Query psy14262
Match_columns 482
No_of_seqs 447 out of 2860
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 23:31:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n7d_A LDL receptor, low-densi 100.0 2.4E-65 8.2E-70 567.1 28.5 371 3-481 4-395 (699)
2 3m0c_C LDL receptor, low-densi 100.0 4.9E-65 1.7E-69 569.1 9.7 373 3-481 22-413 (791)
3 1n7d_A LDL receptor, low-densi 100.0 2E-51 7E-56 455.5 24.9 310 119-460 9-338 (699)
4 3m0c_C LDL receptor, low-densi 100.0 1.1E-50 3.7E-55 453.3 7.2 311 118-460 26-356 (791)
5 2fyj_A Low-density lipoprotein 99.8 1.8E-19 6.1E-24 144.6 8.5 76 163-241 3-81 (82)
6 2fcw_B LDL receptor, low-densi 99.8 1.5E-19 5.2E-24 144.1 3.4 74 164-240 2-78 (80)
7 2fyj_A Low-density lipoprotein 99.8 1.2E-18 4.2E-23 139.7 8.3 77 203-286 3-81 (82)
8 2fcw_B LDL receptor, low-densi 99.7 6.9E-19 2.4E-23 140.3 4.5 75 204-285 2-78 (80)
9 3p5b_L Low density lipoprotein 99.4 6.3E-14 2.2E-18 144.9 6.0 97 381-481 2-101 (400)
10 3v65_B Low-density lipoprotein 99.4 1.8E-13 6.2E-18 140.7 5.8 97 381-481 5-105 (386)
11 2xrc_A Human complement factor 99.3 2.3E-12 7.8E-17 139.1 6.1 106 115-241 170-276 (565)
12 2gtl_O Extracellular hemoglobi 99.2 2.9E-14 1E-18 133.0 -8.9 115 187-329 39-170 (215)
13 2gtl_O Extracellular hemoglobi 99.2 1.3E-13 4.3E-18 128.8 -4.7 128 136-298 39-184 (215)
14 2xrc_A Human complement factor 99.2 6.6E-12 2.3E-16 135.5 4.9 102 169-286 175-276 (565)
15 2w2n_E LDL receptor, low-densi 99.2 3.8E-12 1.3E-16 107.2 1.8 85 368-454 20-107 (107)
16 1z6c_A Vitamin K-dependent pro 99.1 3.2E-11 1.1E-15 97.6 4.6 76 381-457 5-87 (87)
17 2vj3_A Neurogenic locus notch 99.1 7.9E-11 2.7E-15 103.2 7.3 116 339-468 7-132 (135)
18 2bou_A EGF-like module contain 99.1 2E-11 6.9E-16 108.0 3.4 109 346-459 8-142 (143)
19 2kny_A LRP-1, linker, APO-E; l 99.1 1.7E-11 5.8E-16 97.3 1.5 66 159-224 3-74 (80)
20 1x7a_L Coagulation factor IX, 99.1 3.8E-11 1.3E-15 106.8 2.9 78 381-460 50-131 (146)
21 1lmj_A Fibrillin 1; EGF, calci 99.1 7.7E-11 2.6E-15 95.1 4.1 74 381-454 5-86 (86)
22 1d2l_A Lipoprotein receptor re 99.0 1.1E-10 3.8E-15 82.0 3.6 38 2-45 3-40 (45)
23 1ajj_A LR5, low-density lipopr 99.0 1.1E-10 3.9E-15 78.6 3.4 36 4-45 1-36 (37)
24 1cr8_A Protein (LOW density li 99.0 1.4E-10 4.7E-15 80.5 3.9 39 3-46 2-40 (42)
25 2jm4_A Relaxin receptor 1; LDL 99.0 1.5E-10 5.1E-15 80.7 3.7 39 2-45 4-42 (43)
26 1emn_A Fibrillin; extracellula 99.0 2.7E-10 9.4E-15 91.0 5.2 72 381-453 7-81 (82)
27 2m0p_A Low-density lipoprotein 99.0 1E-10 3.5E-15 84.4 2.0 40 3-48 5-44 (52)
28 3a7q_B Low-density lipoprotein 99.0 1.7E-10 5.9E-15 80.8 3.1 38 2-45 5-42 (44)
29 1aut_L Activated protein C; se 99.0 3E-10 1E-14 96.6 4.6 66 390-457 27-96 (114)
30 2knx_A Prolow-density lipoprot 99.0 3.3E-10 1.1E-14 81.5 3.4 39 2-45 4-42 (50)
31 1k7b_A Subgroup A ROUS sarcoma 98.9 3.1E-10 1.1E-14 80.7 3.2 38 3-45 5-46 (47)
32 1j8e_A Low-density lipoprotein 98.9 3.8E-10 1.3E-14 79.1 3.0 38 2-45 2-39 (44)
33 1nfu_B Coagulation factor XA, 98.9 2.8E-10 9.5E-15 105.8 2.8 75 381-457 44-123 (195)
34 1cr8_A Protein (LOW density li 98.9 8.8E-10 3E-14 76.4 4.2 38 164-202 3-40 (42)
35 3dpr_E LDL-receptor class A 3; 98.9 5.6E-10 1.9E-14 76.1 2.8 36 5-45 1-37 (39)
36 1jrf_A TVA LDL-A module, subgr 98.9 4.7E-10 1.6E-14 79.8 2.3 40 2-46 2-45 (47)
37 2vh0_B Activated factor XA lig 98.9 9E-10 3.1E-14 96.4 4.1 75 381-457 44-123 (134)
38 1ajj_A LR5, low-density lipopr 98.9 9.6E-10 3.3E-14 74.1 3.3 34 165-199 2-35 (37)
39 1dx5_I Thrombomodulin; serine 98.9 1.8E-10 6.3E-15 98.5 -0.5 99 346-453 11-118 (118)
40 2c4f_L Coagulation factor VII 98.9 1.1E-09 3.8E-14 96.8 4.2 81 381-463 49-139 (142)
41 2i1p_A Low-density lipoprotein 98.9 6.6E-10 2.3E-14 79.3 2.1 38 3-46 5-43 (48)
42 2i1p_A Low-density lipoprotein 98.9 5.2E-10 1.8E-14 79.9 1.6 42 159-202 2-43 (48)
43 2kny_A LRP-1, linker, APO-E; l 98.9 7E-10 2.4E-14 87.9 2.4 61 203-265 7-74 (80)
44 3dpr_E LDL-receptor class A 3; 98.8 2E-09 6.9E-14 73.3 3.5 37 165-202 1-38 (39)
45 1d2l_A Lipoprotein receptor re 98.8 2E-09 6.9E-14 75.6 3.6 36 163-199 4-39 (45)
46 1z1y_A Ookinete surface protei 98.8 1.7E-10 5.8E-15 106.6 -3.0 139 296-452 12-176 (186)
47 2knx_A Prolow-density lipoprot 98.8 2.2E-09 7.4E-14 77.2 3.4 42 163-207 5-47 (50)
48 2jm4_A Relaxin receptor 1; LDL 98.8 3.2E-09 1.1E-13 73.9 4.1 37 163-199 5-41 (43)
49 3a7q_B Low-density lipoprotein 98.8 3E-09 1E-13 74.5 3.7 35 205-240 8-42 (44)
50 2m0p_A Low-density lipoprotein 98.8 1.2E-09 4.2E-14 78.7 1.3 36 163-199 5-40 (52)
51 3h5c_B Vitamin K-dependent pro 98.7 1.7E-08 5.7E-13 100.7 8.3 78 381-460 7-89 (317)
52 1k7b_A Subgroup A ROUS sarcoma 98.7 5E-09 1.7E-13 74.4 3.1 37 163-199 5-45 (47)
53 4d90_A EGF-like repeat and dis 98.7 1.3E-08 4.3E-13 89.6 5.8 99 346-456 7-134 (143)
54 1kli_L Factor VIIA; extrinsic 98.7 1.4E-08 4.6E-13 78.3 4.6 49 414-462 3-53 (69)
55 2jkh_L Factor X light chain; p 98.7 1.3E-08 4.5E-13 74.8 4.3 47 417-463 2-49 (55)
56 1j8e_A Low-density lipoprotein 98.6 8.4E-09 2.9E-13 72.2 1.8 35 204-239 4-38 (44)
57 3v64_C Agrin; beta propeller, 98.6 2.9E-08 1E-12 100.3 5.8 62 416-481 1-62 (349)
58 2w86_A Fibrillin-1, fibrillin1 98.6 1.3E-08 4.4E-13 90.2 2.5 106 344-454 9-147 (147)
59 1jrf_A TVA LDL-A module, subgr 98.6 1E-08 3.5E-13 72.8 1.4 35 205-240 5-44 (47)
60 1uzk_A Fibrillin-1; glycoprote 98.6 1.2E-08 4.2E-13 91.9 2.0 103 346-454 11-162 (162)
61 1z1y_A Ookinete surface protei 98.6 5.1E-09 1.7E-13 96.6 -1.3 109 344-460 10-143 (186)
62 1yo8_A Thrombospondin-2; EGF, 98.6 1.1E-07 3.8E-12 102.7 8.8 111 345-461 9-155 (634)
63 1dx5_I Thrombomodulin; serine 98.5 6.5E-09 2.2E-13 88.9 -1.0 78 381-463 6-88 (118)
64 1kig_L Factor XA; glycoprotein 98.5 6.9E-08 2.4E-12 69.7 3.5 41 421-461 4-44 (51)
65 1yo8_A Thrombospondin-2; EGF, 98.5 1.5E-07 5.2E-12 101.6 7.7 82 381-462 5-108 (634)
66 2vj3_A Neurogenic locus notch 98.5 1.9E-07 6.5E-12 81.4 6.6 76 381-463 7-90 (135)
67 2bz6_L Blood coagulation facto 98.5 1.1E-07 3.9E-12 69.2 4.2 41 421-461 5-46 (53)
68 2gtl_N Extracellular hemoglobi 98.4 2E-07 6.9E-12 86.3 4.2 57 163-220 51-114 (220)
69 1tpg_A T-plasminogen activator 98.3 5E-07 1.7E-11 73.4 5.4 79 365-458 5-90 (91)
70 4d90_A EGF-like repeat and dis 98.2 1E-06 3.5E-11 77.2 5.9 76 381-463 2-104 (143)
71 1apq_A Complement protease C1R 98.2 1.1E-06 3.6E-11 63.7 4.6 42 414-455 2-52 (53)
72 2gtl_M Hemoglobin linker chain 98.2 4.7E-07 1.6E-11 84.5 3.4 40 2-46 51-93 (217)
73 2gtl_N Extracellular hemoglobi 98.2 8.9E-07 3E-11 82.0 4.6 55 204-260 52-113 (220)
74 1uzk_A Fibrillin-1; glycoprote 98.2 1.1E-07 3.7E-12 85.6 -1.7 82 381-462 5-128 (162)
75 2bou_A EGF-like module contain 98.2 1.1E-06 3.8E-11 77.2 4.5 69 390-461 14-101 (143)
76 2wph_E Coagulation factor IXA 98.1 2E-06 6.8E-11 64.0 4.3 38 421-458 5-43 (59)
77 2gtl_M Hemoglobin linker chain 98.1 1.6E-06 5.6E-11 80.8 3.6 37 162-198 51-88 (217)
78 2ygq_A WIF-1, WNT inhibitory f 98.0 6.5E-06 2.2E-10 82.4 6.9 152 251-456 154-309 (324)
79 1emn_A Fibrillin; extracellula 97.9 5.8E-06 2E-10 65.6 3.3 50 412-463 1-52 (82)
80 4a0p_A LRP6, LRP-6, low-densit 97.8 1.5E-05 5.1E-10 86.9 6.4 61 415-481 264-326 (628)
81 2vj2_A Jagged-1; signalling, p 97.8 8.7E-06 3E-10 73.7 3.0 87 348-453 75-167 (169)
82 1lmj_A Fibrillin 1; EGF, calci 97.8 9.4E-06 3.2E-10 64.9 2.5 49 415-463 2-53 (86)
83 2w2n_E LDL receptor, low-densi 97.8 1.4E-05 4.7E-10 66.8 3.6 55 403-461 19-74 (107)
84 3ojy_B Complement component C8 97.6 3.1E-05 1.1E-09 82.6 4.8 46 208-260 69-115 (537)
85 3ojy_B Complement component C8 97.6 3.7E-05 1.3E-09 82.0 5.3 46 168-219 69-115 (537)
86 1z6c_A Vitamin K-dependent pro 97.6 2.9E-05 1E-09 62.2 3.3 71 340-416 6-86 (87)
87 2jkh_L Factor X light chain; p 97.6 1.4E-05 4.7E-10 58.5 0.5 40 381-420 3-46 (55)
88 3ojy_A Complement component C8 97.5 3.8E-05 1.3E-09 82.1 3.9 35 205-241 66-101 (554)
89 1x7a_L Coagulation factor IX, 97.5 5E-05 1.7E-09 67.0 3.8 70 345-419 54-130 (146)
90 2wph_E Coagulation factor IXA 97.5 3.4E-05 1.2E-09 57.2 1.5 46 384-433 6-54 (59)
91 1kig_L Factor XA; glycoprotein 97.4 4.7E-05 1.6E-09 54.7 2.2 37 384-420 5-43 (51)
92 3ojy_A Complement component C8 97.4 7.9E-05 2.7E-09 79.7 4.1 54 164-221 65-119 (554)
93 3s94_A LRP-6, low-density lipo 97.3 0.00021 7.2E-09 77.6 6.5 61 416-481 272-335 (619)
94 1kli_L Factor VIIA; extrinsic 97.3 4.8E-05 1.7E-09 58.2 0.6 40 381-420 7-51 (69)
95 1szb_A Mannose binding lectin- 97.2 0.00028 9.7E-09 63.5 4.8 46 412-457 120-169 (170)
96 2bz6_L Blood coagulation facto 97.2 7.4E-05 2.5E-09 54.1 0.4 37 384-420 6-45 (53)
97 2ygq_A WIF-1, WNT inhibitory f 97.1 0.00053 1.8E-08 68.4 6.7 147 215-414 159-307 (324)
98 3v65_B Low-density lipoprotein 97.1 7.1E-05 2.4E-09 76.3 0.0 46 415-460 2-48 (386)
99 3h5c_B Vitamin K-dependent pro 97.1 0.00049 1.7E-08 68.1 6.1 71 345-420 11-89 (317)
100 3p5b_L Low density lipoprotein 97.1 0.00035 1.2E-08 71.6 4.9 44 417-461 1-45 (400)
101 1aut_L Activated protein C; se 97.1 0.00015 5E-09 61.1 1.5 68 346-418 21-97 (114)
102 3f1s_B Vitamin K-dependent pro 97.0 0.00031 1.1E-08 68.5 3.8 46 416-461 2-49 (283)
103 2kl7_A Fibulin-4; secreted, ca 97.0 0.00056 1.9E-08 52.5 4.1 26 381-406 5-35 (71)
104 2c4f_L Coagulation factor VII 97.0 0.00025 8.7E-09 62.0 2.4 68 345-418 53-132 (142)
105 2vh0_B Activated factor XA lig 96.9 0.00017 5.9E-09 62.5 0.1 68 346-418 49-124 (134)
106 1tpg_A T-plasminogen activator 96.8 0.00036 1.2E-08 56.3 1.9 53 397-463 1-55 (91)
107 1nfu_B Coagulation factor XA, 96.8 0.0002 6.9E-09 66.2 0.1 68 345-417 48-123 (195)
108 1nzi_A Complement C1S componen 96.6 0.0015 5.2E-08 57.8 4.4 43 413-455 114-158 (159)
109 4fbr_A Lectin, myxobacterial h 96.3 5.5E-05 1.9E-09 73.0 -7.4 130 294-458 37-206 (267)
110 3t5o_A Complement component C6 96.2 0.0017 5.9E-08 73.6 2.8 34 8-47 121-154 (913)
111 1apq_A Complement protease C1R 96.1 0.0016 5.5E-08 46.5 1.1 30 385-414 20-51 (53)
112 2w86_A Fibrillin-1, fibrillin1 96.0 0.0052 1.8E-07 53.7 4.6 42 415-457 3-45 (147)
113 1edm_B Factor IX; epidermal gr 95.8 0.0076 2.6E-07 40.1 3.6 34 415-453 2-37 (39)
114 3fcs_B Integrin beta-3; beta p 95.7 0.0087 3E-07 65.4 5.3 83 345-445 493-594 (690)
115 2k2s_B Micronemal protein 6; m 95.5 0.0034 1.2E-07 46.6 1.0 42 412-457 7-52 (61)
116 1gl4_A Nidogen-1, entactin; im 95.5 0.0052 1.8E-07 59.7 2.4 43 414-458 3-48 (285)
117 1ijq_A LDL receptor, low-densi 95.5 0.0092 3.2E-07 58.6 4.3 40 415-454 266-315 (316)
118 3t5o_A Complement component C6 95.5 0.0075 2.6E-07 68.3 4.0 34 208-242 121-154 (913)
119 2vj2_A Jagged-1; signalling, p 95.3 0.0039 1.3E-07 56.0 0.8 105 278-413 56-167 (169)
120 3sov_A LRP-6, low-density lipo 94.9 0.014 4.9E-07 57.6 3.5 42 416-457 267-311 (318)
121 4fbr_A Lectin, myxobacterial h 94.6 0.00087 3E-08 64.6 -5.7 94 345-458 38-139 (267)
122 3s94_A LRP-6, low-density lipo 94.4 0.019 6.6E-07 62.1 3.5 54 106-159 150-203 (619)
123 1edm_B Factor IX; epidermal gr 94.2 0.012 4.2E-07 39.0 0.8 32 381-414 5-38 (39)
124 3u7u_G Neuregulin 1; signaling 94.0 0.047 1.6E-06 39.5 3.6 36 414-454 6-48 (55)
125 3fcs_B Integrin beta-3; beta p 93.8 0.044 1.5E-06 59.9 4.7 92 296-415 494-600 (690)
126 1egf_A Epidermal growth factor 93.2 0.069 2.4E-06 38.1 3.4 37 415-455 2-44 (53)
127 3u7u_G Neuregulin 1; signaling 93.2 0.029 1E-06 40.6 1.4 32 381-414 10-48 (55)
128 2gy5_A Angiopoietin-1 receptor 92.9 0.12 4E-06 53.3 6.0 94 346-455 204-320 (423)
129 2k2s_B Micronemal protein 6; m 92.9 0.0088 3E-07 44.3 -1.8 38 381-420 13-55 (61)
130 3v64_C Agrin; beta propeller, 91.8 0.059 2E-06 53.7 2.0 38 381-418 3-43 (349)
131 1a3p_A Epidermal growth factor 91.5 0.2 7E-06 34.2 4.0 27 424-454 10-40 (45)
132 1hae_A Heregulin-alpha; growth 91.4 0.15 5.1E-06 37.6 3.4 39 418-461 8-54 (63)
133 1egf_A Epidermal growth factor 90.9 0.11 3.8E-06 36.9 2.2 33 381-415 5-44 (53)
134 3f1s_B Vitamin K-dependent pro 90.9 0.16 5.3E-06 49.1 4.0 40 381-420 4-48 (283)
135 1g1s_A P-selectin; selectin, l 90.8 0.14 4.7E-06 44.9 3.3 35 423-461 125-161 (162)
136 1a3p_A Epidermal growth factor 90.3 0.11 3.8E-06 35.6 1.7 27 386-414 10-40 (45)
137 1hae_A Heregulin-alpha; growth 90.2 0.043 1.5E-06 40.6 -0.5 38 381-420 8-53 (63)
138 2gy5_A Angiopoietin-1 receptor 90.2 0.19 6.6E-06 51.7 4.1 55 390-454 210-277 (423)
139 1k36_A Epiregulin; EGF-like fo 89.7 0.24 8.1E-06 34.2 3.0 37 415-455 2-43 (46)
140 3k6s_B Integrin beta-2; cell r 89.5 0.14 4.6E-06 56.0 2.4 88 345-454 482-591 (687)
141 1g1s_A P-selectin; selectin, l 88.6 0.072 2.5E-06 46.8 -0.5 38 381-420 121-160 (162)
142 1szb_A Mannose binding lectin- 87.9 0.14 4.8E-06 45.5 1.0 30 387-416 137-168 (170)
143 2kl7_A Fibulin-4; secreted, ca 87.9 0.18 6.2E-06 38.3 1.5 40 415-455 2-71 (71)
144 1gl4_A Nidogen-1, entactin; im 87.4 0.086 2.9E-06 51.1 -0.7 40 381-420 7-50 (285)
145 2wg3_C Hedgehog-interacting pr 87.4 0.12 4E-06 54.0 0.2 75 365-457 380-457 (463)
146 1n1i_A Merozoite surface prote 87.2 0.35 1.2E-05 39.4 2.9 66 390-455 23-95 (105)
147 3ca7_A Protein spitz; argos, E 86.7 0.11 3.8E-06 36.9 -0.4 41 398-454 3-47 (52)
148 1k36_A Epiregulin; EGF-like fo 85.4 0.19 6.4E-06 34.8 0.3 28 385-414 12-42 (46)
149 1ob1_C Major merozoite surface 83.8 0.47 1.6E-05 38.3 2.0 56 390-445 17-83 (99)
150 4a0p_A LRP6, LRP-6, low-densit 83.1 0.73 2.5E-05 49.8 3.9 53 106-159 146-198 (628)
151 1nzi_A Complement C1S componen 80.4 0.49 1.7E-05 41.2 1.1 31 385-415 126-158 (159)
152 3k6s_B Integrin beta-2; cell r 80.3 0.76 2.6E-05 50.1 2.7 61 345-419 525-596 (687)
153 3sov_A LRP-6, low-density lipo 80.0 0.52 1.8E-05 46.2 1.2 37 381-417 269-311 (318)
154 1nt0_A MAsp2, mannose-binding 77.5 1.6 5.3E-05 42.0 3.8 32 423-454 131-162 (286)
155 1ijq_A LDL receptor, low-densi 77.2 1 3.4E-05 43.8 2.3 31 384-414 277-315 (316)
156 1nql_B Epidermal growth factor 76.0 1.5 5E-05 31.1 2.3 29 423-455 12-44 (53)
157 3dem_A Complement factor MAsp- 75.6 1.9 6.7E-05 41.0 3.9 32 423-454 132-163 (278)
158 1nql_B Epidermal growth factor 73.7 0.62 2.1E-05 33.1 -0.2 28 385-414 12-43 (53)
159 3cfw_A L-selectin; EGF, cell a 60.5 5.3 0.00018 34.5 3.1 34 423-460 125-160 (164)
160 2wg3_C Hedgehog-interacting pr 59.6 1.6 5.6E-05 45.2 -0.5 56 346-415 398-455 (463)
161 4aqs_A Laminin subunit beta-1; 56.0 5.8 0.0002 41.6 3.0 50 397-454 459-524 (525)
162 3cfw_A L-selectin; EGF, cell a 54.4 2.4 8.2E-05 36.8 -0.3 35 384-420 124-160 (164)
163 2p28_B Integrin beta-2; hybrid 49.9 6.1 0.00021 36.5 1.7 49 398-454 154-213 (217)
164 1q4g_A Prostaglandin G/H synth 49.4 3.7 0.00013 43.5 0.2 32 381-414 4-39 (553)
165 1q4g_A Prostaglandin G/H synth 48.0 11 0.00038 39.8 3.6 34 416-454 2-39 (553)
166 3ltf_D Protein spitz; receptor 43.0 12 0.00041 26.8 2.0 27 427-457 20-50 (58)
167 3nt1_A Prostaglandin-endoperox 39.7 20 0.00067 38.2 3.9 35 416-455 1-39 (587)
168 3nt1_A Prostaglandin-endoperox 37.6 7.4 0.00025 41.5 0.2 32 381-414 3-38 (587)
169 2fd6_A Urokinase-type plasmino 29.7 28 0.00096 28.8 2.5 56 346-415 2-63 (122)
170 4aqb_A Mannan-binding lectin s 28.3 45 0.0015 32.6 4.2 33 422-454 131-163 (361)
171 1iox_A Betacellulin; EGF-like 26.7 46 0.0016 22.9 2.8 21 431-455 25-45 (50)
172 3e50_C Protransforming growth 24.3 57 0.002 22.6 2.9 25 428-456 20-46 (50)
173 1g1t_A E-selectin; EGF, adhesi 24.2 9.9 0.00034 32.4 -1.4 24 427-454 131-154 (157)
174 1xdt_R Hbegf, heparin-binding 24.0 21 0.0007 27.5 0.6 10 397-406 61-70 (79)
175 1g1t_A E-selectin; EGF, adhesi 22.7 42 0.0014 28.2 2.4 31 381-413 121-153 (157)
176 2rnl_A Amphiregulin; AR, color 20.3 88 0.003 21.5 3.2 18 428-445 24-43 (50)
No 1
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=2.4e-65 Score=567.09 Aligned_cols=371 Identities=33% Similarity=0.729 Sum_probs=292.5
Q ss_pred cccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCccc--ccccceeccCcccccceeccCCCceeeecccccccc
Q psy14262 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDW--DKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSV 80 (482)
Q Consensus 3 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~--~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~ 80 (482)
+.|.++||+|. ||+|||..|+|||++||+ |+|||.. |...
T Consensus 4 ~~C~~~~f~C~-~g~ci~~~~~Cdg~~dC~-----d~sDE~~~~C~~~-------------------------------- 45 (699)
T 1n7d_A 4 DRCERNEFQCQ-DGKCISYKWVCDGSAECQ-----DGSDESQETCLSV-------------------------------- 45 (699)
T ss_dssp ----------------------------------------------CC--------------------------------
T ss_pred CCCCccceeCC-CCcEEcHHhcCCCcccCC-----CCCCCCccccCCc--------------------------------
Confidence 57999999998 899999999999999998 9999975 3110
Q ss_pred cccccccccCCCCCCCCCCCCCChhhhhhhccCCCCCCcceeeCC---ceecCceeeCCCCCCCcccCCCCCCccccccC
Q psy14262 81 RLRCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTKN---IQWPSSLVIDYNQDILYWCDSHLNTVESVRVD 157 (482)
Q Consensus 81 ~~~c~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~ 157 (482)
.| ....|.|.+ +|||..|+|||..||.| ||||.
T Consensus 46 --~C--------------------------------~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~d------gsDE~---- 81 (699)
T 1n7d_A 46 --TC--------------------------------KSGDFSCGGRVNRCIPQFWRCDGQVDCDN------GSDEQ---- 81 (699)
T ss_dssp --SC--------------------------------SSSSCCCCC--CCCCCSSSTTSSSCCC-C------CCTTT----
T ss_pred --CC--------------------------------CCCccCCCCCCCceeCcceecCCcccCCC------CcccC----
Confidence 01 001244433 79999999999999999 99998
Q ss_pred CCCCCccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCCCCC-CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCC
Q psy14262 158 GSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSD 236 (482)
Q Consensus 158 ~~c~~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~-~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsD 236 (482)
+|...+|.+.+|+|.++ +||+.+|+|||..||.|||||.+ |. ..|.+.+|+|.+|+||+..|+|||..|| .||||
T Consensus 82 -~C~~~~C~~~~f~C~~g-~Ci~~~~~Cdg~~dC~dgsDE~~-C~~~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC-~dgsD 157 (699)
T 1n7d_A 82 -GCPPKTCSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEAS-CPVLTCGPASFQCNSSTCIPQLWACDNDPDC-EDGSD 157 (699)
T ss_dssp -SCSSCCCCSSCCCSSCC-----CCCTTCSSCCSSSSCSSSS-CCCCCCCSSCCCCSSSCCCCTTSTTCSSCCS-SSSSS
T ss_pred -cccccccccCcEEcCCC-CEecHHHcCCCcCcCCCCCccCC-cCccccCccccCCCCCcccchhcccCCCCcC-CCCcc
Confidence 89888899999999987 89999999999999999999998 97 5799999999999999999999999999 99999
Q ss_pred C--CCccc--------ccccCCccccCCCCceecCCCccCccCCCCCCCCCCCCCCCCCCCccccCcccccCCCCccCCC
Q psy14262 237 E--PNTCI--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPH 306 (482)
Q Consensus 237 E--~~C~~--------~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE~~C~~~~C~~~~f~C~~g~~Ci~~ 306 (482)
| .+|.. ..|...+|+|. +|.||+..|+|||..||. ||+||.+|....|.+.+|+|.++ +||+.
T Consensus 158 E~~~~C~~~~~~~~~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~-----dgsDE~~C~~~~C~~~~f~C~~g-~Ci~~ 230 (699)
T 1n7d_A 158 EWPQRCRGLYVFQGDSSPCSAFEFHCL-SGECIHSSWRCDGGPDCK-----DKSDEENCAVATCRPDEFQCSDG-NCIHG 230 (699)
T ss_dssp SSCSSSSCCCCCSSCCCCSCSSSCCCS-SSCCCSTTCTTSSSCCST-----TSCSSCSCCCCCCCSSEEESSSS-CEEET
T ss_pred cccccCCCcccccCCCCCCCCcceecC-CCceEechhccCCCCCCC-----CCcccccCCCcccCCCcEecCCC-ceeee
Confidence 9 88953 46999999999 889999999999999999 99999999878899999999976 99999
Q ss_pred CCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccc-cCCCcccCCCCcccccccccCCCCCCCCCCCCCC-CCCCCCCcc-
Q psy14262 307 NWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP-FCNNKADCE- 383 (482)
Q Consensus 307 ~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C-~~~~f~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~-~C~~~~~C~- 383 (482)
+|+|||+.||. ||+||.+ |.. ...| .+.+|+|.++ .||+..++||+..+|.+|+||.. .|.++ +|.
T Consensus 231 ~~~Cdg~~dC~-----dgsde~~---C~~-~~~C~~~~~~~C~~g-~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~-eC~~ 299 (699)
T 1n7d_A 231 SRQCDREYDCK-----DMSDEVG---CVN-VTLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDEPIKECGTN-ECLD 299 (699)
T ss_dssp TCCSSSCCCSS-----SSCSSSS---TTC-CCCCCSTTCCCCTTS-CCCCSSCCSCSSCCSSSSCSCCCSSCCCC-CTTS
T ss_pred ecccCCCCCCC-----CCCccCC---CCC-CCcccCCCceecCCC-cEeCCcccccccceecCcccccccccccc-cccc
Confidence 99999999999 9999998 865 3467 4778999997 99999999999999999999974 37777 897
Q ss_pred -CCCCcCCCCCCCCCccccCCCCc-cCCCCCccccccccCCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 384 -NLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 384 -~~~C~~~C~~~~~~~~C~C~~G~-~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
+++|+++|.+++++|+|.|++|| ..++++|++++||..+++|+++|+|++|+|+|.|++||++..++++|++++ .
T Consensus 300 ~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~~~~C~~~~---~ 376 (699)
T 1n7d_A 300 NNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG---S 376 (699)
T ss_dssp STTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCCCCSSCBCCSSCCCCBCCS---S
T ss_pred cccCcCCCcccCCCCcEEeCCCCeEcCCCCcccCccccCCCCccccccccCCCCeeeeeecccccCCCCCcccccc---c
Confidence 46799999999999999999999 556889999999986788999999999999999999999999999999886 4
Q ss_pred CCcEEEeccCCceEEEeccC
Q psy14262 462 EPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 462 ~p~~l~~~~~~~ir~~~l~~ 481 (482)
.+ +|||+++++|++|.|.+
T Consensus 377 ~~-~ll~~~~~~I~~id~~~ 395 (699)
T 1n7d_A 377 IA-YLFFTNRHEVRKMTLDR 395 (699)
T ss_dssp CC-CBCCCCTTC-CEECTTS
T ss_pred ce-eEEecCccceEEEeCCC
Confidence 56 99999999999999865
No 2
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=4.9e-65 Score=569.07 Aligned_cols=373 Identities=34% Similarity=0.722 Sum_probs=123.0
Q ss_pred cccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccccccceeccCcccccceeccCCCceeeecccccccccc
Q psy14262 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFKRILNGTHTLALEFNHRNQSLCFIQQQNVSSVRL 82 (482)
Q Consensus 3 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~~~~~~~~~~~~~~~~~~c~~~~~c~~~~~~~~~~~~ 82 (482)
..|.++||+|. ||+|||..|+|||++||+ |+|||..+. |.. ..|.+
T Consensus 22 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~-----D~sDE~~~~-----------------C~~--------~~C~~--- 67 (791)
T 3m0c_C 22 DRCERNEFQCQ-DGKCISYKWVCDGSAECQ-----DGSDESQET-----------------CLS--------VTCKS--- 67 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCcCcCccCCC-CCCEEehhhcCCCCccCC-----CCCcccccc-----------------ccc--------CccCc---
Confidence 47999999998 899999999999999998 999997521 000 00111
Q ss_pred cccccccCCCCCCCCCCCCCChhhhhhhccCCCCCCcceeeC---CceecCceeeCCCCCCCcccCCCCCCccccccCCC
Q psy14262 83 RCAQINDLLNSWDLPAPEIFPLDERLEKAGMHGENRSPLVTK---NIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159 (482)
Q Consensus 83 ~c~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~ 159 (482)
..|+|. ++|||..|+|||..||.| ++||. +
T Consensus 68 ------------------------------------~~f~C~~~~~~Ci~~~~~CDg~~dC~d------gsDE~-----~ 100 (791)
T 3m0c_C 68 ------------------------------------GDFSCGGRVNRCIPQFWRCDGQVDCDN------GSDEQ-----G 100 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------------------CccccCCCCCCEeeccccCCCCcCcCC------CcccC-----C
Confidence 123443 379999999999999999 99998 8
Q ss_pred CCCccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCCCCC-CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCC
Q psy14262 160 HNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEP 238 (482)
Q Consensus 160 c~~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~-~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~ 238 (482)
|...+|.+.+|+|.++ +||+.+|+|||+.||.|||||.+ |. ..|.+.+|+|.+|+||+..|+|||..|| .|||||.
