RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14265
(489 letters)
>d1po5a_ a.104.1.1 (A:) Mammalian cytochrome p450 2b4 {Rabbit
(Oryctolagus cuniculus) [TaxId: 9986]}
Length = 465
Score = 169 bits (427), Expect = 1e-47
Identities = 61/337 (18%), Positives = 116/337 (34%), Gaps = 6/337 (1%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
+E + L K +D +++I S VFG + +
Sbjct: 111 GKRSVEERIQEEARCLVEELRKSKGALLDNTLLFHSITSNIICSIVFGKRFDYKDPVFLR 170
Query: 61 FRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMM-LLRKAAYFFLDVVHQNVSYRE 119
+ + F+ ++ Q+ + + + L++ F V ++ + +
Sbjct: 171 LLDLFFQSFSLISSFSSQVFELFSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLD 230
Query: 120 QNNIKRND---FINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKN 176
+N + + + + + + + FFAG +T+ST L + + K
Sbjct: 231 PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKY 290
Query: 177 KSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQL 236
+ +++ EI + + +MP D VI E R+ +
Sbjct: 291 PHVTERVQKEI-EQVIGSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQ 349
Query: 237 PNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRN 296
V+ K T++F L HDP + P+ F+P F N N ++PF G R
Sbjct: 350 FR-GYVIPKNTEVFPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNEGFMPFSLGKRI 408
Query: 297 CIGKRFALLQLKSGLAHSLSNFEWDSDHTNEMFPLME 333
C+G+ A +L L NF S E L
Sbjct: 409 CLGEGIARTELFLFFTTILQNFSIASPVPPEDIDLTP 445
>d1tqna_ a.104.1.1 (A:) Mammalian cytochrome P450 3a4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 472
Score = 167 bits (422), Expect = 6e-47
Identities = 102/326 (31%), Positives = 166/326 (50%), Gaps = 11/326 (3%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
M P++ G L L + + + +K+ G Y DVI ST FG+ I+SL NP
Sbjct: 118 MVPIIAQYGDVLVRNLR--REAETGKPVTLKDVFGAYSMDVITSTSFGVNIDSLNNPQDP 175
Query: 61 FRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQ 120
F +K++ + + + + + + + ++ + R+ F V + R +
Sbjct: 176 FVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 235
Query: 121 NNIKRNDFINIMMELKKTDPD------ITEELITAQCFLFFFAGFDTSSTVLTFSLYELA 174
+ K +M + + +++ + AQ +F FAG++T+S+VL+F +YELA
Sbjct: 236 DTQKHRVDFLQLMIDSQNSKETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELA 295
Query: 175 KNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPY 234
+ +Q KL+ EI+ TY++ +M LD V+ E+LR++ +LERV +
Sbjct: 296 THPDVQQKLQEEIDAV-LPNKAPPTYDTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDV 354
Query: 235 QLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGP 294
++ I KG + IP Y LH DP+ + P+ F PERF+ +N DNI Y Y PFG GP
Sbjct: 355 EINGMFI--PKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNKDNIDPYIYTPFGSGP 412
Query: 295 RNCIGKRFALLQLKSGLAHSLSNFEW 320
RNCIG RFAL+ +K L L NF +
Sbjct: 413 RNCIGMRFALMNMKLALIRVLQNFSF 438
>d3czha1 a.104.1.1 (A:40-502) Vitamin D 25-hydroxylase Cyp2R1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 463
Score = 157 bits (396), Expect = 2e-43
Identities = 53/324 (16%), Positives = 115/324 (35%), Gaps = 6/324 (1%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
