNCSRYFQFQCE-NGHCVPNRWKCDRENDCG-- 1327
Query: 275 DIVDNTDED------------------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
D +DE +++C NG C+ +W+CD DC
Sbjct: 1328 ---DWSDERDCGDSYLLPSPTPEPSTCLPNYYRCSNG--------ACVMDSWVCDGYRDC 1376
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPN--------ELRCGSSNQCVALSKFCDGKPDCSN 368
+ D +DE+ ++ P E C +C+ K CDG DC +
Sbjct: 1377 A-----DGSDEEVCPSPANVTPASTPTQFGRCDRFEFECHQPKKCIPNWKRCDGHQDCQD 1431
Query: 369 GEDEG 373
G+DE
Sbjct: 1432 GQDEA 1436
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ K CDG DC +G+DE C +F C G+ CI
Sbjct: 1403 CDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCMSSEFKCEDGEACIVL 1462
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1463 SERCDGFLDC-SDESDE 1478
>gi|281352005|gb|EFB27589.1| hypothetical protein PANDA_008209 [Ailuropoda melanoleuca]
Length = 4388
Score = 81.6 bits (200), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C P+E C S C+ CDG+ DC +G DE GP + C P +F CG G C +
Sbjct: 264 CGPHEATC-HSGHCIPKDYICDGQEDCKDGSDELDCGP--SPPCEPNEFPCGNGHCALKL 320
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC ED +DE + + C Q +C + CIP ++ CDEE DC
Sbjct: 321 WHCDGDFDC-EDRTDETDCPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCP----- 374
Query: 278 DNTDE 282
D +DE
Sbjct: 375 DRSDE 379
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC---GMGKCIPES 221
C E C S N+C+AL CD +PDC + DE N E + S + + P +
Sbjct: 178 CTEAEFACHSHNECIALEYRCDRRPDCRDMSDE---LNCEEPVPELSSVAPALAETTPLA 234
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ + G P + C + C S CIP +++CD + DC
Sbjct: 235 PEPEVTTPQPLPGVPAPQLLVPSPGRPLPCGPHEATCH-SGHCIPKDYICDGQEDCK--- 290
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE D C + C + C W CD + DC D TDE D
Sbjct: 291 --DGSDELDCGPSPPCEPNEFPCG-NGHCALKLWHCDGDFDCE-----DRTDET-DCPAK 341
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 342 RPEDVCGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 379
>gi|301768302|ref|XP_002919581.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein-like [Ailuropoda melanoleuca]
Length = 4428
Score = 81.6 bits (200), Expect = 8e-13, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 16/125 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C P+E C S C+ CDG+ DC +G DE GP + C P +F CG G C +
Sbjct: 308 CGPHEATC-HSGHCIPKDYICDGQEDCKDGSDELDCGP--SPPCEPNEFPCGNGHCALKL 364
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC ED +DE + + C Q +C + CIP ++ CDEE DC
Sbjct: 365 WHCDGDFDC-EDRTDETDCPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCP----- 418
Query: 278 DNTDE 282
D +DE
Sbjct: 419 DRSDE 423
Score = 70.9 bits (172), Expect = 1e-09, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 88/218 (40%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC---GMGKCIPES 221
C E C S N+C+AL CD +PDC + DE N E + S + + P +
Sbjct: 222 CTEAEFACHSHNECIALEYRCDRRPDCRDMSDE---LNCEEPVPELSSVAPALAETTPLA 278
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ + G P + C + C S CIP +++CD + DC
Sbjct: 279 PEPEVTTPQPLPGVPAPQLLVPSPGRPLPCGPHEATCH-SGHCIPKDYICDGQEDCK--- 334
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE D C + C + C W CD + DC D TDE D
Sbjct: 335 --DGSDELDCGPSPPCEPNEFPCG-NGHCALKLWHCDGDFDCE-----DRTDET-DCPAK 385
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 386 RPEDVCGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 423
>gi|189237255|ref|XP_972068.2| PREDICTED: similar to AGAP003656-PA [Tribolium castaneum]
Length = 4254
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 125/295 (42%), Gaps = 71/295 (24%)
Query: 155 RVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGM 214
RV + V+C NE+ C S +CV C+G +C++ DE +C G+ SC +
Sbjct: 411 RVFEASTNVMCDVNEIPC-HSGECVPSEARCNGNFECADHSDEA---GCDCAKGEISCDI 466
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+CIPES +CDG DC +D +DE + + C + +++C KCIP N CD DCS
Sbjct: 467 TRCIPESKRCDGMKDC-QDDTDERDCIV--CRDDEIKC--DNKCIPLNKRCDGTADCS-- 519
Query: 275 DIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIV-- 322
+ DE + QC + + C S +CIP CD +E DCS V
Sbjct: 520 ---NRADELNCPAEAQCRHDEFLCHGSSQCIPLQQRCDGNRNCPNNEDETDCSGMLYVLL 576
Query: 323 ----------------------------DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
D +DE + + + C ++ +C C+
Sbjct: 577 RCGADQFTCQNGACIPISAKCDSKYDCQDLSDERNCRPGTPDYKYCTSDQFKC-KEGTCI 635
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRG----AMCFCPAG 405
+LSK CDGK DC GEDE L C + S P G A FC G
Sbjct: 636 SLSKRCDGKFDCGQGEDE------------LSCGYPLSKCPEGTFECAAGFCIMG 678
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 64/259 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNAECTPGQFSCGMG 215
G+ + C ++ +C C++LSK CDGK DC GEDE + ++C G F C G
Sbjct: 615 GTPDYKYCTSDQFKC-KEGTCISLSKRCDGKFDCGQGEDELSCGYPLSKCPEGTFECAAG 673
Query: 216 KCIPESWKCDGFVDCLEDGSDE--------PNTCIHQCFNGQVQCALSKKCIPHNWLCDE 267
CI +C+G DC G+DE P T C + + +C +CI ++ CD+
Sbjct: 674 FCIMGYKRCNGIKDC-PSGNDEDGCPTTITPVTPEPSCASSEFRCN-DGRCIDISYRCDD 731
Query: 268 EMD---------------CSTDDIV-------------------DNTDEDWDKFHQCFNG 293
D C+TD+++ D +DE F C
Sbjct: 732 IPDCRDKSDEINCYSAGACATDEVLCNDGSCVSGKKCDRSFDCPDGSDESGCSF--CTPD 789
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q C CI + CD + CS D +DE C P++ CG S+ C
Sbjct: 790 QFPCQ-GGGCIAEHLRCDGTIHCS-----DGSDE--------RNCGCLPSQFDCGDSS-C 834
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG DC NG DE
Sbjct: 835 INSEFRCDGYQDCKNGRDE 853
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIP 219
+ C P C S ++C+ S+FCDG+ DC++ DE P C+ GQF C G CI
Sbjct: 1032 ITCSPGTQPCHSGDRCILHSQFCDGRVDCNDMSDETNCQPKREGACSRGQFRCENGPCIR 1091
Query: 220 ESWKCDGFVDCLEDGSDE 237
E +CDG VDC D SDE
Sbjct: 1092 EELRCDGKVDCPRDSSDE 1109
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 103/250 (41%), Gaps = 66/250 (26%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P++ C C+A CDG CS+G DE N C P QF CG CI ++
Sbjct: 785 FCTPDQFPC-QGGGCIAEHLRCDGTIHCSDGSDER---NCGCLPSQFDCGDSSCINSEFR 840
Query: 224 CDGFVDCLEDGSDEPNTCIHQCF-NGQVQCALSKKCIPHNWLCD---------EEMDCST 273
CDG+ DC ++G DE C + +C+ CIP++ CD +E+DC
Sbjct: 841 CDGYQDC-KNGRDEMECSSTYCHEEDEFRCS-DGTCIPNSAFCDGVRHCRDGSDELDCPP 898
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE------ 327
+ +E QC NG+ CIP+ CD +C D +DE
Sbjct: 899 PPSICTVNE-----FQCDNGE--------CIPNYLRCDGVSECP-----DRSDERECRTC 940
Query: 328 ---DW---------------DKYF-------SHNAVLCHPNELRCGSSNQCVALSKFCDG 362
DW D ++ N C ++ +C S+ C+A + C+
Sbjct: 941 HEPDWFQCSDGLCVDATLRCDNFYDCRDFSDEQNCFECRTDQFQC-SNGTCIAGNLRCNR 999
Query: 363 KPDCSNGEDE 372
+ DCS+G DE
Sbjct: 1000 RNDCSDGSDE 1009
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 95/218 (43%), Gaps = 23/218 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSC-GMGKCIP 219
++C +E++C N+C+ L+K CDG DCSN DE P A+C +F C G +CIP
Sbjct: 492 IVCRDDEIKC--DNKCIPLNKRCDGTADCSNRADELNCP-AEAQCRHDEFLCHGSSQCIP 548
Query: 220 ESWKCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
+CDG +C + DE + + +C Q C + CIP + CD + DC
Sbjct: 549 LQQRCDGNRNC-PNNEDETDCSGMLYVLLRCGADQFTCQ-NGACIPISAKCDSKYDCQDL 606
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
N + C + Q +C CI + CD + DC + + K
Sbjct: 607 SDERNCRPGTPDYKYCTSDQFKCK-EGTCISLSKRCDGKFDCGQGEDELSCGYPLSK--- 662
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C C ++ C+ K C+G DC +G DE
Sbjct: 663 -----CPEGTFEC-AAGFCIMGYKRCNGIKDCPSGNDE 694
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE +C + +C+ CDG +C + DE C P F C G C+ + +
Sbjct: 902 ICTVNEFQC-DNGECIPNYLRCDGVSECPDRSDERE-CRTCHEPDWFQCSDGLCVDATLR 959
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CD F DC D SDE N +C Q QC+ + CI N C+ DCS N
Sbjct: 960 CDNFYDC-RDFSDEQN--CFECRTDQFQCS-NGTCIAGNLRCNRRNDCSDGSDEFNCPTQ 1015
Query: 284 WDKFHQ------------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
F C G C +CI H+ CD +DC +D+ D T+ +
Sbjct: 1016 PPPFVTEQPLPPRPPQITCSPGTQPCHSGDRCILHSQFCDGRVDC--NDMSDETNCQPKR 1073
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+ C + RC + C+ CDGK DC
Sbjct: 1074 EGA-----CSRGQFRC-ENGPCIREELRCDGKVDC 1102
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 14/117 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNA-----ECTPGQFSCGMGKCIPESWKCDGFV 228
S+ C+ + CD K DC++G DE C+ C P +F C KC+ ++W+CD
Sbjct: 1232 SNGDCIPKHQVCDEKYDCTDGSDEN-RCSKLGHPNGCEPNEFRCANKKCVLKTWRCDSDD 1290
Query: 229 DCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DC + +E N C Q C + +CIP ++ CD E DC +D +DE
Sbjct: 1291 DCGDGSDEENCATNPPGSLCAYHQFACHSNNQCIPRSYHCDLERDC-----IDGSDE 1342
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CIP + +CDE+ DC TD +N + C + +CA +KKC+ W CD + DC
Sbjct: 1236 CIPKHQVCDEKYDC-TDGSDENRCSKLGHPNGCEPNEFRCA-NKKCVLKTWRCDSDDDCG 1293
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+N + LC ++ C S+NQC+ S CD + DC +G DE
Sbjct: 1294 DGSDEENCATNPP------GSLCAYHQFACHSNNQCIPRSYHCDLERDCIDGSDE 1342
>gi|291231699|ref|XP_002735800.1| PREDICTED: matriptase-like [Saccoglossus kowalevskii]
Length = 761
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 26/215 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN--AECTPGQFSCGMGKCIPES 221
C P++ C ++N C+ L+ CD DC + DE CN + C P F C C+P +
Sbjct: 282 CLPDDFVC-ANNLCMPLNWACDDYDDCGDNSDEDAAICNSPSTCFPDDFVCANSVCLPLN 340
Query: 222 WKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD + DC ++ ++ C C +G+ C+ + C+P NW+CD+ DC D D
Sbjct: 341 WVCDNYDDCGDNSDEDDAICNPSSTCPSGEFLCS-NGLCLPSNWVCDDYDDCG--DNSDE 397
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+ + C G+ C S CI NW CD+ DC DN+DE N +
Sbjct: 398 VSAECNSSSTCRPGEFVCD-SGLCILPNWACDDYDDCG-----DNSDE--------NEAM 443
Query: 340 CH--PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ + RC + C+ SK CDG DCS+ DE
Sbjct: 444 CNLCDFQFRC-TDGSCIESSKLCDGTFDCSDTSDE 477
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 105/231 (45%), Gaps = 28/231 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNAECTPGQFSCGMGKCI 218
C P + C S++ C+ L+ CD DC + DE P + C PG+ C G C+
Sbjct: 195 CLPYDFVC-SNSLCLPLNWVCDDYDDCGDNSDEDAAICNSPLTSPTCLPGELVCDNGLCL 253
Query: 219 PESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
+ CD + DC ++ ++P C + C CA + C+P NW CD+ DC
Sbjct: 254 SHTLVCDNYDDCGDNSDEDPTLCNSPYTCLPDDFVCA-NNLCMPLNWACDDYDDCG---- 308
Query: 277 VDNTDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
DN+DED + CF CA + C+P NW+CD DC DN+DE D
Sbjct: 309 -DNSDEDAAICNSPSTCFPDDFVCA-NSVCLPLNWVCDNYDDCG-----DNSDE--DDAI 359
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADCE 383
+ + C E C S+ C+ + CD DC + DE CN+ + C
Sbjct: 360 CNPSSTCPSGEFLC-SNGLCLPSNWVCDDYDDCGDNSDEVSAECNSSSTCR 409
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 101/213 (47%), Gaps = 27/213 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCN--AECTPGQFSCGMGKCIPES 221
C P++ C +S C+ L+ CD DC + DE CN + C G+F C G C+P +
Sbjct: 324 CFPDDFVCANS-VCLPLNWVCDNYDDCGDNSDEDDAICNPSSTCPSGEFLCSNGLCLPSN 382
Query: 222 WKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD + DC ++ + C C G+ C S CI NW CD+ DC DN
Sbjct: 383 WVCDDYDDCGDNSDEVSAECNSSSTCRPGEFVCD-SGLCILPNWACDDYDDCG-----DN 436
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ + C + Q +C CI + LCD DCS D +DE +N
Sbjct: 437 SDENEAMCNLC-DFQFRCT-DGSCIESSKLCDGTFDCS-----DTSDE-------YNCNS 482
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C+ ++ C C++L+ CDG DC++ DE
Sbjct: 483 CNNDQFIC-DDGSCISLTLQCDGNNDCADNSDE 514
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 104/267 (38%), Gaps = 65/267 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN--------------------- 202
C P E C + C+ + C+ DC + DE P CN
Sbjct: 116 CLPGEFVC-DNGLCLPHTLVCNNYDDCGDNSDEDPAICNYRDSCLTDPCQHGVCTAIVHG 174
Query: 203 ------------------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC--- 241
+ C P F C C+P +W CD + DC ++ ++ C
Sbjct: 175 YTCDCFLGFTGTNCDTAPSTCLPYDFVCSNSLCLPLNWVCDDYDDCGDNSDEDAAICNSP 234
Query: 242 --IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED---WDKFHQCFNGQVQ 296
C G++ C + C+ H +CD DC DN+DED + + C
Sbjct: 235 LTSPTCLPGELVCD-NGLCLSHTLVCDNYDDCG-----DNSDEDPTLCNSPYTCLPDDFV 288
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
CA + C+P NW CD+ DC DN+DE D ++ C P++ C +S C+ L
