BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14262
(482 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein 2 OS=Mus musculus
GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 148 bits (374), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/329 (37%), Positives = 162/329 (49%), Gaps = 32/329 (9%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
C +L C S+ QCV + CD DC +G DE C Q +C G C S
Sbjct: 105 GTTCSSQQLTC-SNGQCVPIEYRCDHVSDCPDGSDERNCYYPTCD--QLTCANGACYNTS 161
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
KCD VDC D SDE N C C + QC S +CI ++CD + DC DN+D
Sbjct: 162 QKCDHKVDC-RDSSDEAN-CTTLCSQKEFQCG-SGECILRAYVCDHDNDCE-----DNSD 213
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHNAVLC 340
E + C Q C+ + +CI NW+CD + DC D+ DED + H+ C
Sbjct: 214 EHNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQRHHT--C 265
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTP 395
+P E C S +C+++ K CDG PDC GEDE G +C C L C ++C TP
Sbjct: 266 YPREWACPGSGRCISMDKVCDGVPDCPEGEDENNATSGRYCGTGL-CSILNCEYQCHQTP 324
Query: 396 RGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKS 452
G CFCP G N N ++ C+D D+C I G CDQ C + + C C EGY L G+
Sbjct: 325 YGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCESRQGRHQCLCEEGYILE-RGQH 383
Query: 453 CTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C + + ASIIFS+ D+ L+G
Sbjct: 384 CKSND--SFSAASIIFSNGRDLLVGDLHG 410
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/299 (35%), Positives = 142/299 (47%), Gaps = 23/299 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
CHP + RC ++C++ CDG DC +G DE C CT QF C G CI ++
Sbjct: 1150 CHPTQFRC-PDHRCISPLYVCDGDKDCVDGSDEAG-CVLNCTSSQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC +D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-KDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDC-----IQGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI ++W+CD + DC D+ D D + C
Sbjct: 1262 DEHNGCVPKTCSPSHFLCDNGNCIYNSWVCDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE-NLKCSHKCSPTPRGAM 399
++ +C + CV LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSSQWQCPGYSICVNLSALCDGVFDCPNGTDESPLCNQDSCLHFNGGCTHRCIQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CVCPIGYQLANDTKTCEDVNECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVT 1432
Score = 122 bits (307), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 159/367 (43%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C NE +C S ++C+ FCDG+ DC + DE C C+ QF C G+CI S
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRCISSS 2924
Query: 222 WKCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSK----KCIPHNWLCDEEMDCS--- 272
W CDG DC + D + + C + + C S+ +CIP +W+CD + DC+
Sbjct: 2925 WVCDGDNDCGDMSDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCADAL 2984
Query: 273 --------------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALS 300
+D D +DE + C + Q C +
Sbjct: 2985 DELQNCTMRACSTGEFSCANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQ-N 3043
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA-VLCHPNELRCGSSNQCVALSKF 359
+CI ++CDE+ DC D +DE ++ H C P++ RC + C+ +
Sbjct: 3044 GQCITKLYVCDEDNDCG-----DGSDEQ--EHLCHTPEPTCPPHQFRC-DNGHCIEMGTV 3095
Query: 360 CDGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDA 416
C+ DCS+ DE G N D C H C+ T C C G +K CVD
Sbjct: 3096 CNHVDDCSDNSDEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDI 3155
Query: 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C N SY+C C GY PDGKSC + EP ++FS+ IR
Sbjct: 3156 DECKETPQLCSQKCENVIGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LVFSNRYYIR 3212
Query: 476 RIHLNGS 482
+ ++G+
Sbjct: 3213 NLTIDGT 3219
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 69/356 (19%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIP 219
+ C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2821 ITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCVSPHRCIP 2880
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
W CDG DC+ D SDEP+TC H C Q C + +CI +W+CD + DC D+
Sbjct: 2881 SYWFCDGEADCV-DSSDEPDTCGHSLNSCSANQFHCD-NGRCISSSWVCDGDNDCG--DM 2936
Query: 277 VDNTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D + C + + C S ++CIP +W+CD + DC+ + D+
Sbjct: 2937 SDEDQRHHCELQNCSSTEFTCINSRPPNRRCIPQHWVCDGDADCA---------DALDEL 2987
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCNNKADCENLKC 387
+ C E C ++ +C+ S CD + DC + DE P +++ C+N +C
Sbjct: 2988 QNCTMRACSTGEFSC-ANGRCIRQSFRCDRRNDCGDYSDERGCSYPPCRDDQFTCQNGQC 3046
Query: 388 SHKC-----------SPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS------------ 424
K + +C P P D C+ G+
Sbjct: 3047 ITKLYVCDEDNDCGDGSDEQEHLCHTPEPTCPPHQFRCDNGHCIEMGTVCNHVDDCSDNS 3106
Query: 425 -----------------CDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
CD CT+T S+ CSC GY L D ++C ++ ++ P
Sbjct: 3107 DEKGCGINECQDSSISHCDHNCTDTITSFYCSCLPGYKLMSDKRTCVDIDECKETP 3162
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 151/376 (40%), Gaps = 78/376 (20%)
Query: 162 AVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V CHP+ + RCG+ + C+ L CDG DC + DE ECT +F C +CIP
Sbjct: 3718 SVPCHPSGDFRCGN-HHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCADQQCIPS 3776
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CD DC D SDE + + C QC S C+P CD DC +D +
Sbjct: 3777 RWVCDQENDC-GDNSDERDCEMKTCHPEHFQCT-SGHCVPKALACDGRADC-----LDAS 3829
Query: 281 DED-----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
DE + C +C + CI W+CD E DC VD +DE+ F
Sbjct: 3830 DESACPTRFPNGTYCPAAMFECK-NHVCIQSFWICDGENDC-----VDGSDEEIHLCF-- 3881
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--------------------- 374
N P RC +S +C+ + C+G DC +G DE
Sbjct: 3882 NVPCESPQRFRCDNS-RCIYGHQLCNGVDDCGDGSDEKEEHCRKPTHKPCTDTEYKCSNG 3940
Query: 375 -------FCNNKADCENLK-----------------CSHKCSPTPRGA-MCFCPAGQNP- 408
C+N DC +L C C+ G +C C G P
Sbjct: 3941 NCVSQHYVCDNVDDCGDLSDETGCNLGENRTCAEKICEQNCTQLSNGGFICSCRPGFKPS 4000
Query: 409 --NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPA 464
+K C D +EC G C Q+C N+ SY C C +G+ G+ C A P
Sbjct: 4001 TLDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGERCAA----DGSPP 4056
Query: 465 SIIFSSTVDIRRIHLN 480
++ V IR+ +++
Sbjct: 4057 LLLLPENVRIRKYNIS 4072
Score = 94.0 bits (232), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3513 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQA 3572
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + QCA +K+CIP W CD S DD +DN+
Sbjct: 3573 LCNARQDC-ADGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNS 3625
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE + +
Sbjct: 3626 DEDPSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIHECMTAAYN 3679
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3680 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 110/253 (43%), Gaps = 62/253 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ CD DC + DE P + C PGQF C G+CIP+SW
Sbjct: 3596 CEANEWQC-ANKRCIPEYWQCDSVDDCLDNSDEDPSHCASRTCRPGQFKCNNGRCIPQSW 3654
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNG--------QVQCALSKKCIPHNWLCDEEMDC--- 271
KCD DC D SDEP IH+C + C + +CIP +C+ DC
Sbjct: 3655 KCDVDNDC-GDYSDEP---IHECMTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDN 3710
Query: 272 --------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCAL 299
DD DN+DE+ +C + +CA
Sbjct: 3711 SDEQGCESVPCHPSGDFRCGNHHCIPLRWKCDGIDDCGDNSDEESCVPRECTESEFRCA- 3769
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
++CIP W+CD+E DC DN+DE CHP +C +S CV +
Sbjct: 3770 DQQCIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALA 3818
Query: 360 CDGKPDCSNGEDE 372
CDG+ DC + DE
Sbjct: 3819 CDGRADCLDASDE 3831
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 104/219 (47%), Gaps = 21/219 (9%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWKCDGFVDCLE 232
++ +CV CD DC + DE C + +F+C G+CIP S+ C+G +C +
Sbjct: 2750 ANGRCVPYHYRCDFYNDCGDNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHD 2809
Query: 233 -DGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQ 289
D SDE N C +C + C+P +LCD + DC D +DE+ + H
Sbjct: 2810 NDTSDEKNCPPITCQPDFAKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT 2864
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C + + QC +CIP W CD E DC VD++DE H+ C N+ C
Sbjct: 2865 CRSNEFQCVSPHRCIPSYWFCDGEADC-----VDSSDE--PDTCGHSLNSCSANQFHC-D 2916
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ +C++ S CDG DC + DE + + CE CS
Sbjct: 2917 NGRCISSSWVCDGDNDCGDMSDE----DQRHHCELQNCS 2951
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 136/326 (41%), Gaps = 55/326 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +++ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGSNREVVISTAFH---SFGLTVYGQYIYWTDFYTKKIYRANKYDGSDLIAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQQQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGSWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C A C QF+C G+CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGARCNQFQFTCLNGRCISQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 A-NGRCVPYHYRCDFYNDCG-----DNSDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPITCQPDFAKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPFCNNKADCEN--LKC--SHKCSPT 394
P C + +C H+C P+
Sbjct: 2856 NPIYCASHTCRSNEFQCVSPHRCIPS 2881
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+C++ CD DC +G DE P A C F+C G+C+P ++CD + DC D
Sbjct: 2712 RCISQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCANGRCVPYHYRCDFYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE C
Sbjct: 2771 SDEAGCLFRSCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPITCQPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S ++C+
Sbjct: 2828 AKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCVSPHRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCN--------NKADCENLKC 387
FCDG+ DC + DE C N+ C+N +C
Sbjct: 2880 PSYWFCDGEADCVDSSDEPDTCGHSLNSCSANQFHCDNGRC 2920
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 133/337 (39%), Gaps = 88/337 (26%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N++ +++ I+WP+++ IDY D+LYW D+HL +E ++G H
Sbjct: 3348 IARIGMDGTNKTVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGH------HR 3401
Query: 168 NELRCGSSNQCVALSKFCD---------------GKPDCSN-----GEDEGPFCNAECTP 207
+ + G+ AL+ F D K D S PF P
Sbjct: 3402 HTVYDGTLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVLHP 3461
Query: 208 GQFSCGMGKCIPESWKCD----------GFV-DCLEDGSD----EPNTCIHQCFNGQVQC 252
+ C + C GF +C +D + C+ C + Q C
Sbjct: 3462 YRQPIMSNPCATNNGGCSHLCLIKAGGRGFTCECPDDFQTVQLRDRTLCMPMCSSTQFLC 3521
Query: 253 ALSKKCIPHNWLCDEEMDCS-----------------------------------TDDIV 277
++KCIP W CD + DCS D
Sbjct: 3522 GNNEKCIPIWWKCDGQKDCSDGSDESDLCPHRFCRLGQFQCRDGNCTSPQALCNARQDCA 3581
Query: 278 DNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DED + H+C + QCA +K+CIP W CD S DD +DN+DED S
Sbjct: 3582 DGSDEDRVLCEHHRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNSDEDPSHCASR 3635
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P + +C ++ +C+ S CD DC + DE
Sbjct: 3636 T---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 3668
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSGQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCGSGFFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 317
IP +W+CD++ DCS D DE + C + Q+ C+ + +C+P + CD DC
Sbjct: 81 IPSSWVCDQDKDCS-----DGADEQQNCPGTTCSSQQLTCS-NGQCVPIEYRCDHVSDCP 134
Query: 318 TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 -----DGSDERNCYYPTCDQLTC--------ANGACYNTSQKCDHKVDCRDSSDEA 177
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS L + N+ WP+ L IDY N D +YW DS + +ES++ DG+ ++
Sbjct: 4211 KIESAWMNGEHRSVLASANLGWPNGLSIDYLNGDRIYWSDSKEDVIESIKYDGTDRRLI 4269
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 121/329 (36%), Gaps = 51/329 (15%)
Query: 76 NVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVID 135
N S+ + A L+ W PA ++ +A G + P+V ++ WP+ L ID
Sbjct: 826 NPRSIVVHPAAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGLAID 877
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 195
++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 878 WSTSRLYWVDAFFDKIEHSNLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FLTDW 930
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF-- 246
G + G + + I + L+ G++ PN C H CF
Sbjct: 931 RLGAIIRVRKSDGGDMTVVRRGISSIMHVKAYDADLQTGTNYCSQTTHPNGDCSHFCFPV 990
Query: 247 -NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
N Q C C L ++M C D + + QC + C + KC+P
Sbjct: 991 PNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSSSFPCN-NGKCVP 1039
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+ CD DD DN+DE ++ C + C QC+ CD + D
Sbjct: 1040 SIFRCD-----GVDDCHDNSDEHQCGALNNT---CSSSAFTCVHGGQCIPGQWRCDKQND 1091
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSPT 394
C +G DE +C S C PT
Sbjct: 1092 CLDGSDE-------QNCPTRSPSSTCPPT 1113
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKLGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGQNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +A+++ N F+ + + +R+ LL S D+P +
Sbjct: 2146 NGIRGVAVDWVAGNLYFTNAFVYETLIEVIRINTTYRRVLLKVSVDMPRHIVVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAVDHDTGYIYWVDDSLDIIARIHRD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVL 164
+R+E A + G R L+T + P+++ ++ +++W D +ES ++G H +VL
Sbjct: 4166 QRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVL 4225
Query: 165 CHPN 168
N
Sbjct: 4226 ASAN 4229
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A M G + L T N++ + +D + LYW + +E VDG+ +L H
Sbjct: 1900 KIASANMDGTSLKILFTGNMEHLEVVTLDIQEQKLYWAVTSRGVIERGNVDGTERMILVH 1959
Score = 37.0 bits (84), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L+ + A +G ++ + + + +D+ +YW D L T+E ++DGSH V
Sbjct: 1487 LEGKTWSAFQNGTDKRVVHDSGLSLTEMIAVDWIGRNIYWTDYTLETIEVSKIDGSHRTV 1546
Query: 164 LCHPN 168
L N
Sbjct: 1547 LISKN 1551
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
H C + + QC +CIP W CD E DC VD++DE
Sbjct: 2863 HTCRSNEFQCVSPHRCIPSYWFCDGEADC-----VDSSDE 2897
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + H+ S TP G + A + PN T + +G C Q C +H
Sbjct: 627 NKFTDTNPQVYHQSSLTPFGVTVY-HALRQPNATNPCGNN----NGGCAQICVLSHRTDN 681
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L Y C C G+ L D C AV ++FSS +R I
Sbjct: 682 GGLGYRCKCEFGFELDADEHHCVAVK------NFLLFSSQTAVRGI 721
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
H+C + QCA +K+CIP W CD S DD +DN+DED
Sbjct: 3594 HRCEANEWQCA-NKRCIPEYWQCD-----SVDDCLDNSDED 3628
>sp|P98164|LRP2_HUMAN Low-density lipoprotein receptor-related protein 2 OS=Homo sapiens
GN=LRP2 PE=1 SV=3
Length = 4655
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/325 (36%), Positives = 158/325 (48%), Gaps = 29/325 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +++ C S+ QC+ CD DC +G DE C Q +C G C S KC
Sbjct: 108 CSSHQITC-SNGQCIPSEYRCDHVRDCPDGADENDCQYPTCE--QLTCDNGACYNTSQKC 164
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
D VDC D SDE N C C + + C + +CIP ++CD + DC D +DE
Sbjct: 165 DWKVDC-RDSSDEIN-CTEICLHNEFSCG-NGECIPRAYVCDHDNDCQ-----DGSDEHA 216
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
+ C Q C S +CI NW+CD E DC DN DED + H+ C P E
Sbjct: 217 CNYPTCGGYQFTCP-SGRCIYQNWVCDGEDDCK-----DNGDEDGCESGPHDVHKCSPRE 270
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPFCNNKADCENLKCSHKCSPTPRGAM 399
C S +C+++ K CDG DC EDE G +C+ C L C ++C TP G
Sbjct: 271 WSCPESGRCISIYKVCDGILDCPGREDENNTSTGKYCSMTL-CSALNCQYQCHETPYGGA 329
Query: 400 CFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456
CFCP G N CV+ D+C I G CDQ C + ++C C EGY L G+ C A
Sbjct: 330 CFCPPGYIINHNDSRTCVEFDDCQIWGICDQKCESRPGRHLCHCEEGYILE-RGQYCKAN 388
Query: 457 NVPQDEPASIIFSSTVDIRRIHLNG 481
+ + ASIIFS+ D+ ++G
Sbjct: 389 DSFGE--ASIIFSNGRDLLIGDIHG 411
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 118/308 (38%), Positives = 143/308 (46%), Gaps = 41/308 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P++ C +++C+ LS CDG DC +G DE C CT QF C G KCI + +
Sbjct: 1149 CQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDEVG-CVLNCTASQFKCASGDKCIGVTNR 1206
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + + QC CIP+ W CD DC + +
Sbjct: 1207 CDGVFDC-SDNSDEAGCPTRPPGMCHSDEFQCQEDGICIPNFWECDGHPDC-----LYGS 1260
Query: 281 DED--------WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
DE + C NG CI WLCD + DC D +DE K
Sbjct: 1261 DEHNACVPKTCPSSYFHCDNGN--------CIHRAWLCDRDNDCG-----DMSDE---KD 1304
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-NKADCENLKCSHKC 391
C + +C N CV LS CDG DC NG DE P CN N N C+H+C
Sbjct: 1305 CPTQPFRCPSWQWQCLGHNICVNLSVVCDGIFDCPNGTDESPLCNGNSCSDFNGGCTHEC 1364
Query: 392 SPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA C CP G N +KT C D DEC I GSC Q C N S+ CSC GY L
Sbjct: 1365 VQEPFGAKCLCPLGFLLANDSKT-CEDIDECDILGSCSQHCYNMRGSFRCSCDTGYMLES 1423
Query: 449 DGKSCTAV 456
DG++C
Sbjct: 1424 DGRTCKVT 1431
Score = 126 bits (316), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/412 (28%), Positives = 165/412 (40%), Gaps = 112/412 (27%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSCGMGKCIPESW 222
C +C +SN C+ CDG DC + DE P +C C+ +F C G+CIP+ W
Sbjct: 2822 CQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDENPTYCTTHTCSSSEFQCASGRCIPQHW 2881
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CD DC D SDEP +C H C + +C +CIP W+CD + DC D
Sbjct: 2882 YCDQETDCF-DASDEPASCGHSERTCLADEFKCD-GGRCIPSEWICDGDNDCG-----DM 2934
Query: 280 TDEDWDKFHQCFN-----GQVQCA----LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 329
+DE DK HQC N + C ++CIP +W+CD ++DC+ D DE+
Sbjct: 2935 SDE--DKRHQCQNQNCSDSEFLCVNDRPPDRRCIPQSWVCDGDVDCT-----DGYDENQN 2987
Query: 330 -------DKYFSHNAVLCHPNELRCGSSN--------------------------QCVAL 356
+ F+ LC P RC N +C++
Sbjct: 2988 CTRRTCSENEFTCGYGLCIPKIFRCDRHNDCGDYSDERGCLYQTCQQNQFTCQNGRCISK 3047
Query: 357 SKFCDGKPDCSNGEDE---------------------------GPFCNNKADCEN----- 384
+ CD DC +G DE CN+ DC +
Sbjct: 3048 TFVCDEDNDCGDGSDELMHLCHTPEPTCPPHEFKCDNGRCIEMMKLCNHLDDCLDNSDEK 3107
Query: 385 ------------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECL-IDGSCDQTC 429
C H C+ T C C G +K CVD DEC + C Q C
Sbjct: 3108 GCGINECHDPSISGCDHNCTDTLTSFYCSCRPGYKLMSDKRTCVDIDECTEMPFVCSQKC 3167
Query: 430 TNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
N SY+C C GY PDGK+C + EP +IFS+ +R + ++G
Sbjct: 3168 ENVIGSYICKCAPGYLREPDGKTCRQNS--NIEPY-LIFSNRYYLRNLTIDG 3216
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/214 (33%), Positives = 105/214 (49%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+C + C ++ +C+ + CDG+ DCS+G DE C C GQF C G C
Sbjct: 3511 MCSSTQFLCANNEKCIPIWWKCDGQKDCSDGSDELALCPQRFCRLGQFQCSDGNCTSPQT 3570
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ +C DGSDE H C + + QCA +K+CIP +W CD DC DN+
Sbjct: 3571 LCNAHQNC-PDGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNS 3623
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +CA + +CIP W CD + DC D++DE ++ S +
Sbjct: 3624 DEDSSHCASRTCRPGQFRCA-NGRCIPQAWKCDVDNDCG-----DHSDEPIEECMSSAHL 3677
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3678 CDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 110/228 (48%), Gaps = 23/228 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC-TPGQFSCGMGKCIPESWK 223
C P C ++ +CV S CD DC +G DE +C +F C +CIP +
Sbjct: 2741 CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEAGCLFRDCNATTEFMCNNRRCIPREFI 2799
Query: 224 CDGFVDCLEDG-SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
C+G +C ++ SDE N C +G +C S CIP +LCD + DC DN+DE
Sbjct: 2800 CNGVDNCHDNNTSDEKNCPDRTCQSGYTKCHNSNICIPRVYLCDGDNDCG-----DNSDE 2854
Query: 283 D--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
+ + H C + + QCA S +CIP +W CD+E DC D +DE H+ C
Sbjct: 2855 NPTYCTTHTCSSSEFQCA-SGRCIPQHWYCDQETDC-----FDASDE--PASCGHSERTC 2906
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+E +C +C+ CDG DC + DE + + C+N CS
Sbjct: 2907 LADEFKC-DGGRCIPSEWICDGDNDCGDMSDE----DKRHQCQNQNCS 2949
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 155/409 (37%), Gaps = 107/409 (26%)
Query: 41 DEDWDKYFKRILNGTH--TLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPA 98
D D F LNG H LA N + CF N + L W A
Sbjct: 3288 DARLDGLFVSDLNGGHRRMLAQHCVDANNTFCF---DNPRGLALHPQYGYLYWADWGHRA 3344
Query: 99 PEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSH----------- 147
+ + GM G N+S +++ ++WP+ + IDY D+LYW D+H
Sbjct: 3345 --------YIGRVGMDGTNKSVIISTKLEWPNGITIDYTNDLLYWADAHLGYIEYSDLEG 3396
Query: 148 ------------------------------LNTVESV-RVDGSHNAVLC----------- 165
TVE + DGS+ L
Sbjct: 3397 HHRHTVYDGALPHPFAITIFEDTIYWTDWNTRTVEKGNKYDGSNRQTLVNTTHRPFDIHV 3456
Query: 166 -HPNEL-----RCGSSNQCVALSKFCDGKPDCSNGEDEGP------------FCNAECTP 207
HP CG++N S C KP E P +C C+
Sbjct: 3457 YHPYRQPIVSNPCGTNNG--GCSHLCLIKPGGKGFTCECPDDFRTLQLSGSTYCMPMCSS 3514
Query: 208 GQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLC 265
QF C KCIP WKCDG DC DGSDE C + C GQ QC+ C LC
Sbjct: 3515 TQFLCANNEKCIPIWWKCDGQKDC-SDGSDELALCPQRFCRLGQFQCS-DGNCTSPQTLC 3572
Query: 266 DEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+ +C D +DED + H C + + QCA +K+CIP +W CD DC D
Sbjct: 3573 NAHQNCP-----DGSDEDRLLCENHHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----D 3621
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N+DED S C P + RC ++ +C+ + CD DC + DE
Sbjct: 3622 NSDEDSSHCASRT---CRPGQFRC-ANGRCIPQAWKCDVDNDCGDHSDE 3666
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 142/366 (38%), Gaps = 64/366 (17%)
Query: 165 CHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
CHP + RC ++ C+ L CDG+ DC + DE ECT +F C +CIP W
Sbjct: 3719 CHPVGDFRC-KNHHCIPLRWQCDGQNDCGDNSDEENCAPRECTESEFRCVNQQCIPSRWI 3777
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282
CD + DC D SDE + + C QC S C+ CD DC +D +DE
Sbjct: 3778 CDHYNDC-GDNSDERDCEMRTCHPEYFQCT-SGHCVHSELKCDGSADC-----LDASDEA 3830
Query: 283 ----DWDKFHQCFNGQVQCALSKKCIPHNW------------------------------ 308
+ C +C + CIP W
Sbjct: 3831 DCPTRFPDGAYCQATMFECK-NHVCIPPYWKCDGDDDCGDGSDEELHLCLDVPCNSPNRF 3889
Query: 309 -------LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+ E+ DD D TDE + C E +CG+ C+ CD
Sbjct: 3890 RCDNNRCIYSHEVCNGVDDCGDGTDETEEHCRKPTPKPCTEYEYKCGNG-HCIPHDNVCD 3948
Query: 362 GKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGA-MCFCPAGQNPN---KTQCVDA 416
DC + DE G + C C C+ G +C C AG N +T C+D
Sbjct: 3949 DADDCGDWSDELGCNKGKERTCAENICEQNCTQLNEGGFICSCTAGFETNVFDRTSCLDI 4008
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GKSCTAVNVPQDEPASIIFSSTVDI 474
+EC G+C Q C NT SY C C +G+T D GK C A + ++ V I
Sbjct: 4009 NECEQFGTCPQHCRNTKGSYECVCADGFTSMSDRPGKRCAA----EGSSPLLLLPDNVRI 4064
Query: 475 RRIHLN 480
R+ +L+
Sbjct: 4065 RKYNLS 4070
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 102/204 (50%), Gaps = 27/204 (13%)
Query: 177 QCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
+CV CDG DC + DE N C+ F+CG G+CIP W+CD DC+ DG
Sbjct: 1037 RCVPNYYLCDGVDDCHDNSDEQLCGTLNNTCSSSAFTCGHGECIPAHWRCDKRNDCV-DG 1095
Query: 235 SDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQC 290
SDE N H C + Q C + +CI NW+CD + DC D +DE + + C
Sbjct: 1096 SDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNSTETC 1149
Query: 291 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL-CHPNELRCGS 349
Q C + +CI +++CD + DC VD +DE VL C ++ +C S
Sbjct: 1150 QPSQFNCP-NHRCIDLSFVCDGDKDC-----VDGSDE-------VGCVLNCTASQFKCAS 1196
Query: 350 SNQCVALSKFCDGKPDCSNGEDEG 373
++C+ ++ CDG DCS+ DE
Sbjct: 1197 GDKCIGVTNRCDGVFDCSDNSDEA 1220
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 106/257 (41%), Gaps = 68/257 (26%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP++W
Sbjct: 3594 CDSNEWQC-ANKRCIPESWQCDTFNDCEDNSDEDSSHCASRTCRPGQFRCANGRCIPQAW 3652
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN------------------------------- 247
KCD DC D SDEP + H C N
Sbjct: 3653 KCDVDNDC-GDHSDEPIEECMSSAHLCDNFTEFSCKTNYRCIPKWAVCNGVDDCRDNSDE 3711
Query: 248 -----------GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
G +C + CIP W CD + DC DN+DE+ +C + +
Sbjct: 3712 QGCEERTCHPVGDFRCK-NHHCIPLRWQCDGQNDCG-----DNSDEENCAPRECTESEFR 3765
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
C ++++CIP W+CD DC DN+DE CHP +C +S CV
Sbjct: 3766 C-VNQQCIPSRWICDHYNDCG-----DNSDER-----DCEMRTCHPEYFQC-TSGHCVHS 3813
Query: 357 SKFCDGKPDCSNGEDEG 373
CDG DC + DE
Sbjct: 3814 ELKCDGSADCLDASDEA 3830
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP--NTCIHQCFNGQVQCALSKKCIPH 261
+C F C G+C+P + CDG DC D SDE T + C + C +CIP
Sbjct: 1025 QCGLFSFPCKNGRCVPNYYLCDGVDDC-HDNSDEQLCGTLNNTCSSSAFTCG-HGECIPA 1082
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFH---QCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
+W CD+ DC VD +DE H C + Q C + +CI NW+CD + DC
Sbjct: 1083 HWRCDKRNDC-----VDGSDEHNCPTHAPASCLDTQYTCD-NHQCISKNWVCDTDNDCG- 1135
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE ++ C P++ C +++C+ LS CDG DC +G DE
Sbjct: 1136 ----DGSDEK----NCNSTETCQPSQFNC-PNHRCIDLSFVCDGDKDCVDGSDE 1180
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 94/236 (39%), Gaps = 62/236 (26%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC F CG G CIP W+CDG DC +D +DE + C G +C +CIP++W
Sbjct: 27 ECDSAHFRCGSGHCIPADWRCDGTKDCSDD-ADEIGCAVVTCQQGYFKCQSEGQCIPNSW 85
Query: 264 L----------CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEE 313
+ DE DCS C + Q+ C+ + +CIP + CD
Sbjct: 86 VCDQDQDCDDGSDERQDCSQS--------------TCSSHQITCS-NGQCIPSEYRCDHV 130
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE- 372
DC D DE+ +Y + + C + C S+ CD K DC + DE
Sbjct: 131 RDCP-----DGADENDCQYPTCEQLTC--------DNGACYNTSQKCDWKVDCRDSSDEI 177
Query: 373 ---------------------GPFCNNKADCENLKCSHKCS-PTPRGAMCFCPAGQ 406
C++ DC++ H C+ PT G CP+G+
Sbjct: 178 NCTEICLHNEFSCGNGECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGR 233
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 118/302 (39%), Gaps = 51/302 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNA-- 162
+R+E++ + G +R +V + + + +YW D + + + DGS
Sbjct: 2573 QRIERSTLTGVDREVIVNAAVH---AFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAM 2629
Query: 163 ---VLCHPNELRCGSSNQ-------CVALSKFC-----------------DGKPDCSNGE 195
+L P + NQ C + C +G +N
Sbjct: 2630 TTNLLSQPRGINTVVKNQKQQCNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNR 2689
Query: 196 DEGPFCNAE-CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQC 252
N E C F+C G+CI E WKCD DC DGSDE + +H C C
Sbjct: 2690 KHCIVDNGERCGASSFTCSNGRCISEEWKCDNDNDC-GDGSDEMESVCALHTCSPTAFTC 2748
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
A + +C+ +++ CD DC D +DE F C +++CIP ++C+
Sbjct: 2749 A-NGRCVQYSYRCDYYNDCG-----DGSDEAGCLFRDCNATTEFMCNNRRCIPREFICNG 2802
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C ++ D + D+ C +C +SN C+ CDG DC + DE
Sbjct: 2803 VDNCHDNNTSDEKNCP-DR-------TCQSGYTKCHNSNICIPRVYLCDGDNDCGDNSDE 2854
Query: 373 GP 374
P
Sbjct: 2855 NP 2856
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C NE CG+ +C+ + CD DC +G DE C QF+C G+CI ++W
Sbjct: 182 ICLHNEFSCGNG-ECIPRAYVCDHDNDCQDGSDEHACNYPTCGGYQFTCPSGRCIYQNWV 240
Query: 224 CDGFVDCL----EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDG + +H+C + C S +CI +CD +DC + +N
Sbjct: 241 CDGEDDCKDNGDEDGCESGPHDVHKCSPREWSCPESGRCISIYKVCDGILDCPGREDENN 300
Query: 280 T 280
T
Sbjct: 301 T 301
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 106/277 (38%), Gaps = 44/277 (15%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A + G R P+V ++ PS L +DY +D+LYW D+ L +E + G V+ +
Sbjct: 2531 KIERATLGGNFRVPIVNSSLVMPSGLTLDYEEDLLYWVDASLQRIERSTLTGVDREVIVN 2590
Query: 167 PNELRCGSS--NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP-ESWK 223
G + Q + + + +N D G+ + + +
Sbjct: 2591 AAVHAFGLTLYGQYIYWTDLYTQRIYRANKYDGSGQIAMTTNLLSQPRGINTVVKNQKQQ 2650
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNG----QVQCALSKKCIPH--NW-LCDEEMDCSTDDI 276
C+ + G C H C G + QC PH NW L + C I
Sbjct: 2651 CNNPCEQFNGG------CSHICAPGPNGAECQC-------PHEGNWYLANNRKHC----I 2693
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
VDN + C NG +CI W CD + DC D +DE H
Sbjct: 2694 VDNGERCGASSFTCSNG--------RCISEEWKCDNDNDCG-----DGSDEMESVCALHT 2740
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
C P C ++ +CV S CD DC +G DE
Sbjct: 2741 ---CSPTAFTC-ANGRCVQYSYRCDYYNDCGDGSDEA 2773
Score = 55.8 bits (133), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 19/112 (16%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSW----DLPAPEIFPLDERL--------------EKAGM 113
I +V + R+ A+++ W DL P ++ +L E A M
Sbjct: 4156 IYWSDVKNKRIEVAKLDGRYRKWLISTDLDQPAAIAVNPKLGLMFWTDWGKEPKIESAWM 4215
Query: 114 HGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
+GE+R+ LV +++ WP+ L IDY N D +YW D + +E+++ DG+ V+
Sbjct: 4216 NGEDRNILVFEDLGWPTGLSIDYLNNDRIYWSDFKEDVIETIKYDGTDRRVI 4267
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +LE+A M G NR LV + WP+ + +D +YW DS + +E+V DG +
Sbjct: 535 EPKLERAFMDGSNRKDLVKTKLGWPAGVTLDMISKRVYWVDSRFDYIETVTYDGIQRKTV 594
Query: 165 CHPNEL 170
H L
Sbjct: 595 VHGGSL 600
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 55 THTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERL------ 108
T T+A+++ RN + + ++ + +L S +L P LD R+
Sbjct: 1511 TETIAIDWVGRNLYWTDYALETIEVSKIDGSH-RTVLISKNLTNPRGLALDPRMNEHLLF 1569
Query: 109 ----------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
E+A M G R+ +V I WP L IDY +LY+ DS+L+ ++ +G
Sbjct: 1570 WSDWGHHPRIERASMDGSMRTVIVQDKIFWPCGLTIDYPNRLLYFMDSYLDYMDFCDYNG 1629
Query: 159 SH-------NAVLCHPNEL 170
H + ++ HP L
Sbjct: 1630 HHRRQVIASDLIIRHPYAL 1648
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 104/294 (35%), Gaps = 47/294 (15%)
Query: 90 LLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
W PA ++ +A G + P++ + WP+ L ID+ LYW D++ +
Sbjct: 841 FFTDWFRPA--------KIMRAWSDGSHLLPVINTTLGWPNGLAIDWAASRLYWVDAYFD 892
Query: 150 TVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
+E DG L H ++ L+ F G+ G G
Sbjct: 893 KIEHSTFDGLDRRRLGHIEQM-----THPFGLAIF--GEHLFFTDWRLGAIIRVRKADGG 945
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSD------EPNT-CIHQCF---NGQVQCALSKKCI 259
+ I + ++ GS+ PN C H CF N Q C C
Sbjct: 946 EMTVIRSGIAYILHLKSYDVNIQTGSNACNQPTHPNGDCSHFCFPVPNFQRVCG----CP 1001
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKF-HQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
L + C D + E F C NG +C+P+ +LCD
Sbjct: 1002 YGMRLASNHLTCEGDPTNEPPTEQCGLFSFPCKNG--------RCVPNYYLCD-----GV 1048
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DD DN+DE ++ C + CG +C+ CD + DC +G DE
Sbjct: 1049 DDCHDNSDEQLCGTLNNT---CSSSAFTCGHG-ECIPAHWRCDKRNDCVDGSDE 1098
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/162 (18%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 23 WLCDEEMDCSTDDIVDNTDEDWDKYFKRIL-----NGTHTLALEFNHRNQSL--CFIQQQ 75
+ CD ++D+ + D + NG +A+++ N F+ +
Sbjct: 2110 YWCDFSSSVASDNAIRRIKPDGSSLMNIVTHGIGENGVRGIAVDWVAGNLYFTNAFVSET 2169
Query: 76 NVSSVRLRCAQINDLLN-SWDLPAPEI------------FPLDERLEKAGMHGENRSPLV 122
+ +R+ LL + D+P + + ++E++ + NR+ LV
Sbjct: 2170 LIEVLRINTTYRRVLLKVTVDMPRHIVVDPKNRYLFWADYGQRPKIERSFLDCTNRTVLV 2229
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++ I P L +D + +YW D L+ + +R++G ++ V+
Sbjct: 2230 SEGIVTPRGLAVDRSDGYVYWVDDSLDIIARIRINGENSEVI 2271
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A +G +R + +I ++ ID+ LYW D L T+E ++DGSH VL N
Sbjct: 1493 AFQNGTDRRVVFDSSIILTETIAIDWVGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1550
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 378 NKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH---- 433
NK N + ++ S P G + Q C D + G C+Q C +H
Sbjct: 628 NKFTETNPQVYYQASLRPYGVTVYHSLRQPYATNPCKDNN-----GGCEQVCVLSHRTDN 682
Query: 434 --LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
L + C CT G+ L D + C AV +IFSS V IR I
Sbjct: 683 DGLGFRCKCTFGFQLDTDERHCIAVQ------NFLIFSSQVAIRGI 722
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A M G + L T N++ + +D + LYW + +E VDG+ +L H
Sbjct: 1899 KIASANMDGTSVKTLFTGNLEHLECVTLDIEEQKLYWAVTGRGVIERGNVDGTDRMILVH 1958
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDC 31
H C + + QCA S +CIP +W CD+E DC
Sbjct: 2862 HTCSSSEFQCA-SGRCIPQHWYCDQETDC 2889
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/65 (20%), Positives = 35/65 (53%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
+ ++ ++G N ++ +++ P +L +D+ + +Y ++ +N ++ V +DGS+
Sbjct: 444 VQNKVFSVDINGLNIQEVLNVSVETPENLAVDWVNNKIYLVETKVNRIDMVNLDGSYRVT 503
Query: 164 LCHPN 168
L N
Sbjct: 504 LITEN 508
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
H C + + QCA +K+CIP +W CD DC DN+DED
Sbjct: 3592 HHCDSNEWQCA-NKRCIPESWQCDTFNDCE-----DNSDED 3626
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQN----PNKTQCV--DADECLIDGSCDQTC 429
CNN + N CSH C+P P GA C CP N N+ C+ + + C G+ TC
Sbjct: 2651 CNNPCEQFNGGCSHICAPGPNGAECQCPHEGNWYLANNRKHCIVDNGERC---GASSFTC 2707
Query: 430 TN 431
+N
Sbjct: 2708 SN 2709
>sp|Q04833|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis
elegans GN=lrp-1 PE=1 SV=1
Length = 4753
Score = 146 bits (368), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 111/307 (36%), Positives = 151/307 (49%), Gaps = 20/307 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGK-CIPES 221
C N+ C ++ +C+ + CDG DC +G DE +C+ QF C G+ C+P
Sbjct: 1187 CAANQFSC-ANGRCIPIYWLCDGDNDCYDGTDEDKERCPPVQCSALQFRCANGRQCVPLR 1245
Query: 222 WKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC EDGSDE + + C Q +C S CIP +W CD + DC DD D
Sbjct: 1246 NHCDGQSDC-EDGSDEDSCAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDC--DDGSDE 1302
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK--YFSHNA 337
QC + Q +C + +CI +NWLCD E DC D +DE ++ S NA
Sbjct: 1303 PKFGCTSGRQCSSDQFKCG-NGRCILNNWLCDGENDCG-----DGSDESSERGCKTSMNA 1356
Query: 338 VLCHPNELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTP 395
C + C + + C+ L + CDGK C G DEG C + CS KC +P
Sbjct: 1357 RKCPFEHVACENDQETCIPLHQLCDGKTHCPGGTDEGGRCARDLCSADRAGCSFKCHNSP 1416
Query: 396 RGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
G +C CP G Q NKT+C +ECL SC Q C + + CSC EGY L D ++C
Sbjct: 1417 NGPICSCPFGEQLVNKTKCEPENECLDSSSCSQRCKDEKHGFTCSCDEGYELDVDKRTCK 1476