T Consensus 101 C~~~~C~~~~f~C~~g-~Ci~~~~~CDg~~dC~dgsDE~~-C~~~~C~~~~f~C~~~~Ci~~~~~Cdg~~dC-~dgsDE~ 177 (791)
T 3m0c_C 101 CPPKTCSQDEFRCHDG-KCISRQFVCDSDRDCLDGSDEAS-CPVLTCGPASFQCNSSTCIPQLWACDNDPDC-EDGSDEW 177 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCccccCCeEECCCC-CEECHHHcCCCcccCCCCccccc-ccccccccceeccCCCccccccccCCCCCcC-CCCCCcc
Confidence 9888899999999987 89999999999999999999998 97 5799999999999999999999999999 9999997
Q ss_pred --Ccc--------cccccCCccccCCCCceecCCCccCccCCCCCCCCCCCCCCCCCCCccccCcccccCCCCccCCCCC
Q psy14262 239 --NTC--------IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNW 308 (482)
Q Consensus 239 --~C~--------~~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE~~C~~~~C~~~~f~C~~g~~Ci~~~~ 308 (482)
+|. ...|...+|+|. +|.||+..|+|||..||. |++||.+|....|.+.+|+|.++ .||+.+|
T Consensus 178 ~~~C~~~~~~~~~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~-----dgsDE~~C~~~~C~~~~f~C~~g-~Ci~~~~ 250 (791)
T 3m0c_C 178 PQRCRGLYVFQGDSSPCSAFEFHCL-SGECIHSSWRCDGGPDCK-----DKSDEENCAVATCRPDEFQCSDG-NCIHGSR 250 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCccccCCCCCCCCCCccccc-CCceeccccccCCCCCCC-----CCCCCCCccccccCCCcceecCC-ceEecce
Confidence 673 345888999999 899999999999999999 99999999877899999999987 9999999
Q ss_pred CCCCCCCCCCCCcCCCCCCCcCCcCccCcccc-cCCCcccCCCCcccccccccCCCCCCCCCCCCCCC-CCCCCCcc--C
Q psy14262 309 LCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLC-HPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPF-CNNKADCE--N 384 (482)
Q Consensus 309 ~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C-~~~~f~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~-C~~~~~C~--~ 384 (482)
+|||..||. |++||.+ |... ..| .+.+|+|.+| .||+..++||+..+|.+|+||... |..+ +|. +
T Consensus 251 ~Cdg~~dC~-----dgsDE~~---C~~~-~~C~~~~~~~C~~G-~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~-~C~~~~ 319 (791)
T 3m0c_C 251 QCDREYDCK-----DMSDEVG---CVNV-TLCEGPNKFKCHSG-ECITLDKVCNMARDCRDWSDEPIKECGTN-ECLDNN 319 (791)
T ss_dssp -------------------------------CCSTTCCCCTTS-CCCCSSCCSCSSCCSSSSCSCCCTTBSCC-STTTGG
T ss_pred ecCChhccc-----cccccCc---cccc-ccccCCCccccCCC-cccccccccCCccccccccCccccccccc-cccccc
Confidence 999999999 9999998 8653 345 4789999997 999999999999999999999753 7777 887 4
Q ss_pred CCCcCCCCCCCCCccccCCCCc-cCCCCCccccccccCCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCCCC
Q psy14262 385 LKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463 (482)
Q Consensus 385 ~~C~~~C~~~~~~~~C~C~~G~-~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~~p 463 (482)
..|++.|.+++++|+|.|++|| ..++++|.+++||..++.|++.|+|++|+|+|.|++||+|..++++|++++ ..|
T Consensus 320 ~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~~~~~C~~~~---~~p 396 (791)
T 3m0c_C 320 GGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG---SIA 396 (791)
T ss_dssp GGCSSEEEECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCCCCSSEECCSSCCCCEETT---SCC
T ss_pred cCccccccCCCCCcccCCCCCCccCCCCccccCcccCCCCCCCCeeecCCCCceeecCCCCEeCCCCceeeecc---ccc
Confidence 5788999999999999999999 557889999999987789999999999999999999999999999999998 456
Q ss_pred cEEEeccCCceEEEeccC
Q psy14262 464 ASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 464 ~~l~~~~~~~ir~~~l~~ 481 (482)
+|||+++++||+|.|.+
T Consensus 397 -~Ll~an~~~Ir~i~l~~ 413 (791)
T 3m0c_C 397 -YLFFTNRHEVRKMTLDR 413 (791)
T ss_dssp -EEEEECBSSEEEECTTS
T ss_pred -ccccccccceeEeeccC
Confidence 99999999999999875
No 3
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=100.00 E-value=2e-51 Score=455.48 Aligned_cols=310 Identities=31% Similarity=0.713 Sum_probs=238.1
Q ss_pred cceeeCC-ceecCceeeCCCCCCCcccCCCCCCccccccCCCCCCccCCCCCeecCCC-CceecCCcccCCCCCCCCCCC
Q psy14262 119 SPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGED 196 (482)
Q Consensus 119 ~~~~~~~-~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~c~~~~C~~~~f~C~~~-~~Ci~~~~~CDg~~dC~dgsD 196 (482)
.+|+|.+ +|||..|+|||..||.| +|||. ...|...+|...+|+|.++ ++|||..|+|||+.||.||||
T Consensus 9 ~~f~C~~g~ci~~~~~Cdg~~dC~d------~sDE~---~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~Cdg~~dC~dgsD 79 (699)
T 1n7d_A 9 NEFQCQDGKCISYKWVCDGSAECQD------GSDES---QETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGSD 79 (699)
T ss_dssp --------------------------------------------CCSCSSSSCCCCC--CCCCCSSSTTSSSCCC-CCCT
T ss_pred cceeCCCCcEEcHHhcCCCcccCCC------CCCCC---ccccCCcCCCCCccCCCCCCCceeCcceecCCcccCCCCcc
Confidence 3578877 99999999999999999 99998 1128888899999999875 489999999999999999999
Q ss_pred CCCCCC-CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceecCCCccCccCCCCCCC
Q psy14262 197 EGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDD 275 (482)
Q Consensus 197 E~~~C~-~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~~ 275 (482)
|.+ |. ..|.+.+|+|.+|+||+..|+|||..|| .|||||.+|....|.+.+|+|. +|+||+..|+|||..||.
T Consensus 80 E~~-C~~~~C~~~~f~C~~g~Ci~~~~~Cdg~~dC-~dgsDE~~C~~~~C~~~~f~C~-~~~Ci~~~~~Cdg~~dC~--- 153 (699)
T 1n7d_A 80 EQG-CPPKTCSQDEFRCHDGKCISRQFVCDSDRDC-LDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE--- 153 (699)
T ss_dssp TTS-CSSCCCCSSCCCSSCC----CCCTTCSSCCS-SSSCSSSSCCCCCCCSSCCCCS-SSCCCCTTSTTCSSCCSS---
T ss_pred cCc-ccccccccCcEEcCCCCEecHHHcCCCcCcC-CCCCccCCcCccccCccccCCC-CCcccchhcccCCCCcCC---
Confidence 998 97 5799999999999999999999999999 9999999998888999999998 899999999999999999
Q ss_pred CCCCCCC--CCCCC--------ccccCcccccCCCCccCCCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccCCCc
Q psy14262 276 IVDNTDE--DWDKF--------HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNEL 345 (482)
Q Consensus 276 ~~dgsDE--~~C~~--------~~C~~~~f~C~~g~~Ci~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~~~f 345 (482)
||||| .+|.. ..|.+.+|+|.++ +||+.+|+|||+.||. ||+||.+ |. ...|.+.+|
T Consensus 154 --dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g-~Ci~~~~~CDg~~dC~-----dgsDE~~---C~--~~~C~~~~f 220 (699)
T 1n7d_A 154 --DGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCK-----DKSDEEN---CA--VATCRPDEF 220 (699)
T ss_dssp --SSSSSSCSSSSCCCCCSSCCCCSCSSSCCCSSS-CCCSTTCTTSSSCCST-----TSCSSCS---CC--CCCCCSSEE
T ss_pred --CCcccccccCCCcccccCCCCCCCCcceecCCC-ceEechhccCCCCCCC-----CCccccc---CC--CcccCCCcE
Confidence 99999 88953 4799999999987 9999999999999999 9999998 86 357999999
Q ss_pred ccCCCCcccccccccCCCCCCCCCCCCCCCCCCCCCcc---CCCCcC-CCCCCCC--CccccCCCCccCCCCCccccccc
Q psy14262 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE---NLKCSH-KCSPTPR--GAMCFCPAGQNPNKTQCVDADEC 419 (482)
Q Consensus 346 ~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~~~C~---~~~C~~-~C~~~~~--~~~C~C~~G~~~~~~~C~di~eC 419 (482)
+|.++ .||+.+++|||+.||.+|+||.. |....+|. ...|.+ .|++... .+.+.|+.|+.+....| +++||
T Consensus 221 ~C~~g-~Ci~~~~~Cdg~~dC~dgsde~~-C~~~~~C~~~~~~~C~~g~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~eC 297 (699)
T 1n7d_A 221 QCSDG-NCIHGSRQCDREYDCKDMSDEVG-CVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC-GTNEC 297 (699)
T ss_dssp ESSSS-CEEETTCCSSSCCCSSSSCSSSS-TTCCCCCCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCSSC-CCCCT
T ss_pred ecCCC-ceeeeecccCCCCCCCCCCccCC-CCCCCcccCCCceecCCCcEeCCcccccccceecCccccccccc-ccccc
Confidence 99987 99999999999999999999988 86432563 345543 5654332 35678998884444456 68999
Q ss_pred c-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCC
Q psy14262 420 L-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460 (482)
Q Consensus 420 ~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~ 460 (482)
. ..+.|++.|+|++++|+|.|++||+| .++++|++|+||.
T Consensus 298 ~~~~~~C~~~C~~~~~~~~C~C~~G~~~-~~~~~C~dideC~ 338 (699)
T 1n7d_A 298 LDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ 338 (699)
T ss_dssp TSSTTTSCTTCCCCTTCCCCCCCSSSCC-CSSSCCCCCCCCS
T ss_pred cccccCcCCCcccCCCCcEEeCCCCeEc-CCCCcccCccccC
Confidence 8 55789999999999999999999998 6899999999997
No 4
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=100.00 E-value=1.1e-50 Score=453.33 Aligned_cols=311 Identities=32% Similarity=0.709 Sum_probs=59.3
Q ss_pred CcceeeCC-ceecCceeeCCCCCCCcccCCCCCCccccccCCCCCCccCCCCCeecCCC-CceecCCcccCCCCCCCCCC
Q psy14262 118 RSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSS-NQCVALSKFCDGKPDCSNGE 195 (482)
Q Consensus 118 ~~~~~~~~-~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~c~~~~C~~~~f~C~~~-~~Ci~~~~~CDg~~dC~dgs 195 (482)
..+|+|.+ +|||..|+|||..||.| +|||. ...|...+|.+.+|+|.++ ++|||..|+|||+.||.|||
T Consensus 26 ~~~f~C~~g~Ci~~~~~CDg~~dC~D------~sDE~---~~~C~~~~C~~~~f~C~~~~~~Ci~~~~~CDg~~dC~dgs 96 (791)
T 3m0c_C 26 RNEFQCQDGKCISYKWVCDGSAECQD------GSDES---QETCLSVTCKSGDFSCGGRVNRCIPQFWRCDGQVDCDNGS 96 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCccCCCCCCEEehhhcCCCCccCCC------CCccc---ccccccCccCcCccccCCCCCCEeeccccCCCCcCcCCCc
Confidence 34688988 99999999999999999 99998 1237778899999999872 48999999999999999999
Q ss_pred CCCCCCC-CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceecCCCccCccCCCCCC
Q psy14262 196 DEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTD 274 (482)
Q Consensus 196 DE~~~C~-~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~ 274 (482)
||.+ |. ..|.+.+|+|.+|+||+..|+|||..|| .|||||.+|....|.+.+|+|. ++.||+..|+|||..||.
T Consensus 97 DE~~-C~~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC-~dgsDE~~C~~~~C~~~~f~C~-~~~Ci~~~~~Cdg~~dC~-- 171 (791)
T 3m0c_C 97 DEQG-CPPKTCSQDEFRCHDGKCISRQFVCDSDRDC-LDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-- 171 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCC-ccCccccCCeEECCCCCEECHHHcCCCcccC-CCCcccccccccccccceeccC-CCccccccccCCCCCcCC--
Confidence 9998 97 5799999999999999999999999999 9999999998778999999999 899999999999999999
Q ss_pred CCCCCCCCC--CCC--------CccccCcccccCCCCccCCCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccCCC
Q psy14262 275 DIVDNTDED--WDK--------FHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNE 344 (482)
Q Consensus 275 ~~~dgsDE~--~C~--------~~~C~~~~f~C~~g~~Ci~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~~~ 344 (482)
||+||. +|. ...|.+.+|+|.++ .||+..|+|||+.||. |++||.+ |.. ..|.+.+
T Consensus 172 ---dgsDE~~~~C~~~~~~~~~~~~C~~~~f~C~~g-~Ci~~~~~CDg~~dC~-----dgsDE~~---C~~--~~C~~~~ 237 (791)
T 3m0c_C 172 ---DGSDEWPQRCRGLYVFQGDSSPCSAFEFHCLSG-ECIHSSWRCDGGPDCK-----DKSDEEN---CAV--ATCRPDE 237 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---CCCCcccccCCCccccCCCCCCCCCCcccccCC-ceeccccccCCCCCCC-----CCCCCCC---ccc--cccCCCc
Confidence 999996 673 34688999999977 9999999999999999 9999998 863 5698999
Q ss_pred cccCCCCcccccccccCCCCCCCCCCCCCCCCCCCCCcc---CCCCcC-CCCCCCC--CccccCCCCccCCCCCcccccc
Q psy14262 345 LRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCE---NLKCSH-KCSPTPR--GAMCFCPAGQNPNKTQCVDADE 418 (482)
Q Consensus 345 f~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~~~C~---~~~C~~-~C~~~~~--~~~C~C~~G~~~~~~~C~di~e 418 (482)
|+|.++ .||+.+++|||..||.+|+||.. |....+|. ...|.+ .|++... .+.+.|+.|+.+....| ++++
T Consensus 238 f~C~~g-~Ci~~~~~Cdg~~dC~dgsDE~~-C~~~~~C~~~~~~~C~~G~Ci~~~~~Cd~~~dC~dgsDe~~~~C-~~~~ 314 (791)
T 3m0c_C 238 FQCSDG-NCIHGSRQCDREYDCKDMSDEVG-CVNVTLCEGPNKFKCHSGECITLDKVCNMARDCRDWSDEPIKEC-GTNE 314 (791)
T ss_dssp -------------------------------------CCSTTCCCCTTSCCCCSSCCSCSSCCSSSSCSCCCTTB-SCCS
T ss_pred ceecCC-ceEecceecCChhccccccccCc-ccccccccCCCccccCCCcccccccccCCccccccccCcccccc-cccc
Confidence 999998 99999999999999999999998 87432553 334543 5654332 34678999985555567 5788
Q ss_pred cc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCC
Q psy14262 419 CL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460 (482)
Q Consensus 419 C~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~ 460 (482)
|. ..+.|++.|+|++++|+|.|++||+| .++++|++|+||.
T Consensus 315 C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l-~~g~~C~dideC~ 356 (791)
T 3m0c_C 315 CLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQ 356 (791)
T ss_dssp TTTGGGGCSSEEEECSBSEEEECCTTCEE-ETTTEEECCCCCS
T ss_pred ccccccCccccccCCCCCcccCCCCCCcc-CCCCccccCcccC
Confidence 97 45789999999999999999999999 6799999999996
No 5
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.79 E-value=1.8e-19 Score=144.63 Aligned_cols=76 Identities=41% Similarity=0.962 Sum_probs=69.9
Q ss_pred ccCCCCCeecCCCCceecCCcccCCCCCCCCCCCC-CCCCC-CCCCC-CceecCCCCeeccCCCCCCCcCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDE-GPFCN-AECTP-GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239 (482)
Q Consensus 163 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE-~~~C~-~~C~~-~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~ 239 (482)
.+|.+.+|+|.++ +||+.+|+|||+.||.||||| .+ |. ..|.+ .+|+|.+|+||+..|+|||+.|| .|||||.+
T Consensus 3 ~~C~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~~~-C~~~~C~~~~~f~C~~g~CI~~~~~CDG~~DC-~DgSDE~~ 79 (82)
T 2fyj_A 3 RTCPPNQFSCASG-RCIPISWTCDLDDDCGDRSDESAS-CAYPTCFPLTQFTCNNGRCININWRCDNDNDC-GDNSDEAG 79 (82)
T ss_dssp SSSCTTEEETTSS-CEEETTSSSSCSSSSCSTTTTTSS-CCCSSSCSSSEEECTTSCEEETTCBSSSSBCC-SSSSSCSC
T ss_pred CCCCCCceEeCCC-CEEeccccCCCcccCCCccccccc-cccccCCCCCceECCCCCeEcHHHccCCCCcC-CCCccccC
Confidence 4688999999987 899999999999999999999 77 86 46864 89999999999999999999999 99999998
Q ss_pred cc
Q psy14262 240 TC 241 (482)
Q Consensus 240 C~ 241 (482)
|.
T Consensus 80 C~ 81 (82)
T 2fyj_A 80 CS 81 (82)
T ss_dssp CC
T ss_pred CC
Confidence 84
No 6
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.76 E-value=1.5e-19 Score=144.09 Aligned_cols=74 Identities=42% Similarity=1.015 Sum_probs=68.6
Q ss_pred cCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCCCCC-CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCC--CCc
Q psy14262 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE--PNT 240 (482)
Q Consensus 164 ~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~-~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE--~~C 240 (482)
+|.+.+|+|.++ +||+.+|+|||+.||.|||||.+ |. ..|.+.+|+|.+|+|||..|+|||+.|| .||||| .+|
T Consensus 2 ~C~~~~F~C~~g-~CI~~~~~CDg~~DC~DgSDE~~-C~~~~C~~~~f~C~~g~Ci~~~~~CDg~~DC-~dgsDE~~~~C 78 (80)
T 2fcw_B 2 TCSQAEFRCHDG-KCISRQFVCDSDRDCLDGSDEAS-CPVLTCGPASFQCNSSTCIPQLWACDNDPDC-EDGSDEWPQRC 78 (80)
T ss_dssp CCCTTEEECTTS-CEEEGGGTTSSSCCSTTCTTTTT-HHHHHCCTTEEECTTSCEEEGGGTTSSSCCS-TTCGGGCGGGC
T ss_pred CCCCCccCCCCC-CEEeeecccCCcccCCCcccccc-cccccCCceeeECCCCCEEecccccCCCcCC-CCCCCcCcccC
Confidence 478899999987 89999999999999999999998 86 4699999999999999999999999999 999999 555
No 7
>2fyj_A Low-density lipoprotein receptor-related protein 1; double module, complement type repeat, calcium, beta-2 hairpin, loop-structures; NMR {Homo sapiens} PDB: 2fyl_B
Probab=99.76 E-value=1.2e-18 Score=139.74 Aligned_cols=77 Identities=47% Similarity=0.983 Sum_probs=71.7
Q ss_pred CCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCC-CCcccccccC-CccccCCCCceecCCCccCccCCCCCCCCCCCC
Q psy14262 203 AECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDE-PNTCIHQCFN-GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNT 280 (482)
Q Consensus 203 ~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE-~~C~~~~C~~-~~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgs 280 (482)
..|++++|+|.+|+|||.+|+|||+.|| .||||| .+|....|.+ .+|+|. +|+||+..|+|||+.||. |||
T Consensus 3 ~~C~~~~f~C~~g~Ci~~~~~CDg~~DC-~DgsDE~~~C~~~~C~~~~~f~C~-~g~CI~~~~~CDG~~DC~-----DgS 75 (82)
T 2fyj_A 3 RTCPPNQFSCASGRCIPISWTCDLDDDC-GDRSDESASCAYPTCFPLTQFTCN-NGRCININWRCDNDNDCG-----DNS 75 (82)
T ss_dssp SSSCTTEEETTSSCEEETTSSSSCSSSS-CSTTTTTSSCCCSSSCSSSEEECT-TSCEEETTCBSSSSBCCS-----SSS
T ss_pred CCCCCCceEeCCCCEEeccccCCCcccC-CCccccccccccccCCCCCceECC-CCCeEcHHHccCCCCcCC-----CCc
Confidence 3688999999999999999999999999 999999 7898778965 899999 899999999999999999 999
Q ss_pred CCCCCC
Q psy14262 281 DEDWDK 286 (482)
Q Consensus 281 DE~~C~ 286 (482)
||.+|.
T Consensus 76 DE~~C~ 81 (82)
T 2fyj_A 76 DEAGCS 81 (82)
T ss_dssp SCSCCC
T ss_pred cccCCC
Confidence 999874
No 8
>2fcw_B LDL receptor, low-density lipoprotein receptor; protein-protein complex, RAP, escort protein, calcium- binding; 1.26A {Homo sapiens} SCOP: g.12.1.1 g.12.1.1 PDB: 2kri_B
Probab=99.74 E-value=6.9e-19 Score=140.30 Aligned_cols=75 Identities=41% Similarity=0.900 Sum_probs=70.7
Q ss_pred CCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceecCCCccCccCCCCCCCCCCCCCC-
Q psy14262 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDE- 282 (482)
Q Consensus 204 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE- 282 (482)
.|++++|+|.+|+||+.+|+|||+.|| .|||||.+|....|.+.+|+|. +|+|||..|+|||+.||. |||||
T Consensus 2 ~C~~~~F~C~~g~CI~~~~~CDg~~DC-~DgSDE~~C~~~~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~-----dgsDE~ 74 (80)
T 2fcw_B 2 TCSQAEFRCHDGKCISRQFVCDSDRDC-LDGSDEASCPVLTCGPASFQCN-SSTCIPQLWACDNDPDCE-----DGSDEW 74 (80)
T ss_dssp CCCTTEEECTTSCEEEGGGTTSSSCCS-TTCTTTTTHHHHHCCTTEEECT-TSCEEEGGGTTSSSCCST-----TCGGGC
T ss_pred CCCCCccCCCCCCEEeeecccCCcccC-CCcccccccccccCCceeeECC-CCCEEecccccCCCcCCC-----CCCCcC
Confidence 588999999999999999999999999 9999999998777999999999 899999999999999999 99999
Q ss_pred -CCC
Q psy14262 283 -DWD 285 (482)
Q Consensus 283 -~~C 285 (482)
.+|
T Consensus 75 ~~~C 78 (80)
T 2fcw_B 75 PQRC 78 (80)
T ss_dssp GGGC
T ss_pred cccC
Confidence 555
No 9
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.43 E-value=6.3e-14 Score=144.95 Aligned_cols=97 Identities=35% Similarity=0.787 Sum_probs=87.1
Q ss_pred Ccc--CCCCcCCCCCCCCCccccCCCCc-cCCCCCccccccccCCCCCCceeeecCCceEEecCCCeEECCCCCccccCC
Q psy14262 381 DCE--NLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 381 ~C~--~~~C~~~C~~~~~~~~C~C~~G~-~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
||. +..|++.|.+++++|.|.|++|| ..++++|++++||..+++|++.|+|++|+|+|.|.+||.+..++++|++++
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~C~~g~~~~~~~~~C~~~~ 81 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGFQLDPHTKACKAVG 81 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSSCCBCCSSSCBCCCCTTCCCCTTTSSCCCST
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCCccCCCccceeeeccccccccccccceeecc
Confidence 565 24577899999999999999999 556889999999986789999999999999999999999999999999987
Q ss_pred CCCCCCcEEEeccCCceEEEeccC
Q psy14262 458 VPQDEPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 458 ec~~~p~~l~~~~~~~ir~~~l~~ 481 (482)
..| +|+|+++++||+|+|++
T Consensus 82 ---~~~-~ll~~~~~~I~~i~l~~ 101 (400)
T 3p5b_L 82 ---SIA-YLFFTNRHEVRKMTLDR 101 (400)
T ss_dssp ---TSC-EEEEEETTEEEEECTTS
T ss_pred ---ccc-eeEEeccceeEEEccCC
Confidence 556 99999999999999975
No 10
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.39 E-value=1.8e-13 Score=140.73 Aligned_cols=97 Identities=36% Similarity=0.850 Sum_probs=45.6
Q ss_pred Ccc--CCCCcCCCCCCCCCccccCCCCc--cCCCCCccccccccCCCCCCceeeecCCceEEecCCCeEECCCCCccccC
Q psy14262 381 DCE--NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 381 ~C~--~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
+|. +.+|+++|.+..++|+|.|++|| .+++++|.+++||...++|++.|+|++|+|+|.|++||.|.+++++|+++
T Consensus 5 ~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~C~~g~~l~~d~~~C~~~ 84 (386)
T 3v65_B 5 NCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKAL 84 (386)
T ss_dssp -----------------------------------------------CCTTEEC-----CCEECCTTEEECTTSSCEEEC
T ss_pred cccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCCCCCCeEEECCCceEcCCCCeECCc
Confidence 676 45688899988899999999999 45688999999998668999999999999999999999999999999998
Q ss_pred CCCCCCCcEEEeccCCceEEEeccC
Q psy14262 457 NVPQDEPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 457 dec~~~p~~l~~~~~~~ir~~~l~~ 481 (482)
+ ..+ +|+|+++++|++|.|++
T Consensus 85 ~---~~~-~l~~~~~~~I~~i~~~~ 105 (386)
T 3v65_B 85 G---PEP-VLLFANRIDIRQVLPHR 105 (386)
T ss_dssp S---SCC-EEEEECBSCEEEECTTS
T ss_pred c---ccc-eeEeecCccceeeccCC
Confidence 7 455 99999999999999875
No 11
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.27 E-value=2.3e-12 Score=139.11 Aligned_cols=106 Identities=25% Similarity=0.436 Sum_probs=78.9
Q ss_pred CCCCcceeeCC-ceecCceeeCCCCCCCcccCCCCCCccccccCCCCCCccCCCCCeecCCCCceecCCcccCCCCCCCC
Q psy14262 115 GENRSPLVTKN-IQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSN 193 (482)
Q Consensus 115 ~~~~~~~~~~~-~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~c~~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~d 193 (482)
|.....+.|.. .+++..+.+|+..+|.+ .++ ..+...+|+|.++ +||+..++|||+.||+|
T Consensus 170 G~E~sl~~C~~~~~~~~~h~~DagV~C~~------~~~-----------~c~~~~~~~C~~~-~ci~~~~~Cdg~~dC~d 231 (565)
T 2xrc_A 170 GLETSLAECTFTKRRTMGYQDFADVVCYT------QKA-----------DSPMDDFFQCVNG-KYISQMKACDGINDCGD 231 (565)
T ss_dssp SCCSCGGGSEEECCCCCSSCCCCEEEBCC------C--------------------CBCTTS-CBCCTTSTTSSSCCSSS
T ss_pred CccCchhhcccCcccccccccCCceeccc------ccc-----------CCCCcCeeECCCC-CccCHHHcCCCcccCCC
Confidence 33344444444 44455555555555554 221 1234466999987 89999999999999999
Q ss_pred CCCCCCCCCCCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCcc
Q psy14262 194 GEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTC 241 (482)
Q Consensus 194 gsDE~~~C~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~ 241 (482)
+|||.+ |. .|+..+|+|.++.||+..++|||..|| .||+||.+|.
T Consensus 232 ~sDE~~-C~-~c~~~~~~C~~~~C~~~~~~cdG~~dC-~~gsDE~~C~ 276 (565)
T 2xrc_A 232 QSDELC-CK-ACQGKGFHCKSGVCIPSQYQCNGEVDC-ITGEDEVGCA 276 (565)
T ss_dssp SSSSSS-BS-SCSSSCEEETTTEEECGGGTTSSSCCS-SSCTTSSSCC
T ss_pred Cccccc-cc-ccCCCceecCCCcccCccccCCCcccC-CCCccccCcC
Confidence 999998 96 599999999999999999999999999 9999999885
No 12
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.25 E-value=2.9e-14 Score=133.04 Aligned_cols=115 Identities=16% Similarity=0.185 Sum_probs=91.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCceec--CCCCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceecCCCc
Q psy14262 187 GKPDCSNGEDEGPFCNAECTPGQFSC--GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWL 264 (482)
Q Consensus 187 g~~dC~dgsDE~~~C~~~C~~~~f~C--~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~~~~~ 264 (482)
+..+|.|++||.+ |. .|++++|+| .+|+|||.+|+|||..|| .|||||.+|....|.+.+|+|. +
T Consensus 39 ~~~~c~d~sDE~~-C~-~C~~~~F~C~~~~g~CIp~~~~CDG~~DC-~DgSDE~~C~~~~C~~~~F~c~------~---- 105 (215)
T 2gtl_O 39 KAGSLRHRVEELE-DP-SCDEHEHQCGGDDPQCISKLFVCDGHNDC-RNGEDEKDCTLPTKAGDKFIGD------V---- 105 (215)
T ss_dssp HHHHHHHHHHHHS-CC-SSCTTEEECCSSSCCEEEGGGTTSSSCCS-SSCHHHHCCCCSSCTTCEEEEE------E----
T ss_pred ccccCCcchhhcc-CC-CCCCcceeeCCCCCcCccccccCCCCCcC-CCcccccCCCCCCcCCCceeee------E----
Confidence 3458899999998 85 799999999 789999999999999999 9999999998888999999874 2
Q ss_pred cCccCCCCCCCCCCCCCCCCCCCcccc--CcccccCCC--CccCC-----------CCCCCCCCCCCCCCCcCCCCCCCc
Q psy14262 265 CDEEMDCSTDDIVDNTDEDWDKFHQCF--NGQVQCALS--KKCIP-----------HNWLCDEEMDCSTDDIVDNTDEDW 329 (482)
Q Consensus 265 CDg~~dC~~~~~~dgsDE~~C~~~~C~--~~~f~C~~g--~~Ci~-----------~~~~CDg~~DC~~g~~~dgsDE~~ 329 (482)
++ ..|. +..++..|. ..|. ..+|.|.+. ..||. .+|.|||+.+ ++++|..
T Consensus 106 -~~-~~C~-----~~~~~~~c~-~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd-------~gs~el~ 170 (215)
T 2gtl_O 106 -CF-DHCT-----KRRPEHMTL-AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS-------FADHRLT 170 (215)
T ss_dssp -EE-ESSC-----SSCCSEEEE-EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE-------TTTTEEE
T ss_pred -CC-Cccc-----CCCCCCcee-eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec-------CCcceee
Confidence 22 2377 777777664 3444 366888754 34776 7788988888 3688876
No 13
>2gtl_O Extracellular hemoglobin linker L3 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=99.25 E-value=1.3e-13 Score=128.77 Aligned_cols=128 Identities=19% Similarity=0.180 Sum_probs=98.2
Q ss_pred CCCCCCcccCCCCCCccccccCCCCCCccCCCCCeec--CCCCceecCCcccCCCCCCCCCCCCCCCCC-CCCCCCceec
Q psy14262 136 YNQDILYWCDSHLNTVESVRVDGSHNAVLCHPNELRC--GSSNQCVALSKFCDGKPDCSNGEDEGPFCN-AECTPGQFSC 212 (482)
Q Consensus 136 g~~dc~dw~d~~~~sdE~~~~~~~c~~~~C~~~~f~C--~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~-~~C~~~~f~C 212 (482)
...+|.+ ++||. +|. +|.+.+|+| .++ +|||.+|+|||..||.|||||.+ |. .+|.+.+|+|
T Consensus 39 ~~~~c~d------~sDE~-----~C~--~C~~~~F~C~~~~g-~CIp~~~~CDG~~DC~DgSDE~~-C~~~~C~~~~F~c 103 (215)
T 2gtl_O 39 KAGSLRH------RVEEL-----EDP--SCDEHEHQCGGDDP-QCISKLFVCDGHNDCRNGEDEKD-CTLPTKAGDKFIG 103 (215)
T ss_dssp HHHHHHH------HHHHH-----SCC--SSCTTEEECCSSSC-CEEEGGGTTSSSCCSSSCHHHHC-CCCSSCTTCEEEE
T ss_pred ccccCCc------chhhc-----cCC--CCCCcceeeCCCCC-cCccccccCCCCCcCCCcccccC-CCCCCcCCCceee
Confidence 3457888 99999 783 699999999 565 99999999999999999999998 97 5799999998
Q ss_pred CCCCeeccCCCCCCCcCCCCCCCCCCCccccccc--CCccccCCC--Cceec-----------CCCccCccCCCCCCCCC
Q psy14262 213 GMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCF--NGQVQCALS--KKCIP-----------HNWLCDEEMDCSTDDIV 277 (482)
Q Consensus 213 ~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~--~~~f~C~~~--g~Ci~-----------~~~~CDg~~dC~~~~~~ 277 (482)
. +.. ..| .+++++..|. ..|. ..+|.|... ..||. .+|.|||+.+
T Consensus 104 ~-----~~~------~~C-~~~~~~~~c~-~~~s~~~~~~fc~~~~v~~~i~l~~~~~g~~~~~s~~cDG~yd------- 163 (215)
T 2gtl_O 104 D-----VCF------DHC-TKRRPEHMTL-AFESSSIAAFFTPIADLHVHIEIESETDEDESEVSMPADGEYS------- 163 (215)
T ss_dssp E-----EEE------ESS-CSSCCSEEEE-EEEEEEECTTCTTEEEEEEEEEEECCCSSCCCEEEEEEEEEEE-------
T ss_pred e-----ECC------Ccc-cCCCCCCcee-eeeccccccccCCCCccCeEEEEEeecCCCccccceeecCEec-------
Confidence 3 222 247 7778877664 3444 467888832 24777 7888999888
Q ss_pred CCCCCCCCCCccccCcccccC
Q psy14262 278 DNTDEDWDKFHQCFNGQVQCA 298 (482)
Q Consensus 278 dgsDE~~C~~~~C~~~~f~C~ 298 (482)
++++|..|.++.+...+|+|.
T Consensus 164 ~gs~el~~~pp~~~~l~f~C~ 184 (215)
T 2gtl_O 164 FADHRLTIHPPEEDGLGLVGE 184 (215)
T ss_dssp TTTTEEEECCSSTTTEEEEEE
T ss_pred CCcceeeecCCCCCCceeEEE
Confidence 578888776666666677775
No 14
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.20 E-value=6.6e-12 Score=135.47 Aligned_cols=102 Identities=27% Similarity=0.453 Sum_probs=84.2
Q ss_pred CeecCCCCceecCCcccCCCCCCCCCCCCCCCCCCCCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCcccccccCC
Q psy14262 169 ELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNG 248 (482)
Q Consensus 169 ~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~ 248 (482)
.|.|..+ .+++..+.+|+..+|.+.+++ | +...+|+|.+|.||+..++|||..|| .|++||.+|.. |.+.
