RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy14266
(560 letters)
>gnl|CDD|215689 pfam00067, p450, Cytochrome P450. Cytochrome P450s are
haem-thiolate proteins involved in the oxidative
degradation of various compounds. They are particularly
well known for their role in the degradation of
environmental toxins and mutagens. They can be divided
into 4 classes, according to the method by which
electrons from NAD(P)H are delivered to the catalytic
site. Sequence conservation is relatively low within the
family - there are only 3 absolutely conserved residues
- but their general topography and structural fold are
highly conserved. The conserved core is composed of a
coil termed the 'meander', a four-helix bundle, helices
J and K, and two sets of beta-sheets. These constitute
the haem-binding loop (with an absolutely conserved
cysteine that serves as the 5th ligand for the haem
iron), the proton-transfer groove and the absolutely
conserved EXXR motif in helix K. While prokaryotic P450s
are soluble proteins, most eukaryotic P450s are
associated with microsomal membranes. their general
enzymatic function is to catalyze regiospecific and
stereospecific oxidation of non-activated hydrocarbons
at physiological temperatures.
Length = 461
Score = 158 bits (402), Expect = 9e-43
Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 18/287 (6%)
Query: 62 PVLVLADSEIIKHVLIKDFDVFTDRG--FFEANETDEPIMRNLFGLTGDEWRKMRNKMSP 119
PV+VL+ E +K VLIK + F+ R + A + + + G WR++R ++P
Sbjct: 45 PVVVLSGPEAVKEVLIKKGEEFSGRPDEPWFATSRGPFLGKGIVFANGPRWRQLRRFLTP 104
Query: 120 TFTSGKIKEMFPLMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEIN 179
TFTS P +E R++V L K + ID+ + L R ++I S +FG
Sbjct: 105 TFTSFGKLSFEPRVEEEARDLVEKLRKTAGE-PGVIDITDLLFRAALNVICSILFGERFG 163
Query: 180 ALENP-DCEFRKVSKEMLNPKLRFRIVMILVLLIPNIRKFLSGLMMDRKNV-----QFFL 233
+LE+P E K +E+ L L+ L P ++ F K
Sbjct: 164 SLEDPKFLELVKAVQELS--SLLSSPSPQLLDLFPILKYFPGPHGRKLKRARKKIKDLLD 221
Query: 234 DLVHQNLSYREQNNIKRNDFINIMMELRKNDP--DITEELITAQCFLFFIAGFDTSSTVL 291
L+ + + DF++ ++ ++ + +T+E + A F AG DT+S+ L
Sbjct: 222 KLIEERRETLDSAKKSPRDFLDALLLAKEEEDGSKLTDEELRATVLELFFAGTDTTSSTL 281
Query: 292 TFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESL----ILDWII 334
+++LYELAK+ +Q LR+EI D TY+ L LD +I
Sbjct: 282 SWALYELAKHPEVQEKLREEI-DEVIGDKRSPTYDDLQNMPYLDAVI 327
Score = 115 bits (290), Expect = 1e-27
Identities = 49/125 (39%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 435 DITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTY 494
+T+E + A F AG DT+S+ L+++LYELAK+ +Q LR+EI D TY
Sbjct: 256 KLTDEELRATVLELFFAGTDTTSSTLSWALYELAKHPEVQEKLREEI-DEVIGDKRSPTY 314
Query: 495 ESYDEMPLLDRVIKESLRMYTPLG-QLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHD 553
+ MP LD VIKE+LR++ + L R + +P +I KGT + + LY LH D
Sbjct: 315 DDLQNMPYLDAVIKETLRLHPVVPLLLPREVTKDTVIP--GYLIPKGTLVIVNLYALHRD 372
Query: 554 PEIYP 558
PE++P
Sbjct: 373 PEVFP 377
Score = 32.3 bits (74), Expect = 0.81
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 5/57 (8%)
Query: 394 KFGLKSPFAGIFTTTTPVLVLADSEIIKHVLIKDFDVFTDRDITEELITAQCFVFFI 450
K+G P ++ PV+VL+ E +K VLIK + F+ R E A F+
Sbjct: 32 KYG---PIFRLYLGPKPVVVLSGPEAVKEVLIKKGEEFSGRPD--EPWFATSRGPFL 83
>gnl|CDD|225035 COG2124, CypX, Cytochrome P450 [Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 411
Score = 82.9 bits (205), Expect = 6e-17
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 436 ITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYE 495
++++ I + +AG +T++ L ++LY L ++ + LR E
Sbjct: 232 LSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRAEP-------------- 277
Query: 496 SYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHDPE 555
+ PLL+ V++E+LR+Y P+ R+ +L I GT + + + + DPE
Sbjct: 278 ---DRPLLEAVVEETLRLYPPVPLARRVATEDVEL--GGYRIPAGTVVLLSIGAANRDPE 332
Query: 556 IYP 558
++P
Sbjct: 333 VFP 335
Score = 78.6 bits (194), Expect = 1e-15
Identities = 36/243 (14%), Positives = 91/243 (37%), Gaps = 35/243 (14%)
Query: 81 DVFTDRGFF-------EANETDEPIMR--NLFGLTGDEWRKMRNKMSPTFTSGKIKEMFP 131
+V D FF P++ +L L G E ++R ++P FT ++ P
Sbjct: 61 EVLRDPRFFSSALGAGLRPRLLRPVLGDGSLLTLDGPEHTRLRKLLAPAFTPRALRGYRP 120
Query: 132 LMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEINALENPDCEFRKV 191
L+ ++ L + + V ++ +I + + G+ + + +
Sbjct: 121 LIREIADRLLDDLWQ-----GGADLVLDFAAELTLRVI-AELLGVPLEDRP----QLLR- 169
Query: 192 SKEMLNPKLRFRIVMILVLLIPNIRKFLSGLMMDRKNVQFFLDLVHQNLSYREQNNIKRN 251
+++ L + + R+ + L+ + R R+
Sbjct: 170 --------WSDALLLRLDPDLGPEEPWRRARAARRELDAYLRALIAE----RRAAP--RD 215
Query: 252 DFINIMMELRKNDPD-ITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRK 310
D +++++ + ++++ I + +AG +T++ L ++LY L ++ + LR
Sbjct: 216 DLLSLLLSAEDDGGGRLSDDEIRDELITLLVAGHETTANALAWALYALLRHPDQLAKLRA 275
Query: 311 EIN 313
E +
Sbjct: 276 EPD 278
>gnl|CDD|215164 PLN02290, PLN02290, cytokinin trans-hydroxylase.