Query: 455 AVNVPQD 461
+ +D
Sbjct: 1477 VADNVKD 1483
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 147/348 (42%), Gaps = 77/348 (22%)
Query: 150 TVESVRVDGSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNA 203
+V S + S N +C+ N+ RC + +C+ CDG DCS+GEDE P C +
Sbjct: 36 SVRSRIISASVNTASSVCNENDFRC-NDGKCIRTEWKCDGSGDCSDGEDEKDCPHPGCKS 94
Query: 204 --------------------------ECTPGQ-----------------FSCGMGK-CIP 219
+C G F C G+ C
Sbjct: 95 DQWQCDTYTWHSVSCIAEYQRCDNITDCADGSDEKDCPASTVDCSSQNVFMCADGRQCFD 154
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIH---QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
S KCDG DC D SDE ++C CF Q +CA +CI +W+CD DC+
Sbjct: 155 VSKKCDGKYDC-RDLSDEKDSCSRNHTACFQYQFRCADKTQCIQKSWVCDGSKDCA---- 209
Query: 277 VDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE D +F +C + QC +K+C P + CD DC DN+DED
Sbjct: 210 -DGSDEPDTCEFKKCTANEFQCK-NKRCQPRKFRCDYYDDCG-----DNSDED-----EC 257
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP 395
C P + C + C+ K CDG DC++G DE N C +L C C P+P
Sbjct: 258 GEYRCPPGKWNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNL--CPSLGCQAGCHPSP 315
Query: 396 RGAMCFCPAGQNPN---KTQCVDADECLIDGSCDQTCTNTHLSYVCSC 440
G C CP+G + C D +EC G CDQ C N + CSC
Sbjct: 316 HGGECTCPSGYKLDDRFHRTCSDINECAEFGYCDQLCANHRPGFTCSC 363
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/341 (29%), Positives = 152/341 (44%), Gaps = 41/341 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + +C+ SK CDG CS+G DE C PG C G CI E C
Sbjct: 3878 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDESQCTLRRCLPGHRQCDDGTCIAEHKWC 3936
Query: 225 DGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
D DC + +DE + C + +CA S CIP ++CD + DC DN+D
Sbjct: 3937 DRKKDC-PNAADELHCEDVSRRTCSPFEFECANSV-CIPRKFMCDGDNDCG-----DNSD 3989
Query: 282 EDWDKFHQCFNGQ------VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E +C + Q +CA S+ C+ LC+ DC +D D + +
Sbjct: 3990 E---TSSECRSAQCDPPLRFRCAHSRLCLNILQLCNGFNDCGPNDFSDEHLSMCSSFSEY 4046
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------GPFCNNKADCENLKCSH 389
C ++ +C ++ +CV + CD K DC + DE G + +A N C H
Sbjct: 4047 GD--CSSDQFKC-ANGKCVNGTVACDRKDDCGDASDEIGCSKHGGKTSCEAFGNNGGCKH 4103
Query: 390 KCSPTPRGAMCFCPAGQNPNK---TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-- 444
C+ G C C G P+ +C+D DEC + +C Q C NT SY+C C E Y
Sbjct: 4104 ICTDVRDGFYCHCRDGFRPDPQSPKECIDIDECAGNNTCTQLCLNTKGSYLCRCHEDYEN 4163
Query: 445 ---TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
GK C A + + A+++ + + ++ L+GS
Sbjct: 4164 NVVVGSMTGKDCRA----KGDAANVMIGADDSLVQLSLHGS 4200
Score = 103 bits (256), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 110/223 (49%), Gaps = 30/223 (13%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC----NAECTPGQFSCGMGKCIP 219
C N ++C ++ +C+ CDG DC + DE +C C +F C +CIP
Sbjct: 1101 CAENTIKCRNTKKCIPAQYGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIP 1160
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTD 274
E WKCD DC DGSDE + C N Q CA + +CIP WLCD + DC
Sbjct: 1161 EQWKCDSDNDC-GDGSDEK---LEMCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC--- 1212
Query: 275 DIVDNTDEDWDK--FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D TDED ++ QC Q +CA ++C+P CD + DC D +DED
Sbjct: 1213 --YDGTDEDKERCPPVQCSALQFRCANGRQCVPLRNHCDGQSDCE-----DGSDED---S 1262
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
+ A C P++ +C SS C+ S CDG+ DC +G DE F
Sbjct: 1263 CAVTAESCTPDQFKCVSSGLCIPASWKCDGQQDCDDGSDEPKF 1305
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 144/336 (42%), Gaps = 74/336 (22%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE---CTPGQFSCGM 214
+ NA L P +C+ + CDG C+ GEDE C E C G+F C
Sbjct: 3057 TSNAKLAQPKY-------ECIPRAWLCDGDVTCAGGEDESTELCKTEKKECNKGEFRCSN 3109
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
CI +W+CDG DCL DGSDE C + C QCA + KC+P++W CD DC
Sbjct: 3110 QHCIHSTWECDGDNDCL-DGSDEHANCTYSSCQPDFFQCA-NHKCVPNSWKCDGNDDC-- 3165
Query: 274 DDIVDNTD-----EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+D D D K +C NGQ QC S +CI +CD DC+ D +DE
Sbjct: 3166 EDGSDEKDCPKNSASAQKASKCSNGQFQCT-SGECIDDAKVCDRNFDCT-----DRSDE- 3218
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS 388
+ LC +E CS E P C K C ++K
Sbjct: 3219 --------SSLCFIDE---------------------CSLAEK--PLCEQK--CMDMKIG 3245
Query: 389 HKCSPTPRGAMCF-CPAGQNPNKTQCVDADECL--IDGSCDQTCTNTHLSYVCSCTEGYT 445
+KC CF A ++ C + +EC I G C Q C + SY C C +GY
Sbjct: 3246 YKCD-------CFEGFAIDISDQKSCHNVNECYEGISG-CSQKCDDKIGSYKCGCVDGYQ 3297
Query: 446 LRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
L D SC + + EP + ++ IR+I ++G
Sbjct: 3298 LSSDDHSCKRTEM-EPEPF-FLLANKHYIRKISIDG 3331
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 93/214 (43%), Gaps = 63/214 (29%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDE----PNTCIH--QCFNGQVQCALSKKCIPHN 262
QF C G+CIP+ WKCDG DCL D SDE + C H +C ++C +KKCIP
Sbjct: 1060 QFQCKNGRCIPKEWKCDGENDCL-DESDEIDEKGDKCFHETECAENTIKCRNTKKCIPAQ 1118
Query: 263 WLCDEEMDC---------------------------------------STDDIVDNTDED 283
+ CD + DC S +D D +DE
Sbjct: 1119 YGCDGDNDCGDYSDEDVKYCKDGQKPVCAAKKFQCDNHRCIPEQWKCDSDNDCGDGSDE- 1177
Query: 284 WDKFHQCFNG-----QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
K C N Q CA + +CIP WLCD + DC D TDED ++ V
Sbjct: 1178 --KLEMCGNATCAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDEDKERC---PPV 1226
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + RC + QCV L CDG+ DC +G DE
Sbjct: 1227 QCSALQFRCANGRQCVPLRNHCDGQSDCEDGSDE 1260
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 107/213 (50%), Gaps = 17/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE---CTPGQFSCGMGKCIPE 220
C P +C ++ +C+ CDG DC + DE C + CT +F C KCI +
Sbjct: 3709 CDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCNNNKCIAK 3768
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
+W+CD DC + + P +C G +C+ S +CIP+ C+ + DC DN+
Sbjct: 3769 AWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCR-----DNS 3823
Query: 281 DEDWDKFHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
DED + C + G+ +CA S KCIP W+CD E DC DN+DE D
Sbjct: 3824 DEDKQRCPTCDDVGEFRCATSGKCIPRRWMCDTENDCG-----DNSDE-LDASCGGTTRP 3877
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E RC + +C+ SK CDG CS+G DE
Sbjct: 3878 CSESEFRC-NDGKCIPGSKVCDGTIQCSDGLDE 3909
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 167 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFS-CGMGKCIPESWKC 224
P +CG + C+ L CD KPDC++ DE P +CN P ++ C +CI + KC
Sbjct: 2795 PYNFQCGDGS-CILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKC 2853
Query: 225 DGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+ DC DGSDE + C G C+ + CI +CD DC + + D +
Sbjct: 2854 NHIDDC-GDGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDESLAT 2911
Query: 284 WDKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C +V+C + CI LCD DC D DE ++ F N C
Sbjct: 2912 CPGLPIDCRGVKVRCPNTNICIQPADLCDGYDDCG-----DKADE--NQLFCMNQ-QCAQ 2963
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +RC S +C+ + CDG DCS+G DE
Sbjct: 2964 HYVRC-PSGRCIPETWQCDGDNDCSDGWDE 2992
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 104/251 (41%), Gaps = 54/251 (21%)
Query: 165 CHPNELRCGSSN-QCVALSKFCDGKPDCSNGEDE--GPFCNAECTP-GQFSCGMGKCIPE 220
C + CG + +C+ +CDG+PDC +G DE C P G+F C C
Sbjct: 3627 CTERQFACGGDDAKCIPKLWYCDGEPDCRDGSDEPGESICGQRICPVGEFQCTNHNCTRP 3686
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW----------------- 263
CDG DC D SDE N C C +CA + +CIP +
Sbjct: 3687 FQICDGNDDC-GDSSDEQN-CDKACDPWMFKCAATGRCIPRRFTCDGDDDCGDRSDEADT 3744
Query: 264 LC-DEEMDCSTDDIVDNTD----EDWDKFH-----------------QCFNGQVQCALSK 301
LC E +C+ ++ N + + W + +C G +C+ S
Sbjct: 3745 LCMSAERNCTAEEFRCNNNKCIAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSY 3804
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CIP+ C+ + DC DN+DED + + + V E RC +S +C+ CD
Sbjct: 3805 RCIPNWAFCNGQDDCR-----DNSDEDKQRCPTCDDV----GEFRCATSGKCIPRRWMCD 3855
Query: 362 GKPDCSNGEDE 372
+ DC + DE
Sbjct: 3856 TENDCGDNSDE 3866
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 14/122 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ T +AL++ RN + L + LL ++ P +D R
Sbjct: 1554 LDITEGIALDWVGRNLYWVDSSLNTIEVANLEDPKQRTLLVHQNVSQPRGIAVDPRKGVM 1613
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+E+A M G +R +V I WP+++ +DY D +Y+ DS L+ ++ V D
Sbjct: 1614 FWTDWGQNPCIERASMDGTDRQIIVKTKIYWPNTIALDYTTDRVYFADSKLDFIDFVNYD 1673
Query: 158 GS 159
GS
Sbjct: 1674 GS 1675
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 16/192 (8%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
P F CG G CI CD DC + + PN C + +++CI C+
Sbjct: 2795 PYNFQCGDGSCILLGATCDSKPDCADASDENPNYCNTRSCPEDYNLCTNRRCIDSAKKCN 2854
Query: 267 EEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 325
DC D +DE D C G C+ + CI +CD DC + + D +
Sbjct: 2855 HIDDCG-----DGSDELDCPSAVACAEGTFPCS-NGHCINQTKVCDGHNDCHDEQVSDES 2908
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
+ C ++RC ++N C+ + CDG DC + DE N+ C N
Sbjct: 2909 LATCPGL----PIDCRGVKVRCPNTNICIQPADLCDGYDDCGDKADE-----NQLFCMNQ 2959
Query: 386 KCSHKCSPTPRG 397
+C+ P G
Sbjct: 2960 QCAQHYVRCPSG 2971
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 140/392 (35%), Gaps = 113/392 (28%)
Query: 95 DLPAPEIFPLDERLEKAGMH---GENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
D + +F D L + G G R + + SS+V+ D LYW D +L V
Sbjct: 3490 DYFSDRLFWGDAHLNEIGFMDFDGNGRRHIPAQRTSHVSSMVV--FDDYLYWADWNLREV 3547
Query: 152 ESVRVD---GSHNAVLCH----PNELR-------------CGSSN--------------- 176
+R D G + +L PN+LR CG +N
Sbjct: 3548 --LRCDKWTGKNETILKKTVQLPNDLRIVHPMRQPAYPNPCGDNNGGCSHLCLIGAGGNG 3605
Query: 177 -------QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
Q V LS +P+C+ + +A+C P + W CDG D
Sbjct: 3606 YTCSCPDQFVLLSDQKTCEPNCTERQFACGGDDAKCIP------------KLWYCDGEPD 3653
Query: 230 CLEDGSDEPNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
C DGSDEP I C G+ QC + C +CD DC N D+ D
Sbjct: 3654 C-RDGSDEPGESICGQRICPVGEFQCT-NHNCTRPFQICDGNDDCGDSSDEQNCDKACDP 3711
Query: 287 FHQCFNGQVQCALSKKCIPHNW-----------------LC-DEEMDCSTDDIVDNTDED 328
+ +CA + +CIP + LC E +C+ ++ N ++
Sbjct: 3712 W------MFKCAATGRCIPRRFTCDGDDDCGDRSDEADTLCMSAERNCTAEEFRCNNNKC 3765
Query: 329 WDKYFSHNA----------------VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
K + + + C RC SS +C+ FC+G+ DC + DE
Sbjct: 3766 IAKAWRCDNDDDCGDGSDETPECAQIECKKGWTRCSSSYRCIPNWAFCNGQDDCRDNSDE 3825
Query: 373 G----PFCNNKADCENLKCSHKCSPTPRGAMC 400
P C+ D +C+ PR MC
Sbjct: 3826 DKQRCPTCD---DVGEFRCATSGKCIPRRWMC 3854
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E++ + G +R +V+++I P+++ +D+ +YW D + +E DG + V+
Sbjct: 2601 RIERSNLAGGSRKVIVSESISLPAAIAVDFRNQKIYWADVNRLNIEVADYDGQNRKVI 2658
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%)
Query: 96 LPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
L F +LE A M G NR LV + S +V+D +YW D ++ +ES+
Sbjct: 524 LRGEMFFTNQLKLEAAAMDGTNRRTLVNTHTHQVSGIVVDITAKRVYWVDPKVDRLESID 583
Query: 156 VDGSHNAVLCH 166
G+ ++
Sbjct: 584 YQGNDRRIVAQ 594
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQ-DILYWCDSHLNTVESVRVDGSHNA 162
L ++E A M G +R +V + P+S+ ID + + +YW D V++V +DGS
Sbjct: 4352 LHAKIECADMDGTHRQIIVKDLVFSPTSMAIDEGKGNRIYWVDPKYRRVDAVNIDGSERT 4411
Query: 163 VLCHPNEL 170
+ H +
Sbjct: 4412 TVVHDRHI 4419
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
L ++ WP+++ IDY D L+W D+HLN + + DG
Sbjct: 3476 LAEHDLGWPNAIAIDYFSDRLFWGDAHLNEIGFMDFDG 3513
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
++++ + G R +V+ I P+ LV+D ++YW D+ ++ + VR G
Sbjct: 2273 IQRSFLDGSRREVIVSSGIAEPTDLVVDVASKMIYWSDAKMDGIYRVRSTGG 2324
Score = 39.7 bits (91), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 88 NDLLNSWDLPAPEIFPLDERLEK---AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWC 144
N + +WD I+ D R +K A +G N + + + + +D+ LYW
Sbjct: 1513 NAIALAWDSLTDRIYWSDIREKKILSANRNGTNATVFIADGLDITEGIALDWVGRNLYWV 1572
Query: 145 DSHLNTVESVRV-DGSHNAVLCHPN 168
DS LNT+E + D +L H N
Sbjct: 1573 DSSLNTIEVANLEDPKQRTLLVHQN 1597
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 5/35 (14%)
Query: 8 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
G+ +CA S KCIP W+CD E DC DN+DE
Sbjct: 3837 GEFRCATSGKCIPRRWMCDTENDCG-----DNSDE 3866
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVL 164
+E + + G R L+T + PSS+ +D LYW D T++ +DGS V+
Sbjct: 2229 IEVSKLDGTYRKILLTTKTETPSSIAVDPVSRYLYWADQGQKPTIQRSFLDGSRREVI 2286
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 95/255 (37%), Gaps = 63/255 (24%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNH 64
C Q CA + +CIP WLCD + DC D TDED K AL+F
Sbjct: 1187 CAANQFSCA-NGRCIPIYWLCDGDNDC-----YDGTDED-----KERCPPVQCSALQFRC 1235
Query: 65 RNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSP---- 120
N C +R C +D + D + + E+ +P
Sbjct: 1236 ANGRQCV-------PLRNHCDGQSDCEDGSD------------EDSCAVTAESCTPDQFK 1276
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVA 180
V+ + P+S D QD CD + + G + C ++ +CG+ +C+
Sbjct: 1277 CVSSGLCIPASWKCDGQQD----CDDGSDEPKF----GCTSGRQCSSDQFKCGNG-RCIL 1327
Query: 181 LSKFCDGKPDCSNGEDEG--------------PFCNAECTPGQFSCGMGKCIPESWKCDG 226
+ CDG+ DC +G DE PF + C Q + CIP CDG
Sbjct: 1328 NNWLCDGENDCGDGSDESSERGCKTSMNARKCPFEHVACENDQET-----CIPLHQLCDG 1382
Query: 227 FVDCLEDGSDEPNTC 241
C G+DE C
Sbjct: 1383 KTHC-PGGTDEGGRC 1396
>sp|Q91ZX7|LRP1_MOUSE Prolow-density lipoprotein receptor-related protein 1 OS=Mus musculus
GN=Lrp1 PE=1 SV=1
Length = 4545
Score = 145 bits (365), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 156/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 986 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1044
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + + QC L CIP W CD + DC +D++DE
Sbjct: 1045 SDETHANCTNQATRPPGGCHSDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1099
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + A+ C P
Sbjct: 1100 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCEALACRPP 1149
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDGK DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1150 SHPCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1208
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G + C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1209 CPLGMELGSDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1268
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1269 K---PFIIFSNRHEIRRIDLH 1286
Score = 132 bits (331), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 23 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCPPNE 77
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEG C +A+C + C H C PTP G C+C
Sbjct: 78 HSCLGTELCVPMSRLCNGIQDCMDGSDEGAHCRELRANCSRMGCQHHCVPTPSGPTCYCN 137
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S+ C C EGY L+PD +SC A N P
Sbjct: 138 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFTCGCVEGYLLQPDNRSCKAKNEPV 196
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 197 DRPPVLLIANSQNILATYLSGA 218
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/344 (33%), Positives = 164/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2727 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2785
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNT--CIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE T C++ C + + C ++ CIP +++CD + D
Sbjct: 2786 HVCVPERWLCDGDKDCT-DGADESVTAGCLYNSTCDDREFMCQ-NRLCIPKHFVCDHDRD 2843
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D++DE
Sbjct: 2844 CA-----DGSDESPECEYPTCGPNEFRCANGRCLSSRQWECDGENDCH-----DHSDE-- 2891
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC +G DE N+
Sbjct: 2892 ----APKNPHCTSPEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDGSDERGCHVNECLS 2947
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2948 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADLDECSTTFPCSQLCINTHGSYKCL 3007
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3008 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3048
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/369 (29%), Positives = 152/369 (41%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3537 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3595
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3596 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3646
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3647 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3694
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE P C +K + C N +
Sbjct: 3695 ICPPNRPFRCKNDRVCLWIGRQCDGVDNCGDGTDEEDCEPPTAQNPHCKDKKEFLCRNQR 3754
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3755 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASMCGDEARCVRTEKAAYCACRSGF 3814
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3815 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3874
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3875 DDNEIRSLF 3883
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3344 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3402
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3403 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3457
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3458 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3508
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3509 IPARWKCDGEDDCGDGSDE 3527
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C + +C +N+C+ CDG DC N EDE C+A C P QFSC G+CIP SW
Sbjct: 896 CPSDRFKC-ENNRCIPNRWLCDGDNDCGNSEDESNATCSARTCPPNQFSCASGRCIPISW 954
Query: 223 KCDGFVDCLEDGSDEPNTCIH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC D SDE +C + CF + +CI NW CD + DC DN+D
Sbjct: 955 TCDLDDDC-GDRSDESASCAYPTCFPLTQFTCNNGRCININWRCDNDNDCG-----DNSD 1008
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E H C + Q +C S +CIP +W CD + DC D D T + + CH
Sbjct: 1009 EA-GCSHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCH 1064
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSP 393
+E +C C+ L CDG DC + DE CE + +H C P
Sbjct: 1065 SDEFQCRLDGLCIPLRWRCDGDTDCMDSSDE-------KSCEGV--THVCDP 1107
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2575 NNGRCVSNMLWCNGVDDCGDGSDEIPCNKTACGVGEFRCRDGSCIGNSSRCNQFVDC-ED 2633
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2634 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2691
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2692 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCENGE-----DE------THCNKFCSEAQ 2739
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2740 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2774
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 706 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 764
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 765 SVYRLERGVAGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 824
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 825 SRQCACAEDQVLDTDGVTCLANPSYVPPPQCQPGEFACANNRCIQERWKCDGDNDCLDNS 884
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 885 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 940
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 941 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 990
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 991 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1019
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 679 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 738
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 739 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVAGAPPTVTLLRSERPPIFEIRM 795
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 796 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDTDG-VTCLANPSYVPPP- 853
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA + +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 854 --QCQPGEFACA-NNRCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 904
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 905 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 955
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 956 CDLDDDCGDRSDESASC 972
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4026 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4082
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3171 IGRIGMDGSGRSIIVDTKITWPNGLTVDYVTERIYWADAREDYIEFASLDGSNRHVV 3227
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ ++ +E + ++ N
Sbjct: 2033 RIERSRLDGTERVVLVNVSISWPNGISVDYQGGKLYWCDARMDKIERIDLETGEN 2087
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + SC G C+
Sbjct: 28 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCPPNEHSCLGTELCV 87
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 88 PMSRLCNGIQDCM-DGSDEGAHC 109
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V
Sbjct: 2355 LHPSIMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYV 2414
Query: 164 L 164
+
Sbjct: 2415 I 2415
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC + +C+ + C+
Sbjct: 2530 EFECANGECISFSLTCDGVSHCKDKSDEKPSYCNSRRCKKTFRQCN-NGRCVSNMLWCN- 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DD D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ----GVDDCGDGSDEIPCNKTACGVGEFRCR-DGSCIGNSSRCNQFVDCEDASDEMNCSA 2642
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2643 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2686
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 348 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 405
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1407 WDASLP-------RIEAASMSGAGRRTIHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1459
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1460 YSARYDGSGHMEVLRGHEF 1478
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 48 FKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN----DLLNSWDLPAPEIFP 103
K+ LN + +AL+F++R Q + + S+ +R +N +L+ L P+
Sbjct: 3053 LKQGLN--NAVALDFDYREQMIYWTDVTTQGSM-IRRMHLNGSNVQVLHRTGLSNPDGLA 3109
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D + +E + ++G R+ LV+ ++ P +LV+D LYW D +
Sbjct: 3110 VDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHS 3169
Query: 150 TVESVRVDGSHNAVL 164
+ + +DGS +++
Sbjct: 3170 LIGRIGMDGSGRSII 3184
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEG C
Sbjct: 70 AQRCPPNEHSCLGTELCVPMSRLCNGIQDCMDGSDEGAHC 109
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 79/213 (37%), Gaps = 55/213 (25%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + Q +C S +CIP +W CD + DC D D T + R G H+ EF
Sbjct: 1014 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHS--DEF 1068
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
R LC +R RC D ++S DE+ + H
Sbjct: 1069 QCRLDGLCI-------PLRWRCDGDTDCMDS----------SDEKSCEGVTH-------- 1103
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV-DGSHN-----------AVLCHPNEL 170
V D N + + C + V DG + A+ C P
Sbjct: 1104 ----------VCDPN--VKFGCKDSARCISKAWVCDGDSDCEDNSDEENCEALACRPPSH 1151
Query: 171 RCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C +++ C+ K CDGK DC +G DEG C+
Sbjct: 1152 PCANNTSVCLPPDKLCDGKDDCGDGSDEGELCD 1184
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QC+++K+CIP W+CD + DC VD +DE
Sbjct: 3454 CAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDE 3486
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLP-APEIFPLDERL 108
L H LA+++ RN ++ ++ RL + N ++ + P + PL +L
Sbjct: 1658 LPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVVQGLEQPHGLVVHPLRGKL 1717
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G N + L + + P L ID+ + LYW S +T+ +DGS
Sbjct: 1718 YWTDGDNISMANMDGSNHTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGSE 1776
Query: 161 NAVL 164
V+
Sbjct: 1777 LEVI 1780
>sp|P98165|VLDLR_CHICK Very low-density lipoprotein receptor OS=Gallus gallus GN=VLDLR
PE=1 SV=1
Length = 863
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 174/376 (46%), Gaps = 71/376 (18%)
Query: 157 DGS-HNAVLCH-----PNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ 209
DGS +A LCH NE+ CG S QC+ +S CDG+ DC +GEDE N C+ +
Sbjct: 117 DGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCGNVTCSAAE 176
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
F+C G+CI +S+ C+G DC DGSDE C + QC S CIP +W+CD++
Sbjct: 177 FTCSSGQCISKSFVCNGQDDC-SDGSDELECAPPTCGVHEFQCK-SSTCIPISWVCDDDA 234
Query: 270 DCS--TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DCS +D+ ++ +C +VQC S +CI W CD + DC D +DE
Sbjct: 235 DCSDHSDESLEQCGRQPAPPVKCSTSEVQCG-SGECIHKKWRCDGDPDCK-----DGSDE 288
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP--- 374
+ + C P++ RC N C+ S+ C+G DC +G DE GP
Sbjct: 289 -----INCPSRTCRPDQFRCEDGN-CIHGSRQCNGVRDCLDGTDEANCNNVIQCSGPGKF 342
Query: 375 ------------FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPA 404
CN+ DC+ N CSH C G C CPA
Sbjct: 343 KCRSGECIDINKVCNHHGDCKDWSDEPLKECNINECLVNNGGCSHICRDLVIGYECDCPA 402
Query: 405 G-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463
G + ++ C D DEC G C Q C N Y C C+ GY + C AV EP
Sbjct: 403 GFELVDRRTCGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP 459
Query: 464 ASIIFSSTVDIRRIHL 479
+IF++ DIR+I L
Sbjct: 460 C-LIFTNRRDIRKIGL 474
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 114/247 (46%), Gaps = 48/247 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C S+ +C+ L CDG DCS+G DE C F C G+C+P W+C
Sbjct: 51 CEESQFQC-SNGRCIPLLWKCDGDEDCSDGSDESACVKKTCAESDFVCNSGQCVPNRWQC 109
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE H C ++ C S +CIP +W CD E DC +
Sbjct: 110 DGDPDC-EDGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSGEDEENCG 168
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC S CIP +
Sbjct: 169 NVTCSAAEFTCSSGQCISKSFVCNGQDDCSDGSDELECAPPTCGVHEFQCK-SSTCIPIS 227
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNA--VLCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D++DE ++ A V C +E++CG S +C+ CDG PD
Sbjct: 228 WVCDDDADCS-----DHSDESLEQCGRQPAPPVKCSTSEVQCG-SGECIHKKWRCDGDPD 281
Query: 366 CSNGEDE 372
C +G DE
Sbjct: 282 CKDGSDE 288
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 85/173 (49%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
A+C QF C G+CIP WKCDG DC DGSDE C C S +C+P+
Sbjct: 49 AKCEESQFQCSNGRCIPLLWKCDGDEDC-SDGSDESACVKKTCAESDFVCN-SGQCVPNR 106
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCA-LSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE + H C ++ C S +CIP +W CD E DC +
Sbjct: 107 WQCDGDPDCE-----DGSDESAELCHMRTCRVNEISCGPQSTQCIPVSWKCDGEKDCDSG 161
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C E C SS QC++ S C+G+ DCS+G DE
Sbjct: 162 EDEENC----------GNVTCSAAEFTC-SSGQCISKSFVCNGQDDCSDGSDE 203
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 50 RILNGTHT---LALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD- 105
RIL+ H+ +A+++ ++N + +S L + L S +L P +D
Sbjct: 527 RILDNIHSPAGIAVDWIYKNIYWTDSSAKTISVASLNGKKRKVLFLS-ELREPASIAVDP 585
Query: 106 -------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE 152
++EKAGM+G +R LVT IQWP+ + +D + LYW DS L+ +
Sbjct: 586 LSGFMYWSDWGEPAKIEKAGMNGFDRQQLVTTEIQWPNGIALDLVKSRLYWLDSKLHMLS 645
Query: 153 SVRVDGSHNAVL 164
SV ++G ++
Sbjct: 646 SVDLNGQDRRLV 657
>sp|P98158|LRP2_RAT Low-density lipoprotein receptor-related protein 2 OS=Rattus
norvegicus GN=Lrp2 PE=1 SV=1
Length = 4660
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/332 (35%), Positives = 163/332 (49%), Gaps = 38/332 (11%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNAECTPGQFSCGMGKC 217
C ++ C S+ QC+ CD DC +G DE P C+ Q +C G C
Sbjct: 105 GTTCSAQQMTC-SNGQCIPSEYRCDHVSDCPDGSDERNCHYPTCD------QLTCANGAC 157
Query: 218 IPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
S +CD VDC D SDE N C C + +C S +CI ++CD + DC
Sbjct: 158 YNTSQRCDQKVDC-RDSSDEAN-CTTLCSQKEFECG-SGECILRAYVCDHDNDCE----- 209
Query: 278 DNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-DKYFSHN 336
DN+DE + C Q C+ + +CI NW+CD + DC D+ DED + SH+
Sbjct: 210 DNSDERNCNYDTCGGHQFTCS-NGQCINQNWVCDGDDDCQ-----DSGDEDGCESNQSHH 263
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK----ADCENLKCSHKCS 392
C+P E C S +C+++ K CDG PDC G+DE + + C L C ++C
Sbjct: 264 R--CYPREWACPGSGRCISIDKVCDGVPDCPEGDDENNVTSGRTCGMGVCSVLNCEYQCH 321
Query: 393 PTPRGAMCFCPAGQ--NPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
TP G CFCP G N N ++ C+D D+C I G CDQ C N + C C EGY L
Sbjct: 322 QTPFGGECFCPPGHIINSNDSRTCIDFDDCQIWGICDQKCENRQGRHQCLCEEGYILE-R 380
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
G+ C + + AS+IFS+ D+ L+G
Sbjct: 381 GQHCKSSD--SFSAASVIFSNGRDLLVGDLHG 410
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 143/312 (45%), Gaps = 25/312 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESWK 223
C P + RC ++C++ CDG DC++G DE C CT QF C G CI ++
Sbjct: 1150 CQPTQFRC-PDHRCISPLYVCDGDKDCADGSDEAG-CVLNCTSAQFKCADGSSCINSRYR 1207
Query: 224 CDGFVDCLEDGSDE---PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
CDG DC D SDE P C + QC CIP+ W CD DC + +
Sbjct: 1208 CDGVYDC-RDNSDEAGCPTRPPGMCHPDEFQCQGDGTCIPNTWECDGHPDC-----IHGS 1261
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + + + CI W+CD + DC D+ D D + C
Sbjct: 1262 DEHTGCVPKTCSPTHFLCDNGNCIYKAWICDGDNDCR--DMSDEKDCPTQPFH------C 1313
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAM 399
+ +C + C+ LS CDG DC NG DE P CN + N C+H+C P GA
Sbjct: 1314 PSTQWQCPGYSTCINLSALCDGVFDCPNGTDESPLCNQDSCSHFNGGCTHQCMQGPFGAT 1373
Query: 400 CFCPAG-QNPNKTQ-CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
C CP G Q N T+ C D +EC I G C Q C N S+ C+C YTL DG++C
Sbjct: 1374 CLCPLGYQLANDTKTCEDINECDIPGFCSQHCVNMRGSFRCACDPEYTLESDGRTCKVTG 1433
Query: 458 VPQDEPASIIFS 469
+ P ++ S
Sbjct: 1434 --SENPLLVVAS 1443
Score = 129 bits (323), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 165/410 (40%), Gaps = 105/410 (25%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAE-CTPGQFSC-GMGKCIPES 221
C P+ +C ++N CV + CDG DC +G DE P +C + C +F C +CIP
Sbjct: 2823 CPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDENPIYCASHTCRSNEFQCLSPQRCIPSY 2882
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 278
W CDG DC DGSDEP+TC H C Q QC + +CI NW+CD + DC D+ D
Sbjct: 2883 WFCDGEADC-ADGSDEPDTCGHSVNTCRASQFQCD-NGRCISGNWVCDGDNDCG--DMSD 2938
Query: 279 NTDEDWDKFHQCFNGQVQCALS----KKCIPHNWLCDEEMDCS----------------- 317
+ C + Q C S ++CIP W+CD + DCS
Sbjct: 2939 EDQRHHCELQNCSSTQFTCVNSRPPNRRCIPQYWVCDGDADCSDALDELQNCTMRTCSAG 2998
Query: 318 ------------------TDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+D D +DE Y CH N+ C + +C+
Sbjct: 2999 EFSCANGRCVRQSFRCDRRNDCGDYSDERGCSYPP-----CHANQFTC-QNGRCIPRFFV 3052
Query: 360 CDGKPDCSNGEDE---------------------------GPFCNNKADCEN-------- 384
CD DC +G DE G CN+ DC +
Sbjct: 3053 CDEDNDCGDGSDEQEHLCHTPEPTCPLHQFRCDNGHCIEMGRVCNHVDDCSDNSDEKGCG 3112
Query: 385 ---------LKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGS-CDQTCTNT 432
+C H C+ T C C G +K CVD DEC C Q C N
Sbjct: 3113 INECLDSSISRCDHNCTDTITSFYCSCLPGYKLMSDKRSCVDIDECKESPQLCSQKCENV 3172
Query: 433 HLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
SY+C C GY PDGKSC + EP +IFS+ IR + +GS
Sbjct: 3173 VGSYICKCAPGYIREPDGKSCRQNS--NIEPY-LIFSNRYYIRNLTTDGS 3219
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 139/325 (42%), Gaps = 30/325 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + QC+ CD + DC + DE C P F C G C+P++ C
Sbjct: 3761 CSESEFRC-ADQQCIPSRWVCDQENDCGDNSDERDCEMKTCHPEHFQCTSGHCVPKALAC 3819
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-----SKKCIPHNWLCDEEMDCSTDDIVDN 279
DG DCL D SDE + C + NG A + CI W+CD E DC VD
Sbjct: 3820 DGRADCL-DASDE-SACPTRFPNGTYCPAAMFECKNHVCIQSFWICDGENDC-----VDG 3872
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE+ H CFN + +C + ++ DD D +DE +
Sbjct: 3873 SDEE---IHLCFNIPCESPQRFRCDNSRCVYGHQLCNGVDDCGDGSDEKEEHCRKPTHKP 3929
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCNNKADCENLKCSHKCSPTPRG 397
C E +C + N C++ CD DC + DE +N+ EN+ C C+ G
Sbjct: 3930 CTDTEYKCSNGN-CISQHYVCDNVNDCGDLSDETGCNLGDNRTCAENI-CEQNCTQLSSG 3987
Query: 398 A-MCFCPAGQNP---NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD--GK 451
+C C G P +K C D +EC G C Q+C N+ SY C C +G+ G+
Sbjct: 3988 GFICSCRPGFKPSTSDKNSCQDINECEEFGICPQSCRNSKGSYECFCVDGFKSMSTHYGE 4047
Query: 452 SCTAVNVPQDEPASIIFSSTVDIRR 476
C A P ++ V IR+
Sbjct: 4048 RCAA----DGSPPLLLLPENVRIRK 4068
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 107/214 (50%), Gaps = 18/214 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESW 222
+C + CG++ +C+ + CDG+ DCS+G DE C + C GQF C G C
Sbjct: 3513 MCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSPQA 3572
Query: 223 KCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+ DC DGSDE H+C + + QCA +K+CIP +W CD DC +DN+
Sbjct: 3573 LCNARQDC-ADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNS 3625
Query: 281 DEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
DED C GQ +C + +CIP +W CD + DC D +DE D+ +
Sbjct: 3626 DEDTSHCASRTCRPGQFKCN-NGRCIPQSWKCDVDNDCG-----DYSDEPIDECTTAAYN 3679
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ E C ++ +C+ C+G DC + DE
Sbjct: 3680 CDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 111/250 (44%), Gaps = 56/250 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCGMGKCIPESW 222
C NE +C ++ +C+ S CD DC + DE + C PGQF C G+CIP+SW
Sbjct: 3596 CESNEWQC-ANKRCIPQSWQCDSVNDCLDNSDEDTSHCASRTCRPGQFKCNNGRCIPQSW 3654
Query: 223 KCDGFVDCLEDGSDEP----NTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDC------ 271
KCD DC D SDEP T + C N + C + +CIP +C+ DC
Sbjct: 3655 KCDVDNDC-GDYSDEPIDECTTAAYNCDNHTEFSCKTNYRCIPQWAVCNGFDDCRDNSDE 3713
Query: 272 -----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
TDD DN+DE+ +C + +CA ++
Sbjct: 3714 QGCESVPCHPSGDFRCANHHCIPLRWKCDGTDDCGDNSDEENCVPRECSESEFRCA-DQQ 3772
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
CIP W+CD+E DC DN+DE CHP +C +S CV + CDG
Sbjct: 3773 CIPSRWVCDQENDCG-----DNSDER-----DCEMKTCHPEHFQC-TSGHCVPKALACDG 3821
Query: 363 KPDCSNGEDE 372
+ DC + DE
Sbjct: 3822 RADCLDASDE 3831
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 14/207 (6%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ CD DC +G DE P A C F+CG G+C+P ++CD + DC D