E+ K + D K+ + ++++ +FG +
Sbjct: 111 GQKSFESKILEETKFFNDAIETYKGRPFDFKQLITNAVSNITNLIIFGERFTYEDTDFQH 170
Query: 61 FRRISKEMFTENNNMRLQIILALILL----IPYLRKFMSYMMLLRKAAYFFLDVVHQNVS 116
+ E + + + A + ++ ++ ++ N
Sbjct: 171 MIELFSENVELAASASVFLYNAFPWIGILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRK 230
Query: 117 YREQNNIKRNDFINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKN 176
+ + + ++E + AG +T++ VL +++ +A
Sbjct: 231 PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALY 290
Query: 177 KSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQL 236
+IQ +++ EI D G+ +++ +MP + V+ E LR + A +
Sbjct: 291 PNIQGQVQKEI-DLIMGPNGKPSWDDKCKMPYTEAVLHEVLRFCNIVPLGIFHATSEDAV 349
Query: 237 PNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRN 296
+ KGT + LY +H D + + +P+VF PERF + A +PF G R+
Sbjct: 350 VR-GYSIPKGTTVITNLYSVHFDEKYWRDPEVFHPERFLDSSGYFAKKEALVPFSLGRRH 408
Query: 297 CIGKRFALLQLKSGLAHSLSNFEW 320
C+G+ A +++ L F
Sbjct: 409 CLGEHLARMEMFLFFTALLQRFHL 432
>d1r9oa_ a.104.1.1 (A:) Mammalian cytochrome p450 2c9 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 467
Score = 132 bits (331), Expect = 3e-34
Identities = 67/340 (19%), Positives = 121/340 (35%), Gaps = 6/340 (1%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
+E + L K D LG +VI S +F + +
Sbjct: 112 GKRSIEDRVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFHKRFDYKDQQFLN 171
Query: 61 FRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQ 120
E ++ +QI +I Y + ++ ++ +
Sbjct: 172 LMEKLNENIKILSSPWIQICNNFSPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD 231
Query: 121 NNIKRND----FINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKN 176
N ++ + + E + T E + F AG +T+ST L ++L L K+
Sbjct: 232 MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTAVDLFGAGTETTSTTLRYALLLLLKH 291
Query: 177 KSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQL 236
+ +K++ EI + + + MP D V+ E R L +
Sbjct: 292 PEVTAKVQEEIERVIGR-NRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTSLPH-AVTCDI 349
Query: 237 PNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRN 296
+ ++ KGT + I L + HD + +PNP++FDP F E + + ++PF G R
Sbjct: 350 KFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHFLDEGGNFKKSKYFMPFSAGKRI 409
Query: 297 CIGKRFALLQLKSGLAHSLSNFEWDSDHTNEMFPLMETCG 336
C+G+ A ++L L L NF S +
Sbjct: 410 CVGEALAGMELFLFLTSILQNFNLKSLVDPKNLDTTPVVN 449
>d2ij2a1 a.104.1.1 (A:3-455) Cytochrome P450 bm-3 {Bacillus
megaterium [TaxId: 1404]}
Length = 453
Score = 126 bits (317), Expect = 2e-32
Identities = 76/331 (22%), Positives = 136/331 (41%), Gaps = 14/331 (4%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
M ++ + + I+V E + R D IG F NS
Sbjct: 110 MKGYHAMMVDIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPH 169
Query: 61 FRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQ 120
S + +LQ P + ++ D+V + ++ R+
Sbjct: 170 PFITSMVRALDEAMNKLQ------RANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKA 223
Query: 121 NNIKRNDFINIMMELKKTDPD--ITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKNKS 178