T Consensus 175 l~~C~~~-~~~~~~h~~DagV~C~~~~~~---c---~~~~~~~C~~~~ci~~~~~Cdg~~dC-~d~sDE~~C~~--c~~~ 244 (565)
T 2xrc_A 175 LAECTFT-KRRTMGYQDFADVVCYTQKAD---S---PMDDFFQCVNGKYISQMKACDGINDC-GDQSDELCCKA--CQGK 244 (565)
T ss_dssp GGGSEEE-CCCCCSSCCCCEEEBCCC---------------CBCTTSCBCCTTSTTSSSCCS-SSSSSSSSBSS--CSSS
T ss_pred hhhcccC-cccccccccCCceeccccccC---C---CCcCeeECCCCCccCHHHcCCCcccC-CCCcccccccc--cCCC
Confidence 3566555 477778999999999877544 2 23456999999999999999999999 99999999963 9999
Q ss_pred ccccCCCCceecCCCccCccCCCCCCCCCCCCCCCCCC
Q psy14262 249 QVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 286 (482)
Q Consensus 249 ~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE~~C~ 286 (482)
+|+|. ++.||+..++|||..||. +|+||.+|.
T Consensus 245 ~~~C~-~~~C~~~~~~cdG~~dC~-----~gsDE~~C~ 276 (565)
T 2xrc_A 245 GFHCK-SGVCIPSQYQCNGEVDCI-----TGEDEVGCA 276 (565)
T ss_dssp CEEET-TTEEECGGGTTSSSCCSS-----SCTTSSSCC
T ss_pred ceecC-CCcccCccccCCCcccCC-----CCccccCcC
Confidence 99999 889999999999999999 999999886
No 15
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=99.19 E-value=3.8e-12 Score=107.24 Aligned_cols=85 Identities=35% Similarity=0.739 Sum_probs=36.0
Q ss_pred CCCCCCCCCCCCCCcc--CCCCcCCCCCCCCCccccCCCCc-cCCCCCccccccccCCCCCCceeeecCCceEEecCCCe
Q psy14262 368 NGEDEGPFCNNKADCE--NLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGY 444 (482)
Q Consensus 368 dgsDE~~~C~~~~~C~--~~~C~~~C~~~~~~~~C~C~~G~-~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy 444 (482)
++..... |.++ +|. +++|+++|++++++|+|.|++|| ..+++.|++|+||....+|.+.|+|++|+|+|.|++||
T Consensus 20 ~~~~~~~-Cd~n-eC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~C~~Gy 97 (107)
T 2w2n_E 20 NLYFQGA-MGTN-ECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQCEEGF 97 (107)
T ss_dssp CCCCSCC-BSCC-GGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------
T ss_pred CCcCCCC-CcCc-cCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccccccccCCCCCcCCeeecCCCCEEEECCCCc
Confidence 3344444 7666 887 46788899999999999999999 44568899999998557899999999999999999999
Q ss_pred EECCCCCccc
Q psy14262 445 TLRPDGKSCT 454 (482)
Q Consensus 445 ~l~~d~~tC~ 454 (482)
++..++++|+
T Consensus 98 ~~~~d~~~C~ 107 (107)
T 2w2n_E 98 QLDPHTKACK 107 (107)
T ss_dssp ----------
T ss_pred eECCCCCccC
Confidence 9998888874
No 16
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=99.13 E-value=3.2e-11 Score=97.61 Aligned_cols=76 Identities=37% Similarity=0.833 Sum_probs=65.1
Q ss_pred CccCCC--C-cCCCCCCCCCccccCCCCc--cCCCCCccccccccCCCCCCceeeecCCceEEec--CCCeEECCCCCcc
Q psy14262 381 DCENLK--C-SHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSC--TEGYTLRPDGKSC 453 (482)
Q Consensus 381 ~C~~~~--C-~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C--~~Gy~l~~d~~tC 453 (482)
+|...+ | ..+|++++++|+|.|++|| ..+++.|++++||. .++|.+.|+|++|+|+|.| .+||.+..++++|
T Consensus 5 eC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~dideC~-~~~C~~~C~n~~g~y~C~C~g~~G~~~~~~~~~C 83 (87)
T 1z6c_A 5 ECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCEDIDECS-ENMCAQLCVNYPGGYTCYCDGKKGFKLAQDQKSC 83 (87)
T ss_dssp SSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEECCCHHH-HSCCSSEECCCSSSCCEECCSSSCCBCCTTSSSC
T ss_pred cccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCCCcCeeC-CCCCCCEEEccCCCEEEECCCCcCCcccCCCCcc
Confidence 666433 6 3489999999999999999 44578999999997 4679999999999999999 6999999999999
Q ss_pred ccCC
Q psy14262 454 TAVN 457 (482)
Q Consensus 454 ~did 457 (482)
++|+
T Consensus 84 ~di~ 87 (87)
T 1z6c_A 84 EVVS 87 (87)
T ss_dssp BCCC
T ss_pred eECc
Confidence 8875
No 17
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.12 E-value=7.9e-11 Score=103.20 Aligned_cols=116 Identities=23% Similarity=0.643 Sum_probs=86.3
Q ss_pred cccCCCcccCCCCccccc--ccccCCCCCCCCCCCCCCCCC--CCCCccCCCCcC--CCCCCCCCccccCCCCccCCCCC
Q psy14262 339 LCHPNELRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCN--NKADCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQ 412 (482)
Q Consensus 339 ~C~~~~f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~--~~~~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~ 412 (482)
+|.....+|.++++|++. +++| .|+.|+.... |. ++ +|...+|.+ +|++..++|+|.|++|| .+..
T Consensus 7 eC~~~~~~C~~~g~C~~~~g~~~C----~C~~Gy~G~~-C~~~~~-~C~~~~C~~~~~C~~~~g~~~C~C~~G~--~G~~ 78 (135)
T 2vj3_A 7 ECSLGANPCEHAGKCINTLGSFEC----QCLQGYTGPR-CEIDVN-ECVSNPCQNDATCLDQIGEFQCICMPGY--EGVH 78 (135)
T ss_dssp TTTSSSCSSSTTCEEEECSSSEEE----ECCTTEESTT-SCEECC-TTTTCCCCSSCEEEECSSCEEEECCTTE--ESSS
T ss_pred cccCCCCCCCCCCEeECCCCCEEE----ECCCCCcCCc-ccccCc-cCCCCCCCCCCEEeCCCCCceeeCCCCC--cCCc
Confidence 454445678887799876 7889 8999987766 86 44 888778864 79999999999999999 5667
Q ss_pred cc-ccccccCCCCCC--ceeeecCCceEEecCCCeEECCCCCccc-cCCCCCCCCcEEEe
Q psy14262 413 CV-DADECLIDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCT-AVNVPQDEPASIIF 468 (482)
Q Consensus 413 C~-di~eC~~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~-didec~~~p~~l~~ 468 (482)
|. ++++|. ..+|. +.|+++.++|+|.|++||. ++.|. +|++|+..+ .+.+
T Consensus 79 C~~~~~~C~-~~~C~~~g~C~~~~g~~~C~C~~G~~----G~~C~~~i~~C~~~~-~~c~ 132 (135)
T 2vj3_A 79 CEVNTDECA-SSPCLHNGRCLDKINEFQCECPTGFT----GHLCQVDLHHILDAQ-KMVW 132 (135)
T ss_dssp SCEECCTTT-TCCSTTTCEEEECSSCEEEECCTTEE----SSSSCEECC-----------
T ss_pred ceecCCccc-CCCcCCCCEeECCCCCeEEECCCCCc----CCccCccCccccCCC-ccee
Confidence 85 788997 45784 6899999999999999998 77895 899998776 4433
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.12 E-value=2e-11 Score=107.97 Aligned_cols=109 Identities=29% Similarity=0.625 Sum_probs=85.9
Q ss_pred ccCCCCcccccccccCCCCCCCCCCCCC--------CCCCCCCCccCC---CCcC--CCCCCCCCccccCCCCc-cC-C-
Q psy14262 346 RCGSSNQCVALSKFCDGKPDCSNGEDEG--------PFCNNKADCENL---KCSH--KCSPTPRGAMCFCPAGQ-NP-N- 409 (482)
Q Consensus 346 ~C~~g~~Ci~~~~~CDg~~dC~dgsDE~--------~~C~~~~~C~~~---~C~~--~C~~~~~~~~C~C~~G~-~~-~- 409 (482)
.|.++++|++. ++| .|+.|+... ..|...++|... +|.+ +|++++++|+|.|++|| .. .
T Consensus 8 ~C~~~~~C~~~-~~C----~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 82 (143)
T 2bou_A 8 WCPQDSSCVNA-TAC----RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGA 82 (143)
T ss_dssp TCCTTEEESSS-SCE----EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCC
T ss_pred cCCCCCEEcCC-CEE----eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCc
Confidence 57666678764 777 788886431 238633489843 7873 89999999999999999 22 1
Q ss_pred -------CCCcccccccc-CCCCCC--ceeeecCCceEEecCCCeEECCCCCccccCCCC
Q psy14262 410 -------KTQCVDADECL-IDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVP 459 (482)
Q Consensus 410 -------~~~C~di~eC~-~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec 459 (482)
+..|++++||. ...+|. +.|+|++|+|+|.|++||++..+++.|.++++|
T Consensus 83 ~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~~~~C 142 (143)
T 2bou_A 83 KTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQKDTVC 142 (143)
T ss_dssp SCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBTTCCB
T ss_pred cccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCccCCcc
Confidence 45899999998 457895 799999999999999999999999999988865
No 19
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=99.09 E-value=1.7e-11 Score=97.30 Aligned_cols=66 Identities=21% Similarity=0.445 Sum_probs=56.6
Q ss_pred CCCCccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCC--CCC--CCCCCCceecCC--CCeeccCCCC
Q psy14262 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP--FCN--AECTPGQFSCGM--GKCIPESWKC 224 (482)
Q Consensus 159 ~c~~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~--~C~--~~C~~~~f~C~~--g~Ci~~~~~C 224 (482)
+|+...|.+.+|+|.++++|||.+|+|||+.||.|||||.+ .|. .+|.+.+|+|.+ +.||+..++.
T Consensus 3 ~C~~~~C~~~~f~C~~~g~CIp~~~~CDg~~DC~DgsDE~~~~~C~~~~~C~~~~f~c~~~~~~ci~~~~~g 74 (80)
T 2kny_A 3 KLEGKTCGPSSFSCPGTHVCVPERWLCDGDKDCADGADESIAAGCLYNSTGSGSGSGSTEELRVRLASHLRK 74 (80)
T ss_dssp SCSSCCCSSSEEECTTSSCEEEHHHHTTSSCCSSSSTTTSGGGTCSSSSTTTTCSSCHHHHHHHHTTTTTTT
T ss_pred CCCCCCCCCCceecCCCCeEcChhhcCCCCCCCCCCCccccccCCCCCcccCcccchhhhHHHHHHHHHHHH
Confidence 57778899999999865599999999999999999999984 265 679999999998 6899887654
No 20
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.07 E-value=3.8e-11 Score=106.79 Aligned_cols=78 Identities=33% Similarity=0.719 Sum_probs=68.6
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCcccccccc-CCCCCCcee-eecCCceEEecCCCeEECCCCCccccC
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVDADECL-IDGSCDQTC-TNTHLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~-~~~~Cs~~C-~n~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
+|..++|.+ +|++++++|+|.|++|| .+..|.++++|. .+++|.+.| +|+.|+|+|.|++||.|..++++|.++
T Consensus 50 eC~~~pC~n~g~C~~~~~~y~C~C~~G~--~G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~ 127 (146)
T 1x7a_L 50 QCEPNPCLNGGLCKDDINSYECWCQVGF--EGKNCELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPA 127 (146)
T ss_dssp CCSSCSSCTTCEEEECSSCEEEECCSSE--ESTTTCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEEC
T ss_pred cCCCCCCCCCCEeECCCCCEEEecCCCC--cCCcCCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCC
Confidence 676667765 89999999999999999 577899999998 357898899 999999999999999999999999998
Q ss_pred CCCC
Q psy14262 457 NVPQ 460 (482)
Q Consensus 457 dec~ 460 (482)
++..
T Consensus 128 ~~~p 131 (146)
T 1x7a_L 128 VPFP 131 (146)
T ss_dssp SSSC
T ss_pred CCCC
Confidence 8643
No 21
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.06 E-value=7.7e-11 Score=95.07 Aligned_cols=74 Identities=34% Similarity=0.712 Sum_probs=61.8
Q ss_pred CccC--CCCcC-CCCCCCCCccccCCCCcc---CCCCCcccccccc-CCCCCC-ceeeecCCceEEecCCCeEECCCCCc
Q psy14262 381 DCEN--LKCSH-KCSPTPRGAMCFCPAGQN---PNKTQCVDADECL-IDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKS 452 (482)
Q Consensus 381 ~C~~--~~C~~-~C~~~~~~~~C~C~~G~~---~~~~~C~di~eC~-~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~t 452 (482)
||.. ++|.+ +|++++++|+|.|++||. ..++.|++|+||. .+..|. +.|+|++|+|+|.|++||++..++++
T Consensus 5 eC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~~~~ 84 (86)
T 1lmj_A 5 ECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLSPNISA 84 (86)
T ss_dssp TTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCCSSSCC
T ss_pred cccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccCCCCCc
Confidence 6663 33765 899999999999999993 3478999999998 455675 69999999999999999999988887
Q ss_pred cc
Q psy14262 453 CT 454 (482)
Q Consensus 453 C~ 454 (482)
|.
T Consensus 85 Ci 86 (86)
T 1lmj_A 85 CI 86 (86)
T ss_dssp CC
T ss_pred cC
Confidence 73
No 22
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.04 E-value=1.1e-10 Score=82.02 Aligned_cols=38 Identities=42% Similarity=0.908 Sum_probs=35.2
Q ss_pred CcccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 2 ~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
...|.+++|+|. ||+|||..|+|||+.||+ |+|||..|
T Consensus 3 ~~~C~~~~F~C~-~g~CI~~~~~CDG~~DC~-----DgSDE~~c 40 (45)
T 1d2l_A 3 PPQCQPGEFACA-NSRCIQERWKCDGDNDCL-----DNSDEAPA 40 (45)
T ss_dssp CCBTTBTCEEET-TTEEECGGGTTTSSCTTT-----TCSTTSTT
T ss_pred CCcCCCCceEcC-CCCeEehhhccCCCCCCC-----CCCCCCCC
Confidence 468999999998 899999999999999998 99999865
No 23
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=99.03 E-value=1.1e-10 Score=78.65 Aligned_cols=36 Identities=36% Similarity=0.791 Sum_probs=33.4
Q ss_pred ccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 4 QCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 4 ~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
.|.+++|+|. +|+|||..|+|||+.||+ |+|||..|
T Consensus 1 ~C~~~~f~C~-~g~Ci~~~~~CDg~~DC~-----DgsDE~~C 36 (37)
T 1ajj_A 1 PCSAFEFHCL-SGECIHSSWRCDGGPDCK-----DKSDEENC 36 (37)
T ss_dssp CCCTTCEECT-TSCEECGGGTTSSSCCST-----TCGGGTTC
T ss_pred CCCCCceEcC-CCCeechhhccCCCCCCC-----CCccccCC
Confidence 4889999998 899999999999999998 99999865
No 24
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=99.03 E-value=1.4e-10 Score=80.49 Aligned_cols=39 Identities=38% Similarity=0.877 Sum_probs=35.2
Q ss_pred cccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCccccc
Q psy14262 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 46 (482)
Q Consensus 3 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~ 46 (482)
..|.+++|+|.++|+|||..|+|||+.||+ |+|||..|.
T Consensus 2 ~~C~~~~F~C~~~g~CI~~~~~CDg~~DC~-----DgSDE~~C~ 40 (42)
T 1cr8_A 2 GGCHTDEFQCRLDGLCIPLRWRCDGDTDCM-----DSSDEKSCE 40 (42)
T ss_dssp CCSSTTCEECTTTCCEECGGGSSSSSCCSS-----SSTTTTTCC
T ss_pred CCCCCCceEeCCCCeEcChhhcCCCCcCCC-----CCCcccCCC
Confidence 479999999985699999999999999998 999998763
No 25
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=99.02 E-value=1.5e-10 Score=80.71 Aligned_cols=39 Identities=31% Similarity=0.586 Sum_probs=34.9
Q ss_pred CcccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 2 ~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
...|.+++|+|.++++|||..|+|||+.||+ |+|||.+|
T Consensus 4 ~~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~-----DgSDE~~C 42 (43)
T 2jm4_A 4 DVKCSLGYFPCGNITKCLPQLLHCNGVDDCG-----NQADEDNC 42 (43)
T ss_dssp SCSCCTTEEECSSSSCEEEGGGTTSSCCCSS-----SCCTTSSC
T ss_pred CCCCCCCeeECCCCCeEcCHhhccCCCCCCC-----CCcccCCC
Confidence 4679999999993399999999999999998 99999865
No 26
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.00 E-value=2.7e-10 Score=91.00 Aligned_cols=72 Identities=35% Similarity=0.828 Sum_probs=60.6
Q ss_pred Ccc-CCCCcC-CCCCCCCCccccCCCCccCCCCCccccccccCCCCCC-ceeeecCCceEEecCCCeEECCCCCcc
Q psy14262 381 DCE-NLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKSC 453 (482)
Q Consensus 381 ~C~-~~~C~~-~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~tC 453 (482)
+|. ..+|.+ +|++++++|+|.|++||..+++.|++++||....+|. +.|+|+.|+|+|.|++||++..+ ++|
T Consensus 7 eC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~~~-~~C 81 (82)
T 1emn_A 7 ECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPGPM-MTC 81 (82)
T ss_dssp SSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCCSS-SCC
T ss_pred cCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeCCC-Ccc
Confidence 676 367765 8999999999999999943578899999997556784 69999999999999999998766 555
No 27
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.99 E-value=1e-10 Score=84.38 Aligned_cols=40 Identities=35% Similarity=0.871 Sum_probs=36.2
Q ss_pred cccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCccccccc
Q psy14262 3 HQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYF 48 (482)
Q Consensus 3 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~~~ 48 (482)
..|.++||+|. ||+|||..|+|||+.||+ |+|||..+..+
T Consensus 5 ~~C~~~~F~C~-nG~CIp~~~~CDG~~DC~-----DgSDE~~~~~~ 44 (52)
T 2m0p_A 5 ASCLDTQYTCD-NHQCISKNWVCDTDNDCG-----DGSDEKNCNST 44 (52)
T ss_dssp CSSCSSEEECT-TCCEEETTSTTSSSCSSS-----SCHHHHSCCCC
T ss_pred CCCCCCceECC-CCCEEecCccCCCCCCCC-----CCCccccchhh
Confidence 57999999998 899999999999999998 99999876543
No 28
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.99 E-value=1.7e-10 Score=80.83 Aligned_cols=38 Identities=45% Similarity=0.960 Sum_probs=33.3
Q ss_pred CcccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 2 ~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
...|.+++|+|. |++|||..|+|||+.||+ |+|||..|
T Consensus 5 ~~~C~~~~f~C~-~g~CI~~~~~CDg~~DC~-----DgSDE~~C 42 (44)
T 3a7q_B 5 AKECEKDQFQCR-NERCIPSVWRCDEDDDCL-----DHSDEDDC 42 (44)
T ss_dssp ---CCTTEEECT-TSCEEEGGGTTSSSCCSS-----SSTTTSCC
T ss_pred CCCCCCCceEcC-CCCEeChhhccCCCCCCC-----CCccccCC
Confidence 357999999998 899999999999999998 99999876
No 29
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.97 E-value=3e-10 Score=96.57 Aligned_cols=66 Identities=26% Similarity=0.507 Sum_probs=58.1
Q ss_pred CCCCCCCCccccCCCCccCCCCCcccc---cccc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCC
Q psy14262 390 KCSPTPRGAMCFCPAGQNPNKTQCVDA---DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 390 ~C~~~~~~~~C~C~~G~~~~~~~C~di---~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
+|+++.++|+|.|++|| .+..|+++ ++|. .++.|.+.|+|+.++|+|.|++||++..++++|.++.
T Consensus 27 ~C~~~~~~y~C~C~~G~--~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~~ 96 (114)
T 1aut_L 27 TCIDGIGSFSCDCRSGW--EGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPAV 96 (114)
T ss_dssp EECCCSSCCCEEECTTE--ESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEECS
T ss_pred CCCCCCCCcEeeCCCCC--cCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcCc
Confidence 78999999999999999 55668764 4687 4678989999999999999999999999999999876
No 30
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.95 E-value=3.3e-10 Score=81.51 Aligned_cols=39 Identities=33% Similarity=0.835 Sum_probs=35.3
Q ss_pred CcccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 2 ~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
...|.+++|+|..+++|||..|+|||+.||+ |+|||..|
T Consensus 4 ~~~C~~~~F~C~~~g~CI~~~~~CDG~~DC~-----DgSDE~~C 42 (50)
T 2knx_A 4 GKTCGPSSFSCPGTHVCVPERWLCDGDKDCA-----DGADESIA 42 (50)
T ss_dssp TCTTCTTEEEETTTTEEEETTTTTSSSCCST-----TCGGGSGG
T ss_pred CCCCCCCcEEcCCCCeEcChhhcCCCCCCCC-----CCCccccc
Confidence 3579999999965899999999999999998 99999875
No 31
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.95 E-value=3.1e-10 Score=80.74 Aligned_cols=38 Identities=39% Similarity=0.851 Sum_probs=34.4
Q ss_pred cccCCCCeeeCC----CCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 3 HQCFNGQVQCAL----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 3 ~~C~~~~f~C~~----~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
..|.+++|+|.+ +++|||..|+|||+.||+ |+|||..|
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~-----DgSDE~~C 46 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCD-----DGRDEWGC 46 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSS-----SSTTTGGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCC-----CCcccCCC
Confidence 579999999985 799999999999999998 99999876
No 32
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.93 E-value=3.8e-10 Score=79.08 Aligned_cols=38 Identities=42% Similarity=1.002 Sum_probs=34.9
Q ss_pred CcccCCCCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 2 IHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 2 ~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
...|.+++|+|. ||+|||..|+|||+.||+ |+|||..+
T Consensus 2 ~~~C~~~~F~C~-~g~CI~~~~~CDg~~DC~-----DgSDE~~~ 39 (44)
T 1j8e_A 2 SHSCSSTQFKCN-SGRCIPEHWTCDGDNDCG-----DYSDETHA 39 (44)
T ss_dssp CSSSCTTEEECT-TSCEEEGGGTTSSSCCSS-----SSGGGSHH
T ss_pred CCCCCCCceEeC-CCCeEecCcccCCCCCCC-----CCCCCCCc
Confidence 468999999998 899999999999999998 99999854
No 33
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.92 E-value=2.8e-10 Score=105.77 Aligned_cols=75 Identities=36% Similarity=0.785 Sum_probs=37.6
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCccc-c-cccc-CCCCCCceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVD-A-DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~d-i-~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
+|..++|.+ +|++..++|.|.|++|| .+..|.+ + ++|. .+++|.+.|+++.|+|+|.|++||.|..++++|.+
T Consensus 44 eC~~~pC~ngg~C~n~~g~y~C~C~~Gf--~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~ 121 (195)
T 1nfu_B 44 QCETSPCQNQGKCKDGLGEYTCTCLEGF--EGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (195)
T ss_dssp ---------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred ccCCCCCCCCCEeECCCCCeeEeCCCCc--eeccccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCcccc
Confidence 677677876 89999999999999999 5788986 5 8898 45789889999999999999999999999999998
Q ss_pred CC
Q psy14262 456 VN 457 (482)
Q Consensus 456 id 457 (482)
++
T Consensus 122 ~~ 123 (195)
T 1nfu_B 122 TG 123 (195)
T ss_dssp SS
T ss_pred CC
Confidence 76
No 34
>1cr8_A Protein (LOW density lipoprotein receptor related protein); ligand binding, calcium binding, LDLR, LRP, lipid binding protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.91 E-value=8.8e-10 Score=76.39 Aligned_cols=38 Identities=37% Similarity=0.905 Sum_probs=28.6
Q ss_pred cCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCCCCC
Q psy14262 164 LCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202 (482)
Q Consensus 164 ~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~ 202 (482)
.|...+|+|.+.++||+..|+|||+.||.|||||.+ |.
T Consensus 3 ~C~~~~F~C~~~g~CI~~~~~CDg~~DC~DgSDE~~-C~ 40 (42)
T 1cr8_A 3 GCHTDEFQCRLDGLCIPLRWRCDGDTDCMDSSDEKS-CE 40 (42)
T ss_dssp CSSTTCEECTTTCCEECGGGSSSSSCCSSSSTTTTT-CC
T ss_pred CCCCCceEeCCCCeEcChhhcCCCCcCCCCCCcccC-CC
Confidence 466778888754478888888888888888888876 53
No 35
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.90 E-value=5.6e-10 Score=76.09 Aligned_cols=36 Identities=39% Similarity=0.890 Sum_probs=32.8
Q ss_pred cCCCCeeeCC-CCCeecCccccCCCCCCCCCCCCCCCCcccc
Q psy14262 5 CFNGQVQCAL-SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 45 (482)
Q Consensus 5 C~~~~f~C~~-~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~ 45 (482)
|.+++|+|.+ +++|||..|+|||+.||+ |+|||.+|
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~-----dgsDE~~C 37 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCD-----SGEDEENC 37 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCST-----TTTTSTTC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCc-----CCcccccC
Confidence 7889999984 499999999999999998 99999876
No 36
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.89 E-value=4.7e-10 Score=79.80 Aligned_cols=40 Identities=38% Similarity=0.806 Sum_probs=35.9
Q ss_pred CcccCCCCeeeCC----CCCeecCccccCCCCCCCCCCCCCCCCccccc
Q psy14262 2 IHQCFNGQVQCAL----SKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 46 (482)
Q Consensus 2 ~~~C~~~~f~C~~----~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~ 46 (482)
...|.+++|+|.+ +++|||..|+|||+.||. |+|||..|.
T Consensus 2 ~~~C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC~-----DgSDE~~C~ 45 (47)
T 1jrf_A 2 SSRCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCD-----DGRDEWGCG 45 (47)
T ss_dssp CCCCCCCCSCSSSCSCCCTTTSGGGGSSSSSCCSS-----SSCTTHHHH
T ss_pred CCCCCCCeeECCCCCCCCCeEcCHhhcCCCCcCCC-----CCcccccCC
Confidence 3579999999985 799999999999999998 999998763
No 37
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.88 E-value=9e-10 Score=96.41 Aligned_cols=75 Identities=36% Similarity=0.785 Sum_probs=37.4
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCccc-c-cccc-CCCCCCceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVD-A-DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~d-i-~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
+|..++|.+ +|+++.++|+|.|++|| .+..|.+ + ++|. .+++|.+.|+++.++|+|.|++||+|..++++|.+
T Consensus 44 ~C~~~pC~n~g~C~~~~~~y~C~C~~G~--~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 44 QCETSPCQNQGKCKDGLGEYTCTCLEGF--EGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp ---------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEE
T ss_pred cCCCCCCCCcCCcccCCCCEEeeCCCCc--cCCccccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCc
Confidence 676667765 89999999999999999 5778987 6 8898 35789889999999999999999999999999998
Q ss_pred CC
Q psy14262 456 VN 457 (482)
Q Consensus 456 id 457 (482)
++
T Consensus 122 ~~ 123 (134)
T 2vh0_B 122 TG 123 (134)
T ss_dssp SS
T ss_pred CC
Confidence 86
No 38
>1ajj_A LR5, low-density lipoprotein receptor; LDL receptor, cysteine-rich module, calcium; 1.70A {Homo sapiens} SCOP: g.12.1.1
Probab=98.87 E-value=9.6e-10 Score=74.05 Aligned_cols=34 Identities=41% Similarity=0.851 Sum_probs=18.1
Q ss_pred CCCCCeecCCCCceecCCcccCCCCCCCCCCCCCC
Q psy14262 165 CHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199 (482)
Q Consensus 165 C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~ 199 (482)
|.+.+|+|.++ +||+.+|+|||+.||.|||||.+
T Consensus 2 C~~~~f~C~~g-~Ci~~~~~CDg~~DC~DgsDE~~ 35 (37)
T 1ajj_A 2 CSAFEFHCLSG-ECIHSSWRCDGGPDCKDKSDEEN 35 (37)
T ss_dssp CCTTCEECTTS-CEECGGGTTSSSCCSTTCGGGTT
T ss_pred CCCCceEcCCC-CeechhhccCCCCCCCCCccccC
Confidence 44455555544 45555555555555555555554
No 39
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.87 E-value=1.8e-10 Score=98.54 Aligned_cols=99 Identities=33% Similarity=0.745 Sum_probs=76.0
Q ss_pred ccCCCCccccc---ccccCCCCCCCCCCCCCC----CCCCCCCccCCCCcCCCCCCCCCccccCCCCc-cCCCCCccccc
Q psy14262 346 RCGSSNQCVAL---SKFCDGKPDCSNGEDEGP----FCNNKADCENLKCSHKCSPTPRGAMCFCPAGQ-NPNKTQCVDAD 417 (482)
Q Consensus 346 ~C~~g~~Ci~~---~~~CDg~~dC~dgsDE~~----~C~~~~~C~~~~C~~~C~~~~~~~~C~C~~G~-~~~~~~C~di~ 417 (482)
+|.+ +|++. +|+| .|+.|+.... .|.. +|.+++|.++|++ .++|+|.|++|| ...++.|++|+
T Consensus 11 pC~~--~C~~~~~g~y~C----~C~~Gy~g~~~~~~~C~~--~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~g~~C~did 81 (118)
T 1dx5_I 11 NCEY--QCQPLDQTSYLC----VCAEGFAPIPHEPHRCQM--FCNQTACPADCDP-NTQASCECPEGYILDDGFICTDID 81 (118)
T ss_dssp CCSS--EEEECSSSCEEE----ECCTTEEEETTEEEEEEE--CCCSSEEECEECT-TSTTCEECCTTEEEETTTEEEECC
T ss_pred CCCC--CCCCCCCCCEEe----ECCCCccccCCCCCcccc--ccCCCCCCCcccC-CCCeEeECCCCccCCCCCcccccc
Confidence 5653 77765 6888 8988864432 1332 3556778788988 589999999999 22288999999
Q ss_pred cccCCCCCCceeeecCCceEEecCCCeEECCC-CCcc
Q psy14262 418 ECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPD-GKSC 453 (482)
Q Consensus 418 eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d-~~tC 453 (482)
||...++|.+.|+|++|+|+|.|++||++..+ +++|
T Consensus 82 eC~~~~~C~~~C~n~~g~y~C~C~~G~~g~~~~g~~C 118 (118)
T 1dx5_I 82 ECENGGFCSGVCHNLPGTFECICGPDSALAGQIGTDC 118 (118)
T ss_dssp HHHHCSSCSSEEEECSSSEEEEECSSSSCEEEESCCC
T ss_pred ccCCCCCCcCeEEeCCCCEEEECCCCCccCCCCCCCC
Confidence 99854789899999999999999999987765 5554
No 40
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.86 E-value=1.1e-09 Score=96.78 Aligned_cols=81 Identities=30% Similarity=0.712 Sum_probs=67.4
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCccc-cccc---c-CCCCCCceeeecCC-ceEEecCCCeEECCCCCc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVD-ADEC---L-IDGSCDQTCTNTHL-SYVCSCTEGYTLRPDGKS 452 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~d-i~eC---~-~~~~Cs~~C~n~~g-sy~C~C~~Gy~l~~d~~t 452 (482)
+|..++|.+ +|+++.++|+|.|++|| .++.|.+ +++| . ..+.|.+.|+++.+ +|+|.|++||.|..++++
T Consensus 49 ~C~~~pC~n~g~C~~~~g~y~C~C~~G~--~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~ 126 (142)
T 2c4f_L 49 QCASSPCQNGGSCKDQLQSYICFCLPAF--EGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVS 126 (142)
T ss_dssp GGGGCCCCTTCEEEEETTEEEEECCTTE--ESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSC
T ss_pred cCcCCCcCCCCEEeCCCCCEEeeCCCCc--cCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCC
Confidence 666667765 79999999999999999 5778976 5664 3 35778889999999 999999999999999999
Q ss_pred cccCCC--CCCCC
Q psy14262 453 CTAVNV--PQDEP 463 (482)
Q Consensus 453 C~dide--c~~~p 463 (482)
|.++++ |.+.|
T Consensus 127 C~~~~e~pCg~~p 139 (142)
T 2c4f_L 127 CTPTVEYPCGKIP 139 (142)
T ss_dssp EEESSSSCTTCCT
T ss_pred CCCCCccCCCCCC
Confidence 999886 44444
No 41
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.86 E-value=6.6e-10 Score=79.33 Aligned_cols=38 Identities=37% Similarity=0.731 Sum_probs=34.9
Q ss_pred cccCCCCeeeCCCC-CeecCccccCCCCCCCCCCCCCCCCccccc
Q psy14262 3 HQCFNGQVQCALSK-KCIPHNWLCDEEMDCSTDDIVDNTDEDWDK 46 (482)
Q Consensus 3 ~~C~~~~f~C~~~~-~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~ 46 (482)
..|.+++|+|. |+ +|||..|+|||+.||. |+|||..|.