Sbjct: 2712 HCINQDWKCDNDNDCGDGSDELPTVCAFHTCRSTAFTCGNGRCVPYHYRCDYYNDC-GDN 2770
Query: 235 SDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294
SDE C + + +CIP +++C+ +C + D +DE H C
Sbjct: 2771 SDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNGINNCHDN---DTSDEKNCPPHTCPPDF 2827
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + C+P +LCD + DC D +DE+ SH C NE +C S +C+
Sbjct: 2828 TKCQTTNICVPRAFLCDGDNDCG-----DGSDENPIYCASHT---CRSNEFQCLSPQRCI 2879
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNNKAD 381
FCDG+ DC++G DE C + +
Sbjct: 2880 PSYWFCDGEADCADGSDEPDTCGHSVN 2906
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 131/347 (37%), Gaps = 73/347 (21%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIPE 220
C P+ C QC+ CD + DC +G DE ++ C F+C CIP+
Sbjct: 1066 CSPSAFACVRGGQCIPGQWHCDRQNDCLDGSDEQNCPTHATSSTCPSTSFTCDNHVCIPK 1125
Query: 221 SWKCDGFVDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
W CD DC DGSDE N C Q +C +CI ++CD + DC+ D
Sbjct: 1126 DWVCDTDNDC-SDGSDEKNCQASGTCQPTQFRCP-DHRCISPLYVCDGDKDCA-----DG 1178
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVL 339
+DE + C + Q +CA CI + CD DC DN+DE + +
Sbjct: 1179 SDEAGCVLN-CTSAQFKCADGSSCINSRYRCDGVYDCR-----DNSDEAGCP--TRPPGM 1230
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP------------------------F 375
CHP+E +C C+ + CDG PDC +G DE
Sbjct: 1231 CHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAWI 1290
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCV------------------- 414
C+ DC ++ C P CP+ Q P + C+
Sbjct: 1291 CDGDNDCRDMSDEKDCPTQP----FHCPSTQWQCPGYSTCINLSALCDGVFDCPNGTDES 1346
Query: 415 ---DADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+ D C +G C C C C GY L D K+C +N
Sbjct: 1347 PLCNQDSCSHFNGGCTHQCMQGPFGATCLCPLGYQLANDTKTCEDIN 1393
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 80/175 (45%), Gaps = 19/175 (10%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKC 258
P + EC G F C G CIP SW+CDG DCL+D +DE C +G C C
Sbjct: 22 PVSSQECGSGNFRCDNGYCIPASWRCDGTRDCLDD-TDEIGCPPRSCESGLFLCPAEGTC 80
Query: 259 IPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 318
IP +W+CDE+ DCS D DE + + Q + +CIP + CD DC
Sbjct: 81 IPSSWVCDEDKDCS-----DGADEQQNCAGTTCSAQQMTCSNGQCIPSEYRCDHVSDCP- 134
Query: 319 DDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
D +DE Y + + + C ++ C S+ CD K DC + DE
Sbjct: 135 ----DGSDERNCHYPTCDQLTC--------ANGACYNTSQRCDQKVDCRDSSDEA 177
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 123/303 (40%), Gaps = 51/303 (16%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV-RVDGSHNAVL 164
+++E++ + G NR +V+ S + +YW D + + + DGS +
Sbjct: 2574 QKIERSTLTGTNREVVVSTAFH---SFGLTVYGQYIYWTDLYTRKIYRANKYDGSDLVAM 2630
Query: 165 C-----HPNELRCGSSNQCVALSKFCDG-KPDCSNGEDEGP------------------- 199
P+ + Q S CD CS+ GP
Sbjct: 2631 TTRLPTQPSGISTVVKTQRQQCSNPCDQFNGGCSHICAPGPNGAECQCPHEGNWYLANDN 2690
Query: 200 -FC----NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC 252
+C C QF+C G CI + WKCD DC DGSDE P C H C + C
Sbjct: 2691 KYCVVDTGTRCNQLQFTCLNGHCINQDWKCDNDNDC-GDGSDELPTVCAFHTCRSTAFTC 2749
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDE 312
+ +C+P+++ CD DC DN+DE F C + + +CIP +++C+
Sbjct: 2750 G-NGRCVPYHYRCDYYNDCG-----DNSDEAGCLFRNCNSTTEFTCSNGRCIPLSYVCNG 2803
Query: 313 EMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +D D + C P+ +C ++N CV + CDG DC +G DE
Sbjct: 2804 INNCHDNDTSDEKN--------CPPHTCPPDFTKCQTTNICVPRAFLCDGDNDCGDGSDE 2855
Query: 373 GPF 375
P
Sbjct: 2856 NPI 2858
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSCGMGKCIPESW 222
+CHP+E +C C+ + CDG PDC +G DE C + C+P F C G CI ++W
Sbjct: 1230 MCHPDEFQCQGDGTCIPNTWECDGHPDCIHGSDEHTGCVPKTCSPTHFLCDNGNCIYKAW 1289
Query: 223 KCDGFVDC--LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CDG DC + D D P H C + Q QC CI + LCD DC
Sbjct: 1290 ICDGDNDCRDMSDEKDCPTQPFH-CPSTQWQCPGYSTCINLSALCDGVFDC 1339
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 129/348 (37%), Gaps = 110/348 (31%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDIL-------------------------- 141
+ + GM G N+S +++ I+WP+++ IDY D+L
Sbjct: 3348 IGRIGMDGTNKSVIISTKIEWPNAITIDYTNDLLYWADAHLGYIEFSDLEGHHRHTVYDG 3407
Query: 142 ---------------YWCDSHLNTVESV-RVDGSHNAVLCH----PNELRCGSSNQCVAL 181
+W D + TVE + DGS VL + P ++ + +
Sbjct: 3408 SLPHPFALTIFEDTVFWTDWNTRTVEKGNKYDGSGRVVLVNTTHKPFDIHVYHPYRQPIM 3467
Query: 182 SKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241
S C G + G C+ C G P+ ++ D C
Sbjct: 3468 SNPC--------GTNNGG-CSHLCLIKAGGRGFTCACPDDFQTVQLRD--------RTLC 3510
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS----------------------------- 272
+ C + Q C ++KCIP W CD + DCS
Sbjct: 3511 MPMCSSTQFLCGNNEKCIPIWWKCDGQKDCSDGSDEPDLCPHRFCRLGQFQCRDGNCTSP 3570
Query: 273 ------TDDIVDNTDEDWD--KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D D +DED + H+C + + QCA +K+CIP +W CD DC +DN
Sbjct: 3571 QALCNARQDCADGSDEDRVLCEHHRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDN 3624
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+DED S C P + +C ++ +C+ S CD DC + DE
Sbjct: 3625 SDEDTSHCASRT---CRPGQFKC-NNGRCIPQSWKCDVDNDCGDYSDE 3668
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDY-NQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E A M+GE+RS LV++N+ WP+ L IDY N D +YW DS + +E+++ DG+ ++
Sbjct: 4211 KIESAWMNGEHRSVLVSENLGWPNGLSIDYLNDDRVYWSDSKEDVIEAIKYDGTDRRLI 4269
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 135/370 (36%), Gaps = 52/370 (14%)
Query: 13 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI 72
K+ I N L E ++C T D + D K + L L R Q + +
Sbjct: 771 GTGKEVITANRL--ESVECLTFDWISRNLYWTDGGLKSVT----VLRLADKSRRQIISNL 824
Query: 73 QQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSL 132
N S+ + L+ W PA ++ +A G + P+V ++ WP+ L
Sbjct: 825 N--NPRSIVVHPTAGYMFLSDWFRPA--------KIMRAWSDGSHLMPIVNTSLGWPNGL 874
Query: 133 VIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 192
ID++ LYW D+ + +E +DG L H +++ L+ F D
Sbjct: 875 AIDWSASRLYWVDAFFDKIEHSTLDGLDRKRLGHVDQM-----THPFGLTVFKDNV--FI 927
Query: 193 NGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD-------EPNTCIHQC 245
G + G + + I + L+ GS+ C H C
Sbjct: 928 TDWRLGAIIRVRKSDGGDMTVIRRGISSVMHVKAYDADLQTGSNYCSQTTHANGDCSHFC 987
Query: 246 F---NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKK 302
F N Q C C L ++M C D + + QC + C + K
Sbjct: 988 FPVPNFQRVCG----CPYGMKLQRDQMTCEGDPAREPPTQ------QCGSLSFPCN-NGK 1036
Query: 303 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDG 362
C+P + CD DD DN+DE F++ C P+ C QC+ CD
Sbjct: 1037 CVPSFFRCD-----GVDDCHDNSDEHQCGVFNNT---CSPSAFACVRGGQCIPGQWHCDR 1088
Query: 363 KPDCSNGEDE 372
+ DC +G DE
Sbjct: 1089 QNDCLDGSDE 1098
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+A M G NR LVT + WP+ + +D +YW DS + +E+V DG +
Sbjct: 536 KVERAFMDGSNRKDLVTTKVGWPAGITLDLVSKRVYWVDSRYDYIETVTYDGIQRKTVAR 595
Query: 167 PNEL 170
L
Sbjct: 596 GGSL 599
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ ++E+A + G R P+V ++ WP+ L +D D+LYW D+ L +E + G++ V+
Sbjct: 2530 NAKIERATLGGNFRVPIVNTSLVWPNGLALDLETDLLYWADASLQKIERSTLTGTNREVV 2589
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG-------S 159
R+E+A M G R+ +V + I WP L IDY ++Y+ D++L+ +E DG +
Sbjct: 1579 RIERASMDGTMRTVIVQEKIYWPCGLSIDYPNRLIYFMDAYLDYIEFCDYDGHNRRQVIA 1638
Query: 160 HNAVLCHPNEL 170
+ VL HP+ L
Sbjct: 1639 SDLVLHHPHAL 1649
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 53 NGTHTLALEFNHRNQSL--CFIQQQNVSSVRLRCAQINDLLN-SWDLPAPEI-------- 101
NG +AL++ N F+ + + +R+ LL S D+P I
Sbjct: 2146 NGIRGVALDWAAGNLYFTNAFVYETLIEVLRINTTYRRVLLKVSVDMPRHIIVDPKHRYL 2205
Query: 102 ----FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
+ ++E++ + NR+ LV++ I P L +D++ +YW D L+ + + +D
Sbjct: 2206 FWADYGQKPKIERSFLDCTNRTVLVSEGIVTPRGLAMDHDTGYIYWVDDSLDLIARIHLD 2265
Query: 158 GSHNAVL 164
G + V+
Sbjct: 2266 GGESQVV 2272
Score = 38.9 bits (89), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVL 164
+R+E A + G R L+T + P+++ ++ +++W D +ES ++G H +VL
Sbjct: 4166 QRIEVATLDGRYRKWLITTQLDQPAAIAVNPKLGLMFWTDQGKQPKIESAWMNGEHRSVL 4225
Query: 165 CHPN 168
N
Sbjct: 4226 VSEN 4229
Score = 38.9 bits (89), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++ A M G + L T N+Q + +D + LYW + +E VDG+ +L H
Sbjct: 1900 KIASANMDGTSLKILFTGNLQHLEVVTLDIQEQKLYWAVTSRGVIERGNVDGTERMILVH 1959
Score = 35.8 bits (81), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%)
Query: 132 LVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+ +D+ LYW D L T+E ++DGSH VL N
Sbjct: 1515 IAVDWIGRNLYWTDYALETIEVSKIDGSHRTVLISKN 1551
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 6/41 (14%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
H+C + + QCA +K+CIP +W CD DC +DN+DED
Sbjct: 3594 HRCESNEWQCA-NKRCIPQSWQCDSVNDC-----LDNSDED 3628
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCS 32
H C + + QC ++CIP W CD E DC+
Sbjct: 2863 HTCRSNEFQCLSPQRCIPSYWFCDGEADCA 2892
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 17/100 (17%)
Query: 384 NLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH------LSYV 437
N + H+ S P G + A + PN T ++ +G C Q C +H L Y
Sbjct: 633 NPQVYHQSSLRPHGVTVY-HALRQPNATNPCGSN----NGGCAQVCVLSHRTDNGGLGYR 687
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
C C G+ L D C AV ++FSS +R I
Sbjct: 688 CKCEFGFELDDDEHRCVAVK------NFLLFSSKTAVRGI 721
Score = 33.1 bits (74), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Query: 376 CNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGS--CDQ---TCT 430
C+N D N CSH C+P P GA C CP N D C++D C+Q TC
Sbjct: 2652 CSNPCDQFNGGCSHICAPGPNGAECQCP--HEGNWYLANDNKYCVVDTGTRCNQLQFTCL 2709
Query: 431 NTH 433
N H
Sbjct: 2710 NGH 2712
>sp|Q07954|LRP1_HUMAN Prolow-density lipoprotein receptor-related protein 1 OS=Homo sapiens
GN=LRP1 PE=1 SV=2
Length = 4544
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 155/321 (48%), Gaps = 34/321 (10%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIPE W CDG DC +
Sbjct: 985 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSTQFKCNSGRCIPEHWTCDGDNDCGDY 1043
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-- 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1044 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPLRWRCDGDTDC-----MDSSDEKSCE 1098
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C + + C S +CI W+CD + DC DN+DE+ + ++ C P
Sbjct: 1099 GVTHVCDPSVKFGCKDSARCISKAWVCDGDNDCE-----DNSDEE-----NCESLACRPP 1148
Query: 344 ELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C + ++ C+ K CDG DC +G DEG C+ + N CSH CS P G +C
Sbjct: 1149 SHPCANNTSVCLPPDKLCDGNDDCGDGSDEGELCD-QCSLNNGGCSHNCSVAPGEGIVCS 1207
Query: 402 CPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459
CP G P+ C C C Q C S CSC EG+ L PDG+SC +++
Sbjct: 1208 CPLGMELGPDNHTCQIQSYCAKHLKCSQKCDQNKFSVKCSCYEGWVLEPDGESCRSLDPF 1267
Query: 460 QDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1268 K---PFIIFSNRHEIRRIDLH 1285
Score = 131 bits (330), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 104/202 (51%), Gaps = 10/202 (4%)
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
D C Q C CI W CD E DC D +DE + A C PNE
Sbjct: 22 DAPKTCSPKQFACRDQITCISKGWRCDGERDCP-----DGSDEAPEICPQSKAQRCQPNE 76
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNN-KADCENLKCSHKCSPTPRGAMCFCP 403
C + CV +S+ C+G DC +G DEGP C + +C L C H C PT G C+C
Sbjct: 77 HNCLGTELCVPMSRLCNGVQDCMDGSDEGPHCRELQGNCSRLGCQHHCVPTLDGPTCYCN 136
Query: 404 AG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460
+ Q KT C D DEC + G+C Q CTNT S++C C EGY L+PD +SC A N P
Sbjct: 137 SSFQLQADGKT-CKDFDECSVYGTCSQLCTNTDGSFICGCVEGYLLQPDNRSCKAKNEPV 195
Query: 461 DEPASIIFSSTVDIRRIHLNGS 482
D P ++ +++ +I +L+G+
Sbjct: 196 DRPPVLLIANSQNILATYLSGA 217
Score = 129 bits (324), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/344 (32%), Positives = 162/344 (47%), Gaps = 40/344 (11%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE-CTPGQFSC-GM 214
D +H C + C +++C++ CDG DC +G DE C + C P FSC G
Sbjct: 2726 DETHCNKFCSEAQFEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKTCGPSSFSCPGT 2784
Query: 215 GKCIPESWKCDGFVDCLEDGSDE--PNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMD 270
C+PE W CDG DC DG+DE C++ C + + C +++CIP +++CD + D
Sbjct: 2785 HVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTCDDREFMCQ-NRQCIPKHFVCDHDRD 2842
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
C+ D +DE + ++ C + +CA + W CD E DC D +DE
Sbjct: 2843 CA-----DGSDESPECEYPTCGPSEFRCANGRCLSSRQWECDGENDCH-----DQSDE-- 2890
Query: 330 DKYFSHNAVLCHPNELRCGSSNQ-------CVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+ C E +C +S+Q CVA + C+G+ DC + DE N+
Sbjct: 2891 ----APKNPHCTSQEHKCNASSQFLCSSGRCVAEALLCNGQDDCGDSSDERGCHINECLS 2946
Query: 383 ENLK-CSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCS 439
L CS C G C C G + C D DEC C Q C NTH SY C
Sbjct: 2947 RKLSGCSQDCEDLKIGFKCRCRPGFRLKDDGRTCADVDECSTTFPCSQRCINTHGSYKCL 3006
Query: 440 CTEGYTLR-PDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C EGY R D SC AV DE +IF++ +R+++L+GS
Sbjct: 3007 CVEGYAPRGGDPHSCKAVT---DEEPFLIFANRYYLRKLNLDGS 3047
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 151/369 (40%), Gaps = 87/369 (23%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3536 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3594
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE + C +C Q QC S CIP W CD + DC +D +DE+
Sbjct: 3595 DGDHDC-ADGSDEKD-CTPRCDMDQFQCK-SGHCIPLRWRCDADADC-----MDGSDEE- 3645
Query: 285 DKFHQCFNGQVQCALSK------KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
C G C L + C P W CD E DC DN+DE+ ++
Sbjct: 3646 ----ACGTGVRTCPLDEFQCNNTLCKPLAWKCDGEDDCG-----DNSDENPEECAR---F 3693
Query: 339 LCHPNE-LRCGSSNQCVALSKFCDGKPDCSNGEDE---------GPFCNNKAD--CENLK 386
+C PN RC + C+ + + CDG +C +G DE C +K + C N +
Sbjct: 3694 VCPPNRPFRCKNDRVCLWIGRQCDGTDNCGDGTDEEDCEPPTAHTTHCKDKKEFLCRNQR 3753
Query: 387 C----------------------------------------SHKCSPTPRGAMCFCPAGQ 406
C +C T + A C C +G
Sbjct: 3754 CLSSSLRCNMFDDCGDGSDEEDCSIDPKLTSCATNASICGDEARCVRTEKAAYCACRSGF 3813
Query: 407 N--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY-----TLRPDGKSCTAVNVP 459
+ P + C D +ECL G+C Q C NT ++CSC + T + +G + +
Sbjct: 3814 HTVPGQPGCQDINECLRFGTCSQLCNNTKGGHLCSCARNFMKTHNTCKAEGSEYQVLYIA 3873
Query: 460 QDEPASIIF 468
D +F
Sbjct: 3874 DDNEIRSLF 3882
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 102/199 (51%), Gaps = 16/199 (8%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
+++C+ CD + DC + DE P C +C PGQF C G C ++ CDG DC +D
Sbjct: 3343 NDKCIPFWWKCDTEDDCGDHSDEPPDCPEFKCRPGQFQCSTGICTNPAFICDGDNDC-QD 3401
Query: 234 GSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
SDE N IH C Q +C + +CIP + C+ + +C D DE C
Sbjct: 3402 NSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDERDCPEVTCAPN 3456
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q QC+++K+CIP W+CD + DC VD +DE + + C +E RC S +C
Sbjct: 3457 QFQCSITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVDEFRCKDSGRC 3507
Query: 354 VALSKFCDGKPDCSNGEDE 372
+ CDG+ DC +G DE
Sbjct: 3508 IPARWKCDGEDDCGDGSDE 3526
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 98/216 (45%), Gaps = 25/216 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
S+ +CV+ +C+G DC +G DE P C G+F C G CI S +C+ FVDC ED
Sbjct: 2574 SNGRCVSNMLWCNGADDCGDGSDEIPCNKTACGVGEFRCRDGTCIGNSSRCNQFVDC-ED 2632
Query: 234 GSDEPNTCIHQC---FNGQVQ------CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
SDE N C F V+ C + C +W+CD DC D D D
Sbjct: 2633 ASDEMNCSATDCSSYFRLGVKGVLFQPCERTSLCYAPSWVCDGANDCG--DYSDERDCPG 2690
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
K +C C S +CIP +W CD+E DC + DE +H C +
Sbjct: 2691 VKRPRCPLNYFACP-SGRCIPMSWTCDKEDDCEHGE-----DE------THCNKFCSEAQ 2738
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
C +++C++ CDG DC +G DE C K
Sbjct: 2739 FEC-QNHRCISKQWLCDGSDDCGDGSDEAAHCEGKT 2773
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 93 SWDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN 149
S D+PA ++ +D +R+E ++G +R +V + + + + ++ + L+W +
Sbjct: 705 SLDIPAGRLYWVDAFYDRIETILLNGTDRK-IVYEGPELNHAFGLCHHGNYLFWTEYRSG 763
Query: 150 TVESVR--VDGSHNAVLCHPNE------LRCGSSNQ--------------CVALSKFCDG 187
+V + V G+ V +E +R + Q C +L G
Sbjct: 764 SVYRLERGVGGAPPTVTLLRSERPPIFEIRMYDAQQQQVGTNKCRVNNGGCSSLCLATPG 823
Query: 188 KPDCSNGEDE-----GPFCNA--------ECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ED+ G C A +C PG+F+C +CI E WKCDG DCL++
Sbjct: 824 SRQCACAEDQVLDADGVTCLANPSYVPPPQCQPGEFACANSRCIQERWKCDGDNDCLDNS 883
Query: 235 SDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG 293
+ P C H C + + +C + +CIP+ WLCD + DC + N C
Sbjct: 884 DEAPALCHQHTCPSDRFKCE-NNRCIPNRWLCDGDNDCGNSEDESNATC---SARTCPPN 939
Query: 294 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQC 353
Q CA S +CIP +W CD + DC D +DE + C P ++ +C
Sbjct: 940 QFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASCAYP----TCFPLTQFTCNNGRC 989
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT 394
+ ++ CD DC + DE CSH CS T
Sbjct: 990 ININWRCDNDNDCGDNSDEA------------GCSHSCSST 1018
Score = 80.5 bits (197), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 131/317 (41%), Gaps = 70/317 (22%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS------ 159
RLE+A M G +R VT K + WP+ L +D LYW D+ + +E++ ++G+
Sbjct: 678 RLERAWMDGSHRDIFVTSKTVLWPNGLSLDIPAGRLYWVDAFYDRIETILLNGTDRKIVY 737
Query: 160 ------HNAVLCHPN------ELRCGSSNQCVALSKFCDGKPDCS---NGEDEGPFCNAE 204
H LCH E R GS + L + G P E F
Sbjct: 738 EGPELNHAFGLCHHGNYLFWTEYRSGSVYR---LERGVGGAPPTVTLLRSERPPIFEIRM 794
Query: 205 CTPGQFSCGMGKC-------------IPESWKC----------DGFVDCLEDGSDEPNTC 241
Q G KC P S +C DG V CL + S P
Sbjct: 795 YDAQQQQVGTNKCRVNNGGCSSLCLATPGSRQCACAEDQVLDADG-VTCLANPSYVPPP- 852
Query: 242 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCAL 299
QC G+ CA S +CI W CD + DC +DN+DE HQ C + + +C
Sbjct: 853 --QCQPGEFACANS-RCIQERWKCDGDNDC-----LDNSDEAPALCHQHTCPSDRFKCE- 903
Query: 300 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKF 359
+ +CIP+ WLCD + DC + N + +A C PN+ C +S +C+ +S
Sbjct: 904 NNRCIPNRWLCDGDNDCGNSEDESNA--------TCSARTCPPNQFSC-ASGRCIPISWT 954
Query: 360 CDGKPDCSNGEDEGPFC 376
CD DC + DE C
Sbjct: 955 CDLDDDCGDRSDESASC 971
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4025 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPIV 4081
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ + GM G +RS +V I WP+ L +DY + +YW D+ + +E +DGS+ V+
Sbjct: 3170 IGRIGMDGSSRSVIVDTKITWPNGLTLDYVTERIYWADAREDYIEFASLDGSNRHVV 3226
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2032 RIERSRLDGTERVVLVNVSISWPNGISVDYQDGKLYWCDARTDKIERIDLETGEN 2086
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A + G N L+ K+I+ P+ L ID+ + LY+ D+ L+ +E DGSH V+
Sbjct: 2358 IMRAALSGANVLTLIEKDIRTPNGLAIDHRAEKLYFSDATLDKIERCEYDGSHRYVI 2414
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 41/83 (49%), Gaps = 7/83 (8%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FC----NAECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C C P + +C G C+
Sbjct: 27 CSPKQFACRDQITCISKGWRCDGERDCPDGSDEAPEICPQSKAQRCQPNEHNCLGTELCV 86
Query: 219 PESWKCDGFVDCLEDGSDEPNTC 241
P S C+G DC+ DGSDE C
Sbjct: 87 PMSRLCNGVQDCM-DGSDEGPHC 108
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDE 267
+F C G+CI S CDG C + ++P+ C +C QC+ + +C+ + C+
Sbjct: 2529 EFECANGECINFSLTCDGVPHCKDKSDEKPSYCNSRRCKKTFRQCS-NGRCVSNMLWCNG 2587
Query: 268 EMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCS-TDDIVDNTD 326
DC D +DE C G+ +C CI ++ C++ +DC D ++ +
Sbjct: 2588 ADDCG-----DGSDEIPCNKTACGVGEFRCR-DGTCIGNSSRCNQFVDCEDASDEMNCSA 2641
Query: 327 EDWDKYF--SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D YF VL P C ++ C A S CDG DC + DE
Sbjct: 2642 TDCSSYFRLGVKGVLFQP----CERTSLCYAPSWVCDGANDCGDYSDE 2685
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G +
Sbjct: 347 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKGRQTI 404
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 48 FKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN----DLLNSWDLPAPEIFP 103
K+ LN + +AL+F++R Q + + S+ +R +N +L+ L P+
Sbjct: 3052 LKQGLN--NAVALDFDYREQMIYWTDVTTQGSM-IRRMHLNGSNVQVLHRTGLSNPDGLA 3108
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D + +E + ++G R+ LV+ ++ P +LV+D LYW D +
Sbjct: 3109 VDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVSSGLREPRALVVDVQNGYLYWTDWGDHS 3168
Query: 150 TVESVRVDGSHNAVL 164
+ + +DGS +V+
Sbjct: 3169 LIGRIGMDGSSRSVI 3183
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1406 WDASLP-------RIEAASMSGAGRRTVHRETGSGGWPNGLTVDYLEKRILWIDARSDAI 1458
Query: 152 ESVRVDGSHNAVLCHPNEL 170
S R DGS + + +E
Sbjct: 1459 YSARYDGSGHMEVLRGHEF 1477
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
A C PNE C + CV +S+ C+G DC +G DEGP C
Sbjct: 69 AQRCQPNEHNCLGTELCVPMSRLCNGVQDCMDGSDEGPHC 108
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLP-APEIFPLDERL 108
L H LA+++ RN ++ ++ RL + N ++ + P + PL +L
Sbjct: 1657 LPNAHGLAVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVVQGLEQPHGLVVHPLRGKL 1716
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G NR+ L + + P L ID+ + LYW S +T+ +DGS
Sbjct: 1717 YWTDGDNISMANMDGSNRTLLFSGQ-KGPVGLAIDFPESKLYWISSGNHTINRCNLDGSG 1775
Query: 161 NAVL 164
V+
Sbjct: 1776 LEVI 1779
Score = 37.0 bits (84), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QC+++K+CIP W+CD + DC VD +DE
Sbjct: 3453 CAPNQFQCSITKRCIPRVWVCDRDNDC-----VDGSDE 3485
Score = 36.6 bits (83), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 81/202 (40%), Gaps = 33/202 (16%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + Q +C S +CIP +W CD + DC D D T + R G HT EF
Sbjct: 1013 HSCSSTQFKCN-SGRCIPEHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHT--DEF 1067
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPE-IFPLDERLEKAGMHGENRSPL 121
R LC +R RC D ++S D + E + + + K G R
Sbjct: 1068 QCRLDGLCI-------PLRWRCDGDTDCMDSSDEKSCEGVTHVCDPSVKFGCKDSAR--C 1118
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCG-SSNQCVA 180
++K + CD N E + + ++ C P C +++ C+
Sbjct: 1119 ISK----------------AWVCDGD-NDCEDNSDEENCESLACRPPSHPCANNTSVCLP 1161
Query: 181 LSKFCDGKPDCSNGEDEGPFCN 202
K CDG DC +G DEG C+
Sbjct: 1162 PDKLCDGNDDCGDGSDEGELCD 1183
>sp|P98163|YL_DROME Putative vitellogenin receptor OS=Drosophila melanogaster GN=yl PE=1
SV=2
Length = 1984
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 169/367 (46%), Gaps = 62/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNA--ECTPGQFSCGMGKCIPESW 222
CH ++ C + +CV S CDG DC + DE C A C PG F CG G CI SW
Sbjct: 1118 CHVHQHGC-DNGKCVDSSLVCDGTNDCGDNSDE-LLCEATSRCEPGMFQCGSGSCIAGSW 1175
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD---------EEMDCST 273
+CDG +DC DGSDE + C+H+ +Q L +C+ + +CD +E++C T
Sbjct: 1176 ECDGRIDC-SDGSDEHDKCVHRSCPPDMQRCLLGQCLDRSLVCDGHNDCGDKSDELNCGT 1234
Query: 274 DDIVDNTDEDWDKFH-------------------QCFNGQ-------------VQCALSK 301
D N D++ +C G+ +C +
Sbjct: 1235 DSSTMNISCAEDQYQCTSNLKICLPSTVRCNGTTECPRGEDEADCGDVCSIYEFKCRSGR 1294
Query: 302 KCIPHNWLCDEEMDCS--TDDIV-----DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+CI + CD + DC +D++ + ++ + +S ++ C P+ C +CV
Sbjct: 1295 ECIRREFRCDGQKDCGDGSDELSCELEKGHHNQSQIQPWSTSSRSCRPHLFDC-QDGECV 1353
Query: 355 ALSKFCDGKPDCSNGEDEGPFCNN--KADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQ 412
LS+ C+ PDC+NG DEGP C ++ C HKC TP GA+C C G + Q
Sbjct: 1354 DLSRVCNNFPDCTNGHDEGPKCATACRSASGRQVCQHKCRATPAGAVCSCFDGYRLDADQ 1413
Query: 413 --CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSS 470
C+D DEC C Q C NT Y C C + LR D SC ++ A+++FSS
Sbjct: 1414 KSCLDIDECQEQQPCAQLCENTLGGYQCQCHADFMLRQDRVSCKSLQ----SGATLLFSS 1469
Query: 471 TVDIRRI 477
++R +
Sbjct: 1470 FNEVRNL 1476
Score = 112 bits (281), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 148/333 (44%), Gaps = 49/333 (14%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQ-FSCGM--GKCIPESWKCDGFVDCLEDG 234
C+ +K CDG+ DC + DE C P F C G C+ C+G +C G
Sbjct: 102 CILQAKMCDGRGDCKDSSDELDCDYRLCRPPHWFPCAQPHGACLAAELMCNGIDNC-PGG 160
Query: 235 SDEPNTCIH-------------QCFNGQVQCALSKKCIPHNWLCDEEMDCS--TDDIVDN 279
DE N + C + C + CIP +++CD DC+ +D++
Sbjct: 161 EDELNCPVRPGFRFGDTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGC 220
Query: 280 TDEDW---DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
+ + H C NG+ C K+ W+CD DD D +DE
Sbjct: 221 KQAEITCPGEGHLCANGR--CLRRKQ-----WVCD-----GVDDCGDGSDERG------C 262
Query: 337 AVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCS--HKCS 392
LC P + C + C+ LS+ CDG DCS+G DE C++K DC+ KC+ KC
Sbjct: 263 LNLCEPQKGKFLCRNRETCLTLSEVCDGHSDCSDGSDETDLCHSKPDCDAKKCALGAKCH 322
Query: 393 PTP-RGAMCFCPAGQNPNKTQ--CVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
P GA CFCP G K + C D DEC D C Q C NT Y C C GY L
Sbjct: 323 MMPASGAECFCPKGFRLAKFEDKCEDVDECKEQDDLCSQGCENTSGGYRCVCDAGYLLDK 382
Query: 449 DGKSCTAVNV-PQDEPASIIFSSTVDIRRIHLN 480
D ++C AV +++ +++++ + I +HL
Sbjct: 383 DNRTCRAVVYGSKEQQPLLLYTTQMTIMGMHLR 415
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 86/184 (46%), Gaps = 30/184 (16%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ--------CFNGQVQCALSKKCIP 260
+F C G+C+ + +C+G DC+ D SDE N C + C Q C ++C+
Sbjct: 1032 EFRCHSGECLTMNHRCNGRRDCV-DNSDEMN-CDEEHRRKPKVLCSPNQFACHSGEQCVD 1089
Query: 261 HNWLCDEEMDCSTDDIVDNTDED----WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
CD DC D++DE +DK +C Q C + KC+ + +CD DC
Sbjct: 1090 KERRCDNRKDCH-----DHSDEQHCEKFDKSKKCHVHQHGCD-NGKCVDSSLVCDGTNDC 1143
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
DN+DE C P +CGS + C+A S CDG+ DCS+G DE C
Sbjct: 1144 G-----DNSDE----LLCEATSRCEPGMFQCGSGS-CIAGSWECDGRIDCSDGSDEHDKC 1193
Query: 377 NNKA 380
+++
Sbjct: 1194 VHRS 1197
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 65/131 (49%), Gaps = 10/131 (7%)
Query: 157 DGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECT-PGQ-FSCG 213
D +H C E C C+ + CDG+PDC++ DE C AE T PG+ C
Sbjct: 176 DTAHRMRSCSKYEFMCQQDRTCIPIDFMCDGRPDCTDKSDEVAGCKQAEITCPGEGHLCA 235
Query: 214 MGKCI-PESWKCDGFVDCLEDGSDEPNTCIHQC--FNGQVQCALSKKCIPHNWLCDEEMD 270
G+C+ + W CDG DC DGSDE C++ C G+ C + C+ + +CD D
Sbjct: 236 NGRCLRRKQWVCDGVDDC-GDGSDE-RGCLNLCEPQKGKFLCRNRETCLTLSEVCDGHSD 293
Query: 271 CSTDDIVDNTD 281
CS D D TD
Sbjct: 294 CS--DGSDETD 302
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----NA 162
+ +A M G P+V+ NI+WP+ + +D +Q +YW D+ L +V++VR DG+ +
Sbjct: 542 IGRASMDGSRSRPIVSDNIEWPNGIALDMHQQRIYWVDAKLGSVQTVRPDGTGRRTVLDG 601
Query: 163 VLCHPNEL 170
+L HP L
Sbjct: 602 MLKHPYGL 609
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 27/47 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
+ A + G R L+ ++ + ++L D +Q +LY+ D H+ T+E +
Sbjct: 1607 IHMARLDGSRRDMLLQRSESFMTALTTDPHQQLLYFVDQHMRTLERI 1653
>sp|P98157|LRP1_CHICK Low-density lipoprotein receptor-related protein 1 OS=Gallus gallus
GN=LRP1 PE=2 SV=1
Length = 4543
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 155/322 (48%), Gaps = 36/322 (11%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLED 233
++ +C+ ++ CD DC + DE C+ C+ QF C G+CIP W CDG DC +
Sbjct: 983 NNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGRCIPVHWTCDGDNDCGDY 1041
Query: 234 GSDEPNTCIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED--W 284
+ C +Q C + QC L CIP W CD + DC +D++DE
Sbjct: 1042 SDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTDC-----MDSSDEKNCE 1096
Query: 285 DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
H C N + C S +CI W+CD + DC DN+DE+ + +++C P
Sbjct: 1097 GVTHVCDPNVKFGCKDSARCISKAWVCDGDSDCE-----DNSDEE-----NCESLVCKPP 1146
Query: 344 ELRCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTP-RGAMCF 401
C ++ C+ K CDG DC +G DEG C+ + N CSH C+ P G +C
Sbjct: 1147 SHTCANNTSICLPPEKLCDGSDDCGDGSDEGELCD-QCSLNNGGCSHNCTVAPGEGIVCS 1205
Query: 402 CPAGQN---PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458
CP G NKT C C C Q C + CSC EG+ L PDG+SC +++
Sbjct: 1206 CPLGMELGADNKT-CQIQSYCAKHLKCSQKCEQDKYNVKCSCYEGWMLEPDGESCRSLDP 1264
Query: 459 PQDEPASIIFSSTVDIRRIHLN 480
+ IIFS+ +IRRI L+
Sbjct: 1265 FK---PFIIFSNRHEIRRIDLH 1283
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q C CI W CD E DC D +DE D C PNE C
Sbjct: 29 CSPKQFACKDQITCISKGWRCDGEKDCP-----DGSDESPDICPQSKVSRCQPNEHNCLG 83
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPRGAMCFC--PAGQ 406
+ C+ +SK C+G DC +G DEGP C + A+C L C H C PT G C+C
Sbjct: 84 TELCIHMSKLCNGLHDCFDGSDEGPHCREQLANCTALGCQHHCVPTLSGPACYCNNSFQL 143
Query: 407 NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASI 466
++ C D DEC + G+C QTCTNT SY CSC EGY L+PD +SC A N P D P +
Sbjct: 144 AEDRRSCKDFDECTVYGTCSQTCTNTEGSYTCSCVEGYLLQPDNRSCKAKNEPVDRPPVL 203
Query: 467 IFSSTVDIRRIHLNGS 482
+ +++ +I +L+G+
Sbjct: 204 LIANSQNILATYLSGA 219
Score = 122 bits (307), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 164/367 (44%), Gaps = 61/367 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE---CTPGQFSCGMGKCIPES 221
C N C S +C+ ++ CD + DC NGEDE + C P QF C +CI +
Sbjct: 2690 CPANYFAC-PSGRCIPMTWTCDKEDDCENGEDETHCSERQDKFCYPVQFECNNHRCISKL 2748
Query: 222 WKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W CDG DC DGSDE + C + C G QC + C+P WLCD + DC+ D
Sbjct: 2749 WVCDGADDC-GDGSDEDSRCRLTTCSTGSFQCPGTYVCVPERWLCDGDKDCA-----DGA 2802
Query: 281 DEDWDKF----HQCFNGQVQCALSKKCIPHNWLCD----------------------EEM 314
DE + C + C +++CIP +++CD E
Sbjct: 2803 DETLAAGCLYNNTCDEREFMCG-NRQCIPKHFVCDHDDDCGDGSDESPECEYPTCGPHEF 2861
Query: 315 DCSTDDIVDNTDEDWDKYFS-HNAVLCHPNELRCGS-------------SNQCVALSKFC 360
C+ + N+ + D F H+ P RC S + +C+ + C
Sbjct: 2862 RCANGRCLSNSQWECDGEFDCHDHSDEAPKNPRCSSPESKCNDSFFMCKNGKCIPEALLC 2921
Query: 361 DGKPDCSNGEDE-GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDA 416
D DC++G DE F N + + CS +C G C C G ++ KT C+D
Sbjct: 2922 DNNNDCADGSDELNCFINECLNKKLSGCSQECEDLKIGYKCRCRPGFRLKDDGKT-CIDI 2980
Query: 417 DECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIR 475
DEC C Q C NT SY C C EGY L+PD SC AV DE +IF++ +R
Sbjct: 2981 DECSTTYPCSQKCINTLGSYKCLCIEGYKLKPDNPTSCKAVT---DEEPFLIFANRYYLR 3037
Query: 476 RIHLNGS 482
+++L+GS
Sbjct: 3038 KLNLDGS 3044
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 142/337 (42%), Gaps = 75/337 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P + RC +N+CV CD DC + DE C+ +FSC G+CI WKC
Sbjct: 3533 CEPYQFRC-KNNRCVPGRWQCDYDNDCGDNSDEESCTPRPCSESEFSCANGRCIAGRWKC 3591
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED- 283
DG DC DGSDE + CI +C Q QC + CIP W CD + DC +D TDE+
Sbjct: 3592 DGDHDC-ADGSDEKD-CIPRCEFDQYQCK-NGHCIPMRWRCDADADC-----MDGTDEED 3643
Query: 284 -WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C + QC + + P W CD E DC DN+DE+ ++ C P
Sbjct: 3644 CGTGVRTCPLDEFQCNNTLR-KPLAWKCDGEDDCG-----DNSDENPEECLKFQ---CPP 3694
Query: 343 NE-LRCGSSNQCVALSKFCDGKPDCSNGED----EGPFC--------NNKADCENLK--- 386
N RC + C+ + + CDG +C + D E P N+ CEN K
Sbjct: 3695 NRPFRCKNDRVCLWIGRQCDGIDNCGDNTDEKDCESPTAKPKSCSQDKNEFLCENKKCIS 3754
Query: 387 -------------------CSH------------------KCSPTPRGAMCFCPAG--QN 407
CSH +C C C G +
Sbjct: 3755 ANLRCNFFDDCGDGSDEKSCSHEHKSYDCMTNTTMCGDEAQCIQAQSSTYCTCRRGFQKV 3814
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
P+K C D +ECL G+C Q C NT S+VCSC + +
Sbjct: 3815 PDKNSCQDVNECLRFGTCSQLCNNTKGSHVCSCAKNF 3851
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 110/211 (52%), Gaps = 18/211 (8%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C P++ +C ++N+C+ C+G+ +C +GEDE C P QF C + K CIP W
Sbjct: 3409 VCLPSQFKCTNTNRCIPGIFRCNGQDNCGDGEDEKDCPEVTCAPNQFQCAITKRCIPRVW 3468
Query: 223 KCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
CD DC+ DGSDEP C C + +C S +CIP W CD E DC D D
Sbjct: 3469 VCDRDNDCV-DGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCG--DGSDEPK 3525
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
E+ D+ C Q +C + +C+P W CD + DC DN+DE+ S C
Sbjct: 3526 EECDE-RTCEPYQFRCK-NNRCVPGRWQCDYDNDCG-----DNSDEE-----SCTPRPCS 3573
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+E C ++ +C+A CDG DC++G DE
Sbjct: 3574 ESEFSC-ANGRCIAGRWKCDGDHDCADGSDE 3603
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/364 (27%), Positives = 153/364 (42%), Gaps = 91/364 (25%)
Query: 107 RLEKAGMHGENRSPLVT-KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-- 163
++E+A M G NR+ +T K + WP+ L +D ILYW D+ + +E V ++G+ +
Sbjct: 680 KIERAWMDGSNRNVFITSKTVLWPNGLSLDIPAKILYWVDAFYDRIEMVYLNGTERKIVY 739
Query: 164 ----------LCHPN------ELRCGS------SNQCVAL-------------------- 181
LCH + E R GS S++ V+L
Sbjct: 740 EGPELNHAFGLCHYSSFLFWTEYRSGSIYRLDQSSKAVSLLRNERPPIFEIRMYDAQQQQ 799
Query: 182 -------------SKFCDGKP---DCSNGEDE-----GPFCNA--------ECTPGQFSC 212
S C P C+ ED+ C A +C PG+F+C
Sbjct: 800 VGSNKCRVNNGGCSSLCLATPRGRQCACAEDQILGADSVTCEANPSYIPPPQCQPGEFAC 859
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
+CI E WKCDG DCL++ + P C H C + + +C + +CIP+ WLCD + DC
Sbjct: 860 KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCK-NNRCIPNRWLCDGDNDC 918
Query: 272 STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 331
++ N+ C Q CA S +CIP +W CD + DC D +DE
Sbjct: 919 GNNEDESNSTC---SARTCSPNQFSCA-SGRCIPISWTCDLDDDCG-----DRSDESASC 969
Query: 332 YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC-SHK 390
+ C P ++ +C+ ++ CD DC + DE C++ KC S +
Sbjct: 970 AYP----TCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEAG-CSHSCSSNQFKCNSGR 1024
Query: 391 CSPT 394
C P
Sbjct: 1025 CIPV 1028
Score = 92.8 bits (229), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 157/449 (34%), Gaps = 151/449 (33%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDER---- 107
L+ LA+++ N C + + +L A L+NS L P +D +
Sbjct: 3098 LSNPDGLAVDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNS-GLREPRALVVDVQNGYL 3156
Query: 108 ----------LEKAGMHGENRSPLVTKNIQWPSSLVIDY--------------------- 136
+ K GM G NRS +V I WP+ L +DY
Sbjct: 3157 YWTDWGDHSLIGKIGMDGTNRSVIVDTKITWPNGLTLDYINSRIYWADAREDYIEFASLD 3216
Query: 137 --------NQDI------------LYWCDSHLNTVESV-RVDGSHNAVL----------- 164
+QDI +YW D ++ + G++ +L
Sbjct: 3217 GSNRHTVLSQDIPHIFALTLFEDYIYWTDWETKSINRAHKTTGANKTLLISTLHRPMDIH 3276
Query: 165 --------------CHPNELRC--------GSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202
C N C G ++C + F G +G C