+ + +D + M+ K + + +E I Q F AG +T+S +L+F+LY L KN
Sbjct: 224 SGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPH 283
Query: 179 IQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQLPN 238
+ K E + +Y+ ++ + V+ E+LR++ A L
Sbjct: 284 VLQKAAEEAA--RVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGG 341
Query: 239 TDIVVDKGTKMFIPLYGLHHDPEIY-PNPDVFDPERFAPENADNIPNYAYLPFGEGPRNC 297
+ ++KG ++ + + LH D I+ + + F PERF EN IP +A+ PFG G R C
Sbjct: 342 -EYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF--ENPSAIPQHAFKPFGNGQRAC 398
Query: 298 IGKRFALLQLKSGLAHSLSNFEWDSDHTNEM 328
IG++FAL + L L +F+++ E+
Sbjct: 399 IGQQFALHEATLVLGMMLKHFDFEDHTNYEL 429
>d1izoa_ a.104.1.1 (A:) Cytochrome p450 152a1 (Bs-beta) {Bacillus
subtilis [TaxId: 1423]}
Length = 411
Score = 95.1 bits (235), Expect = 9e-22
Identities = 46/337 (13%), Positives = 97/337 (28%), Gaps = 52/337 (15%)
Query: 1 MFPLMETCGRNLETILTTLDYNKKHQSIDVKEYLGRYMTDVIGSTVFGLEINSLENPDCE 60
+ LM + + +K + + E + V + E
Sbjct: 106 LAELMTEEWKAA------VTRWEKADEVVLFEEAKEILCRVACYWAGV------PLKETE 153
Query: 61 FRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQ 120
+ + + + + +A + ++ + +
Sbjct: 154 VKERADDFID-----------MVDAFGAVGPRHWKGRRARPRAEEWIEVMIEDARAGLLK 202
Query: 121 NNIKRNDFINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKNKSIQ 180
++ M + D + + A + S L FS L ++ +
Sbjct: 203 T--TSGTALHEMAFHTQEDGSQLDSRMAAIELINVLRPIVAISYFLVFSALALHEHPKYK 260
Query: 181 SKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQLPNTD 240
+ + ++E R Y L + +
Sbjct: 261 ------------------EWLRSGNSREREMFVQEVRRYYPFGPFLGAL--VKKDFVWNN 300
Query: 241 IVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEG----PRN 296
KGT + + LYG +HDP ++ +PD F PERFA + + +P G G
Sbjct: 301 CEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERFAEREENL---FDMIPQGGGHAEKGHR 357
Query: 297 CIGKRFALLQLKSGLAHSLSNFEWDSDHTNEMFPLME 333
C G+ + +K+ L + E+D + + L
Sbjct: 358 CPGEGITIEVMKASLDFLVHQIEYDVPEQSLHYSLAR 394
>d1z8oa1 a.104.1.1 (A:3-404) Cytochrome P450-ERYF {Saccharopolyspora
erythraea [TaxId: 1836]}
Length = 402
Score = 93.0 bits (229), Expect = 4e-21
Identities = 39/232 (16%), Positives = 81/232 (34%), Gaps = 33/232 (14%)
Query: 90 LRKFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMEL-KKTDPDITEELIT 148
L +AA ++ + V R +D ++ ++ + D ++ + +T
Sbjct: 173 LVMDPERAEQRGQAAREVVNFILDLVERRRTE--PGDDLLSALIRVQDDDDGRLSADELT 230
Query: 149 AQCFLFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPL 208
+ + AGF+ S +++ Y L + + + +
Sbjct: 231 SIALVLLLAGFEASVSLIGIGTYLLLTHPDQLALV-------------------RRDPSA 271
Query: 209 LDKVIKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDV 268
L ++E LR P R A ++ I + + + + + DP+ +P+P
Sbjct: 272 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAI--PQYSTVLVANGAANRDPKQFPDPHR 329
Query: 269 FDPERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
FD R +L FG+G C+G+ A L+ + L F
Sbjct: 330 FDVTRD---------TRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFPA 372
>d1cpta_ a.104.1.1 (A:) Cytochrome P450-TERP {Pseudomonas sp.