Sbjct: 289 CA-NNLCMPLNWACDDYDDCG-----DNSDE--DAAICNSPSTCFPDDFVCANS-VCLPL 339
Query: 357 SKFCDGKPDCSNGEDE-GPFCNNKADC 382
+ CD DC + DE CN + C
Sbjct: 340 NWVCDNYDDCGDNSDEDDAICNPSSTC 366
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 96/237 (40%), Gaps = 59/237 (24%)
Query: 191 CSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ------ 244
C D P + C PG+F C G C+P + C+ + DC ++ ++P C ++
Sbjct: 102 CPRRGDRRPPTSPTCLPGEFVCDNGLCLPHTLVCNNYDDCGDNSDEDPAICNYRDSCLTD 161
Query: 245 -----------------CFNG--QVQCALSKK-------------CIPHNWLCDEEMDCS 272
CF G C + C+P NW+CD+ DC
Sbjct: 162 PCQHGVCTAIVHGYTCDCFLGFTGTNCDTAPSTCLPYDFVCSNSLCLPLNWVCDDYDDCG 221
Query: 273 TDDIVDNTDEDWD------KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DN+DED C G++ C + C+ H +CD DC DN+D
Sbjct: 222 -----DNSDEDAAICNSPLTSPTCLPGELVCD-NGLCLSHTLVCDNYDDCG-----DNSD 270
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNNKADC 382
E D ++ C P++ C ++N C+ L+ CD DC + DE CN+ + C
Sbjct: 271 E--DPTLCNSPYTCLPDDFVC-ANNLCMPLNWACDDYDDCGDNSDEDAAICNSPSTC 324
>gi|344293210|ref|XP_003418317.1| PREDICTED: LOW QUALITY PROTEIN: sortilin-related receptor-like
[Loxodonta africana]
Length = 2175
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1083 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCETHQCRSDEYNCSSGMCIRSSWVCDGD 1142
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD +MDC D +DED
Sbjct: 1143 NDC-RDWSDEANCTAVYHTCEASNFQCH-NGHCIPQRWACDGDMDCQ-----DGSDEDPV 1195
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C CIP + CD DCS D +DE H LC +
Sbjct: 1196 NCEKKCNG-FRCP-DGVCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1242
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1243 FVCKNRQQCLFHSMVCDGIVQCRDGSDE 1270
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 94/224 (41%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P +F C G CIP WKCD DC
Sbjct: 1299 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFRFQCENGHCIPNRWKCDQENDC-G 1357
Query: 233 DGSDE-----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE P C +C+ S C+ +W+CD DC+ D +D
Sbjct: 1358 DWSDEKDCGDSHILPSPTPGPTTCLPNYYRCS-SGACVMDSWVCDGYRDCA-----DGSD 1411
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ + +C + +C KKCIP+ CD DC D DE
Sbjct: 1412 EEACPSPANVTATSTTTQLGRCDRFEFECRQPKKCIPNWKRCDGHQDCQ-----DGQDEA 1466
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E RC C+ LS+ CDG DCS+G DE
Sbjct: 1467 --NCPTHSTLTCTGREFRCEDGETCIVLSERCDGFLDCSDGSDE 1508
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+H+ + C E RC C+ LS+ CDG DCS+G DE
Sbjct: 1470 THSTLTCTGREFRCEDGETCIVLSERCDGFLDCSDGSDE 1508
>gi|351702346|gb|EHB05265.1| Sortilin-related receptor, partial [Heterocephalus glaber]
Length = 2173
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1122 TQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1181
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1182 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1234
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1235 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTRFMD 1281
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1282 FVCKNRQQCLFHSMVCDGIIQCRDGSDEDP 1311
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 96/227 (42%), Gaps = 49/227 (21%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDC-- 230
C++L CDG DC + DE N P QF C G CIP WKCDG DC
Sbjct: 1338 CISLIWKCDGMDDCGDYSDEANCENPTEVPNCSRYFQFRCENGHCIPNRWKCDGENDCGD 1397
Query: 231 ------------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
L + P+TC+ F +C+ + C+ W+CD DC+ D
Sbjct: 1398 WSEEKDCGDSNLLPSPTPGPSTCLPNYF----RCS-TGACVMDTWVCDGYRDCA-----D 1447
Query: 279 NTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
+DE+ + +C + +C KKCIP+ CD DC D
Sbjct: 1448 GSDEEACPSLANVTAPSTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DGQ 1502
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+++ C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1503 DEA--NCPTHSSLTCMSREFKCEDGEACIVLSERCDGFLDCSDESDE 1547
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 137/334 (41%), Gaps = 67/334 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ G+ RS ++ N+ P ++ + N+ +YW D S L+ + + GS +L
Sbjct: 944 IERITFSGQQRS-VILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYSGSQMEILAS 1000
Query: 167 P----------NELRCGSSNQCVA-------LSKFCDGKP-------------------D 190
+ + SN CV L K +GK D
Sbjct: 1001 QLTGLMDMKIFYKGKNTGSNACVPSPCNLLCLPKANNGKSCRCPEGVASSVLPSGDLMCD 1060
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G + + C E C Q+ C G CI W CD DC D SDE N C
Sbjct: 1061 CPQGYQLKNNTCVKEENTCLRSQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICD 1119
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 1120 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDERHCEMHQCRSDEYNCS-SGMCIR 1173
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 1174 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGD 1222
Query: 364 PDCSNGEDEGPFCNNKADCENLKCSH-KCSPTPR 396
DC +G DE P N + C +C + C P+ +
Sbjct: 1223 TDCQDGSDEDP-VNCEKKCNGFRCPNGTCIPSSK 1255
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 95/233 (40%), Gaps = 42/233 (18%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC---------NAECTPGQFSCGMGKCIPESW 222
C + QC+ S CDG C +G DE P + C F C G CI W
Sbjct: 1284 CKNRQQCLFHSMVCDGIIQCRDGSDEDPAFAGCSHDPEFHKVCDAFGFQCQNGVCISLIW 1343
Query: 223 KCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPHNWLCD---------EE 268
KCDG DC D SDE N T + C Q +C + CIP+ W CD EE
Sbjct: 1344 KCDGMDDC-GDYSDEANCENPTEVPNCSRYFQFRCE-NGHCIPNRWKCDGENDCGDWSEE 1401
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC +++ + C +C+ + C+ W+CD DC+ D +DE+
Sbjct: 1402 KDCGDSNLLPSPTPGPST---CLPNYFRCS-TGACVMDTWVCDGYRDCA-----DGSDEE 1452
Query: 329 WDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCSNGEDEG 373
++ P +L C +C+ K CDG DC +G+DE
Sbjct: 1453 ACPSLANVTAPSTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEA 1505
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 72/170 (42%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S+ D G + GP + C P F C G C+ ++W
Sbjct: 1382 CIPNRWKCDGENDCGDWSEEKDCGDSNLLPSPTPGP---STCLPNYFRCSTGACVMDTWV 1438
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T + +C + +C KKCIP+ CD D
Sbjct: 1439 CDGYRDC-ADGSDEEACPSLANVTAPSTPTQLGRCDRFEFECHQPKKCIPNWKRCDGHQD 1497
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1498 CQ-----DGQDEANCPTHSSLTCMSREFKCEDGEACIVLSERCDGFLDCS 1542
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 115/287 (40%), Gaps = 52/287 (18%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G + LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 899 LKPGIYRSNMDGSSAHRLVSEDVKWPNGISVD--DQWIYWTDAYLDCIERITFSGQQRSV 956
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S E Q +
Sbjct: 957 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQ---------MEILASQLTG 1004
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-QC--ALSKKCIPHNWLCDEEM 269
M I K G C+ + C+ + NG+ +C ++ +P D
Sbjct: 1005 LMDMKIFYKGKNTGSNACVPSPCNL--LCLPKANNGKSCRCPEGVASSVLPSG---DLMC 1059
Query: 270 DCSTDDIVDN---TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
DC + N E+ + C Q +C+ + CI W CD + DC D +D
Sbjct: 1060 DCPQGYQLKNNTCVKEE----NTCLRSQYRCS-NGNCINSIWWCDFDNDCG-----DMSD 1109
Query: 327 EDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1110 ER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1151
>gi|344282799|ref|XP_003413160.1| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein-like [Loxodonta
africana]
Length = 4414
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 24/132 (18%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GSH A CH S C+ CDG+ DC +G DE GP C P +F+CG
Sbjct: 368 GSHEAA-CH--------SGHCIPKDYLCDGQEDCKDGSDELDCGP--TPPCEPNEFACGN 416
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C + +C + CIP ++ CDEE D
Sbjct: 417 GHCAFKLWRCDGDFDC-EDRTDEANCPAKRPEDVCGPTEFRCVSTNTCIPASFHCDEESD 475
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 476 CP-----DRSDE 482
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 65/218 (29%), Positives = 88/218 (40%), Gaps = 29/218 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C E C S N+CVAL CD +PDC + DE + P PE+
Sbjct: 284 CTEAEFACHSHNECVALEYRCDRRPDCRDMSDELNCEELVPSSVLPSLVETPPLPPQPEA 343
Query: 222 WKCDGFVDCL------EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
D L ++G+ P C + + C S CIP ++LCD + DC
Sbjct: 344 SIVQRPPDILAPQPLPDEGTPGP------CGSHEAACH-SGHCIPKDYLCDGQEDCK--- 393
Query: 276 IVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 394 --DGSDELDCGPTPPCEPNEFACG-NGHCAFKLWRCDGDFDCE-----DRTDEA-NCPAK 444
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P E RC S+N C+ S CD + DC + DE
Sbjct: 445 RPEDVCGPTEFRCVSTNTCIPASFHCDEESDCPDRSDE 482
>gi|46561850|gb|AAT01142.1| proteoliaisin [Lytechinus variegatus]
Length = 1935
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 134/351 (38%), Gaps = 60/351 (17%)
Query: 57 TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGE 116
T A F R L +N S +LR + D + S + +I L
Sbjct: 24 TRARRFLRRGTPL-----ENKRSTKLRVLRHLDNVRSANFSEFQITTRQGSLSPKPPAYP 78
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSN 176
+ P ++ Q + I Q CD L + + S + C + RC S
Sbjct: 79 FQCP--PRSFQCENGKCIPSRQ----VCDGRLYDCQGGEDERSCSLSTCPSDMTRC-QSG 131
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ CD DCSNGEDE C QF C G CI W CDG +DC DG D
Sbjct: 132 ECIPNYWLCDLIEDCSNGEDELGCSRKRCDNDQFRCTTGSCIATEWVCDGHIDC-HDGED 190
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVD--------- 278
E + C GQ +C + C+ + ++CD EE +C +I
Sbjct: 191 EQACLVKTCPLGQFKCN-NDACVDNQYVCDGIHDCYFGEEERNCGGLNINKPCEGRYQCD 249
Query: 279 -----------------NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+ ED C G+ QC KC+P + CD E DC
Sbjct: 250 DGRCIQPESVCDGSYDCTSGEDEQDCFSCRIGEFQCP-EGKCLPRSARCDFEQDCR---- 304
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE+ + AV P + C S +C+ S C+G+ +CS GEDE
Sbjct: 305 -DGEDEE-----NCVAVAACPGKFECPSDGRCLEFSLVCNGRKECSGGEDE 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 161 NAVLCHPNELRCGSSN--QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGK 216
++ C NE+RC N +CV ++ CDG DC +G DE P G F C G+
Sbjct: 354 SSPTCRHNEIRCSDGNGLRCVVETRICDGTKDCLDGTDEMNCPVDEPGSCGGDFRCNDGE 413
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
CI S CD F+DC G DE + + QC G QC + C+P + CD +DC+T +
Sbjct: 414 CISRSQICDRFIDCSH-GEDEDDCVMTQC-GGGFQC-IDGTCVPASRTCDGNIDCATGE- 469
Query: 277 VDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS- 334
++ + QC + ++ S +C+P CD +DC D DE+
Sbjct: 470 ---DEQSCRELPQCDVDEDLKMCSSGQCVPGEAFCDGWVDC-----YDAVDEEGCPELPS 521
Query: 335 -HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C ++ C+ S+ CDG DC +G DE
Sbjct: 522 CRGFFFCR--------TDYCLDSSRVCDGNLDCIDGRDE 552
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDG 226
N+ +C +S +C+ L+ CDGKPDC +GEDE G C +F C G C+ + C+G
Sbjct: 1615 NQFKC-NSGECIPLAAKCDGKPDCYSGEDEDGCPVIDNCPSPRFLCDDGICVSQDKICNG 1673
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC G ++ +C C QC+ + CIP + +CD DC D DE +
Sbjct: 1674 VRDCY--GGEDETSCSTVC---GFQCS-TGNCIPSSAICDGVRDC-----YDGEDESTRQ 1722
Query: 287 --FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
F NG +C CI + +CD+ DC D +DE + +C P +
Sbjct: 1723 CPFTNLCNG-FRCG-DGTCIDSSKICDDYKDCP-----DRSDE----QNCESEEVC-PGK 1770
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C+ L CDG+ DCSNG DE
Sbjct: 1771 FDC-QTGFCIELRYICDGRQDCSNGIDE 1797
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 102/251 (40%), Gaps = 69/251 (27%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ S C+G+ DCS GEDE + C+ G F C G+C+ + CDG+ DC + +E
Sbjct: 718 CIPDSAICNGQRDCSRGEDEVECPDDRCSSG-FRCRNGRCVDSNRVCDGYNDCGDSSDEE 776
Query: 238 PNTCIHQCFN---------------------------GQVQCALSKKCIPHNWLCD---- 266
C + GQ QC +CIPH+++CD
Sbjct: 777 RYNCGADRYEDDTNEVYTQGYYTTTRYSQSYEDYGCPGQFQC-RDGRCIPHSYVCDAHRH 835
Query: 267 -----EEMDCSTDDIVD-----------NTDEDWDKFHQCFNGQVQ--CAL-------SK 301
+E +C DI D + D C+ G+ + C L ++
Sbjct: 836 CTGGEDEENCPVQDICDGQFRCQEGTCISNAALCDGRRNCYGGEDERNCNLICEFQCNTE 895