Sbjct: 3277 IYHPYRQPDVPNHPCKTNNAGCSNLCLLSPGGGHKCACPTNFYLGS--------DGKTCV 3328
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDC-------------------------------- 230
+ CT QF C KCIP WKCD DC
Sbjct: 3329 SNCTASQFVCKNDKCIPFWWKCDTEDDCGDRSDEPEDCPEFKCRPGQFQCSTGICTNPAF 3388
Query: 231 -------LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
+D SDE N IH C Q +C + +CIP + C+ + +C D DE
Sbjct: 3389 ICDGDNDCQDNSDEANCDIHVCLPSQFKCTNTNRCIPGIFRCNGQDNCG-----DGEDEK 3443
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C Q QCA++K+CIP W+CD + DC VD +DE + + C +
Sbjct: 3444 DCPEVTCAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDEP----ANCTQMTCGVD 3494
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E RC S +C+ CDG+ DC +G DE
Sbjct: 3495 EFRCKDSGRCIPARWKCDGEDDCGDGSDE 3523
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 110/268 (41%), Gaps = 54/268 (20%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG-QFSCGMGKCIPESW 222
C P E C +N+C+ CDG DC + DE P C+ P +F C +CIP W
Sbjct: 852 CQPGEFAC-KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPSDRFKCKNNRCIPNRW 910
Query: 223 KCDGFVDCLEDGSDEPNTC-IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS--------- 272
CDG DC + + +TC C Q CA S +CIP +W CD + DC
Sbjct: 911 LCDGDNDCGNNEDESNSTCSARTCSPNQFSCA-SGRCIPISWTCDLDDDCGDRSDESASC 969
Query: 273 ---------------------------TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+D DN+DE H C + Q +C S +CIP
Sbjct: 970 AYPTCFPLTQFTCNNGRCININWRCDNDNDCGDNSDEA-GCSHSCSSNQFKCN-SGRCIP 1027
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPD 365
+W CD + DC D D T + + CH +E +C C+ + CDG D
Sbjct: 1028 VHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHTDEFQCRLDGLCIPMRWRCDGDTD 1085
Query: 366 CSNGEDEGPFCNNKADCENLKCSHKCSP 393
C + DE +CE + +H C P
Sbjct: 1086 CMDSSDE-------KNCEGV--THVCDP 1104
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 101/259 (38%), Gaps = 63/259 (24%)
Query: 168 NELRCGSSNQCVALSKFCDGKP-------------------------------------- 189
+E CG+ + C+ S+ CDG
Sbjct: 2522 DEFECGNGD-CIDFSRTCDGVVHCKDKSDEKQSYCSSRKCKKGFLHCMNGRCVASRFWCN 2580
Query: 190 ---DCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC- 245
DC + DE P C +F C G CI S +C+ F+DC ED SDE N C
Sbjct: 2581 GVDDCGDNSDEVPCNKTSCAATEFRCRDGSCIGNSSRCNQFIDC-EDASDEMNCTATDCS 2639
Query: 246 --FNGQV------QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
F V +C + C +W+CD DC D D + + +C C
Sbjct: 2640 SYFKLGVKGTTFQKCEHTSLCYAPSWVCDGANDCG--DYSDERNCPGGRKPKCPANYFAC 2697
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
S +CIP W CD+E DC + + E DK+ C+P + C ++++C++
Sbjct: 2698 P-SGRCIPMTWTCDKEDDCENGEDETHCSERQDKF-------CYPVQFEC-NNHRCISKL 2748
Query: 358 KFCDGKPDCSNGEDEGPFC 376
CDG DC +G DE C
Sbjct: 2749 WVCDGADDCGDGSDEDSRC 2767
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++E A M G R LV NIQWP+ L +DY+ + LYW D+ L+ + S+R++G+ V
Sbjct: 4024 KIETAAMDGTLRETLVQDNIQWPTGLAVDYHNERLYWADAKLSVIGSIRLNGTDPVV 4080
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
R+E++ + G R LV +I WP+ + +DY LYWCD+ + +E + ++ N
Sbjct: 2028 RIERSRLDGTERMVLVNVSISWPNGISVDYEDGKLYWCDARTDKIERIDLETGEN 2082
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+ M G+NR+ LV I +P + +D ++YW D++L+ +E V +G + +
Sbjct: 349 KVERCDMDGQNRTKLVDSKIVFPHGITLDLVSRLVYWADAYLDYIEVVDYEGKNRHTI 406
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCN----AECTPGQFSC-GMGKCI 218
C P + C C++ CDG+ DC +G DE P C + C P + +C G CI
Sbjct: 29 CSPKQFACKDQITCISKGWRCDGEKDCPDGSDESPDICPQSKVSRCQPNEHNCLGTELCI 88
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFN 247
S C+G DC DGSDE C Q N
Sbjct: 89 HMSKLCNGLHDCF-DGSDEGPHCREQLAN 116
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 15/108 (13%)
Query: 72 IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE---------------RLEKAGMHGE 116
I + V RL + ++ P F LDE + +A + G
Sbjct: 2301 ITRHTVDQSRLGAFERETVITMSGDDHPRAFVLDECQNLMFWTNWNEQHPSIMRATLSGA 2360
Query: 117 NRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
N ++ ++I+ P+ L ID+ + +Y+ D+ L+ +E DGSH V+
Sbjct: 2361 NVLIIIDQDIRTPNGLAIDHRAEKIYFSDATLDKIERCEYDGSHRHVI 2408
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Query: 48 FKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQIN----DLLNSWDLPAPEIFP 103
K+ LN + +AL+F++R Q + + S+ +R IN +L+ L P+
Sbjct: 3049 LKQGLN--NAVALDFDYREQMIYWTDVTTQGSM-IRRMHINGSNVQVLHRTGLSNPDGLA 3105
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D + +E + ++G R+ LV ++ P +LV+D LYW D +
Sbjct: 3106 VDWVGGNLYWCDKGRDTIEVSKLNGAYRTVLVNSGLREPRALVVDVQNGYLYWTDWGDHS 3165
Query: 150 TVESVRVDGSHNAVL 164
+ + +DG++ +V+
Sbjct: 3166 LIGKIGMDGTNRSVI 3180
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 52 LNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDLPA-PEIFPLDERL 108
L H L++++ RN ++ ++ RL + N ++ D P + PL +L
Sbjct: 1655 LPNAHGLSVDWVSRNLFWTSYDTNKKQINVARLDGSFKNAVIQGLDKPHCLVVHPLHGKL 1714
Query: 109 --------EKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH 160
A M G NR+ L T N + P L IDY + LYW S T+ +DGS
Sbjct: 1715 YWTDGDNISVANMDGSNRTLLFT-NQRGPVGLAIDYPESKLYWISSGNGTINRCNLDGSD 1773
Query: 161 NAVL 164
V+
Sbjct: 1774 LEVI 1777
Score = 38.9 bits (89), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPL--VTKNIQWPSSLVIDYNQDILYWCDSHLNTV 151
WD P R+E A M G R + T + WP+ L +DY + + W D+ + +
Sbjct: 1404 WDASLP-------RIEAASMSGAGRRTIHKETGSGGWPNGLTVDYLEKRILWIDARSDAI 1456
Query: 152 ESVRVDGS-HNAVL 164
S DG+ H VL
Sbjct: 1457 YSALYDGTGHIEVL 1470
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 5/38 (13%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 42
C Q QCA++K+CIP W+CD + DC VD +DE
Sbjct: 3450 CAPNQFQCAITKRCIPRVWVCDRDNDC-----VDGSDE 3482
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 78/213 (36%), Gaps = 55/213 (25%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEF 62
H C + Q +C S +CIP +W CD + DC D D T + R G HT EF
Sbjct: 1011 HSCSSNQFKCN-SGRCIPVHWTCDGDNDCG--DYSDETHANCTNQATRPPGGCHT--DEF 1065
Query: 63 NHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLV 122
R LC +R RC D ++S D
Sbjct: 1066 QCRLDGLCI-------PMRWRCDGDTDCMDSSD--------------------------- 1091
Query: 123 TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRV-DGSHN-----------AVLCHPNEL 170
KN + + + + ++ + C + V DG + +++C P
Sbjct: 1092 EKNCEGVTHVC---DPNVKFGCKDSARCISKAWVCDGDSDCEDNSDEENCESLVCKPPSH 1148
Query: 171 RCGSSNQ-CVALSKFCDGKPDCSNGEDEGPFCN 202
C ++ C+ K CDG DC +G DEG C+
Sbjct: 1149 TCANNTSICLPPEKLCDGSDDCGDGSDEGELCD 1181
>sp|P35953|VLDLR_RABIT Very low-density lipoprotein receptor OS=Oryctolagus cuniculus
GN=VLDLR PE=2 SV=1
Length = 873
Score = 138 bits (348), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC +GEDE N C+ +F+C G+CI ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCGNVTCSSDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C + G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 156/376 (41%), Gaps = 93/376 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C ++ +C+ CDG DC +G DE C F C G+CIP W+C
Sbjct: 33 CEASQFQC-TNGRCITQLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQCIPNRWQC 91
Query: 225 DGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST-------- 273
DG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 92 DGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSGEDEENCG 150
Query: 274 --------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHN 307
DD D +DE C + QC+ S CIP +
Sbjct: 151 NVTCSSDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS-SCIPIS 209
Query: 308 WLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSKFCDGKPD 365
W+CD++ DCS D +DE ++ + C +E++CG S +C+ CDG PD
Sbjct: 210 WVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPD 263
Query: 366 CSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGAMCFCPAG 405
C +G DE C ++ +CE+ C H +C+ C P
Sbjct: 264 CKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGK 323
Query: 406 QNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHLSYVCSCT 441
+C+D +ECL+ +G C C ++ + Y C C
Sbjct: 324 FKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNECLVNNGGCSHICKDSVIGYECDCA 383
Query: 442 EGYTLRPDGKSCTAVN 457
G+ L D K+C ++
Sbjct: 384 AGFEL-IDRKTCGDID 398
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 89/173 (51%), Gaps = 21/173 (12%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHN 262
+C QF C G+CI + WKCDG DC+ DGSDE N C C + +CIP+
Sbjct: 31 TKCEASQFQCTNGRCITQLWKCDGDEDCV-DGSDEKNCVKKTCAESDFVCN-NGQCIPNR 88
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQC-ALSKKCIPHNWLCDEEMDCSTD 319
W CD + DC D +DE ++ H C ++ C A S +CIP +W CD E DC +
Sbjct: 89 WQCDGDPDCE-----DGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGESDCDSG 143
Query: 320 DIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ +N V C +E C SS +C++ + C+G+ DCS+G DE
Sbjct: 144 EDEENC----------GNVTCSSDEFTC-SSGRCISRNFVCNGQDDCSDGSDE 185
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASRTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>sp|P98155|VLDLR_HUMAN Very low-density lipoprotein receptor OS=Homo sapiens GN=VLDLR PE=1
SV=1
Length = 873
Score = 138 bits (348), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C +E+ CG+ S QC+ +S CDG+ DC +GEDE N C+P +F+C G+CI ++
Sbjct: 113 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEENCGNITCSPDEFTCSSGRCISRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-SDGSDELDCAPPTCGAHEFQCSTSS-CIPISWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPASEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
CN + DC N CSH C G C C AG + ++
Sbjct: 334 ISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 105 bits (263), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 159/383 (41%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
G+ C P++ +C ++ +C+ L CDG DC +G DE C F C G+C
Sbjct: 26 GTGRKAKCEPSQFQC-TNGRCITLLWKCDGDEDCVDGSDEKNCVKKTCAESDFVCNNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDCST- 273
+P WKCDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC +
Sbjct: 85 VPSRWKCDGDPDC-EDGSDESPEQCHMRTCRIHEISCGAHSTQCIPVSWRCDGENDCDSG 143
Query: 274 ---------------------------------DDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSPDEFTCSSGRCISRNFVCNGQDDCSDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPISWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPASEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFI--QQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++ K I N + A+ + +++ + + +S L + L NS DL
Sbjct: 497 SIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT +IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTADIQWPNGITLDLIKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>sp|P98156|VLDLR_MOUSE Very low-density lipoprotein receptor OS=Mus musculus GN=Vldlr PE=1
SV=1
Length = 873
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 168/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ +S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPVSWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC+ S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCSTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 MSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 157/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCADGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPVSWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC+ S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCSTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CG S +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCG-SGECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVDA-----------------------DECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDMSKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L A+ L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGAKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>sp|P98166|VLDLR_RAT Very low-density lipoprotein receptor OS=Rattus norvegicus GN=Vldlr
PE=2 SV=1
Length = 873
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 166/367 (45%), Gaps = 75/367 (20%)
Query: 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C NE+ CG+ S QC+ S CDG+ DC NGEDE N C+ +F+C G+C+ ++
Sbjct: 113 CRINEISCGARSTQCIPESWRCDGENDCDNGEDEENCGNITCSADEFTCSSGRCVSRNFV 172
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC +DGSDE + C + QC S CIP +W+CD++ DCS D +DE
Sbjct: 173 CNGQDDC-DDGSDELDCAPPTCGAHEFQCRTSS-CIPLSWVCDDDADCS-----DQSDES 225
Query: 284 WDK-------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHN 336
++ +C ++QC S +CI W CD + DC D +DE +
Sbjct: 226 LEQCGRQPVIHTKCPTSEIQCG-SGECIHKKWRCDGDPDCK-----DGSDE-----VNCP 274
Query: 337 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GP------------ 374
+ C P++ C C+ S+ C+G DC +G DE GP
Sbjct: 275 SRTCRPDQFEC-EDGSCIHGSRQCNGIRDCVDGSDEVNCKNVNQCLGPGKFKCRSGECID 333
Query: 375 ---FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQ 412
C+ + DC N CSH C G C C AG + ++
Sbjct: 334 ITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVIGYECDCAAGFELIDRKT 393
Query: 413 CVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTV 472
C D DEC G C Q C N Y C C+ GY + C AV EP S+IF++
Sbjct: 394 CGDIDECQNPGICSQICINLKGGYKCECSRGYQMDLATGVCKAVG---KEP-SLIFTNRR 449
Query: 473 DIRRIHL 479
DIR+I L
Sbjct: 450 DIRKIGL 456
Score = 100 bits (249), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 106/383 (27%), Positives = 156/383 (40%), Gaps = 93/383 (24%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
S C ++ +C ++ +C+ L CDG DC++G DE C F C G+C
Sbjct: 26 ASGKKAKCDSSQFQC-TNGRCITLLWKCDGDEDCTDGSDEKNCVKKTCAESDFVCKNGQC 84
Query: 218 IPESWKCDGFVDCLEDGSDE-PNTC-IHQCFNGQVQC-ALSKKCIPHNWLCDEEMDC--- 271
+P W+CDG DC EDGSDE P C + C ++ C A S +CIP +W CD E DC
Sbjct: 85 VPNRWQCDGDPDC-EDGSDESPEQCHMRTCRINEISCGARSTQCIPESWRCDGENDCDNG 143
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
DD D +DE C + QC S
Sbjct: 144 EDEENCGNITCSADEFTCSSGRCVSRNFVCNGQDDCDDGSDELDCAPPTCGAHEFQCRTS 203
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV--LCHPNELRCGSSNQCVALSK 358
CIP +W+CD++ DCS D +DE ++ + C +E++CGS +C+
Sbjct: 204 -SCIPLSWVCDDDADCS-----DQSDESLEQCGRQPVIHTKCPTSEIQCGSG-ECIHKKW 256
Query: 359 FCDGKPDCSNGEDE----GPFCN-NKADCENLKCSH---KCSPT------------PRGA 398
CDG PDC +G DE C ++ +CE+ C H +C+
Sbjct: 257 RCDGDPDCKDGSDEVNCPSRTCRPDQFECEDGSCIHGSRQCNGIRDCVDGSDEVNCKNVN 316
Query: 399 MCFCPAGQNPNKTQCVD-----------------------ADECLI-DGSCDQTCTNTHL 434
C P +C+D +ECL+ +G C C + +
Sbjct: 317 QCLGPGKFKCRSGECIDITKVCDQEQDCRDWSDEPLKECHINECLVNNGGCSHICKDLVI 376
Query: 435 SYVCSCTEGYTLRPDGKSCTAVN 457
Y C C G+ L D K+C ++
Sbjct: 377 GYECDCAAGFEL-IDRKTCGDID 398
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 39 NTDEDWDKYFKRILN--GTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDL 96
+ D+ ++FK I N +A+++ ++ + +S L + L NS DL
Sbjct: 497 SIDDKVGRHFKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVATLDGTKRKFLFNS-DL 555
Query: 97 PAPEIFPLD--------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
P +D ++EKAGM+G +R PLVT++IQWP+ + +D + LY
Sbjct: 556 REPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTEDIQWPNGITLDLVKSRLY 615
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
W DS L+ + SV ++G ++ E
Sbjct: 616 WLDSKLHMLSSVDLNGQDRRIVLKSLEF 643
>sp|Q28832|LDLR_PIG Low-density lipoprotein receptor (Fragment) OS=Sus scrofa GN=LDLR
PE=1 SV=2
Length = 811
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 153/334 (45%), Gaps = 39/334 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C+A CD DC +G DE C P F C CIPE W C
Sbjct: 78 CSQDEFRC-QDGKCIAPKFVCDSDRDCLDGSDEASCPTPTCGPASFQCNSSTCIPELWAC 136
Query: 225 DGFVDCLEDGSDE------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 272
DG DC EDGSDE P + C + C S +CI +W CD + DC
Sbjct: 137 DGDPDC-EDGSDEWPQHCRSHSSSLPERSNNPCSALEFHCH-SGECIHSSWRCDGDTDCK 194
Query: 273 TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 195 -----DKSDEENCDVATCRPDEFQCS-DGTCIHGSRQCDREYDCK-----DMSDEQ---- 239
Query: 333 FSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK--CSH 389
NA LC PN+ +C S +C++L K C+ DC + DE +C + K CSH
Sbjct: 240 GCVNATLCEGPNKFKC-QSGECISLDKVCNSVRDCRDWSDEPLKECGTNECLDNKGGCSH 298
Query: 390 KCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP 448
C+ G C CP G Q +K +C D DEC +C Q C N SY C C EG+ L P
Sbjct: 299 ICNDLKIGYECLCPEGFQLVDKHRCEDIDECQDPDACSQICVNLEGSYKCQCEEGFQLEP 358
Query: 449 DGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C A+ A + F++ ++R++ L+ S
Sbjct: 359 LTKACKAIGT----IAYLFFTNRHEVRKMTLDRS 388
Score = 88.2 bits (217), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 132/330 (40%), Gaps = 77/330 (23%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEG--PFCNAECTPGQFSCG--MGKCIPESWKCDGFVDCL 231
+C++ CDG +C +G DE + C G FSCG + +CIPESW+CDG DC
Sbjct: 6 GKCISYKWICDGNTECKDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCDGQQDC- 64
Query: 232 EDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
E+GSDE C + +C KCI ++CD + DC +D +DE C
Sbjct: 65 ENGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSDEASCPTPTCG 118
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY-FSHNAVL-------CHPN 343
QC S CIP W CD + DC D +DE W ++ SH++ L C
Sbjct: 119 PASFQCN-SSTCIPELWACDGDPDCE-----DGSDE-WPQHCRSHSSSLPERSNNPCSAL 171
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKA 380
E C S +C+ S CDG DC + DE C+ +
Sbjct: 172 EFHC-HSGECIHSSWRCDGDTDCKDKSDEENCDVATCRPDEFQCSDGTCIHGSRQCDREY 230
Query: 381 DCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD----------------------- 417
DC+++ C +C P +C+ D
Sbjct: 231 DCKDMSDEQGCV---NATLCEGPNKFKCQSGECISLDKVCNSVRDCRDWSDEPLKECGTN 287
Query: 418 ECLID-GSCDQTCTNTHLSYVCSCTEGYTL 446
ECL + G C C + + Y C C EG+ L
Sbjct: 288 ECLDNKGGCSHICNDLKIGYECLCPEGFQL 317
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEP-NTCIH-QCFNGQVQC-ALSKKCIPHNWLCD 266
F C GKCI W CDG +C +DGSDE TC+ C G C +CIP +W CD
Sbjct: 1 FQCQDGKCISYKWICDGNTEC-KDGSDESLETCMSVTCKIGDFSCGGRVNRCIPESWRCD 59
Query: 267 EEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 326
+ DC + +DE+ C + +C KCI ++CD + DC +D +D
Sbjct: 60 GQQDCE-----NGSDEEGCSPKTCSQDEFRCQ-DGKCIAPKFVCDSDRDC-----LDGSD 108
Query: 327 EDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
E S C P +C SS C+ CDG PDC +G DE P
Sbjct: 109 E-----ASCPTPTCGPASFQCNSST-CIPELWACDGDPDCEDGSDEWP 150
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPL 104
Y+ + GT ++A + ++L Q++ + ++ + W PA
Sbjct: 460 YWTDSILGTVSVADTKGVKRKTL--FQEKGSKPRAIVVDPVHGFMYWTDWGTPA------ 511
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV- 163
+++K G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 512 --KIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKTV 569
Query: 164 ------LCHPNEL 170
L HP L
Sbjct: 570 LEDKTKLAHPFSL 582
>sp|Q9JI18|LRP1B_MOUSE Low-density lipoprotein receptor-related protein 1B OS=Mus musculus
GN=Lrp1b PE=2 SV=1
Length = 4599
Score = 133 bits (335), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C P S +C++ CD DC + DE C C QF C G+CIP W C
Sbjct: 967 CEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE-VGCVHSCLDDQFRCSSGRCIPGHWAC 1025
Query: 225 DGFVDCLEDGSDEPNT-CIHQ-------CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
DG DC D SDE + C + C + QC CIP W CD E DC
Sbjct: 1026 DGDNDC-GDFSDETHINCTKEEARSPAGCIGNEFQCRPDGNCIPDLWRCDGEKDCE---- 1080
Query: 277 VDNTDEDW--DKFHQC-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE C + C + +CI + W+CD ++DC D +DE+
Sbjct: 1081 -DGSDEKGCNGTIRLCDHKTKFSCRSTGRCINNAWVCDGDVDCE-----DQSDEE----- 1129
Query: 334 SHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCS 392
++ LC P + C + ++ C+ K C+G+ DC +G DEG C ++ N CS+ CS
Sbjct: 1130 DCDSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLC-DECSLNNGGCSNHCS 1188
Query: 393 PTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
P RG +C CP G K C D C C Q C CSC EG+ L D
Sbjct: 1189 VVPGRGIVCSCPEGHQLKKDNRTCEIVDYCASHLRCSQVCEQQKHMVKCSCYEGWALGTD 1248
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
G+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1249 GESCTSVDSFE---AFIIFSIRHEIRRIDLH 1276
Score = 120 bits (302), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 97/198 (48%), Gaps = 8/198 (4%)
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H C G+ C C+ +WLCD + DC D +DE D + C N + C
Sbjct: 30 HLCDPGEFLCHDHVTCVSQSWLCDGDPDCP-----DQSDESLDTCPEEVEIKCPLNHIAC 84
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-DCENLKCSHKCSPTPRGAMCFCPAG- 405
S+ CV LSK C+G DC +G DEG C C+ L C KC+ C+C G
Sbjct: 85 HGSSACVHLSKLCNGVVDCPDGFDEGGHCQELLPSCQQLNCQFKCAMVRNATRCYCEDGF 144
Query: 406 -QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPA 464
+ C D DEC I G C QTC NT+ SY CSC EGY ++ D +SC + P D+
Sbjct: 145 EVAEDGRSCKDQDECSIYGICSQTCKNTYGSYACSCVEGYIMQSDNRSCKVKHEPTDKAP 204
Query: 465 SIIFSSTVDIRRIHLNGS 482
++ SS I ++NGS
Sbjct: 205 MLLISSLETIELFYINGS 222
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 121/400 (30%), Positives = 157/400 (39%), Gaps = 97/400 (24%)
Query: 170 LRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNA-ECTPGQFSCGMGKCIPESWKCDG 226
+RC S++ CV S CDG DC + DE P N +C F C G+CI +W CDG
Sbjct: 2644 IRCNSTSLCVLPSWICDGSNDCGDYSDELKCPVQNKHKCEENYFGCPSGRCILNTWVCDG 2703
Query: 227 FVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
DC EDG DE + C C Q C++ KKCI +W+CD E DC D +D +D
Sbjct: 2704 QKDC-EDGLDELH-CDSSCSWNQFACSV-KKCISKHWICDGEDDCG--DSLDESDSICGA 2758
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDC-------STDDIVDNTDEDWDKYFSHNAV- 338
C C S C+P +WLCD E DC S+ N D + + HN V
Sbjct: 2759 V-TCAADMFSCQGSHACVPQHWLCDGERDCPDGSDELSSAGCAPNNTCDENAFMCHNKVC 2817
Query: 339 --------------------------LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C P E RC V CDG DC + DE
Sbjct: 2818 IPKQFVCDHDDDCGDGSDEFLQCGYRQCGPEEFRCADGRCLVNTLWQCDGDFDCPDSSDE 2877
Query: 373 GP-----------------------------FCNNKADCENLK----------------- 386
P C+ + DC +
Sbjct: 2878 APINPRCRSAEHSCNSSFFMCKNGRCIPSDGLCDIRDDCGDGSDETNCHINECLSKKISG 2937
Query: 387 CSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEG 443
CS C P C C G ++ KT CVD DEC C Q C NT+ +Y C C EG
Sbjct: 2938 CSQDCQDLPVSYKCKCWPGFQLKDDGKT-CVDIDECSSGFPCSQQCINTYGTYKCHCAEG 2996
Query: 444 YTLRPDG-KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
Y +PD C +++ DE +I + +IR+I +GS
Sbjct: 2997 YETQPDNPNGCRSLS---DEEPFLILADQHEIRKISTDGS 3033
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/368 (29%), Positives = 144/368 (39%), Gaps = 91/368 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+WCD + + D + C ++ +C S+ QC++ CDG DC GEDE
Sbjct: 3532 FWCDGEFDCADGS--DEKNCETSCSKDQFQC-SNGQCLSAKWKCDGHEDCKYGEDEK--- 3585
Query: 202 NAE-----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
N E C+ ++ C G C+ S KC+G DC+ DGSDE + C+ +C Q QC
Sbjct: 3586 NCEPAFPVCSSSEYMCASGGCLSASLKCNGEPDCV-DGSDEMD-CVIECKEDQFQCKNKA 3643
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA------LSKKCIPHNWLC 310
CIP WLCD DC VD +DE+ C G C + C H W+C
Sbjct: 3644 YCIPIRWLCDGIYDC-----VDGSDEE-----TCGRGGSICRDDEFLCNNSLCKLHFWVC 3693
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE-LRCGSSNQCVALSKFCDGKPDCSNG 369
D E DC DN+DE D LC P RC + C+ L K C+G DC +
Sbjct: 3694 DGEDDCG-----DNSDEAPDMCVK---FLCPPTRPYRCRNDRICLQLEKICNGINDCGDN 3745
Query: 370 EDE-----------GPFCNNKADCENLKC------------------SHKCSPTP----- 395
DE P ++ C N C C TP
Sbjct: 3746 SDEEHCSGKLSLKSKPCKKDEFTCSNRNCIPMELQCDSLDDCGDGSDEQGCLKTPIEHTC 3805
Query: 396 -----------------RGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
C C G +N +C D +ECL+ G C C NT SY
Sbjct: 3806 ENNGNPCGDDAYCNQIKTSVFCRCKPGFQRNMKGRECADLNECLLFGICSHHCLNTRGSY 3865
Query: 437 VCSCTEGY 444
C C + +
Sbjct: 3866 KCVCDQNF 3873
Score = 96.7 bits (239), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C +C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFKCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C GQ +C +KKCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLRCNGQDDCG-----DEEDEK 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDNQNDCSDNSDE 3507
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDEKDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DED + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDED-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C S+ CV+ +CDG+ DC++G DE
Sbjct: 3519 DFLC-SNGDCVSSRFWCDGEFDCADGSDE 3546
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEEDEKDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDNQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K C C+ + C+ + CD E DC+ D +DE + C
Sbjct: 3508 DNCKPQTCTLKDFLCS-NGDCVSSRFWCDGEFDCA-----DGSDE------KNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ +C S+ QC++ CDG DC GEDE
Sbjct: 3556 DQFQC-SNGQCLSAKWKCDGHEDCKYGEDE 3584
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 108/258 (41%), Gaps = 39/258 (15%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+CV K CDG DC + DE + C+ +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCVPHGKLCDGTNDCGDSSDELDCKVSTCSTVEFRCADGTCIPRSARCNQNMDC-SDASD 2621
Query: 237 EP---NT-CIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E NT C H G ++C + C+ +W+CD DC D D
Sbjct: 2622 EKGCNNTDCTHFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFGCP-SGRCILNTWVCDGQKDCE-----DGLDE------LHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEG-PFCNN---KADCENLKCSHKCSPT--------- 394
S +C++ CDG+ DC + DE C AD + + SH C P
Sbjct: 2728 -SVKKCISKHWICDGEDDCGDSLDESDSICGAVTCAADMFSCQGSHACVPQHWLCDGERD 2786
Query: 395 -PRGAMCFCPAGQNPNKT 411
P G+ AG PN T
Sbjct: 2787 CPDGSDELSSAGCAPNNT 2804
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/211 (32%), Positives = 98/211 (46%), Gaps = 17/211 (8%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFC-NAECTPGQFSCGMGKCIPESWKCD 225
+E CG+ + CV CDG P C + DE +C N C G C +C+P CD
Sbjct: 2514 SEFECGNGD-CVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCD 2572
Query: 226 GFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTD- 281
G DC D SDE + + C + +CA CIP + C++ MDC S + +NTD
Sbjct: 2573 GTNDC-GDSSDELDCKVSTCSTVEFRCA-DGTCIPRSARCNQNMDCSDASDEKGCNNTDC 2630
Query: 282 EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH 341
+ K G ++C + C+ +W+CD DC D +DE K N C
Sbjct: 2631 THFYKLGVKSTGFIRCNSTSLCVLPSWICDGSNDCG-----DYSDE--LKCPVQNKHKCE 2683
Query: 342 PNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
N C S +C+ + CDG+ DC +G DE
Sbjct: 2684 ENYFGC-PSGRCILNTWVCDGQKDCEDGLDE 2713
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 132/370 (35%), Gaps = 109/370 (29%)
Query: 90 LLNSWDLPAPEIFPLDER--------------LEKAGMHGENRSPLVTKNIQWPSSLVID 135
+L S L P LD R + + GM G N+S ++ I P +L ID
Sbjct: 3123 VLVSKRLKFPRDLSLDPRAGNLYWIDCCEYPHIGRVGMDGTNQSVVIETKISRPMALTID 3182
Query: 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF------CDGKP 189
Y LYW D N +E +DGSH + PN+ G +AL+ F DGK
Sbjct: 3183 YVNHRLYWADE--NHIEFSNMDGSHRHKV--PNQDIPG----VIALTLFEDYIYWTDGKT 3234
Query: 190 DC------SNGEDEGPFCNA---------------------ECTPGQFSCG----MGKCI 218
++G D N+ CT C +G
Sbjct: 3235 KSLSRVHKTSGADRLSLINSWHAITDIQVYHSYRQPDVSKHLCTVNNGGCSHLCLLGPGK 3294
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------- 271
+ C D TC+ C Q +C + KCIP W CD DC
Sbjct: 3295 THTCACPTNFYLAADN----RTCLSNCTASQFRCK-TDKCIPFWWKCDTVDDCGDGSDEP 3349
Query: 272 ----------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKC 303
+D DN+DE H C GQ +C +KKC
Sbjct: 3350 DDCPEFKCQPGRFQCGTGLCALPAFICDGENDCGDNSDELNCDTHVCLAGQFKCTKNKKC 3409
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
IP N C+ + DC DE+ +K N+ C P+ +C ++ C++ CD
Sbjct: 3410 IPVNLRCNGQDDCG--------DEEDEKDCPENS--CSPDYFQCKTTKHCISKLWVCDED 3459
Query: 364 PDCSNGEDEG 373
PDC++ DE
Sbjct: 3460 PDCADASDEA 3469
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 108/265 (40%), Gaps = 47/265 (17%)
Query: 186 DGKPDCSNGEDEGPFCNAECTP--------GQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
DG+ +CS D N C +F CG G C+ CDG C + ++
Sbjct: 2484 DGRVNCSCRGDRVLLANNRCVTKNSSCNIYSEFECGNGDCVDYVLTCDGIPHCKDKSDEK 2543
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
C ++ + +++C+PH LCD DC D++DE K C + +C
Sbjct: 2544 LLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDCG-----DSSDELDCKVSTCSTVEFRC 2598
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE----DWDKYFSHNAVLCHPNELRCGSSNQC 353
A CIP + C++ MDCS D +DE + D + + +RC S++ C
Sbjct: 2599 A-DGTCIPRSARCNQNMDCS-----DASDEKGCNNTDCTHFYKLGVKSTGFIRCNSTSLC 2652
Query: 354 VALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC----SHKCSPTPRGAMCFCPAGQNPN 409
V S CDG DC + DE LKC HKC G CP+G+
Sbjct: 2653 VLPSWICDGSNDCGDYSDE------------LKCPVQNKHKCEENYFG----CPSGRCIL 2696
Query: 410 KTQCVDADECLIDG----SCDQTCT 430
T D + DG CD +C+
Sbjct: 2697 NTWVCDGQKDCEDGLDELHCDSSCS 2721
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 85 AQINDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDI 140
A + D +N W D +I R+EKA M G NR VT + WP+ L +D++
Sbjct: 649 AIVVDPVNGWMYWTDWKEDKIDDSVGRIEKAWMDGVNRQVFVTSKMLWPNGLTLDFHTST 708
Query: 141 LYWCDSHLNTVESVRVDGSHNAVLCHPNEL 170
LYWCD++ + +E V ++G+H V+ EL
Sbjct: 709 LYWCDAYYDHIEKVFLNGTHRKVVYSGKEL 738
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 79/169 (46%), Gaps = 15/169 (8%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI-HQCFNGQVQCALSKKCIPHNW 263
C PG+F C CI WKCDG DCL+ ++ TC H C + Q +C + +CIP W
Sbjct: 845 CKPGEFRCKNKHCIQARWKCDGDDDCLDGSDEDSVTCFNHSCPDDQFKCQ-NNRCIPKRW 903
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
LCD DC +++ D +++ C Q C + +CIP WLCD E DC D
Sbjct: 904 LCDGANDCGSNE--DESNQTCTA-RTCQADQFSCG-NGRCIPTAWLCDREDDCG-----D 954
Query: 324 NTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
TDE F C P S +C++ CD DC + DE
Sbjct: 955 QTDEVASCEFP----TCEPLTQFICKSGRCISNKWHCDTDDDCGDRSDE 999
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD-GSHNAVL 164
+ KA + G + +V+ I WP+ + IDY ++ LYWCD+ + +E + +D G++ VL
Sbjct: 2021 IGKARLDGSEKVMIVSVGITWPNGISIDYEENKLYWCDARSDKIERIDLDTGANREVL 2078
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDG 158
+E+A M G R LV KN+Q P+ L +D+ + +YW D L+ + SV DG
Sbjct: 4052 IEEAAMDGTLRRVLVQKNLQRPTGLTVDHFGERIYWADFELSIIGSVLYDG 4102
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 109/313 (34%), Gaps = 55/313 (17%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A + G+N +V+ +I P+ L ID+ + LY+ D L +E DGS V+
Sbjct: 2344 IMRATLTGKNAHVVVSTDILTPNGLTIDHRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2403
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2404 GPGTFLSLAVYDSYIFWSDWGRRAILRSNKYTGGETKILRSDIPHQPMGIIAVANDTNSC 2463
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD--EEMD 270
+ C + C DG ++ G + +C+ N C+ E +
Sbjct: 2464 ELSPCALLNGGCHDLCLLTPDGR------VNCSCRGDRVLLANNRCVTKNSSCNIYSEFE 2517
Query: 271 CSTDDIVDNT----------DEDWDKFHQCFNGQVQCAL----SKKCIPHNWLCDEEMDC 316
C D VD D+ +K C N + +++C+PH LCD DC
Sbjct: 2518 CGNGDCVDYVLTCDGIPHCKDKSDEKLLYCENRSCRSGFKPCYNRRCVPHGKLCDGTNDC 2577
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 376
D++DE C E RC + C+ S C+ DCS+ DE
Sbjct: 2578 G-----DSSDE-----LDCKVSTCSTVEFRC-ADGTCIPRSARCNQNMDCSDASDE---- 2622
Query: 377 NNKADCENLKCSH 389
C N C+H
Sbjct: 2623 ---KGCNNTDCTH 2632
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 148 LNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFCN 202
L E + V + + LC P E C CV+ S CDG PDC + DE
Sbjct: 15 LPNAEVLIVGANQDQHLCDPGEFLCHDHVTCVSQSWLCDGDPDCPDQSDESLDTCPEEVE 74
Query: 203 AECTPGQFSC-GMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-----QCFNGQVQCALSK 256
+C +C G C+ S C+G VDC DG DE C Q N Q +CA+ +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDC-PDGFDEGGHCQELLPSCQQLNCQFKCAMVR 133
Score = 41.6 bits (96), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPG------QFSCGMGK 216
+ C N + C S+ CV LSK C+G DC +G DEG C E P QF C M +
Sbjct: 75 IKCPLNHIACHGSSACVHLSKLCNGVVDCPDGFDEGGHCQ-ELLPSCQQLNCQFKCAMVR 133
Query: 217 CIPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 134 NATRCYCEDGF-EVAEDG 150
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ + G NR+ +V + PS+L +D ++YW D +L+ V V G + +
Sbjct: 350 KIERCDLDGMNRTRIVYSKAEQPSALALDLVNRLVYWVDLYLDYVGVVDYQGKNRHTIVQ 409
Query: 167 PNELR 171
+++
Sbjct: 410 GRQVK 414
Score = 37.0 bits (84), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 102 FPLDERLEKAGMHGENRSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
FP R+E A M G R + K WP+ L +D+ + + W D+ + + S DG+
Sbjct: 1401 FP---RIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFERRIVWTDARSDAIYSAFYDGT 1457
Query: 160 HNAVLCHPNEL 170
+ + +E
Sbjct: 1458 NMIEIIRGHEY 1468
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 25/109 (22%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHG 115
+T+AL+F H NQSL + +V R+ ++++ S + A E+
Sbjct: 1289 NTIALDF-HFNQSLLY--WTDVVEDRIYRGKLSE---SGGVSAIEV-------------- 1328
Query: 116 ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+V + P L +D+ +YW DS+L+ +E ++DGS A L
Sbjct: 1329 -----VVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVSKLDGSLRATL 1372
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
C +L C C P GA C CP G+ C D+ L+D SC TC N
Sbjct: 4176 CLDLSCDFLCLLNPSGATCICPEGKYMMNGTC--HDDSLLDDSCKLTCEN 4223
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ A M G N S ++ +N + P L IDY ++ LYW S T+ +DG + V+
Sbjct: 1715 INMANMDGSN-SKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCNLDGGNLEVI 1770
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 161 NAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
++ LC P + C + ++ C+ K C+G+ DC +G DEG C+ EC+ C
Sbjct: 1132 DSFLCGPPKYPCANDTSVCLQPEKLCNGRKDCPDGSDEGDLCD-ECSLNNGGC 1183
Score = 32.7 bits (73), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 35
H C GQ +C +KKCIP N C+ + DC ++
Sbjct: 3394 HVCLAGQFKCTKNKKCIPVNLRCNGQDDCGDEE 3426
>sp|Q9NZR2|LRP1B_HUMAN Low-density lipoprotein receptor-related protein 1B OS=Homo sapiens
GN=LRP1B PE=1 SV=2
Length = 4599
Score = 132 bits (331), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/402 (30%), Positives = 170/402 (42%), Gaps = 97/402 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-PFCNAE-CTPGQFSCGMGKCIPESW 222
C ++ +C +N+C+ CDG DC + EDE C A C QFSCG G+CIP +W
Sbjct: 886 CPDDQFKC-QNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCGNGRCIPRAW 944
Query: 223 KCDGFVDCLEDGSD---------EPNT------------------------------CIH 243