[TaxId: 306]}
Length = 428
Score = 92.9 bits (229), Expect = 5e-21
Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 39/266 (14%)
Query: 55 ENPDCEFRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQN 114
E+ + +++++ F + + R+F + F D +
Sbjct: 174 EDDEPLMLKLTQDFFGVHEPDEQAVAAPRQSADEAARRF-------HETIATFYDYFNGF 226
Query: 115 VSYREQNNIKRNDFINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELA 174
R + +L D AG DT+S+ ++ L+
Sbjct: 227 TVDRRSCPKDDVMSLLANSKLDGNYIDDKYINAY--YVAIATAGHDTTSSSSGGAIIGLS 284
Query: 175 KNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPY 234
+N E + ++ L+ +++ E++R P+ R A
Sbjct: 285 RNP-------------------EQLALAKSDPALIPRLVDEAVRWTAPVKSFMRTALADT 325
Query: 235 QLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGP 294
++ +I +G ++ + + D E++ NPD FD RF +L FG G
Sbjct: 326 EVRGQNIK--RGDRIMLSYPSANRDEEVFSNPDEFDITRF---------PNRHLGFGWGA 374
Query: 295 RNCIGKRFALLQLKSGLAHSLSNFEW 320
C+G+ A L++K L +
Sbjct: 375 HMCLGQHLAKLEMKIFFEELLPKLKS 400
>d1jfba_ a.104.1.1 (A:) Cytochrome P450-NOR, nitric reductase
{Fungus (Fusarium oxysporum) [TaxId: 5507]}
Length = 399
Score = 89.9 bits (221), Expect = 5e-20
Identities = 37/233 (15%), Positives = 68/233 (29%), Gaps = 29/233 (12%)
Query: 88 PYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELI 147
S A LD + V R ++D I+ + + +I +
Sbjct: 168 AIRTNGSSTAREASAANQELLDYLAILVEQRLVEP--KDDIISKLCTEQVKPGNIDKSDA 225
Query: 148 TAQCFLFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMP 207
FL AG T ++ + LA++ ++L+ + Y + +
Sbjct: 226 VQIAFLLLVAGNATMVNMIALGVATLAQHPDQLAQLKANPSLAPQFVEELCRYHTAS--- 282
Query: 208 LLDKVIKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPD 267
+ + E V + + + D E++ NPD
Sbjct: 283 ----------ALAIKRTAKEDVMIGDKLVRAN-------EGIIASNQSANRDEEVFENPD 325
Query: 268 VFDPERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
F+ R P L FG G CI + A +L + + F
Sbjct: 326 EFNMNRKWPPQD-------PLGFGFGDHRCIAEHLAKAELTTVFSTLYQKFPD 371
>d2ciba1 a.104.1.1 (A:5-449) Cytochrome p450 14 alpha-sterol
demethylase (cyp51) {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 445
Score = 89.9 bits (221), Expect = 5e-20
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 249 MFIPLYGLHHDPEIYPNPDVFDPERF-APENADNIPNYAYLPFGEGPRNCIGKRFALLQL 307
+ + PE +P+P F P R+ P D + + ++PFG G C+G FA++Q+
Sbjct: 341 VAASPAISNRIPEDFPDPHDFVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQI 400
Query: 308 KSGLAHSLSNFEWDSDHTNEMFP 330
K+ + L +E++ E +
Sbjct: 401 KAIFSVLLREYEFEMAQPPESYR 423
>d1odoa_ a.104.1.1 (A:) Cyp154a1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 401
Score = 87.9 bits (216), Expect = 2e-19
Identities = 32/230 (13%), Positives = 64/230 (27%), Gaps = 28/230 (12%)
Query: 91 RKFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELITAQ 150
+ A + + + R + + + ++ E +
Sbjct: 170 DTTLDQAEAQANTARLYEVLDQLIAAKRATPGDDMTSLLIAARDDEGDGDRLSPEELRDT 229
Query: 151 CFLFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLD 210
L AG++T+ V+ +++ L E+ D
Sbjct: 230 LLLMISAGYETTVNVIDQAVHTLLTRPDQL------------------ALVRKGEVTWAD 271
Query: 211 KVIKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFD 270
V + R A LP+ + +G + + P+ + + D FD
Sbjct: 272 VVEETLRHEPAVKHLPLRYAVTDIALPDG-RTIARGEPILASYAAANRHPDWHEDADTFD 330