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
CIP +CD DC N DE+ N+ +C +S +C+ L CD
Sbjct: 896 NCIPRIAVCDGVRDC-----YGNEDEEGCPVVDRCL-----NQFKC-NSGECIPLIAKCD 944
Query: 362 GKPDCSNGEDE 372
GKPDC +GEDE
Sbjct: 945 GKPDCYSGEDE 955
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 88/205 (42%), Gaps = 26/205 (12%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N RCG C+ S+ CD DC + DE + E PG+F C G CI + CDG
Sbjct: 1386 NGFRCGDGT-CIDSSQVCDDYKDCPDRSDEQNCESDEVCPGKFDCQTGFCIELRYVCDGR 1444
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
DC +G DE + I++ + + CI + CD DCS + + E
Sbjct: 1445 RDC-SNGLDENSCPINEGCDSDEFTCYNGHCIDDDKHCDGIPDCSAGEDETDCPEGCGSQ 1503
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
+C G CIP ++C+ DC+ + DN D+ E C
Sbjct: 1504 FECNRG--------NCIPRTYVCNGRSDCTDGEDEDNCDQ---------------CEFAC 1540
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C+ +S+ CD DCS GEDE
Sbjct: 1541 -NDGRCIEISRICDNSRDCSQGEDE 1564
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 111/256 (43%), Gaps = 29/256 (11%)
Query: 120 PLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCV 179
P+V +N S Y + CD + + +G C N+ +C S +C+
Sbjct: 1224 PIVDENCPGEFSCPPGYCIPRIAVCDGVRDCYGNEDEEGCPIVDRCL-NQFKC-DSGECI 1281
Query: 180 ALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238
L CD KPDC NGEDE G C +F C G C+ + C+G DC G ++
Sbjct: 1282 PLLAKCDRKPDCYNGEDEDGCPVIDNCPSPRFLCDDGICVSQDKICNGVRDCY--GGEDE 1339
Query: 239 NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--FHQCFNGQVQ 296
+C C QC+ + CIP + +CD DC D DE + F NG +
Sbjct: 1340 RSCNTVC---GFQCS-TGNCIPSSAICDGVRDC-----YDGEDESTRQCPFMNLCNG-FR 1389
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C CI + +CD+ DC D +DE + + V P + C + C+ L
Sbjct: 1390 CG-DGTCIDSSQVCDDYKDCP-----DRSDE---QNCESDEVC--PGKFDC-QTGFCIEL 1437
Query: 357 SKFCDGKPDCSNGEDE 372
CDG+ DCSNG DE
Sbjct: 1438 RYVCDGRRDCSNGLDE 1453
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 157/436 (36%), Gaps = 100/436 (22%)
Query: 8 GQVQCALSKKCIPHNWLCD---------EEMDCSTDDIVDNT---DEDWDKYFKRILNGT 55
GQ QC +CIPH+++CD +E +C DI D E + +G
Sbjct: 814 GQFQC-RDGRCIPHSYVCDAHRHCTGGEDEENCPVQDICDGQFRCQEGTCISNAALCDGR 872
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER-LEKAGMH 114
+ RN +L Q N + R A + + + + E P+ +R L + +
Sbjct: 873 RNCYGGEDERNCNLICEFQCNTENCIPRIAVCDGVRDCYGNEDEEGCPVVDRCLNQFKCN 932
Query: 115 GENRSPLVTKNIQWPSSL---------VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
PL+ K P VID + CD + + +G + C
Sbjct: 933 SGECIPLIAKCDGKPDCYSGEDEDGCPVIDNCPSPRFLCDDGVCVSQDKICNGVRD---C 989
Query: 166 HPNE------LRCG---SSNQCVALSKFCDGKPDCSNGEDEG----PFCNA--------- 203
+ E CG S+ C+ S CDG DC +GEDE PF N
Sbjct: 990 YGGEDERSCSTVCGFQCSTGNCIPSSAICDGVRDCYDGEDESTRQCPFTNLCNGFRCGDG 1049
Query: 204 ---------------------------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
E PG+F C G CI + CDG DC +G D
Sbjct: 1050 TCIDSSQVCDDYKDCPDRSDEQNCESDEVCPGKFDCQTGFCIELRYVCDGRRDC-SNGLD 1108
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
E + I++ + + CI + CD DCS + + +C G
Sbjct: 1109 ENSCPINEGCDSDEFTCYNGHCIDDDKRCDGIPDCSAGEDETDCPVGCGSQFECNRG--- 1165
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
CIP ++C+ DC+ + DN D+ E C + +C+ +
Sbjct: 1166 -----NCIPRTYVCNGRSDCTDGEDEDNCDQ---------------CEFAC-NDGRCIEI 1204
Query: 357 SKFCDGKPDCSNGEDE 372
S+ CD DCS GEDE
Sbjct: 1205 SRICDNIQDCSQGEDE 1220
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N RCG C+ SK CD DC + DE + E PG+F C G CI + CDG
Sbjct: 1730 NGFRCGDGT-CIDSSKICDDYKDCPDRSDEQNCESEEVCPGKFDCQTGFCIELRYICDGR 1788
Query: 228 VDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC +G DE + I++ C +GQ C + CI CD DC + N DE
Sbjct: 1789 QDC-SNGIDENSCPINEGCNSGQFTC-YNGHCIDSERTCDGIPDCPS-----NEDEASCP 1841
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
Q GQ +C + +CIP C+ DD DE+ + C +E R
Sbjct: 1842 VAQDCQGQFRC-RNGECIPLGNRCN-----GRDDCYLGEDEE-----ACPITGCRSDEFR 1890
Query: 347 CGSSNQCVALSKFCDG-KPDCSNGEDE 372
C QC++ CDG DCS+GEDE
Sbjct: 1891 C-LDGQCISGDFRCDGFYEDCSHGEDE 1916
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC + +C++ S+ CD DCS+GEDE +C G F C G C+P S CDG
Sbjct: 405 GDFRC-NDGECISRSQICDRFIDCSHGEDEDDCVMTQCG-GGFQCIDGTCVPASRTCDGN 462
Query: 228 VDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+DC ++ + QC + ++ S +C+P CD +DC D VD +E +
Sbjct: 463 IDCATGEDEQSCRELPQCDVDEDLKMCSSGQCVPGEAFCDGWVDCY--DAVD--EEGCPE 518
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
C G C + C+ + +CD +DC +D DE F +
Sbjct: 519 LPSC-RGFFFC-RTDYCLDSSRVCDGNLDC-----IDGRDETELSCFIGSDCA---EGFE 568
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDE 372
C + C +S CDG DCS EDE
Sbjct: 569 C-NDGTCTDISSVCDGARDCSEAEDE 593
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+ C+ CDG+ +C G+DE C EC+ F C G C+ CDG DC
Sbjct: 642 TDGSCIPTRNVCDGQRNCPRGDDETD-CPVECS--GFKCTDGTCLDPQNVCDGRRDCSR- 697
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDKFHQCFN 292
D+ N C C + + L CIP + +C+ + DCS +D V+ D+ +C N
Sbjct: 698 -GDDENNCPATCNGFECRDGL---CIPDSAICNGQRDCSRGEDEVECPDDRCSSGFRCRN 753
Query: 293 GQVQCALSKKCIPHNWLCD-----------EEMDCSTDDIVDNTDEDWDKYF-------- 333
G +C+ N +CD E +C D D+T+E + + +
Sbjct: 754 G--------RCVDSNRVCDGYNDCGDSSDEERYNCGADRYEDDTNEVYTQGYYTTTRYSQ 805
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
S+ C P + +C +C+ S CD C+ GEDE
Sbjct: 806 SYEDYGC-PGQFQC-RDGRCIPHSYVCDAHRHCTGGEDE 842
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 31/200 (15%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+ C+ S C+G DC+ GEDE C ECT F+C G CIP CDG +C
Sbjct: 606 TDGTCIPFSSLCNGDTDCAAGEDE-LDCPEECT--GFTCTDGSCIPTRNVCDGQRNCPR- 661
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
D+ C +C + C+ +CD DCS D +N + F +C +G
Sbjct: 662 -GDDETDCPVECSGFKC---TDGTCLDPQNVCDGRRDCSRGDDENNCPATCNGF-ECRDG 716
Query: 294 QVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
CIP + +C+ + DCS +D V+ D+ F RC + +
Sbjct: 717 L--------CIPDSAICNGQRDCSRGEDEVECPDDRCSSGF------------RC-RNGR 755
Query: 353 CVALSKFCDGKPDCSNGEDE 372
CV ++ CDG DC + DE
Sbjct: 756 CVDSNRVCDGYNDCGDSSDE 775
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 87/209 (41%), Gaps = 29/209 (13%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
P + +C +C+ S CD C+ GEDE + GQF C G CI + CDG
Sbjct: 813 PGQFQC-RDGRCIPHSYVCDAHRHCTGGEDEENCPVQDICDGQFRCQEGTCISNAALCDG 871
Query: 227 FVDCLEDGSDEPN---TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+C G DE N C QC ++ CIP +CD DC ++ +E
Sbjct: 872 RRNCY-GGEDERNCNLICEFQCN--------TENCIPRIAVCDGVRDCYGNE----DEEG 918
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+C N Q +C S +CIP CD + DC + DED + C
Sbjct: 919 CPVVDRCLN-QFKCN-SGECIPLIAKCDGKPDCYS-----GEDEDGCPVIDN----CPSP 967
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C CV+ K C+G DC GEDE
Sbjct: 968 RFLC-DDGVCVSQDKICNGVRDCYGGEDE 995
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 139 DILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 198
++ Y CD + + + C+ + C + C+ + CDG PDC + EDE
Sbjct: 1780 ELRYICDGRQDCSNGIDENSCPINEGCNSGQFTC-YNGHCIDSERTCDGIPDCPSNEDEA 1838
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
A+ GQF C G+CIP +C+G DC G DE I C + + +C L +C
Sbjct: 1839 SCPVAQDCQGQFRCRNGECIPLGNRCNGRDDCYL-GEDEEACPITGCRSDEFRC-LDGQC 1896
Query: 259 IPHNWLCD 266
I ++ CD
Sbjct: 1897 ISGDFRCD 1904
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 92/251 (36%), Gaps = 54/251 (21%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFV 228
+L+ SS QCV FCDG DC + DE G F C C+ S CDG +
Sbjct: 485 DLKMCSSGQCVPGEAFCDGWVDCYDAVDEEGCPELPSCRGFFFCRTDYCLDSSRVCDGNL 544
Query: 229 DCLEDGSDEPNTCIHQCFNGQVQCALS-----KKCIPHNWLCDEEMDCSTDDIVDN---- 279
DC+ DG DE CF G CA C + +CD DCS + +N
Sbjct: 545 DCI-DGRDETEL---SCFIGS-DCAEGFECNDGTCTDISSVCDGARDCSEAEDEENCLPG 599
Query: 280 ------TDEDWDKFHQCFNGQVQCALSK-----------------KCIPHNWLCDEEMDC 316
TD F NG CA + CIP +CD + +C
Sbjct: 600 CTAFECTDGTCIPFSSLCNGDTDCAAGEDELDCPEECTGFTCTDGSCIPTRNVCDGQRNC 659
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D++ D + C + C+ CDG+ DCS G+DE
Sbjct: 660 P------RGDDETDCPVECSGFKC--------TDGTCLDPQNVCDGRRDCSRGDDEN--- 702
Query: 377 NNKADCENLKC 387
N A C +C
Sbjct: 703 NCPATCNGFEC 713
>gi|431891298|gb|ELK02175.1| Basement membrane-specific heparan sulfate proteoglycan core
protein [Pteropus alecto]
Length = 4313
Score = 81.6 bits (200), Expect = 9e-13, Method: Composition-based stats.
Identities = 63/210 (30%), Positives = 88/210 (41%), Gaps = 33/210 (15%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C E C S N+CVAL CD +PDC + DE +CG G C+ S
Sbjct: 159 VCTDTEFACHSHNECVALEYRCDRRPDCRDMSDE------------LNCGEGGCLRHS-- 204
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
G + C + C S CIP +++CD + DC D +DE
Sbjct: 205 -----GLQTPGGGSGPGGLVPCGPHEATCR-SGHCIPKDYVCDGQEDCK-----DGSDEL 253
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D C + C + C+ W CD + DC D+TDE D +C P
Sbjct: 254 DCGPAPPCEPNEFPCG-NGHCVLKLWRCDGDSDCE-----DHTDEA-DCPAKRPEDVCGP 306
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ RC S+N C++ S CD + DC + DE
Sbjct: 307 TQFRCVSTNTCISASFHCDEESDCPDRSDE 336
Score = 80.9 bits (198), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/127 (37%), Positives = 64/127 (50%), Gaps = 16/127 (12%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIP 219
V C P+E C S C+ CDG+ DC +G DE GP C P +F CG G C+
Sbjct: 219 VPCGPHEATC-RSGHCIPKDYVCDGQEDCKDGSDELDCGP--APPCEPNEFPCGNGHCVL 275
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
+ W+CDG DC ED +DE + + C Q +C + CI ++ CDEE DC
Sbjct: 276 KLWRCDGDSDC-EDHTDEADCPAKRPEDVCGPTQFRCVSTNTCISASFHCDEESDCP--- 331
Query: 276 IVDNTDE 282
D +DE
Sbjct: 332 --DRSDE 336
>gi|307191338|gb|EFN74947.1| Sortilin-related receptor [Camponotus floridanus]
Length = 2187
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 99/196 (50%), Gaps = 27/196 (13%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ LS CD K DCS+G DE N E G F CG G+C+ + + C+ VDC +DGSDE
Sbjct: 1971 CIPLSAKCDSKNDCSDGSDE---LNCEDCSGNFRCGSGECLKKHFVCNNIVDC-DDGSDE 2026
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + + +C+ + KCIP +W+CD C D+ DE ++ C + Q C
Sbjct: 2027 RDCENSKCQSDEFRCS-NGKCIPASWVCDGRSHCE-----DHRDE-YNCTENCQDNQYLC 2079
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLCHPNELRCGSSNQCVAL 356
K CIP W C+ DC + DE D C P++ +C + CV+
Sbjct: 2080 PTEKLCIPQTWRCNGIDDCKGGE-----DEKLCD---------CDPDQFKCQTGG-CVSS 2124
Query: 357 SKFCDGKPDCSNGEDE 372
S+ CDG +C + DE
Sbjct: 2125 SEICDGVKNCPDYSDE 2140
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
RCGS +C+ C+ DC +G DE N++C +F C GKCIP SW CDG
Sbjct: 2000 FRCGSG-ECLKKHFVCNNIVDCDDGSDERDCENSKCQSDEFRCSNGKCIPASWVCDGRSH 2058
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
C ED DE N C C + Q C K CIP W C+ DC
Sbjct: 2059 C-EDHRDEYN-CTENCQDNQYLCPTEKLCIPQTWRCNGIDDC 2098
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 238 PNTCIHQCFNGQVQCALSKK-----CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
P T + +C Q QCA CIP + CD + DCS D +DE C +
Sbjct: 1946 PTTILSKCITSQFQCANGTSRNGAYCIPLSAKCDSKNDCS-----DGSDE-----LNCED 1995
Query: 293 --GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS 350
G +C S +C+ +++C+ +DC DD D D + K C +E RC S+
Sbjct: 1996 CSGNFRCG-SGECLKKHFVCNNIVDC--DDGSDERDCENSK--------CQSDEFRC-SN 2043
Query: 351 NQCVALSKFCDGKPDCSNGEDE 372
+C+ S CDG+ C + DE
Sbjct: 2044 GKCIPASWVCDGRSHCEDHRDE 2065
>gi|345794055|ref|XP_535371.3| PREDICTED: LOW QUALITY PROTEIN: basement membrane-specific heparan
sulfate proteoglycan core protein [Canis lupus
familiaris]
Length = 4431
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/125 (38%), Positives = 62/125 (49%), Gaps = 16/125 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGMGKCIPES 221
C P+E C S C+ CDG+ DC +G DE GP C P +F CG G C +
Sbjct: 330 CGPHEATC-HSGHCIPKDYICDGQEDCKDGSDELDCGP--TPPCEPNEFPCGNGHCALKL 386
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
W CDG DC ED +DE + + C Q +C + CIP ++ CDEE DC
Sbjct: 387 WHCDGDFDC-EDRTDEVDCPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCP----- 440
Query: 278 DNTDE 282
D +DE
Sbjct: 441 DRSDE 445
Score = 68.6 bits (166), Expect = 7e-09, Method: Composition-based stats.