T Consensus 5 ~~C~~~~F~C~-~g~~CI~~~~~CDG~~DC~-----DgSDE~~C~ 43 (48)
T 2i1p_A 5 LNCTSAQFKCA-DGSSCINSRYRCDGVYDCR-----DNSDEAGCP 43 (48)
T ss_dssp CCCCSSSEECS-SSSCEECGGGSSSSSCCSS-----SSHHHHSSC
T ss_pred CCCCCCeeECC-CCCEeCCHhhcCCCCCCCC-----CCcccccCC
Confidence 57999999999 77 8999999999999998 999998774
No 42
>2i1p_A Low-density lipoprotein receptor-related protein 2; cysteine-rich repeat, ligand binding domain, calcium CAGE, ligand binding protein; NMR {Rattus norvegicus}
Probab=98.86 E-value=5.2e-10 Score=79.89 Aligned_cols=42 Identities=26% Similarity=0.710 Sum_probs=30.2
Q ss_pred CCCCccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCCCCC
Q psy14262 159 SHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCN 202 (482)
Q Consensus 159 ~c~~~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~ 202 (482)
.|+ ..|.+.+|+|.++.+||+.+|+|||+.||.|||||.+ |.
T Consensus 2 ~C~-~~C~~~~F~C~~g~~CI~~~~~CDG~~DC~DgSDE~~-C~ 43 (48)
T 2i1p_A 2 AMV-LNCTSAQFKCADGSSCINSRYRCDGVYDCRDNSDEAG-CP 43 (48)
T ss_dssp CSC-CCCCSSSEECSSSSCEECGGGSSSSSCCSSSSHHHHS-SC
T ss_pred CCC-CCCCCCeeECCCCCEeCCHhhcCCCCCCCCCCccccc-CC
Confidence 344 4577777777776568877788888888888887776 64
No 43
>2kny_A LRP-1, linker, APO-E; lipoprotein receptor, ligand binding module, COMP repeat, calcium, cell membrane, coated PIT, cytoplasm, DEVE protein; NMR {Homo sapiens}
Probab=98.85 E-value=7e-10 Score=87.94 Aligned_cols=61 Identities=30% Similarity=0.593 Sum_probs=52.1
Q ss_pred CCCCCCceecC-CCCeeccCCCCCCCcCCCCCCCCCCC---cc-cccccCCccccCCC--CceecCCCcc
Q psy14262 203 AECTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPN---TC-IHQCFNGQVQCALS--KKCIPHNWLC 265 (482)
Q Consensus 203 ~~C~~~~f~C~-~g~Ci~~~~~CDg~~dC~~dgsDE~~---C~-~~~C~~~~f~C~~~--g~Ci~~~~~C 265 (482)
..|.+++|+|. +|+|||.+|+|||+.|| .|||||.. |. ...|.+.+|+|. + +.||+..+..
T Consensus 7 ~~C~~~~f~C~~~g~CIp~~~~CDg~~DC-~DgsDE~~~~~C~~~~~C~~~~f~c~-~~~~~ci~~~~~g 74 (80)
T 2kny_A 7 KTCGPSSFSCPGTHVCVPERWLCDGDKDC-ADGADESIAAGCLYNSTGSGSGSGST-EELRVRLASHLRK 74 (80)
T ss_dssp CCCSSSEEECTTSSCEEEHHHHTTSSCCS-SSSTTTSGGGTCSSSSTTTTCSSCHH-HHHHHHTTTTTTT
T ss_pred CCCCCCceecCCCCeEcChhhcCCCCCCC-CCCCccccccCCCCCcccCcccchhh-hHHHHHHHHHHHH
Confidence 56889999998 68999999999999999 99999984 65 356888999998 6 6888876654
No 44
>3dpr_E LDL-receptor class A 3; human rhinovirus, VLDL-receptor, virus-protein complex, icosahedral virus, ATP-binding, capsid protein; HET: DAO; 3.50A {Homo sapiens} PDB: 1v9u_5*
Probab=98.82 E-value=2e-09 Score=73.33 Aligned_cols=37 Identities=49% Similarity=1.108 Sum_probs=28.2
Q ss_pred CCCCCeecCC-CCceecCCcccCCCCCCCCCCCCCCCCC
Q psy14262 165 CHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEGPFCN 202 (482)
Q Consensus 165 C~~~~f~C~~-~~~Ci~~~~~CDg~~dC~dgsDE~~~C~ 202 (482)
|.+.+|+|.+ .++|||.+|+|||+.||.|||||.+ |.
T Consensus 1 C~~~~f~C~~~~g~Cip~~~~CDg~~DC~dgsDE~~-C~ 38 (39)
T 3dpr_E 1 CRIHEISCGAHSTQCIPVSWRCDGENDCDSGEDEEN-CG 38 (39)
T ss_dssp CCTTTCCCSSSSSCCCCTTSSSSSSCCSTTTTTSTT-CC
T ss_pred CCCCceecCCCCCCEeCccccCCCcccCcCCccccc-CC
Confidence 4567888876 2478888888888888888888876 53
No 45
>1d2l_A Lipoprotein receptor related protein; ligand binding, calcium binding, complement-like repeat, signaling protein; NMR {Homo sapiens} SCOP: g.12.1.1
Probab=98.82 E-value=2e-09 Score=75.58 Aligned_cols=36 Identities=39% Similarity=0.918 Sum_probs=29.2
Q ss_pred ccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199 (482)
Q Consensus 163 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~ 199 (482)
..|.+.+|+|.++ +||+.+|+|||+.||.|||||.+
T Consensus 4 ~~C~~~~F~C~~g-~CI~~~~~CDG~~DC~DgSDE~~ 39 (45)
T 1d2l_A 4 PQCQPGEFACANS-RCIQERWKCDGDNDCLDNSDEAP 39 (45)
T ss_dssp CBTTBTCEEETTT-EEECGGGTTTSSCTTTTCSTTST
T ss_pred CcCCCCceEcCCC-CeEehhhccCCCCCCCCCCCCCC
Confidence 3567788888876 78888888888888888888886
No 46
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.81 E-value=1.7e-10 Score=106.57 Aligned_cols=139 Identities=23% Similarity=0.593 Sum_probs=100.7
Q ss_pred ccCCCCccC--CCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccCC--CcccCCCCccccc-------ccccCCCC
Q psy14262 296 QCALSKKCI--PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPN--ELRCGSSNQCVAL-------SKFCDGKP 364 (482)
Q Consensus 296 ~C~~g~~Ci--~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~~--~f~C~~g~~Ci~~-------~~~CDg~~ 364 (482)
.|.++ +|+ +.+|+| .|..||.+. +... |.. ...|... ..+|.++++|++. +|+|
T Consensus 12 pC~ng-~C~~~~g~~~C----~C~~G~~g~--~~~~---C~~-id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C---- 76 (186)
T 1z1y_A 12 ICXNG-QLVQMSNHFXC----MCNEGLVHL--SENT---CEE-XNECXXETLGXACGEFGQCIENPDPAQVNMYXC---- 76 (186)
T ss_dssp CCBTE-EEEECSSCEEE----EECTTEEEE--ETTE---EEE-CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEE----
T ss_pred CCCCC-EeECCCCCeEe----ECCCCCccC--CCCc---cCC-CCcccCCCCCCCCCCCCEeecCCCCcCCCCEEC----
Confidence 46655 787 467889 799666443 3333 642 3567543 4578887789865 4788
Q ss_pred CCCCCCCCCC-CCCCCCCccCCCCcC--CCC----CCCCCccccCCCCccC---CCCCcccc--ccccCCCCC---Ccee
Q psy14262 365 DCSNGEDEGP-FCNNKADCENLKCSH--KCS----PTPRGAMCFCPAGQNP---NKTQCVDA--DECLIDGSC---DQTC 429 (482)
Q Consensus 365 dC~dgsDE~~-~C~~~~~C~~~~C~~--~C~----~~~~~~~C~C~~G~~~---~~~~C~di--~eC~~~~~C---s~~C 429 (482)
.|+.|+.... .|.++ +|...+|.+ +|+ ++.++|+|.|++||.. ++..|+++ ++|. .+| .+.|
T Consensus 77 ~C~~G~~g~~~~C~~d-~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~--~~C~~~~~~C 153 (186)
T 1z1y_A 77 GCIEGYTLXEDTCVLD-VCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ--LXCNTDNEVC 153 (186)
T ss_dssp EECTTEEEETTEEEEG-GGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC--CCCCTTTEEE
T ss_pred CCCCCCccCCCCCCCC-cCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc--ccccccCcce
Confidence 8999875442 15555 888777863 677 8888999999999932 66889876 7887 478 4689
Q ss_pred eecCCceEEecCCCeEECCCCCc
Q psy14262 430 TNTHLSYVCSCTEGYTLRPDGKS 452 (482)
Q Consensus 430 ~n~~gsy~C~C~~Gy~l~~d~~t 452 (482)
+++.++|+|.|++||++....+.
T Consensus 154 ~n~~g~y~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 154 XNVEGVYXCQCMEGFTFDXEXNV 176 (186)
T ss_dssp EEETTEEEEEECTTCEEETTTTE
T ss_pred ecCCCCeeeECCCCCccCccccc
Confidence 99999999999999998655444
No 47
>2knx_A Prolow-density lipoprotein receptor-related prote; LDLR, ligand binding module, ligand binding repeat, compleme repeat, protein binding; NMR {Homo sapiens}
Probab=98.81 E-value=2.2e-09 Score=77.19 Aligned_cols=42 Identities=33% Similarity=0.789 Sum_probs=32.7
Q ss_pred ccCCCCCeecC-CCCceecCCcccCCCCCCCCCCCCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTP 207 (482)
Q Consensus 163 ~~C~~~~f~C~-~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~C~~ 207 (482)
..|.+.+|+|. ++ +||+..|+|||+.||.|||||.+ |. .|.+
T Consensus 5 ~~C~~~~F~C~~~g-~CI~~~~~CDG~~DC~DgSDE~~-C~-~C~~ 47 (50)
T 2knx_A 5 KTCGPSSFSCPGTH-VCVPERWLCDGDKDCADGADESI-AA-GCLY 47 (50)
T ss_dssp CTTCTTEEEETTTT-EEEETTTTTSSSCCSTTCGGGSG-GG-TCCC
T ss_pred CCCCCCcEEcCCCC-eEcChhhcCCCCCCCCCCCcccc-cc-CCCC
Confidence 35778888885 55 89998899999999999999887 64 4543
No 48
>2jm4_A Relaxin receptor 1; LDL-A module, RXFP1 receptor, LGR7, signaling protein; NMR {Homo sapiens}
Probab=98.80 E-value=3.2e-09 Score=73.91 Aligned_cols=37 Identities=32% Similarity=0.728 Sum_probs=20.8
Q ss_pred ccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199 (482)
Q Consensus 163 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~ 199 (482)
..|.+.+|+|.++++||+..|+|||+.||.|||||.+
T Consensus 5 ~~C~~~~f~C~~~g~CI~~~~~CDg~~DC~DgSDE~~ 41 (43)
T 2jm4_A 5 VKCSLGYFPCGNITKCLPQLLHCNGVDDCGNQADEDN 41 (43)
T ss_dssp CSCCTTEEECSSSSCEEEGGGTTSSCCCSSSCCTTSS
T ss_pred CCCCCCeeECCCCCeEcCHhhccCCCCCCCCCcccCC
Confidence 4455555555552255555555555555555555554
No 49
>3a7q_B Low-density lipoprotein receptor-related protein; signaling protein; HET: NAG; 2.60A {Homo sapiens}
Probab=98.80 E-value=3e-09 Score=74.49 Aligned_cols=35 Identities=46% Similarity=1.012 Sum_probs=19.7
Q ss_pred CCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCCc
Q psy14262 205 CTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNT 240 (482)
Q Consensus 205 C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C 240 (482)
|...+|+|.+|+||+..|+|||+.|| .|||||.+|
T Consensus 8 C~~~~f~C~~g~CI~~~~~CDg~~DC-~DgSDE~~C 42 (44)
T 3a7q_B 8 CEKDQFQCRNERCIPSVWRCDEDDDC-LDHSDEDDC 42 (44)
T ss_dssp CCTTEEECTTSCEEEGGGTTSSSCCS-SSSTTTSCC
T ss_pred CCCCceEcCCCCEeChhhccCCCCCC-CCCccccCC
Confidence 44555555555555555555555555 555555544
No 50
>2m0p_A Low-density lipoprotein receptor-related protein; complement type repeat, megalin, LDL receptor FAMI lipid binding protein; NMR {Homo sapiens}
Probab=98.78 E-value=1.2e-09 Score=78.71 Aligned_cols=36 Identities=31% Similarity=0.756 Sum_probs=25.8
Q ss_pred ccCCCCCeecCCCCceecCCcccCCCCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 199 (482)
Q Consensus 163 ~~C~~~~f~C~~~~~Ci~~~~~CDg~~dC~dgsDE~~ 199 (482)
..|.+.+|+|.+| +||+.+|+|||..||.|||||.+
T Consensus 5 ~~C~~~~F~C~nG-~CIp~~~~CDG~~DC~DgSDE~~ 40 (52)
T 2m0p_A 5 ASCLDTQYTCDNH-QCISKNWVCDTDNDCGDGSDEKN 40 (52)
T ss_dssp CSSCSSEEECTTC-CEEETTSTTSSSCSSSSCHHHHS
T ss_pred CCCCCCceECCCC-CEEecCccCCCCCCCCCCCcccc
Confidence 3466677777766 67777777777777777777765
No 51
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.73 E-value=1.7e-08 Score=100.73 Aligned_cols=78 Identities=31% Similarity=0.731 Sum_probs=68.6
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCcc-ccccccC--CCCCCceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCV-DADECLI--DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~-di~eC~~--~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
+|.+.+|.+ +|.++.++|+|.|++|| .++.|+ +++||.. ..+|.+.|+|+.++|+|.|++||.+..++++|.+
T Consensus 7 ~C~~~pC~~~g~C~~~~~~~~C~C~~g~--~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~ 84 (317)
T 3h5c_B 7 PCISQPCLHNGSCQDSIWGYTCTCSPGY--EGSNCELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVP 84 (317)
T ss_dssp CTTSCCCTTTCCCCCCSSSCCCCCSSSC--CSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEE
T ss_pred cCCCCCCCCCCEeECCCCCeEEECCCCC--cCCccccCcccCCCCCCCCCcCccccCCCeeEEecccccccccccccccc
Confidence 566666765 79999999999999999 678898 9999984 3789889999999999999999999999999999
Q ss_pred CCCCC
Q psy14262 456 VNVPQ 460 (482)
Q Consensus 456 idec~ 460 (482)
+++|.
T Consensus 85 ~~~c~ 89 (317)
T 3h5c_B 85 HDQCA 89 (317)
T ss_dssp CSSCC
T ss_pred ccccc
Confidence 98874
No 52
>1k7b_A Subgroup A ROUS sarcoma virus receptor PG800 and PG950; beta hairpin, 3-10 helix, calcium binding, membrane protein; NMR {Coturnix coturnix} SCOP: g.12.1.1
Probab=98.72 E-value=5e-09 Score=74.41 Aligned_cols=37 Identities=38% Similarity=0.928 Sum_probs=20.7
Q ss_pred ccCCCCCeecCC----CCceecCCcccCCCCCCCCCCCCCC
Q psy14262 163 VLCHPNELRCGS----SNQCVALSKFCDGKPDCSNGEDEGP 199 (482)
Q Consensus 163 ~~C~~~~f~C~~----~~~Ci~~~~~CDg~~dC~dgsDE~~ 199 (482)
..|.+.+|+|.+ .++|||.+|+|||+.||.|||||.+
T Consensus 5 ~~C~~~~F~C~~~~~~~g~CIp~~~~CDG~~DC~DgSDE~~ 45 (47)
T 1k7b_A 5 GSCPPGQFRCSEPPGAHGECYPQDWLCDGHPDCDDGRDEWG 45 (47)
T ss_dssp -CCSTTEECCSSCTTSCCCCEEGGGSSCSSCCSSSSTTTGG
T ss_pred CCCCCCceEcCCCCCCCCcCCCccccCCCcCCCCCCcccCC
Confidence 445556666652 2256666666666666666666654
No 53
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.70 E-value=1.3e-08 Score=89.62 Aligned_cols=99 Identities=28% Similarity=0.746 Sum_probs=74.7
Q ss_pred ccCCCCccccc----ccccCCCCCCCCCCCCCCCCCC-------------CCCccCCCCcC--CCC-------CCCCCcc
Q psy14262 346 RCGSSNQCVAL----SKFCDGKPDCSNGEDEGPFCNN-------------KADCENLKCSH--KCS-------PTPRGAM 399 (482)
Q Consensus 346 ~C~~g~~Ci~~----~~~CDg~~dC~dgsDE~~~C~~-------------~~~C~~~~C~~--~C~-------~~~~~~~ 399 (482)
+|.++++|++. +++| .|+.|+.... |.. .++|...+|.+ +|+ ++.++|+
T Consensus 7 pC~~~g~C~~~~~~g~~~C----~C~~G~~G~~-C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~ 81 (143)
T 4d90_A 7 PCENGGICLPGLADGSFSC----ECPDGFTDPN-CSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYV 81 (143)
T ss_dssp CCGGGCEEEC-----CCEE----ECCTTCCTTT-TCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEE
T ss_pred cCCCCCEeeCCCCCCCEEe----ECCCCCCCCC-CccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeE
Confidence 57766688764 4778 7888876655 642 12566666765 677 6678999
Q ss_pred ccCCCCccCCCCCcc-ccccccCCCCC--CceeeecCCceEEecCCCeEECCCCCccccC
Q psy14262 400 CFCPAGQNPNKTQCV-DADECLIDGSC--DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 400 C~C~~G~~~~~~~C~-di~eC~~~~~C--s~~C~n~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
|.|++|| .+..|+ ++++|. ..+| .+.|+++.++|+|.|++||+ +..|..+
T Consensus 82 C~C~~G~--~G~~C~~~i~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~c~~~ 134 (143)
T 4d90_A 82 CKCPRGF--NGIHCQHNINECE-VEPCKNGGICTDLVANYSCECPGEFM----GRNCQYK 134 (143)
T ss_dssp EECCTTE--ESTTSCEECCTTT-TCCSCTTCEEEEETTEEEEECCTTCB----STTSCBC
T ss_pred eECcCCC--cCCCcccCCCcCC-CCCCCCCCEeECCCCCeEeECCCCCc----cCCceec
Confidence 9999999 678897 999997 4567 36999999999999999998 5566543
No 54
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=98.68 E-value=1.4e-08 Score=78.26 Aligned_cols=49 Identities=35% Similarity=0.653 Sum_probs=44.2
Q ss_pred ccccccc-CCCCCCceeeecCC-ceEEecCCCeEECCCCCccccCCCCCCC
Q psy14262 414 VDADECL-IDGSCDQTCTNTHL-SYVCSCTEGYTLRPDGKSCTAVNVPQDE 462 (482)
Q Consensus 414 ~di~eC~-~~~~Cs~~C~n~~g-sy~C~C~~Gy~l~~d~~tC~didec~~~ 462 (482)
.+++||. .++.|+|+|+|++| +|+|.|++||+|..++++|.+++||.-.
T Consensus 3 ~d~~eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~Cg 53 (69)
T 1kli_L 3 DDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPCG 53 (69)
T ss_dssp SCCCCTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSCTT
T ss_pred cccccccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCcccccCC
Confidence 5789997 56889999999999 8999999999999999999999987643
No 55
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=98.68 E-value=1.3e-08 Score=74.80 Aligned_cols=47 Identities=38% Similarity=0.743 Sum_probs=41.6
Q ss_pred cccc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCCCC
Q psy14262 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEP 463 (482)
Q Consensus 417 ~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~~p 463 (482)
+||. ..+.|+|.|+|++|+|+|.|++||+|..++++|.+|+||.-..
T Consensus 2 dEC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~cg~ 49 (55)
T 2jkh_L 2 KLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYPCGK 49 (55)
T ss_dssp CCTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSCTTC
T ss_pred ccccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCccccCCC
Confidence 5776 4578999999999999999999999999999999999986544
No 56
>1j8e_A Low-density lipoprotein receptor-related protein 1; ligand binding, calcium binding, complement-like repeat, LRP receptor, signaling protein; 1.85A {Homo sapiens} SCOP: g.12.1.1
Probab=98.63 E-value=8.4e-09 Score=72.16 Aligned_cols=35 Identities=54% Similarity=1.207 Sum_probs=23.6
Q ss_pred CCCCCceecCCCCeeccCCCCCCCcCCCCCCCCCCC
Q psy14262 204 ECTPGQFSCGMGKCIPESWKCDGFVDCLEDGSDEPN 239 (482)
Q Consensus 204 ~C~~~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~ 239 (482)
.|++.+|+|.+|+|||..|+|||+.|| .|||||.+
T Consensus 4 ~C~~~~F~C~~g~CI~~~~~CDg~~DC-~DgSDE~~ 38 (44)
T 1j8e_A 4 SCSSTQFKCNSGRCIPEHWTCDGDNDC-GDYSDETH 38 (44)
T ss_dssp SSCTTEEECTTSCEEEGGGTTSSSCCS-SSSGGGSH
T ss_pred CCCCCceEeCCCCeEecCcccCCCCCC-CCCCCCCC
Confidence 355666777666777777777777777 67777654
No 57
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.60 E-value=2.9e-08 Score=100.33 Aligned_cols=62 Identities=40% Similarity=0.916 Sum_probs=47.8
Q ss_pred cccccCCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCCCCcEEEeccCCceEEEeccC
Q psy14262 416 ADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 416 i~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~~p~~l~~~~~~~ir~~~l~~ 481 (482)
++||..++.|+|.|+|++|+|+|.|++||.|.+++++|++++ ..| +|+|+++++|++++|++
T Consensus 1 i~ec~~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~---~~~-~ll~~~~~~I~~i~~~g 62 (349)
T 3v64_C 1 VNECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALG---PEP-VLLFANRIDIRQVLPHR 62 (349)
T ss_dssp --------CCSSEECCC---CCEECCTTEEECTTSSCEEESS---SCC-EEEEECBSCEEEECTTS
T ss_pred CcccCCCCCCcCeeecCCCCeEEECCCCccCCCCCCcccccc---cCc-eeEeecccceEEEeCCC
Confidence 478876689999999999999999999999999999999988 456 99999999999999876
No 58
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.59 E-value=1.3e-08 Score=90.24 Aligned_cols=106 Identities=31% Similarity=0.654 Sum_probs=73.6
Q ss_pred CcccCCCCccccc--ccccCCCCCCCCCCCCCC---CCCCCC-----------Ccc--CCCCc--CCCCCCCCC------
Q psy14262 344 ELRCGSSNQCVAL--SKFCDGKPDCSNGEDEGP---FCNNKA-----------DCE--NLKCS--HKCSPTPRG------ 397 (482)
Q Consensus 344 ~f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~---~C~~~~-----------~C~--~~~C~--~~C~~~~~~------ 397 (482)
..+|.++ .|++. +|+| .|+.|+.... .|.... .|. ...|. ..|.+..++
T Consensus 9 ~~pC~ng-~C~n~~g~y~C----~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C 83 (147)
T 2w86_A 9 SSPCING-VCKNSPGSFIC----ECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPC 83 (147)
T ss_dssp GCCSBTS-EEEEETTEEEE----ECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTT
T ss_pred CCCCCCC-EeECCCCCEEe----ECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCc
Confidence 3578776 89986 8999 8999964221 132110 111 01111 123333332
Q ss_pred ----ccccCCCCc-cCCCCCcccccccc-CCCCCC-ceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 398 ----AMCFCPAGQ-NPNKTQCVDADECL-IDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 398 ----~~C~C~~G~-~~~~~~C~di~eC~-~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
|.|.|++|| ...++.|++|+||. .++.|. ++|+|++|+|+|.|++||++..++++|.
T Consensus 84 ~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~g~~~~~~C~ 147 (147)
T 2w86_A 84 TLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKCQCPSGMTLDATGRICL 147 (147)
T ss_dssp EECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEEECCTTCCBCTTSSCBC
T ss_pred ccCCCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEeeCCCCCccCCCCCeeC
Confidence 788999999 33578899999998 567796 4999999999999999999999998873
No 59
>1jrf_A TVA LDL-A module, subgroup A ROUS sarcoma virus receptors PG800 and PG950; disulfide bond, alpha helix, calcium CAGE, signaling protein; NMR {Coturnix japonica} SCOP: g.12.1.1
Probab=98.59 E-value=1e-08 Score=72.81 Aligned_cols=35 Identities=54% Similarity=1.336 Sum_probs=19.6
Q ss_pred CCCCceecC-----CCCeeccCCCCCCCcCCCCCCCCCCCc
Q psy14262 205 CTPGQFSCG-----MGKCIPESWKCDGFVDCLEDGSDEPNT 240 (482)
Q Consensus 205 C~~~~f~C~-----~g~Ci~~~~~CDg~~dC~~dgsDE~~C 240 (482)
|.+.+|+|. +++|||.+|+|||+.|| .|||||.+|
T Consensus 5 C~~~~F~C~~~~~~~~~CIp~~~~CDG~~DC-~DgSDE~~C 44 (47)
T 1jrf_A 5 CPPGQFRCSEPPGAHGECYPQDWLCDGHPDC-DDGRDEWGC 44 (47)
T ss_dssp CCCCCSCSSSCSCCCTTTSGGGGSSSSSCCS-SSSCTTHHH
T ss_pred CCCCeeECCCCCCCCCeEcCHhhcCCCCcCC-CCCcccccC
Confidence 455555555 44555555555555555 555555544
No 60
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.58 E-value=1.2e-08 Score=91.90 Aligned_cols=103 Identities=33% Similarity=0.665 Sum_probs=68.6
Q ss_pred ccCCCCccccc--ccccCCCCCCCCCCC----CCCCCCCCCC--ccC--CCC----cCCCCCCCC---------------
Q psy14262 346 RCGSSNQCVAL--SKFCDGKPDCSNGED----EGPFCNNKAD--CEN--LKC----SHKCSPTPR--------------- 396 (482)
Q Consensus 346 ~C~~g~~Ci~~--~~~CDg~~dC~dgsD----E~~~C~~~~~--C~~--~~C----~~~C~~~~~--------------- 396 (482)
+|.++ .|++. +|.| .|+.|+- +.. |...++ |.. .+| ..+|++..+
T Consensus 11 ~C~~~-~C~n~~gsy~C----~C~~Gy~~~~~g~~-C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~ 84 (162)
T 1uzk_A 11 TCISG-NCVNTPGSYIC----DCPPDFELNPTRVG-CVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84 (162)
T ss_dssp SSBTS-EEEEETTEEEE----ECCTTCEECTTSSB-EECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred CCCCC-EeECCCCCEEE----eCCCCCeECCCCCc-ccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence 56644 78876 7888 7888873 444 763224 642 222 224544433
Q ss_pred --------------CccccCCC--Cc--cCCCCCcccccccc-CCCCCC-ceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 397 --------------GAMCFCPA--GQ--NPNKTQCVDADECL-IDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 397 --------------~~~C~C~~--G~--~~~~~~C~di~eC~-~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
+|+|.|++ || ...+..|.+|+||. .+++|. +.|+|++|+|+|.|++||++..++++|+
T Consensus 85 ~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~C~~Gy~g~~d~~~C~ 162 (162)
T 1uzk_A 85 WGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCRCPTGYYLNEDTRVCD 162 (162)
T ss_dssp ETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEECCTTCCBCTTTCBBC
T ss_pred cCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEeeCCCCccCCCCCCccC
Confidence 44555554 55 23346789999998 456786 5999999999999999999999999884
No 61
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.55 E-value=5.1e-09 Score=96.59 Aligned_cols=109 Identities=28% Similarity=0.610 Sum_probs=83.3
Q ss_pred CcccCCCCccccc--ccccCCCCCCCCCCCC---CCCCCCCCCcc----CCCCcC--CCCCCC-----CCccccCCCCcc
Q psy14262 344 ELRCGSSNQCVAL--SKFCDGKPDCSNGEDE---GPFCNNKADCE----NLKCSH--KCSPTP-----RGAMCFCPAGQN 407 (482)
Q Consensus 344 ~f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE---~~~C~~~~~C~----~~~C~~--~C~~~~-----~~~~C~C~~G~~ 407 (482)
..+|.++ +|++. +++| .|+.|+.. .. |...++|. ..+|.+ +|+++. ++|+|.|++||.
T Consensus 10 ~~pC~ng-~C~~~~g~~~C----~C~~G~~g~~~~~-C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~ 83 (186)
T 1z1y_A 10 DTICXNG-QLVQMSNHFXC----MCNEGLVHLSENT-CEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYT 83 (186)
T ss_dssp TCCCBTE-EEEECSSCEEE----EECTTEEEEETTE-EEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEE
T ss_pred CCCCCCC-EeECCCCCeEe----ECCCCCccCCCCc-cCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCc
Confidence 3478877 88876 7888 89988743 24 76334887 677874 899988 899999999993
Q ss_pred CCCCCccccccccCCCCCC--ceee----ecCCceEEecCCCeEECC-CCCccccC--CCCC
Q psy14262 408 PNKTQCVDADECLIDGSCD--QTCT----NTHLSYVCSCTEGYTLRP-DGKSCTAV--NVPQ 460 (482)
Q Consensus 408 ~~~~~C~di~eC~~~~~Cs--~~C~----n~~gsy~C~C~~Gy~l~~-d~~tC~di--dec~ 460 (482)
.....|. +++|. ..+|. +.|+ ++.++|+|.|++||++.. +++.|+++ ++|.
T Consensus 84 g~~~~C~-~d~C~-~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~ 143 (186)
T 1z1y_A 84 LXEDTCV-LDVCQ-YXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQ 143 (186)
T ss_dssp EETTEEE-EGGGT-TCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEECCCCC
T ss_pred cCCCCCC-CCcCc-CCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCCCccc
Confidence 3334676 78997 34574 5787 888999999999999855 67899876 7776
No 62
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.55 E-value=1.1e-07 Score=102.71 Aligned_cols=111 Identities=26% Similarity=0.589 Sum_probs=86.2
Q ss_pred cccCCCCccccc---ccccCCCCCCCCCCCC--CCCCCCCCCccCCC--CcC-----CCCCCCCCcccc-CCCCccC---
Q psy14262 345 LRCGSSNQCVAL---SKFCDGKPDCSNGEDE--GPFCNNKADCENLK--CSH-----KCSPTPRGAMCF-CPAGQNP--- 408 (482)
Q Consensus 345 f~C~~g~~Ci~~---~~~CDg~~dC~dgsDE--~~~C~~~~~C~~~~--C~~-----~C~~~~~~~~C~-C~~G~~~--- 408 (482)
.+|.++.+|++. +|+|- .|+.|+.. .. |...+||...+ |.+ +|+++.++|+|. |++||..
T Consensus 9 nPC~~gg~C~n~~~Gsy~C~---~C~~GytGdg~~-CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c 84 (634)
T 1yo8_A 9 NPCFPGAQCSSFPDGSWSCG---FCPVGFLGNGTH-CEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQP 84 (634)
T ss_dssp CCSCTTCCEEECTTSCEEEC---CCCTTBCSCSSS-CCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCC
T ss_pred CCCCCCCEEecCCCCCeECC---cCCCccCCCCCC-ccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcc
Confidence 368887789875 37782 48888754 44 87444898554 875 799999999998 9999921
Q ss_pred ----------CCCCcccccccc-CCCCCC--ceeeecC----CceEEecCCCeEECCCCCccc---cCCCCCC
Q psy14262 409 ----------NKTQCVDADECL-IDGSCD--QTCTNTH----LSYVCSCTEGYTLRPDGKSCT---AVNVPQD 461 (482)
Q Consensus 409 ----------~~~~C~di~eC~-~~~~Cs--~~C~n~~----gsy~C~C~~Gy~l~~d~~tC~---didec~~ 461 (482)
.++.|.++++|. ..++|. +.|+++. ++|+|.|++||.. ++++|. +|+||..
T Consensus 85 ~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G--dG~~Ce~d~DiDeC~~ 155 (634)
T 1yo8_A 85 VGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG--DGLICGEDSDLDGWPN 155 (634)
T ss_dssp EESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE--SSSSEEECTTSSSSCS
T ss_pred ccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccc--cCcccccccCcccccC
Confidence 345699999998 357895 6899999 9999999999984 468896 7888853
No 63
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.54 E-value=6.5e-09 Score=88.85 Aligned_cols=78 Identities=26% Similarity=0.663 Sum_probs=61.6
Q ss_pred CccCCCCcCCCCCC-CCCccccCCCCccCCCCCcccccccc---CCCCCCceeeecCCceEEecCCCeEECCCCCccccC
Q psy14262 381 DCENLKCSHKCSPT-PRGAMCFCPAGQNPNKTQCVDADECL---IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 381 ~C~~~~C~~~C~~~-~~~~~C~C~~G~~~~~~~C~di~eC~---~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
+|.+++|.++|+++ .++|+|.|++||... .+ ++++|. ..++|.+.|++ .++|+|.|++||++.. +++|++|
T Consensus 6 eC~~~pC~~~C~~~~~g~y~C~C~~Gy~g~--~~-~~~~C~~~C~~~~C~~~C~~-~~~y~C~C~~Gy~~~~-g~~C~di 80 (118)
T 1dx5_I 6 PCFRANCEYQCQPLDQTSYLCVCAEGFAPI--PH-EPHRCQMFCNQTACPADCDP-NTQASCECPEGYILDD-GFICTDI 80 (118)
T ss_dssp GGGGCCCSSEEEECSSSCEEEECCTTEEEE--TT-EEEEEEECCCSSEEECEECT-TSTTCEECCTTEEEET-TTEEEEC
T ss_pred cCCCCCCCCCCCCCCCCCEEeECCCCcccc--CC-CCCccccccCCCCCCCcccC-CCCeEeECCCCccCCC-CCccccc
Confidence 78778898899999 899999999999211 11 344443 25677788998 5999999999999876 8899999
Q ss_pred CCCCC-CC
Q psy14262 457 NVPQD-EP 463 (482)
Q Consensus 457 dec~~-~p 463 (482)
+||+. .|
T Consensus 81 deC~~~~~ 88 (118)
T 1dx5_I 81 DECENGGF 88 (118)
T ss_dssp CHHHHCSS
T ss_pred cccCCCCC
Confidence 99876 44
No 64
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=98.49 E-value=6.9e-08 Score=69.74 Aligned_cols=41 Identities=37% Similarity=0.712 Sum_probs=37.4
Q ss_pred CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 421 IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 421 ~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
.++.|+|.|+|++|+|+|.|++||+|..++++|.+|+|+.-
T Consensus 4 ~ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~pC 44 (51)
T 1kig_L 4 DNGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFPC 44 (51)
T ss_dssp TTTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSCT
T ss_pred CCCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCcccC
Confidence 35789999999999999999999999999999999998753
No 65
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.49 E-value=1.5e-07 Score=101.63 Aligned_cols=82 Identities=34% Similarity=0.732 Sum_probs=67.9
Q ss_pred CccCCCCcC--CCCCCCCC-ccc-cCCCCccCCCCCcccccccc-CCCCCCc-----eeeecCCceEEe-cCCCeEECC-
Q psy14262 381 DCENLKCSH--KCSPTPRG-AMC-FCPAGQNPNKTQCVDADECL-IDGSCDQ-----TCTNTHLSYVCS-CTEGYTLRP- 448 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~-~~C-~C~~G~~~~~~~C~di~eC~-~~~~Cs~-----~C~n~~gsy~C~-C~~Gy~l~~- 448 (482)
+|..++|.+ +|+++.++ |+| .|++||...+++|++++||. .++.|.+ .|+|+.++|+|. |++||+...