Query: 271 PERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
R E +L FG G C+G A +++ L F
Sbjct: 331 ATRTVKE---------HLAFGHGVHFCLGAPLARMEVTLALESLFGRFPD 371
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 86.8 bits (213), Expect = 5e-19
Identities = 37/262 (14%), Positives = 81/262 (30%), Gaps = 35/262 (13%)
Query: 59 CEFRRISKEMFTENNNMRLQIILALILLIPYLRKFMSYMMLLRKAAYFFLDVVHQNVSYR 118
+ E F + + + ++ + A + +
Sbjct: 147 LKVPAECDEKFRRFGSATARALGVGLVPRVDEETKTLVASVTEGLALLHGVLDER----- 201
Query: 119 EQNNIKRNDFINIMMELKKTDPDITEELITAQCFLFFFAGFDTSSTVLTFSLYELAKNKS 178
+ N ND + ++++ + ++ + + A AG DT+ ++ F++ L ++
Sbjct: 202 -RRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAVLNLLRSPE 260
Query: 179 IQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVIKESLRMYTPLSQLERVAGRPYQLPN 238
P L + + + + + ++ V L
Sbjct: 261 ALEL--------------------VKAEPGLMRNALDEVLRFDNILRIGTVRFARQDLEY 300
Query: 239 TDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRNCI 298
+ KG +F+ + D ++ PDVFD R A L +G GP C
Sbjct: 301 CGASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRD---------TSASLAYGRGPHVCP 351
Query: 299 GKRFALLQLKSGLAHSLSNFEW 320
G A L+ + + F
Sbjct: 352 GVSLARLEAEIAVGTIFRRFPE 373
>d1ueda_ a.104.1.1 (A:) p450 monoxygenase OxyC {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 403
Score = 83.7 bits (205), Expect = 5e-18
Identities = 30/226 (13%), Positives = 64/226 (28%), Gaps = 29/226 (12%)
Query: 94 MSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELITAQCFL 153
+ + KA ++ + D + M ++ ++T+E + C
Sbjct: 179 NADLSRGLKARAADSAAFNRYLDNLLARQRADPDDGLLGMIVRDHGDNVTDEELKGLCTA 238
Query: 154 FFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKVI 213
G +T + ++ F + L N + V
Sbjct: 239 LILGGVETVAGMIGFGVLALLDNPGQI------------------ELLFESPEKAERVVN 280
Query: 214 KESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPER 273
+ + + R+ + ++ G + + + D + P+PDV D R
Sbjct: 281 ELVRYLSPVQAPNPRL--AIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPDVLDANR 338
Query: 274 FAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFE 319
+ + FG G C+G A L+ F
Sbjct: 339 A---------AVSDVGFGHGIHYCVGAALARSMLRMAYQTLWRRFP 375
>d1s1fa_ a.104.1.1 (A:) Cyp158a2 {Streptomyces coelicolor [TaxId:
1902]}
Length = 399
Score = 81.8 bits (200), Expect = 2e-17
Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 233 PYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGE 292
+ + + G +++ + DPE++P+PD D ER ++ FG
Sbjct: 291 LEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERS---------PNPHVSFGF 341
Query: 293 GPRNCIGKRFALLQLKSGLAHSLSNFEW 320
GP C G A L+ + + L
Sbjct: 342 GPHYCPGGMLARLESELLVDAVLDRVPG 369
>d1gwia_ a.104.1.1 (A:) Cyp154c1 monooxygenase {Streptomyces
coelicolor [TaxId: 1902]}
Length = 403
Score = 80.6 bits (197), Expect = 5e-17
Identities = 28/229 (12%), Positives = 72/229 (31%), Gaps = 31/229 (13%)
Query: 93 FMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELITAQCF 152
+ + ++ V + +D + +++ + +T+ I +
Sbjct: 173 TQTPPEEVVATLTELASIMTDTV--AAKRAAPGDDLTSALIQASENGDHLTDAEIVSTLQ 230
Query: 153 LFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKV 212
L AG +T+ +++ ++ L+ + ++ + + + A L + + L+
Sbjct: 231 LMVAAGHETTISLIVNAVVNLSTHPEQRALVLSGEAEWSAVVEETLRFSTPTSHVLIRFA 290
Query: 213 IKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIY-PNPDVFDP 271