Identities = 63/222 (28%), Positives = 85/222 (38%), Gaps = 26/222 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKC 217
A +C E C S N+CVAL CD +PDC + DE P P
Sbjct: 239 ARVCTEAEFACHSHNECVALEYRCDRRPDCRDMSDELNCEEPVPELSSIPPALVETPPPP 298
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQ------CFNGQVQCALSKKCIPHNWLCDEEMDC 271
+ + GS P + C + C S CIP +++CD + DC
Sbjct: 299 VEPQPEATTTRQL--PGSPTPQLLLPSPSRPLPCGPHEATCH-SGHCIPKDYICDGQEDC 355
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE D
Sbjct: 356 K-----DGSDELDCGPTPPCEPNEFPCG-NGHCALKLWHCDGDFDCE-----DRTDE-VD 403
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 404 CPAKRPEDVCGPTQFRCVSTNTCIPASFHCDEESDCPDRSDE 445
>gi|130502114|ref|NP_001076133.1| sortilin-related receptor precursor [Oryctolagus cuniculus]
gi|8928392|sp|Q95209.1|SORL_RABIT RecName: Full=Sortilin-related receptor; AltName: Full=Low-density
lipoprotein receptor relative with 11 ligand-binding
repeats; Short=LDLR relative with 11 ligand-binding
repeats; Short=LR11; AltName: Full=SorLA-1; AltName:
Full=Sorting protein-related receptor containing LDLR
class A repeats; Short=SorLA; Flags: Precursor
gi|1665753|dbj|BAA13075.1| LR11 [Oryctolagus cuniculus]
Length = 2213
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1120 TQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1179
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1180 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDADCQ-----DGSDEDPA 1232
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP CD DCS D +DE H LC +
Sbjct: 1233 NCEKKCNG-FRCP-NGTCIPSTKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1279
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1280 FVCKNRQQCLFHSMVCDGIIQCRDGSDEDP 1309
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1077 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDEKNCPTTICDLDTQFRCQESGTCIPLSY 1135
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1136 KCDLEDDCG-----DNSDERHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1182
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1183 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDADCQDGSDEDP-ANCEKK 1237
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1238 CNGFRCPNGTCIPSTK 1253
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 95/231 (41%), Gaps = 57/231 (24%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1336 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCDNGHCIPNRWKCDRENDC-G 1394
Query: 233 DGSDE---------------PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D SDE P+TC+ ++C G C+ W+CD DC+
Sbjct: 1395 DWSDEKDCGDSHVLPSTTPAPSTCLPNYYRCGGG--------ACVIDTWVCDGYRDCA-- 1444
Query: 275 DIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
D +DE+ + +C + +C KKCIP+ CD DC
Sbjct: 1445 ---DGSDEEACPSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQDCQ---- 1497
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1498 -DGQDEA--NCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCSDESDE 1545
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G P + C P + CG G C+ ++W
Sbjct: 1380 CIPNRWKCDRENDCGDWSDEKDCGDSHVLPSTTPAP---STCLPNYYRCGGGACVIDTWV 1436
Query: 224 CDGFVDCLEDGSDE------PNTCIH-------QCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE PN +C + +C KKCIP+ CD D
Sbjct: 1437 CDGYRDC-ADGSDEEACPSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQD 1495
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1496 CQ-----DGQDEANCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCS 1540
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ + CDG DC +G+DE C +F C G+ CI
Sbjct: 1470 CDRFEFECHQPKKCIPNWRRCDGHQDCQDGQDEANCPTHSTLTCMSWEFKCEDGEACIVL 1529
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1530 SERCDGFLDC-SDESDE 1545
>gi|242005391|ref|XP_002423552.1| predicted protein [Pediculus humanus corporis]
gi|212506681|gb|EEB10814.1| predicted protein [Pediculus humanus corporis]
Length = 4375
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 100/235 (42%), Gaps = 29/235 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAECTPGQFSCGMGKC 217
C P+E C C+ CDG+ DC N + + P + C P +F+C G C
Sbjct: 388 CRPDEFTC-EYGGCIDQRLLCDGQGDCPNDDSDEWSCPPSEPTESTTCRPDEFTCDYGGC 446
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
I +CDG VDC D SDE N C + +C +C+P + +CD DCS
Sbjct: 447 IDHRERCDGKVDCPNDDSDERNCVAVTCARDEFKCHDESRCVPSSRVCDGVHDCS----- 501
Query: 278 DNTDED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
D +DE+ C Q C C+ + C+ +C D +DE
Sbjct: 502 DRSDEENCQQPPPQPPVLPSCSGDQFSCG-DGMCLERDQRCNGYPECR-----DGSDE-R 554
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
D C ++ +C S+ C+ LS+ CDG PDCS+ DE + + C N
Sbjct: 555 DCPPPPPPRTCGSHQFQC-SNGMCIDLSRKCDGVPDCSDRSDEVSYTTTRPPCSN 608
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 108/235 (45%), Gaps = 35/235 (14%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCG 213
AV C +E +C ++CV S+ CDG DCS+ DE P C+ QFSCG
Sbjct: 471 AVTCARDEFKCHDESRCVPSSRVCDGVHDCSDRSDEENCQQPPPQPPVLPSCSGDQFSCG 530
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
G C+ +C+G+ +C DGSDE + C + Q QC+ + CI + CD
Sbjct: 531 DGMCLERDQRCNGYPEC-RDGSDERDCPPPPPPRTCGSHQFQCS-NGMCIDLSRKCDGVP 588
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DCS +D++ T C N + C CIP ++CD DCS D +DE
Sbjct: 589 DCSDRSDEVSYTTTRP-----PCSNSEFTCQ-DGACIPSTYVCDSVPDCS-----DRSDE 637
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ LC + +C CVA SK CDG DC +G DE C +K C
Sbjct: 638 ------INCPGLCADEDFKC-EDGSCVASSKRCDGHQDCRDGSDE-VHCESKTRC 684
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 104/254 (40%), Gaps = 53/254 (20%)
Query: 168 NELRCGS------SNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCI 218
++ RCG+ S C++L CD + DC +G DE + + C QF C G CI
Sbjct: 680 SKTRCGTKQWQCRSGFCISLKSKCDQRIDCPDGSDEKNCTDYNESSCKADQFQCNNGFCI 739
Query: 219 PESWKCDGFVDCLEDGSDEPN-----------------TCIHQCFNGQVQCALSKKCIPH 261
P + CD + DC DGSDE N C + C C+P
Sbjct: 740 PNYYLCDDYSDCT-DGSDEANCAGGGPGGAGGPGGAGGPGGVGCSEHEFTCG-DGMCVPS 797
Query: 262 NWLCD---------EEMDCSTDDIVDNTDEDW--------------DKFHQCFNGQVQCA 298
+ C+ +E DC D+ + ++ D + C +G +
Sbjct: 798 SAKCNRVHDCNDGSDEADCFPPDLRPCSHNEFTCDDGQCVERNRKCDGAYDCRDGSDEKK 857
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
S C+P+ W CD + S + DN + D N + C P+E +C + + CV+ S
Sbjct: 858 CS-YCLPNEWFCDTQGCISLNRRCDNIYDCRDFSDEQNCIGCEPHEFKCNTGD-CVSGSS 915
Query: 359 FCDGKPDCSNGEDE 372
C+G DC +G DE
Sbjct: 916 RCNGVRDCLDGSDE 929
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 157 DGSHNAVLCHPNELRCGSSN-------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS A C P +LR S N QCV ++ CDG DC +G DE + C P +
Sbjct: 809 DGSDEAD-CFPPDLRPCSHNEFTCDDGQCVERNRKCDGAYDCRDGSDEKKC--SYCLPNE 865
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
+ C CI + +CD DC D SDE N CI C + +C + C+ + C+
Sbjct: 866 WFCDTQGCISLNRRCDNIYDC-RDFSDEQN-CIG-CEPHEFKCN-TGDCVSGSSRCNGVR 921
Query: 270 DCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC +D +DE+ + C GQ C +CIP + CD C
Sbjct: 922 DC-----LDGSDEENCYPGPVTCNFGQFACHSGDQCIPQSSRCDGHYQC----------R 966
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
D+ + C P+E RC + C+ LS C+G+ DC
Sbjct: 967 DYSDELNCGEGPCKPDEFRC-ENGPCIPLSLRCNGQNDC 1004
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 81/208 (38%), Gaps = 65/208 (31%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGKCIPESWKC 224
+++RC + + CDG DC++G DE EC+ G+F C + +CIP S KC
Sbjct: 179 DKVRCPDGTAFICRDQVCDGDLDCNDGWDESNCTTSSATECSSGEFVCDVTRCIPSSKKC 238
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC D +DE + QC + +C S KCI H CD DC
Sbjct: 239 DGNYDCT-DQTDERDCEGAQCSPEEFRCR-SGKCIEHFRRCDHYRDCPDG---------- 286
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
++E DCS P+E
Sbjct: 287 --------------------------EDEYDCS-----------------------KPDE 297
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
CG + C+ ++ CDGKPDC + DE
Sbjct: 298 FTCGDGS-CIDINNKCDGKPDCYDYSDE 324
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 88/222 (39%), Gaps = 31/222 (13%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ +A C E C +C+ SK CDG DC++ DE A+C+P +F C GKCI
Sbjct: 213 TSSATECSSGEFVC-DVTRCIPSSKKCDGNYDCTDQTDERDCEGAQCSPEEFRCRSGKCI 271
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CD + DC DG DE + C CI N CD + DC D
Sbjct: 272 EHFRRCDHYRDC-PDGEDE-----YDCSKPDEFTCGDGSCIDINNKCDGKPDC-----YD 320
Query: 279 NTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN-TDEDWDKYFSH-- 335
+DE+ C + P + E+ DC ++ T+E +FS
Sbjct: 321 YSDEN-----DCHQSPTPSSPDSGSGPRGF-AREDYDCLGSLMIKKITNEKKMIFFSFYW 374
Query: 336 ---------NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 368
+ C P+E C C+ CDG+ DC N
Sbjct: 375 KKLWRERMGSYTGCRPDEFTC-EYGGCIDQRLLCDGQGDCPN 415
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 38/75 (50%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C+ + C S +QC+ S CDG C + DE C P +F C G CIP S
Sbjct: 937 VTCNFGQFACHSGDQCIPQSSRCDGHYQCRDYSDELNCGEGPCKPDEFRCENGPCIPLSL 996
Query: 223 KCDGFVDCLEDGSDE 237
+C+G DC D SDE
Sbjct: 997 RCNGQNDCPYDISDE 1011
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
+EP+T C N Q C+ + +CI +CD DC+ D +DE H C +
Sbjct: 1113 NEPSTRQPACKNHQATCS-NGECINKAQVCDGRHDCT-----DGSDELRCSLHGCEPNEF 1166
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
+C +KKC+ W CD + DC +N + +C PNE C S QC+
Sbjct: 1167 RCN-NKKCVSKAWRCDFDDDCGDGSDEENC------HVVSPGGVCQPNEYACRSGTQCIP 1219
Query: 356 LSKFCDGKPDCSNGEDE 372
S CDG+ DC +G DE
Sbjct: 1220 KSYECDGEFDCQDGSDE 1236
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +C+ ++ CDG+ DC++G DE C P +F C KC+ ++W+CD DC +
Sbjct: 1130 SNGECINKAQVCDGRHDCTDGSDELRCSLHGCEPNEFRCNNKKCVSKAWRCDFDDDCGDG 1189
Query: 234 GSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC 290
+E + C + C +CIP ++ CD E DC D +DE
Sbjct: 1190 SDEENCHVVSPGGVCQPNEYACRSGTQCIPKSYECDGEFDCQ-----DGSDES------- 1237
Query: 291 FNGQVQCALSKKCIP 305
QC+ K IP
Sbjct: 1238 -----QCSKPKVIIP 1247
>gi|432914784|ref|XP_004079119.1| PREDICTED: low-density lipoprotein receptor-related protein 8-like
[Oryzias latipes]
Length = 905
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 91/173 (52%), Gaps = 18/173 (10%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIHQ-CFNGQVQCALSK-KCIPH 261
C P +F+C G+C+P W+CDG +C DGSDE TC Q C + C S KC+
Sbjct: 90 CAPAEFACFNGQCVPGRWRCDGEPEC-PDGSDEAEETCSKQTCPPEKFDCGGSANKCVSL 148
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD E DC ++ D D D C +G+ CA ++KC+ ++C+ + DC
Sbjct: 149 SWRCDGEKDC--ENGADEEDCAADA-KACPSGEFMCA-NRKCLAAIYVCNGDDDCGDGSD 204
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+ + + C PN LRC +S +CV L CDG PDCS+G DEGP
Sbjct: 205 ---------ELKCGSPLTCGPNHLRCNTS-ECVPLMWSCDGDPDCSDGSDEGP 247
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 22/134 (16%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------------ 105
LAL++ N +++S V + + L+NS DL P +D
Sbjct: 464 LALDWLQHNLYWTDSGDKSISVVSVDGTKRRVLINS-DLSEPRAIAVDPHHGFMYWSDWG 522
Query: 106 --ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNA- 162
++EKAGM+G +R LV++NI+WP+ + +D LYW DS L+ + SV ++G+H
Sbjct: 523 TRAKIEKAGMNGVDRQVLVSENIEWPNGITLDLANRRLYWVDSKLHLIASVDLNGAHRRT 582
Query: 163 ------VLCHPNEL 170
L HP L
Sbjct: 583 HLSSADTLGHPYSL 596
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
+ QC NG+ CI + +CD DC D +DE K+ + L
Sbjct: 347 LKFQCKNGE--------CIESSRVCDSVKDCK-----DRSDEP-----KKECGKSPYLLF 388
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE---RLEKAGMHGEN 117
H + + +++ V AQ N + D+ +F D ++ A +H N
Sbjct: 389 TNRHEIRRIDLVKRDYSQVVS---AQRNAVALDLDVANNRVFWCDRFHRKIYSAFIHEAN 445
Query: 118 ----RSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ PLV ++Q P L +D+ Q LYW DS ++ V VDG+ VL
Sbjct: 446 DPSQQVPLVDSSLQTPVGLALDWLQHNLYWTDSGDKSISVVSVDGTKRRVL 496
>gi|326681199|ref|XP_002662283.2| PREDICTED: low-density lipoprotein receptor-like [Danio rerio]
Length = 560
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 95/198 (47%), Gaps = 18/198 (9%)
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELR 346
H C + CA S C+P CD DC D +DE + +V P+ +
Sbjct: 36 VHTCRPDEFLCADSG-CVPGLRQCDGHPDCG-----DRSDE---LDCTPVSVCDAPSRFK 86
Query: 347 CGSSNQCVALSKFCDGKPDCSNGEDEGPF--CN-NKADCENLKCSHKCSPTPRGAMCFCP 403
C SS +C++ + CDG+ DC + DE P CN N+ N CSH C G C CP
Sbjct: 87 C-SSGECISAERVCDGQRDCGDASDE-PIRDCNVNECLSSNGGCSHLCVDLRLGFECSCP 144
Query: 404 AG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE 462
AG + N T C D DEC+ +C Q C N SY C C EGY L + C A P+
Sbjct: 145 AGFRLANHTHCEDVDECVDADACSQMCVNLPGSYKCVCAEGYELDHMTRDCRAATGPE-- 202
Query: 463 PASIIFSSTVDIRRIHLN 480
A ++FS+ ++R++ L
Sbjct: 203 -AFLLFSTRHEVRKLALG 219
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 16/123 (13%)
Query: 58 LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------------ 105