T Consensus 5 eC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c 84 (634)
T 1yo8_A 5 GCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQP 84 (634)
T ss_dssp GGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCC
T ss_pred ccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcc
Confidence 677677875 89988865 999 99999965668999999998 4556954 899999999998 999999653
Q ss_pred ----------CCCccccCCCCCCC
Q psy14262 449 ----------DGKSCTAVNVPQDE 462 (482)
Q Consensus 449 ----------d~~tC~didec~~~ 462 (482)
++++|++|+||...
T Consensus 85 ~g~g~~~~~~dg~~C~dideC~~~ 108 (634)
T 1yo8_A 85 VGVGLEAAKTEKQVCEPENPCKDK 108 (634)
T ss_dssp EESSSHHHHSCCCCEEECCTTTTT
T ss_pred ccccccccccCCCcccccccccCC
Confidence 45679999999853
No 66
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.47 E-value=1.9e-07 Score=81.44 Aligned_cols=76 Identities=30% Similarity=0.763 Sum_probs=62.2
Q ss_pred Ccc--CCCCcC--CCCCCCCCccccCCCCccCCCCCcc-ccccccCCCCCC--ceeeecCCceEEecCCCeEECCCCCcc
Q psy14262 381 DCE--NLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCV-DADECLIDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSC 453 (482)
Q Consensus 381 ~C~--~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~-di~eC~~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC 453 (482)
+|. .++|.+ +|+++.++|+|.|++|| .+..|. ++++|. ..+|. +.|+++.++|+|.|++||. +..|
T Consensus 7 eC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy--~G~~C~~~~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~----G~~C 79 (135)
T 2vj3_A 7 ECSLGANPCEHAGKCINTLGSFECQCLQGY--TGPRCEIDVNECV-SNPCQNDATCLDQIGEFQCICMPGYE----GVHC 79 (135)
T ss_dssp TTTSSSCSSSTTCEEEECSSSEEEECCTTE--ESTTSCEECCTTT-TCCCCSSCEEEECSSCEEEECCTTEE----SSSS
T ss_pred cccCCCCCCCCCCEeECCCCCEEEECCCCC--cCCcccccCccCC-CCCCCCCCEEeCCCCCceeeCCCCCc----CCcc
Confidence 666 567765 79999999999999999 556784 789997 45673 6899999999999999998 6678
Q ss_pred c-cCCCCCCCC
Q psy14262 454 T-AVNVPQDEP 463 (482)
Q Consensus 454 ~-didec~~~p 463 (482)
. ++++|...|
T Consensus 80 ~~~~~~C~~~~ 90 (135)
T 2vj3_A 80 EVNTDECASSP 90 (135)
T ss_dssp CEECCTTTTCC
T ss_pred eecCCcccCCC
Confidence 5 788887654
No 67
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=98.46 E-value=1.1e-07 Score=69.18 Aligned_cols=41 Identities=37% Similarity=0.720 Sum_probs=37.3
Q ss_pred CCCCCCceeeecCC-ceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 421 IDGSCDQTCTNTHL-SYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 421 ~~~~Cs~~C~n~~g-sy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
.++.|+|.|+|++| +|+|.|++||+|..++++|.+++||.-
T Consensus 5 ~nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~c 46 (53)
T 2bz6_L 5 ENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYPC 46 (53)
T ss_dssp GGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSCT
T ss_pred CCCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCccccC
Confidence 35789999999999 799999999999999999999998753
No 68
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.37 E-value=2e-07 Score=86.31 Aligned_cols=57 Identities=26% Similarity=0.698 Sum_probs=45.0
Q ss_pred ccCCCCCeecC-CCCceecCCcccCCCCCCCCCCCCC--CCCC-C-CCCCCce--ecCCCCeecc
Q psy14262 163 VLCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEG--PFCN-A-ECTPGQF--SCGMGKCIPE 220 (482)
Q Consensus 163 ~~C~~~~f~C~-~~~~Ci~~~~~CDg~~dC~dgsDE~--~~C~-~-~C~~~~f--~C~~g~Ci~~ 220 (482)
..|.+.+|+|. +.++||+..|+|||..||+|||||. + |. . +|.+.+| +|.++.|+..
T Consensus 51 ~~C~~~eFqC~~~~g~CIp~~wvCDG~~DC~DGSDE~~~~-C~~~~tc~~~qF~g~~~~d~C~kr 114 (220)
T 2gtl_N 51 THCEKRTFQCGGNEQECISDLLVCDGHKDCHNAHDEDPDV-CDTSVVKAGNVFSGTSTWHGCLAR 114 (220)
T ss_dssp CSSCTTEEECCSSSCCEEETTTTTSSSCCSTTCTTSCGGG-GCGGGGCTTCEEEEEEEECSSCCC
T ss_pred CCCCCCccCcCCCCCcEeCcceecCCCCCCCCCCccCccc-CCCCCccCCcceeeEecCChhhcC
Confidence 45888999996 3348999999999999999999996 6 86 3 6766654 5777777643
No 69
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.33 E-value=5e-07 Score=73.37 Aligned_cols=79 Identities=25% Similarity=0.604 Sum_probs=61.2
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCcCCCCCCCCCccccCCCCccCCCCCcc--ccccccCCCCCC--ceeeecC--CceEE
Q psy14262 365 DCSNGEDEGPFCNNKADCENLKCSHKCSPTPRGAMCFCPAGQNPNKTQCV--DADECLIDGSCD--QTCTNTH--LSYVC 438 (482)
Q Consensus 365 dC~dgsDE~~~C~~~~~C~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~C~--di~eC~~~~~Cs--~~C~n~~--gsy~C 438 (482)
.|.+|..... |.++ +|...+ |++..++|+|.|++||. .|+ ++++|. ..+|. ..|+++. ++|+|
T Consensus 5 ~C~~g~~g~~-c~~~-~c~~~p----C~n~~~~y~C~C~~G~~----~C~~~~~~~C~-~~pC~ngg~C~~~~~~~~~~C 73 (91)
T 1tpg_A 5 ICRDEKTQMI-YQQH-QSWLRP----VLRSNRVEYCWCNSGRA----QCHSVPVKSCS-EPRCFNGGTCQQALYFSDFVC 73 (91)
T ss_dssp CCBCSSSCCB-CCSS-CEEEEE----CSSSSCEEEEECSSSCC----BCCEECEEECS-SCCSCTTCEEEEESSSSCEEE
T ss_pred ECCCCCcCCe-ECCC-cccCCc----cccCCCCcEeECCCCCc----ccccCcCCccc-CCCCCCCCEeecCCCCCCeEe
Confidence 6777776655 7655 665433 56778899999999993 685 789997 46784 5899988 99999
Q ss_pred ecCCCeEECCCCCccc-cCCC
Q psy14262 439 SCTEGYTLRPDGKSCT-AVNV 458 (482)
Q Consensus 439 ~C~~Gy~l~~d~~tC~-dide 458 (482)
.|++||. ++.|+ +|+|
T Consensus 74 ~C~~G~~----G~~Ce~~ide 90 (91)
T 1tpg_A 74 QCPEGFA----GKSCEIDTRA 90 (91)
T ss_dssp ECCTTCB----SSSCCBCSSC
T ss_pred ECCCCCc----CCcCCcCCCC
Confidence 9999997 78886 6764
No 70
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=98.25 E-value=1e-06 Score=77.24 Aligned_cols=76 Identities=33% Similarity=0.826 Sum_probs=55.3
Q ss_pred CccCCCCcC--CCCCCC--CCccccCCCCccCCCCCccc-------------cccccCCCCCC--ceee-------ecCC
Q psy14262 381 DCENLKCSH--KCSPTP--RGAMCFCPAGQNPNKTQCVD-------------ADECLIDGSCD--QTCT-------NTHL 434 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~--~~~~C~C~~G~~~~~~~C~d-------------i~eC~~~~~Cs--~~C~-------n~~g 434 (482)
+|...+|.+ +|++.. ++|+|.|++|| .+..|+. +++|. ..+|. ..|+ ++.+
T Consensus 2 ~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~--~G~~C~~~~~~~~~~~~c~~~~~C~-~~~C~~~g~C~~~~~~~~~~~~ 78 (143)
T 4d90_A 2 ICDPNPCENGGICLPGLADGSFSCECPDGF--TDPNCSSVVEVASDEEEPTSAGPCT-PNPCHNGGTCEISEAYRGDTFI 78 (143)
T ss_dssp -CCSCCCGGGCEEEC-----CCEEECCTTC--CTTTTCSCCCCTTTTTSCCCCCTTS-SCCCCTTCEEEECCCEETTEEC
T ss_pred cCCCCcCCCCCEeeCCCCCCCEEeECCCCC--CCCCCccCccccccccccccCCcCC-CCCCCCCCEecCCCccccCCCC
Confidence 555566754 788765 58999999999 4555653 45564 45573 5888 7788
Q ss_pred ceEEecCCCeEECCCCCccc-cCCCCCCCC
Q psy14262 435 SYVCSCTEGYTLRPDGKSCT-AVNVPQDEP 463 (482)
Q Consensus 435 sy~C~C~~Gy~l~~d~~tC~-didec~~~p 463 (482)
+|+|.|++||. +..|. +|++|...|
T Consensus 79 ~~~C~C~~G~~----G~~C~~~i~~C~~~~ 104 (143)
T 4d90_A 79 GYVCKCPRGFN----GIHCQHNINECEVEP 104 (143)
T ss_dssp CEEEECCTTEE----STTSCEECCTTTTCC
T ss_pred CeEeECcCCCc----CCCcccCCCcCCCCC
Confidence 99999999996 78897 999998665
No 71
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=98.23 E-value=1.1e-06 Score=63.68 Aligned_cols=42 Identities=45% Similarity=0.910 Sum_probs=36.6
Q ss_pred cccccccC---------CCCCCceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 414 VDADECLI---------DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 414 ~di~eC~~---------~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
.+|+||.. .++|.+.|+|++|+|+|.|++||+|..++++|.+
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~~ 52 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQA 52 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEECSTTCEECTTSSCEEC
T ss_pred CccccccCcccccccccCCCCCCEeECCCCCeEEECCCCCeECCCCCccCC
Confidence 36788873 3689999999999999999999999999999864
No 72
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.23 E-value=4.7e-07 Score=84.50 Aligned_cols=40 Identities=35% Similarity=0.660 Sum_probs=35.3
Q ss_pred CcccCCCCeeeCC-CCCeecCccccCCCCCCCCCCCCCCCCcc--ccc
Q psy14262 2 IHQCFNGQVQCAL-SKKCIPHNWLCDEEMDCSTDDIVDNTDED--WDK 46 (482)
Q Consensus 2 ~~~C~~~~f~C~~-~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~--~~~ 46 (482)
...|.+++|+|.+ +|+|||..|+|||+.||+ |+|||. .|.
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~-----DgSDE~~~~C~ 93 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCR-----DGSDEDPETCS 93 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSS-----SSTTTSHHHHC
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCC-----CCCccccCcCC
Confidence 3579999999973 699999999999999998 999997 564
No 73
>2gtl_N Extracellular hemoglobin linker L2 subunit; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.20 E-value=8.9e-07 Score=82.02 Aligned_cols=55 Identities=25% Similarity=0.565 Sum_probs=44.2
Q ss_pred CCCCCceecC--CCCeeccCCCCCCCcCCCCCCCCCC--Ccccc-cccCCcc--ccCCCCceec
Q psy14262 204 ECTPGQFSCG--MGKCIPESWKCDGFVDCLEDGSDEP--NTCIH-QCFNGQV--QCALSKKCIP 260 (482)
Q Consensus 204 ~C~~~~f~C~--~g~Ci~~~~~CDg~~dC~~dgsDE~--~C~~~-~C~~~~f--~C~~~g~Ci~ 260 (482)
.|.+.+|+|. +|.|||..|+|||..|| .|||||. +|... .|.+.+| +|. ++.|+.
T Consensus 52 ~C~~~eFqC~~~~g~CIp~~wvCDG~~DC-~DGSDE~~~~C~~~~tc~~~qF~g~~~-~d~C~k 113 (220)
T 2gtl_N 52 HCEKRTFQCGGNEQECISDLLVCDGHKDC-HNAHDEDPDVCDTSVVKAGNVFSGTST-WHGCLA 113 (220)
T ss_dssp SSCTTEEECCSSSCCEEETTTTTSSSCCS-TTCTTSCGGGGCGGGGCTTCEEEEEEE-ECSSCC
T ss_pred CCCCCccCcCCCCCcEeCcceecCCCCCC-CCCCccCcccCCCCCccCCcceeeEec-CChhhc
Confidence 5788999995 68999999999999999 9999996 79776 7766554 455 555543
No 74
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.19 E-value=1.1e-07 Score=85.63 Aligned_cols=82 Identities=27% Similarity=0.571 Sum_probs=57.0
Q ss_pred Ccc-CCCCc-CCCCCCCCCccccCCCCc--cCCCCCcccccc--cc-CCCCC----CceeeecCC----ceEEecCC---
Q psy14262 381 DCE-NLKCS-HKCSPTPRGAMCFCPAGQ--NPNKTQCVDADE--CL-IDGSC----DQTCTNTHL----SYVCSCTE--- 442 (482)
Q Consensus 381 ~C~-~~~C~-~~C~~~~~~~~C~C~~G~--~~~~~~C~di~e--C~-~~~~C----s~~C~n~~g----sy~C~C~~--- 442 (482)
||. ..+|. .+|++++++|+|.|++|| .+++++|+++++ |. ...+| .+.|+++.+ +|+|.|++
T Consensus 5 eC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~ 84 (162)
T 1uzk_A 5 ECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84 (162)
T ss_dssp GGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred cCCCCCCCCCCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence 676 46774 489999999999999999 456899999887 86 22333 457887766 56666655
Q ss_pred ------------------------CeEECCCCCccccCCCCCCC
Q psy14262 443 ------------------------GYTLRPDGKSCTAVNVPQDE 462 (482)
Q Consensus 443 ------------------------Gy~l~~d~~tC~didec~~~ 462 (482)
||++..+++.|.+||||+..
T Consensus 85 ~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~ 128 (162)
T 1uzk_A 85 WGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQEL 128 (162)
T ss_dssp ETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHC
T ss_pred cCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCC
Confidence 55555556778999998754
No 75
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.17 E-value=1.1e-06 Score=77.19 Aligned_cols=69 Identities=30% Similarity=0.636 Sum_probs=54.7
Q ss_pred CCCCCCCCccccCCCCcc-------CCCCCccccccccCC--CCCC--ceeeecCCceEEecCCCeEECCC--------C
Q psy14262 390 KCSPTPRGAMCFCPAGQN-------PNKTQCVDADECLID--GSCD--QTCTNTHLSYVCSCTEGYTLRPD--------G 450 (482)
Q Consensus 390 ~C~~~~~~~~C~C~~G~~-------~~~~~C~di~eC~~~--~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d--------~ 450 (482)
+|++ .|+|.|++||. .++..|+++++|... .+|. +.|++++++|+|.|++||++... +
T Consensus 14 ~C~~---~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~ 90 (143)
T 2bou_A 14 SCVN---ATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESE 90 (143)
T ss_dssp EESS---SSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGG
T ss_pred EEcC---CCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCC
Confidence 5655 38999999992 235789999999833 3785 69999999999999999998753 4
Q ss_pred CccccCCCCCC
Q psy14262 451 KSCTAVNVPQD 461 (482)
Q Consensus 451 ~tC~didec~~ 461 (482)
..|++|+||..
T Consensus 91 ~~C~dideC~~ 101 (143)
T 2bou_A 91 NTCQDVDECSS 101 (143)
T ss_dssp CCEEECCHHHH
T ss_pred CCcCCccCccC
Confidence 58999998864
No 76
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=98.13 E-value=2e-06 Score=63.97 Aligned_cols=38 Identities=45% Similarity=0.872 Sum_probs=34.5
Q ss_pred CCCCCCceeeecC-CceEEecCCCeEECCCCCccccCCC
Q psy14262 421 IDGSCDQTCTNTH-LSYVCSCTEGYTLRPDGKSCTAVNV 458 (482)
Q Consensus 421 ~~~~Cs~~C~n~~-gsy~C~C~~Gy~l~~d~~tC~dide 458 (482)
.++.|+|+|+|++ |+|+|.|++||+|..|+++|.++++
T Consensus 5 ~nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~ 43 (59)
T 2wph_E 5 KNGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAVP 43 (59)
T ss_dssp GGGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESSS
T ss_pred CCCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCCC
Confidence 3578999999999 6999999999999999999999874
No 77
>2gtl_M Hemoglobin linker chain L1; annelid erythrocruorins, respiratory protein, hexagonal bilayer, dihedral D6 symmetry; HET: HEM; 3.50A {Lumbricus terrestris} SCOP: b.61.7.1 g.12.1.1 h.1.32.1
Probab=98.07 E-value=1.6e-06 Score=80.84 Aligned_cols=37 Identities=35% Similarity=0.817 Sum_probs=22.1
Q ss_pred CccCCCCCeecCC-CCceecCCcccCCCCCCCCCCCCC
Q psy14262 162 AVLCHPNELRCGS-SNQCVALSKFCDGKPDCSNGEDEG 198 (482)
Q Consensus 162 ~~~C~~~~f~C~~-~~~Ci~~~~~CDg~~dC~dgsDE~ 198 (482)
...|.+.+|+|.+ .++||+.+|+|||..||+|||||.
T Consensus 51 ~~~C~~~~F~C~~~~g~CI~~~~~CDG~~DC~DgSDE~ 88 (217)
T 2gtl_M 51 EHHCDEHESECRGDVPECIHDLLFCDGEKDCRDGSDED 88 (217)
T ss_dssp CCCCCTTEEECSSSSCCEEEGGGTTSSSCCSSSSTTTS
T ss_pred CCCCCCCceecCCCCCcEechhhccCCCCCCCCCCccc
Confidence 4456666666655 235666666666666666666665
No 78
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.01 E-value=6.5e-06 Score=82.42 Aligned_cols=152 Identities=23% Similarity=0.576 Sum_probs=60.2
Q ss_pred ccCCCCceecCCCccCccCCCCCCCCCCCCCCCCCCCccccCcccccCCCCccCCCCCCCCCCCCCCCCCcCCCCCCCcC
Q psy14262 251 QCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWD 330 (482)
Q Consensus 251 ~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE~~C~~~~C~~~~f~C~~g~~Ci~~~~~CDg~~DC~~g~~~dgsDE~~~ 330 (482)
.|.++|.|+. .+.| .|. .|.....|....|.+ .|.++++|+. .+.| .|..|+ ....
T Consensus 154 ~C~~~G~C~~-~~~C----~C~-----~G~~G~~C~~~~C~~---~C~~~G~C~~-~~~C----~C~~G~-----~G~~- 209 (324)
T 2ygq_A 154 GCRNGGFCNE-RRIC----ECP-----DGFHGPHCEKALCTP---RCMNGGLCVT-PGFC----ICPPGF-----YGVN- 209 (324)
T ss_dssp CCCSSCEECT-TSCE----ECC-----TTEESSSSCEESSSS---CCCTTCEECS-SCCE----ECCTTC-----BTTT-
T ss_pred CCCCCCEECC-CCeE----ECC-----CCCcCCCCCCCCCCC---CCCCCCEEcC-CCEE----eCCCCc-----cCCC-
Confidence 5666778875 3444 477 666666776556654 5888789986 4677 898444 3334
Q ss_pred CcCccCcccccCCCcccCCCCcccccccccCCCCCCCCCCCCCCCCCCCCCccCCCCcC--CCCCCCCCccccCCCCccC
Q psy14262 331 KYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH--KCSPTPRGAMCFCPAGQNP 408 (482)
Q Consensus 331 ~~C~~~~~~C~~~~f~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~~~C~~~~C~~--~C~~~~~~~~C~C~~G~~~ 408 (482)
|.. ..|. ..|.+++.|+.. ++| .|..|+.+.. |... +|. .+|.+ +|.. .++|.|++||
T Consensus 210 --C~~--~~C~---~~C~~~G~C~~~-~~C----~C~~G~~G~~-C~~~-~C~-~~C~~~g~C~~---~~~C~C~~G~-- 269 (324)
T 2ygq_A 210 --CDK--ANCS---TTCFNGGTCFYP-GKC----ICPPGLEGEQ-CEIS-KCP-QPCRNGGKCIG---KSKCKCSKGY-- 269 (324)
T ss_dssp --TCB--CCCS---SCCCSSCCBSCS-SCB----CCCTTCCTTT-TC---------------------------------
T ss_pred --ccc--CcCC---CCCCCCCeeCCC-Cee----eCCCCccCCC-CCcC-cCC-CcCCCCCEECC---CCEEECCCCC--
Confidence 543 2353 368887789863 567 8999988777 8765 664 34543 5653 5799999999
Q ss_pred CCCCccccccccCCCCCC--ceeeecCCceEEecCCCeEECCCCCccccC
Q psy14262 409 NKTQCVDADECLIDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 409 ~~~~C~di~eC~~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
.+..|+ +++|. ..|. ..|++ .++|.|.+||. |..|...
T Consensus 270 ~G~~C~-~~~C~--~~C~~~g~C~~---~~~C~C~~G~~----G~~C~~~ 309 (324)
T 2ygq_A 270 QGDLCS-KPVCE--PGCGAHGTCHE---PNKCQCQEGWH----GRHCNKR 309 (324)
T ss_dssp --------------------------------------------------
T ss_pred cCCCCc-CCCCC--CCCCCCCEECC---CCEeECCCCCc----CCCCCCC
Confidence 556675 45564 4562 46765 57999999997 6778543
No 79
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.90 E-value=5.8e-06 Score=65.59 Aligned_cols=50 Identities=38% Similarity=0.769 Sum_probs=42.3
Q ss_pred CccccccccCCCCCC-ceeeecCCceEEecCCCeEECCCCCccccCCCCC-CCC
Q psy14262 412 QCVDADECLIDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ-DEP 463 (482)
Q Consensus 412 ~C~di~eC~~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~-~~p 463 (482)
+|.+|+||....+|. +.|+|++++|+|.|++||++ +++.|.+|+||. ..|
T Consensus 1 sC~dideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~--~g~~C~dideC~~~~~ 52 (82)
T 1emn_A 1 SAVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL--AGNECVDTDECSVGNP 52 (82)
T ss_dssp CCCCCCSSSSTTSCSSSEECCCSSCCCEECCTTEEE--ETTEEEECCGGGTCCT
T ss_pred CCCccccCCCCCCcCCCEEEecCCCEEEECCCCeEC--CCCccCCcccccCCCC
Confidence 478899998557785 49999999999999999998 488999999997 444
No 80
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.83 E-value=1.5e-05 Score=86.88 Aligned_cols=61 Identities=28% Similarity=0.704 Sum_probs=54.0
Q ss_pred cccccc-CCCCCCceeeecC-CceEEecCCCeEECCCCCccccCCCCCCCCcEEEeccCCceEEEeccC
Q psy14262 415 DADECL-IDGSCDQTCTNTH-LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 415 di~eC~-~~~~Cs~~C~n~~-gsy~C~C~~Gy~l~~d~~tC~didec~~~p~~l~~~~~~~ir~~~l~~ 481 (482)
.+++|. .++.|+|.|.+++ ++|+|.|+.||.|.+++++|.+.. + +|+|+++.+||++.|..
T Consensus 264 ~~n~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l~~d~~~C~~~~-----~-~Ll~s~~~~i~~i~l~~ 326 (628)
T 4a0p_A 264 GWNECASSNGHCSHLCLAVPVGGFVCGCPAHYSLNADNRTCSAPT-----T-FLLFSQKSAINRMVIDE 326 (628)
T ss_dssp CCCTTTTTGGGCSSEEEEETTTEEEEECSTTCEECTTSSCEECCS-----S-EEEEEETTEEEEECCCT
T ss_pred cceEeccCCCCcchhhhcCCCCCeeEEcCCCcEecccCCcCcccc-----c-eeeeeccceEEEEeccc
Confidence 467887 5689999999999 999999999999999999998753 4 99999999999998864
No 81
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=97.79 E-value=8.7e-06 Score=73.69 Aligned_cols=87 Identities=32% Similarity=0.731 Sum_probs=63.7
Q ss_pred CCCCcccccccccCCCCCCCCCCCCCCCCCCCCCccCCC-CcC-CCCCCCCCccccCCCCccCCCCCcc-ccccccCCCC
Q psy14262 348 GSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLK-CSH-KCSPTPRGAMCFCPAGQNPNKTQCV-DADECLIDGS 424 (482)
Q Consensus 348 ~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~~~C~~~~-C~~-~C~~~~~~~~C~C~~G~~~~~~~C~-di~eC~~~~~ 424 (482)
.++ .|+. .++| .|..|+.+.. |. +|...+ |.+ +|+ +.|+|.|++|| .+..|+ ++++|....+
T Consensus 75 ~~g-~C~~-~~~C----~C~~G~~G~~-C~---~C~~~~~C~~g~C~---~~~~C~C~~G~--~G~~C~~~~~~C~~~~~ 139 (169)
T 2vj2_A 75 KHG-SCKL-PGDC----RCQYGWQGLY-CD---KCIPHPGCVHGICN---EPWQCLCETNW--GGQLCDKDLNYCGTHQP 139 (169)
T ss_dssp TTE-ECSS-TTCC----EECTTEESSS-SC---EECCCTTCSSEECS---STTCCEECTTE--ETTTTCEESCHHHHTCC
T ss_pred CCc-ccCC-CCee----ECCCCCCCCC-cc---cCCCCCCCCCCCcC---CCCEEeCCCCC--CCCcccCCCCCCCCCCC
Confidence 344 6765 5667 7888887666 74 454333 554 565 57999999999 567797 7899974467
Q ss_pred CC--ceeeec-CCceEEecCCCeEECCCCCcc
Q psy14262 425 CD--QTCTNT-HLSYVCSCTEGYTLRPDGKSC 453 (482)
Q Consensus 425 Cs--~~C~n~-~gsy~C~C~~Gy~l~~d~~tC 453 (482)
|. ..|+++ +++|+|.|++||+ +..|
T Consensus 140 C~~~g~C~~~~~~~~~C~C~~G~~----G~~C 167 (169)
T 2vj2_A 140 CLNGGTCSNTGPDKYQCSCPEGYS----GPNC 167 (169)
T ss_dssp CCTTCEEEECSTTCEEEECCTTCC----STTS
T ss_pred CCCCCEEcCCCCCCcEeECCCCCc----CcCc
Confidence 84 589997 8999999999997 5555
No 82
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.76 E-value=9.4e-06 Score=64.91 Aligned_cols=49 Identities=35% Similarity=0.673 Sum_probs=40.8
Q ss_pred cccccc-CCCCCC-ceeeecCCceEEecCCCeEECC-CCCccccCCCCCCCC
Q psy14262 415 DADECL-IDGSCD-QTCTNTHLSYVCSCTEGYTLRP-DGKSCTAVNVPQDEP 463 (482)
Q Consensus 415 di~eC~-~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~-d~~tC~didec~~~p 463 (482)
+|+||. .+..|. +.|+|++++|+|.|++||++.. +++.|++||||...|
T Consensus 2 dideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~ 53 (86)
T 1lmj_A 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDP 53 (86)
T ss_dssp CCCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCS
T ss_pred ccccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCC
Confidence 688997 446685 4899999999999999999863 578999999997655
No 83
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.76 E-value=1.4e-05 Score=66.82 Aligned_cols=55 Identities=25% Similarity=0.655 Sum_probs=40.5
Q ss_pred CCCccCCCCCcccccccc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 403 PAGQNPNKTQCVDADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 403 ~~G~~~~~~~C~di~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
..+| .+..| +++||. .++.|++.|++++++|+|.|++||++. ++++|++|+||..
T Consensus 19 ~~~~--~~~~C-d~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~-~g~~C~dideC~~ 74 (107)
T 2w2n_E 19 ENLY--FQGAM-GTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLV-AQRRCEDIDECQD 74 (107)
T ss_dssp -CCC--CSCCB-SCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEE-TTTEEEC------
T ss_pred CCCc--CCCCC-cCccCcCCCCCCCCEeEeCCCCeEEECCCCcccc-CCCccccccccCC
Confidence 3455 45567 789998 457899999999999999999999985 5789999999974
No 84
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.63 E-value=3.1e-05 Score=82.58 Aligned_cols=46 Identities=30% Similarity=0.540 Sum_probs=38.7
Q ss_pred CceecC-CCCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceec
Q psy14262 208 GQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIP 260 (482)
Q Consensus 208 ~~f~C~-~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~ 260 (482)
.+|+|. +|+||+..|+|||..|| .|+|||.+|.. ..+.|. .+.++|
T Consensus 69 ~~f~C~~~g~Ci~~~~~Cdg~~dC-~d~sdE~~c~~-----~~~~C~-~~~~~~ 115 (537)
T 3ojy_B 69 EGFVCAQTGRCVNRRLLCNGDNDC-GDQSDEANCRR-----IYKKCQ-HEMDQY 115 (537)
T ss_dssp SSEECTTTCCEECGGGTTSSSCCS-SSSCTTSSCSS-----CSSCCS-SCCBCC
T ss_pred CccCcCCCCcEeeccccCCCCCCC-CCccccccCCC-----CCCccc-cCcCCC
Confidence 689999 99999999999999999 99999998852 345676 556666
No 85
>3ojy_B Complement component C8 beta chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.62 E-value=3.7e-05 Score=82.03 Aligned_cols=46 Identities=24% Similarity=0.535 Sum_probs=39.9
Q ss_pred CCeecC-CCCceecCCcccCCCCCCCCCCCCCCCCCCCCCCCceecCCCCeec
Q psy14262 168 NELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIP 219 (482)
Q Consensus 168 ~~f~C~-~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~C~~~~f~C~~g~Ci~ 219 (482)
.+|+|. +| +||+..|+|||..||.|||||.+ |. ..++.|..+.+||
T Consensus 69 ~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sdE~~-c~----~~~~~C~~~~~~~ 115 (537)
T 3ojy_B 69 EGFVCAQTG-RCVNRRLLCNGDNDCGDQSDEAN-CR----RIYKKCQHEMDQY 115 (537)
T ss_dssp SSEECTTTC-CEECGGGTTSSSCCSSSSCTTSS-CS----SCSSCCSSCCBCC
T ss_pred CccCcCCCC-cEeeccccCCCCCCCCCcccccc-CC----CCCCccccCcCCC
Confidence 799998 77 99999999999999999999997 64 4456787777877
No 86
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.61 E-value=2.9e-05 Score=62.15 Aligned_cols=71 Identities=23% Similarity=0.687 Sum_probs=50.1
Q ss_pred ccCCCcccCCCCccccc--ccccCCCCCCCCCCC----CCCCCCCCCCccCCCCcCCCCCCCCCccccCC--CCc--cCC
Q psy14262 340 CHPNELRCGSSNQCVAL--SKFCDGKPDCSNGED----EGPFCNNKADCENLKCSHKCSPTPRGAMCFCP--AGQ--NPN 409 (482)
Q Consensus 340 C~~~~f~C~~g~~Ci~~--~~~CDg~~dC~dgsD----E~~~C~~~~~C~~~~C~~~C~~~~~~~~C~C~--~G~--~~~ 409 (482)
|......| +++.|++. +|+| .|+.|+. ... |...++|..++|.++|++++++|+|.|+ +|| ..+
T Consensus 6 C~~~~~~C-~~~~C~n~~g~y~C----~C~~G~~~~~~g~~-C~dideC~~~~C~~~C~n~~g~y~C~C~g~~G~~~~~~ 79 (87)
T 1z6c_A 6 CSLKPSIC-GTAVCKNIPGDFEC----ECPEGYRYNLKSKS-CEDIDECSENMCAQLCVNYPGGYTCYCDGKKGFKLAQD 79 (87)
T ss_dssp SSSSSSSB-TTSSCCCBTTBCCC----SSSTTCEEETTTTE-EECCCHHHHSCCSSEECCCSSSCCEECCSSSCCBCCTT
T ss_pred ccCCCCCC-CCCEeECCCCCEEE----ECCCCceECCCCCc-CCCcCeeCCCCCCCEEEccCCCEEEECCCCcCCcccCC
Confidence 33333346 44477765 7889 8999875 444 8644489877899999999999999994 676 345
Q ss_pred CCCcccc
Q psy14262 410 KTQCVDA 416 (482)
Q Consensus 410 ~~~C~di 416 (482)
++.|.+|
T Consensus 80 ~~~C~di 86 (87)
T 1z6c_A 80 QKSCEVV 86 (87)
T ss_dssp SSSCBCC
T ss_pred CCcceEC
Confidence 5666655
No 87
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=97.56 E-value=1.4e-05 Score=58.45 Aligned_cols=40 Identities=23% Similarity=0.568 Sum_probs=35.2
Q ss_pred Ccc--CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccccccc
Q psy14262 381 DCE--NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420 (482)
Q Consensus 381 ~C~--~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~eC~ 420 (482)
||. +++|++.|+|++++|+|.|++|| ..++++|.+++||.