++ + G + + L D + P D FD
Sbjct: 291 AEDVPVGDRV--------------------IPAGDALIVSYGALGRDERAHGPTADRFDL 330
Query: 272 ERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
R + ++ FG GP C G + ++ L + F
Sbjct: 331 TRTSG--------NRHISFGHGPHVCPGAALSRMEAGVALPALYARFPH 371
>d1lfka_ a.104.1.1 (A:) p450 monoxygenase OxyB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 394
Score = 80.2 bits (196), Expect = 7e-17
Identities = 18/80 (22%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 240 DIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRNCIG 299
+ KG + L + DP + P+ D D R ++ FG G +C+G
Sbjct: 295 GQEIKKGDSVICSLPAANRDPALAPDVDRLDVTR---------EPIPHVAFGHGVHHCLG 345
Query: 300 KRFALLQLKSGLAHSLSNFE 319
A L+L++ F
Sbjct: 346 AALARLELRTVFTELWRRFP 365
>d1re9a_ a.104.1.1 (A:) Cytochrome P450-CAM {Pseudomonas putida
[TaxId: 303]}
Length = 404
Score = 79.4 bits (194), Expect = 1e-16
Identities = 41/228 (17%), Positives = 65/228 (28%), Gaps = 33/228 (14%)
Query: 93 FMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELITAQCF 152
M +A D + + R Q D I+I+ + IT + C
Sbjct: 176 RPDGSMTFAEAKEALYDYLIPIIEQRRQKP--GTDAISIVANGQVNGRPITSDEAKRMCG 233
Query: 153 LFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDKV 212
L G DT L+FS+ LAK+ + +L A L S +
Sbjct: 234 LLLVGGLDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTS 293
Query: 213 IKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDPE 272
E + KG ++ +P D P D
Sbjct: 294 DYEFHGVQLK----------------------KGDQILLPQMLSGLDERENACPMHVDFS 331
Query: 273 RFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
R ++ FG G C+G+ A ++ L L+
Sbjct: 332 R---------QKVSHTTFGHGSHLCLGQHLARREIIVTLKEWLTRIPD 370
>d1n97a_ a.104.1.1 (A:) Cyp175a1 {Thermus thermophilus [TaxId: 274]}
Length = 385
Score = 77.5 bits (189), Expect = 4e-16
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 257 HHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLS 316
+P+ + F PERF E P+ Y PFG G R C+G+ FALL+ L
Sbjct: 298 VTQRLHFPDGEAFRPERFLEERGT--PSGRYFPFGLGQRLCLGRDFALLEGPIVLRAFFR 355
Query: 317 NFEWD 321
F D
Sbjct: 356 RFRLD 360
>d1n40a_ a.104.1.1 (A:) Cyp121 monooxygenase (P450 Mt2)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 395
Score = 74.0 bits (180), Expect = 6e-15
Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 8/63 (12%)
Query: 257 HHDPEIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLS 316
+ DPE +PNP + +R P ++L FG G C G + G+ L
Sbjct: 312 NFDPEHFPNPGSIELDRPNP--------TSHLAFGRGQHFCPGSALGRRHAQIGIEALLK 363
Query: 317 NFE 319
Sbjct: 364 KMP 366
>d1ue8a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus tokodaii [TaxId:
111955]}
Length = 367
Score = 73.7 bits (179), Expect = 8e-15
Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 37/233 (15%)
Query: 88 PYLRKFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELI 147
+ + + +L+++ + + K + + + +++E
Sbjct: 145 DLVALRLGRADEIFSIGRKYLELISFSKKELDSRKGKEIVDLTGKIA----NSNLSELEK 200
Query: 148 TAQCFLFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMP 207
L AG +T++ ++ ++ + Y
Sbjct: 201 EGYFILLMIAGNETTTNLIGNAIEDFTLYN----------------------SWDYVREK 238
Query: 208 LLDKVIKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPD 267
K ++E+LR P+ + RV ++ + I D+G + + + + D E++ +PD