LA+++ HRN +Q++VS ++ L++ L P LD
Sbjct: 280 LAVDWVHRNIYWTDSEQRSVSVATADGSKRKTLIHG--LQNPRAIVLDPQSNFMFWSDWG 337
Query: 106 --ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
R+E+ G++G +R+ LVT NI WP+ + +D LYW DS L+T+ S+ VDG+
Sbjct: 338 VSARIERCGLNGADRTALVTDNIVWPNGIALDVLGRRLYWVDSKLHTLSSIGVDGNGRHT 397
Query: 164 LCH 166
L H
Sbjct: 398 LIH 400
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNAECTPGQFSCGMGKCIP 219
C P+E C S CV + CDG PDC + DE C+A P +F C G+CI
Sbjct: 39 CRPDEFLCADSG-CVPGLRQCDGHPDCGDRSDELDCTPVSVCDA---PSRFKCSSGECIS 94
Query: 220 ESWKCDGFVDCLEDGSDEP 238
CDG DC D SDEP
Sbjct: 95 AERVCDGQRDC-GDASDEP 112
>gi|449662253|ref|XP_004205503.1| PREDICTED: uncharacterized protein LOC101239179 [Hydra
magnipapillata]
Length = 1771
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 104/434 (23%), Positives = 152/434 (35%), Gaps = 82/434 (18%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFK------------ 49
+ C N + C+ KCIP++WLCD E DC + F+
Sbjct: 1004 VRNCLNDEFMCS-DHKCIPNDWLCDGERDCYDAGDERTCEAKKPSCFQPVGVSLSSVIPE 1062
Query: 50 -------------RILNGTHTLALEFNHRNQSLC------------------FIQQQNVS 78
R NG LA F + C +I +
Sbjct: 1063 SHFSASSSRGSPYRPSNGRFNLASHFTVSAGAWCAEEHKPPHWLQIDLGKDFYISHIGIQ 1122
Query: 79 SVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ 138
L + L + + + G NR P+ + ++ ++ + +
Sbjct: 1123 GRHLVLQFVQSFLLKYSMNGYTWDTYSYHGQVRVFQG-NRDPIYAQTVKLEHKVLARFTR 1181
Query: 139 DI-------------LYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFC 185
+ LY C T + + A C E +C + N C+ C
Sbjct: 1182 IVIEKYMQQPCMRIELYGCSFSQATTPVTTTEINTKAPTCR--EFKCSNGN-CIVNRWVC 1238
Query: 186 DGKPDCSNGEDEG-PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DGK DC +G DE CN C+ +F C G C+ CDG DC D SDE N
Sbjct: 1239 DGKKDCLDGLDESQATCNQVCSNDEFQCQSGYCLSTEHVCDGDTDCF-DESDEKNCTEKV 1297
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV------QCA 298
C Q +C + KC+ ++CD E DC T D N + +F + +C
Sbjct: 1298 C--DQFKCP-NGKCVLSRYVCDGEKDCPTGDDEFNCTKTTPQFTTISTQTMPWCNGFRCF 1354
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSK 358
+ CIP + CD DC + D T DK+ LC N G C+
Sbjct: 1355 KTNLCIPFEYKCDGYKDCRFGE--DETCCTSDKF------LCPSNSD--GYFGNCIPKRT 1404
Query: 359 FCDGKPDCSNGEDE 372
CDG DC++G DE
Sbjct: 1405 LCDGYQDCADGFDE 1418
>gi|194768835|ref|XP_001966517.1| GF21948 [Drosophila ananassae]
gi|190617281|gb|EDV32805.1| GF21948 [Drosophila ananassae]
Length = 4242
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E +C +C+++S+ CDG+ DC+ G+DE C+ C ++ C G CI + C
Sbjct: 143 CSAMEYQCSDGTRCISVSQTCDGRIDCTGGDDE-EHCDGTCLYDKWQCDDGTCIAKELLC 201
Query: 225 DGFVDCLEDGSDE-----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
+G +DC ED SDE + QC N QC S +CIP +CD DC+ DN
Sbjct: 202 NGNIDCPEDISDERYCDGGDNYDGQCRNNDFQCN-SGECIPMRQVCDNIYDCN-----DN 255
Query: 280 TDEDWDKFHQCFNGQV-QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+DE +G+V + + P NW+ E+ D I NT Y NA
Sbjct: 256 SDE----LACAQSGEVDRVGIPIARPPSNWIHVED---EGDYIPQNT------YHKANAK 302
Query: 339 -LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P++ RC ++N C+ L CD C++ DE
Sbjct: 303 NPCQPDQFRCTTTNVCIPLHLRCDNSYHCNDLSDE 337
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 91/200 (45%), Gaps = 25/200 (12%)
Query: 183 KFCDGKPDCSNGEDEGPFCN--------AECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
KF D + + E+ G F + EC +F C G+CI E +CD VDC DG
Sbjct: 74 KFLDQLTNFNRIENLGAFADENFAFEDVQECASNEFRCNNGQCIDERRRCDYKVDC-PDG 132
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFN 292
DE C C + QC+ +CI + CD +DC+ D ++ D +DK+ QC +
Sbjct: 133 EDESEDCPTACSAMEYQCSDGTRCISVSQTCDGRIDCTGGDDEEHCDGTCLYDKW-QCDD 191
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
G CI LC+ +DC D + + D Y C N+ +C +S +
Sbjct: 192 G--------TCIAKELLCNGNIDCPEDISDERYCDGGDNYDGQ----CRNNDFQC-NSGE 238
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ + + CD DC++ DE
Sbjct: 239 CIPMRQVCDNIYDCNDNSDE 258
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 57/112 (50%), Gaps = 12/112 (10%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C+ + CDG PDCS+G DE + +C P QF C KC+ +W+CDG DC D
Sbjct: 1034 GECIDKTGICDGTPDCSDGSDEQSCSHGRKCQPNQFMCANSKCVDRTWRCDGENDC-GDN 1092
Query: 235 SDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
SDE P C + C S CIP ++ CD+ DC +D TDE
Sbjct: 1093 SDEASCDPEPSGAPCRYNEFGCR-SGHCIPKSFQCDDVNDC-----LDGTDE 1138
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 91/217 (41%), Gaps = 41/217 (18%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC-GMGKCIPESWKCDGFVDCLED 233
S +C + S+ CD + C +G DE +C +F C CI + CDG+ DC D
Sbjct: 660 SGRCYSESERCDRRNHCEDGSDEANCTGIQCKDHEFLCFDFQFCINTTQHCDGYYDC-RD 718
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFN 292
SDE N CI C + Q +C + C+P + +CD C D TDE + H+C
Sbjct: 719 FSDEQN-CIG-CASNQFRCQ-NGDCVPEHSVCDGITQCR-----DGTDELNCGGSHECLP 770
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-----------------------DW 329
Q +C S +C+ C+ DC +D++DE
Sbjct: 771 SQFRCN-SGQCVSSTARCNGRTDC-----MDSSDEYNCVPTSSPTIITTLTTTTVGTTIT 824
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
++C P RC + C++L C+G+ DC
Sbjct: 825 TPPAPPLRIICPPTAFRC-DNGPCISLGLRCNGRIDC 860
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 157 DGSHNA----VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
DGS A + C +E C C+ ++ CDG DC + DE C QF C
Sbjct: 678 DGSDEANCTGIQCKDHEFLCFDFQFCINTTQHCDGYYDCRDFSDEQNCIG--CASNQFRC 735
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
G C+PE CDG C DG+DE N H+C Q +C S +C+ C+ DC
Sbjct: 736 QNGDCVPEHSVCDGITQC-RDGTDELNCGGSHECLPSQFRCN-SGQCVSSTARCNGRTDC 793
Query: 272 STDDIVDNTDE 282
+D++DE
Sbjct: 794 -----MDSSDE 799
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCI 259
++ C+ Q +C G+CI ++ CDG DC DGSDE +C H +C Q CA S KC+
Sbjct: 1021 SSACSEYQATCMNGECIDKTGICDGTPDC-SDGSDE-QSCSHGRKCQPNQFMCANS-KCV 1077
Query: 260 PHNWLCDEEMDCSTDDIVDNTDE----DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC DN+DE C + C S CIP ++ CD+ D
Sbjct: 1078 DRTWRCDGENDCG-----DNSDEASCDPEPSGAPCRYNEFGCR-SGHCIPKSFQCDDVND 1131
Query: 316 CSTDDIVDNTDE 327
C +D TDE
Sbjct: 1132 C-----LDGTDE 1138
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-ECTPGQFSCGMGKCI 218
N + C N+ RC + CV CDG C +G DE + EC P QF C G+C+
Sbjct: 723 QNCIGCASNQFRC-QNGDCVPEHSVCDGITQCRDGTDELNCGGSHECLPSQFRCNSGQCV 781
Query: 219 PESWKCDGFVDCLEDGSDEPN 239
+ +C+G DC+ D SDE N
Sbjct: 782 SSTARCNGRTDCM-DSSDEYN 801
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 82/215 (38%), Gaps = 53/215 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA-------ECTPGQFSCGMGKC 217
C PNE +C + +C+ +C+ DC++G DE NA +CT QF C C
Sbjct: 554 CQPNEWQC-DNLECIDSRLYCNDIEDCADGSDEICLSNATNVLTPGDCTADQFFCD-ASC 611
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
+ S +C+G +DC D SDE + C + G L +P C +
Sbjct: 612 LNRSVRCNGHIDC-SDHSDEMD-CSSHSYPGSGSSHLYPVGLP----CPQ---------- 655
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
H+C +G +C + CD C ED +
Sbjct: 656 ----------HKCPSG--------RCYSESERCDRRNHC----------EDGSDEANCTG 687
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C +E C C+ ++ CDG DC + DE
Sbjct: 688 IQCKDHEFLCFDFQFCINTTQHCDGYYDCRDFSDE 722
>gi|410927518|ref|XP_003977188.1| PREDICTED: prolow-density lipoprotein receptor-related protein
1-like, partial [Takifugu rubripes]
Length = 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 84/170 (49%), Gaps = 15/170 (8%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHN 262
+C G+F+C +CI E WKCDG DCL++ + P C H C + +C + +CIP
Sbjct: 9 QCQAGEFACKNSRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPTDRFKCK-NNRCIPLR 67
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
WLCD + DC D+ NT C Q CA S +CIP +W CD + DC
Sbjct: 68 WLCDGDNDCGNDEDESNTTC---SARTCPPNQYSCA-SGRCIPISWTCDLDDDCG----- 118
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE S C P ++ +C+ ++ CD + DC +G DE
Sbjct: 119 DRSDEP----ASCAYPTCFPLTQFTCNNGRCININWRCDNEKDCGDGSDE 164
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ L CDG DC N EDE C+A C P Q+SC G+CIP SW
Sbjct: 51 CPTDRFKC-KNNRCIPLRWLCDGDNDCGNDEDESNTTCSARTCPPNQYSCASGRCIPISW 109
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
CD DC D SDEP +C + CF + +CI NW CD E DC
Sbjct: 110 TCDLDDDC-GDRSDEPASCAYPTCFPLTQFTCNNGRCININWRCDNEKDCG 159
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 71/157 (45%), Gaps = 11/157 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C E C +S +C+ CDG DC + DE P C+ C +F C +CIP W
Sbjct: 10 CQAGEFACKNS-RCIQERWKCDGDNDCLDNSDEAPELCHQHTCPTDRFKCKNNRCIPLRW 68
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC D + TC C Q CA S +CIP +W CD + DC D +D
Sbjct: 69 LCDGDNDCGNDEDESNTTCSARTCPPNQYSCA-SGRCIPISWTCDLDDDCG-----DRSD 122
Query: 282 EDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
E + CF + +CI NW CD E DC
Sbjct: 123 EPASCAYPTCFPLTQFTCNNGRCININWRCDNEKDCG 159
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSK 301
QC G+ C S+ CI W CD + DC +DN+DE + HQ C + +C +
Sbjct: 9 QCQAGEFACKNSR-CIQERWKCDGDNDC-----LDNSDEAPELCHQHTCPTDRFKCK-NN 61
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP WLCD + DC D+ NT + +A C PN+ C +S +C+ +S CD
Sbjct: 62 RCIPLRWLCDGDNDCGNDEDESNT--------TCSARTCPPNQYSC-ASGRCIPISWTCD 112
Query: 362 GKPDCSNGEDEGPFC 376
DC + DE C
Sbjct: 113 LDDDCGDRSDEPASC 127
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M GE R + T N WP+ L +DY + + W D+ + +
Sbjct: 313 WDASMP-------RIEAASMSGEGRKTIHKETGNGGWPNGLTVDYLERRILWIDARSDAI 365
Query: 152 ESVRVDGS 159
S + DGS
Sbjct: 366 YSAKYDGS 373
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 44/191 (23%)
Query: 17 KCIPHNWLCDEEMDCS--TDDI--------------------VDNTDEDWDKYFKRILNG 54
+CI NW CD E DC +D++ + D + ++ +
Sbjct: 144 RCININWRCDNEKDCGDGSDELNCPNPTDPFKPFIIFSNRHEIRRIDLNKGEFSVLVPGL 203
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWD------LPAPEIFPLD--- 105
+T+AL+F H NQS + + N L S+D L PE +D
Sbjct: 204 RNTIALDF-HLNQSALYWTDVVEDKIYRGKLSENGALTSFDVVIQYGLATPEGLAVDWIA 262
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC--DSHLNTVES 153
+++E A + G R+ L+ ++ P ++ +D IL+W D+ + +E+
Sbjct: 263 GNIYWVESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDPRDGILFWTDWDASMPRIEA 322
Query: 154 VRVDGSHNAVL 164
+ G +
Sbjct: 323 ASMSGEGRKTI 333
>gi|301624793|ref|XP_002941683.1| PREDICTED: sortilin-related receptor-like [Xenopus (Silurana)
tropicalis]
Length = 2208
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 95/218 (43%), Gaps = 32/218 (14%)
Query: 165 CHPNEL-RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C P L RC S C+ LS CD + DC + DE +C +F+C G CI SW
Sbjct: 1108 CDPEALFRCQGSGACIPLSYKCDLEDDCGDNSDESHCEAHQCKEDEFNCSSGMCIRLSWV 1167
Query: 224 CDGFVDCLEDGSDEPN-TCI-HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CDG DC D SDE N T I H C QC S CIP W+CD + DC D +D
Sbjct: 1168 CDGDNDC-RDWSDEANCTAISHTCEATSFQCHDS-HCIPQKWVCDGDTDCQ-----DGSD 1220
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
ED + NG QC + CIP CD DC D DE C
Sbjct: 1221 EDHSICEKKCNG-FQCQ-NGSCIPSVKHCDGVNDCP-----DGADEQ----------QCE 1263
Query: 342 P-----NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
P + C + QC+ S CDG C +G DE P
Sbjct: 1264 PLCTRYMDFVCRNRQQCLFHSMVCDGVKQCRDGSDEDP 1301
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 130/309 (42%), Gaps = 61/309 (19%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGS----- 159
+R+E+ +G+ R ++ N+ P ++ + N+ +YW D S L+ + + +G+
Sbjct: 932 DRIERIDFNGQQRM-IILDNLPHPYAIAVFKNE--IYWDDWSQLSIFRASKYNGARMEGI 988
Query: 160 --------------------HNAVLCHPNELRC---GSSNQCVALSKFCDGKP------- 189
HNA + P L C ++++ S+ G P
Sbjct: 989 IGRLTGVMDMKIFYKDKATGHNACVLKPCSLLCLPKANNSKICRCSEGVKGTPLSSGDIQ 1048
Query: 190 -DCSNGED-EGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DC G + C + C P Q+ C G CI W+CD DC D SDE N
Sbjct: 1049 CDCPQGYLLKNKTCVKQENTCLPSQYRCSNGNCINSIWQCDTDNDC-GDMSDEKNCPTTT 1107
Query: 245 C-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
C +C S CIP ++ CD E DC DN+DE + HQC + C+ S C
Sbjct: 1108 CDPEALFRCQGSGACIPLSYKCDLEDDCG-----DNSDESHCEAHQCKEDEFNCS-SGMC 1161
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
I +W+CD + DC D +DE SH C +C S+ C+ CDG
Sbjct: 1162 IRLSWVCDGDNDCR-----DWSDEANCTAISHT---CEATSFQCHDSH-CIPQKWVCDGD 1212
Query: 364 PDCSNGEDE 372
DC +G DE
Sbjct: 1213 TDCQDGSDE 1221
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 89/245 (36%), Gaps = 57/245 (23%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNAECTPGQFSCGMGKCIP 219
+ C + QC+ S CDG C +G DE GP C P F C G CI
Sbjct: 1271 DFVCRNRQQCLFHSMVCDGVKQCRDGSDEDPQYAGCSQGPEFQRTCDPHSFLCQNGVCIS 1330
Query: 220 ESWKCDGFVDCLEDGSDEPN----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
WKCDG DC D SDE N T I C + CIP W CD E DC
Sbjct: 1331 LVWKCDGMDDC-GDYSDEANCENPTDIPTCSRYYQFPCQNGHCIPTRWKCDHENDCG--- 1386