T Consensus 3 EC~~~~~~C~~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 3 LCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CTTTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred cccCCCCCcCcEeEcCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 565 46788999999999999999999 57889999999985
No 88
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.54 E-value=3.8e-05 Score=82.15 Aligned_cols=35 Identities=40% Similarity=0.910 Sum_probs=32.6
Q ss_pred CCCCceecC-CCCeeccCCCCCCCcCCCCCCCCCCCcc
Q psy14262 205 CTPGQFSCG-MGKCIPESWKCDGFVDCLEDGSDEPNTC 241 (482)
Q Consensus 205 C~~~~f~C~-~g~Ci~~~~~CDg~~dC~~dgsDE~~C~ 241 (482)
|. ++|+|. +|+||+..|+|||..|| .|+|||.+|.
T Consensus 66 c~-~~f~C~~~g~Ci~~~~~Cdg~~dC-~d~sDE~~C~ 101 (554)
T 3ojy_A 66 CG-QDFQCKETGRCLKRHLVCNGDQDC-LDGSDEDDCE 101 (554)
T ss_dssp CS-SSEECSSSCCEECGGGTTSSSCCS-SSCTTSSSCC
T ss_pred CC-CcCccCCCCEEcccccccCCcccC-CCccccccCC
Confidence 53 699999 99999999999999999 9999999986
No 89
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.52 E-value=5e-05 Score=67.04 Aligned_cols=70 Identities=26% Similarity=0.558 Sum_probs=57.4
Q ss_pred cccCCCCccccc--ccccCCCCCCCCCCCCCCCCCCCCCcc--CCCCcCCC-CCCCCCccccCCCCc--cCCCCCccccc
Q psy14262 345 LRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNNKADCE--NLKCSHKC-SPTPRGAMCFCPAGQ--NPNKTQCVDAD 417 (482)
Q Consensus 345 f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~~~~C~--~~~C~~~C-~~~~~~~~C~C~~G~--~~~~~~C~di~ 417 (482)
.+|.+++.|++. +|+| .|+.|+.+.. |...++|. +.+|.++| +++.++|+|.|++|| ..++++|.+++
T Consensus 54 ~pC~n~g~C~~~~~~y~C----~C~~G~~G~~-C~~~deC~~~~~~C~~~C~~n~~g~y~C~C~~Gy~l~~dG~~C~~~~ 128 (146)
T 1x7a_L 54 NPCLNGGLCKDDINSYEC----WCQVGFEGKN-CELDATCNIKNGRCKQFCKTGADSKVLCSCTTGYRLAPDQKSCKPAV 128 (146)
T ss_dssp CSSCTTCEEEECSSCEEE----ECCSSEESTT-TCEECCTTSGGGSCSSBCCCCSSSCCCCBCCTTEEECTTSSSEEECS
T ss_pred CCCCCCCEeECCCCCEEE----ecCCCCcCCc-CCCCccccCCCCCCcCCCCCCCCCCEEeEcCCCcEeCCCCCcCCCCC
Confidence 368887799876 7889 8999988776 88545888 35788899 999999999999999 46788998876
Q ss_pred cc
Q psy14262 418 EC 419 (482)
Q Consensus 418 eC 419 (482)
+.
T Consensus 129 ~~ 130 (146)
T 1x7a_L 129 PF 130 (146)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 90
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=97.45 E-value=3.4e-05 Score=57.22 Aligned_cols=46 Identities=22% Similarity=0.521 Sum_probs=39.0
Q ss_pred CCCCcCCCCCCC-CCccccCCCCc--cCCCCCccccccccCCCCCCceeeecC
Q psy14262 384 NLKCSHKCSPTP-RGAMCFCPAGQ--NPNKTQCVDADECLIDGSCDQTCTNTH 433 (482)
Q Consensus 384 ~~~C~~~C~~~~-~~~~C~C~~G~--~~~~~~C~di~eC~~~~~Cs~~C~n~~ 433 (482)
+++|+|.|++++ ++|+|.|++|| .+++++|.+++ ..+|.+.|+|..
T Consensus 6 nggC~~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~----~~pC~~~c~n~~ 54 (59)
T 2wph_E 6 NGRCEQFCKNSADNKVVCSCTEGYRLAENQKSCEPAV----PFPCGRVSVSQT 54 (59)
T ss_dssp GGGCSSEEEECSTTCEEEECCTTEEECTTSSCEEESS----SSCTTCCCSCCC
T ss_pred CCCcCCEeEeCCCCCEEeeCCCCcEECCCCCcccCCC----CCCCCCcccccc
Confidence 567899999999 59999999999 67899999875 367889998854
No 91
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=97.45 E-value=4.7e-05 Score=54.66 Aligned_cols=37 Identities=22% Similarity=0.526 Sum_probs=33.2
Q ss_pred CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccccccc
Q psy14262 384 NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420 (482)
Q Consensus 384 ~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~eC~ 420 (482)
+++|++.|+|++++|+|.|++|| ..++++|.+++|+.
T Consensus 5 ng~C~~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 5 NGGCDQFCREERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp TTSSSSCCCEETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred CCCcCCEeEcCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 46788999999999999999999 57899999999874
No 92
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=97.39 E-value=7.9e-05 Score=79.68 Aligned_cols=54 Identities=28% Similarity=0.712 Sum_probs=39.9
Q ss_pred cCCCCCeecC-CCCceecCCcccCCCCCCCCCCCCCCCCCCCCCCCceecCCCCeeccC
Q psy14262 164 LCHPNELRCG-SSNQCVALSKFCDGKPDCSNGEDEGPFCNAECTPGQFSCGMGKCIPES 221 (482)
Q Consensus 164 ~C~~~~f~C~-~~~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~C~~~~f~C~~g~Ci~~~ 221 (482)
.|. .+|+|. +| +||+..|+|||..||.|||||.+ |. ......+.|.....||..
T Consensus 65 ~c~-~~f~C~~~g-~Ci~~~~~Cdg~~dC~d~sDE~~-C~-~~~~~~~~C~~~~~iPg~ 119 (554)
T 3ojy_A 65 QCG-QDFQCKETG-RCLKRHLVCNGDQDCLDGSDEDD-CE-DVRAIDEDCSQYEPIPGS 119 (554)
T ss_dssp CCS-SSEECSSSC-CEECGGGTTSSSCCSSSCTTSSS-CC-SCCCCCTTTTTSCBCTTH
T ss_pred CCC-CcCccCCCC-EEcccccccCCcccCCCcccccc-CC-CCCCCccccccccccCcc
Confidence 354 799998 76 99999999999999999999998 85 222223456544555543
No 93
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.32 E-value=0.00021 Score=77.63 Aligned_cols=61 Identities=28% Similarity=0.655 Sum_probs=52.0
Q ss_pred ccccc-CCCCCCceeeecC--CceEEecCCCeEECCCCCccccCCCCCCCCcEEEeccCCceEEEeccC
Q psy14262 416 ADECL-IDGSCDQTCTNTH--LSYVCSCTEGYTLRPDGKSCTAVNVPQDEPASIIFSSTVDIRRIHLNG 481 (482)
Q Consensus 416 i~eC~-~~~~Cs~~C~n~~--gsy~C~C~~Gy~l~~d~~tC~didec~~~p~~l~~~~~~~ir~~~l~~ 481 (482)
.++|. .++.|+|.|..++ ++|+|.|+.||.|..++++|.+.. .| +|+|+.+.+||+|.|..
T Consensus 272 ~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~----~~-~Ll~~~~~~i~~i~l~~ 335 (619)
T 3s94_A 272 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGA----TE-LLLLARRTDLRRISLDT 335 (619)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSC----SE-EEEEEESSCEEEEESSS
T ss_pred cccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCC----ce-EEEEEcccceEEEecCC
Confidence 45676 4689999999987 479999999999999999998643 34 99999999999999865
No 94
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=97.28 E-value=4.8e-05 Score=58.24 Aligned_cols=40 Identities=25% Similarity=0.460 Sum_probs=35.7
Q ss_pred Ccc--CCCCcCCCCCCCC-CccccCCCCc--cCCCCCcccccccc
Q psy14262 381 DCE--NLKCSHKCSPTPR-GAMCFCPAGQ--NPNKTQCVDADECL 420 (482)
Q Consensus 381 ~C~--~~~C~~~C~~~~~-~~~C~C~~G~--~~~~~~C~di~eC~ 420 (482)
+|. +++|++.|+++++ +|+|.|++|| ..++++|.+++||.
T Consensus 7 eC~~~nggC~h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 7 ICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CTTSGGGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccCCCCCcCCEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 675 6789999999998 7999999999 67899999999985
No 95
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=97.19 E-value=0.00028 Score=63.47 Aligned_cols=46 Identities=35% Similarity=0.881 Sum_probs=38.8
Q ss_pred CccccccccC-CC---CCCceeeecCCceEEecCCCeEECCCCCccccCC
Q psy14262 412 QCVDADECLI-DG---SCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 412 ~C~di~eC~~-~~---~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
.+.+++||.. .+ .|++.|+|++|+|.|.|++||+|..++++|++++
T Consensus 120 ~~~di~eC~~~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~~ 169 (170)
T 1szb_A 120 AAEDIDECQVAPGEAPTCDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQS 169 (170)
T ss_dssp EEEECCTTCCCTTSCCSSSSEEEEETTEEEEECCTTEEECTTSSCEEEC-
T ss_pred eccccCcccCCCCCCCccCCccccCCCCEEEeCCCCcEECCCCCcccccc
Confidence 3567899983 33 3999999999999999999999999999998764
No 96
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=97.15 E-value=7.4e-05 Score=54.09 Aligned_cols=37 Identities=24% Similarity=0.445 Sum_probs=33.0
Q ss_pred CCCCcCCCCCCCC-CccccCCCCc--cCCCCCcccccccc
Q psy14262 384 NLKCSHKCSPTPR-GAMCFCPAGQ--NPNKTQCVDADECL 420 (482)
Q Consensus 384 ~~~C~~~C~~~~~-~~~C~C~~G~--~~~~~~C~di~eC~ 420 (482)
+++|+|.|+++++ +|+|.|++|| ..++++|.+++||.
T Consensus 6 nggC~~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 6 NGGCEQYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp GGGCSSEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred CCCcCCEeEcCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 4678999999998 7999999999 67899999999985
No 97
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=97.15 E-value=0.00053 Score=68.45 Aligned_cols=147 Identities=22% Similarity=0.517 Sum_probs=54.9
Q ss_pred CCeeccCCCCCCCcCCCCCCCCCCCcccccccCCccccCCCCceecCCCccCccCCCCCCCCCCCCCCCCCCCccccCcc
Q psy14262 215 GKCIPESWKCDGFVDCLEDGSDEPNTCIHQCFNGQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKFHQCFNGQ 294 (482)
Q Consensus 215 g~Ci~~~~~CDg~~dC~~dgsDE~~C~~~~C~~~~f~C~~~g~Ci~~~~~CDg~~dC~~~~~~dgsDE~~C~~~~C~~~~ 294 (482)
|.|+.. +.-.| ..|.....|....|.+ .|.++|.|+. ...| .|. .|.....|....|..
T Consensus 159 G~C~~~-----~~C~C-~~G~~G~~C~~~~C~~---~C~~~G~C~~-~~~C----~C~-----~G~~G~~C~~~~C~~-- 217 (324)
T 2ygq_A 159 GFCNER-----RICEC-PDGFHGPHCEKALCTP---RCMNGGLCVT-PGFC----ICP-----PGFYGVNCDKANCST-- 217 (324)
T ss_dssp CEECTT-----SCEEC-CTTEESSSSCEESSSS---CCCTTCEECS-SCCE----ECC-----TTCBTTTTCBCCCSS--
T ss_pred CEECCC-----CeEEC-CCCCcCCCCCCCCCCC---CCCCCCEEcC-CCEE----eCC-----CCccCCCcccCcCCC--
Confidence 466642 33467 7777777776556654 6877788976 3444 487 666666776666752
Q ss_pred cccCCCCccCCCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccCCCcccCCCCcccccccccCCCCCCCCCCCCCC
Q psy14262 295 VQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVALSKFCDGKPDCSNGEDEGP 374 (482)
Q Consensus 295 f~C~~g~~Ci~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~~~f~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~ 374 (482)
.|.++++|+. .+.| .|..|+ .... |.. ..|. ..|.+++.|+. .+.| .|..|+.+..
T Consensus 218 -~C~~~G~C~~-~~~C----~C~~G~-----~G~~---C~~--~~C~---~~C~~~g~C~~-~~~C----~C~~G~~G~~ 273 (324)
T 2ygq_A 218 -TCFNGGTCFY-PGKC----ICPPGL-----EGEQ---CEI--SKCP---QPCRNGGKCIG-KSKC----KCSKGYQGDL 273 (324)
T ss_dssp -CCCSSCCBSC-SSCB----CCCTTC-----CTTT---TC----------------------------------------
T ss_pred -CCCCCCeeCC-CCee----eCCCCc-----cCCC---CCc--CcCC---CcCCCCCEECC-CCEE----ECCCCCcCCC
Confidence 5888889986 4678 899444 4444 642 3453 36888778985 4677 8999987776
Q ss_pred CCCCCCCccCCCCcC--CCCCCCCCccccCCCCccCCCCCcc
Q psy14262 375 FCNNKADCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 375 ~C~~~~~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~ 414 (482)
|... +|. .+|.+ +|.+ .++|.|++|| .+..|+
T Consensus 274 -C~~~-~C~-~~C~~~g~C~~---~~~C~C~~G~--~G~~C~ 307 (324)
T 2ygq_A 274 -CSKP-VCE-PGCGAHGTCHE---PNKCQCQEGW--HGRHCN 307 (324)
T ss_dssp ------------------------------------------
T ss_pred -CcCC-CCC-CCCCCCCEECC---CCEeECCCCC--cCCCCC
Confidence 8765 665 34543 6764 4789999999 566674
No 98
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.12 E-value=7.1e-05 Score=76.34 Aligned_cols=46 Identities=33% Similarity=0.770 Sum_probs=0.0
Q ss_pred cccccc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCC
Q psy14262 415 DADECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460 (482)
Q Consensus 415 di~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~ 460 (482)
+++||. .++.|++.|.++.|+|+|.|++||+|..++++|.+|+||.
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~ 48 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQDVNECA 48 (386)
T ss_dssp -----------------------------------------------
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCccceeC
Confidence 578897 5678999999999999999999999999999999999996
No 99
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.11 E-value=0.00049 Score=68.11 Aligned_cols=71 Identities=30% Similarity=0.712 Sum_probs=59.0
Q ss_pred cccCCCCccccc--ccccCCCCCCCCCCCCCCCCC-CCCCccC---CCCcCCCCCCCCCccccCCCCc--cCCCCCcccc
Q psy14262 345 LRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCN-NKADCEN---LKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416 (482)
Q Consensus 345 f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~-~~~~C~~---~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di 416 (482)
.+|.+++.|++. +++| .|+.|..+.. |. ..++|.. .+|.+.|.++.++|+|.|++|| ..++..|.++
T Consensus 11 ~pC~~~g~C~~~~~~~~C----~C~~g~~g~~-C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~C~~g~~~~~~~~~C~~~ 85 (317)
T 3h5c_B 11 QPCLHNGSCQDSIWGYTC----TCSPGYEGSN-CELAKNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPH 85 (317)
T ss_dssp CCCTTTCCCCCCSSSCCC----CCSSSCCSSS-SCCCSSSCCTTCTTSCSSEEECCSSSCEEECCTTEECCTTSSCCEEC
T ss_pred CCCCCCCEeECCCCCeEE----ECCCCCcCCc-cccCcccCCCCCCCCCcCccccCCCeeEEeccccccccccccccccc
Confidence 358887788875 7889 9999998777 97 3349984 7899999999999999999999 5567889988
Q ss_pred cccc
Q psy14262 417 DECL 420 (482)
Q Consensus 417 ~eC~ 420 (482)
++|.
T Consensus 86 ~~c~ 89 (317)
T 3h5c_B 86 DQCA 89 (317)
T ss_dssp SSCC
T ss_pred cccc
Confidence 8874
No 100
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.09 E-value=0.00035 Score=71.61 Aligned_cols=44 Identities=32% Similarity=0.917 Sum_probs=38.6
Q ss_pred cccc-CCCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 417 DECL-IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 417 ~eC~-~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
+||. .+..|++.|+|++++|.|.|++||+| .++++|++||||..
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~-~~~~~C~dideC~~ 45 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQL-VAQRRCEDIDECQD 45 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEE-CSSSCEEECCCCST
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCc-CCCCcccCchhhhc
Confidence 4676 45678999999999999999999999 57899999999974
No 101
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.07 E-value=0.00015 Score=61.07 Aligned_cols=68 Identities=28% Similarity=0.586 Sum_probs=53.0
Q ss_pred ccCCCCccccc--ccccCCCCCCCCCCCCCCCCCCC---CCcc--CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccc
Q psy14262 346 RCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNNK---ADCE--NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416 (482)
Q Consensus 346 ~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~~---~~C~--~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di 416 (482)
.|.++++|++. +|+| .|+.|+.+.. |... ++|. +++|+++|+++.++|+|.|++|| ..++++|.++
T Consensus 21 ~C~~~g~C~~~~~~y~C----~C~~G~~G~~-C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~~~~g~~C~~~ 95 (114)
T 1aut_L 21 LCCGHGTCIDGIGSFSC----DCRSGWEGRF-CQREVSFLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKLGDDLLQCHPA 95 (114)
T ss_dssp TTTTSEEECCCSSCCCE----EECTTEESTT-SCEECCSSSSSSGGGGCSSEEEECSSSEEEECCTTEEECTTSSCEEEC
T ss_pred cCCCcCCCCCCCCCcEe----eCCCCCcCCC-cCcCCcCCcCcCCCCCCCCEeECCCCCEEeECCCCeeECCCCCccCcC
Confidence 46666688875 7889 8999987776 8732 2686 56788899999999999999999 4678888765
Q ss_pred cc
Q psy14262 417 DE 418 (482)
Q Consensus 417 ~e 418 (482)
.+
T Consensus 96 ~~ 97 (114)
T 1aut_L 96 VK 97 (114)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 102
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=97.04 E-value=0.00031 Score=68.53 Aligned_cols=46 Identities=33% Similarity=0.694 Sum_probs=39.7
Q ss_pred ccccc-C-CCCCCceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 416 ADECL-I-DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 416 i~eC~-~-~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
.|||. . ++.|+|+|.|+.++|+|.|++||+|..++++|.++++|.-
T Consensus 2 ~~eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~C 49 (283)
T 3f1s_B 2 KNECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCAC 49 (283)
T ss_dssp -CCCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTCT
T ss_pred CCccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCcccccccccc
Confidence 57887 4 6899999999999999999999999999999999887753
No 103
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=97.00 E-value=0.00056 Score=52.53 Aligned_cols=26 Identities=27% Similarity=0.583 Sum_probs=15.1
Q ss_pred Ccc--CCCCcC--CCCCCCCCcccc-CCCCc
Q psy14262 381 DCE--NLKCSH--KCSPTPRGAMCF-CPAGQ 406 (482)
Q Consensus 381 ~C~--~~~C~~--~C~~~~~~~~C~-C~~G~ 406 (482)
||. .++|.+ +|+|++++|+|. +..||
T Consensus 5 EC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~ 35 (71)
T 2kl7_A 5 ECLTIPEACKGEMKCINHYGGYLCLPRSAAV 35 (71)
T ss_dssp CTTCCCCSCTTEEEEEETTCCEEEEETTSCC
T ss_pred cccCCCCCCCCCCEeECCCCCeEecccCCcc
Confidence 665 345643 577777777775 33455
No 104
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=96.99 E-value=0.00025 Score=62.05 Aligned_cols=68 Identities=24% Similarity=0.473 Sum_probs=55.2
Q ss_pred cccCCCCccccc--ccccCCCCCCCCCCCCCCCCCC--CCCc---c--CCCCcCCCCCCCC-CccccCCCCc--cCCCCC
Q psy14262 345 LRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNN--KADC---E--NLKCSHKCSPTPR-GAMCFCPAGQ--NPNKTQ 412 (482)
Q Consensus 345 f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~--~~~C---~--~~~C~~~C~~~~~-~~~C~C~~G~--~~~~~~ 412 (482)
.+|.++++|++. +|.| .|+.|+.+.. |.. + +| . +++|.++|+++.+ +|+|.|++|| ..++++
T Consensus 53 ~pC~n~g~C~~~~g~y~C----~C~~G~~G~~-C~~~~~-~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~ 126 (142)
T 2c4f_L 53 SPCQNGGSCKDQLQSYIC----FCLPAFEGRN-CETHKD-DQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVS 126 (142)
T ss_dssp CCCCTTCEEEEETTEEEE----ECCTTEESTT-SCEEGG-GCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSC
T ss_pred CCcCCCCEEeCCCCCEEe----eCCCCccCCc-cccCcc-ccccccCCCCCccCEeECCCCCCEEEECCCCceECCCCCC
Confidence 368887799876 7889 8999988777 874 3 43 3 5678889999999 9999999999 467889
Q ss_pred cccccc
Q psy14262 413 CVDADE 418 (482)
Q Consensus 413 C~di~e 418 (482)
|.++++
T Consensus 127 C~~~~e 132 (142)
T 2c4f_L 127 CTPTVE 132 (142)
T ss_dssp EEESSS
T ss_pred CCCCCc
Confidence 988876
No 105
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=96.85 E-value=0.00017 Score=62.49 Aligned_cols=68 Identities=21% Similarity=0.546 Sum_probs=31.9
Q ss_pred ccCCCCccccc--ccccCCCCCCCCCCCCCCCCCC-C-CCccC--CCCcCCCCCCCCCccccCCCCc--cCCCCCccccc
Q psy14262 346 RCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNN-K-ADCEN--LKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDAD 417 (482)
Q Consensus 346 ~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~-~-~~C~~--~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~ 417 (482)
+|.+++.|++. +|.| .|+.|+.+.. |.. . ++|.. .+|.++|+++.++|+|.|++|| ..++++|.+++
T Consensus 49 pC~n~g~C~~~~~~y~C----~C~~G~~G~~-C~~~i~d~C~~~~~~C~~~C~~~~g~y~C~C~~Gy~l~~~g~~C~~~~ 123 (134)
T 2vh0_B 49 PCQNQGKCKDGLGEYTC----TCLEGFEGKN-CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPTG 123 (134)
T ss_dssp -------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEESS
T ss_pred CCCCcCCcccCCCCEEe----eCCCCccCCc-cccCCCCccccCCCCCCCEeECCCCCEEEECCCCcEECCCCCccCcCC
Confidence 58777788875 7889 8999988776 874 1 37873 5788899999999999999999 46688898765
Q ss_pred c
Q psy14262 418 E 418 (482)
Q Consensus 418 e 418 (482)
+
T Consensus 124 ~ 124 (134)
T 2vh0_B 124 P 124 (134)
T ss_dssp S
T ss_pred C
Confidence 3
No 106
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=96.85 E-value=0.00036 Score=56.30 Aligned_cols=53 Identities=11% Similarity=0.264 Sum_probs=40.8
Q ss_pred CccccCCCCccCCCCCccccccccCCCCCCceeeecCCceEEecCCCeEECCCCCccc--cCCCCCCCC
Q psy14262 397 GAMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT--AVNVPQDEP 463 (482)
Q Consensus 397 ~~~C~C~~G~~~~~~~C~di~eC~~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~--didec~~~p 463 (482)
+|+|.|++|| .+..| ++++|+ ...|+|..++|+|.|++||+ .|+ ++++|.+.|
T Consensus 1 sy~C~C~~g~--~g~~c-~~~~c~-----~~pC~n~~~~y~C~C~~G~~------~C~~~~~~~C~~~p 55 (91)
T 1tpg_A 1 SYQVICRDEK--TQMIY-QQHQSW-----LRPVLRSNRVEYCWCNSGRA------QCHSVPVKSCSEPR 55 (91)
T ss_dssp CCCCCCBCSS--SCCBC-CSSCEE-----EEECSSSSCEEEEECSSSCC------BCCEECEEECSSCC
T ss_pred CeeeECCCCC--cCCeE-CCCccc-----CCccccCCCCcEeECCCCCc------ccccCcCCcccCCC
Confidence 5899999999 45566 577775 23467889999999999995 574 678887665
No 107
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=96.80 E-value=0.0002 Score=66.18 Aligned_cols=68 Identities=22% Similarity=0.555 Sum_probs=32.0
Q ss_pred cccCCCCccccc--ccccCCCCCCCCCCCCCCCCCCC--CCcc--CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccc
Q psy14262 345 LRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNNK--ADCE--NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416 (482)
Q Consensus 345 f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~~--~~C~--~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di 416 (482)
.+|.+++.|++. +|.| .|+.|+.+.. |... ++|. +.+|.++|+++.++|+|.|++|| ..++++|.++
T Consensus 48 ~pC~ngg~C~n~~g~y~C----~C~~Gf~G~~-Ce~~i~deC~~~~~~C~~~C~n~~gsy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 48 SPCQNQGKCKDGLGEYTC----TCLEGFEGKN-CELFTRKLCSLDNGDCDQFCHEEQNSVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp --------------------------------------CCGGGTGGGGCSSEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CCCCCCCEeECCCCCeeE----eCCCCceecc-ccccccccccCCCCCCCCEeECCCCCeEEECCCCceeCCCCCccccC
Confidence 368887789875 8899 8999998777 9741 3898 36788899999999999999999 4668899876
Q ss_pred c
Q psy14262 417 D 417 (482)
Q Consensus 417 ~ 417 (482)
.
T Consensus 123 ~ 123 (195)
T 1nfu_B 123 G 123 (195)
T ss_dssp S
T ss_pred C
Confidence 4
No 108
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=96.60 E-value=0.0015 Score=57.76 Aligned_cols=43 Identities=37% Similarity=0.729 Sum_probs=37.6
Q ss_pred ccccccccC--CCCCCceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 413 CVDADECLI--DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 413 C~di~eC~~--~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
+.++++|.. ...|++.|.|++++|+|.|.+||.|..++++|++
T Consensus 114 ~~d~~eC~~~~~~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 114 ATDINECTDFVDVPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp EEECCTTTC-CCCCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred cccCcccCCCCCCCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 567889973 3579999999999999999999999999999975
No 109
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=96.31 E-value=5.5e-05 Score=73.04 Aligned_cols=130 Identities=10% Similarity=0.031 Sum_probs=73.0
Q ss_pred ccccCCCCccC--CCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccC----CCcccCCCCcccccccccCCCCCCC
Q psy14262 294 QVQCALSKKCI--PHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHP----NELRCGSSNQCVALSKFCDGKPDCS 367 (482)
Q Consensus 294 ~f~C~~g~~Ci--~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~----~~f~C~~g~~Ci~~~~~CDg~~dC~ 367 (482)
...|.++++|| ..+|.| +|+ .|..... |......|.. ..-+|.++.+|+
T Consensus 37 ~~~c~ngG~C~~g~~~y~C----~Cp-----~Gf~G~~---Ce~ni~ec~~~~~c~s~pC~nggtc~------------- 91 (267)
T 4fbr_A 37 DIKSDDGGKTLKGTMTYNG----EGP-----IGFRGTL---SSANNYTVENQWGGTSAPWQPGGVWV------------- 91 (267)
T ss_dssp EEECSSTTSEEEEEEEETT----SCC-----EEEEEEE---CSTTEEEEEEESSSTTSCEEEEEEEE-------------
T ss_pred CCCcCCCCeecCCCCCeEE----eCC-----CCccccc---ccccccccccccCcCCCcccCCCeee-------------
Confidence 34688888999 588999 899 4444444 4433333210 111333333332
Q ss_pred CCCCCCCCCCCCCCccCCCCcC--CCCCCCCCccccCCCCccCCCCCcc-cccccc------------------------
Q psy14262 368 NGEDEGPFCNNKADCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCV-DADECL------------------------ 420 (482)
Q Consensus 368 dgsDE~~~C~~~~~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~-di~eC~------------------------ 420 (482)
. ... |..+.+|.+.+|.. +|++...+|+|.|++|| .+..|. ++++|.
T Consensus 92 ~---G~~-c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf--~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~ 165 (267)
T 4fbr_A 92 L---GAR-DKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGF--KSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQ 165 (267)
T ss_dssp C---CCC-SSCCEEEEEEECSSTTSEEEEEEEETTSCCEEE--EEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTS
T ss_pred c---cCc-cccccccCCCCCCCCCEEecCCccEEeeCCCCc--cccCCCCCcccccccCCcCCccccCCcceeccccccc
Confidence 1 111 44333566556654 67777778888888888 222232 122210
Q ss_pred ----CCCCC--CceeeecCCceEEecCCCeEECCCCCccc-cCCC
Q psy14262 421 ----IDGSC--DQTCTNTHLSYVCSCTEGYTLRPDGKSCT-AVNV 458 (482)
Q Consensus 421 ----~~~~C--s~~C~n~~gsy~C~C~~Gy~l~~d~~tC~-dide 458 (482)
...+| ...|++...+|+|.|++||+ ++.|. +|++
T Consensus 166 ~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~----G~~c~~~i~e 206 (267)
T 4fbr_A 166 NVINVDAKSNDGGKTLSGTMTYNGEGPIGFR----GTLTSPDTYT 206 (267)
T ss_dssp CEEEEEEECSSTTSEEEEEEEETTSCCEEEE----EEEEETTEEE
T ss_pred ccccCCCCCCCCCEeeCCCCCeEEeCCCCcc----ccccccccce
Confidence 01223 24688888999999999998 55665 4454
No 110
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=96.19 E-value=0.0017 Score=73.58 Aligned_cols=34 Identities=35% Similarity=0.685 Sum_probs=31.5
Q ss_pred CCeeeCCCCCeecCccccCCCCCCCCCCCCCCCCcccccc
Q psy14262 8 GQVQCALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKY 47 (482)
Q Consensus 8 ~~f~C~~~~~Ci~~~~~CDg~~dC~~~~~~d~sDE~~~~~ 47 (482)
++|+|. +|+||+..|+|||.+||+ |+|||.+|..
T Consensus 121 ~~F~C~-~g~ci~~~~~c~g~~dC~-----d~sde~~C~~ 154 (913)
T 3t5o_A 121 NKFRCD-SGRCIARKLECNGENDCG-----DNSDERDCGR 154 (913)
T ss_dssp SEEECT-TSCEEEGGGSSSSSCCSS-----SSGGGTTCSS
T ss_pred cccccC-CCceEccceecCCcccCC-----CccccccCCC
Confidence 679999 899999999999999998 8999998864
No 111
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.07 E-value=0.0016 Score=46.54 Aligned_cols=30 Identities=27% Similarity=0.733 Sum_probs=25.7
Q ss_pred CCCcCCCCCCCCCccccCCCCc--cCCCCCcc
Q psy14262 385 LKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCV 414 (482)
Q Consensus 385 ~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~ 414 (482)
.+|+++|+|++++|+|.|++|| ..++++|.
T Consensus 20 ~~C~~~C~n~~Gsy~C~C~~Gy~~~~d~~~C~ 51 (53)
T 1apq_A 20 PQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQ 51 (53)
T ss_dssp CTTSSEEEEETTEEEEECSTTCEECTTSSCEE
T ss_pred CCCCCEeECCCCCeEEECCCCCeECCCCCccC
Confidence 5788899999999999999999 45677775
No 112
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=96.04 E-value=0.0052 Score=53.68 Aligned_cols=42 Identities=33% Similarity=0.730 Sum_probs=34.9
Q ss_pred ccccccCCCCCC-ceeeecCCceEEecCCCeEECCCCCccccCC
Q psy14262 415 DADECLIDGSCD-QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 415 di~eC~~~~~Cs-~~C~n~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
+|+||+ ..+|. ++|+|++++|+|.|++||++...+++|.++.
T Consensus 3 dideC~-~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~ 45 (147)
T 2w86_A 3 DIDECE-SSPCINGVCKNSPGSFICECSSESTLDPTKTICIETI 45 (147)
T ss_dssp CCCGGG-GCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECC
T ss_pred cCccCc-CCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCC
Confidence 678887 46785 5899999999999999999988888887654
No 113
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=95.82 E-value=0.0076 Score=40.10 Aligned_cols=34 Identities=38% Similarity=0.940 Sum_probs=26.6
Q ss_pred ccccccCCCCCC--ceeeecCCceEEecCCCeEECCCCCcc
Q psy14262 415 DADECLIDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSC 453 (482)
Q Consensus 415 di~eC~~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC 453 (482)
++++|. ..+|. ..|+++.++|+|.|++||. ++.|
T Consensus 2 d~d~C~-~~pC~ngg~C~~~~~~~~C~C~~G~~----G~~C 37 (39)
T 1edm_B 2 DGDQCE-SNPCLNGGSCKDDINSYECWCPFGFE----GKNC 37 (39)
T ss_dssp CCCTTT-TCCCCTTCEEEEETTEEEEECCTTCC----STTS
T ss_pred ccccCC-CCCCCCCCEeEcCCCceEeECCCCCc----CCcc
Confidence 567776 45774 5899999999999999996 5555
No 114
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=95.67 E-value=0.0087 Score=65.44 Aligned_cols=83 Identities=24% Similarity=0.601 Sum_probs=56.6
Q ss_pred cccCCCCcccccccccCCCCCCC----CCCCCCCCCC--CCCCccC---CCCcC--CCCCCCCCccccCCCCccCCCCCc
Q psy14262 345 LRCGSSNQCVALSKFCDGKPDCS----NGEDEGPFCN--NKADCEN---LKCSH--KCSPTPRGAMCFCPAGQNPNKTQC 413 (482)
Q Consensus 345 f~C~~g~~Ci~~~~~CDg~~dC~----dgsDE~~~C~--~~~~C~~---~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C 413 (482)
..|.+++.|+. ..| .|. .|+.+.. |. .. +|.. .+|+. +|.+ +.|.|++|| .+..|
T Consensus 493 ~~Cs~~G~C~~--g~C----~C~~~~~~Gy~G~~-Ce~~~~-~C~~~~~~~C~~~G~C~~----g~C~C~~Gy--~G~~C 558 (690)
T 3fcs_B 493 PVCSQRGECLC--GQC----VCHSSDFGKITGKY-CECDDF-SCVRYKGEMCSGHGQCSC----GDCLCDSDW--TGYYC 558 (690)
T ss_dssp CGGGGSEEECS--SSE----EECCCSSCCCBSTT-SCBCSS-CCCBSSSSBGGGSEEEET----TEEEECTTE--ESSSS
T ss_pred CCCCCCCEEEC--Cee----EeecCCCCCeeCCC-cCcccC-cCcCCCCCCCCCCCEecC----CeeECcCCC--cCCCC
Confidence 45877678884 455 787 7777666 86 33 6762 45653 5654 789999999 55566
Q ss_pred c---ccccccC--CCCCC--ceeeecCCceEEec-CCCeE
Q psy14262 414 V---DADECLI--DGSCD--QTCTNTHLSYVCSC-TEGYT 445 (482)
Q Consensus 414 ~---di~eC~~--~~~Cs--~~C~n~~gsy~C~C-~~Gy~ 445 (482)
+ ++++|.. ...|+ ..|++ .+|.| .+||.