CD DC + + EP T C+H
Sbjct: 945 LCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVGCVH 1004
Query: 244 QCFNGQVQCALSKKCIPHNWLCDEEMDC---STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
CF+ Q +C+ S +CIP +W CD + DC S + ++ T E+ C + QC
Sbjct: 1005 SCFDNQFRCS-SGRCIPGHWACDGDNDCGDFSDEAQINCTKEEIHSPAGCNGNEFQCHPD 1063
Query: 301 KKCIPHNWLCDEEMDCSTD--------------------------------------DIV 322
C+P W CD E DC D
Sbjct: 1064 GNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDGDIDCE 1123
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
D +DED ++ LC P + C + ++ C+ K C+GK DC +G DEG C+ +
Sbjct: 1124 DQSDED-----DCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCD-ECS 1177
Query: 382 CENLKCSHKCSPTP-RGAMCFCPAGQNPNK--TQCVDADECLIDGSCDQTCTNTHLSYVC 438
N CS+ CS P RG +C CP G NK C D C C Q C + C
Sbjct: 1178 LNNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVDYCSNHLKCSQVCEQHKHTVKC 1237
Query: 439 SCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
SC EG+ L DG+SCT+V+ + A IIFS +IRRI L+
Sbjct: 1238 SCYEGWKLDVDGESCTSVDPFE---AFIIFSIRHEIRRIDLH 1276
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 113/375 (30%), Positives = 157/375 (41%), Gaps = 70/375 (18%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219
N C N C S +C+ + CDG+ DC +G DE C++ C+ QF+C KCI
Sbjct: 2677 QNKHKCEENYFSC-PSGRCILNTWICDGQKDCEDGRDEF-HCDSSCSWNQFACSAQKCIS 2734
Query: 220 ESWKCDGFVDCLEDGSDEPNTC--IHQCFNGQVQCALSKKCIPHNWLCDEEMDC------ 271
+ W CDG DC DG DE ++ C C S+ C+P +WLCD E DC
Sbjct: 2735 KHWICDGEDDC-GDGLDESDSICGAITCAADMFSCQGSRACVPRHWLCDGERDCPDGSDE 2793
Query: 272 -STDDIVDNTDEDWDKF--------------------------------HQCFNGQVQCA 298
ST N D + F QC + CA
Sbjct: 2794 LSTAGCAPNNTCDENAFMCHNKVCIPKQFVCDHDDDCGDGSDESPQCGYRQCGTEEFSCA 2853
Query: 299 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSS------NQ 352
+ + W CD + DC D++DE + C E C SS +
Sbjct: 2854 DGRCLLNTQWQCDGDFDCP-----DHSDE------APLNPKCKSAEQSCNSSFFMCKNGR 2902
Query: 353 CVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSHKCSPTPRGAMCFCPAG---QNP 408
C+ CD K DC +G DE N+ + + CS C P C C G ++
Sbjct: 2903 CIPSGGLCDNKDDCGDGSDERNCHINECLSKKVSGCSQDCQDLPVSYKCKCWPGFQLKDD 2962
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG-KSCTAVNVPQDEPASII 467
KT CVD DEC C Q C NT+ +Y C CT+GY ++PD C +++ DE +I
Sbjct: 2963 GKT-CVDIDECSSGFPCSQQCINTYGTYKCLCTDGYEIQPDNPNGCKSLS---DEEPFLI 3018
Query: 468 FSSTVDIRRIHLNGS 482
+ +IR+I +GS
Sbjct: 3019 LADHHEIRKISTDGS 3033
Score = 113 bits (282), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-ADCENLKCSHKCSPTPR 396
+ C N + C +N+CV LS+ C+G DC +G DEG C ++C+ L C +KC+
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 397 GAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454
C+C G + C D DEC + G+C QTC NTH SY CSC EGY ++PD +SC
Sbjct: 135 STRCYCEDGFEITEDGRSCKDQDECAVYGTCSQTCRNTHGSYTCSCVEGYLMQPDNRSCK 194
Query: 455 AVNVPQDEPASIIFSSTVDIRRIHLNGS 482
A P D P ++ ++ I +LNGS
Sbjct: 195 AKIEPTDRPPILLIANFETIEVFYLNGS 222
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 145/370 (39%), Gaps = 89/370 (24%)
Query: 142 YWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-- 199
+WCD + + D + C ++ RC S+ QC+ CDG DC GEDE
Sbjct: 3532 FWCDGDFDCADGS--DERNCETSCSKDQFRC-SNGQCIPAKWKCDGHEDCKYGEDEKSCE 3588
Query: 200 FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCI 259
+ C+ ++ C CI S KC+G DC DGSDE + C+ +C Q +C CI
Sbjct: 3589 PASPTCSSREYICASDGCISASLKCNGEYDC-ADGSDEMD-CVTECKEDQFRCKNKAHCI 3646
Query: 260 PHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEE 313
P WLCD DC VD +DE+ C G C + C H W+CD E
Sbjct: 3647 PIRWLCDGIHDC-----VDGSDEE-----NCERGGNICRADEFLCNNSLCKLHFWVCDGE 3696
Query: 314 MDCS--------------------------------------TDDIVDNTDEDW-DKYFS 334
DC D+ DN+DED +
Sbjct: 3697 DDCGDNSDEAPDMCVKFLCPSTRPHRCRNNRICLQSEQMCNGIDECGDNSDEDHCGGKLT 3756
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-----GPF----------CNNK 379
+ A C +E C S+ +C+ + CD DC +G DE P C +
Sbjct: 3757 YKARPCKKDEFAC-SNKKCIPMDLQCDRLDDCGDGSDEQGCRIAPTEYTCEDNVNPCGDD 3815
Query: 380 ADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
A C +K S C C G +N QC D +ECL+ G+C C N SY
Sbjct: 3816 AYCNQIKTS---------VFCRCKPGFQRNMKNRQCEDLNECLVFGTCSHQCINVEGSYK 3866
Query: 438 CSCTEGYTLR 447
C C + + R
Sbjct: 3867 CVCDQNFQER 3876
Score = 95.9 bits (237), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 101/209 (48%), Gaps = 19/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-NAECTPGQFSCGMGKCIPESWK 223
C ++ RC +++C+ CD DC +G DE C C PG+F CG G C ++
Sbjct: 3317 CTASQFRC-KTDKCIPFWWKCDTVDDCGDGSDEPDDCPEFRCQPGRFQCGTGLCALPAFI 3375
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG DC D SDE N H C +GQ +C ++KCIP N C+ + DC D DE
Sbjct: 3376 CDGENDC-GDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLRCNGQDDCG-----DEEDER 3429
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
+ C QC +K CI W+CDE+ DC+ N D+ C P+
Sbjct: 3430 DCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCADASDEANCDKK----------TCGPH 3479
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
E +C +N C+ CD + DCS+ DE
Sbjct: 3480 EFQC-KNNNCIPDHWRCDSQNDCSDNSDE 3507
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 100/210 (47%), Gaps = 21/210 (10%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPESW 222
+C + +C + +C+ ++ C+G+ DC + EDE C+P F C K CI + W
Sbjct: 3395 VCLSGQFKCTKNQKCIPVNLRCNGQDDCGDEEDERDCPENSCSPDYFQCKTTKHCISKLW 3454
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CD DC D SDE N C + QC + CIP +W CD + DCS DN+DE
Sbjct: 3455 VCDEDPDC-ADASDEANCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDE 3507
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
+ K C CA + C+ + CD + DC+ D +DE + C
Sbjct: 3508 ENCKPQTCTLKDFLCA-NGDCVSSRFWCDGDFDCA-----DGSDE------RNCETSCSK 3555
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ RC S+ QC+ CDG DC GEDE
Sbjct: 3556 DQFRC-SNGQCIPAKWKCDGHEDCKYGEDE 3584
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 127/338 (37%), Gaps = 86/338 (25%)
Query: 202 NAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIP 260
N C QF C +CIP+ W CDG DC + + TC + C Q C + +CIP
Sbjct: 883 NHSCPDDQFKCQNNRCIPKRWLCDGANDCGSNEDESNQTCTARTCQVDQFSCG-NGRCIP 941
Query: 261 HNWLCDEEMDCS--TDDIVD---NTDEDWDKF---------------------------- 287
WLCD E DC TD++ T E +F
Sbjct: 942 RAWLCDREDDCGDQTDEMASCEFPTCEPLTQFVCKSGRCISSKWHCDSDDDCGDGSDEVG 1001
Query: 288 --HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
H CF+ Q +C+ S +CIP +W CD + DC D D + K H+ C+ NE
Sbjct: 1002 CVHSCFDNQFRCS-SGRCIPGHWACDGDNDCG--DFSDEAQINCTKEEIHSPAGCNGNEF 1058
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------------------PFCNNKA----- 380
+C CV CDG+ DC +G DE C NKA
Sbjct: 1059 QCHPDGNCVPDLWRCDGEKDCEDGSDEKGCNGTIRLCDHKTKFSCWSTGRCINKAWVCDG 1118
Query: 381 -----------DCENLKCSHKCSPTPR-GAMCFCPAGQNPNKTQCVDA-------DEC-L 420
DC++ C P ++C P K C D DEC L
Sbjct: 1119 DIDCEDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCDECSL 1178
Query: 421 IDGSCDQTCTNT-HLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C+ VCSC EG L D K+C V+
Sbjct: 1179 NNGGCSNHCSVVPGRGIVCSCPEGLQLNKDNKTCEIVD 1216
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG-KCIPESWK 223
C P +CG+ C + CDG+ DC + DE C GQF C KCIP + +
Sbjct: 3357 CQPGRFQCGTG-LCALPAFICDGENDCGDNSDELNCDTHVCLSGQFKCTKNQKCIPVNLR 3415
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
C+G DC D DE + + C QC +K CI W+CDE+ DC+ D +DE
Sbjct: 3416 CNGQDDC-GDEEDERDCPENSCSPDYFQCKTTKHCISKLWVCDEDPDCA-----DASDEA 3469
Query: 284 WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN 343
C + QC + CIP +W CD + DCS DN+DE+ + C
Sbjct: 3470 NCDKKTCGPHEFQCK-NNNCIPDHWRCDSQNDCS-----DNSDEE-----NCKPQTCTLK 3518
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + + CV+ +CDG DC++G DE
Sbjct: 3519 DFLCANGD-CVSSRFWCDGDFDCADGSDE 3546
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 91/205 (44%), Gaps = 25/205 (12%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
+C+ K CDG+ DC + DE + C +F C G CIP S +C+ +DC D SD
Sbjct: 2563 RCIPHGKLCDGENDCGDNSDELDCKVSTCATVEFRCADGTCIPRSARCNQNIDC-ADASD 2621
Query: 237 EPN----TCIHQC-----FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
E N C H G ++C + C+ W+CD DC D D
Sbjct: 2622 EKNCNNTDCTHFYKLGVKTTGFIRCNSTSLCVLPTWICDGSNDCG--DYSDELKCPVQNK 2679
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRC 347
H+C C S +CI + W+CD + DC D DE H C N+ C
Sbjct: 2680 HKCEENYFSCP-SGRCILNTWICDGQKDCE-----DGRDE------FHCDSSCSWNQFAC 2727
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDE 372
S+ +C++ CDG+ DC +G DE
Sbjct: 2728 -SAQKCISKHWICDGEDDCGDGLDE 2751
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 7/164 (4%)
Query: 209 QFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
+F CG G+CI CDG C + ++ C ++ + +++CIPH LCD E
Sbjct: 2515 EFECGNGECIDYQLTCDGIPHCKDKSDEKLLYCENRSCRRGFKPCYNRRCIPHGKLCDGE 2574
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC DN+DE K C + +CA CIP + C++ +DC+ N +
Sbjct: 2575 NDCG-----DNSDELDCKVSTCATVEFRCA-DGTCIPRSARCNQNIDCADASDEKNCNNT 2628
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+F V +RC S++ CV + CDG DC + DE
Sbjct: 2629 DCTHFYKLGVKT-TGFIRCNSTSLCVLPTWICDGSNDCGDYSDE 2671
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 87 INDLLNSW----DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILY 142
+ D +N W D EI R+EKA M G NR VT + WP+ L +D++ + LY
Sbjct: 651 VVDPVNGWMYWTDWEEDEIDDSVGRIEKAWMDGFNRQIFVTSKMLWPNGLTLDFHTNTLY 710
Query: 143 WCDSHLNTVESVRVDGSHNAVLCHPNEL 170
WCD++ + +E V ++G+H ++ EL
Sbjct: 711 WCDAYYDHIEKVFLNGTHRKIVYSGREL 738
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 102/268 (38%), Gaps = 37/268 (13%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ + GM G N+S ++ I P +L IDY LYW D N +E +DGSH + P
Sbjct: 3155 IGRVGMDGTNQSVVIETKISRPMALTIDYVNRRLYWADE--NHIEFSNMDGSHRHKV--P 3210
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
N+ G +AL+ F D ++G+ + A T G + SW
Sbjct: 3211 NQDIPG----VIALTLFED-YIYWTDGKTKS-LSRAHKTSGADRLSL----IYSWHAITD 3260
Query: 228 VDCLEDGSDEPNTCIHQCFNGQVQCA---LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
+ +P+ H C C+ L H C + D+
Sbjct: 3261 IQVYH-SYRQPDVSKHLCMINNGGCSHLCLLAPGKTHTCACPTNFYLAADNRT------- 3312
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C Q +C + KCIP W CD + DD D +DE D C P
Sbjct: 3313 -CLSNCTASQFRCK-TDKCIPFWWKCD-----TVDDCGDGSDEPDD----CPEFRCQPGR 3361
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+CG+ C + CDG+ DC + DE
Sbjct: 3362 FQCGTG-LCALPAFICDGENDCGDNSDE 3388
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 118/314 (37%), Gaps = 57/314 (18%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ ++ + G+N +V+ +I P+ L IDY + LY+ D L +E DGS V+
Sbjct: 2344 IMRSTLTGKNAQVVVSTDILTPNGLTIDYRAEKLYFSDGSLGKIERCEYDGSQRHVIVKS 2403
Query: 168 NE---LRCGSSNQCVALSKFCDGKPDCSNGEDEG------------PFCNAECTPGQFSC 212
L + + S + SN G P SC
Sbjct: 2404 GPGTFLSLAVYDNYIFWSDWGRRAILRSNKYTGGDTKILRSDIPHQPMGIIAVANDTNSC 2463
Query: 213 GMGKCIPESWKC--------DGFVDCLEDGSD---EPNTCIHQCFN----GQVQCALSKK 257
+ C + C +G V+C G E N C+ + + + +C + +
Sbjct: 2464 ELSPCALLNGGCHDLCLLTPNGRVNCSCRGDRILLEDNRCVTKNSSCNAYSEFECG-NGE 2522
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
CI + CD C D +DE + + C G C +++CIPH LCD E D
Sbjct: 2523 CIDYQLTCDGIPHCK-----DKSDEKLLYCENRSCRRGFKPC-YNRRCIPHGKLCDGEND 2576
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF 375
C DN+DE C E RC + C+ S C+ DC++ DE
Sbjct: 2577 CG-----DNSDE-----LDCKVSTCATVEFRC-ADGTCIPRSARCNQNIDCADASDE--- 2622
Query: 376 CNNKADCENLKCSH 389
+C N C+H
Sbjct: 2623 ----KNCNNTDCTH 2632
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 46/95 (48%), Gaps = 15/95 (15%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV---- 163
+E+A M G R LV KN+Q P+ L +DY + +YW D L+ + SV DGS++ V
Sbjct: 4052 IEEAAMDGTLRRILVQKNLQRPTGLAVDYFSERIYWADFELSIIGSVLYDGSNSVVSVSS 4111
Query: 164 ---LCHPNEL--------RCGSSNQCVALSKFCDG 187
L HP+ + G N + KF G
Sbjct: 4112 KQGLLHPHRIDIFEDYIYGAGPKNGVFRVQKFGHG 4146
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 63/131 (48%), Gaps = 13/131 (9%)
Query: 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT----PGQFSC-GM 214
H+ C+ NE +C CV CDG+ DC +G DE CN +FSC
Sbjct: 1048 HSPAGCNGNEFQCHPDGNCVPDLWRCDGEKDCEDGSDE-KGCNGTIRLCDHKTKFSCWST 1106
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCST 273
G+CI ++W CDG +DC ED SDE + C + CA + C+ LC+ + DC
Sbjct: 1107 GRCINKAWVCDGDIDC-EDQSDEDDCDSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCP- 1164
Query: 274 DDIVDNTDEDW 284
D +DE +
Sbjct: 1165 ----DGSDEGY 1171
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD--GSHNAVLC 165
+ KA + G + LV+ I WP+ + IDY ++ LYWCD+ + +E + ++ G+ VL
Sbjct: 2021 IGKARLDGSEKVVLVSMGIAWPNGISIDYEENKLYWCDARTDKIERIDLETGGNREMVLS 2080
Query: 166 HPN 168
N
Sbjct: 2081 GSN 2083
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 34/65 (52%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
++E+ M G NR+ ++ + P++L +D ++YW D +L+ V V G + +
Sbjct: 350 KVERCDMDGMNRTRIIDSKTEQPAALALDLVNKLVYWVDLYLDYVGVVDYQGKNRHTVIQ 409
Query: 167 PNELR 171
++R
Sbjct: 410 GRQVR 414
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC-----NAECTPGQFSCGMGKC 217
+ C N + C +N+CV LS+ C+G DC +G DEG C N + Q+ C M +
Sbjct: 75 IKCPLNHIACLGTNKCVHLSQLCNGVLDCPDGYDEGVHCQELLSNCQQLNCQYKCTMVRN 134
Query: 218 IPESWKCDGFVDCLEDG 234
+ DGF + EDG
Sbjct: 135 STRCYCEDGF-EITEDG 150
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
Query: 102 FPLDERLEKAGMHGENRSPLV--TKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159
FP R+E A M G R + K WP+ L +D+ + + W D+ + + S DG+
Sbjct: 1401 FP---RIESASMSGAGRKTIYKDMKTGAWPNGLTVDHFEKRIVWTDARSDAIYSALYDGT 1457
Query: 160 HNAVLCHPNEL 170
+ + +E
Sbjct: 1458 NMIEIIRGHEY 1468
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 25/109 (22%)
Query: 56 HTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHG 115
+T+AL+F H NQSL + +V R+ ++++ S + A E+
Sbjct: 1289 NTIALDF-HFNQSLLY--WTDVVEDRIYRGKLSE---SGGVSAIEV-------------- 1328
Query: 116 ENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+V + P L +D+ +YW DS+L+ +E ++DGS L
Sbjct: 1329 -----VVEHGLATPEGLTVDWIAGNIYWIDSNLDQIEVAKLDGSLRTTL 1372
Score = 34.7 bits (78), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ A M G N S ++ +N + P L IDY ++ LYW S T+ +DG + V+
Sbjct: 1715 INMANMDGSN-SKILFQNQKEPVGLSIDYVENKLYWISSGNGTINRCNLDGGNLEVI 1770
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 382 CENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN 431
C +L C C P GA C CP G+ C D+ L+D SC TC N
Sbjct: 4176 CLDLACEFLCLLNPSGATCVCPEGKYLINGTC--NDDSLLDDSCKLTCEN 4223
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCS 32
+H CF+ Q +C+ S +CIP +W CD + DC
Sbjct: 1003 VHSCFDNQFRCS-SGRCIPGHWACDGDNDCG 1032
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 161 NAVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
++ LC P + C + ++ C+ K C+GK DC +G DEG C+ EC+ C
Sbjct: 1132 DSFLCGPPKHPCANDTSVCLQPEKLCNGKKDCPDGSDEGYLCD-ECSLNNGGC 1183
>sp|P35951|LDLR_MOUSE Low-density lipoprotein receptor OS=Mus musculus GN=Ldlr PE=1 SV=2
Length = 862
Score = 128 bits (322), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 152/333 (45%), Gaps = 38/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC +C++ CDG DC +G DE C P F C CIP W C
Sbjct: 109 CSQDDFRC-QDGKCISPQFVCDGDRDCLDGSDEAHCQATTCGPAHFRCNSSICIPSLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTCIHQ----------CFNGQVQCALSKKCIPHNWLCDEEMDCST 273
DG VDC+ DGSDE P C + C + + C S +CI +W+CD E DC
Sbjct: 168 DGDVDCV-DGSDEWPQNCQGRDTASKGVSSPCSSLEFHCG-SSECIHRSWVCDGEADCK- 224
Query: 274 DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 333
D +DE+ C + QCA CI + CD E DC D +DE
Sbjct: 225 ----DKSDEEHCAVATCRPDEFQCA-DGSCIHGSRQCDREHDCK-----DMSDE----LG 270
Query: 334 SHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHK 390
N C PN+ +C S +C++L K CD DC + DE +C N CSH
Sbjct: 271 CVNVTQCDGPNKFKC-HSGECISLDKVCDSARDCQDWSDEPIKECKTNECLDNNGGCSHI 329
Query: 391 CSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G+ C CP+G + + +C D DEC +C Q C N SY C C G+ + P
Sbjct: 330 CKDLKIGSECLCPSGFRLVDLHRCEDIDECQEPDTCSQLCVNLEGSYKCECQAGFHMDPH 389
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
+ C AV ++F++ ++R++ L+ S
Sbjct: 390 TRVCKAVG----SIGYLLFTNRHEVRKMTLDRS 418
Score = 99.4 bits (246), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 109/223 (48%), Gaps = 35/223 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+A CDG P+C +G DE P + C QFSCG + +CIP+
Sbjct: 27 CSRNEFQC-RDGKCIASKWVCDGSPECPDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDE----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 276
SW+CDG VDC E+ SDE P TC F Q KCI ++CD + DC
Sbjct: 86 SWRCDGQVDC-ENDSDEQGCPPKTCSQDDFRCQ-----DGKCISPQFVCDGDRDC----- 134
Query: 277 VDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW------- 329
+D +DE + C +C S CIP W CD ++DC VD +DE W
Sbjct: 135 LDGSDEAHCQATTCGPAHFRCN-SSICIPSLWACDGDVDC-----VDGSDE-WPQNCQGR 187
Query: 330 DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D + C E CGSS +C+ S CDG+ DC + DE
Sbjct: 188 DTASKGVSSPCSSLEFHCGSS-ECIHRSWVCDGEADCKDKSDE 229
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 83/174 (47%), Gaps = 23/174 (13%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQC-ALSKKCIPH 261
C+ +F C GKCI W CDG +C DGSDE P TC+ C + Q C +CIP
Sbjct: 27 CSRNEFQCRDGKCIASKWVCDGSPEC-PDGSDESPETCMSVTCQSNQFSCGGRVSRCIPD 85
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+W CD ++DC D +DE C +C KCI ++CD + DC
Sbjct: 86 SWRCDGQVDCEND-----SDEQGCPPKTCSQDDFRCQ-DGKCISPQFVCDGDRDC----- 134
Query: 322 VDNTDEDWDKYFSH-NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+D +DE +H A C P RC SS C+ CDG DC +G DE P
Sbjct: 135 LDGSDE------AHCQATTCGPAHFRCNSS-ICIPSLWACDGDVDCVDGSDEWP 181
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 30/176 (17%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS+K I ++ L D+ + S D I+ D DW + Y+ + G+ ++A
Sbjct: 447 LSQKKI-YSALMDQAPNLSYDTIISEDLHAPDGLAVDWIHRNIYWTDSVPGSVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPL 121
+ ++L Q+ + ++ + W PA +++K G++G + L
Sbjct: 506 VKRRTL--FQEAGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIHSL 555
Query: 122 VTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
VT+NIQWP+ + +D + LYW DS L+++ S+ V+G + L HP L
Sbjct: 556 VTENIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTILEDENRLAHPFSL 611
>sp|P20063|LDLR_RABIT Low-density lipoprotein receptor (Fragment) OS=Oryctolagus
cuniculus GN=LDLR PE=2 SV=1
Length = 837
Score = 125 bits (313), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 151/333 (45%), Gaps = 39/333 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC + C++ CDG+PDC +G DE + C P F C C+P W C
Sbjct: 96 CSQDEFRC-AEGACISRLFACDGEPDCPDGSDEASCAPSTCGPAHFRCNSSSCVPALWAC 154
Query: 225 DGFVDCLEDGSDE----------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
DG DC +DGSDE P C + C S +C+ +W CD + DC
Sbjct: 155 DGEPDC-DDGSDEWPARCGARPSPQPGRGPCSRHEFHCG-SGECVHASWRCDGDADCR-- 210
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE C + QC+ CI + CD++ DC D +DE
Sbjct: 211 ---DGSDERDCAAATCRPDEFQCS-DGTCIHGSRQCDQQQDCG-----DMSDE----VGC 257
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF---CNNKADCENLKCSHK 390
N LC P++ +C S +C++L K C+ DC + DE P N+ N CSH
Sbjct: 258 VNVTLCEGPDKFKC-HSGECISLDKVCNSARDCQDWSDE-PIKECATNECMRGNGGCSHT 315
Query: 391 CSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD 449
C G C CP G ++ +C D +EC C Q C N SY C C G+ L P
Sbjct: 316 CFDLRIGHECHCPKGYRLVDQRRCEDINECEDPDICSQLCVNLAGSYKCECRAGFQLDPH 375
Query: 450 GKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
++C AV D A + F++ ++R++ L+ S
Sbjct: 376 SQACKAV----DSIAYLFFTNRHEVRKMTLDRS 404
Score = 86.3 bits (212), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 97/218 (44%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C + +C++ CDG +C +G DE + C FSCG + +CIP
Sbjct: 14 CGRNEFQC-RNGKCISYKWVCDGSSECQDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIPG 72
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
WKCDG DC EDGSDE C + +CA CI + CD E DC D +
Sbjct: 73 HWKCDGQQDC-EDGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP-----DGS 125
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV-- 338
DE C +C S C+P W CD E DC D+ ++W
Sbjct: 126 DEASCAPSTCGPAHFRCN-SSSCVPALWACDGEPDC------DDGSDEWPARCGARPSPQ 178
Query: 339 ----LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C +E CG S +CV S CDG DC +G DE
Sbjct: 179 PGRGPCSRHEFHCG-SGECVHASWRCDGDADCRDGSDE 215
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALS-KKCIP 260
+C +F C GKCI W CDG +C +DGSDE TC+ C + C +CIP
Sbjct: 13 KCGRNEFQCRNGKCISYKWVCDGSSEC-QDGSDEWEQTCMSLTCKSDDFSCGGRLNRCIP 71
Query: 261 HNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 320
+W CD + DC D +DE C + +CA CI + CD E DC
Sbjct: 72 GHWKCDGQQDCE-----DGSDELGCAPKTCSQDEFRCA-EGACISRLFACDGEPDCP--- 122
Query: 321 IVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA 380
D +DE S C P RC SS+ CV CDG+PDC +G DE P
Sbjct: 123 --DGSDE-----ASCAPSTCGPAHFRCNSSS-CVPALWACDGEPDCDDGSDEWP------ 168
Query: 381 DCENLKCSHKCSPTPRGAMC-----FCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
+C + SP P C C +G+ + + D D DGS ++ C
Sbjct: 169 ----ARCGARPSPQPGRGPCSRHEFHCGSGECVHASWRCDGDADCRDGSDERDCA 219
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 15/131 (11%)
Query: 47 YFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE 106
Y+ + GT ++A R ++L + ++ + A W +PA
Sbjct: 476 YWTDSVLGTVSVADTRGFRRKTLFRQEGSKPRAIVVDPAHGFMYWTDWGVPA-------- 527
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV--- 163
++EK G++G + LVT++IQWP+ + +D + LYW DS L+++ S+ V+G +
Sbjct: 528 KIEKGGLNGVDVYSLVTEDIQWPNGITLDLSSGRLYWVDSKLHSISSIDVNGGNRKTVLE 587
Query: 164 ----LCHPNEL 170
L HP L
Sbjct: 588 DEQRLAHPFSL 598
>sp|P01130|LDLR_HUMAN Low-density lipoprotein receptor OS=Homo sapiens GN=LDLR PE=1 SV=1
Length = 860
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 149/332 (44%), Gaps = 37/332 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E RC +C++ CD DC +G DE C P F C CIP+ W C
Sbjct: 109 CSQDEFRC-HDGKCISRQFVCDSDRDCLDGSDEASCPVLTCGPASFQCNSSTCIPQLWAC 167
Query: 225 DGFVDCLEDGSDE-PNTC----IHQ-----CFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D DC EDGSDE P C + Q C + C LS +CI +W CD DC
Sbjct: 168 DNDPDC-EDGSDEWPQRCRGLYVFQGDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCK-- 223
Query: 275 DIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFS 334
D +DE+ C + QC+ CI + CD E DC D +DE
Sbjct: 224 ---DKSDEENCAVATCRPDEFQCS-DGNCIHGSRQCDREYDCK-----DMSDE----VGC 270
Query: 335 HNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKC 391
N LC PN+ +C S +C+ L K C+ DC + DE +C N CSH C
Sbjct: 271 VNVTLCEGPNKFKC-HSGECITLDKVCNMARDCRDWSDEPIKECGTNECLDNNGGCSHVC 329
Query: 392 SPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDG 450
+ G C CP G Q + +C D DEC +C Q C N Y C C EG+ L P
Sbjct: 330 NDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHT 389
Query: 451 KSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
K+C AV A + F++ ++R++ L+ S
Sbjct: 390 KACKAVG----SIAYLFFTNRHEVRKMTLDRS 417
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 103/218 (47%), Gaps = 26/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF--CNAECTPGQFSCG--MGKCIPE 220
C NE +C +C++ CDG +C +G DE + C G FSCG + +CIP+
Sbjct: 27 CERNEFQC-QDGKCISYKWVCDGSAECQDGSDESQETCLSVTCKSGDFSCGGRVNRCIPQ 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
W+CDG VDC ++GSDE C + +C KCI ++CD + DC +D +
Sbjct: 86 FWRCDGQVDC-DNGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDRDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK------YFS 334
DE C QC S CIP W CD + DC D +DE W + F
Sbjct: 139 DEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDE-WPQRCRGLYVFQ 191
Query: 335 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
++ C E C S +C+ S CDG PDC + DE
Sbjct: 192 GDSSPCSAFEFHC-LSGECIHSSWRCDGGPDCKDKSDE 228
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TCIH-QCFNGQVQC-AL 254
G C +F C GKCI W CDG +C +DGSDE TC+ C +G C
Sbjct: 20 GTAVGDRCERNEFQCQDGKCISYKWVCDGSAEC-QDGSDESQETCLSVTCKSGDFSCGGR 78
Query: 255 SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+CIP W CD ++DC + +DE C + +C KCI ++CD +
Sbjct: 79 VNRCIPQFWRCDGQVDCD-----NGSDEQGCPPKTCSQDEFRCH-DGKCISRQFVCDSDR 132
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC +D +DE S + C P +C SS C+ CD PDC +G DE P
Sbjct: 133 DC-----LDGSDE-----ASCPVLTCGPASFQCNSST-CIPQLWACDNDPDCEDGSDEWP 181
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 15/84 (17%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W PA +++K G++G + LVT+NIQWP+ + +D LYW DS L+++ S
Sbjct: 536 WGTPA--------KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 587
Query: 154 VRVDGSHNAV-------LCHPNEL 170
+ V+G + L HP L
Sbjct: 588 IDVNGGNRKTILEDEKRLAHPFSL 611
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 23/48 (47%)
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
+++++IQ P L +D+ +YW DS L TV G L N
Sbjct: 468 VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN 515
>sp|Q6X0I2|VGR_SOLIN Vitellogenin receptor OS=Solenopsis invicta GN=VgR PE=2 SV=1
Length = 1782
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 150/368 (40%), Gaps = 73/368 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C + C+ +K CD PDC + DE ECT +F C GKCIP ++ C
Sbjct: 1013 CKSDEFQCKFTETCIPKTKMCDSNPDCDDLSDEEDCRKVECTSNEFKCNNGKCIPNTFVC 1072
Query: 225 DGFVDCLEDGSDE-------------------PNT-----------------------CI 242
D DC EDG DE PN C+
Sbjct: 1073 DNDNDC-EDGEDEAAEKCYSKIACKMPKMFKCPNGDCISDSLLCNGINDCNDGSDEVHCL 1131
Query: 243 HQCFNGQVQCALSKK-------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQV 295
V C+L++ C+P N CD + DC D D CF +
Sbjct: 1132 SNVTTHLVNCSLNEYRCLGTDICLPKNVRCDGKNDCPQSD-------DEQNCTYCFENEF 1184
Query: 296 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
C +K+CIP W+CD+ DC + N D + N +E +C S C+
Sbjct: 1185 ACD-NKRCIPELWVCDKANDCGDNSDEKNCDGSKRNFIESNEC----DEFKC-SVGTCLP 1238
Query: 356 LSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN--PNKTQC 413
SK CDG DC +G DE C N C C TP GA+C C +G + C
Sbjct: 1239 YSKVCDGNRDCPDGSDETGKCQTACTVNNF-CKGMCYKTPAGAVCGCQSGYRLAVDMISC 1297
Query: 414 VDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST-V 472
D +EC +D C Q C NT SY C C + + +R D SC AV PA + T
Sbjct: 1298 EDINECELD-ICSQMCRNTIGSYECFCKDEFIIRNDKTSCKAVG-----PAMEFITVTDN 1351
Query: 473 DIRRIHLN 480
DIR++ N
Sbjct: 1352 DIRKMTHN 1359
Score = 116 bits (290), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/293 (33%), Positives = 139/293 (47%), Gaps = 34/293 (11%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH-------QCFNGQVQCALS 255
+C G F C G+CIP KCD ++D DGSDE C H C Q +C +
Sbjct: 34 TKCEDGYFQCNSGECIPVDKKCD-YIDHCIDGSDEDFECDHLDEKSFITCAKDQFKCK-N 91
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
++CIP CD DC +D +DE D H + C CI W+CD
Sbjct: 92 QECIPAAKYCDMVNDC-----LDESDEHDGCVKHLNCTNKFLCT-DGHCINKEWVCDGRN 145
Query: 315 DCSTDDIVDNTDE---DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED 371
DC D DE +K S ++ + C ++++C++L CD K DC +G D
Sbjct: 146 DCP-----DGNDEWNCKANKTSSASSCKTENYQYMC-ANHRCISLKVVCDKKDDCGDGSD 199
Query: 372 EGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG---QNPNKTQCVDADECLIDGSCDQT 428
EGP C + +C + C C TP+G++C C G Q N+T C D DEC G CDQ
Sbjct: 200 EGPGCT-QFNCSSAGCQSNCHQTPKGSVCTCKPGYKLQKDNRT-CNDIDECQAYGICDQD 257
Query: 429 CTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
C N SY C+C Y L D ++C A + A+++FS+ I +H++
Sbjct: 258 CMNVPGSYACTCQREYYLENDKRTCKA----RAGEATLVFSTRTSILGMHVDS 306
Score = 96.7 bits (239), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 16/210 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN--AECTPGQFSCGMGKCIPESW 222
C NE +C N C+ ++ CDG +C NGEDE C C QF C G CI
Sbjct: 932 CSKNEYKCSEHNICIQRNQLCDGIENCPNGEDETSECRIKGRCKENQFMCKNGDCIRLKD 991
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
+C+ DC D SDE N +C + + QC ++ CIP +CD DC DD+ D +E
Sbjct: 992 RCNSRYDC-TDQSDEQNCEKPKCKSDEFQCKFTETCIPKTKMCDSNPDC--DDLSD--EE 1046
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
D K +C + + +C + KCIP+ ++CD + DC D DE +K +S A P
Sbjct: 1047 DCRKV-ECTSNEFKCN-NGKCIPNTFVCDNDNDCE-----DGEDEAAEKCYSKIACK-MP 1098
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C + + C++ S C+G DC++G DE
Sbjct: 1099 KMFKCPNGD-CISDSLLCNGINDCNDGSDE 1127
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 102 FPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN 161
FP + AGM G+N V ++WP S+ IDY + LYW D+ +ESVR+DG+
Sbjct: 427 FP---HIAVAGMDGKNVRIFVNVKLEWPKSVTIDYPNERLYWVDAKSKMIESVRLDGTDR 483
Query: 162 AVLCH 166
++ H
Sbjct: 484 RIVLH 488
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
V C NE RC ++ C+ + CDGK DC +DE C +F+C +CIPE W
Sbjct: 1139 VNCSLNEYRCLGTDICLPKNVRCDGKNDCPQSDDEQNC--TYCFENEFACDNKRCIPELW 1196
Query: 223 KCDGFVDCLEDGSDEPN------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
CD DC D SDE N I + +C++ C+P++ +CD DC
Sbjct: 1197 VCDKANDC-GDNSDEKNCDGSKRNFIESNECDEFKCSVG-TCLPYSKVCDGNRDC 1249
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 120/313 (38%), Gaps = 75/313 (23%)
Query: 105 DERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVE--SVRVDGS--H 160
D R+ ++G+ + + N+ W S Q+ LY + +V+ +V D S +
Sbjct: 804 DTRILRSGLKSPHSLTVAGDNLFWIES------QNKLYSTNFRTASVKQKTVEFDLSKLN 857
Query: 161 NAVLCHPNELRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI 218
+ + P L S + V L K K DC C+ C P + + C
Sbjct: 858 DNMTSLPGHLTPYSRDAQYVVTLRKDDIPKHDCQKNNGN---CSHVCLPSLITSFICACP 914
Query: 219 PESWKCDGFVDCLEDGSDEPNTCI--HQCFNGQVQCALSKKCIPHNWLCDEEMDC----- 271
P + S++ TCI H+C + +C+ CI N LCD +C
Sbjct: 915 PGM-----------ELSNDNRTCISHHECSKNEYKCSEHNICIQRNQLCDGIENCPNGED 963
Query: 272 -------------------------------STDDIVDNTDEDWDKFHQCFNGQVQCALS 300
S D D +DE + +C + + QC +
Sbjct: 964 ETSECRIKGRCKENQFMCKNGDCIRLKDRCNSRYDCTDQSDEQNCEKPKCKSDEFQCKFT 1023
Query: 301 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFC 360
+ CIP +CD DC DD+ D +ED K V C NE +C ++ +C+ + C
Sbjct: 1024 ETCIPKTKMCDSNPDC--DDLSD--EEDCRK------VECTSNEFKC-NNGKCIPNTFVC 1072
Query: 361 DGKPDCSNGEDEG 373
D DC +GEDE
Sbjct: 1073 DNDNDCEDGEDEA 1085
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 14/119 (11%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMGKCIPE 220
+ C ++ +C + +C+ +K+CD DC + DE C + CT +F C G CI +
Sbjct: 80 ITCAKDQFKC-KNQECIPAAKYCDMVNDCLDESDEHDGCVKHLNCT-NKFLCTDGHCINK 137
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCF--------NGQVQCALSKKCIPHNWLCDEEMDC 271
W CDG DC DG+DE N ++ N Q CA + +CI +CD++ DC
Sbjct: 138 EWVCDGRNDC-PDGNDEWNCKANKTSSASSCKTENYQYMCA-NHRCISLKVVCDKKDDC 194
Score = 39.7 bits (91), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE 383
C NE +C N C+ ++ CDG +C NGEDE C K C+
Sbjct: 932 CSKNEYKCSEHNICIQRNQLCDGIENCPNGEDETSECRIKGRCK 975
Score = 36.2 bits (82), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 10/101 (9%)
Query: 87 INDLLNSWDLPAPEIFPLDE---RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYW 143
I D +N W A D ++ + M G + ++ ++ + + ID+ + LYW
Sbjct: 1465 IVDSINRWLFWAEISLEADHPTSKICRTDMTGADMK-IIASDLGFVRGMTIDHVKSKLYW 1523
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKF 184
D TVES DGS V+ N N +++S F
Sbjct: 1524 SDDFYKTVESSNFDGSQRKVVLTLN------MNHALSISIF 1558
Score = 35.4 bits (80), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 6/44 (13%)
Query: 174 SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKC 217
++++C++L CD K DC +G DEGP C QF+C C
Sbjct: 177 ANHRCISLKVVCDKKDDCGDGSDEGPGCT------QFNCSSAGC 214
>sp|Q8VI56|LRP4_MOUSE Low-density lipoprotein receptor-related protein 4 OS=Mus musculus
GN=Lrp4 PE=1 SV=3
Length = 1905
Score = 119 bits (298), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 109/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINSGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGINDCGDSSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTNT ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNTEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM +R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASSRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 94 WDLPAPEIFPLD---ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT 150
WD ++ D + + +A G + +V +++ P+ L ID+ + LYW D+ +
Sbjct: 780 WDSRDDHVYWTDVSTDTISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDR 839
Query: 151 VESVRVDGSHNAVLCHPN 168
+E DGS VL N
Sbjct: 840 IEVANTDGSMRTVLIWEN 857
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 15/118 (12%)
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP-----APEIFPLD----------ERLEK 110
N L F ++ +V V L D++ ++ A + PL+ R+ +
Sbjct: 1048 NSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISR 1107
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A + G ++T +Q L +D +YW D+ N +E +DGS VL N
Sbjct: 1108 ASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQN 1165
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 46 KYFKRILNGTHTLALEFNHRNQSLCF--IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+Y + N + +AL+F+HR + + + + + L + + +++++ L +P
Sbjct: 459 EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLA 517
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D R+E A + G +R L+ ++++ P ++ + + +YW D +
Sbjct: 518 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 577
Query: 150 TVESVRVDGSHNAVLC 165
+E+ +DGS ++
Sbjct: 578 RIEASSMDGSGRRIIA 593
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVLC 165
R+E + G R LV +N+ P ++V+ + +YW D N +E +DGS VL
Sbjct: 1147 RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLI 1206
Query: 166 HPN 168
+ N
Sbjct: 1207 NNN 1209
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAG 405
P NK N CSH C P P G C CP G
Sbjct: 1307 PLGFNKCGSRNGGCSHLCLPRPSGFSCACPTG 1338
>sp|Q98931|LRP8_CHICK Low-density lipoprotein receptor-related protein 8 OS=Gallus gallus
GN=LRP8 PE=1 SV=1
Length = 917
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 149/335 (44%), Gaps = 34/335 (10%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG 215
+D + A C P+E +C S+ C++++ CDG +C +G DE C+P +F C
Sbjct: 140 IDEAGCAPACSPDEFQC-SNKTCISINFVCDGYNNCGDGSDEKKCSPLTCSPNEFQCNNS 198