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALS--------------------KKCIPHNWLCDEEMD 315
DW C + V A + CI + W+CD D
Sbjct: 1387 -------DWSDEKDCGDYNVIAAETIPQTTSRPATCPSNHFRCDNGVCILNTWVCDGYKD 1439
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVL--------CHPNELRCGSSNQCVALSKFCDGKPDCS 367
C + +DE+ ++ V+ C E C C+ + CDG DC
Sbjct: 1440 C-----IHGSDEEGCPASANKTVVPTILPHGQCSQFEFECKKWKDCIPSWRHCDGNRDCR 1494
Query: 368 NGEDE 372
+G DE
Sbjct: 1495 DGTDE 1499
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 65/163 (39%), Gaps = 33/163 (20%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE------------PNTCIH-QCFNGQ 249
A C F C G CI +W CDG+ DC+ GSDE P H QC +
Sbjct: 1413 ATCPSNHFRCDNGVCILNTWVCDGYKDCIH-GSDEEGCPASANKTVVPTILPHGQCSQFE 1471
Query: 250 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE---DWDKFHQCFNGQVQCALSKKCIPH 306
+C K CIP CD DC D TDE K C NG + C + CI
Sbjct: 1472 FECKKWKDCIPSWRHCDGNRDCR-----DGTDELNCPTHKPSLCVNGSL-CEDGEACIAL 1525
Query: 307 NWLCDEEMDCS--------TDDIVDNTDED--WDKYFSHNAVL 339
CD +DCS TDD + ++ W F+ N L
Sbjct: 1526 LDFCDGFLDCSDGSDENNCTDDTIVQKVQNLQWTADFTGNITL 1568
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------GPFCNAECTPGQFS 211
C N RC + C+ + CDG DC +G DE + +C+ +F
Sbjct: 1415 CPSNHFRC-DNGVCILNTWVCDGYKDCIHGSDEEGCPASANKTVVPTILPHGQCSQFEFE 1473
Query: 212 CGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDE 267
C K CIP CDG DC DG+DE N H+ C NG + C + CI CD
Sbjct: 1474 CKKWKDCIPSWRHCDGNRDC-RDGTDELNCPTHKPSLCVNGSL-CEDGEACIALLDFCDG 1531
Query: 268 EMDCSTDDIVDNTDED 283
+DCS D +DE+
Sbjct: 1532 FLDCS-----DGSDEN 1542
>gi|403287661|ref|XP_003935057.1| PREDICTED: basement membrane-specific heparan sulfate proteoglycan
core protein [Saimiri boliviensis boliviensis]
Length = 4672
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE--CTPGQFSCGMGKCIPESW 222
C P E+ C S C+ CDG+ DC +G DE C C P +F+CG G C + W
Sbjct: 657 CGPQEVAC-RSGHCIPRDYLCDGQDDCKDGSDELD-CGTPPPCEPNEFACGNGHCALKLW 714
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
+CDG DC +D +DE N + C Q +C + CIP ++ CDE+ DC D
Sbjct: 715 RCDGDFDC-KDQTDETNCPAKRPEEVCGPTQFRCVSTNTCIPASFHCDEDSDCP-----D 768
Query: 279 NTDE 282
+DE
Sbjct: 769 RSDE 772
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 65/223 (29%), Positives = 86/223 (38%), Gaps = 36/223 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECT----------PGQF 210
C E C S N+CVAL CD +PDC + DE P T P +
Sbjct: 571 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCDEPVLGVSPTFSLLMETTPLPPRL 630
Query: 211 SCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
+ P + + S P C Q +V C S CIP ++LCD + D
Sbjct: 631 EAATTRQPPHTPAPQPLLP----ASARPLPCGPQ----EVACR-SGHCIPRDYLCDGQDD 681
Query: 271 CSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C D +DE D C + C + C W CD + DC D TDE
Sbjct: 682 CK-----DGSDELDCGTPPPCEPNEFACG-NGHCALKLWRCDGDFDCK-----DQTDET- 729
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +C P + RC S+N C+ S CD DC + DE
Sbjct: 730 NCPAKRPEEVCGPTQFRCVSTNTCIPASFHCDEDSDCPDRSDE 772
>gi|242012902|ref|XP_002427164.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511447|gb|EEB14426.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1928
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P C+P F C KCIP+SW CD DC ++G DE N ++ C + C S +C
Sbjct: 992 PAVEHTCSPNYFKCADEKCIPKSWVCDKEKDC-KNGLDEINCPVNSCPSNMFACP-SGQC 1049
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
I +W CD ++DCS D DE + +C + + +C + +CI + CD E DC
Sbjct: 1050 INLSWRCDFDVDCS-----DGADEKNCTYPECSDEEFRCK-NGRCIEARYKCDSENDCK- 1102
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DN+DE+ + N C P+E +C +S C+ S CDG DC N EDE
Sbjct: 1103 ----DNSDEENCPVPAKNTT-CKPDEFKCETS--CIPNSWRCDGDKDCVNNEDE 1149
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 110/237 (46%), Gaps = 21/237 (8%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDG 226
P+ + S QC+ LS CD DCS+G DE EC+ +F C G+CI +KCD
Sbjct: 1038 PSNMFACPSGQCINLSWRCDFDVDCSDGADEKNCTYPECSDEEFRCKNGRCIEARYKCDS 1097
Query: 227 FVDCLEDGSDEPNTCI----HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
DC +D SDE N + C + +C S CIP++W CD + DC V+N DE
Sbjct: 1098 ENDC-KDNSDEENCPVPAKNTTCKPDEFKCETS--CIPNSWRCDGDKDC-----VNNEDE 1149
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTDEDWDKYFSHNAVLCH 341
C + Q QC +KKCI W+CD E DC D +D E + + + C+
Sbjct: 1150 TNCTMGACDSWQFQCK-NKKCIFQIWVCDNEDDCGDNSDELDCKLEKENTKHNQSQNSCN 1208
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNNKADCENLKCSHKCSPT 394
+C S C+ L CD DC + DE N+K N+ H +PT
Sbjct: 1209 AWTFKC-DSGICIPLWWKCDQINDCKDMSDEIGCDSAVSNSKPTVPNI--PHPKTPT 1262
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 111/289 (38%), Gaps = 74/289 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P+E +C +S C+ S CDG DC N EDE C QF C KCI + W C
Sbjct: 1119 CKPDEFKCETS--CIPNSWRCDGDKDCVNNEDETNCTMGACDSWQFQCKNKKCIFQIWVC 1176
Query: 225 DGFVDC----------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST- 273
D DC LE + + N + C +C S CIP W CD+ DC
Sbjct: 1177 DNEDDCGDNSDELDCKLEKENTKHNQSQNSCNAWTFKCD-SGICIPLWWKCDQINDCKDM 1235
Query: 274 ------DDIVDNTDEDWD-----KFHQCFNGQVQCALSKKCIPHNWLCD---------EE 313
D V N+ K C Q +C + +CI ++W+CD +E
Sbjct: 1236 SDEIGCDSAVSNSKPTVPNIPHPKTPTCKEHQFRC-FTGECIENSWVCDGMNDCDAGEDE 1294
Query: 314 MDCSTD---------------------------DIVDNTDE---DWDKYFSHNAV-LCHP 342
++C D D D +DE + +K + A C P
Sbjct: 1295 LNCQKDEKCESNQFLCRTDGSCIFLKQVCNGKVDCPDGSDEKDCETEKILPNPATPSCQP 1354
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKC 391
C S +C+ L+ CDG C +G DE +CEN K ++
Sbjct: 1355 GFFPCDGS-RCIPLAYVCDGDQICYDGTDE-------TNCENFKRVYQV 1395
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 113/288 (39%), Gaps = 38/288 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNI-QWPSSLVIDYNQDILYWCDSHLNTVE 152
W+L P + +A ++G N L TK + WP+ + ID+ + +YW D+ L+ +
Sbjct: 810 WELEEPSV-------SRAYLNGSNIKVLFTKPVVMWPNGITIDHIAERIYWVDARLDYIA 862
Query: 153 SVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
S ++G + +E +N ++ F D D+ N
Sbjct: 863 SSDLNGKRFKKIVANDE----RANHPFGVAVFKD-----YVYWDDWKQINIFMADKDHGV 913
Query: 213 G---MGKCIPESWKCDGFVDCLEDGSD---EP--NTCIHQCFNGQVQCALSKKCIPHNWL 264
G + K I F ++G++ +P N C H CF G S C + L
Sbjct: 914 GIEPLLKNISALMDLKVFAHGFQEGTNPCGDPALNKCSHLCFGGPGN-TYSCMCPQNMVL 972
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D C D H C +CA +KCIP +W+CD+E DC +
Sbjct: 973 FDNNCYCIGKKQPDENGACPAVEHTCSPNYFKCA-DEKCIPKSWVCDKEKDCK-----NG 1026
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + C N C S QC+ LS CD DCS+G DE
Sbjct: 1027 LDE-----INCPVNSCPSNMFAC-PSGQCINLSWRCDFDVDCSDGADE 1068
>gi|442763233|gb|JAA73775.1| Putative megalin, partial [Ixodes ricinus]
Length = 204
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 80/174 (45%), Gaps = 21/174 (12%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCAL----SKKCI 259
C+ F C G+C+P+ W CD DC E G DEP +C QC Q C CI
Sbjct: 33 CSTDNFRCSNGRCVPQRWVCDYQRDC-EGGEDEPQSCAPPQCNPNQFSCGQYVFNQSYCI 91
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
P +W CD +DC VD TDE + K+ C G +C S C+P + CD DC
Sbjct: 92 PKHWKCDNVVDC-----VDGTDESGNCKYRVCEEGDHKCG-SGLCVPASKKCDGYYDC-- 143
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE + + N C NE RC N+C+ SK CD DC + DE
Sbjct: 144 ------RDESDEASCATNGTSCRLNEFRCRHGNKCIDESKKCDHWDDCGDNSDE 191
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 82/176 (46%), Gaps = 22/176 (12%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCG-----MG 215
C + RC S+ +CV CD + DC GEDE C +C P QFSCG
Sbjct: 30 TTTCSTDNFRC-SNGRCVPQRWVCDYQRDCEGGEDEPQSCAPPQCNPNQFSCGQYVFNQS 88
Query: 216 KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CIP+ WKCD VDC+ DG+DE C ++ C G +C S C+P + CD DC
Sbjct: 89 YCIPKHWKCDNVVDCV-DGTDESGNCKYRVCEEGDHKCG-SGLCVPASKKCDGYYDCR-- 144
Query: 275 DIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
D +DE C + +C KCI + CD DC DN+DE+
Sbjct: 145 ---DESDEASCATNGTSCRLNEFRCRHGNKCIDESKKCDHWDDCG-----DNSDEE 192
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 165 CHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIP 219
C+PN+ CG + + C+ CD DC +G DE C C G CG G C+P
Sbjct: 73 CNPNQFSCGQYVFNQSYCIPKHWKCDNVVDCVDGTDESGNCKYRVCEEGDHKCGSGLCVP 132
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH--QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S KCDG+ DC D SDE + + C + +C KCI + CD DC
Sbjct: 133 ASKKCDGYYDC-RDESDEASCATNGTSCRLNEFRCRHGNKCIDESKKCDHWDDCG----- 186
Query: 278 DNTDEDWDKFHQCFNGQV 295
DN+DE+ F C GQ
Sbjct: 187 DNSDEEGCDFAPCNEGQF 204
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 142 YW-CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 200
+W CD+ ++ V+ G+ +C + +CGS CV SK CDG DC + DE
Sbjct: 94 HWKCDNVVDCVDGTDESGNCKYRVCEEGDHKCGSG-LCVPASKKCDGYYDCRDESDEASC 152
Query: 201 C--NAECTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV 250
C +F C G KCI ES KCD + DC D SDE C GQ
Sbjct: 153 ATNGTSCRLNEFRCRHGNKCIDESKKCDHWDDCG-DNSDEEGCDFAPCNEGQF 204
>gi|405976910|gb|EKC41388.1| Basement membrane-specific heparan sulfate proteoglycan core
protein [Crassostrea gigas]
Length = 4465
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 96/210 (45%), Gaps = 21/210 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFSCGMGKCIPESWK 223
C ++LRC CV + CDG PDC +G DE +C GQ +C G C P +
Sbjct: 743 CKDDQLRC-YDGSCVDKAYLCDGFPDCVDGADERNCTTTRDCPQGQHTCDDGTCAPPGSQ 801
Query: 224 CDGFVDCLEDGSDE-PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DGSDE P C C +G+ CA ++CIP CD ++C D +DE
Sbjct: 802 CDGKTDC-GDGSDEFPRYC--GCRSGEFMCADGERCIPSAAECDGRINCP-----DRSDE 853
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ C + C + +CI LCD DCS D D D K S
Sbjct: 854 HANCTVSCRTDEFTCR-NGQCIDRRRLCDGYPDCS--DRSDEEDRSCRKCDSA------- 903
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C +QCV S CDG DC + DE
Sbjct: 904 SQFTCVFEHQCVNASLVCDGFDDCVDKSDE 933
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 103/249 (41%), Gaps = 52/249 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C +C+ + CDG+ +C + DE C C +F+C G+CI C
Sbjct: 821 CRSGEFMCADGERCIPSAAECDGRINCPDRSDEHANCTVSCRTDEFTCRNGQCIDRRRLC 880
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNG-QVQCALSKKCIPHNWLCD---------EEMDCS-- 272
DG+ DC D SDE + +C + Q C +C+ + +CD +EMDCS
Sbjct: 881 DGYPDC-SDRSDEEDRSCRKCDSASQFTCVFEHQCVNASLVCDGFDDCVDKSDEMDCSCS 939
Query: 273 -------TDDIVDNTDEDWDKFHQCFNG-----------QVQCALSKKCIPHNWLCDEEM 314
T+ + D+ CF+ + C K C+P C+ +
Sbjct: 940 PTSQFTCTNGQCIDIRRRCDRVTDCFDNSDEVGCGCRSDEFTCFSDKACVPLTSRCNRQR 999
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-- 372
DC D +DE +D C +E C S +CV ++ CDG+ DC +G DE
Sbjct: 1000 DCQ-----DGSDE-FD-------CPCLDSEFTCNSDGKCVPQTRRCDGRQDCQDGSDEND 1046
Query: 373 ------GPF 375
GPF
Sbjct: 1047 CRGESCGPF 1055
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 91/207 (43%), Gaps = 29/207 (14%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP-GQFSCGMGKCIPESWKCDG 226
++ C +QCV S CDG DC + DE + C+P QF+C G+CI +CD
Sbjct: 904 SQFTCVFEHQCVNASLVCDGFDDCVDKSDE---MDCSCSPTSQFTCTNGQCIDIRRRCDR 960
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC D SDE C + + C K C+P C+ + DC D +DE
Sbjct: 961 VTDCF-DNSDEVGC---GCRSDEFTCFSDKACVPLTSRCNRQRDCQ-----DGSDE---- 1007
Query: 287 FH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
F C + + C KC+P CD DC D +DE+ + S C P E
Sbjct: 1008 FDCPCLDSEFTCNSDGKCVPQTRRCDGRQDCQ-----DGSDENDCRGES-----CGPFEF 1057
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C CV K CDG DC +G DE
Sbjct: 1058 QC-RGGGCVESIKHCDGYFDCPDGSDE 1083
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 12/143 (8%)
Query: 137 NQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 196
Q+ Y+ + L+ V+S+ +C P E C + QC+ CDG DC +G D
Sbjct: 1168 GQESRYFAIATLD-VQSLTPPTLPPTGICRPGEAVC-KNLQCINADYRCDGDRDCEDGSD 1225
Query: 197 EGP-FCNAE--CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-----CFNG 248
E P CN + C P QF C G C + W+CDG DC DGSDE N C ++ C +
Sbjct: 1226 EDPAICNFDKLCEPNQFKCSNGMCAMKIWRCDGDNDC-GDGSDEQN-CPNRKPGDPCDSI 1283
Query: 249 QVQCALSKKCIPHNWLCDEEMDC 271
+ QC +C+P ++ CD E+DC
Sbjct: 1284 EYQCTSGDQCVPASYQCDGEIDC 1306
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 99/272 (36%), Gaps = 79/272 (29%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C S +CV ++ CDG+ DC +G DE C P +F C G C+ C
Sbjct: 1012 CLDSEFTCNSDGKCVPQTRRCDGRQDCQDGSDENDCRGESCGPFEFQCRGGGCVESIKHC 1071
Query: 225 DGFVDCLEDGSDE----------------------PNTCIHQCFNGQVQCALSKKC---- 258
DG+ DC DGSDE P+ + + Q +C S+
Sbjct: 1072 DGYFDC-PDGSDEIMCTTRTTVAPTERPLIITVSPPSLRLREGRQAQFRCQPSRPVLVRW 1130
Query: 259 --------------------IPHNWLCD-------------EEMDCSTDDIVDNTDEDWD 285
IP + D +T D+ T
Sbjct: 1131 TRYSNGSLPFRASVEGNLLTIPELQMADSGSYMCSVVGQESRYFAIATLDVQSLTPPTLP 1190
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-----WDKYFSHNAVLC 340