Sbjct: 239 GALKAVEEALRFSPPVMRTIRVTKEKVKIRDQVI--DEGELVRVWIASANRDEEVFKDPD 296
Query: 268 VFDPERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
F P+R +L FG G C+G A L+ + L F
Sbjct: 297 SFIPDRT---------PNPHLSFGSGIHLCLGAPLARLEARIALEEFAKKFRV 340
>d1io7a_ a.104.1.1 (A:) Cyp119 {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 366
Score = 70.6 bits (171), Expect = 7e-14
Identities = 28/229 (12%), Positives = 70/229 (30%), Gaps = 33/229 (14%)
Query: 92 KFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPDITEELITAQC 151
K S ++ R + + + + ++ + + ++++
Sbjct: 145 KEWSDLVAFRLGKPGEIFELGKKYLELIGYVKDHLNSGTEVVS-RVVNSNLSDIEKLGYI 203
Query: 152 FLFFFAGFDTSSTVLTFSLYELAKNKSIQSKLRNEINDTKAKYGGELTYESYNEMPLLDK 211
L AG +T++ +++ S+ + + L
Sbjct: 204 ILLLIAGNETTTNLISNSVIDFTRFN----------------------LWQRIREENLYL 241
Query: 212 VIKESLRMYTPLSQLERVAGRPYQLPNTDIVVDKGTKMFIPLYGLHHDPEIYPNPDVFDP 271
E Y+P + D +++G + + + + D E++ + + F P
Sbjct: 242 KAIEEALRYSPPVMRTVRKTKERV-KLGDQTIEEGEYVRVWIASANRDEEVFHDGEKFIP 300
Query: 272 ERFAPENADNIPNYAYLPFGEGPRNCIGKRFALLQLKSGLAHSLSNFEW 320
+R +L FG G C+G A L+ + + F
Sbjct: 301 DRN---------PNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRFRH 340
>d1ojxa_ c.1.10.1 (A:) Archaeal fructose 1,6-bisphosphate aldolase
{Archaeon Thermoproteus tenax [TaxId: 2271]}
Length = 251
Score = 27.7 bits (61), Expect = 3.3
Identities = 19/84 (22%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 241 IVVDKGTKMFIPL-YGLHHDP-EIYPNPDVFDPERFAPENADNIPNYAYLPFGEGPRNCI 298
I +G + + +G+ H P + NPD DPE D + G
Sbjct: 9 IFARRGKSIILAYDHGIEHGPADFMDNPDSADPEYILRLARDAGFDGVVFQRGI-AEKYY 67
Query: 299 GKRFALLQLKSGLAHSLSNFEWDS 322
L+ +G +L N E S
Sbjct: 68 DGSVPLILKLNG-KTTLYNGEPVS 90
>d2guma1 e.76.1.1 (A:111-725) Glycoprotein B {Human herpesvirus 1
[TaxId: 10298]}
Length = 615
Score = 27.4 bits (61), Expect = 4.7
Identities = 10/52 (19%), Positives = 16/52 (30%), Gaps = 6/52 (11%)
Query: 157 AGFDTSSTVLTFSLYELAK------NKSIQSKLRNEINDTKAKYGGELTYES 202
F T+ T S +L ++ N T K G Y++
Sbjct: 283 TTFTTNLTEYPLSRVDLGDCIGKDARDAMDRIFARRYNATHIKVGQPQYYQA 334
>d1o22a_ d.238.1.1 (A:) Hypothetical protein TM0875 {Thermotoga
maritima [TaxId: 2336]}
Length = 149
Score = 25.4 bits (55), Expect = 9.9
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 11/113 (9%)
Query: 367 DVIGSTVFG---LEINSLENPDCEFRRISKEMFTENNNMRL------QIILALILLIPYL 417
+ + S + G L+I+ LE + K + + N + L + + I YL
Sbjct: 32 EPVNSELIGRIFLKISVLEEGEEVPSFAIKALTPKENAVDLPLGDWTDLKNVFVEEIDYL 91
Query: 418 RKFMSYMMLLRKAAYFFLDVVHQNVSYREQNNIKRNDFINIMMELKKTDPGNY 470
+ M +L + ++ + V + +V + +N + +F+ E K +PG Y
Sbjct: 92 DSY-GDMKILSEKNWYKIYVPYSSVKKKNRNELVE-EFMKYFFESKGWNPGEY 142
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.139 0.403
Gapped
Lambda K H
0.267 0.0393 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,857,043
Number of extensions: 90179
Number of successful extensions: 255
Number of sequences better than 10.0: 1
Number of HSP's gapped: 234
Number of HSP's successfully gapped: 34
Length of query: 489
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 400
Effective length of database: 1,185,626
Effective search space: 474250400
Effective search space used: 474250400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.9 bits)