Query: 216 KCIPESWKCDGFVDCLEDGSDEP-------NTCIHQCFNGQVQCALSKKCIPHNWLCDEE 268
CIP+ W CD DC ED SDE + C + QC + +CI NW CD +
Sbjct: 199 VCIPQLWVCDNQADC-EDHSDESIERCGYDAKAFNTCAAHEFQCG-NGECILLNWKCDGD 256
Query: 269 MDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
DC D +DE C + QC CI CD+ DC DN+DE
Sbjct: 257 EDCK-----DKSDEQDCPLVTCRPDEFQCG-DGTCIHGAKQCDKVHDCP-----DNSDE- 304
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN---NKADCENL 385
+ P++ +C S +C+ K CD DC + DE P N+ N
Sbjct: 305 --AGCVQESACESPSKFQC-KSGECIDGGKVCDLHRDCRDWSDE-PLKECGINECSLNNG 360
Query: 386 KCSHKCSPTPRGAMCFCPAGQN-PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444
CSH C G C CP G +K C D DEC +C Q C N Y C C EGY
Sbjct: 361 GCSHICKDLKIGYECECPPGYKLLDKKTCGDIDECENPDACSQICINYKGDYKCECYEGY 420
Query: 445 TLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
+ K+C AV + +IF++ ++R+I L
Sbjct: 421 EMDTLSKNCKAVG----KSPYLIFTNRHEVRKIDL 451
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 148/375 (39%), Gaps = 92/375 (24%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ +C + +C+ CD DCS+ DE C F+C G CIP+ WKC
Sbjct: 29 CDKDQFQC-RNERCIPAVWACDEDNDCSDNSDEADCPKKTCAETDFACDNGHCIPDRWKC 87
Query: 225 DGFVDCLEDGSDEPN-TCIHQ-CFNGQVQCA-LSKKCIPHNWLCDEEMDCST-------- 273
DG +C DGSDE C Q C ++ C LS KCIP +W CD + DC +
Sbjct: 88 DGEEEC-SDGSDESEAACTKQVCPAEKISCGDLSNKCIPSSWRCDGQKDCESGIDEAGCA 146
Query: 274 -------------------------DDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308
++ D +DE C + QC S CIP W
Sbjct: 147 PACSPDEFQCSNKTCISINFVCDGYNNCGDGSDEKKCSPLTCSPNEFQCNNS-VCIPQLW 205
Query: 309 LCDEEMDCSTDDIVDNTDEDWDK--YFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC D++DE ++ Y + C +E +CG+ +C+ L+ CDG DC
Sbjct: 206 VCDNQADCE-----DHSDESIERCGYDAKAFNTCAAHEFQCGNG-ECILLNWKCDGDEDC 259
Query: 367 SNGEDEG--PFCNNKAD---CENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE P + D C + C H C A C + ++P+K
Sbjct: 260 KDKSDEQDCPLVTCRPDEFQCGDGTCIHGAKQCDKVHDCPDNSDEAGCVQESACESPSKF 319
Query: 412 QCVDAD-----------------------ECLI------DGSCDQTCTNTHLSYVCSCTE 442
QC + EC I +G C C + + Y C C
Sbjct: 320 QCKSGECIDGGKVCDLHRDCRDWSDEPLKECGINECSLNNGGCSHICKDLKIGYECECPP 379
Query: 443 GYTLRPDGKSCTAVN 457
GY L D K+C ++
Sbjct: 380 GYKLL-DKKTCGDID 393
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 82/176 (46%), Gaps = 18/176 (10%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKK 257
G EC QF C +CIP W CD DC D SDE + C C +
Sbjct: 22 GKGAMKECDKDQFQCRNERCIPAVWACDEDNDC-SDNSDEADCPKKTCAETDFACD-NGH 79
Query: 258 CIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC 316
CIP W CD E +CS D D ++ K C ++ C LS KCIP +W CD + DC
Sbjct: 80 CIPDRWKCDGEEECS--DGSDESEAACTK-QVCPAEKISCGDLSNKCIPSSWRCDGQKDC 136
Query: 317 STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ DE + A C P+E +C S+ C++++ CDG +C +G DE
Sbjct: 137 ES-----GIDE------AGCAPACSPDEFQC-SNKTCISINFVCDGYNNCGDGSDE 180
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLD------ 105
LN +A+++ H+N + +S ++ + NS DL P +D
Sbjct: 510 LNSPEGVAIDWVHKNIYWTDSGNKTISVATADGSRRRTVFNS-DLSEPRAIAVDPTRRFM 568
Query: 106 --------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157
++EKAG++G R LV+ NI+WP+ + +D LYW DS L+++ + +
Sbjct: 569 YWSDWGDKAKIEKAGLNGVGRQVLVSDNIEWPNGITLDLLNQRLYWVDSKLHSLSCIDFN 628
Query: 158 GSHNAVL 164
GS+ VL
Sbjct: 629 GSNREVL 635
>sp|Q9QYP1|LRP4_RAT Low-density lipoprotein receptor-related protein 4 OS=Rattus
norvegicus GN=Lrp4 PE=1 SV=2
Length = 1905
Score = 116 bits (291), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEESCPSAVPSPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S C+ W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCVNAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCR-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCASDQFLCWN-GRCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQN--PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCTLPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM NR +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASNRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 52 LNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-APEIFPLD- 105
L T LA+++ RN + + + RL R IN NS D P A +FP
Sbjct: 1427 LKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAIAVFPRKG 1483
Query: 106 ----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR 155
++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL+ +ES
Sbjct: 1484 YLFWTDWGHIAKIERANLDGSERKVLINADLGWPNGLTLDYDTRRIYWVDAHLDRIESAD 1543
Query: 156 VDGSHNAVLC----HPNEL 170
++G VL HP L
Sbjct: 1544 LNGKLRQVLVSHVSHPFAL 1562
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E ++G++ L
Sbjct: 1191 KLERSGMDGSDRTVLINNNLGWPNGLTVDKTSSQLLWADAHTERIEVADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVL 548
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGHGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQKVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 15/118 (12%)
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLNSWDLP-----APEIFPLD----------ERLEK 110
N L F ++ +V V L D++ ++ A + PL+ R+ +
Sbjct: 1048 NSFLIFARRIDVRMVSLDIPYFADVVVPINMTMKNTIAIGVDPLEGKVYWSDSTLHRISR 1107
Query: 111 AGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPN 168
A + G ++T +Q L +D +YW D+ N +E +DGS VL N
Sbjct: 1108 ASLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVWQN 1165
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/136 (18%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 46 KYFKRILNGTHTLALEFNHRNQSLCF--IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+Y + N + +AL+F+HR + + + + + L + + +++++ L +P
Sbjct: 459 EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLA 517
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D R+E A + G +R L+ ++++ P ++ + + +YW D +
Sbjct: 518 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTP 577
Query: 150 TVESVRVDGSHNAVLC 165
+E+ +DGS ++
Sbjct: 578 RIEASSMDGSGRRIIA 593
Score = 37.4 bits (85), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVLC 165
R+E + G R LV +N+ P ++V+ + +YW D N +E +DGS VL
Sbjct: 1147 RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRTVLI 1206
Query: 166 HPN 168
+ N
Sbjct: 1207 NNN 1209
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLN 480
+G C C + C+C G L+ DGK+C P E ++FSS IRRI L+
Sbjct: 1317 NGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCD----PSPE-TYLLFSSRGSIRRISLD 1370
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVL 164
+R+E A G R+ L+ +N+ P +V++ +YW D + +E +D S+ V+
Sbjct: 838 DRIEVANTDGSMRTVLIWENLDRPRDIVVEPMGGYMYWTDWGASPKIERAGMDASNRQVI 897
Query: 165 CHPN 168
N
Sbjct: 898 ISSN 901
Score = 32.7 bits (73), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 15/32 (46%)
Query: 374 PFCNNKADCENLKCSHKCSPTPRGAMCFCPAG 405
P NK N CSH C P P G C CP G
Sbjct: 1307 PLGFNKCGSRNGGCSHLCLPRPSGFSCACPTG 1338
>sp|O75096|LRP4_HUMAN Low-density lipoprotein receptor-related protein 4 OS=Homo sapiens
GN=LRP4 PE=1 SV=4
Length = 1905
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 108/331 (32%), Positives = 154/331 (46%), Gaps = 43/331 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE--------GPFCNAECTPGQFSCGMGK 216
C E RC S C+A +CDG DC +G DE P CN E +F C G+
Sbjct: 148 CSDKEFRC-SDGSCIAEHWYCDGDTDCKDGSDEENCPSAVPAPPCNLE----EFQCAYGR 202
Query: 217 CIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275
CI + + CD D D SDE + HQ C +G+ C S CI W CD + DC
Sbjct: 203 CILDIYHCD-GDDDCGDWSDESDCSSHQPCRSGEFMCD-SGLCINAGWRCDGDADCD--- 257
Query: 276 IVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
D +DE C Q +C S +C+ +W CD E DC+ DN+DE+ +
Sbjct: 258 --DQSDERNCTTSMCTAEQFRCH-SGRCVRLSWRCDGEDDCA-----DNSDEE--NCENT 307
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKA-------DCENLKCS 388
+ C ++ C + +C+ K C+G DC + DE P N + + N C+
Sbjct: 308 GSPQCALDQFLCWNG-RCIGQRKLCNGVNDCGDNSDESPQQNCRPRTGEENCNVNNGGCA 366
Query: 389 HKCSPTPRGAMCFCPAGQNPNKT--QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTL 446
KC C C G + C D +EC +G C Q CTN+ ++ C C GY L
Sbjct: 367 QKCQMVRGAVQCTCHTGYRLTEDGHTCQDVNECAEEGYCSQGCTNSEGAFQCWCETGYEL 426
Query: 447 RPDGKSCTAVNVPQDEPASIIFSSTVDIRRI 477
RPD +SC A+ EP ++F++ +DIR++
Sbjct: 427 RPDRRSCKALG---PEPV-LLFANRIDIRQV 453
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+ CDG DC + DE C+P F C GKCI SW CDG DC ED SDE
Sbjct: 44 CIPAQWQCDGDNDCGDHSDEDGCILPTCSPLDFHCDNGKCIRRSWVCDGDNDC-EDDSDE 102
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ +C + C + CI W CD + DC DN+DE D +C + + +C
Sbjct: 103 QDCPPRECEEDEFPCQ-NGYCIRSLWHCDGDNDCG-----DNSDEQCD-MRKCSDKEFRC 155
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
+ CI +W CD + DC D +DE+
Sbjct: 156 S-DGSCIAEHWYCDGDTDCK-----DGSDEE 180
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 23/146 (15%)
Query: 45 DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL----RCAQINDLLNSWDLP-AP 99
+ R L T LA+++ RN + + + RL R IN NS D P A
Sbjct: 1420 ETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVLIN---NSLDEPRAI 1476
Query: 100 EIFPLD-----------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHL 148
+FP ++E+A + G R L+ ++ WP+ L +DY+ +YW D+HL
Sbjct: 1477 AVFPRKGYLFWTDWGHIAKIERANLDGSERKVLINTDLGWPNGLTLDYDTRRIYWVDAHL 1536
Query: 149 NTVESVRVDGSHNAVLC----HPNEL 170
+ +ES ++G VL HP L
Sbjct: 1537 DRIESADLNGKLRQVLVSHVSHPFAL 1562
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++E+AGM R +++ N+ WP+ L IDY LYW D+ + T+E +DGS VL
Sbjct: 883 KIERAGMDASGRQVIISSNLTWPNGLAIDYGSQRLYWADAGMKTIEFAGLDGSKRKVL 940
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
+LE++GM G +R+ L+ N+ WP+ L +D L W D+H +E+ ++G++ L
Sbjct: 1191 KLERSGMDGSDRAVLINNNLGWPNGLTVDKASSQLLWADAHTERIEAADLNGANRHTLVS 1250
Query: 167 P 167
P
Sbjct: 1251 P 1251
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
+R+ +A ++G N +V+ ++ P L +D+ D LYW DS + +E +DG+H VL
Sbjct: 490 DRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL 549
Query: 166 HPN 168
N
Sbjct: 550 WQN 552
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
R+E + M G R + ++ WP+ L IDY +YW D+ + +E +DGSH +
Sbjct: 578 RIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAV 635
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
+ +A ++G N ++ + ++ L +D+ LYW D+ NT+E+ R+DGS VL
Sbjct: 1409 IRRADLNGSNMETVIGRGLKTTDGLAVDWVARNLYWTDTGRNTIEASRLDGSCRKVL 1465
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 46 KYFKRILNGTHTLALEFNHRNQSLCF--IQQQNVSSVRLRCAQINDLLNSWDLPAPEIFP 103
+Y + N + +AL+F+HR + + + + + L + + +++++ L +P
Sbjct: 459 EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLA 517
Query: 104 LD-------------ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLN 149
+D R+E A + G +R L+ +N++ P ++ + + +YW D +
Sbjct: 518 VDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQNLEKPRAIALHPMEGTIYWTDWGNTP 577
Query: 150 TVESVRVDGSHNAVLC 165
+E+ +DGS ++
Sbjct: 578 RIEASSMDGSGRRIIA 593
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A G + +V +++ P+ L ID+ + LYW D+ + +E DGS VL
Sbjct: 797 ISRAKWDGTGQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTDRIEVANTDGSMRTVLIWE 856
Query: 168 N 168
N
Sbjct: 857 N 857
Score = 38.9 bits (89), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNT-VESVRVDGSHNAVLC 165
R+E + G R LV +N+ P ++V+ + +YW D N +E +DGS AVL
Sbjct: 1147 RIEVGNLDGSMRKVLVWQNLDSPRAIVLYHEMGFMYWTDWGENAKLERSGMDGSDRAVLI 1206
Query: 166 HPN 168
+ N
Sbjct: 1207 NNN 1209
Score = 38.9 bits (89), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCH 166
R+ +A + G ++T +Q L +D +YW D+ N +E +DGS VL
Sbjct: 1104 RISRANLDGSQHEDIITTGLQTTDGLAVDAIGRKVYWTDTGTNRIEVGNLDGSMRKVLVW 1163
Query: 167 PN 168
N
Sbjct: 1164 QN 1165
Score = 35.4 bits (80), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481
+G C C + C+C G L+ DGK+C P E ++FSS IRRI L+
Sbjct: 1317 NGGCSHLCLPRPSGFSCACPTGIQLKGDGKTCD----PSPE-TYLLFSSRGSIRRISLDT 1371
Query: 482 S 482
S
Sbjct: 1372 S 1372
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 55/151 (36%), Gaps = 30/151 (19%)
Query: 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQN 407
G+ + + + G D + P NK N CSH C P P G C CP G
Sbjct: 1281 GTGSNVILVRSNLPGLMDMQAVDRAQPLGFNKCGSRNGGCSHLCLPRPSGFSCACPTGIQ 1340
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRP--DGKSCTAVNVPQDEPAS 465
DG +TC + +Y+ + G R D T V+VP E +
Sbjct: 1341 LKG-----------DG---KTCDPSPETYLLFSSRGSIRRISLDTSDHTDVHVPVPELNN 1386
Query: 466 IIF--SSTVD------------IRRIHLNGS 482
+I +VD IRR LNGS
Sbjct: 1387 VISLDYDSVDGKVYYTDVFLDVIRRADLNGS 1417
>sp|Q99087|LDLR1_XENLA Low-density lipoprotein receptor 1 OS=Xenopus laevis GN=ldlr-a PE=2
SV=1
Length = 909
Score = 115 bits (288), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 154/371 (41%), Gaps = 72/371 (19%)
Query: 163 VLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
V C ++ CG N+C+ +S CDG+ DC NG DE + C QF+C GKCI
Sbjct: 66 VTCGTDQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTHKVCADDQFTCRSGKCISLD 125
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD 281
+ CD +DC +DGSDE C QC CIP W CD + DC D +D
Sbjct: 126 FVCDEDLDC-DDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE-----DGSD 179
Query: 282 EDWDKFHQCFNGQVQCAL------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSH 335
E+ + + C+ S +CI +W CD DC D +DE
Sbjct: 180 EEHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGFDCK-----DKSDEK-----DC 229
Query: 336 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGED----------EGP----------- 374
C P++ +C ++ C+ S+ CD + DC + D EGP
Sbjct: 230 VKPTCRPDQFQC-NTGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECI 288
Query: 375 ----FCNNKADCE------------------NLKCSHKCSPTPRGAMCFCPAGQN-PNKT 411
CN K DC N CSH C+ G C C G ++
Sbjct: 289 TMDKVCNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLVDQK 348
Query: 412 QCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSST 471
+C D +EC +C Q C N Y C C EGY + P SC ++ A + F++
Sbjct: 349 RCEDINECENPNTCSQICINLVGGYKCECREGYQMDPVTASCKSIGT----VAYLFFTNR 404
Query: 472 VDIRRIHLNGS 482
++R++ L+ S
Sbjct: 405 HEVRKMTLDRS 415
Score = 111 bits (278), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/362 (31%), Positives = 151/362 (41%), Gaps = 75/362 (20%)
Query: 147 HLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECT 206
H++ + +R C NE +CG +C+ CDG +C + DE P E T
Sbjct: 17 HVSAISGIRK--------CDRNEFQCGDG-KCIPYKWICDGSAECKDSSDESPETCREVT 67
Query: 207 PG--QFSCG--MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPH 261
G QFSCG + +CIP SWKCDG DC E+GSDE N C H+ C + Q C S KCI
Sbjct: 68 CGTDQFSCGGRLNRCIPMSWKCDGQTDC-ENGSDE-NDCTHKVCADDQFTCR-SGKCISL 124
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+++CDE++DC D +DE + C QC CIP W CD + DC
Sbjct: 125 DFVCDEDLDCD-----DGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCE---- 175
Query: 322 VDNTDEDW--DKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE------- 372
D +DE+ + C P E CG S +C+ +S CDG DC + DE
Sbjct: 176 -DGSDEEHCEGREPIKTDKPCSPLEFHCG-SGECIHMSWKCDGGFDCKDKSDEKDCVKPT 233
Query: 373 ----------------GPFCNNKADCENLKCSHKCSPTP----------RGAMCFCPAGQ 406
C+ + DC++L C R C
Sbjct: 234 CRPDQFQCNTGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKV 293
Query: 407 NPNKTQCVD----------ADECLI-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455
K C D +ECL +G C C + + Y C C EGY L D K C
Sbjct: 294 CNKKRDCRDWSDEPLKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV-DQKRCED 352
Query: 456 VN 457
+N
Sbjct: 353 IN 354
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT+NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTENIEWPNGITLDLINQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ V G + +
Sbjct: 586 IDVTGENRRTV 596
Score = 32.3 bits (72), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 95 DLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV 154
DL +I+ +EKA + + +++ IQ P + +D+ +YW DS +T+
Sbjct: 443 DLTQRKIY--SASMEKADNTSHHET-VISNQIQAPDGIAVDWIHGNIYWTDSKFSTISVA 499
Query: 155 RVDGS 159
+GS
Sbjct: 500 NTEGS 504
>sp|P35950|LDLR_CRIGR Low-density lipoprotein receptor OS=Cricetulus griseus GN=LDLR PE=3
SV=2
Length = 862
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/375 (29%), Positives = 153/375 (40%), Gaps = 75/375 (20%)
Query: 162 AVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPE 220
+V C E CG ++C+ S CDG+ DC NG DE C+ +F C GKCI +
Sbjct: 65 SVTCQSKEFSCGGRVSRCIPNSWRCDGQTDCENGSDEQGCAPKTCSQDEFRCQDGKCISQ 124
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL-------------------------- 254
+ CD DC+ DGSDE + C +C
Sbjct: 125 KFVCDQDQDCV-DGSDEAHCQAATCGPAHFRCNSSACIPSLWACDGDDDCEDGSDEWPQN 183
Query: 255 -----------------------SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF 291
S +CI +W+CD DC D +DE+ C
Sbjct: 184 CGGRDTAAAWSSSPCSSLEFHCGSSECIHRSWVCDGSADCK-----DKSDEEHCVTATCR 238
Query: 292 NGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSS 350
+ QCA CI + CD E DC D +DE N C PN+ +C S
Sbjct: 239 PDEFQCA-DGTCIHGSRQCDREYDCK-----DMSDE----LGCINVTQCDGPNKFKC-HS 287
Query: 351 NQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAG-QN 407
+C+AL K CD DC + DE +C N CSH C G C CP G Q
Sbjct: 288 GECIALDKVCDSMRDCRDWSDEPIKDCRTNECLDNNGGCSHVCKDLKIGYECLCPNGFQL 347
Query: 408 PNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASII 467
++ +C D DEC +CDQ C N SY C C G+ + P + C AV A ++
Sbjct: 348 VDQHRCEDIDECQEPDTCDQLCVNLEGSYKCECRAGFHMDPHTRVCKAVG----SVAYLL 403
Query: 468 FSSTVDIRRIHLNGS 482
F++ ++R++ L+ S
Sbjct: 404 FTNRHEVRKMTLDRS 418
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE RC +C+A CDG P+C +G DE + C +FSCG + +CIP
Sbjct: 27 CDRNEFRC-RDGKCIASKWVCDGSPECPDGSDESSETCMSVTCQSKEFSCGGRVSRCIPN 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE C + +C KCI ++CD++ DC VD +
Sbjct: 86 SWRCDGQTDC-ENGSDEQGCAPKTCSQDEFRCQ-DGKCISQKFVCDQDQDC-----VDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTD-EDWDKYFSHNAVL 339
DE + C +C S CIP W CD + DC + D + ++
Sbjct: 139 DEAHCQAATCGPAHFRCN-SSACIPSLWACDGDDDCEDGSDEWPQNCGGRDTAAAWSSSP 197
Query: 340 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C E CGSS +C+ S CDG DC + DE
Sbjct: 198 CSSLEFHCGSS-ECIHRSWVCDGSADCKDKSDE 229
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 29/169 (17%)
Query: 21 HNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFNHRNQSLC 70
++ L D+ S D I+ D DW + Y+ + G+ ++A R ++L
Sbjct: 453 YSALMDQAPTLSYDTIISGDLQAPDGLAVDWIHGNIYWTDSVPGSVSVADTKGIRRRTL- 511
Query: 71 FIQQQNVSSVRLRCAQINDLL--NSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQW 128
Q++ + ++ + W PA +++K G++G + LVT++IQW
Sbjct: 512 -FQEKGSRPRDIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVTEDIQW 562
Query: 129 PSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
P+ + +D LYW DS L+++ S+ V+G + L HP L
Sbjct: 563 PNGITLDIPSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKQLAHPFSL 611
>sp|P35952|LDLR_RAT Low-density lipoprotein receptor OS=Rattus norvegicus GN=Ldlr PE=2
SV=1
Length = 879
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 162/415 (39%), Gaps = 120/415 (28%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCG--MGKCIPE 220
C NE +C +C+ CDG +C +G DE P + C G+FSCG + +CIP+
Sbjct: 27 CGKNEFQC-RDGKCIVSKWVCDGSRECPDGSDESPETCMSVTCRSGEFSCGGRVSRCIPD 85
Query: 221 SWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
SW+CDG DC E+GSDE + C + +C KCI ++CD++ DC +D +
Sbjct: 86 SWRCDGRTDC-ENGSDELDCSPKTCSLDEFRCQ-DGKCISRQFVCDQDWDC-----LDGS 138
Query: 281 DEDWDKFHQCFNGQVQCALS---------------------------------------- 300
DE C +C S
Sbjct: 139 DEAHCAATTCGPAHFRCNSSSCIPSLWACDGDRDCDDGSDEWPQNCGAEDTAAEVVSSPC 198
Query: 301 ---------KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSN 351
+CI +W+CD DC D +DE+ + C P+E +C +
Sbjct: 199 SSLEFHCGSSECIHRSWVCDGAADCK-----DKSDEE-----NCAVTTCRPDEFQC-ADG 247
Query: 352 QCVALSKFCDGKPDCSNGEDE----------GP---------------FCNNKADCE--- 383
C+ S+ CD + DC + DE GP CN+ DC
Sbjct: 248 SCIHGSRQCDREHDCKDMSDELGCINVTQCDGPNKFKCHSGECISLDKVCNSARDCRDWS 307
Query: 384 ---------------NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQ 427
N CSH C G C CP+G + + QC D DEC +C Q
Sbjct: 308 DEPIKECKTNECLDNNGGCSHICKDLKIGYECLCPSGFRLVDGHQCEDIDECQEPDTCSQ 367
Query: 428 TCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNGS 482
C N S+ C C G+ + P + C AV ++F++ ++R++ L+ S
Sbjct: 368 LCVNLEGSFKCECRAGFHMDPHTRVCKAVG----SIGFLLFTNRHEVRKMTLDRS 418
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 14 LSKKCIPHNWLCDEEMDCSTDDIV-------DNTDEDW---DKYFKRILNGTHTLALEFN 63
LS++ I ++ + D+ S D I+ D DW + Y+ + GT ++A
Sbjct: 447 LSQRKI-YSAVMDQGTSLSYDAIISGDLHAPDGLAVDWIHGNIYWTDSVPGTVSVADTKG 505
Query: 64 HRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
R ++L + ++ + W PA +++K G++G + LVT
Sbjct: 506 VRRRTLFREKGSRPRAIVVDPVHGFMYWTDWGTPA--------KIKKGGLNGVDIYSLVT 557
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV-------LCHPNEL 170
++IQWP+ + +D LYW DS L+++ S+ V+G L HP L
Sbjct: 558 EDIQWPNGITLDLPSGRLYWVDSKLHSISSIDVNGGGRKTILEDEKQLAHPFSL 611
>sp|Q99088|LDLR2_XENLA Low-density lipoprotein receptor 2 OS=Xenopus laevis GN=ldlr-b PE=2
SV=1
Length = 892
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/374 (29%), Positives = 153/374 (40%), Gaps = 74/374 (19%)
Query: 161 NAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCI- 218
A+ C ++ CG N+C+ +S CDG+ DC NG DE C QF+C GKCI
Sbjct: 64 RALTCGADQFSCGGRLNRCIPMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCIS 123
Query: 219 ---------------------------------------PESWKCDGFVDCLEDGSDE-- 237
P+ W CDG DC EDGSDE
Sbjct: 124 LDFVCDQDQDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDRDC-EDGSDEDH 182
Query: 238 -----PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFN 292
P C + C S +CI +W CD DC + D+D K C
Sbjct: 183 CEGREPIKTDKPCAPLEFHCG-SGECIHMSWKCDAGYDCKHK----SDDKDCVK-PTCRP 236
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCH-PNELRCGSSN 351
Q QC CI + CD E DC D +DE+ N C P+ +C S
Sbjct: 237 DQFQCN-DGTCIHGSRQCDREYDCK-----DLSDEEG----CVNVTKCQGPDVFKC-RSG 285
Query: 352 QCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKCSHKCSPTPRGAMCFCPAGQN-P 408
+C+ + K C K DC + DE + +C N CSH C+ G C C G
Sbjct: 286 ECITMDKVCHKKRDCRDWTDEPIKECGENECLRNNGGCSHICNDLKIGYECLCNEGYRLV 345
Query: 409 NKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
++ +C D +EC +C Q C N H Y C C EGY + P SC ++ A + F
Sbjct: 346 DQKRCEDINECENPNTCTQICINLHGGYKCECREGYQMDPVTASCKSIGT----VAYLFF 401
Query: 469 SSTVDIRRIHLNGS 482
++ ++R++ L+ S
Sbjct: 402 TNRHEVRKMTLDRS 415
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 119/338 (35%), Gaps = 91/338 (26%)
Query: 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN-TC-IHQCFNGQVQCALS-KKCI 259
+C +F CG GKCIP W CDG +C +DGSDE + TC C Q C +CI
Sbjct: 25 GKCDRNEFQCGDGKCIPYKWICDGSAEC-KDGSDESSETCRALTCGADQFSCGGRLNRCI 83
Query: 260 PHNWLCDEEMDCSTD--------------------------DIV--------DNTDEDWD 285
P +W CD + DC D V D +DE +
Sbjct: 84 PMSWKCDGQTDCENGSDENDCTRKVCADDQFTCRSGKCISLDFVCDQDQDCDDGSDESYC 143
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFSHNAVLCHPN 343
C QC CIP W CD + DC D +DED + C P
Sbjct: 144 PAPTCNPAMFQCKDKGICIPKLWACDGDRDCE-----DGSDEDHCEGREPIKTDKPCAPL 198
Query: 344 ELRCGSSNQCVALSKFCDGKPDCSNGEDE-----------------------GPFCNNKA 380
E CG S +C+ +S CD DC + D+ C+ +
Sbjct: 199 EFHCG-SGECIHMSWKCDAGYDCKHKSDDKDCVKPTCRPDQFQCNDGTCIHGSRQCDREY 257
Query: 381 DCENLKCSHKCSPTP----------RGAMCFCPAGQNPNKTQCVD----------ADECL 420
DC++L C R C K C D +ECL
Sbjct: 258 DCKDLSDEEGCVNVTKCQGPDVFKCRSGECITMDKVCHKKRDCRDWTDEPIKECGENECL 317
Query: 421 I-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457
+G C C + + Y C C EGY L D K C +N
Sbjct: 318 RNNGGCSHICNDLKIGYECLCNEGYRL-VDQKRCEDIN 354
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 94 WDLPAPEIFPLDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVES 153
W LPA ++EK G++G +R PLVT NI+WP+ + +D LYW DS L+++
Sbjct: 534 WGLPA--------KIEKGGLNGVDRYPLVTDNIEWPNGITLDLISQRLYWVDSKLHSLSC 585
Query: 154 VRVDGSHNAVL 164
+ + G + +
Sbjct: 586 IDITGENRRTV 596
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Query: 65 RNQSLCFIQQ-QNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVT 123
R++ FI + +NV ++ + A N + S DL +I+ H E +++
Sbjct: 414 RSEYTSFIPRLKNVVALDMEIAS-NKIYWS-DLTQRKIYSASMDKADNTSHHET---VIS 468
Query: 124 KNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
IQ P + +D+ +YW DS +T+ +GS L
Sbjct: 469 NQIQAPDGIAVDWIHGNIYWTDSKFSTISVANTEGSKRKTL 509
>sp|Q14114|LRP8_HUMAN Low-density lipoprotein receptor-related protein 8 OS=Homo sapiens
GN=LRP8 PE=1 SV=4
Length = 963
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 142/337 (42%), Gaps = 46/337 (13%)
Query: 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
+C +L CG +S++CV S CDG+ DC G DE C C P +F CG C+ +
Sbjct: 126 VCPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEA-GCATLCAPHEFQCGNRSCLAAVF 184
Query: 223 ----KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL--SKKCIPHNWLCDEEMDCSTDDI 276
D E G +P C + +C CIP W+CD + DC
Sbjct: 185 VCDGDDDCGDGSDERGCADP-----ACGPREFRCGGDGGGACIPERWVCDRQFDCE---- 235
Query: 277 VDNTDEDWDKFHQCFNGQVQ----CAL-------SKKCIPHNWLCDEEMDCSTDDIVDNT 325
D +DE + + G CA S +C+ W CD + DC D +
Sbjct: 236 -DRSDEAAELCGRPGPGATSAPAACATASQFACRSGECVHLGWRCDGDRDCK-----DKS 289
Query: 326 DEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--E 383
DE C +E +CG CV K C+ + DC +G DE +C
Sbjct: 290 DE-----ADCPLGTCRGDEFQCGDGT-CVLAIKHCNQEQDCPDGSDEAGCLQGLNECLHN 343
Query: 384 NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTE 442
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N + C C
Sbjct: 344 NGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECKDPDACSQICVNYKGYFKCECYP 403
Query: 443 GYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
GY + K+C A + S+IF++ ++RRI L
Sbjct: 404 GYEMDLLTKNCKAA---AGKSPSLIFTNRHEVRRIDL 437
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 70/154 (45%), Gaps = 17/154 (11%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
+C QF C +CIP W+CD DCL D SDE + C + C + CI W
Sbjct: 46 DCEKDQFQCRNERCIPSVWRCDEDDDCL-DHSDEDDCPKKTCADSDFTCD-NGHCIHERW 103
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA-LSKKCIPHNWLCDEEMDCSTDDIV 322
CD E +C D D ++ K C ++ C S KC+P +W CD E DC
Sbjct: 104 KCDGEEECP--DGSDESEATCTK-QVCPAEKLSCGPTSHKCVPASWRCDGEKDCE----- 155
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVAL 356
DE + A LC P+E +CG+ + A+
Sbjct: 156 GGADE------AGCATLCAPHEFQCGNRSCLAAV 183
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVL 164
++EK+G++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ G + L
Sbjct: 564 KIEKSGLNGVDRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFSGGNRKTL 621
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 51/110 (46%), Gaps = 17/110 (15%)
Query: 290 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGS 349
C Q QC +++CIP W CDE+ DC +D++DED C ++ C
Sbjct: 47 CEKDQFQCR-NERCIPSVWRCDEDDDC-----LDHSDED-----DCPKKTCADSDFTC-D 94
Query: 350 SNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC--ENLKC---SHKCSPT 394
+ C+ CDG+ +C +G DE K C E L C SHKC P
Sbjct: 95 NGHCIHERWKCDGEEECPDGSDESEATCTKQVCPAEKLSCGPTSHKCVPA 144
>sp|Q924X6|LRP8_MOUSE Low-density lipoprotein receptor-related protein 8 OS=Mus musculus
GN=Lrp8 PE=1 SV=2
Length = 996
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 112/402 (27%), Positives = 152/402 (37%), Gaps = 119/402 (29%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGPFC--NAECTPGQFSCGMG--KCIPESWKCDGFVDCL 231
C+ CDG+ +C +G DE + EC + SCG KC+P SW+CDG DC
Sbjct: 90 GHCIPERWKCDGEEECPDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDC- 148
Query: 232 EDGSDE---PNTCI---HQCFNG--------------------------------QVQCA 253
E G+DE P C QC N + +C
Sbjct: 149 EGGADEAGCPTLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCG 208
Query: 254 LSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNG------------QVQCALSK 301
CIP W+CD + DC D +DE + + G Q C S
Sbjct: 209 GGGTCIPERWVCDRQFDCE-----DRSDEAAELCGRAGQGTTATPAACAPTAQFTCR-SG 262
Query: 302 KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCD 361
+CI W CD + DC D +DE + C NE +CG CV K C+
Sbjct: 263 ECIHLGWRCDGDRDCK-----DKSDE-----ADCSPGPCRENEFQCGDGT-CVLAIKRCN 311
Query: 362 GKPDCSNGEDE-------------------------GPFCNNKADCE------------- 383
+ DC +G DE G C+++ DC
Sbjct: 312 QERDCPDGSDEAGCLQESTCEGPRRFQCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLN 371
Query: 384 -----NLKCSHKCSPTPRGAMCFCPAG-QNPNKTQCVDADECLIDGSCDQTCTNTHLSYV 437
N CSH C+ G C CPAG Q ++ C D DEC +C Q C N +
Sbjct: 372 ECLHNNGGCSHICTDLKIGFECTCPAGFQLLDQKTCGDIDECQDPDACSQICVNYKGYFK 431
Query: 438 CSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHL 479
C C GY + K+C AV + S+IF++ ++RRI L
Sbjct: 432 CECHPGYEMDTLTKNCKAV---AGKSPSLIFTNRHEVRRIDL 470
Score = 75.5 bits (184), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 141/382 (36%), Gaps = 86/382 (22%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C ++ RC + +C+ L CD DCS+ DE C F+C G CIPE WKC
Sbjct: 41 CEEDQFRC-RNERCIPLVWRCDEDNDCSDNSDEDDCPKRTCADSDFTCDNGHCIPERWKC 99
Query: 225 DGFVDCLEDGSDEPN-TC-IHQCFNGQVQCA-LSKKCIPHNWLCDEEMDC--STDDIVDN 279
DG +C DGSDE TC +C ++ C S KC+P +W CD E DC D+
Sbjct: 100 DGEEEC-PDGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGEKDCEGGADEAGCP 158
Query: 280 TDEDWDKFH-------------------------------QCFNGQVQCALSKKCIPHNW 308
T +F C + +C CIP W
Sbjct: 159 TLCAPHEFQCSNRSCLASVFVCDGDDDCGDGSDERGCSDPACPPREFRCGGGGTCIPERW 218
Query: 309 LCDEEMDC--STDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDC 366
+CD + DC +D+ + + A + C S +C+ L CDG DC
Sbjct: 219 VCDRQFDCEDRSDEAAELCGRAGQGTTATPAACAPTAQFTC-RSGECIHLGWRCDGDRDC 277
Query: 367 SNGEDE-----GPFCNNKADCENLKC---------SHKCSPTPRGAMCFCPAG-QNPNKT 411
+ DE GP N+ C + C C A C + + P +
Sbjct: 278 KDKSDEADCSPGPCRENEFQCGDGTCVLAIKRCNQERDCPDGSDEAGCLQESTCEGPRRF 337
Query: 412 QCVDAD----------------------------ECLI-DGSCDQTCTNTHLSYVCSCTE 442
QC + ECL +G C CT+ + + C+C
Sbjct: 338 QCKSGECVDGGKVCDDQRDCRDWSDEPQKVCGLNECLHNNGGCSHICTDLKIGFECTCPA 397
Query: 443 GYTLRPDGKSCTAVNVPQDEPA 464
G+ L D K+C ++ QD A
Sbjct: 398 GFQLL-DQKTCGDIDECQDPDA 418
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 197 EGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSK 256
+GP EC QF C +CIP W+CD DC D SDE + C + C +
Sbjct: 35 QGPV--KECEEDQFRCRNERCIPLVWRCDEDNDC-SDNSDEDDCPKRTCADSDFTCD-NG 90
Query: 257 KCIPHNWLCDEEMDCSTDDIVDNTDEDWD--KFHQCFNGQVQCA-LSKKCIPHNWLCDEE 313
CIP W CD E +C D +DE +C ++ C S KC+P +W CD E
Sbjct: 91 HCIPERWKCDGEEECP-----DGSDESKATCSSEECPAEKLSCGPTSHKCVPASWRCDGE 145
Query: 314 MDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355
DC DE + LC P+E +C S+ C+A
Sbjct: 146 KDCE-----GGADE------AGCPTLCAPHEFQC-SNRSCLA 175
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
++EKAG++G +R LV+ NI+WP+ + +D LYW DS L+ + S+ +G + +
Sbjct: 594 FQAKIEKAGLNGADRQTLVSDNIEWPNGITLDLLSQRLYWVDSKLHQLSSIDFNGGNRKM 653
Query: 164 L 164
L
Sbjct: 654 L 654
>sp|Q2PC93|SSPO_CHICK SCO-spondin OS=Gallus gallus GN=SSPO PE=2 SV=1
Length = 5255
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E C S +CV + CD + DC +G DE C C P Q C G+C+P +C
Sbjct: 1363 CPDSEFPCRSGGRCVPGAWLCDNEDDCGDGSDE--VCALHCAPHQHRCADGQCVPWGARC 1420
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DGSDE C + +CA S +CIP +C+ E+DC D++DE
Sbjct: 1421 DGLSDC-GDGSDERGCPPPPCAPPEFRCA-SGRCIPRAHVCNGELDCG---FADDSDEA- 1474
Query: 285 DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344
C G+ QCA + +C+P+ C+ DC D +DE +C
Sbjct: 1475 GCSPSCSVGEFQCA-AGRCVPYPHRCNGHDDCG-----DFSDE--------RGCVCPAGH 1520
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
+C + QC+ + CDG DC +G DE FC ++ C
Sbjct: 1521 FQCPDA-QCLPPAALCDGMQDCGDGTDEA-FCPDRITC 1556
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A+ C P++ RC + QCV CDG DC +G DE C P +F C G+CIP +
Sbjct: 1398 ALHCAPHQHRC-ADGQCVPWGARCDGLSDCGDGSDERGCPPPPCAPPEFRCASGRCIPRA 1456
Query: 222 WKCDGFVDC-LEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280
C+G +DC D SDE C C G+ QCA + +C+P+ C+ DC D +
Sbjct: 1457 HVCNGELDCGFADDSDEAG-CSPSCSVGEFQCA-AGRCVPYPHRCNGHDDCG-----DFS 1509
Query: 281 DEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC 340
DE + C G QC +C+P LCD DC D TDE F + + C
Sbjct: 1510 DE---RGCVCPAGHFQCP-DAQCLPPAALCDGMQDCG-----DGTDE----AFCPDRITC 1556
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P +L C CV+ K CDG DC +G DE
Sbjct: 1557 APGQLPC-PDGSCVSQVKLCDGIWDCRDGWDE 1587
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 91/235 (38%), Gaps = 39/235 (16%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG----------------PFCNAE-- 204
+ C P +L C CV+ K CDG DC +G DE P A
Sbjct: 1554 ITCAPGQLPC-PDGSCVSQVKLCDGIWDCRDGWDESSVRCMVSWAPPAPTQLPTVPANGT 1612
Query: 205 ----CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260
C P +F C G+C+P W CD DC D SDE C C G CAL CI
Sbjct: 1613 AAPVCGPYEFPCRSGQCVPRGWVCDSEADC-PDNSDELG-CNRSCVLGHFPCALGAHCIH 1670
Query: 261 HNWLCDEEMDCS-----TDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
++ LCD C +DD +T H N +V C+ +CD +D
Sbjct: 1671 YDHLCDGIPHCPDHSDESDDNCGSTQIPPCPGHFVCNNRV-------CVNATRVCDGALD 1723
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
C + + E + N + E C C+ + C+G PDC +G+
Sbjct: 1724 CPQGED-ELACEGYVPTGERNQTVGPCAEYSC-RDGDCITFKQVCNGLPDCRDGD 1776
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-------------------QFSCGMGKCI 218
CV + CDG+ DC +G DE C A T G QFSCG G+C+
Sbjct: 2494 CVDAAMVCDGQQDCLDGSDEA-HCGALPTSGSSPSPLAWPSSPPPTCSPKQFSCGTGECL 2552
Query: 219 PESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALS 255
+CD DC DGSDE + CI + G QC+ S
Sbjct: 2553 ALEKRCDLSRDC-ADGSDESSCADCILSPWGGWSQCSHS 2590
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 84.0 bits (206), Expect = 2e-15, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 65/132 (49%), Gaps = 16/132 (12%)
Query: 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE---GPFCNAECTPGQFSCGM 214
GS + C P E C + C+ CDG+ DC +G DE GP C P +F CG
Sbjct: 278 GSVRPLPCGPQEAAC-RNGHCIPRDYLCDGQEDCEDGSDELDCGP--PPPCEPNEFPCGN 334
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMD 270
G C + W+CDG DC ED +DE N + C Q +C + CIP ++ CDEE D
Sbjct: 335 GHCALKLWRCDGDFDC-EDRTDEANCPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESD 393
Query: 271 CSTDDIVDNTDE 282
C D +DE
Sbjct: 394 CP-----DRSDE 400
Score = 69.3 bits (168), Expect = 6e-11, Method: Composition-based stats.