C G+ C + +CI ++ CD + DC D +DED +DK LC
Sbjct: 1191 PTGICRPGEAVCK-NLQCINADYRCDGDRDCE-----DGSDEDPAICNFDK-------LC 1237
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
PN+ +C S+ C CDG DC +G DE
Sbjct: 1238 EPNQFKC-SNGMCAMKIWRCDGDNDCGDGSDE 1268
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 139 DILYWCDSHLNTVESVRVDGSHN----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG 194
D ++ CDS + DGS C NE RC + QC+ + C+ + DC +G
Sbjct: 381 DAIFRCDSQQDCF-----DGSDEKNCPVTECGVNEFRCNDNRQCIPAAFVCNLQRDCLDG 435
Query: 195 EDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN---TCIHQCFNGQVQ 251
DE C+ C+ +F C G CI ++CDG + ED SDE N T + C G ++
Sbjct: 436 SDE-ERCDPRCSAEEFQCSNGACINRDYRCDGVPNDCEDNSDETNCGGTSVS-CPEGLLR 493
Query: 252 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQ-----CALSKKC- 303
C C+ CD + C +D +DE+ C GQ++ C + K+C
Sbjct: 494 CE-DGTCV-QGKRCDGVIHC-----LDRSDENNCGGTPDTCPAGQIRCKNGDCVVGKRCD 546
Query: 304 -IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
+P + +E DC + +C ++ +C S C+ CDG
Sbjct: 547 GLPECYDSSDEDDCVVVTVPPTLPPQ----------ICTADQFQCNDS-MCIPSDLKCDG 595
Query: 363 KPDCSNGEDE 372
PDC + DE
Sbjct: 596 TPDCDDSSDE 605
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 99/222 (44%), Gaps = 42/222 (18%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C GQ+ C G CI ++CD DC DGSDE N + +C + +C +++CIP ++
Sbjct: 367 CLIGQYQCDNGDCIDAIFRCDSQQDCF-DGSDEKNCPVTECGVNEFRCNDNRQCIPAAFV 425
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
C+ + DC +D +DE+ +C + QC+ + CI ++ CD +D DN
Sbjct: 426 CNLQRDC-----LDGSDEERCD-PRCSAEEFQCS-NGACINRDYRCDG----VPNDCEDN 474
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+DE +V C LRC CV K CDG C + DE
Sbjct: 475 SDE---TNCGGTSVSCPEGLLRC-EDGTCVQ-GKRCDGVIHCLDRSDE------------ 517
Query: 385 LKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCD 426
+ C TP CPAGQ +C + D C++ CD
Sbjct: 518 ----NNCGGTPD----TCPAGQ----IRCKNGD-CVVGKRCD 546
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 105/295 (35%), Gaps = 38/295 (12%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC--NAECTPGQFSCGMGKCIPE 220
+C ++ +C S C+ CDG PDC + DE C N C G+F C G+C+
Sbjct: 573 ICTADQFQCNDS-MCIPSDLKCDGTPDCDDSSDEFLSLCGTNTFCPEGEFRCDDGQCVGG 631
Query: 221 SWKCDGFVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
C+ DC DGSDE N C +V+ + + +N DC V
Sbjct: 632 DTLCNIVRDC-RDGSDESVNICGE-----RVRLDIQQSQQIYNEGETAVFDCVATGNVGV 685
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCD-EEMDCSTDDIVDNTDEDWDKYFSHNAV 338
T W + + IP + D C TD + + D
Sbjct: 686 TIR-WKTKDGALPAKAVLQGGRLSIPSLTMNDVTAYVCYTDTVAGVGEASVDLLV---IP 741
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGA 398
C ++LRC CV + CDG PDC +G DE C DC + H C
Sbjct: 742 ACKDDQLRC-YDGSCVDKAYLCDGFPDCVDGADE-RNCTTTRDCP--QGQHTCD----DG 793
Query: 399 MCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSC 453
C P Q KT C D + C C G + DG+ C
Sbjct: 794 TCAPPGSQCDGKTDCGDGSD--------------EFPRYCGCRSGEFMCADGERC 834
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 20/133 (15%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED-----WDKFHQCFNGQVQCAL 299
C G+ C + +CI ++ CD + DC D +DED +DK C Q +C+
Sbjct: 1195 CRPGEAVCK-NLQCINADYRCDGDRDCE-----DGSDEDPAICNFDKL--CEPNQFKCS- 1245
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ C W CD + DC D +DE + C E +C S +QCV S
Sbjct: 1246 NGMCAMKIWRCDGDNDCG-----DGSDEQ-NCPNRKPGDPCDSIEYQCTSGDQCVPASYQ 1299
Query: 360 CDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 1300 CDGEIDCQDRSDE 1312
>gi|444725271|gb|ELW65844.1| Sortilin-related receptor [Tupaia chinensis]
Length = 2628
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1463 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1522
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1523 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1575
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC +
Sbjct: 1576 NCEKKCNG-FRCP-NGTCIPSSKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1622
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ CDG C +G DE P
Sbjct: 1623 FVCKNRQQCLFRPMVCDGVVQCRDGSDEDP 1652
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 96/235 (40%), Gaps = 51/235 (21%)
Query: 166 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCD 225
+ +E CG Q L+ + S E P C+ QF C G CIP WKCD
Sbjct: 1695 YSDEANCGMGAQTGLLTPTLPSR--GSENPTEAPNCSRYF---QFRCENGHCIPNRWKCD 1749
Query: 226 GFVDCLEDGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
DC D SDE P+TC+ F +C S C+ W+CD D
Sbjct: 1750 RENDC-GDWSDEKDCGDSHFLPSPTPGPSTCLPNYF----RCG-SGACVMDTWVCDGYRD 1803
Query: 271 CSTDDIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C+ D +DE+ + +C + +C KKCIP+ CD DC
Sbjct: 1804 CA-----DGSDEEACPSLVNVTSASTPTRLGRCDRFEFECRQPKKCIPNWKRCDGHQDCQ 1858
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE +H+++ C E +C CV LS+ CDG DCS+ DE
Sbjct: 1859 -----DGQDEA--NCPTHSSLTCTSREFKCEDGEACVVLSERCDGFLDCSDESDE 1906
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 86/213 (40%), Gaps = 39/213 (18%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEGPFC---------NAECTPGQFSCGMGKCIPESW 222
C + QC+ CDG C +G DE P + C F C G CI W
Sbjct: 1625 CKNRQQCLFRPMVCDGVVQCRDGSDEDPAFAGCSQDPEFHKACDEFGFQCQNGVCISLVW 1684
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD--EEMDCSTDDIVDNT 280
KCDG DC D SDE N C G Q L +P + E +CS
Sbjct: 1685 KCDGMDDC-GDYSDEAN-----CGMG-AQTGLLTPTLPSRGSENPTEAPNCSR------- 1730
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST-DDIVDNTDEDWDKYFSHNAVL 339
+ +F +C NG CIP+ W CD E DC D D D + +
Sbjct: 1731 ---YFQF-RCENGH--------CIPNRWKCDRENDCGDWSDEKDCGDSHFLPSPTPGPST 1778
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C PN RCG S CV + CDG DC++G DE
Sbjct: 1779 CLPNYFRCG-SGACVMDTWVCDGYRDCADGSDE 1810
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 71/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P F CG G C+ ++W
Sbjct: 1741 CIPNRWKCDRENDCGDWSDEKDCGDSHFLPSPTPGP---STCLPNYFRCGSGACVMDTWV 1797
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T + +C + +C KKCIP+ CD D
Sbjct: 1798 CDGYRDC-ADGSDEEACPSLVNVTSASTPTRLGRCDRFEFECRQPKKCIPNWKRCDGHQD 1856
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + C+ + CD +DCS
Sbjct: 1857 CQ-----DGQDEANCPTHSSLTCTSREFKCEDGEACVVLSERCDGFLDCS 1901
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 129/349 (36%), Gaps = 101/349 (28%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L+ +E + G +V
Sbjct: 1206 LKPGIYRSNMDGSATYRLVSEDVKWPNGISVD--DHWIYWTDAYLDCIERITFSGQQRSV 1263
Query: 164 ----LCHP-------NELR---------------CGSSNQCVA--------LSKFCDGKP 189
L HP NE+ GS +A + F GK
Sbjct: 1264 ILDNLPHPYAIAVFKNEIYWDDWSQLSIFRASKYTGSQMDVLASQLTGLMDMKIFYKGKN 1323
Query: 190 DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC------DGFVDCLEDGSDEPNTCIH 243
SN P C+ C P + +C PE D DC + + +TC+
Sbjct: 1324 AGSNACVPRP-CSLLCLPMANNSRSCRC-PEGVSSSVLPSGDLMCDCPQGYQLKNSTCVK 1381
Query: 244 Q---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----------W------ 284
+ C Q +C+ + CI W CD + DC D +DE W
Sbjct: 1382 EENTCLRSQYRCS-NGNCINSIWWCDFDNDCG-----DLSDERNCHLKQPVLIWKLAVDG 1435
Query: 285 ----------DKFHQCF---------NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
Q + + Q +C S CIP ++ CD E DC DN+
Sbjct: 1436 YTLISLGCKLQVLMQLYFFSTTVCDLDTQFRCQESGTCIPLSYKCDLEDDCG-----DNS 1490
Query: 326 DEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
DE SH C +E C SS C+ S CDG DC + DE
Sbjct: 1491 DE------SHCEMHQCRSDEYNC-SSGMCIRSSWVCDGDNDCRDWSDEA 1532
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ K CDG DC +G+DE + CT +F C G+ C+
Sbjct: 1831 CDRFEFECRQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSSLTCTSREFKCEDGEACVVL 1890
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1891 SERCDGFLDC-SDESDE 1906
>gi|260824643|ref|XP_002607277.1| hypothetical protein BRAFLDRAFT_88225 [Branchiostoma floridae]
gi|229292623|gb|EEN63287.1| hypothetical protein BRAFLDRAFT_88225 [Branchiostoma floridae]
Length = 931
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 124/269 (46%), Gaps = 32/269 (11%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKC 224
P+ C ++C +LS+ C+G +C +G DE EC PG F C G C P W+C
Sbjct: 72 PDVFSCDIDDRCFSLSRVCNGVENCPDGSDEVDCMLKECPLPGYFKCVGSATCFPPVWQC 131
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DG+ DC EDGSDE + +C+N ++C S C CD DD D +DE+
Sbjct: 132 DGWDDC-EDGSDEKDCTSKECYNAYDLKCESSGVCFSPLKQCD-----GFDDCADGSDEE 185
Query: 284 WDKFHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+C + + +C S C+P C+ D+ +D +DE K + P
Sbjct: 186 NCTSIECPSPEDFKCESSGICVPPWKQCN-----GLDNCIDGSDE---KNCTSKECP-SP 236
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFC 402
+C SS CVA CDG DC +G DE A+C +++C P+P C
Sbjct: 237 GYFKCESSGICVAPHWQCDGVADCLDGSDE-------ANCTSIEC-----PSPEDFKCES 284
Query: 403 PAGQNPNKTQCVDADECLIDGSCDQTCTN 431
P QC D C IDGS ++ CT+
Sbjct: 285 SGICVPPWKQCNGLDNC-IDGSDEKNCTS 312
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 117/258 (45%), Gaps = 34/258 (13%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKC 224
P + +C SS CV K C+G +C +G DE + EC +PG F C G C+ W+C
Sbjct: 195 PEDFKCESSGICVPPWKQCNGLDNCIDGSDEKNCTSKECPSPGYFKCESSGICVAPHWQC 254
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DG DCL DGSDE N +C + + +C S C+P C+ D+ +D +DE
Sbjct: 255 DGVADCL-DGSDEANCTSIECPSPEDFKCESSGICVPPWKQCN-----GLDNCIDGSDEK 308
Query: 284 WDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--------WDKYFS 334
+C + G +C S C+ +W CD DC +D +DE+ +YF
Sbjct: 309 NCTSKECPSPGYFKCESSGICVAPHWQCDGVADC-----LDGSDEENCTSIECPSPEYFK 363
Query: 335 HNAV--------LCHPNE--LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCEN 384
+ C P + C ++ C+ + DG DC++GEDE P +A E
Sbjct: 364 CESSGICFTPWKQCVPKDCFFTCRDNDTCLPTRQLGDGHQDCTDGEDERPGDVEQALAET 423
Query: 385 L-KCSHKCSPTPRGAMCF 401
CS+ CS A C
Sbjct: 424 WGSCSYNCSSVYGNASCV 441
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 121/265 (45%), Gaps = 40/265 (15%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSC-GMGKCIPESWKCDG 226
+L+C SS C + K CDG DC++G DE + EC +P F C G C+P +C+G
Sbjct: 156 DLKCESSGVCFSPLKQCDGFDDCADGSDEENCTSIECPSPEDFKCESSGICVPPWKQCNG 215
Query: 227 FVDCLEDGSDEPNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
+C+ DGSDE N +C + G +C S C+ +W CD DC +D +DE
Sbjct: 216 LDNCI-DGSDEKNCTSKECPSPGYFKCESSGICVAPHWQCDGVADC-----LDGSDEANC 269
Query: 286 KFHQCFNGQ-VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+C + + +C S C+P C+ D+ +D +DE K + P
Sbjct: 270 TSIECPSPEDFKCESSGICVPPWKQCN-----GLDNCIDGSDE---KNCTSKECP-SPGY 320
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPR------GA 398
+C SS CVA CDG DC +G DE +C +++C P+P
Sbjct: 321 FKCESSGICVAPHWQCDGVADCLDGSDE-------ENCTSIEC-----PSPEYFKCESSG 368
Query: 399 MCFCPAGQNPNKT---QCVDADECL 420
+CF P Q K C D D CL
Sbjct: 369 ICFTPWKQCVPKDCFFTCRDNDTCL 393
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 100/234 (42%), Gaps = 33/234 (14%)
Query: 202 NAECTPGQFSCGMGK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQV-QCALSKKCI 259
EC F+C C+ S +CDGF DGSDE T C + V C + +C
Sbjct: 26 TVECPSSTFACKTTDDCVDLSERCDGFRSHCPDGSDEECT-TPDCVSPDVFSCDIDDRCF 84
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCST 318
+ +C+ +C D +DE +C G +C S C P W CD
Sbjct: 85 SLSRVCNGVENCP-----DGSDEVDCMLKECPLPGYFKCVGSATCFPPVWQCD-----GW 134
Query: 319 DDIVDNTDE-DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
DD D +DE D +NA +L+C SS C + K CDG DC++G DE
Sbjct: 135 DDCEDGSDEKDCTSKECYNAY-----DLKCESSGVCFSPLKQCDGFDDCADGSDE----- 184
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
+C +++C P+P C P QC D C IDGS ++ CT+
Sbjct: 185 --ENCTSIEC-----PSPEDFKCESSGICVPPWKQCNGLDNC-IDGSDEKNCTS 230
>gi|402582212|gb|EJW76158.1| hypothetical protein WUBG_12932, partial [Wuchereria bancrofti]
Length = 331
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 19/235 (8%)
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+K CI +W CD + DC +D +DE + + QC + QCA + KCIP++W CD
Sbjct: 3 NKHCIHASWECDGDNDC-----LDGSDEHPNCTYSQCQSEFWQCA-NNKCIPNSWKCDGN 56
Query: 314 MDCSTDDI-VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC D TD+ N+ C + RC SS +C+A +K CD DCS+ DE
Sbjct: 57 DDCDDGSDEKDCTDKSASSSSITNS--CPVGQFRC-SSGECIAETKVCDRVYDCSDRSDE 113
Query: 373 GP--FCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLID-GSCD 426
F N E C KC P C C G +K C D DEC G C
Sbjct: 114 SSKCFINECTSAEKALCEQKCVDLPIDYRCDCFDGFALDKDDKKSCHDIDECETGLGQCS 173
Query: 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
Q C N +Y C CT+GY + D ++C V+ D ++F++ IR++ L+G
Sbjct: 174 QKCENKIGTYKCWCTDGYAISSDDRTCKRVST--DPEPWLLFANKHYIRKLTLDG 226
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFV---- 228
++ C+ S CDG DC +G DE P C ++C + C KCIP SWKCDG
Sbjct: 2 ANKHCIHASWECDGDNDCLDGSDEHPNCTYSQCQSEFWQCANNKCIPNSWKCDGNDDCDD 61
Query: 229 -----DCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