T Consensus 559 eC~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~ 594 (690)
T 3fcs_B 559 NCTTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSY 594 (690)
T ss_dssp CEECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCB
T ss_pred ccCCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCcc
Confidence 5 5677762 25674 47865 38999 89997
No 115
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=95.53 E-value=0.0034 Score=46.59 Aligned_cols=42 Identities=26% Similarity=0.661 Sum_probs=31.0
Q ss_pred CccccccccCCCCCC----ceeeecCCceEEecCCCeEECCCCCccccCC
Q psy14262 412 QCVDADECLIDGSCD----QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 412 ~C~di~eC~~~~~Cs----~~C~n~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
.+.++++|. ..+|. ..|+++.++|.|.|++||.+ +..|...+
T Consensus 7 ~~~~~d~C~-snPC~nga~gtC~~~~g~y~C~C~~Gy~~---G~~C~~~~ 52 (61)
T 2k2s_B 7 LSETPAACS-SNPCGPEAAGTCKETNSGYICRCNQGYRI---SLDGTGNV 52 (61)
T ss_dssp CTTSCCHHH-HCSSCSSSCCEEEECSSEEEEECCTTEEE---EECSSSCE
T ss_pred hcCCCCcCc-CCCCcCCCccccccCCCceEeECCCCCcc---CCCCCCCC
Confidence 356778887 46684 48999999999999999983 23454444
No 116
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.48 E-value=0.0052 Score=59.67 Aligned_cols=43 Identities=23% Similarity=0.675 Sum_probs=33.7
Q ss_pred ccccccc-CCCCCC--ceeeecCCceEEecCCCeEECCCCCccccCCC
Q psy14262 414 VDADECL-IDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNV 458 (482)
Q Consensus 414 ~di~eC~-~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~dide 458 (482)
.+++||. ..+.|. ..|+|+.|+|+|.|.+||.. ++++|.++|+
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G--nG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTG--NGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE--CSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC--CCCcCCCCCC
Confidence 4788997 557885 47999999999999999984 5889999986
No 117
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.47 E-value=0.0092 Score=58.63 Aligned_cols=40 Identities=28% Similarity=0.728 Sum_probs=34.1
Q ss_pred cccccc-C---CCCCCceeeecC------CceEEecCCCeEECCCCCccc
Q psy14262 415 DADECL-I---DGSCDQTCTNTH------LSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 415 di~eC~-~---~~~Cs~~C~n~~------gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
..++|. . ++.|+|.|.+++ ++|+|.|+.||+|..++++|.
T Consensus 266 ~~n~C~~~~~~ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 266 GVNWCERTTLSNGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp CCCTTSSSSSGGGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred ccccccccccCCCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 446676 3 678999999986 589999999999999999995
No 118
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=95.47 E-value=0.0075 Score=68.32 Aligned_cols=34 Identities=38% Similarity=0.849 Sum_probs=32.0
Q ss_pred CceecCCCCeeccCCCCCCCcCCCCCCCCCCCccc
Q psy14262 208 GQFSCGMGKCIPESWKCDGFVDCLEDGSDEPNTCI 242 (482)
Q Consensus 208 ~~f~C~~g~Ci~~~~~CDg~~dC~~dgsDE~~C~~ 242 (482)
+.|+|.+|+||+..|+|||..|| .|+|||.+|..
T Consensus 121 ~~F~C~~g~ci~~~~~c~g~~dC-~d~sde~~C~~ 154 (913)
T 3t5o_A 121 NKFRCDSGRCIARKLECNGENDC-GDNSDERDCGR 154 (913)
T ss_dssp SEEECTTSCEEEGGGSSSSSCCS-SSSGGGTTCSS
T ss_pred cccccCCCceEccceecCCcccC-CCccccccCCC
Confidence 67999999999999999999999 99999999963
No 119
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=95.29 E-value=0.0039 Score=56.01 Aligned_cols=105 Identities=22% Similarity=0.446 Sum_probs=64.7
Q ss_pred CCCCCCCCCCccccCccccc--CCCCccCCCCCCCCCCCCCCCCCcCCCCCCCcCCcCccCcccccCCCcccCCCCcccc
Q psy14262 278 DNTDEDWDKFHQCFNGQVQC--ALSKKCIPHNWLCDEEMDCSTDDIVDNTDEDWDKYFSHNAVLCHPNELRCGSSNQCVA 355 (482)
Q Consensus 278 dgsDE~~C~~~~C~~~~f~C--~~g~~Ci~~~~~CDg~~DC~~g~~~dgsDE~~~~~C~~~~~~C~~~~f~C~~g~~Ci~ 355 (482)
.|.....|....|.. .| .++ .|+. .++| .|..|| .... |. .|... ..|.++ .|+
T Consensus 56 ~G~~G~~C~~~~C~~---~C~~~~g-~C~~-~~~C----~C~~G~-----~G~~---C~----~C~~~-~~C~~g-~C~- 111 (169)
T 2vj2_A 56 EGWMGPECNRAICRQ---GCSPKHG-SCKL-PGDC----RCQYGW-----QGLY---CD----KCIPH-PGCVHG-ICN- 111 (169)
T ss_dssp TTEESTTSCEECCCT---TCCTTTE-ECSS-TTCC----EECTTE-----ESSS---SC----EECCC-TTCSSE-ECS-
T ss_pred CCCcCCCCCCCCCCC---CCCCCCc-ccCC-CCee----ECCCCC-----CCCC---cc----cCCCC-CCCCCC-CcC-
Confidence 444344454334442 24 333 6775 5677 788444 3334 52 23221 237776 787
Q ss_pred cccccCCCCCCCCCCCCCCCCC-CCCCcc-CCCCcC--CCCCC-CCCccccCCCCccCCCCCc
Q psy14262 356 LSKFCDGKPDCSNGEDEGPFCN-NKADCE-NLKCSH--KCSPT-PRGAMCFCPAGQNPNKTQC 413 (482)
Q Consensus 356 ~~~~CDg~~dC~dgsDE~~~C~-~~~~C~-~~~C~~--~C~~~-~~~~~C~C~~G~~~~~~~C 413 (482)
.+++| .|..|+.... |. ..++|. ..+|.+ +|+++ +++|+|.|++|| .+..|
T Consensus 112 ~~~~C----~C~~G~~G~~-C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~--~G~~C 167 (169)
T 2vj2_A 112 EPWQC----LCETNWGGQL-CDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGY--SGPNC 167 (169)
T ss_dssp STTCC----EECTTEETTT-TCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTC--CSTTS
T ss_pred CCCEE----eCCCCCCCCc-ccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCC--cCcCc
Confidence 46777 8888887766 87 223776 467875 78886 788999999999 55555
No 120
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.87 E-value=0.014 Score=57.61 Aligned_cols=42 Identities=31% Similarity=0.767 Sum_probs=35.1
Q ss_pred ccccc-CCCCCCceeeecCC--ceEEecCCCeEECCCCCccccCC
Q psy14262 416 ADECL-IDGSCDQTCTNTHL--SYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 416 i~eC~-~~~~Cs~~C~n~~g--sy~C~C~~Gy~l~~d~~tC~did 457 (482)
.++|. .++.|+|.|...++ +|+|.|+.||+|..++++|.+-+
T Consensus 267 ~n~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 267 TNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp CCTTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 45676 46899999999876 79999999999999999998754
No 121
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=94.64 E-value=0.00087 Score=64.63 Aligned_cols=94 Identities=7% Similarity=0.017 Sum_probs=62.0
Q ss_pred cccCCCCccccc--ccccCCCCCCCCCCCCCCCCCCC-CCccC-CCCcC-CCCCCCCCccccCCCCccCCCCCccccccc
Q psy14262 345 LRCGSSNQCVAL--SKFCDGKPDCSNGEDEGPFCNNK-ADCEN-LKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDADEC 419 (482)
Q Consensus 345 f~C~~g~~Ci~~--~~~CDg~~dC~dgsDE~~~C~~~-~~C~~-~~C~~-~C~~~~~~~~C~C~~G~~~~~~~C~di~eC 419 (482)
..|.++++|+.. +|.| +|+.|+.... |..+ ++|.+ ..|.. .|++ +..| | .+..|..+++|
T Consensus 38 ~~c~ngG~C~~g~~~y~C----~Cp~Gf~G~~-Ce~ni~ec~~~~~c~s~pC~n---ggtc-----~--~G~~c~~~~eC 102 (267)
T 4fbr_A 38 IKSDDGGKTLKGTMTYNG----EGPIGFRGTL-SSANNYTVENQWGGTSAPWQP---GGVW-----V--LGARDKQNIVA 102 (267)
T ss_dssp EECSSTTSEEEEEEEETT----SCCEEEEEEE-CSTTEEEEEEESSSTTSCEEE---EEEE-----E--CCCCSSCCEEE
T ss_pred CCcCCCCeecCCCCCeEE----eCCCCccccc-ccccccccccccCcCCCcccC---CCee-----e--ccCcccccccc
Confidence 478888899986 9999 9999987766 7632 24431 11111 2222 1122 2 45567777888
Q ss_pred cCCCCC--CceeeecCCceEEecCCCeEECCCCCccc-cCCC
Q psy14262 420 LIDGSC--DQTCTNTHLSYVCSCTEGYTLRPDGKSCT-AVNV 458 (482)
Q Consensus 420 ~~~~~C--s~~C~n~~gsy~C~C~~Gy~l~~d~~tC~-dide 458 (482)
+ ..+| ..+|++...+|+|.|+.||+ +..|. ++++
T Consensus 103 ~-s~pC~ngG~C~~~~~sy~C~C~~Gf~----G~~Ce~~~d~ 139 (267)
T 4fbr_A 103 V-SIKSNDGGKTLTGTTTYNGEGPIGFK----SEVTDGDTYS 139 (267)
T ss_dssp E-EEECSSTTSEEEEEEEETTSCCEEEE----EEECCCCEEE
T ss_pred C-CCCCCCCCEEecCCccEEeeCCCCcc----ccCCCCCccc
Confidence 7 3556 46999999999999999998 44554 3444
No 122
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.43 E-value=0.019 Score=62.11 Aligned_cols=54 Identities=37% Similarity=0.873 Sum_probs=44.3
Q ss_pred hhhhhccCCCCCCcceeeCCceecCceeeCCCCCCCcccCCCCCCccccccCCC
Q psy14262 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159 (482)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~ 159 (482)
.+|+++.|+|+.+..+.-...-+|+++..|....-+||.|+..+..+.+.++|.
T Consensus 150 ~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 150 PKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 467888999998888876667789999999888899999988888887766553
No 123
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=94.16 E-value=0.012 Score=39.03 Aligned_cols=32 Identities=28% Similarity=0.780 Sum_probs=24.7
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCcc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~ 414 (482)
+|...+|.+ +|++..++|+|.|++|| .+..|+
T Consensus 5 ~C~~~pC~ngg~C~~~~~~~~C~C~~G~--~G~~Ce 38 (39)
T 1edm_B 5 QCESNPCLNGGSCKDDINSYECWCPFGF--EGKNCE 38 (39)
T ss_dssp TTTTCCCCTTCEEEEETTEEEEECCTTC--CSTTSC
T ss_pred cCCCCCCCCCCEeEcCCCceEeECCCCC--cCCccC
Confidence 566666764 78888899999999999 555553
No 124
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.97 E-value=0.047 Score=39.49 Aligned_cols=36 Identities=28% Similarity=0.671 Sum_probs=26.5
Q ss_pred cccccccCCCCCC--ceee-----ecCCceEEecCCCeEECCCCCccc
Q psy14262 414 VDADECLIDGSCD--QTCT-----NTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 414 ~di~eC~~~~~Cs--~~C~-----n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
.+++||. ..+|. .+|+ +..++|.|.|++||. |+.|+
T Consensus 6 ~~~~eC~-s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~----G~~CE 48 (55)
T 3u7u_G 6 VKCAEKE-KTFCVNGGECFMVKDLSNPSRYLCKCPNEFT----GDRCQ 48 (55)
T ss_dssp EECCSTT-TTTSCTTCEEEEECCC--CCCEEEEECTTEE----STTSC
T ss_pred ccCCCCc-CCCCCCCCCcCCCCccCCCCCEeEeCCCCCc----CCCcC
Confidence 4678887 56783 5884 567889999999998 77886
No 125
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=93.76 E-value=0.044 Score=59.87 Aligned_cols=92 Identities=24% Similarity=0.550 Sum_probs=57.3
Q ss_pred ccCCCCccCCCCCCCCCCCCCC----CCCcCCCCCCCcCCcCccCcccccC-CCcccCCCCcccccccccCCCCCCCCCC
Q psy14262 296 QCALSKKCIPHNWLCDEEMDCS----TDDIVDNTDEDWDKYFSHNAVLCHP-NELRCGSSNQCVALSKFCDGKPDCSNGE 370 (482)
Q Consensus 296 ~C~~g~~Ci~~~~~CDg~~DC~----~g~~~dgsDE~~~~~C~~~~~~C~~-~~f~C~~g~~Ci~~~~~CDg~~dC~dgs 370 (482)
.|.++++|+. +.| .|. .||.+ .. |......|.. ....|.+++.|+. +.| .|..|+
T Consensus 494 ~Cs~~G~C~~--g~C----~C~~~~~~Gy~G-----~~---Ce~~~~~C~~~~~~~C~~~G~C~~--g~C----~C~~Gy 553 (690)
T 3fcs_B 494 VCSQRGECLC--GQC----VCHSSDFGKITG-----KY---CECDDFSCVRYKGEMCSGHGQCSC--GDC----LCDSDW 553 (690)
T ss_dssp GGGGSEEECS--SSE----EECCCSSCCCBS-----TT---SCBCSSCCCBSSSSBGGGSEEEET--TEE----EECTTE
T ss_pred CCCCCCEEEC--Cee----EeecCCCCCeeC-----CC---cCcccCcCcCCCCCCCCCCCEecC--Cee----ECcCCC
Confidence 4776678884 455 666 44432 22 5433345542 2346877668876 667 888888
Q ss_pred CCCCCCC----CCCCccC---CCCcC--CCCCCCCCccccC-CCCccCCCCCccc
Q psy14262 371 DEGPFCN----NKADCEN---LKCSH--KCSPTPRGAMCFC-PAGQNPNKTQCVD 415 (482)
Q Consensus 371 DE~~~C~----~~~~C~~---~~C~~--~C~~~~~~~~C~C-~~G~~~~~~~C~d 415 (482)
.+.. |. .. +|.. .+|.+ +|.+ .+|.| ++|| .+..|+.
T Consensus 554 ~G~~-CeC~~~~~-~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy--~G~~Ce~ 600 (690)
T 3fcs_B 554 TGYY-CNCTTRTD-TCMSSNGLLCSGRGKCEC----GSCVCIQPGS--YGDTCEK 600 (690)
T ss_dssp ESSS-SCEECCCT-TTBCTTSSBTSSSCEEET----TEEECCSTTC--BSTTSCB
T ss_pred cCCC-CccCCCCC-cccCCCCCCCCCCCEEeC----CEEECCCCCc--cCCCcCc
Confidence 7776 76 33 6763 45654 5643 38999 9999 5666754
No 126
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=93.17 E-value=0.069 Score=38.09 Aligned_cols=37 Identities=35% Similarity=0.843 Sum_probs=27.9
Q ss_pred ccccccC--CCCCC--ceee--ecCCceEEecCCCeEECCCCCcccc
Q psy14262 415 DADECLI--DGSCD--QTCT--NTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 415 di~eC~~--~~~Cs--~~C~--n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
++++|.. ..+|. .+|+ +..++|.|.|++||+ |..|+.
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce~ 44 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYS----GDRCQT 44 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCC----SSSSCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCc----CCcCCc
Confidence 4677762 24784 5898 788999999999996 777854
No 127
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=93.17 E-value=0.029 Score=40.59 Aligned_cols=32 Identities=25% Similarity=0.671 Sum_probs=24.4
Q ss_pred CccCCCCcC--CC-----CCCCCCccccCCCCccCCCCCcc
Q psy14262 381 DCENLKCSH--KC-----SPTPRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 381 ~C~~~~C~~--~C-----~~~~~~~~C~C~~G~~~~~~~C~ 414 (482)
||.+.+|.+ +| ++...+|+|.|++|| .+.+|+
T Consensus 10 eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~--~G~~CE 48 (55)
T 3u7u_G 10 EKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEF--TGDRCQ 48 (55)
T ss_dssp STTTTTSCTTCEEEEECCC--CCCEEEEECTTE--ESTTSC
T ss_pred CCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCC--cCCCcC
Confidence 777778876 78 466789999999999 677775
No 128
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=92.94 E-value=0.12 Score=53.34 Aligned_cols=94 Identities=27% Similarity=0.678 Sum_probs=57.3
Q ss_pred ccCCCCcccccccccCCCCCCCCCCCCCCCCCCC-----------CCcc-CCCCcC--CCCCCCCCccccCCCCccCCCC
Q psy14262 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNK-----------ADCE-NLKCSH--KCSPTPRGAMCFCPAGQNPNKT 411 (482)
Q Consensus 346 ~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~-----------~~C~-~~~C~~--~C~~~~~~~~C~C~~G~~~~~~ 411 (482)
.|.+++.|++..+.| .|+.|..+.. |... .+|. +++|.+ .| .++.|.|.|++|| .+.
T Consensus 204 ~C~~~G~C~~~~g~C----~C~~G~~G~~-Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C--~~~~~~C~C~~G~--~G~ 274 (423)
T 2gy5_A 204 ACMNNGVCHEDTGEC----ICPPGFMGRT-CEKACELHTFGRTCKERCSGQEGCKSYVFC--LPDPYGCSCATGW--KGL 274 (423)
T ss_dssp CCCTTCEECTTTCCE----ECCTTEESTT-SCEECCTTEESTTSCEECCSTTTTTTCCEE--ETTTTEEECCBTC--BSG
T ss_pred CCCCCCEEECCCCcE----eCCCCccCCC-cccccCCCCCCCCcCccCCCCCCCCCCCEE--CCCCCeEEeCCCc--ccc
Confidence 577777888877778 7888877766 7631 0232 233332 23 2568999999999 455
Q ss_pred Ccccc-------ccccCCCCCC--ceeeecCCceEEecCCCeEECCCCCcccc
Q psy14262 412 QCVDA-------DECLIDGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 412 ~C~di-------~eC~~~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
.|+.. ..|...=.|. ..|.+.. .|.|++||. |..|..
T Consensus 275 ~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~---~C~C~~G~~----G~~Ce~ 320 (423)
T 2gy5_A 275 QCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ---GCLCSPGWQ----GLQCER 320 (423)
T ss_dssp GGCBCCCTTBCSBTTCCBCCCTTCCEEETTT---EEECCTTCB----STTSCB
T ss_pred cccCccCCCCcCCcccccccCCCCCEecCCC---ceECCCCCc----CCCCcc
Confidence 66530 1121111342 3676653 399999997 667754
No 129
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=92.90 E-value=0.0088 Score=44.34 Aligned_cols=38 Identities=24% Similarity=0.629 Sum_probs=29.6
Q ss_pred CccCCCCcC----CCCCCCCCccccCCCCccCC-CCCcccccccc
Q psy14262 381 DCENLKCSH----KCSPTPRGAMCFCPAGQNPN-KTQCVDADECL 420 (482)
Q Consensus 381 ~C~~~~C~~----~C~~~~~~~~C~C~~G~~~~-~~~C~di~eC~ 420 (482)
+|.+.||.+ +|+++.++|+|.|++|| . +..|....+|.
T Consensus 13 ~C~snPC~nga~gtC~~~~g~y~C~C~~Gy--~~G~~C~~~~~C~ 55 (61)
T 2k2s_B 13 ACSSNPCGPEAAGTCKETNSGYICRCNQGY--RISLDGTGNVTCI 55 (61)
T ss_dssp HHHHCSSCSSSCCEEEECSSEEEEECCTTE--EEEECSSSCEEEE
T ss_pred cCcCCCCcCCCccccccCCCceEeECCCCC--ccCCCCCCCCEec
Confidence 676667764 68999999999999999 5 66787666664
No 130
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=91.77 E-value=0.059 Score=53.68 Aligned_cols=38 Identities=26% Similarity=0.753 Sum_probs=25.9
Q ss_pred Ccc-CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccccc
Q psy14262 381 DCE-NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADE 418 (482)
Q Consensus 381 ~C~-~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~e 418 (482)
||. ++.|+|.|.+++++|+|.|++|| .+++++|..+.+
T Consensus 3 ec~~~~~C~~~C~n~~g~~~C~C~~g~~l~~d~~~C~~~~~ 43 (349)
T 3v64_C 3 ECAEEGYCSQGCTNSEGAFQCWCEAGYELRPDRRSCKALGP 43 (349)
T ss_dssp ------CCSSEECCC---CCEECCTTEEECTTSSCEEESSS
T ss_pred ccCCCCCCcCeeecCCCCeEEECCCCccCCCCCCccccccc
Confidence 675 57899999999999999999999 567889976543
No 131
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=91.50 E-value=0.2 Score=34.21 Aligned_cols=27 Identities=33% Similarity=0.812 Sum_probs=20.6
Q ss_pred CCC--ceee--ecCCceEEecCCCeEECCCCCccc
Q psy14262 424 SCD--QTCT--NTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 424 ~Cs--~~C~--n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
+|. ..|+ +..++|.|.|++||. ++.|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~----G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYS----GDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEE----TTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCc----CCcCC
Confidence 563 4787 677889999999997 67774
No 132
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=91.41 E-value=0.15 Score=37.62 Aligned_cols=39 Identities=31% Similarity=0.644 Sum_probs=28.4
Q ss_pred cccCCCCCC--ceeee-----cCCceEEecCCCeEECCCCCccc-cCCCCCC
Q psy14262 418 ECLIDGSCD--QTCTN-----THLSYVCSCTEGYTLRPDGKSCT-AVNVPQD 461 (482)
Q Consensus 418 eC~~~~~Cs--~~C~n-----~~gsy~C~C~~Gy~l~~d~~tC~-didec~~ 461 (482)
+|. ..+|. ..|++ ..++|.|.|++||. |..|. +|+++..
T Consensus 8 ~C~-~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~----G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 8 EKE-KTFCVNGGECFMVKDLSNPSRYLCKCQPGFT----GARCTENVPMKVQ 54 (63)
T ss_dssp HHH-HTTSCTTCEEEEEESSSSSCCEEEECCTTEE----STTSCEECCSSCT
T ss_pred CCC-CCcCCCCcEEecCCccCCCCCEEEECCCCCc----CCccCcCcCcccc
Confidence 443 34563 57886 67899999999997 78895 7887654
No 133
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=90.88 E-value=0.11 Score=36.94 Aligned_cols=33 Identities=21% Similarity=0.569 Sum_probs=25.2
Q ss_pred CccCC---CCcC--CCC--CCCCCccccCCCCccCCCCCccc
Q psy14262 381 DCENL---KCSH--KCS--PTPRGAMCFCPAGQNPNKTQCVD 415 (482)
Q Consensus 381 ~C~~~---~C~~--~C~--~~~~~~~C~C~~G~~~~~~~C~d 415 (482)
+|... +|.+ +|+ +..++|+|.|++|| .+.+|+.
T Consensus 5 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~--~G~~Ce~ 44 (53)
T 1egf_A 5 GCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGY--SGDRCQT 44 (53)
T ss_dssp CCCTTSSCSSCSSCEEEEESSSSCEEEECCTTC--CSSSSCC
T ss_pred cCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCC--cCCcCCc
Confidence 55533 7765 788 78889999999999 6777853
No 134
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=90.87 E-value=0.16 Score=49.11 Aligned_cols=40 Identities=33% Similarity=0.824 Sum_probs=34.8
Q ss_pred Ccc---CCCCcCCCCCCCCCccccCCCCc--cCCCCCcccccccc
Q psy14262 381 DCE---NLKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDADECL 420 (482)
Q Consensus 381 ~C~---~~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di~eC~ 420 (482)
||. +++|+|.|.++.++|+|.|++|| ..++++|...++|.
T Consensus 4 eC~~~~~~~C~~~C~~~~~~~~C~C~~G~~l~~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 4 ECHPERTDGCQHFCLPGQESYTCSCAQGYRLGEDHKQCVPHDQCA 48 (283)
T ss_dssp CCCSSCSSSCSSBCCCCTTSCCCBCCTTEEECTTSSCEEECSTTC
T ss_pred ccCCCCCCCCCCEeeCCCCCeEecCCCCcccCCCCCccccccccc
Confidence 665 47899999999999999999999 56788999888875
No 135
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=90.80 E-value=0.14 Score=44.91 Aligned_cols=35 Identities=37% Similarity=0.756 Sum_probs=27.4
Q ss_pred CCC--CceeeecCCceEEecCCCeEECCCCCccccCCCCCC
Q psy14262 423 GSC--DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQD 461 (482)
Q Consensus 423 ~~C--s~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~~ 461 (482)
.+| ...|+++.++|+|.|++||. |..|+.+++|+.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----G~~Ce~~~~c~~ 161 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFY----GPECEYVRDDDD 161 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEE----STTSCEECC---
T ss_pred CCCCCCCEEecCCCCceEeCCCCCc----CcccccCcccCC
Confidence 455 35899999999999999998 778999888753
No 136
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=90.32 E-value=0.11 Score=35.57 Aligned_cols=27 Identities=19% Similarity=0.429 Sum_probs=21.3
Q ss_pred CCcC--CCC--CCCCCccccCCCCccCCCCCcc
Q psy14262 386 KCSH--KCS--PTPRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 386 ~C~~--~C~--~~~~~~~C~C~~G~~~~~~~C~ 414 (482)
+|.+ +|+ +..++|+|.|++|| .+.+|+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~--~G~~Ce 40 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGY--SGDRCQ 40 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTE--ETTTTC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCC--cCCcCC
Confidence 6665 686 67789999999999 566774
No 137
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=90.24 E-value=0.043 Score=40.62 Aligned_cols=38 Identities=21% Similarity=0.543 Sum_probs=27.2
Q ss_pred CccCCCCcC--CCCC-----CCCCccccCCCCccCCCCCcc-cccccc
Q psy14262 381 DCENLKCSH--KCSP-----TPRGAMCFCPAGQNPNKTQCV-DADECL 420 (482)
Q Consensus 381 ~C~~~~C~~--~C~~-----~~~~~~C~C~~G~~~~~~~C~-di~eC~ 420 (482)
+|.+.+|.+ +|++ ..++|+|.|++|| .+..|+ +++++.
T Consensus 8 ~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf--~G~~Ce~~i~~~~ 53 (63)
T 1hae_A 8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGF--TGARCTENVPMKV 53 (63)
T ss_dssp HHHHTTSCTTCEEEEEESSSSSCCEEEECCTTE--ESTTSCEECCSSC
T ss_pred CCCCCcCCCCcEEecCCccCCCCCEEEECCCCC--cCCccCcCcCccc
Confidence 444556654 6764 5678999999999 677785 677664
No 138
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=90.21 E-value=0.19 Score=51.69 Aligned_cols=55 Identities=31% Similarity=0.805 Sum_probs=36.6
Q ss_pred CCCCCCCCccccCCCCccCCCCCcccc-----------ccccCCCCCCc--eeeecCCceEEecCCCeEECCCCCccc
Q psy14262 390 KCSPTPRGAMCFCPAGQNPNKTQCVDA-----------DECLIDGSCDQ--TCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 390 ~C~~~~~~~~C~C~~G~~~~~~~C~di-----------~eC~~~~~Cs~--~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
+|.+ ..+.|.|++|| .+..|+.. ++|...+.|.+ .| .+++|+|.|++||. +..|.
T Consensus 210 ~C~~--~~g~C~C~~G~--~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C--~~~~~~C~C~~G~~----G~~C~ 277 (423)
T 2gy5_A 210 VCHE--DTGECICPPGF--MGRTCEKACELHTFGRTCKERCSGQEGCKSYVFC--LPDPYGCSCATGWK----GLQCN 277 (423)
T ss_dssp EECT--TTCCEECCTTE--ESTTSCEECCTTEESTTSCEECCSTTTTTTCCEE--ETTTTEEECCBTCB----SGGGC
T ss_pred EEEC--CCCcEeCCCCc--cCCCcccccCCCCCCCCcCccCCCCCCCCCCCEE--CCCCCeEEeCCCcc----ccccc
Confidence 5654 46789999999 45566531 23443455643 45 46889999999997 55554
No 139
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=89.69 E-value=0.24 Score=34.23 Aligned_cols=37 Identities=30% Similarity=0.691 Sum_probs=25.2
Q ss_pred ccccccC--CCCCC-ceeeecC--CceEEecCCCeEECCCCCcccc
Q psy14262 415 DADECLI--DGSCD-QTCTNTH--LSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 415 di~eC~~--~~~Cs-~~C~n~~--gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
++++|.. ..+|. +.|+... ++|.|.|++||+ |..|+-
T Consensus 2 ~i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYT----GVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCS----STTSCC
T ss_pred ccccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCc----cCCCCc
Confidence 3556652 25674 4788754 689999999997 667753
No 140
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=89.46 E-value=0.14 Score=55.96 Aligned_cols=88 Identities=27% Similarity=0.657 Sum_probs=53.3
Q ss_pred cccCCCCcccccccccCCCCCCC------CCCCCCCCCC--CCCCcc---CCCCcC----CCCCCCCCccccCCCCccCC
Q psy14262 345 LRCGSSNQCVALSKFCDGKPDCS------NGEDEGPFCN--NKADCE---NLKCSH----KCSPTPRGAMCFCPAGQNPN 409 (482)
Q Consensus 345 f~C~~g~~Ci~~~~~CDg~~dC~------dgsDE~~~C~--~~~~C~---~~~C~~----~C~~~~~~~~C~C~~G~~~~ 409 (482)
..|.+++.|+.. .| .|. .|+-+.. |. .. .|. ..+|.. +|.. .+|.|++|| .
T Consensus 482 ~~Cs~~G~C~~G--~C----~C~~~~~~~~G~~G~~-Ce~~~~-~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~--~ 547 (687)
T 3k6s_B 482 IICSGLGDCVCG--QC----LCHTSDVPGKLIYGQY-CECDTI-NCERYNGQVCGGPGRGLCFC----GKCRCHPGF--E 547 (687)
T ss_dssp CGGGSSEEEETT--EE----EECCCCSTTCCEESTT-SCEESS-CSCEETTEETSHHHHEEEET----TEEEECTTC--C
T ss_pred CcCCCCCEEeCC--EE----EcCCCCCCCCCccccc-cccccc-cccCCCCcCcCCCCCCeEEC----CEEEcCCCC--c
Confidence 357776688742 55 777 6666655 75 33 565 224542 4542 379999999 5
Q ss_pred CCCcc---ccccccC--CCCCC--ceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 410 KTQCV---DADECLI--DGSCD--QTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 410 ~~~C~---di~eC~~--~~~Cs--~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
+..|. +++.|.. ...|+ ..|.. .+|.|.+||. |..|.
T Consensus 548 G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~----G~~Ce 591 (687)
T 3k6s_B 548 GSACQCERTTEGCLNPRRVECSGRGRCRC----NVCECHSGYQ----LPLCQ 591 (687)
T ss_dssp STTSCSCCSSCTTBCTTCSBTSSSCCBCS----SCBCCSTTCC----TTTTC
T ss_pred CCCCccCCCCCCCCCCCCCCCCCCCcCCC----CEEECCCCCc----CCCCC
Confidence 66675 2456652 23563 35655 4699999987 55554
No 141
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=88.56 E-value=0.072 Score=46.78 Aligned_cols=38 Identities=24% Similarity=0.549 Sum_probs=28.9
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCcccccccc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVDADECL 420 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~ 420 (482)
+|...+|++ +|.+..++|.|.|++|| .+..|+.+++|.
T Consensus 121 ~c~~~~C~~~g~C~~~~~~~~c~C~~g~--~G~~Ce~~~~c~ 160 (162)
T 1g1s_A 121 SCQDMSCSKQGECLETIGNYTCSCYPGF--YGPECEYVRDDD 160 (162)
T ss_dssp CCCTTGGGGSEEEEECSSSEEEEECTTE--ESTTSCEECC--
T ss_pred CCcCCCCCCCCEEecCCCCceEeCCCCC--cCcccccCcccC
Confidence 455556654 78888999999999999 667899888886
No 142
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=87.90 E-value=0.14 Score=45.47 Aligned_cols=30 Identities=37% Similarity=0.846 Sum_probs=25.9
Q ss_pred CcCCCCCCCCCccccCCCCc--cCCCCCcccc
Q psy14262 387 CSHKCSPTPRGAMCFCPAGQ--NPNKTQCVDA 416 (482)
Q Consensus 387 C~~~C~~~~~~~~C~C~~G~--~~~~~~C~di 416 (482)
|++.|.+++++|.|.|++|| ..++++|.++
T Consensus 137 C~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~~~ 168 (170)
T 1szb_A 137 CDHHCHNHLGGFYCSCRAGYVLHRNKRTCSEQ 168 (170)
T ss_dssp SSSEEEEETTEEEEECCTTEEECTTSSCEEEC
T ss_pred cCCccccCCCCEEEeCCCCcEECCCCCccccc
Confidence 88899999999999999999 4677888654
No 143
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=87.85 E-value=0.18 Score=38.29 Aligned_cols=40 Identities=40% Similarity=0.903 Sum_probs=31.2
Q ss_pred cccccc-CCCCCC--ceeeecCCceEEe---------------------------cCCCeEECCCCCcccc
Q psy14262 415 DADECL-IDGSCD--QTCTNTHLSYVCS---------------------------CTEGYTLRPDGKSCTA 455 (482)
Q Consensus 415 di~eC~-~~~~Cs--~~C~n~~gsy~C~---------------------------C~~Gy~l~~d~~tC~d 455 (482)
+|+||. ....|. +.|+|++|+|+|. |++||+|. .+.+|.|
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~Gy~~~-~~~~C~D 71 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPPVPPAQHPNPCPPGYEPD-DQDSCVD 71 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCCSSCSCSSCCCSCTTEEEE-CCCCSCC
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCccccccccCccccCCCCCeeeC-CCCcccC
Confidence 057786 456784 5899999999999 99999997 5666764
No 144
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=87.44 E-value=0.086 Score=51.08 Aligned_cols=40 Identities=30% Similarity=0.583 Sum_probs=33.1
Q ss_pred Ccc--CCCCcC--CCCCCCCCccccCCCCccCCCCCcccccccc
Q psy14262 381 DCE--NLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVDADECL 420 (482)
Q Consensus 381 ~C~--~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~ 420 (482)
||. .+.|.. .|.|++++|.|.|++||..++..|.++++..