Identities = 65/222 (29%), Positives = 83/222 (37%), Gaps = 34/222 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----------GPFCNAECTPGQFSCGM 214
C E C S N+CVAL CD +PDC + DE P +
Sbjct: 199 CTEAEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVLGISPTFSLLVETTSLPPRP 258
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQ---CFNGQVQCALSKKCIPHNWLCDEEMDC 271
I L GS P C Q C NG CIP ++LCD + DC
Sbjct: 259 ETTIMRQPPVTHAPQPLLPGSVRPLPCGPQEAACRNGH--------CIPRDYLCDGQEDC 310
Query: 272 STDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330
D +DE D C + C + C W CD + DC D TDE +
Sbjct: 311 E-----DGSDELDCGPPPPCEPNEFPCG-NGHCALKLWRCDGDFDCE-----DRTDEA-N 358
Query: 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C P + RC S+N C+ S CD + DC + DE
Sbjct: 359 CPTKRPEEVCGPTQFRCVSTNMCIPASFHCDEESDCPDRSDE 400
>sp|Q92673|SORL_HUMAN Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2
Length = 2214
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDEDPV 1233
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP + CD DCS D +DE H LC H +
Sbjct: 1234 NCEKKCNG-FRCP-NGTCIPSSKHCDGLRDCS-----DGSDEQ------HCEPLCTHFMD 1280
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC+ S CDG C +G DE
Sbjct: 1281 FVCKNRQQCLFHSMVCDGIIQCRDGSDE 1308
Score = 78.6 bits (192), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 106/229 (46%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+ + QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTICDLDT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDTDCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N RC + C+ SK CDG DCS+G DE P C + D
Sbjct: 1233 VNCEKKCNGFRC-PNGTCIPSSKHCDGLRDCSDGSDEQHCEPLCTHFMD 1280
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 95/228 (41%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ + +C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHILPFSTPGPSTCLPNYY----RCS-SGTCVMDTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ + +C + +C K CIP+ CD DC D
Sbjct: 1446 DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 RDEA--NCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1078 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDERNCPTTICDLDTQFRCQESGTCIPLSY 1136
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1137 KCDLEDDCG-----DNSDESHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1183
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1184 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDTDCQDGSDEDP-VNCEKK 1238
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1239 CNGFRCPNGTCIPSSK 1254
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 97/246 (39%), Gaps = 37/246 (15%)
Query: 157 DGSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECT 206
D H LC H + C + QC+ S CDG C +G DE P + C
Sbjct: 1267 DEQHCEPLCTHFMDFVCKNRQQCLFHSMVCDGIIQCRDGSDEDAAFAGCSQDPEFHKVCD 1326
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPH 261
F C G CI WKCDG DC D SDE N T C Q +C + CIP+
Sbjct: 1327 EFGFQCQNGVCISLIWKCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFRCE-NGHCIPN 1384
Query: 262 NWLCDEEMDCST-DDIVDNTDEDWDKF-----HQCFNGQVQCALSKKCIPHNWLCDEEMD 315
W CD E DC D D D F C +C+ S C+ W+CD D
Sbjct: 1385 RWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCS-SGTCVMDTWVCDGYRD 1443
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNEL--------RCGSSNQCVALSKFCDGKPDCS 367
C+ D +DE+ ++ P +L C C+ K CDG DC
Sbjct: 1444 CA-----DGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKRCDGHQDCQ 1498
Query: 368 NGEDEG 373
+G DE
Sbjct: 1499 DGRDEA 1504
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCN---AECTPGQFSCGMGKC 217
+ RC + C+ CD + DC + DE PF + C P + C G C
Sbjct: 1373 QFRC-ENGHCIPNRWKCDRENDCGDWSDEKDCGDSHILPFSTPGPSTCLPNYYRCSSGTC 1431
Query: 218 IPESWKCDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWL 264
+ ++W CDG+ DC DGSDE T + +C + +C K CIP+
Sbjct: 1432 VMDTWVCDGYRDC-ADGSDEEACPLLANVTAASTPTQLGRCDRFEFECHQPKTCIPNWKR 1490
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
CD DC D DE H C + + QC + CI + CD +DCS
Sbjct: 1491 CDGHQDCQ-----DGRDEANCPTHSTLTCMSREFQCEDGEACIVLSERCDGFLDCS 1541
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 107/291 (36%), Gaps = 60/291 (20%)
Query: 104 LDERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV 163
L + ++ M G LV+++++WP+ + +D +YW D++L +E + G +V
Sbjct: 898 LKPGIYRSNMDGSAAYHLVSEDVKWPNGISVD--DQWIYWTDAYLECIERITFSGQQRSV 955
Query: 164 ----LCHP-------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSC 212
L HP NE+ +Q LS F K S E Q +
Sbjct: 956 ILDNLPHPYAIAVFKNEIYWDDWSQ---LSIFRASKYSGSQ---------MEILANQLTG 1003
Query: 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF---NGQVQCA----LSKKCIPHNWL- 264
M I K G C+ P C C N C +S +P L
Sbjct: 1004 LMDMKIFYKGKNTGSNACV------PRPCSLLCLPKANNSRSCRCPEDVSSSVLPSGDLM 1057
Query: 265 --CDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C + + V + C Q +C+ + CI W CD + DC
Sbjct: 1058 CDCPQGYQLKNNTCVKQEN-------TCLRNQYRCS-NGNCINSIWWCDFDNDCG----- 1104
Query: 323 DNTDEDWDKYFSHNAVLCHPN-ELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D +DE + +C + + RC S C+ LS CD + DC + DE
Sbjct: 1105 DMSDER-----NCPTTICDLDTQFRCQESGTCIPLSYKCDLEDDCGDNSDE 1150
Score = 33.9 bits (76), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1508 THSTLTCMSREFQCEDGEACIVLSERCDGFLDCSDESDE 1546
>sp|Q95209|SORL_RABIT Sortilin-related receptor OS=Oryctolagus cuniculus GN=SORL1 PE=2 SV=1
Length = 2213
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 93/210 (44%), Gaps = 23/210 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +++C G CI SW CDG
Sbjct: 1120 TQFRCQESGTCIPLSYKCDLEDDCGDNSDERHCEMHQCRSDEYNCSSGMCIRSSWVCDGD 1179
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1180 NDC-RDWSDEANCTAIYHTCEASNFQCR-NGHCIPQRWACDGDADCQ-----DGSDEDPA 1232
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNE 344
+ NG +C + CIP CD DCS D +DE H LC +
Sbjct: 1233 NCEKKCNG-FRCP-NGTCIPSTKHCDGLHDCS-----DGSDEQ------HCEPLCTRFMD 1279
Query: 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C + QC+ S CDG C +G DE P
Sbjct: 1280 FVCKNRQQCLFHSMVCDGIIQCRDGSDEDP 1309
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQC-FNGQVQCALSKKCIPHNW 263
C Q+ C G CI W CD DC D SDE N C + Q +C S CIP ++
Sbjct: 1077 CLRNQYRCSNGNCINSIWWCDFDNDC-GDMSDEKNCPTTICDLDTQFRCQESGTCIPLSY 1135
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
CD E DC DN+DE + HQC + + C+ S CI +W+CD + DC
Sbjct: 1136 KCDLEDDCG-----DNSDERHCEMHQCRSDEYNCS-SGMCIRSSWVCDGDNDC------- 1182
Query: 324 NTDEDWDKYFSHNAVL--CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKAD 381
DW + A+ C + +C + C+ CDG DC +G DE P N +
Sbjct: 1183 ---RDWSDEANCTAIYHTCEASNFQC-RNGHCIPQRWACDGDADCQDGSDEDP-ANCEKK 1237
Query: 382 CENLKCSH-KCSPTPR 396
C +C + C P+ +
Sbjct: 1238 CNGFRCPNGTCIPSTK 1253
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 95/231 (41%), Gaps = 57/231 (24%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1336 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFRCDNGHCIPNRWKCDRENDC-G 1394
Query: 233 DGSDE---------------PNTCI---HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274
D SDE P+TC+ ++C G C+ W+CD DC+
Sbjct: 1395 DWSDEKDCGDSHVLPSTTPAPSTCLPNYYRCGGG--------ACVIDTWVCDGYRDCA-- 1444
Query: 275 DIVDNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
D +DE+ + +C + +C KKCIP+ CD DC
Sbjct: 1445 ---DGSDEEACPSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQDCQ---- 1497
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
D DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1498 -DGQDEA--NCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCSDESDE 1545
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 70/170 (41%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G P + C P + CG G C+ ++W
Sbjct: 1380 CIPNRWKCDRENDCGDWSDEKDCGDSHVLPSTTPAP---STCLPNYYRCGGGACVIDTWV 1436
Query: 224 CDGFVDCLEDGSDE------PNTCIH-------QCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE PN +C + +C KKCIP+ CD D
Sbjct: 1437 CDGYRDC-ADGSDEEACPSLPNVTATSSPSQPGRCDRFEFECHQPKKCIPNWRRCDGHQD 1495
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1496 CQ-----DGQDEANCPTHSTLTCMSWEFKCEDGEACIVLSERCDGFLDCS 1540
Score = 42.0 bits (97), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ + CDG DC +G+DE C +F C G+ CI
Sbjct: 1470 CDRFEFECHQPKKCIPNWRRCDGHQDCQDGQDEANCPTHSTLTCMSWEFKCEDGEACIVL 1529
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1530 SERCDGFLDC-SDESDE 1545
>sp|O88307|SORL_MOUSE Sortilin-related receptor OS=Mus musculus GN=Sorl1 PE=2 SV=3
Length = 2215
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/229 (35%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCG-MGKCIP 219
C N+ RC + N C+ +CD DC + DE C+A+ QF C G CIP
Sbjct: 1078 CLRNQYRCSNGN-CINSIWWCDFDNDCGDMSDERNCPTTVCDADT---QFRCQESGTCIP 1133
Query: 220 ESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
S+KCD DC D SDE + +HQC + + C+ S CI +W+CD + DC D
Sbjct: 1134 LSYKCDLEDDC-GDNSDESHCEMHQCRSDEFNCS-SGMCIRSSWVCDGDNDCR-----DW 1186
Query: 280 TDED--WDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNA 337
+DE +H C QC + CIP W CD + DC D +DED
Sbjct: 1187 SDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDADCQ-----DGSDED--------P 1232
Query: 338 VLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNNKAD 381
V C N C + C+ SK CDG DC +G DE PFC D
Sbjct: 1233 VSCEKKCNGFHC-PNGTCIPSSKHCDGLRDCPDGSDEQHCEPFCTRFMD 1280
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/214 (34%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +F+C G CI SW CDG
Sbjct: 1121 TQFRCQESGTCIPLSYKCDLEDDCGDNSDESHCEMHQCRSDEFNCSSGMCIRSSWVCDGD 1180
Query: 228 VDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW- 284
DC D SDE N H C QC + CIP W CD + DC D +DED
Sbjct: 1181 NDC-RDWSDEANCTAIYHTCEASNFQCH-NGHCIPQRWACDGDADCQ-----DGSDEDPV 1233
Query: 285 ------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV 338
+ FH C NG CIP + CD DC D +DE + F +
Sbjct: 1234 SCEKKCNGFH-CPNG--------TCIPSSKHCDGLRDCP-----DGSDEQHCEPFCTRFM 1279
Query: 339 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ C + QC+ S CDG C +G DE
Sbjct: 1280 -----DFVCKNRQQCLFHSMVCDGIVQCRDGSDE 1308
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 97/228 (42%), Gaps = 51/228 (22%)
Query: 178 CVALSKFCDGKPDCSNGEDEGPFCNAECTPG-----QFSCGMGKCIPESWKCDGFVDCLE 232
C++L CDG DC + DE N P QF C G CIP WKCD DC
Sbjct: 1337 CISLIWKCDGMDDCGDYSDEANCENPTEAPNCSRYFQFHCENGHCIPNRWKCDRENDC-G 1395
Query: 233 DGSDE---------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
D SDE P+TC+ F+ C+ S C+ W+CD DC+
Sbjct: 1396 DWSDEKDCGDSHVLPSPTPGPSTCLPNYFH----CS-SGACVMGTWVCDGYRDCA----- 1445
Query: 278 DNTDEDW-------------DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 324
D +DE+ +F QC + +C KKCIP+ CD DC D
Sbjct: 1446 DGSDEEACPSLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQDCQ-----DG 1500
Query: 325 TDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DE +H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1501 QDEA--NCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDE 1546
Score = 69.3 bits (168), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 91/232 (39%), Gaps = 40/232 (17%)
Query: 172 CGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPGQFSCGMGKCIPESW 222
C + QC+ S CDG C +G DE P + EC F C G CI W
Sbjct: 1283 CKNRQQCLFHSMVCDGIVQCRDGSDEDAAFAGCSQDPEFHKECDEFGFQCQNGVCISLIW 1342
Query: 223 KCDGFVDCLEDGSDEPN----TCIHQCFNG-QVQCALSKKCIPHNWLCDEEMDCSTDDIV 277
KCDG DC D SDE N T C Q C + CIP+ W CD E DC D
Sbjct: 1343 KCDGMDDC-GDYSDEANCENPTEAPNCSRYFQFHCE-NGHCIPNRWKCDRENDCG--DWS 1398
Query: 278 DNTD--------EDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 329
D D C C+ S C+ W+CD DC+ D +DE+
Sbjct: 1399 DEKDCGDSHVLPSPTPGPSTCLPNYFHCS-SGACVMGTWVCDGYRDCA-----DGSDEEA 1452
Query: 330 DKYFSHNAVLCHPN--------ELRCGSSNQCVALSKFCDGKPDCSNGEDEG 373
+++ P E C +C+ K CDG DC +G+DE
Sbjct: 1453 CPSLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEA 1504
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 68/170 (40%), Gaps = 26/170 (15%)
Query: 165 CHPNELRCGSSNQCVALSKFCD-GKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
C PN +C N C S D G GP + C P F C G C+ +W
Sbjct: 1381 CIPNRWKCDRENDCGDWSDEKDCGDSHVLPSPTPGP---STCLPNYFHCSSGACVMGTWV 1437
Query: 224 CDGFVDCLEDGSDEPN-------------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMD 270
CDG+ DC DGSDE T QC + +C KKCIP+ CD D
Sbjct: 1438 CDGYRDC-ADGSDEEACPSLANSTAASTPTQFGQCDRFEFECHQPKKCIPNWKRCDGHQD 1496
Query: 271 CSTDDIVDNTDEDWDKFHQ---CFNGQVQCALSKKCIPHNWLCDEEMDCS 317
C D DE H C + + +C + CI + CD +DCS
Sbjct: 1497 CQ-----DGQDEANCPTHSTLTCTSREFKCEDGEACIVLSERCDGFLDCS 1541
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG---PFCNAECTPGQFSCGMGK-CIPE 220
C E C +C+ K CDG DC +G+DE CT +F C G+ CI
Sbjct: 1471 CDRFEFECHQPKKCIPNWKRCDGHQDCQDGQDEANCPTHSTLTCTSREFKCEDGEACIVL 1530
Query: 221 SWKCDGFVDCLEDGSDE 237
S +CDGF+DC D SDE
Sbjct: 1531 SERCDGFLDC-SDESDE 1546
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
+H+ + C E +C C+ LS+ CDG DCS+ DE
Sbjct: 1508 THSTLTCTSREFKCEDGEACIVLSERCDGFLDCSDESDE 1546
>sp|A2VEC9|SSPO_HUMAN SCO-spondin OS=Homo sapiens GN=SSPO PE=2 SV=1
Length = 5147
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 99/244 (40%), Gaps = 50/244 (20%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221
A C ++ C SS C+ L+ CD + DC +G DE + C G +C G+C+P +
Sbjct: 1413 APGCGEGQMTC-SSGHCLPLALLCDRQDDCGDGTDEPSY---PCPQGLLACADGRCLPPA 1468
Query: 222 WKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC-------- 271
CDG DCL D +DE +C+ Q C G+V C + C+ LCD DC
Sbjct: 1469 LLCDGHPDCL-DAADE-ESCLGQVTCVPGEVSC-VDGTCLGAIQLCDGVWDCPDGADEGP 1525
Query: 272 ---------------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLC 310
+ D + C + +C S +C P W C
Sbjct: 1526 GHCPLPSLPTPPASTLPGPSPGSLDTASSPLASASPAPPCGPFEFRCG-SGECTPRGWRC 1584
Query: 311 DEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGE 370
D+E DC+ D +DE C P+ C CV+ + CDG C +G
Sbjct: 1585 DQEEDCA-----DGSDER------GCGGPCAPHHAPCARGPHCVSPEQLCDGVRQCPDGS 1633
Query: 371 DEGP 374
DEGP
Sbjct: 1634 DEGP 1637
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 103/261 (39%), Gaps = 46/261 (17%)
Query: 157 DGSHNAVL---CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
DG H L C E C + CV CD + DC +G DE C GQ +C
Sbjct: 1365 DGGHCEELVPACAEGEALCQENGHCVPHGWLCDNQDDCGDGSDEEGCAAPGCGEGQMTCS 1424
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCST 273
G C+P + CD DC DG+DEP+ + C G + CA +C+P LCD DC
Sbjct: 1425 SGHCLPLALLCDRQDDC-GDGTDEPS---YPCPQGLLACA-DGRCLPPALLCDGHPDC-- 1477
Query: 274 DDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC--------------- 316
+D DE+ Q C G+V C + C+ LCD DC
Sbjct: 1478 ---LDAADEE-SCLGQVTCVPGEVSC-VDGTCLGAIQLCDGVWDCPDGADEGPGHCPLPS 1532
Query: 317 ----STDDIVDNTDEDWDKYFS-----HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCS 367
+ + D S A C P E RCG S +C CD + DC+
Sbjct: 1533 LPTPPASTLPGPSPGSLDTASSPLASASPAPPCGPFEFRCG-SGECTPRGWRCDQEEDCA 1591
Query: 368 NGEDE----GPFCNNKADCEN 384
+G DE GP + A C
Sbjct: 1592 DGSDERGCGGPCAPHHAPCAR 1612
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 127/372 (34%), Gaps = 96/372 (25%)
Query: 1 MIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLAL 60
++ C G+ C + C+PH WLCD + DC D +DE+ A
Sbjct: 1372 LVPACAEGEALCQENGHCVPHGWLCDNQDDCG-----DGSDEE-------------GCAA 1413
Query: 61 EFNHRNQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSP 120
Q C + + L C + +D + D P+ +P + L A G P
Sbjct: 1414 PGCGEGQMTC--SSGHCLPLALLCDRQDDCGDGTDEPS---YPCPQGL-LACADGRCLPP 1467
Query: 121 LVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVA 180
+ CD H + +++ + V C P E+ C C+
Sbjct: 1468 ALL--------------------CDGHPDCLDAADEESCLGQVTCVPGEVSC-VDGTCLG 1506
Query: 181 LSKFCDGKPDCSNGEDEGP------------------------------FCNAE----CT 206
+ CDG DC +G DEGP +A C
Sbjct: 1507 AIQLCDGVWDCPDGADEGPGHCPLPSLPTPPASTLPGPSPGSLDTASSPLASASPAPPCG 1566
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCD 266
P +F CG G+C P W+CD DC DGSDE C C CA C+ LCD
Sbjct: 1567 PFEFRCGSGECTPRGWRCDQEEDC-ADGSDE-RGCGGPCAPHHAPCARGPHCVSPEQLCD 1624
Query: 267 EEMDCSTDDIVDNTDEDWDKFH--QCFNGQVQCAL--------SKKCIPHNWLCDEEMDC 316
C D +DE D G + L + CI +CD + DC
Sbjct: 1625 GVRQCP-----DGSDEGPDACGGLPALGGPNRTGLPCPEYTCPNGTCIGFQLVCDGQPDC 1679
Query: 317 STDDIVDNTDED 328
V + E+
Sbjct: 1680 GRPGQVGPSPEE 1691
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 94/271 (34%), Gaps = 57/271 (21%)
Query: 10 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED----WDKYFKRILNGTHTLALEFNHR 65
++CA S +C+ CD +DC D +DE+ + R + TLAL
Sbjct: 2239 LRCA-SGECVLRGGPCDGVLDCE-----DGSDEEGCVLLPEGTGRFHSTAKTLALSSAQP 2292
Query: 66 NQSLCFIQQQNVSSVRLRCAQINDLLNSWDLPAPEIFPLDE-RLEKAGMHGENRSPLVTK 124
Q L + ++ + Q + + E P+ HGE+ + T
Sbjct: 2293 GQLLHWPREGLAETEHWPPGQESPTSPT------ETRPVSPGPASGVPHHGESVQMVTTT 2346
Query: 125 NIQWPSSLVIDYNQDILYWCDSHLNTVESVR----VDGSHNAVLCHPNELRCGSSNQCVA 180
I + + + H T + G V C P + C CV
Sbjct: 2347 PIPQMEARTLPPGMAAVTVVPPHPVTPATPAGQSVAPGPFPPVQCGPGQTPC-EVLGCVE 2405
Query: 181 LSKFCDGKPDCSNGEDEG----------------------------------PFCNAECT 206
++ CDG+ DC +G DE P A C+
Sbjct: 2406 QAQVCDGREDCLDGSDERHCARNLLMWLPSLPALWAASTVPFMMPTMALPGLPASRALCS 2465
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
P Q SCG G+C+ +CD DC +DGSDE
Sbjct: 2466 PSQLSCGSGECLSAERRCDLRPDC-QDGSDE 2495
Score = 35.4 bits (80), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 333 FSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ LC P++L CGS +C++ + CD +PDC +G DE
Sbjct: 2457 LPASRALCSPSQLSCGS-GECLSAERRCDLRPDCQDGSDE 2495
>sp|Q98930|SORL_CHICK Sortilin-related receptor (Fragment) OS=Gallus gallus GN=SORL1 PE=2
SV=1
Length = 1592
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 119/314 (37%), Gaps = 84/314 (26%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEG---------PFCNAECTPGQFSCGMGKCIP 219
+ C + QC++ S CDG C +G DE P + C F C G CI
Sbjct: 1187 DFVCKNRQQCLSHSMVCDGDIQCEDGSDEDANYAGCAQEPEFHRTCDQFSFQCANGVCIS 1246
Query: 220 ESWKCDGFVDCLEDGSDEPN--------TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC 271
WKCDG DC D SDE + TC Q QC + CIP+ W CD E DC
Sbjct: 1247 LVWKCDGMDDC-GDYSDEASCENPTDAPTCSRYY---QFQCG-NGHCIPNQWKCDGENDC 1301
Query: 272 STDDIVDNTDEDWDKF--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
D D + + C +C S CI ++W+CD DC+ D
Sbjct: 1302 G--DWSDEKECEGSPLLPITTAVPPTCLPNHFRCG-SGACITNSWVCDGYRDCA-----D 1353
Query: 324 NTDEDWDKYFSHNAVLCHP---------NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
+DED SH V P E C ++C+ K CDG+ DC +G DE
Sbjct: 1354 GSDEDACPT-SHPNVTSSPPAPRGRCSRTEFECQQLHKCIPNWKRCDGRRDCQDGTDE-- 1410
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLI------------D 422
+ PT C P +C D + CL+ D
Sbjct: 1411 ---------------RSCPTHSSLSC-------PQGYRCEDGEACLLATERCDGYLDCSD 1448
Query: 423 GSCDQTCTNTHLSY 436
GS ++ CT+ + Y
Sbjct: 1449 GSDERNCTDDTIVY 1462
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 138/363 (38%), Gaps = 110/363 (30%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGS----- 159
+R+E+ +G RS ++ ++ P ++ + N+ +YW D S L+ + + GS
Sbjct: 848 DRIERVDFNGLQRS-VILDSLPHPYAIAVFKNE--IYWNDWSQLSIFRASKNSGSRMETL 904
Query: 160 --------------------HNAVLCHPNELRC------GSSNQC---VALSKFCDG--K 188
NA + HP L C G S +C V+ + G K
Sbjct: 905 VGRLYGIMDMKIFYRGKTTGQNACIAHPCSLLCLPKSNNGRSCKCPEGVSSTVLPSGEVK 964
Query: 189 PDCSNGED-EGPFCNAE---CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ 244
DC +G + C E C P Q+ C G CI W+CD DC D SDE N
Sbjct: 965 CDCPHGYSMKNNTCVKEENTCLPNQYRCFNGNCINSIWQCDNNNDC-GDMSDEKNCPTTV 1023
Query: 245 C-FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCA----- 298
C Q +C S CIP ++ CD E DC DN+DE + HQC + C+
Sbjct: 1024 CDAETQFRCRESGTCIPLSYKCDLEDDCG-----DNSDESHCEAHQCRKDEFSCSSGMCI 1078
Query: 299 ----------------------------------LSKKCIPHNWLCDEEMDCSTDDIVDN 324
L+ CIP W CD + DC D
Sbjct: 1079 RLSWRCDDDNDCRDWSDEANCTMFRTCEASSFQCLNGHCIPQRWACDGDADCQ-----DG 1133
Query: 325 TDEDWDKYFSHNAVLCHP--NELRCGSSNQCVALSKFCDGKPDCSNGEDEG----PFCNN 378
+DED +C N +C + C++ SK C+G DC++ DE P C
Sbjct: 1134 SDED--------PTICEKKCNGFQC-PNGTCISTSKHCNGITDCADASDEQDCEIPLCTR 1184
Query: 379 KAD 381
D
Sbjct: 1185 YMD 1187
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 168 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGF 227
+ RC S C+ LS CD + DC + DE +C +FSC G CI SW+CD
Sbjct: 1028 TQFRCRESGTCIPLSYKCDLEDDCGDNSDESHCEAHQCRKDEFSCSSGMCIRLSWRCDD- 1086
Query: 228 VDCLEDGSDEPN-TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286
+ D SDE N T C QC L+ CIP W CD + DC D +DED
Sbjct: 1087 DNDCRDWSDEANCTMFRTCEASSFQC-LNGHCIPQRWACDGDADCQ-----DGSDEDPTI 1140
Query: 287 FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNEL 345
+ NG QC + CI + C+ DC+ D +DE LC +
Sbjct: 1141 CEKKCNG-FQCP-NGTCISTSKHCNGITDCA-----DASDEQ-----DCEIPLCTRYMDF 1188
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE 372
C + QC++ S CDG C +G DE
Sbjct: 1189 VCKNRQQCLSHSMVCDGDIQCEDGSDE 1215
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 83/217 (38%), Gaps = 38/217 (17%)
Query: 165 CHPNELRCGSSNQCVALS--KFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
C PN+ +C N C S K C+G P P C P F CG G CI SW
Sbjct: 1288 CIPNQWKCDGENDCGDWSDEKECEGSPLLPITTAVPP----TCLPNHFRCGSGACITNSW 1343
Query: 223 KCDGFVDCLEDGSDE-------------PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
CDG+ DC DGSDE P +C + +C KCIP+ CD
Sbjct: 1344 VCDGYRDC-ADGSDEDACPTSHPNVTSSPPAPRGRCSRTEFECQQLHKCIPNWKRCDGRR 1402
Query: 270 DCSTDDIVDNTDEDWDKFHQCFN--GQVQCALSKKCIPHNWLCDEEMDCS--------TD 319
DC D TDE H + +C + C+ CD +DCS TD
Sbjct: 1403 DCQ-----DGTDERSCPTHSSLSCPQGYRCEDGEACLLATERCDGYLDCSDGSDERNCTD 1457
Query: 320 DIVDNTDED--WDKYFSHNAVLCHPNELRCGSSNQCV 354
D + ++ W FS L R SS CV
Sbjct: 1458 DTIVYKVQNLQWTADFSGAITLTWARPKRM-SSTSCV 1493
>sp|Q05793|PGBM_MOUSE Basement membrane-specific heparan sulfate proteoglycan core
protein OS=Mus musculus GN=Hspg2 PE=1 SV=1
Length = 3707
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCNAECTPGQFSCGMGKCIPESWK 223
C P E C S C+ CDG+ DC +G DE G C P +F+C G C + W+
Sbjct: 285 CGPQEASC-HSGHCIPRDYLCDGQEDCRDGSDELGCASPPPCEPNEFACENGHCALKLWR 343
Query: 224 CDGFVDCLEDGSDEPNTCIHQ----CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDN 279
CDG DC ED +DE N + Q C QC + +CIP ++ CDEE DC D
Sbjct: 344 CDGDFDC-EDRTDEANCSVKQPGEVCGPTHFQCVSTNRCIPASFHCDEESDCP-----DR 397
Query: 280 TDE 282
+DE
Sbjct: 398 SDE 400
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 87/255 (34%), Gaps = 98/255 (38%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-------------------------- 197
+C E C S N+CVAL CD +PDC + DE
Sbjct: 198 VCTETEFACHSYNECVALEYRCDRRPDCRDMSDELNCEEPVPELSSSTPAVGKVSPLPLW 257
Query: 198 -------------GPFCNAECTPGQFSCG-------MGKCIPESWKCDGFVDCLEDGSDE 237
GP PG +CG G CIP + CDG DC DGSDE
Sbjct: 258 PEAATTPPPPVTHGPQFLLPSVPGPSACGPQEASCHSGHCIPRDYLCDGQEDC-RDGSDE 316
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
+ CA C P+ + C+ NG C
Sbjct: 317 ------------LGCASPPPCEPNEFACE-------------------------NGH--C 337
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
AL W CD + DC D TDE + +C P +C S+N+C+ S
Sbjct: 338 ALKL------WRCDGDFDCE-----DRTDEA-NCSVKQPGEVCGPTHFQCVSTNRCIPAS 385
Query: 358 KFCDGKPDCSNGEDE 372
CD + DC + DE
Sbjct: 386 FHCDEESDCPDRSDE 400
>sp|P98167|SSPO_BOVIN SCO-spondin OS=Bos taurus GN=SSPO PE=2 SV=2
Length = 5146
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 96/244 (39%), Gaps = 56/244 (22%)
Query: 175 SNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
S +C+ L CDG+ DC +G DE C +C G C+P + CDG DC DG
Sbjct: 1422 SGRCLPLVLLCDGQDDCGDGMDEQ---GCPCPQDSLTCADGHCLPPARLCDGHPDC-PDG 1477
Query: 235 SDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC-------------------ST 273
+DE +C+ Q C G+V C + C+ LCD DC
Sbjct: 1478 ADE-ESCLGQVDCAPGEVSC-VDGTCLGAIQLCDGVWDCLDGGDEGPGHCPLPSLPTPPA 1535
Query: 274 DDIVDNTDEDWDKFH-----------QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
+ + W K H C C S +C P W CD E DC+
Sbjct: 1536 GTLPGPSAVSW-KLHLPPWPVSALRLPCGPLDFACG-SGECAPRGWRCDGEEDCA----- 1588
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
D +DE S C P+ C + CVA + CDG P C +G DE P C
Sbjct: 1589 DGSDE------SGCDRPCAPHHAPCARGSHCVAAEQLCDGVPHCPDGSDEDP-----GAC 1637
Query: 383 ENLK 386
E L+
Sbjct: 1638 ERLQ 1641
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C G+ C S C+PH WLCD + DC D +DE+ C GQV C S +C+
Sbjct: 1373 CAEGETPCRESGHCVPHGWLCDNQDDCG-----DGSDEEGCATRVCGEGQVSC-CSGRCL 1426
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P LCD + DC D DE C + L C + C+ ++ CDG P
Sbjct: 1427 PLVLLCDGQDDCG-----DGMDE--------QGCPCPQDSLTC-ADGHCLPPARLCDGHP 1472
Query: 365 DCSNGEDEGPFCNNKADC 382
DC +G DE C + DC
Sbjct: 1473 DCPDGADEE-SCLGQVDC 1489
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 196 DEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALS 255
+ GP C TP + S G C+P W CD DC DGSDE C GQV C S
Sbjct: 1368 EPGPGCAEGETPCRES---GHCVPHGWLCDNQDDC-GDGSDEEGCATRVCGEGQVSC-CS 1422
Query: 256 KKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMD 315
+C+P LCD + DC D DE + C + CA C+P LCD D
Sbjct: 1423 GRCLPLVLLCDGQDDCG-----DGMDE---QGCPCPQDSLTCA-DGHCLPPARLCDGHPD 1473
Query: 316 CSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
C D DE+ V C P E+ C C+ + CDG DC +G DEGP
Sbjct: 1474 CP-----DGADEE----SCLGQVDCAPGEVSC-VDGTCLGAIQLCDGVWDCLDGGDEGP 1522
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 82/239 (34%), Gaps = 53/239 (22%)
Query: 176 NQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDG 234
C+ ++ CDG PDC +G DE +C PG+ SC G C+ CDG DCL+ G
Sbjct: 1459 GHCLPPARLCDGHPDCPDGADEESCLGQVDCAPGEVSCVDGTCLGAIQLCDGVWDCLDGG 1518
Query: 235 SDEPNTCIHQCFNGQVQCAL--------------------------------SKKCIPHN 262
+ P C L S +C P
Sbjct: 1519 DEGPGHCPLPSLPTPPAGTLPGPSAVSWKLHLPPWPVSALRLPCGPLDFACGSGECAPRG 1578
Query: 263 WLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
W CD E DC+ D +DE C CA C+ LCD C
Sbjct: 1579 WRCDGEEDCA-----DGSDES-GCDRPCAPHHAPCARGSHCVAAEQLCDGVPHCP----- 1627
Query: 323 DNTDEDWDKYFSHNAVLCHPN-------ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
D +DED A PN E C C+ + CDG+PDC GP
Sbjct: 1628 DGSDEDPGACERLQAPG-GPNRTGLPCPEYSC-PDGLCIGFQQVCDGQPDCELAGTAGP 1684
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 89/234 (38%), Gaps = 39/234 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S CV CD + DC +G DE C GQ SC G+C+P C
Sbjct: 1373 CAEGETPCRESGHCVPHGWLCDNQDDCGDGSDEEGCATRVCGEGQVSCCSGRCLPLVLLC 1432
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DG DE C + CA C+P LCD DC D DE+
Sbjct: 1433 DGQDDC-GDGMDEQGC---PCPQDSLTCA-DGHCLPPARLCDGHPDCP-----DGADEE- 1481
Query: 285 DKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDC-------------------STDDIVD 323
Q C G+V C + C+ LCD DC +
Sbjct: 1482 SCLGQVDCAPGEVSC-VDGTCLGAIQLCDGVWDCLDGGDEGPGHCPLPSLPTPPAGTLPG 1540
Query: 324 NTDEDWDKYF-----SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
+ W + S + C P + CG S +C CDG+ DC++G DE
Sbjct: 1541 PSAVSWKLHLPPWPVSALRLPCGPLDFACG-SGECAPRGWRCDGEEDCADGSDE 1593
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 79/229 (34%), Gaps = 52/229 (22%)
Query: 144 CDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP---- 199
CD H + + + V C P E+ C C+ + CDG DC +G DEGP
Sbjct: 1468 CDGHPDCPDGADEESCLGQVDCAPGEVSC-VDGTCLGAIQLCDGVWDCLDGGDEGPGHCP 1526
Query: 200 ------------------------------FCNAECTPGQFSCGMGKCIPESWKCDGFVD 229
C P F+CG G+C P W+CDG D
Sbjct: 1527 LPSLPTPPAGTLPGPSAVSWKLHLPPWPVSALRLPCGPLDFACGSGECAPRGWRCDGEED 1586
Query: 230 CLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFH- 288
C DGSDE + C C CA C+ LCD C D +DED
Sbjct: 1587 C-ADGSDE-SGCDRPCAPHHAPCARGSHCVAAEQLCDGVPHCP-----DGSDEDPGACER 1639
Query: 289 -QCFNGQVQCALS--------KKCIPHNWLCDEEMDCSTDDIVDNTDED 328
Q G + L CI +CD + DC + E+
Sbjct: 1640 LQAPGGPNRTGLPCPEYSCPDGLCIGFQQVCDGQPDCELAGTAGPSPEE 1688
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 53/122 (43%), Gaps = 32/122 (26%)
Query: 156 VDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAE----------- 204
G V C P ++ C CV L + CDG+ DC +G DE P A
Sbjct: 2374 TPGPFPHVQCSPGQVPC-EVLGCVELEQLCDGREDCLDGSDERPCAWAAGTVPFTVPTTT 2432
Query: 205 ----------CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCAL 254
C+P Q +CG G+C+P +CD +DC +DGSDE NG V C L
Sbjct: 2433 LPGLPASRDLCSPSQLTCGSGECLPVERRCDLQLDC-QDGSDE---------NGCVDCGL 2482
Query: 255 SK 256
+
Sbjct: 2483 AP 2484
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 112/327 (34%), Gaps = 79/327 (24%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGK-CIPES 221
+ C P + CGS +C CDG+ DC++G DE C+ C P C G C+
Sbjct: 1560 LPCGPLDFACGS-GECAPRGWRCDGEEDCADGSDES-GCDRPCAPHHAPCARGSHCVAAE 1617
Query: 222 WKCDGFVDCLEDGSDE-PNTCIH-QCFNGQVQCALS--------KKCIPHNWLCDEEMDC 271
CDG C DGSDE P C Q G + L CI +CD + DC
Sbjct: 1618 QLCDGVPHC-PDGSDEDPGACERLQAPGGPNRTGLPCPEYSCPDGLCIGFQQVCDGQPDC 1676
Query: 272 STDDIVDNTDED--------WDKFHQCFN--GQVQCALSKKCIPHN----WLCDEEMDCS 317
+ E+ W + C G S++C P + W C +
Sbjct: 1677 ELAGTAGPSPEEQGCGAWGPWSPWELCSRTCGPGVQGWSRRCSPPSLPVLWHCPGPERQT 1736
Query: 318 TDDIVDNTDED-----WDKY---------FSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
ED W ++ + CHP + C L G
Sbjct: 1737 RACFAAACPEDGVWTSWSRWSPCSEPCGGVTARHRECHPPQ---NGGRTCATL----PGG 1789
Query: 364 PDCSNGEDEGPFCNNKADCENLKCS-----HKCSPTP------------------RGAMC 400
P + P + C N+ CS H C P P G C
Sbjct: 1790 PPSTRETRPCP----QDGCPNVTCSGELVFHACVPCPLTCDDISGQATCPPDRPCGGPGC 1845
Query: 401 FCPAGQNPN-KTQCVDADE--CLIDGS 424
+CPAGQ + +CV + CL+DGS
Sbjct: 1846 WCPAGQVLGAQGRCVWPRQCPCLVDGS 1872
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 50/133 (37%), Gaps = 21/133 (15%)
Query: 128 WPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAV----------LCHPNELRCGSSNQ 177
WP S + + + C S R DG + C P+ C +
Sbjct: 1553 WPVSALRLPCGPLDFACGSGECAPRGWRCDGEEDCADGSDESGCDRPCAPHHAPCARGSH 1612
Query: 178 CVALSKFCDGKPDCSNGEDEGP-FCNAECTPG----------QFSCGMGKCIPESWKCDG 226
CVA + CDG P C +G DE P C PG ++SC G CI CDG
Sbjct: 1613 CVAAEQLCDGVPHCPDGSDEDPGACERLQAPGGPNRTGLPCPEYSCPDGLCIGFQQVCDG 1672
Query: 227 FVDCLEDGSDEPN 239
DC G+ P+
Sbjct: 1673 QPDCELAGTAGPS 1685
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 115/332 (34%), Gaps = 76/332 (22%)
Query: 97 PAPEIFPLDERLEKAGMHGENRSPLVTKNIQ------WPSSLVIDYNQDILYWCDSHLNT 150
PAP++FP + +G + + + +Q WPS D + D++L+
Sbjct: 2163 PAPQLFPKN-------WNGPSTVWMFARMVQARHVRVWPS----DGHHQAAPSSDANLDG 2211
Query: 151 VESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQF 210
V + G A LC RC S +C CDG DC +G DE G+
Sbjct: 2212 PLRVELLGCEPAPLCLGVGHRC-VSGECAPRGAPCDGVEDCKDGSDEEGCVTPPAGAGRI 2270
Query: 211 SCGMGKCIPESWK--------CDGFVDCLED------GSDEPNTC---------IHQCFN 247
P S + +G + D GS P T H
Sbjct: 2271 ESTAWSSAPSSAQPGQLPPQPSEGLAEAEADHWHPGRGSPVPPTGKGPASLGSEPHPSPG 2330
Query: 248 GQVQCALSKKCIPHNWLCDEEMDCST---------DDIVDNTDEDWDKFH--QCFNGQVQ 296
G VQ ++ P EM T ++ F QC GQV
Sbjct: 2331 GSVQ-TVTPTSQPEAQALRPEMAAVTVLPPHPMVTPEVPAGRSTTPGPFPHVQCSPGQVP 2389
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAV----------------LC 340
C + C+ LCD DC +D +DE + + LC