DC D S ++ + C GQ +C+ S +CI +CD DCS D +DE
Sbjct: 62 GSDEKDCT-DKSASSSSITNSCPVGQFRCS-SGECIAETKVCDRVYDCS-----DRSDES 114
Query: 284 WDKFHQCFNGQVQCALSKKCI--PHNWLCD 311
F + +KC+ P ++ CD
Sbjct: 115 SKCFINECTSAEKALCEQKCVDLPIDYRCD 144
>gi|47216973|emb|CAG04915.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1574
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 134/337 (39%), Gaps = 48/337 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-------PFCNAE---CTPGQFSCGM 214
C + C S+ C++ ++ CDG+ DC +G DEG P E C C
Sbjct: 499 CSSPSVLCPGSSLCISPAQVCDGRTDCPDGSDEGNCLRFMLPTAQTEVPQCHQSAKLCDD 558
Query: 215 GK-CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
GK C+ S CDG DCL DGSDE C C G+ QC+ K CIP +CD C
Sbjct: 559 GKECVLFSHLCDGERDCL-DGSDELG-CPETCKPGEFQCSHGKMCIPEAQVCDGRPQC-- 614
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE D + CA +CIP ++CD E DC D TDE
Sbjct: 615 ---WDQSDE-IDCRRPTMTCEFHCADGSRCIPKKFVCDGERDCP-----DGTDE------ 659
Query: 334 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
++ C C+ + CDG+ C +G DE C+N D K +
Sbjct: 660 -FGCGRNFQDDFLCTDGTVCIPREEVCDGRSHCPDGSDE-KLCHN--DLATCVMERKTAG 715
Query: 394 TPRGAMCFCPAGQNPNKTQCVDADECLIDGSC---DQTCTNTHLSYVC-SCTEGYTLRPD 449
T + P + P+ + + D +G C T +S++ +C T+
Sbjct: 716 TGQMKKDVLPTAKQPSFSVLMGIDAS-PEGRCATVKTTVKTDRMSWIVRACLRAATISVI 774
Query: 450 GK-------SCTAVNVPQDEPASIIFSSTVDIRRIHL 479
K SC V + P + S V RIHL
Sbjct: 775 TKPAVYQKPSCAMVR--ETAPMAQTKRSAVGDDRIHL 809
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 132/366 (36%), Gaps = 64/366 (17%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207
L +E +R + C C +CV CDG+ DC +G DE + C
Sbjct: 247 LPVLEDIRA-AQTKVLRCQRGSRLCDDGGECVLYRHVCDGEMDCKDGSDEQGCADFLCKD 305
Query: 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEP----------NTCIHQCFNGQVQCALSKK 257
+ C+P CDG C DGSDE T +C G C +
Sbjct: 306 RR------SCVPRGLVCDGRSHCY-DGSDETLCPTVAPPTDQTKGPKCRRGSRMCRDGTQ 358
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKF--------------HQCFNGQVQCALSKKC 303
C+ + +CD + DC D +DED F HQ + C + C
Sbjct: 359 CVLFSHVCDGKRDCG-----DGSDEDGCGFLQQSFSSLSRFFSLHQPSSVDFLCKDRRSC 413
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS-----HNAVLCHPNELRCGSSNQCVALSK 358
+P +CD C D +DE + C C QCV S
Sbjct: 414 VPRGLVCDGRSHC-----YDGSDETLCPTVAPPTDQTKGPKCRRGSRMCRDGTQCVLFSH 468
Query: 359 FCDGKPDCSNGEDEGPFCNNKADCENLK--CSHKCSPTPRGAMCFCPAGQNPNKTQCVDA 416
CDG+ DC +G DE +K ++ CS P ++C PA +T C D
Sbjct: 469 VCDGERDCGDGSDEDGCVASKESSFPVQGSCSSPSVLCPGSSLCISPAQVCDGRTDCPDG 528
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRR 476
+ +G+C + T + V C + L DGK C ++FS D R
Sbjct: 529 SD---EGNCLRFMLPTAQTEVPQCHQSAKLCDDGKEC------------VLFSHLCDGER 573
Query: 477 IHLNGS 482
L+GS
Sbjct: 574 DCLDGS 579
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 200
L W HL+ V +R V C ++ RC +S QCV+ CDG PDCS+ DE
Sbjct: 809 LIW---HLHQVTFLR----PGLVACESHQYRC-ASGQCVSEGLRCDGYPDCSDHSDEEDC 860
Query: 201 CNAECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKK 257
P Q C +C+ W CDG DC EDGSDE N + +C + Q QC S +
Sbjct: 861 ARPPRCPAQLRCPNSHECLQREWLCDGEDDC-EDGSDEKNCEMPPAKCRSYQWQCGDSSQ 919
Query: 258 CIPHNWLCDEEMDC 271
CIP W CD DC
Sbjct: 920 CIPLFWRCDGREDC 933
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 98/280 (35%), Gaps = 38/280 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------------GPFCNAECTPGQF 210
C C QCV S CDGK DC +G DE F + + F
Sbjct: 346 CRRGSRMCRDGTQCVLFSHVCDGKRDCGDGSDEDGCGFLQQSFSSLSRFFSLHQPSSVDF 405
Query: 211 SCGMGK-CIPESWKCDGFVDCLEDGSDEP----------NTCIHQCFNGQVQCALSKKCI 259
C + C+P CDG C DGSDE T +C G C +C+
Sbjct: 406 LCKDRRSCVPRGLVCDGRSHCY-DGSDETLCPTVAPPTDQTKGPKCRRGSRMCRDGTQCV 464
Query: 260 PHNWLCDEEMDCS----TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+ +CD E DC D V + + + C + V C S CI +CD D
Sbjct: 465 LFSHVCDGERDCGDGSDEDGCVASKESSFPVQGSCSSPSVLCPGSSLCISPAQVCDGRTD 524
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C N CH + C +CV S CDG+ DC +G DE
Sbjct: 525 CPDGSDEGNCLRFMLPTAQTEVPQCHQSAKLCDDGKECVLFSHLCDGERDCLDGSDE-LG 583
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVD 415
C +CSH G MC A + QC D
Sbjct: 584 CPETCKPGEFQCSH-------GKMCIPEAQVCDGRPQCWD 616
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 88/224 (39%), Gaps = 48/224 (21%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264
C Q+ C G+C+ E +CDG+ DC D SDE + Q++C S +C+ WL
Sbjct: 826 CESHQYRCASGQCVSEGLRCDGYPDC-SDHSDEEDCARPPRCPAQLRCPNSHECLQREWL 884
Query: 265 CDEEMDCSTDDIVDNTDEDWDKF--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
CD E DC D +DE + +C + Q QC S +CIP W CD DC
Sbjct: 885 CDGEDDCE-----DGSDEKNCEMPPAKCRSYQWQCGDSSQCIPLFWRCDGREDCRN---- 935
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
WD+Y H N L C ++C +E P
Sbjct: 936 -----AWDEY---TWFRLHSNALSCVDVDEC-----------------NEMP-------- 962
Query: 383 ENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGS 424
C H C TP +C+C P+ C DE L+ S
Sbjct: 963 -PSLCKHICMNTPGSYVCYCYPNFYLEPDDMSCKTKDEPLLLAS 1005
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 83/218 (38%), Gaps = 57/218 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECT-PGQFSC--------GM 214
C C QCV S CDG+ DC +G DE G + E + P Q SC G
Sbjct: 450 CRRGSRMCRDGTQCVLFSHVCDGERDCGDGSDEDGCVASKESSFPVQGSCSSPSVLCPGS 509
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
CI + CDG DC DGSDE N C + A ++ +P
Sbjct: 510 SLCISPAQVCDGRTDC-PDGSDEGN-----CLRFMLPTAQTE--VP-------------- 547
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
QC C K+C+ + LCD E DC +D +DE
Sbjct: 548 --------------QCHQSAKLCDDGKECVLFSHLCDGERDC-----LDGSDE------L 582
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E +C C+ ++ CDG+P C + DE
Sbjct: 583 GCPETCKPGEFQCSHGKMCIPEAQVCDGRPQCWDQSDE 620
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 125/345 (36%), Gaps = 65/345 (18%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---AECTPGQFSCGMGK----CIPE 220
++ C C+ + CDG+ C +G DE C+ A C + + G G+ +P
Sbjct: 668 DDFLCTDGTVCIPREEVCDGRSHCPDGSDE-KLCHNDLATCVMERKTAGTGQMKKDVLPT 726
Query: 221 ----SWKCDGFVDCLEDG----------SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
S+ +D +G +D + + C ++K + C
Sbjct: 727 AKQPSFSVLMGIDASPEGRCATVKTTVKTDRMSWIVRACLRAATISVITKPAVYQKPSCA 786
Query: 267 EEMDCSTDDIVDNTDEDWDKFH----------------QCFNGQVQCALSKKCIPHNWLC 310
+ + + D+ H C + Q +CA S +C+ C
Sbjct: 787 MVRETAPMAQTKRSAVGDDRIHLIWHLHQVTFLRPGLVACESHQYRCA-SGQCVSEGLRC 845
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D DCS D++DE+ C P +LRC +S++C+ CDG+ DC +G
Sbjct: 846 DGYPDCS-----DHSDEE----DCARPPRC-PAQLRCPNSHECLQREWLCDGEDDCEDGS 895
Query: 371 DEGPFCNNKADCENL--KCSHKCSPTPRGAMC------------FCPAGQNPNKTQCVDA 416
DE A C + +C P C + + N CVD
Sbjct: 896 DEKNCEMPPAKCRSYQWQCGDSSQCIPLFWRCDGREDCRNAWDEYTWFRLHSNALSCVDV 955
Query: 417 DEC--LIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
DEC + C C NT SYVC C + L PD SC + P
Sbjct: 956 DECNEMPPSLCKHICMNTPGSYVCYCYPNFYLEPDDMSCKTKDEP 1000
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 33/137 (24%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG-MGKCIPESWK 223
P +LRC +S++C+ CDG+ DC +G DE A+C Q+ CG +CIP W+
Sbjct: 867 PAQLRCPNSHECLQREWLCDGEDDCEDGSDEKNCEMPPAKCRSYQWQCGDSSQCIPLFWR 926
Query: 224 CDGFVDCLEDGSDE-----------------------PNTCIHQCFN--GQVQCALSKKC 258
CDG DC + DE P+ C H C N G C C
Sbjct: 927 CDGREDC-RNAWDEYTWFRLHSNALSCVDVDECNEMPPSLCKHICMNTPGSYVC----YC 981
Query: 259 IPHNWLCDEEMDCSTDD 275
P+ +L ++M C T D
Sbjct: 982 YPNFYLEPDDMSCKTKD 998
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++E++GM G R +V++++ WP SL D+ + +YW D L + S +DG V
Sbjct: 1189 QIERSGMDGSKREVVVSRDLSWPVSLAYDFLDNRVYWADEKLRCIGSTSLDGDDIKVMHE 1248
Query: 164 LCHP------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
L P N+L C S+ C+ +P D+G C G
Sbjct: 1249 LSQPAFSSPCNQLHC--SHLCLLAPAL---RPKSGTAGDQGTTAVCRCPKGML 1296
>gi|417414032|gb|JAA53318.1| Putative low-density lipoprotein receptor, partial [Desmodus
rotundus]
Length = 1932
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 92/212 (43%), Gaps = 31/212 (14%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C + SC G CI SW CDG
Sbjct: 808 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRSDEHSCSSGLCIRSSWVCDGD 867
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD ++DC D +DED
Sbjct: 868 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDVDCQ-----DGSDEDPT 920
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP--- 342
+ NG +C + CIP + CD DCS D +DE C P
Sbjct: 921 SCERKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ----------RCEPLCT 963
Query: 343 --NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + QC+ S CDG C +G DE
Sbjct: 964 RFMDFVCKNRQQCLFQSMVCDGIVQCRDGSDE 995
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 91/224 (40%), Gaps = 43/224 (19%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
CV+L CDG DC +G DE N P QF C G C+P WKCDG DC
Sbjct: 1024 CVSLVWKCDGTDDCGDGSDEASCENPTEAPNCSRYFQFQCENGHCVPSRWKCDGENDC-G 1082
Query: 233 DGSDEPN-----------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D SDE C +C+ S C+ W+CD DC+ D +D
Sbjct: 1083 DWSDEKGCGDSHTPPSPTPGPSTCPPNHYRCS-SGACVTGTWVCDGYRDCA-----DGSD 1136
Query: 282 EDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
E+ +C + +C KKCIP+ CD DC D DE
Sbjct: 1137 EEACPSPANVTAASTPTPLGRCDRFEFECHQPKKCIPNWKRCDGHRDCR-----DGQDEA 1191
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+H+ + C E RC C LS+ CDG DCS+ DE
Sbjct: 1192 --SCPTHSTLTCLSGEFRCEDGEACTLLSERCDGFLDCSDESDE 1233
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/226 (35%), Positives = 102/226 (45%), Gaps = 32/226 (14%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCG-MGKCIPESW 222
C ++ RC + N CV+ CD DC + DE C QF C G CIP S+
Sbjct: 765 CLRSQYRCSNGN-CVSSIWRCDLDNDCGDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 823
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
KCD DC D SDE + HQC + + C+ S CI +W+CD + DC D +DE
Sbjct: 824 KCDLEDDC-GDNSDESHCEAHQCRSDEHSCS-SGLCIRSSWVCDGDNDCR-----DWSDE 876
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+H C QC + CIP W CD ++DC D +DED C
Sbjct: 877 ANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDVDCQ-----DGSDED--------PTSC 922
Query: 341 HP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
N RC + C+ SK CDG DCS+G DE P C D
Sbjct: 923 ERKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQRCEPLCTRFMD 967
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 139/335 (41%), Gaps = 69/335 (20%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLCH 166
+E+ + G+ RS +V N+ P ++ + N+ +YW D S L+ + + GSH +L
Sbjct: 630 IERVTLSGQQRS-IVLDNLPHPYAVAVFKNE--IYWDDWSQLSIFRASKHSGSHVTLLAS 686
Query: 167 P----------NELRCGSSNQCVAL--SKFC------------------------DGKPD 190
+ + SN CV+ S C D + +
Sbjct: 687 QLTGLMDMKIFYKGKTVGSNACVSQPCSLLCLPRAEGHRSCRCPEGVSSTVLPSGDLRCE 746
Query: 191 CSNG-EDEGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
C G E C E C Q+ C G C+ W+CD DC D SDE N C
Sbjct: 747 CPRGYELRNDTCVKEENTCLRSQYRCSNGNCVSSIWRCDLDNDC-GDMSDERNCPTTICD 805
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ Q +C S CIP ++ CD E DC DN+DE + HQC + + C+ S CI
Sbjct: 806 LDTQFRCQESGTCIPLSYKCDLEDDCG-----DNSDESHCEAHQCRSDEHSCS-SGLCIR 859
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGK 363
+W+CD + DC DW + A+ C + +C + C+ CDG
Sbjct: 860 SSWVCDGDNDC----------RDWSDEANCTAIYHTCEASNFQC-HNGHCIPQRWACDGD 908
Query: 364 PDCSNGEDEGPF-CNNKADCENLKCSH-KCSPTPR 396
DC +G DE P C K C +C + C P+ +
Sbjct: 909 VDCQDGSDEDPTSCERK--CNGFRCPNGTCIPSSK 941
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG-----------PFCNAECTPGQFSCGMGKCIPESWKC 224
CV CDG+ DC + DE + C P + C G C+ +W C
Sbjct: 1066 GHCVPSRWKCDGENDCGDWSDEKGCGDSHTPPSPTPGPSTCPPNHYRCSSGACVTGTWVC 1125
Query: 225 DGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
DG+ DC DGSDE T + +C + +C KKCIP+ CD DC
Sbjct: 1126 DGYRDC-ADGSDEEACPSPANVTAASTPTPLGRCDRFEFECHQPKKCIPNWKRCDGHRDC 1184
Query: 272 STDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
D DE H C +G+ +C + C + CD +DCS
Sbjct: 1185 R-----DGQDEASCPTHSTLTCLSGEFRCEDGEACTLLSERCDGFLDCS 1228
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,548,921,004
Number of Sequences: 23463169
Number of extensions: 387478827
Number of successful extensions: 953478
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5196
Number of HSP's successfully gapped in prelim test: 7786
Number of HSP's that attempted gapping in prelim test: 734279
Number of HSP's gapped (non-prelim): 109952
length of query: 482
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 336
effective length of database: 8,933,572,693
effective search space: 3001680424848
effective search space used: 3001680424848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 79 (35.0 bits)