T Consensus 7 EC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 7 TCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGSPQ 50 (285)
T ss_dssp CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEETTCEE
T ss_pred hccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCCCCc
Confidence 676 567764 7999999999999999966788999887743
No 145
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.40 E-value=0.12 Score=53.96 Aligned_cols=75 Identities=27% Similarity=0.770 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCCCCCCccCCCCcC-CCCCCCCCccccCCCCccCCCCCccccccccCCCCCC--ceeeecCCceEEecC
Q psy14262 365 DCSNGEDEGPFCNNKADCENLKCSH-KCSPTPRGAMCFCPAGQNPNKTQCVDADECLIDGSCD--QTCTNTHLSYVCSCT 441 (482)
Q Consensus 365 dC~dgsDE~~~C~~~~~C~~~~C~~-~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~~~~~Cs--~~C~n~~gsy~C~C~ 441 (482)
.|..+.-... |... +|.. +|.+ +|.+. ++|.|++|| .+..|. +++|.. +|+ ..|++. ++|.|.
T Consensus 380 ~C~~~~~g~~-c~~~-~C~~-~C~nG~C~~~---~~C~C~~G~--~G~~C~-~~~C~~--~C~~~g~C~~~---~~C~C~ 445 (463)
T 2wg3_C 380 ECRATVQPAQ-TLTS-ECSR-LCRNGYCTPT---GKCCCSPGW--EGDFCR-TAKCEP--ACRHGGVCVRP---NKCLCK 445 (463)
T ss_dssp GGCCCCCCCC-CCCC-HHHH-HCCSEEECTT---SCEEECTTE--ESTTSC-EECC------------------------
T ss_pred cCCCCCcCCC-Cccc-cccC-CCCCCccCCC---CeECCCCCc--CCCcCC-cCcCCC--CCCCCCEECCC---CEEECC
Confidence 4454544444 6554 5653 3554 66542 489999999 566784 567762 774 378765 799999
Q ss_pred CCeEECCCCCccccCC
Q psy14262 442 EGYTLRPDGKSCTAVN 457 (482)
Q Consensus 442 ~Gy~l~~d~~tC~did 457 (482)
+||. +..|...+
T Consensus 446 ~G~~----G~~C~~~~ 457 (463)
T 2wg3_C 446 KGYL----GPQCEQVD 457 (463)
T ss_dssp ----------------
T ss_pred CCcc----cCCCCCCc
Confidence 9997 67776544
No 146
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=87.25 E-value=0.35 Score=39.39 Aligned_cols=66 Identities=24% Similarity=0.464 Sum_probs=49.3
Q ss_pred CCCC-CCCCccccCCCCccCCCCCcccccc-cc-CCCCC--CceeeecC-CceEEecCCCeEE-CCCCCcccc
Q psy14262 390 KCSP-TPRGAMCFCPAGQNPNKTQCVDADE-CL-IDGSC--DQTCTNTH-LSYVCSCTEGYTL-RPDGKSCTA 455 (482)
Q Consensus 390 ~C~~-~~~~~~C~C~~G~~~~~~~C~di~e-C~-~~~~C--s~~C~n~~-gsy~C~C~~Gy~l-~~d~~tC~d 455 (482)
.|.. .++.-.|.|..||..++..|..++. |. .++.| ...|..+. .-..|.|.++|.- ..+|..|..
T Consensus 23 ~C~r~~~G~e~CrCl~gY~~dg~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~~~~GvfC~~ 95 (105)
T 1n1i_A 23 ACYRYLDGTEEWRCLLGFKEVGGKCVPASITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEPLFEGVFCSS 95 (105)
T ss_dssp EEEECTTSCEEEEECTTEEECSSSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCEEGGGTEECC
T ss_pred CeEECCCCCEeEEEECCeeccCCEEEECCcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCccccceEEECC
Confidence 4554 6777899999999667888988888 76 67889 46898884 7789999999742 224555543
No 147
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=86.66 E-value=0.11 Score=36.85 Aligned_cols=41 Identities=32% Similarity=0.707 Sum_probs=27.7
Q ss_pred ccccCCCCccCCCCCccccccccCCCCCCceeee----cCCceEEecCCCeEECCCCCccc
Q psy14262 398 AMCFCPAGQNPNKTQCVDADECLIDGSCDQTCTN----THLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 398 ~~C~C~~G~~~~~~~C~di~eC~~~~~Cs~~C~n----~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
++|.|++||. .+.|.+. ..|++ ..++|.|.|++||. |..|+
T Consensus 3 ~~C~C~~g~~--------~~pC~NG----GtC~~~~~~~~~~y~C~C~~Gf~----G~~Ce 47 (52)
T 3ca7_A 3 PTYKCPETFD--------AWYCLND----AHCFAVKIADLPVYSCECAIGFM----GQRCE 47 (52)
T ss_dssp CCBCCCHHHH--------HHTSCTT----CEEEEEEETTEEEEEEECCTTEE----STTSC
T ss_pred eeeECCCCCc--------CCcCCCC----CEEecCccCCCCCEEEECCCCCc----CCCCc
Confidence 4688999882 1233322 35665 35689999999998 66775
No 148
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=85.42 E-value=0.19 Score=34.76 Aligned_cols=28 Identities=25% Similarity=0.553 Sum_probs=20.7
Q ss_pred CCCcC-CCCCC--CCCccccCCCCccCCCCCcc
Q psy14262 385 LKCSH-KCSPT--PRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 385 ~~C~~-~C~~~--~~~~~C~C~~G~~~~~~~C~ 414 (482)
++|.+ +|... .++|.|.|++|| .+.+|+
T Consensus 12 ~pC~nG~C~~~~~~~~~~C~C~~Gy--tG~~Ce 42 (46)
T 1k36_A 12 GYCLHGQCIYLVDMSQNYCRCEVGY--TGVRCE 42 (46)
T ss_dssp SSCSSEEEEEETTTTEEEEEECTTC--SSTTSC
T ss_pred CCCCCCEeeccCCCCCEEEECCCCC--ccCCCC
Confidence 56665 67653 368999999999 667775
No 149
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=83.77 E-value=0.47 Score=38.35 Aligned_cols=56 Identities=25% Similarity=0.613 Sum_probs=42.9
Q ss_pred CCCC-CCCCccccCCCCccCCCCCcccc--cccc-CCCCCC--ceeeecC-----CceEEecCCCeE
Q psy14262 390 KCSP-TPRGAMCFCPAGQNPNKTQCVDA--DECL-IDGSCD--QTCTNTH-----LSYVCSCTEGYT 445 (482)
Q Consensus 390 ~C~~-~~~~~~C~C~~G~~~~~~~C~di--~eC~-~~~~Cs--~~C~n~~-----gsy~C~C~~Gy~ 445 (482)
.|.. .++...|.|.+||..++..|..+ ..|+ .++.|. ..|..+. +...|.|.+||.
T Consensus 17 ~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 4544 46788999999996677889776 4787 558883 5888774 568999999975
No 150
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=83.07 E-value=0.73 Score=49.78 Aligned_cols=53 Identities=36% Similarity=0.653 Sum_probs=41.6
Q ss_pred hhhhhccCCCCCCcceeeCCceecCceeeCCCCCCCcccCCCCCCccccccCCC
Q psy14262 106 ERLEKAGMHGENRSPLVTKNIQWPSSLVIDYNQDILYWCDSHLNTVESVRVDGS 159 (482)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~ci~~~~~cdg~~dc~dw~d~~~~sdE~~~~~~~ 159 (482)
.+|+++.|+|+.+..+. .+.=+|+++..|....-+||.|+..+..+.+.++|.
T Consensus 146 ~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 146 PKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp CEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 46788889998887765 356688999999888889999988887777666553
No 151
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=80.37 E-value=0.49 Score=41.17 Aligned_cols=31 Identities=29% Similarity=0.670 Sum_probs=25.6
Q ss_pred CCCcCCCCCCCCCccccCCCCc--cCCCCCccc
Q psy14262 385 LKCSHKCSPTPRGAMCFCPAGQ--NPNKTQCVD 415 (482)
Q Consensus 385 ~~C~~~C~~~~~~~~C~C~~G~--~~~~~~C~d 415 (482)
.+|++.|.+.+++|.|.|++|| ..++++|.+
T Consensus 126 ~~C~~~C~n~~g~~~C~C~~Gy~l~~~~~~C~~ 158 (159)
T 1nzi_A 126 VPCSHFCNNFIGGYFCSCPPEYFLHDDMKNCGV 158 (159)
T ss_dssp CCSSSEEEEETTEEEEECCTTCEECTTSSCEEC
T ss_pred CCCCCcccCcCCCEEEecCCCcEECCCCCcccc
Confidence 4688889999999999999999 456777753
No 152
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=80.27 E-value=0.76 Score=50.10 Aligned_cols=61 Identities=28% Similarity=0.800 Sum_probs=38.7
Q ss_pred cccCC--CCcccccccccCCCCCCCCCCCCCCCCC----CCCCccC---CCCcC--CCCCCCCCccccCCCCccCCCCCc
Q psy14262 345 LRCGS--SNQCVALSKFCDGKPDCSNGEDEGPFCN----NKADCEN---LKCSH--KCSPTPRGAMCFCPAGQNPNKTQC 413 (482)
Q Consensus 345 f~C~~--g~~Ci~~~~~CDg~~dC~dgsDE~~~C~----~~~~C~~---~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C 413 (482)
..|.+ ++.|+. .+| .|..|+-+.. |. .. .|.. .+|+. +|.. ++|.|++|| .+..|
T Consensus 525 ~~C~~~~~G~C~~--g~C----~C~~G~~G~~-Cec~~~~~-~C~~~~g~~Cs~~G~C~~----g~C~C~~Gy--~G~~C 590 (687)
T 3k6s_B 525 QVCGGPGRGLCFC--GKC----RCHPGFEGSA-CQCERTTE-GCLNPRRVECSGRGRCRC----NVCECHSGY--QLPLC 590 (687)
T ss_dssp EETSHHHHEEEET--TEE----EECTTCCSTT-SCSCCSSC-TTBCTTCSBTSSSCCBCS----SCBCCSTTC--CTTTT
T ss_pred cCcCCCCCCeEEC--CEE----EcCCCCcCCC-CccCCCCC-CCCCCCCCCCCCCCcCCC----CEEECCCCC--cCCCC
Confidence 34665 447764 245 8888888777 86 23 5653 25654 5654 579999999 66667
Q ss_pred cccccc
Q psy14262 414 VDADEC 419 (482)
Q Consensus 414 ~di~eC 419 (482)
+.-..|
T Consensus 591 e~c~~C 596 (687)
T 3k6s_B 591 QECPGC 596 (687)
T ss_dssp CCCTTS
T ss_pred CCCCCC
Confidence 643334
No 153
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=79.96 E-value=0.52 Score=46.19 Aligned_cols=37 Identities=38% Similarity=0.740 Sum_probs=29.0
Q ss_pred Ccc--CCCCcCCCCCCCC--CccccCCCCc--cCCCCCccccc
Q psy14262 381 DCE--NLKCSHKCSPTPR--GAMCFCPAGQ--NPNKTQCVDAD 417 (482)
Q Consensus 381 ~C~--~~~C~~~C~~~~~--~~~C~C~~G~--~~~~~~C~di~ 417 (482)
+|. +++|++.|...++ +|+|.|+.|| ..++++|.+-+
T Consensus 269 ~C~~~ng~Cs~~C~~~~~~~~~~C~C~~g~~l~~d~~~c~~~~ 311 (318)
T 3sov_A 269 PCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGN 311 (318)
T ss_dssp TTTTTGGGCSSEEEECSSTTSEEEECSTTCCBCTTSSCBCC--
T ss_pred ccccCCCCcceEEecCCCCCCeEEECCCCCEECCCCCCCCCCC
Confidence 565 5689999998776 7999999999 67888897654
No 154
>1nt0_A MAsp2, mannose-binding protein associated serine proteas; CUB domain, EGF like domain., hydrolase, sugar binding protein; HET: NAG EDO; 2.70A {Rattus norvegicus} SCOP: b.23.1.1 b.23.1.1 g.3.11.1
Probab=77.49 E-value=1.6 Score=42.04 Aligned_cols=32 Identities=34% Similarity=0.832 Sum_probs=28.1
Q ss_pred CCCCceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 423 ~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
..|.+.|.|+.|+|.|.|.+||.|..+.++|.
T Consensus 131 ~~c~~~C~n~~g~~~csC~~Gy~L~~d~~~C~ 162 (286)
T 1nt0_A 131 VPCDHYCHXYLGGYYCSCRVGYILHQNKHTCS 162 (286)
T ss_dssp -CCSSEEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred ccCCCccccccCceEeecCCCceeccCCCCcc
Confidence 45899999999999999999999998888775
No 155
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=77.24 E-value=1 Score=43.78 Aligned_cols=31 Identities=32% Similarity=0.779 Sum_probs=25.4
Q ss_pred CCCCcCCCCCCC------CCccccCCCCc--cCCCCCcc
Q psy14262 384 NLKCSHKCSPTP------RGAMCFCPAGQ--NPNKTQCV 414 (482)
Q Consensus 384 ~~~C~~~C~~~~------~~~~C~C~~G~--~~~~~~C~ 414 (482)
+++|+|.|.+.+ ++|+|.|+.|| .+++++|.
T Consensus 277 ng~Cs~~C~~~p~~~~~~~~~~C~C~~g~~l~~d~~~C~ 315 (316)
T 1ijq_A 277 NGGCQYLCLPAPQINPHSPKFTCACPDGMLLARDMRSCL 315 (316)
T ss_dssp GGGCSSEEEECCCCSTTCCSEEEECCTTCEECTTSSCEE
T ss_pred CCCcCcccCCCccccCCCCCeEeeCCCCCEECCCCCccC
Confidence 567999998765 57999999999 66788874
No 156
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=75.98 E-value=1.5 Score=31.12 Aligned_cols=29 Identities=34% Similarity=0.901 Sum_probs=21.9
Q ss_pred CCCC--ceee--ecCCceEEecCCCeEECCCCCcccc
Q psy14262 423 GSCD--QTCT--NTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 423 ~~Cs--~~C~--n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
.+|. .+|+ +..++|.|.|++||. |..|+.
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~Gyt----G~~Ce~ 44 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYI----GERCQY 44 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEE----STTSCE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCc----CCCCCc
Confidence 4553 4787 567889999999998 777853
No 157
>3dem_A Complement factor MAsp-3; complement system, innate immunity, calcium binding sites, C pathway, EGF-like domain, glycoprotein, hydrolase; HET: NAG; 2.30A {Homo sapiens}
Probab=75.63 E-value=1.9 Score=41.00 Aligned_cols=32 Identities=44% Similarity=0.907 Sum_probs=28.6
Q ss_pred CCCCceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 423 GSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 423 ~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
..|.+.|.|..|++.|.|.+||.|..+.++|.
T Consensus 132 ~~c~~~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 163 (278)
T 3dem_A 132 LSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (278)
T ss_dssp CCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred ccCCcCcCCccCCcEEEeCCcceeccCCCCCc
Confidence 47889999999999999999999988888775
No 158
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=73.74 E-value=0.62 Score=33.11 Aligned_cols=28 Identities=25% Similarity=0.494 Sum_probs=20.8
Q ss_pred CCCcC--CCC--CCCCCccccCCCCccCCCCCcc
Q psy14262 385 LKCSH--KCS--PTPRGAMCFCPAGQNPNKTQCV 414 (482)
Q Consensus 385 ~~C~~--~C~--~~~~~~~C~C~~G~~~~~~~C~ 414 (482)
.+|.+ +|. +..++|+|.|++|| .+.+|+
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~Gy--tG~~Ce 43 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGY--IGERCQ 43 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTE--ESTTSC
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCC--cCCCCC
Confidence 44544 676 56778999999999 666775
No 159
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=60.48 E-value=5.3 Score=34.53 Aligned_cols=34 Identities=35% Similarity=0.792 Sum_probs=25.1
Q ss_pred CCC--CceeeecCCceEEecCCCeEECCCCCccccCCCCC
Q psy14262 423 GSC--DQTCTNTHLSYVCSCTEGYTLRPDGKSCTAVNVPQ 460 (482)
Q Consensus 423 ~~C--s~~C~n~~gsy~C~C~~Gy~l~~d~~tC~didec~ 460 (482)
..| ...|++..++|.|.|.+||. +..|+.+.+|.
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~----g~~C~~~~~c~ 160 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYY----GPQCQFVQVDP 160 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCB----SSSSCBC----
T ss_pred CcCCCCCeecccCCCceeeeCCCcc----cccccccccCc
Confidence 445 35899999999999999997 77898888774
No 160
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=59.59 E-value=1.6 Score=45.18 Aligned_cols=56 Identities=30% Similarity=0.735 Sum_probs=21.4
Q ss_pred ccCCCCcccccccccCCCCCCCCCCCCCCCCCCCCCccCCCCcC--CCCCCCCCccccCCCCccCCCCCccc
Q psy14262 346 RCGSSNQCVALSKFCDGKPDCSNGEDEGPFCNNKADCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVD 415 (482)
Q Consensus 346 ~C~~g~~Ci~~~~~CDg~~dC~dgsDE~~~C~~~~~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~d 415 (482)
.|.+| .|+.. ..| .|..|..... |... +|.. +|++ +|.+. +.|.|++|| .+..|+.
T Consensus 398 ~C~nG-~C~~~-~~C----~C~~G~~G~~-C~~~-~C~~-~C~~~g~C~~~---~~C~C~~G~--~G~~C~~ 455 (463)
T 2wg3_C 398 LCRNG-YCTPT-GKC----CCSPGWEGDF-CRTA-KCEP-ACRHGGVCVRP---NKCLCKKGY--LGPQCEQ 455 (463)
T ss_dssp HCCSE-EECTT-SCE----EECTTEESTT-SCEE-CC-----------------------------------
T ss_pred CCCCC-ccCCC-CeE----CCCCCcCCCc-CCcC-cCCC-CCCCCCEECCC---CEEECCCCc--ccCCCCC
Confidence 47775 88864 367 8999987777 8765 7866 7765 67653 689999999 6666754
No 161
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=56.01 E-value=5.8 Score=41.59 Aligned_cols=50 Identities=28% Similarity=0.728 Sum_probs=10.8
Q ss_pred CccccCCCCccCCCCCcc-----------cccccc-----CCCCCCceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 397 GAMCFCPAGQNPNKTQCV-----------DADECL-----IDGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 397 ~~~C~C~~G~~~~~~~C~-----------di~eC~-----~~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
.+.|.|++|| .+..|. ++++|. ..+.+...|.. ..++|.|++||. |..|.
T Consensus 459 tg~C~C~~g~--~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~--~tG~C~C~~G~~----G~~Ce 524 (525)
T 4aqs_A 459 TGYCYCKRLV--TGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSE--DSGQCSCLPHMI----GRQCN 524 (525)
T ss_dssp TCCBCBCTTC--CSTTTCC-------------------------------------------------------
T ss_pred CCEEECCCCC--cCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCC--CCCeeECCCCCc----CCCCC
Confidence 4578888888 455553 233343 11222334432 345899999997 66664
No 162
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=54.37 E-value=2.4 Score=36.81 Aligned_cols=35 Identities=23% Similarity=0.385 Sum_probs=24.0
Q ss_pred CCCCcC--CCCCCCCCccccCCCCccCCCCCcccccccc
Q psy14262 384 NLKCSH--KCSPTPRGAMCFCPAGQNPNKTQCVDADECL 420 (482)
Q Consensus 384 ~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C~di~eC~ 420 (482)
..+|+. +|.+...+|.|.|.+|| .+..|+.+.+|.
T Consensus 124 ~~~C~~~g~C~~~~~~~~c~C~~g~--~g~~C~~~~~c~ 160 (164)
T 3cfw_A 124 PWSCSGHGECVEIINNYTCNCDVGY--YGPQCQFVQVDP 160 (164)
T ss_dssp TTSSCSSEEEEEETTEEEEEECTTC--BSSSSCBC----
T ss_pred CCcCCCCCeecccCCCceeeeCCCc--ccccccccccCc
Confidence 344542 67777889999999999 667798888874
No 163
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=49.94 E-value=6.1 Score=36.55 Aligned_cols=49 Identities=24% Similarity=0.658 Sum_probs=31.8
Q ss_pred ccccCCCCcc----CCCCCcc-ccccccC--CCCCC----ceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 398 AMCFCPAGQN----PNKTQCV-DADECLI--DGSCD----QTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 398 ~~C~C~~G~~----~~~~~C~-di~eC~~--~~~Cs----~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
..|.|.+||. ..+..|+ ++..|.. ..+|+ ..|.. .+|.|.+||. +..|.
T Consensus 154 g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~----G~~C~ 213 (217)
T 2p28_B 154 GQCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFE----GSACQ 213 (217)
T ss_dssp TEEEECCCCSTTCCEESTTSCEESSCSCEETTEETTCTTTEEEET----TEEEECTTEE----STTSC
T ss_pred CceECCCCCCCcccEECCCcccCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCc----cCCcC
Confidence 4799999941 1566775 3556751 12463 46764 3899999998 56663
No 164
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=49.39 E-value=3.7 Score=43.54 Aligned_cols=32 Identities=25% Similarity=0.618 Sum_probs=24.1
Q ss_pred CccCCCCcC--CCCC-CCCCccccCC-CCccCCCCCcc
Q psy14262 381 DCENLKCSH--KCSP-TPRGAMCFCP-AGQNPNKTQCV 414 (482)
Q Consensus 381 ~C~~~~C~~--~C~~-~~~~~~C~C~-~G~~~~~~~C~ 414 (482)
+|.++||++ +|.+ ..++|.|.|+ +|| .|..|+
T Consensus 4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~--~G~~Ce 39 (553)
T 1q4g_A 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGY--SGPNCT 39 (553)
T ss_dssp GGGGCCCCTTCEEEEETTTEEEEECTTSSE--ETTTTC
T ss_pred cCCCCCCCCCCCcCCCCCCceEeeCCCCCc--CCCCCC
Confidence 566667765 6877 7778888888 888 566675
No 165
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=47.97 E-value=11 Score=39.83 Aligned_cols=34 Identities=35% Similarity=0.880 Sum_probs=27.7
Q ss_pred cccccCCCCCC--ceeee-cCCceEEecC-CCeEECCCCCccc
Q psy14262 416 ADECLIDGSCD--QTCTN-THLSYVCSCT-EGYTLRPDGKSCT 454 (482)
Q Consensus 416 i~eC~~~~~Cs--~~C~n-~~gsy~C~C~-~Gy~l~~d~~tC~ 454 (482)
+++|. ..+|. +.|++ ..++|.|.|+ +||. |+.|+
T Consensus 2 ~d~C~-~~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce 39 (553)
T 1q4g_A 2 VNPCC-YYPCQHQGICVRFGLDRYQCDCTRTGYS----GPNCT 39 (553)
T ss_dssp CCGGG-GCCCCTTCEEEEETTTEEEEECTTSSEE----TTTTC
T ss_pred CCcCC-CCCCCCCCCcCCCCCCceEeeCCCCCcC----CCCCC
Confidence 45676 46784 58999 8999999999 9998 78885
No 166
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=42.95 E-value=12 Score=26.79 Aligned_cols=27 Identities=26% Similarity=0.723 Sum_probs=19.6
Q ss_pred ceeee----cCCceEEecCCCeEECCCCCccccCC
Q psy14262 427 QTCTN----THLSYVCSCTEGYTLRPDGKSCTAVN 457 (482)
Q Consensus 427 ~~C~n----~~gsy~C~C~~Gy~l~~d~~tC~did 457 (482)
+.|+. ..++|.|.|++||. |..|+..+
T Consensus 20 GtC~~~~~~~~~~~~C~C~~Gf~----G~~Ce~~~ 50 (58)
T 3ltf_D 20 AHCFAVKIADLPVYSCECAIGFM----GQRCEYKE 50 (58)
T ss_dssp CEEEEEEETTEEEEEEEECTTEE----SSSSCEEC
T ss_pred CEEeCCccCCCCCEEeECCCCCc----cCCCcccC
Confidence 36663 34578999999998 77886544
No 167
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=39.66 E-value=20 Score=38.23 Aligned_cols=35 Identities=34% Similarity=0.938 Sum_probs=25.3
Q ss_pred cccccCCCCCC--ceeee-cCCceEEecC-CCeEECCCCCcccc
Q psy14262 416 ADECLIDGSCD--QTCTN-THLSYVCSCT-EGYTLRPDGKSCTA 455 (482)
Q Consensus 416 i~eC~~~~~Cs--~~C~n-~~gsy~C~C~-~Gy~l~~d~~tC~d 455 (482)
+++|. ..+|. +.|++ ..++|.|.|+ +||. |+.|+.
T Consensus 1 vd~C~-s~PC~ngG~C~~~~~~~y~C~C~~~G~~----G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCC-SNPCQNRGECMSTGFDQYKCDCTRTGFY----GENCTT 39 (587)
T ss_dssp CCTTT-TCCCCTTCEEEEEETTEEEEECTTSSEE----TTTTCE
T ss_pred CCCCC-CCCCCCCCEeeCCCCCCeEEecCCCCcc----CCCCCC
Confidence 35665 45774 58885 4588999999 9997 777753
No 168
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=37.57 E-value=7.4 Score=41.50 Aligned_cols=32 Identities=22% Similarity=0.550 Sum_probs=25.1
Q ss_pred CccCCCCcC--CCCC-CCCCccccCC-CCccCCCCCcc
Q psy14262 381 DCENLKCSH--KCSP-TPRGAMCFCP-AGQNPNKTQCV 414 (482)
Q Consensus 381 ~C~~~~C~~--~C~~-~~~~~~C~C~-~G~~~~~~~C~ 414 (482)
+|.++||++ +|.+ ..++|.|.|+ +|| .|..|+
T Consensus 3 ~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~--~G~~Ce 38 (587)
T 3nt1_A 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGF--YGENCT 38 (587)
T ss_dssp TTTTCCCCTTCEEEEEETTEEEEECTTSSE--ETTTTC
T ss_pred CCCCCCCCCCCEeeCCCCCCeEEecCCCCc--cCCCCC
Confidence 677777876 7885 4478999999 999 677785
No 169
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=29.69 E-value=28 Score=28.78 Aligned_cols=56 Identities=14% Similarity=0.329 Sum_probs=34.9
Q ss_pred ccCCCCccccc----cc-ccCCCCCCCCCCCCCCCCCCCCCccCCCCcCCCCCC-CCCccccCCCCccCCCCCccc
Q psy14262 346 RCGSSNQCVAL----SK-FCDGKPDCSNGEDEGPFCNNKADCENLKCSHKCSPT-PRGAMCFCPAGQNPNKTQCVD 415 (482)
Q Consensus 346 ~C~~g~~Ci~~----~~-~CDg~~dC~dgsDE~~~C~~~~~C~~~~C~~~C~~~-~~~~~C~C~~G~~~~~~~C~d 415 (482)
+|.||+.|+.. .+ +| .|+.|+.+.. |.+. . .. .|... ...|++.+..++ .++.|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C----~Cp~g~~G~~-Ce~~-~--~~----~C~~g~G~~YrG~~~~t~--sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWC----NCPKKFGGQH-CEID-K--SK----TCYEGNGHFYRGKASTDT--MGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEE----ECCTTEESTT-SCEE-S--SC----CSBCSSCTTCCSCCCBBT--TSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCc----cCCCCCCCcc-cccc-C--cC----CCcccccccceeeccccc--cCCcccC
Confidence 57888788764 23 77 8888887766 7643 1 11 23322 236778777776 6666764
No 170
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=28.32 E-value=45 Score=32.57 Aligned_cols=33 Identities=42% Similarity=0.906 Sum_probs=28.1
Q ss_pred CCCCCceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 422 DGSCDQTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 422 ~~~Cs~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
...|.+.|.+..|+|.|.|..||.|..+.+++.
T Consensus 131 ~~~~~~~c~n~~g~~~csC~~g~~l~~~~~~~~ 163 (361)
T 4aqb_A 131 ELSCDHYCHNYIGGYYCSCRFGYILHTDNRTCR 163 (361)
T ss_dssp SSCCSSEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred CCCCCccCCccCCCceeccCCCeEEeccccccc
Confidence 456789999999999999999999987777664
No 171
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=26.73 E-value=46 Score=22.94 Aligned_cols=21 Identities=33% Similarity=0.806 Sum_probs=15.8
Q ss_pred ecCCceEEecCCCeEECCCCCcccc
Q psy14262 431 NTHLSYVCSCTEGYTLRPDGKSCTA 455 (482)
Q Consensus 431 n~~gsy~C~C~~Gy~l~~d~~tC~d 455 (482)
...+.+.|.|++||. |..|+-
T Consensus 25 ~~~~~~~C~C~~gy~----G~RCe~ 45 (50)
T 1iox_A 25 VAEQTPSCVCDEGYI----GARCER 45 (50)
T ss_dssp TTTTEEEECCCTTEE----TTTTCE
T ss_pred cCCCCeEEECCCCcc----cCCCCe
Confidence 345678999999998 667753
No 172
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=24.33 E-value=57 Score=22.56 Aligned_cols=25 Identities=32% Similarity=0.763 Sum_probs=17.2
Q ss_pred eeee--cCCceEEecCCCeEECCCCCccccC
Q psy14262 428 TCTN--THLSYVCSCTEGYTLRPDGKSCTAV 456 (482)
Q Consensus 428 ~C~n--~~gsy~C~C~~Gy~l~~d~~tC~di 456 (482)
.|.- ....+.|.|++||. |..|+-.
T Consensus 20 ~C~~~~~~~~~~C~C~~gy~----G~RCe~~ 46 (50)
T 3e50_C 20 TCRFLVQEDKPACVCHSGYV----GARCEHA 46 (50)
T ss_pred EEeeccCCCCeEEECCCCCc----ccCCCce
Confidence 5543 33568999999997 6667543
No 173
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=24.19 E-value=9.9 Score=32.35 Aligned_cols=24 Identities=33% Similarity=0.959 Sum_probs=19.9
Q ss_pred ceeeecCCceEEecCCCeEECCCCCccc
Q psy14262 427 QTCTNTHLSYVCSCTEGYTLRPDGKSCT 454 (482)
Q Consensus 427 ~~C~n~~gsy~C~C~~Gy~l~~d~~tC~ 454 (482)
..|.+..++|.|.|.+||. +..|+
T Consensus 131 g~C~~~~~~~~c~C~~g~~----g~~Ce 154 (157)
T 1g1t_A 131 GECVETINNYTCKCDPGFS----GLKCE 154 (157)
T ss_dssp EEEEEETTEEEEEECTTEE----STTSC
T ss_pred CEeecCCCCeeEECCCCcc----Ccccc
Confidence 5788889999999999998 66675
No 174
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=23.95 E-value=21 Score=27.49 Aligned_cols=10 Identities=30% Similarity=0.916 Sum_probs=4.9
Q ss_pred CccccCCCCc
Q psy14262 397 GAMCFCPAGQ 406 (482)
Q Consensus 397 ~~~C~C~~G~ 406 (482)
.+.|.|++||
T Consensus 61 ~~~C~C~~GY 70 (79)
T 1xdt_R 61 APSCICHPGY 70 (79)
T ss_dssp BCCEEECTTE
T ss_pred CeEEEcCCCc
Confidence 3445555555
No 175
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=22.65 E-value=42 Score=28.21 Aligned_cols=31 Identities=32% Similarity=0.751 Sum_probs=23.8
Q ss_pred CccCCCCcC--CCCCCCCCccccCCCCccCCCCCc
Q psy14262 381 DCENLKCSH--KCSPTPRGAMCFCPAGQNPNKTQC 413 (482)
Q Consensus 381 ~C~~~~C~~--~C~~~~~~~~C~C~~G~~~~~~~C 413 (482)
+|.+.+|++ .|.+....|.|.|.+|| .+..|
T Consensus 121 ~~~~~pc~~~g~C~~~~~~~~c~C~~g~--~g~~C 153 (157)
T 1g1t_A 121 ACTNTSCSGHGECVETINNYTCKCDPGF--SGLKC 153 (157)
T ss_dssp CCCTTGGGGSEEEEEETTEEEEEECTTE--ESTTS
T ss_pred CCCCCCCCCCCEeecCCCCeeEECCCCc--cCccc
Confidence 455566765 88888889999999999 66655
No 176
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=20.29 E-value=88 Score=21.55 Aligned_cols=18 Identities=22% Similarity=0.685 Sum_probs=13.4
Q ss_pred eee--ecCCceEEecCCCeE
Q psy14262 428 TCT--NTHLSYVCSCTEGYT 445 (482)
Q Consensus 428 ~C~--n~~gsy~C~C~~Gy~ 445 (482)
.|. ...+.+.|.|+.||.
T Consensus 24 ~C~~i~~~~~~~C~C~~gy~ 43 (50)
T 2rnl_A 24 ECKYIEHLEAVTCKCQQEYF 43 (50)
T ss_dssp EEEEETTTTEEEEECCSSCC
T ss_pred EEEEecCCCCeeEECCCCcc
Confidence 565 345578899999997
Done!