Sbjct: 2390 CEV-LGCVELEQLCDGREDC-----LDGSDERPCAWAAGTVPFTVPTTTLPGLPASRDLC 2443
Query: 341 HPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
P++L CGS +C+ + + CD + DC +G DE
Sbjct: 2444 SPSQLTCGS-GECLPVERRCDLQLDCQDGSDE 2474
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 52/125 (41%), Gaps = 37/125 (29%)
Query: 198 GPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-------------------P 238
GPF + +C+PGQ C + C+ CDG DCL DGSDE P
Sbjct: 2376 GPFPHVQCSPGQVPCEVLGCVELEQLCDGREDCL-DGSDERPCAWAAGTVPFTVPTTTLP 2434
Query: 239 NTCIHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
+ C Q+ C S +C+P CD ++DC D +DE NG V
Sbjct: 2435 GLPASRDLCSPSQLTCG-SGECLPVERRCDLQLDCQ-----DGSDE---------NGCVD 2479
Query: 297 CALSK 301
C L+
Sbjct: 2480 CGLAP 2484
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 43
C G+ C S C+PH WLCD + DC D +DE+
Sbjct: 1373 CAEGETPCRESGHCVPHGWLCDNQDDCG-----DGSDEE 1406
>sp|Q8CG65|SSPO_MOUSE SCO-spondin OS=Mus musculus GN=Sspo PE=2 SV=2
Length = 4998
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 95/240 (39%), Gaps = 46/240 (19%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWK 223
+C ++ C S C+ LS CDG+ DC +G DE C G +C G+C+P +
Sbjct: 1293 VCGEGQMSC-QSGHCLPLSLICDGQDDCGDGTDEQ---GCLCPHGSLACADGRCLPPALL 1348
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDC------------ 271
C+G DCL+ +E C +G+V C + C+ LCD DC
Sbjct: 1349 CNGHPDCLDAADEESCLGPVSCISGEVSC-VDGTCVRTIQLCDGVWDCPDGADEGPSHCS 1407
Query: 272 -----------------STDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
S+ D + C + QC S +C P W CD+E
Sbjct: 1408 LPSLPTPPGGIGQNPSTSSLDTAPSPVGSTSPASPCSLLEFQCN-SGECTPRGWRCDQEE 1466
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374
DC+ D +DE C ++ C S CV+ + CDG C +G DE P
Sbjct: 1467 DCT-----DGSDE------LDCGGPCMLYQVPCAHSPHCVSPGQLCDGVTQCPDGSDEDP 1515
Score = 62.4 bits (150), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C + CV L CD + DC +G DE + C GQ SC G C+P S C
Sbjct: 1254 CAEGETLCRENGHCVPLEWLCDNQDDCGDGSDEEGCATSVCGEGQMSCQSGHCLPLSLIC 1313
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DG+DE C+ C +G + CA +C+P LC+ DC +D DE+
Sbjct: 1314 DGQDDC-GDGTDE-QGCL--CPHGSLACA-DGRCLPPALLCNGHPDC-----LDAADEES 1363
Query: 285 -DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
C +G+V C + C+ LCD DC
Sbjct: 1364 CLGPVSCISGEVSC-VDGTCVRTIQLCDGVWDC 1395
Score = 55.8 bits (133), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 94/255 (36%), Gaps = 62/255 (24%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE----GPFCNAECTPGQFSCGMGKCIP 219
LC L C + +C+ + C+G PDC + DE GP C G+ SC G C+
Sbjct: 1329 LCPHGSLAC-ADGRCLPPALLCNGHPDCLDAADEESCLGPV---SCISGEVSCVDGTCVR 1384
Query: 220 ESWKCDGFVDCLEDGSDE------------PNTCIHQ----------------------C 245
CDG DC DG+DE P I Q C
Sbjct: 1385 TIQLCDGVWDC-PDGADEGPSHCSLPSLPTPPGGIGQNPSTSSLDTAPSPVGSTSPASPC 1443
Query: 246 FNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIP 305
+ QC S +C P W CD+E DC+ D +DE D C QV CA S C+
Sbjct: 1444 SLLEFQCN-SGECTPRGWRCDQEEDCT-----DGSDE-LDCGGPCMLYQVPCAHSPHCVS 1496
Query: 306 HNWLCDEEMDCSTDDIVDNTDEDWD------KYFSHNAVLCHPNELRCGSSNQCVALSKF 359
LCD C D +DED D N E C C+
Sbjct: 1497 PGQLCDGVTQCP-----DGSDEDPDVCEEQSASGGANRTGAPCPEFSC-PDGTCIDFLLV 1550
Query: 360 CDGKPDCSNGEDEGP 374
CDG PDC ++ P
Sbjct: 1551 CDGNPDCELADETEP 1565
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------------------PFCNAECT 206
C P ++ C CV + CDG+ DC +G DE P A C+
Sbjct: 2243 CGPGQVPCDVLG-CVEQEQLCDGREDCLDGSDEQHCASAEPFTVPTTALPGLPASKALCS 2301
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT--CIHQCFNGQVQCALS 255
P Q CG G+C+P +CD V+C +DGSDE N C+ ++G C+ S
Sbjct: 2302 PSQLRCGSGECLPFEHRCDLQVNC-QDGSDEDNCVDCVLAPWSGWSDCSRS 2351
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 48/114 (42%), Gaps = 24/114 (21%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQ--- 244
PF C PGQ C + C+ + CDG DCL DGSDE P T +
Sbjct: 2237 PFPPMPCGPGQVPCDVLGCVEQEQLCDGREDCL-DGSDEQHCASAEPFTVPTTALPGLPA 2295
Query: 245 ----CFNGQVQCALSKKCIPHNWLCDEEMDCS----TDDIVDNTDEDWDKFHQC 290
C Q++C S +C+P CD +++C D+ VD W + C
Sbjct: 2296 SKALCSPSQLRCG-SGECLPFEHRCDLQVNCQDGSDEDNCVDCVLAPWSGWSDC 2348
Score = 33.9 bits (76), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 11/82 (13%)
Query: 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG----------QFSCGMGKC 217
++ C S CV+ + CDG C +G DE P C + G +FSC G C
Sbjct: 1485 QVPCAHSPHCVSPGQLCDGVTQCPDGSDEDPDVCEEQSASGGANRTGAPCPEFSCPDGTC 1544
Query: 218 IPESWKCDGFVDCLEDGSDEPN 239
I CDG DC EP+
Sbjct: 1545 IDFLLVCDGNPDCELADETEPS 1566
Score = 32.3 bits (72), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 150 TVESVRVDG-SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 197
TV + + G + LC P++LRCG S +C+ CD + +C +G DE
Sbjct: 2284 TVPTTALPGLPASKALCSPSQLRCG-SGECLPFEHRCDLQVNCQDGSDE 2331
>sp|P46023|GR101_LYMST G-protein coupled receptor GRL101 OS=Lymnaea stagnalis PE=2 SV=1
Length = 1115
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 106/272 (38%), Gaps = 59/272 (21%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236
QCV + CDG DC NG DE C +F C CI + +CD DC +G D
Sbjct: 52 QCVLMGSKCDGVSDCENGMDESVE-TCGCLQSEFQCNHTTCIDKILRCDRNDDC-SNGLD 109
Query: 237 EPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQ 296
E I+ C G + C+P + CD DC DN+DE + +C + +
Sbjct: 110 ERECDIYICPLGTHVKWHNHFCVPRDKQCDFLDDCG-----DNSDEKICERRECVATEFK 164
Query: 297 CALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW-----DKYFS----------------- 334
C + +C+ LCD +DC VD +DED DKYF
Sbjct: 165 CN-NSQCVAFGNLCDGLVDC-----VDGSDEDQVACDSDKYFQCAEGSLIKKEFVCDGWV 218
Query: 335 ---------HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENL 385
N LC ++ RC S +C+ S CDG DC +DE NN C
Sbjct: 219 DCKLTFADELNCKLCDEDDFRC-SDTRCIQKSNVCDGYCDCKTCDDEEVCANNTYGC--- 274
Query: 386 KCSHKCSPTPRGAMCFCPAGQNPNKTQCVDAD 417
P MC G+ +C+D D
Sbjct: 275 -------PMDTKYMCRSIYGE----PRCIDKD 295
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 88/195 (45%), Gaps = 18/195 (9%)
Query: 177 QCVALSKFCDGKPDCSNGEDEGP-FCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGS 235
+C+A +CD PDC NGEDE +C+ +F C GKCIP S +CD DC+ D S
Sbjct: 338 RCLAKHLYCDLHPDCINGEDEQSCLAPPKCSQDEFQCHHGKCIPISKRCDSVHDCV-DWS 396
Query: 236 DEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQ 294
DE N HQC C LS CI + C+ +C D +DE D D C Q
Sbjct: 397 DEMNCENHQCAANMKSC-LSGHCIEEHKWCNFHRECP-----DGSDEKDCDPRPVCEANQ 450
Query: 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCV 354
+C + +CI D C D D D + + +C + RC S C+
Sbjct: 451 FRCK-NGQCI------DPLQVCVKGDKYDGC-ADQSHLINCSQHICLEGQFRCRKSF-CI 501
Query: 355 ALSKFCDGKPDCSNG 369
+K CDG DC G
Sbjct: 502 NQTKVCDGTVDCLQG 516
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 107/250 (42%), Gaps = 41/250 (16%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNAECTPGQFSCGMGKCIPESWK 223
C E +C +S QCVA CDG DC +G DE C+++ F C G I + +
Sbjct: 158 CVATEFKCNNS-QCVAFGNLCDGLVDCVDGSDEDQVACDSD---KYFQCAEGSLIKKEFV 213
Query: 224 CDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 283
CDG+VDC +DE N + C +C+ +CI + +CD DC T D DE+
Sbjct: 214 CDGWVDCKLTFADELNCKL--CDEDDFRCS-DTRCIQKSNVCDGYCDCKTCD-----DEE 265
Query: 284 WDKFHQCFNGQVQCALSKK-----------CIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 332
C N C + K CI + +C+ DC ++ TDE Y
Sbjct: 266 -----VCANNTYGCPMDTKYMCRSIYGEPRCIDKDNVCNMINDCRDGNV--GTDE----Y 314
Query: 333 FSHNAVLCHPNELRCG----SSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKC 387
+ N C + G +C+A +CD PDC NGEDE K + +C
Sbjct: 315 YCSNDSECKNFQAAMGFFYCPEERCLAKHLYCDLHPDCINGEDEQSCLAPPKCSQDEFQC 374
Query: 388 SH-KCSPTPR 396
H KC P +
Sbjct: 375 HHGKCIPISK 384
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 85/207 (41%), Gaps = 30/207 (14%)
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGP----FCNAECTPGQFSC--GMGKCIPESWKCDG 226
G++ C+ G N + E P C+ E G F C GM +C+ KCDG
Sbjct: 6 GTTIVCLIYLTTMLGNSQGVNLKIESPSPPTLCSVE---GTFHCDDGMLQCVLMGSKCDG 62
Query: 227 FVDCLEDGSDEP-NTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 285
DC E+G DE TC C + QC CI CD DCS + DE
Sbjct: 63 VSDC-ENGMDESVETC--GCLQSEFQCN-HTTCIDKILRCDRNDDCS-----NGLDEREC 113
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345
+ C G + C+P + CD DC DN+DE + C E
Sbjct: 114 DIYICPLGTHVKWHNHFCVPRDKQCDFLDDCG-----DNSDEKICERRE-----CVATEF 163
Query: 346 RCGSSNQCVALSKFCDGKPDCSNGEDE 372
+C +S QCVA CDG DC +G DE
Sbjct: 164 KCNNS-QCVAFGNLCDGLVDCVDGSDE 189
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C +E +C +C+ +SK CD DC + DE N +C SC G CI E C
Sbjct: 367 CSQDEFQC-HHGKCIPISKRCDSVHDCVDWSDEMNCENHQCAANMKSCLSGHCIEEHKWC 425
Query: 225 DGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPHNWLC---DEEMDCSTDDIVDN 279
+ +C DGSDE + C + C Q +C + +CI +C D+ C+ + N
Sbjct: 426 NFHREC-PDGSDEKD-CDPRPVCEANQFRCK-NGQCIDPLQVCVKGDKYDGCADQSHLIN 482
Query: 280 TDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ H C GQ +C S CI +CD +DC
Sbjct: 483 CSQ-----HICLEGQFRCRKS-FCINQTKVCDGTVDC 513
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 96/252 (38%), Gaps = 47/252 (18%)
Query: 161 NAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMG----- 215
N LC ++ RC S +C+ S CDG DC +DE C + C M
Sbjct: 229 NCKLCDEDDFRC-SDTRCIQKSNVCDGYCDCKTCDDE-----EVCANNTYGCPMDTKYMC 282
Query: 216 -------KCIPESWKCDGFVDCLED--GSDEPN-TCIHQCFNGQVQCAL----SKKCIPH 261
+CI + C+ DC + G+DE + +C N Q ++C+
Sbjct: 283 RSIYGEPRCIDKDNVCNMINDCRDGNVGTDEYYCSNDSECKNFQAAMGFFYCPEERCLAK 342
Query: 262 NWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDI 321
+ CD DC I ++ +C + QC KCIP + CD DC
Sbjct: 343 HLYCDLHPDC----INGEDEQSCLAPPKCSQDEFQCH-HGKCIPISKRCDSVHDCV---- 393
Query: 322 VDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG-----PFC 376
DW + C N C S C+ K+C+ +C +G DE P C
Sbjct: 394 ------DWSDEMNCENHQCAANMKSC-LSGHCIEEHKWCNFHRECPDGSDEKDCDPRPVC 446
Query: 377 N-NKADCENLKC 387
N+ C+N +C
Sbjct: 447 EANQFRCKNGQC 458
>sp|Q700K0|SSPO_RAT SCO-spondin OS=Rattus norvegicus GN=Sspo PE=2 SV=1
Length = 5141
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 74/153 (48%), Gaps = 12/153 (7%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKC 224
C E C S CV L CD + DC +G DE + C GQ SC G+C+P S C
Sbjct: 1381 CAEGEALCRESGHCVPLEWLCDNQDDCGDGSDEEGCDTSVCGEGQMSCQSGRCLPLSLIC 1440
Query: 225 DGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW 284
DG DC DG+DE C+ C G + CA +C+P LCD DC +D DE+
Sbjct: 1441 DGQDDC-GDGTDE-QGCL--CPQGFLACA-DGRCLPPALLCDGHPDC-----LDAADEES 1490
Query: 285 -DKFHQCFNGQVQCALSKKCIPHNWLCDEEMDC 316
+ C +G+V C + CI LCD DC
Sbjct: 1491 CLGWVSCTSGEVSC-VDGPCIRTIQLCDGVWDC 1522
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 95/254 (37%), Gaps = 38/254 (14%)
Query: 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESW 222
LC L C + +C+ + CDG PDC + DE CT G+ SC G CI
Sbjct: 1456 LCPQGFLAC-ADGRCLPPALLCDGHPDCLDAADEESCLGWVSCTSGEVSCVDGPCIRTIQ 1514
Query: 223 KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 282
CDG DC DG+DE G V C+ P + S D
Sbjct: 1515 LCDGVWDC-PDGADE----------GPVHCSSPSLPTPPAGIGQNPSTSSPDTSPSPVGS 1563
Query: 283 DWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP 342
C + QC S +C P W CD E DC+ D +DE C
Sbjct: 1564 A-SPASPCSLSEFQCN-SGECTPRGWRCDREEDCT-----DGSDE------LDCGGPCKL 1610
Query: 343 NELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCENLKCSHKCSPTPRGAMCF 401
++ C C++ + CDG C +G DE P C ++ S P G
Sbjct: 1611 YQMPCAHGPHCLSPGQLCDGVAQCPDGSDEDPDVCEERSA----------SGGPNGTAVP 1660
Query: 402 CPAGQNPNKTQCVD 415
CP PN T C+D
Sbjct: 1661 CPEFSCPNGT-CID 1673
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 20/93 (21%)
Query: 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEG------------------PFCNAE 204
+ C P ++ C CV + CDG+ DC +G DE P A
Sbjct: 2390 MRCGPGQVPCDVLG-CVEQEQLCDGREDCLDGSDEQHCASPEPFTVPTTALPGLPASRAL 2448
Query: 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE 237
C+P Q SCG G+C+P +CD V+C +DGSDE
Sbjct: 2449 CSPSQLSCGSGECLPLEHRCDLQVNC-QDGSDE 2480
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 24/114 (21%)
Query: 199 PFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-----------PNTCIHQ--- 244
PF C PGQ C + C+ + CDG DCL DGSDE P T +
Sbjct: 2386 PFPLMRCGPGQVPCDVLGCVEQEQLCDGREDCL-DGSDEQHCASPEPFTVPTTALPGLPA 2444
Query: 245 ----CFNGQVQCALSKKCIPHNWLCDEEMDCS----TDDIVDNTDEDWDKFHQC 290
C Q+ C S +C+P CD +++C DD VD W + C
Sbjct: 2445 SRALCSPSQLSCG-SGECLPLEHRCDLQVNCQDGSDEDDCVDCVLAPWSGWSDC 2497
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 286 KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWD------KYFSHNA 337
+C GQV C + C+ LCD DC +D+ + E + +
Sbjct: 2388 PLMRCGPGQVPCDV-LGCVEQEQLCDGREDCLDGSDEQHCASPEPFTVPTTALPGLPASR 2446
Query: 338 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
LC P++L CGS +C+ L CD + +C +G DE
Sbjct: 2447 ALCSPSQLSCGS-GECLPLEHRCDLQVNCQDGSDE 2480
Score = 32.7 bits (73), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%)
Query: 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNAECTPG----------QFSCG 213
C ++ C C++ + CDG C +G DE P C G +FSC
Sbjct: 1608 CKLYQMPCAHGPHCLSPGQLCDGVAQCPDGSDEDPDVCEERSASGGPNGTAVPCPEFSCP 1667
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPN 239
G CI CDG DC EP+
Sbjct: 1668 NGTCIDFLLVCDGSPDCELADETEPS 1693
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 65.1 bits (157), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 329 WDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNG--EDEGPFCNNKADC-ENL 385
WD + C + C +CV L PDC G +G C + +C E L
Sbjct: 4668 WDDRNCRDVDECAWDAHLCREGQRCVNLLGSYRCLPDCGPGFRVADGAGCEDVDECLEGL 4727
Query: 386 KCSHK---CSPTPRGAMCFCPAG---QNPNKTQCVDADECL-IDGSCDQTCTNTHLSYVC 438
H C TP G C CP G Q P+ C+D +ECL + +C C N SY C
Sbjct: 4728 DDCHYNQLCENTPGGHRCSCPRGYRMQGPS-LPCLDVNECLQLPKACAYQCHNLQGSYRC 4786
Query: 439 SCTEGYTLRPDGKSCTAV 456
C G TL DGK+CT++
Sbjct: 4787 LCPPGQTLLRDGKACTSL 4804
Score = 62.4 bits (150), Expect = 7e-09, Method: Composition-based stats.
Identities = 84/345 (24%), Positives = 117/345 (33%), Gaps = 60/345 (17%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPGQFSCGMGKCIP 219
A+ NE+ C + + FC + +CS G C+ C PG+FSC
Sbjct: 4609 ALQAEENEVGCPEGFELDSQGAFCVDRDECSGGPSP---CSHACLNAPGRFSCTCPTGFA 4665
Query: 220 ESW---KCDGFVDCLEDGSDEPNTCIHQCFNGQ--VQCALSKKCIPHNWLCDEEMDCSTD 274
+W C +C D H C GQ V S +C+P DC
Sbjct: 4666 LAWDDRNCRDVDECAWDA--------HLCREGQRCVNLLGSYRCLP---------DCGPG 4708
Query: 275 -DIVDNTD-EDWDKFHQCFNGQVQCALSKKC--IPHNWLCD----EEMDCSTDDIVDNTD 326
+ D ED D +C G C ++ C P C M + +D +
Sbjct: 4709 FRVADGAGCEDVD---ECLEGLDDCHYNQLCENTPGGHRCSCPRGYRMQGPSLPCLDVNE 4765
Query: 327 ----EDWDKYFSHN-----AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 377
Y HN LC P + C +L + S+ P+
Sbjct: 4766 CLQLPKACAYQCHNLQGSYRCLCPPGQTLLRDGKACTSLERNGQNVTTVSHRGPLLPWLR 4825
Query: 378 NKADCENLKCSHKCSPTPRGAMC-------FCPAGQNPNKTQCVDADECLIDGSCDQTCT 430
A S P G M +CP G C D DEC + C C
Sbjct: 4826 PWASIPGTSYHAWVSLRP-GPMALSSVGRAWCPPGFIRQNGVCTDLDECRVRNLCQHACR 4884
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDE-----PASIIFSS 470
NT SY C C GY L P GK+C +N ++E P + F++
Sbjct: 4885 NTEGSYQCLCPAGYRLLPSGKNCQDINECEEESIECGPGQMCFNT 4929
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 11/88 (12%)
Query: 376 CNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQN--PNKTQCVDADEC---LIDGSCDQT 428
C + +C NL C H C T C CPAG P+ C D +EC I+ Q
Sbjct: 4867 CTDLDECRVRNL-CQHACRNTEGSYQCLCPAGYRLLPSGKNCQDINECEEESIECGPGQM 4925
Query: 429 CTNTHLSYVC---SCTEGYTLRPDGKSC 453
C NT SY C C Y P +C
Sbjct: 4926 CFNTRGSYQCVDTPCPATYRQGPSPGTC 4953
>sp|Q9Z319|CORIN_MOUSE Atrial natriuretic peptide-converting enzyme OS=Mus musculus
GN=Corin PE=2 SV=2
Length = 1113
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 96/221 (43%), Gaps = 43/221 (19%)
Query: 119 SPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVR-----VDGSHNA-VLCHPNELRC 172
S L N WP SL +D H T SVR + H LC E
Sbjct: 292 SVLGMVNSSWPDSLRCSQFRD-------HTETNSSVRKSCFSLQQEHGKQSLCGGGESFL 344
Query: 173 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLE 232
+S CV C+G DC + DE CN C+ F CG GKC+ S CDG+ DC
Sbjct: 345 CTSGLCVPKKLQCNGYNDCDDWSDEA-HCN--CSKDLFHCGTGKCLHYSLLCDGYDDC-G 400
Query: 233 DGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKF 287
D SDE N T H+C +G +CI W+CD + DC VD +DE
Sbjct: 401 DLSDEQNCDCNLTKEHRCGDG--------RCIAAEWVCDGDHDC-----VDKSDEVNCSC 447
Query: 288 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDED 328
H G V+C S +CIP + CD + DC D +DE+
Sbjct: 448 HS--QGLVECR-SGQCIPSTFQCDGDEDCK-----DGSDEE 480
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 16/124 (12%)
Query: 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNW 263
EC+P F C G+C+ S +CDG DC +D +E C + +C +K+C+ H
Sbjct: 647 ECSPSHFKCRSGRCVLGSRRCDGQADCDDDSDEENCGCKERAL---WECPFNKQCLKHTL 703
Query: 264 LCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVD 323
+CD DC D+ DE F C + +++CA + +C+P + CD +DCS D
Sbjct: 704 ICDGFPDCP-----DSMDEKNCSF--CQDNELECA-NHECVPRDLWCDGWVDCS-----D 750
Query: 324 NTDE 327
++DE
Sbjct: 751 SSDE 754
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 238 PNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQC 297
PN + +C +C S +C+ + CD + DC D++DE+ + +C
Sbjct: 641 PNEDVEECSPSHFKCR-SGRCVLGSRRCDGQADCD-----DDSDEENCGCKE--RALWEC 692
Query: 298 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALS 357
+K+C+ H +CD DC D+ DE N C NEL C ++++CV
Sbjct: 693 PFNKQCLKHTLICDGFPDCP-----DSMDEK-------NCSFCQDNELEC-ANHECVPRD 739
Query: 358 KFCDGKPDCSNGEDE 372
+CDG DCS+ DE
Sbjct: 740 LWCDGWVDCSDSSDE 754
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 84/226 (37%), Gaps = 52/226 (23%)
Query: 219 PESWKCDGFVDCLEDGSDEPNTCIHQ---------CFNGQVQCALSKKCIPHNWLCDEEM 269
P+S +C F D E S +C C G+ S C+P C+
Sbjct: 302 PDSLRCSQFRDHTETNSSVRKSCFSLQQEHGKQSLCGGGESFLCTSGLCVPKKLQCNGYN 361
Query: 270 DCSTDDIVDNTDEDW-DKFH-QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE 327
DC +DW D+ H C C + KC+ ++ LCD DC D+ D +
Sbjct: 362 DC----------DDWSDEAHCNCSKDLFHCG-TGKCLHYSLLCDGYDDCG--DLSDEQNC 408
Query: 328 DWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKC 387
D + H RCG +C+A CDG DC + DE N C
Sbjct: 409 DCNLTKEH----------RCGD-GRCIAAEWVCDGDHDCVDKSDE----------VNCSC 447
Query: 388 SHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTH 433
+ R C P+ QC D DE DGS ++ C+++
Sbjct: 448 HSQGLVECRSGQCI------PSTFQC-DGDEDCKDGSDEENCSDSQ 486
>sp|Q5HZW5|CD320_RAT CD320 antigen OS=Rattus norvegicus GN=Cd320 PE=2 SV=1
Length = 264
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 63/125 (50%), Gaps = 19/125 (15%)
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL---CDEEMDC 271
G C+P SW+CDG DC DGSDE I C A +++C P L CD C
Sbjct: 62 GYCVPLSWRCDGDRDC-SDGSDEEECRIEPC-------AQNRQCQPQPALPCSCDNISGC 113
Query: 272 STDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDED 328
S +D++ + C G+++C L CIPH W CD DC S+D++ +TD +
Sbjct: 114 SA-----GSDKNLNCSRSPCQEGELRCILDDVCIPHTWRCDGHPDCPDSSDELSCDTDTE 168
Query: 329 WDKYF 333
DK F
Sbjct: 169 TDKIF 173
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
V+V G A C + +C +S CV LS CDG DCS+G DE C E C
Sbjct: 41 VQVSGPR-AGSCPTDTFKCLTSGYCVPLSWRCDGDRDCSDGSDEEE-CRIEPCAQNRQCQ 98
Query: 214 MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQ-CFNGQVQCALSKKCIPHNWLCDEEMDC- 271
+P S CD C GSD+ C C G+++C L CIPH W CD DC
Sbjct: 99 PQPALPCS--CDNISGC-SAGSDKNLNCSRSPCQEGELRCILDDVCIPHTWRCDGHPDCP 155
Query: 272 -STDDIVDNTDEDWDKFHQ 289
S+D++ +TD + DK Q
Sbjct: 156 DSSDELSCDTDTETDKIFQ 174
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCI 304
C +C S C+P +W CD + DCS D +DE+ + C A +++C
Sbjct: 51 CPTDTFKCLTSGYCVPLSWRCDGDRDCS-----DGSDEEECRIEPC-------AQNRQCQ 98
Query: 305 PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKP 364
P L CS D+I DK + + C ELRC + C+ + CDG P
Sbjct: 99 PQPAL-----PCSCDNI-SGCSAGSDKNLNCSRSPCQEGELRCILDDVCIPHTWRCDGHP 152
Query: 365 DCSNGEDE 372
DC + DE
Sbjct: 153 DCPDSSDE 160
Score = 42.0 bits (97), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFK 49
C G+++C L CIPH W CD DC S+D++ +TD + DK F+
Sbjct: 128 CQEGELRCILDDVCIPHTWRCDGHPDCPDSSDELSCDTDTETDKIFQ 174
>sp|A4IHY6|LRAD3_XENTR Low-density lipoprotein receptor class A domain-containing protein
3 OS=Xenopus tropicalis GN=ldlrad3 PE=2 SV=1
Length = 337
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 74/142 (52%), Gaps = 14/142 (9%)
Query: 148 LNTVESVRVDGSHNAVLCH-PNELRCGSSNQCVALSKFCDGKPDCSNGEDEG--PFCNAE 204
L +VES + G+++ C+ P C S+ +C+ CDG PDC + DE P +
Sbjct: 8 LGSVESQLLPGNNHTTECNIPGNFMC-SNGRCIPGGWQCDGNPDCFDESDEKECPRARSR 66
Query: 205 CTPGQFSCGMG-KCIPESWKCDGFVDCLEDGSDEPNTCIHQ--CFNGQVQCALSKKCIPH 261
C P F C G CI ++C+GF DC DGSDE N H C N + C + CI
Sbjct: 67 CGPNFFPCTSGIHCIIARFQCNGFEDC-PDGSDEENCTAHPLLCSNSRFHCK-NHLCIDK 124
Query: 262 NWLCDEEMDCSTDDIVDNTDED 283
+++CD + +C +DN+DE+
Sbjct: 125 SFVCDGQNNC-----LDNSDEE 141
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 207 PGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN--TCIHQCFNGQVQCALSKKCIPHNWL 264
PG F C G+CIP W+CDG DC D SDE +C C CI +
Sbjct: 28 PGNFMCSNGRCIPGGWQCDGNPDCF-DESDEKECPRARSRCGPNFFPCTSGIHCIIARFQ 86
Query: 265 CDEEMDCSTDDIVDNTDEDWDKFHQ--CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
C+ DC D +DE+ H C N + C + CI +++CD + +C +
Sbjct: 87 CNGFEDCP-----DGSDEENCTAHPLLCSNSRFHCK-NHLCIDKSFVCDGQNNC-----L 135
Query: 323 DNTDED 328
DN+DE+
Sbjct: 136 DNSDEE 141
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 293 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQ 352
G C+ + +CIP W CD DC DE +K C PN C S
Sbjct: 29 GNFMCS-NGRCIPGGWQCDGNPDC--------FDESDEKECPRARSRCGPNFFPCTSGIH 79
Query: 353 CVALSKFCDGKPDCSNGEDE 372
C+ C+G DC +G DE
Sbjct: 80 CIIARFQCNGFEDCPDGSDE 99
>sp|O55058|FBLN4_CRIGR EGF-containing fibulin-like extracellular matrix protein 2
OS=Cricetulus griseus GN=EFEMP2 PE=2 SV=1
Length = 443
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 373 GPFCNNKADCENLKCSHKCSPTPRGAMCFCPAG--QNPNKTQCVDADECLIDGSCDQTCT 430
GP C + +C C H+C P C C G PN CVD +EC + C+Q C
Sbjct: 159 GPECVDIDECRYRYCQHRCVNLPGSFRCQCEPGFQLGPNNRSCVDVNECDMGAPCEQRCF 218
Query: 431 NTHLSYVCSCTEGYTLRPDGKSCTAVN 457
N++ +++C C +GY L DG SC+ ++
Sbjct: 219 NSYGTFLCRCNQGYELHRDGFSCSDID 245
>sp|Q9Z1P5|CD320_MOUSE CD320 antigen OS=Mus musculus GN=Cd320 PE=2 SV=1
Length = 260
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF-NGQVQCALSKKCIPHNWL---CDEEMD 270
G C+P SW+CDG DC DGSDE + I C NGQ C P + L CD
Sbjct: 58 GYCVPLSWRCDGDQDC-SDGSDEEDCRIESCAQNGQ--------CQPQSALPCSCDNISG 108
Query: 271 CSTDDIVDNTDEDWD-KFHQCFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDE 327
CS D +D++ + C ++ C L CIPH W CD DC S+D++ +TD
Sbjct: 109 CS-----DVSDKNLNCSRPPCQESELHCILDDVCIPHTWRCDGHPDCLDSSDELSCDTDT 163
Query: 328 DWDKYF 333
+ DK F
Sbjct: 164 EIDKIF 169
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 154 VRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCG 213
V+V GS A C + +C +S CV LS CDG DCS+G DE C E SC
Sbjct: 37 VQVSGSR-ADSCPTDTFQCLTSGYCVPLSWRCDGDQDCSDGSDEED-CRIE------SCA 88
Query: 214 M-GKCIPESW---KCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEM 269
G+C P+S CD C + N C ++ C L CIPH W CD
Sbjct: 89 QNGQCQPQSALPCSCDNISGCSDVSDKNLNCSRPPCQESELHCILDDVCIPHTWRCDGHP 148
Query: 270 DC--STDDIVDNTDEDWDKFHQ 289
DC S+D++ +TD + DK Q
Sbjct: 149 DCLDSSDELSCDTDTEIDKIFQ 170
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 20/129 (15%)
Query: 245 CFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCF-NGQVQCALSKKC 303
C QC S C+P +W CD + DCS D +DE+ + C NGQ C
Sbjct: 47 CPTDTFQCLTSGYCVPLSWRCDGDQDCS-----DGSDEEDCRIESCAQNGQ--------C 93
Query: 304 IPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGK 363
P + L CS D+I +D DK + + C +EL C + C+ + CDG
Sbjct: 94 QPQSAL-----PCSCDNISGCSDVS-DKNLNCSRPPCQESELHCILDDVCIPHTWRCDGH 147
Query: 364 PDCSNGEDE 372
PDC + DE
Sbjct: 148 PDCLDSSDE 156
Score = 38.9 bits (89), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 5 CFNGQVQCALSKKCIPHNWLCDEEMDC--STDDIVDNTDEDWDKYFK 49
C ++ C L CIPH W CD DC S+D++ +TD + DK F+
Sbjct: 124 CQESELHCILDDVCIPHTWRCDGHPDCLDSSDELSCDTDTEIDKIFQ 170
>sp|A2AJ76|HMCN2_MOUSE Hemicentin-2 OS=Mus musculus GN=Hmcn2 PE=1 SV=1
Length = 5100
Score = 60.5 bits (145), Expect = 3e-08, Method: Composition-based stats.
Identities = 77/321 (23%), Positives = 108/321 (33%), Gaps = 42/321 (13%)
Query: 162 AVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAEC--TPGQFSCGMGKCIP 219
A+ NE+ C + FC K +CS G C+ C PG FSC
Sbjct: 4643 ALQTEENEVGCPEGFEPDVQGAFCVDKDECSGGPSP---CSHTCRNAPGHFSCSCPTGFS 4699
Query: 220 ESW---------KCDGFVDCLEDGSDEPN-----TCIHQCFNGQVQCALSKKCIPHNWLC 265
+W +C G ++ N C+ C G A C + C
Sbjct: 4700 LAWDHRNCRDVDECAGNTHLCQEEQRCVNLLGSYNCLASCRPGFRVTADGSNCEDVDE-C 4758
Query: 266 DEEMD-CSTDDIVDNTDEDWDKFHQCF--NGQVQCALSKKCIPHNWLCDEEMDCSTDDIV 322
E++D C + + +NT H C G Q S C+ N C
Sbjct: 4759 LEQLDECHYNQLCENTPGG----HHCGCPRGYRQQGHSLPCLDINECLQLPTPCVYQ--C 4812
Query: 323 DNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADC 382
N + LC P + C+ L + S+ GP+ ++
Sbjct: 4813 QNLQGSY-------RCLCPPGQTLLRDGRTCIPLERNRQNITIVSHRSPFGPWLRSRVPR 4865
Query: 383 ENLKCSHKCSPTP-RGAM-----CFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSY 436
+ S P GA+ +CP G C D DEC + C C NT SY
Sbjct: 4866 PSSSYHTWVSLRPGSGALNSVGRAWCPPGFIRQDGVCADLDECRVRSLCQHACQNTEGSY 4925
Query: 437 VCSCTEGYTLRPDGKSCTAVN 457
C C GY L P GK+C +N
Sbjct: 4926 YCLCPSGYRLLPSGKNCQDIN 4946
Score = 38.1 bits (87), Expect = 0.16, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 8/97 (8%)
Query: 375 FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCVDADECLID-GSC--DQTCTN 431
C + C NL S+ C + R G N C D DECL C +Q C N
Sbjct: 4719 LCQEEQRCVNLLGSYNCLASCRPGFRVTADGSN-----CEDVDECLEQLDECHYNQLCEN 4773
Query: 432 THLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIF 468
T + C C GY + C +N P ++
Sbjct: 4774 TPGGHHCGCPRGYRQQGHSLPCLDINECLQLPTPCVY 4810
>sp|O75197|LRP5_HUMAN Low-density lipoprotein receptor-related protein 5 OS=Homo sapiens
GN=LRP5 PE=1 SV=2
Length = 1615
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 102/256 (39%), Gaps = 56/256 (21%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESV---------RV 156
+R+E + G NR L NI P L I LYW D +E V R+
Sbjct: 1134 KRIESCDLSGANRLTLEDANIVQPLGLTILGKH--LYWIDRQQQMIERVEKTTGDKRTRI 1191
Query: 157 DG--------------SHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
G S HP G S+ C+A DG P CS
Sbjct: 1192 QGRVAHLTGIHAVEEVSLEEFSAHPCARDNGGCSHICIAKG---DGTPRCSCPVHLVLLQ 1248
Query: 202 NA-------ECTPGQFSCGMGK--CIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQC 252
N C+P QF+C G+ CIP +W+CDGF +C +D SDE + C Q C
Sbjct: 1249 NLLTCGEPPTCSPDQFACATGEIDCIPGAWRCDGFPEC-DDQSDEEGCPV--CSAAQFPC 1305
Query: 253 ALSKKCIPHNWLCDEEMDCSTDDIVDNTDE-DWDKFHQCFNGQVQCALSKKCIPHNWLCD 311
A +C+ CD E DC D +DE D D C Q +CA S +C+ CD
Sbjct: 1306 A-RGQCVDLRLRCDGEADCQ-----DRSDEADCDAI--CLPNQFRCA-SGQCVLIKQQCD 1356
Query: 312 EEMDCSTDDIVDNTDE 327
DC +D +DE
Sbjct: 1357 SFPDC-----IDGSDE 1367
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 116/298 (38%), Gaps = 54/298 (18%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSH-----N 161
++E+A + G R L T + P +LV+D L+W D+ L +ES + G++ +
Sbjct: 1092 KIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANRLTLED 1151
Query: 162 AVLCHPNELRC-GSSNQCVALSKFCDGKPDCSNGEDE-----------GPFCNAECTPGQ 209
A + P L G + + + + + G+ G E + +
Sbjct: 1152 ANIVQPLGLTILGKHLYWIDRQQQMIERVEKTTGDKRTRIQGRVAHLTGIHAVEEVSLEE 1211
Query: 210 FSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIH--------------QCFNGQVQCALS 255
FS C ++ C DG+ + +H C Q CA
Sbjct: 1212 FSAH--PCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPDQFACATG 1269
Query: 256 K-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEM 314
+ CIP W CD +C D +DE+ C Q CA +C+ CD E
Sbjct: 1270 EIDCIPGAWRCDGFPECD-----DQSDEE--GCPVCSAAQFPCA-RGQCVDLRLRCDGEA 1321
Query: 315 DCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE 372
DC D D D D +C PN+ RC +S QCV + + CD PDC +G DE
Sbjct: 1322 DCQ--DRSDEADCD---------AICLPNQFRC-ASGQCVLIKQQCDSFPDCIDGSDE 1367
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHN----- 161
R+E+AGM G R +V +I WP+ L ID + LYW D+ L+ + +DGS
Sbjct: 175 RIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSFIHRANLDGSFRQKVVE 234
Query: 162 AVLCHPNEL 170
L HP L
Sbjct: 235 GSLTHPFAL 243
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC 165
++E A + G+ R LV ++ WP+ L +D + LYW D+ + +E + VDG+ L
Sbjct: 483 KIECANLDGQERRVLVNASLGWPNGLALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLL 541
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC-- 165
+ +A M+G + +V + +P + +D+ LYW D+ N +E R+DG VL
Sbjct: 699 ISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGKNLYWADTGTNRIEVARLDGQFRQVLVWR 758
Query: 166 ---HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFC 201
+P L + + +++ GKP +G C
Sbjct: 759 DLDNPRSLALDPTKGYIYWTEW-GGKPRIVRAFMDGTNC 796
Score = 37.4 bits (85), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 108 LEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHP 167
+ +A + G LV I P + +D+ LYW D+ + +E R++G+ +L
Sbjct: 397 IRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILVSE 456
Query: 168 --NELRCGSSNQCVALSKFCD----GKPDCSN--GEDEGPFCNA 203
+E R + + + L + D K +C+N G++ NA
Sbjct: 457 DLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNA 500
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 48/131 (36%), Gaps = 10/131 (7%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLC- 165
R+ +A M G N LV K + + L IDY LYW D N +ES + G V+
Sbjct: 785 RIVRAFMDGTNCMTLVDK-VGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERVVIAD 843
Query: 166 ---HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESW 222
HP L Q + D D+ N G M + S
Sbjct: 844 DLPHPFGL-----TQYSDYIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSS 898
Query: 223 KCDGFVDCLED 233
+ DG DC+ +
Sbjct: 899 RQDGLNDCMHN 909
Score = 33.5 bits (75), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 107 RLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCD-SHLNTVESVRVDGSHNAVLC 165
R+E A ++G +R L +++ P ++ +D +YW D +E +DGS ++
Sbjct: 131 RIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAGMDGSTRKIIV 190
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLN-TVESVRVDGSHNAVL 164
+R+E ++G +R LV++++ P ++ + ++YW D N +E +DG VL
Sbjct: 438 DRIEVTRLNGTSRKILVSEDLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVL 497
Query: 165 CH 166
+
Sbjct: 498 VN 499
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.465
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 204,402,108
Number of Sequences: 539616
Number of extensions: 9406504
Number of successful extensions: 26247
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 368
Number of HSP's that attempted gapping in prelim test: 18352
Number of HSP's gapped (non-prelim): 4154
length of query: 482
length of database: 191,569,459
effective HSP length: 121
effective length of query: 361
effective length of database: 126,275,923
effective search space: 45585608203
effective search space used: 45585608203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)