Length = 516
Score = 78.7 bits (194), Expect = 2e-15
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 439 ELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYD 498
+LI +C FF AG +T++ +LT++L LA N + Q +R E+ + GGE S D
Sbjct: 315 QLIMDECKTFFFAGHETTALLLTWTLMLLASNPTWQDKVRAEVAEV---CGGETP--SVD 369
Query: 499 EMP---LLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHDPE 555
+ LL+ VI ESLR+Y P L R+ +L D+ I KG ++IP+ +HH E
Sbjct: 370 HLSKLTLLNMVINESLRLYPPATLLPRMAFEDIKL--GDLHIPKGLSIWIPVLAIHHSEE 427
Query: 556 IY 557
++
Sbjct: 428 LW 429
Score = 72.9 bits (179), Expect = 2e-13
Identities = 67/272 (24%), Positives = 121/272 (44%), Gaps = 38/272 (13%)
Query: 62 PVLVLADSEIIKHVLIKDFDVFTDRGFFEANETDEPIMRNLFGLTGDEWRKMRNKMSPTF 121
P L L ++E+IK +L K V T + + + T I R L G +W R+ +P F
Sbjct: 105 PRLCLTETELIKELLTKYNTV-TGKSWLQQQGTKHFIGRGLLMANGADWYHQRHIAAPAF 163
Query: 122 TSGKIKEMFPLMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEINAL 181
++K M C + ++ L K + +++ EY+ R D+I T F
Sbjct: 164 MGDRLKGYAGHMVECTKQMLQSLQKAVESGQTEVEIGEYMTRLTADIISRTEF------- 216
Query: 182 ENPDCEFRKVSKEMLNPKLRFRIVMILV---------LLIPNIRKFLSGLMMDRKNVQFF 232
D + K K F ++ +L L P R F S + K+++
Sbjct: 217 ---DSSYEK-------GKQIFHLLTVLQRLCAQATRHLCFPGSRFFPSKYNREIKSLKGE 266
Query: 233 LD--LVHQNLSYREQNNIKR-----NDFINIM---MELRKNDP-DITEELITAQCFLFFI 281
++ L+ S R+ I R +D + ++ ME ++++ ++ +LI +C FF
Sbjct: 267 VERLLMEIIQSRRDCVEIGRSSSYGDDLLGMLLNEMEKKRSNGFNLNLQLIMDECKTFFF 326
Query: 282 AGFDTSSTVLTFSLYELAKNKSIQSTLRKEIN 313
AG +T++ +LT++L LA N + Q +R E+
Sbjct: 327 AGHETTALLLTWTLMLLASNPTWQDKVRAEVA 358
>gnl|CDD|215086 PLN00168, PLN00168, Cytochrome P450; Provisional.
Length = 519
Score = 64.2 bits (156), Expect = 9e-11
Identities = 38/87 (43%), Positives = 49/87 (56%), Gaps = 6/87 (6%)
Query: 433 DRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGG-- 490
DR +T++ I C F AG DT+ST L + + EL KN SIQS L EI KAK G
Sbjct: 299 DRALTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI---KAKTGDDQ 355
Query: 491 -ELTYESYDEMPLLDRVIKESLRMYTP 516
E++ E +MP L V+ E LR + P
Sbjct: 356 EEVSEEDVHKMPYLKAVVLEGLRKHPP 382
Score = 46.9 bits (111), Expect = 2e-05
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 267 ITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGE 322
+T++ I C F AG DT+ST L + + EL KN SIQS L EI KAK G +
Sbjct: 302 LTDDEIVNLCSEFLNAGTDTTSTALQWIMAELVKNPSIQSKLHDEI---KAKTGDD 354
>gnl|CDD|215354 PLN02655, PLN02655, ent-kaurene oxidase.
Length = 466
Score = 60.5 bits (147), Expect = 9e-10
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 17/138 (12%)
Query: 427 DFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKA 486
DF + +T+E + + I DT+ +++YELAKN Q L +EI +
Sbjct: 249 DFLLSEATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLYREI---RE 305
Query: 487 KYGGE-LTYESYDEMPLLDRVIKESLRMYTPLGQL------DRITGRSYQLPNTDIVIDK 539
G E +T E +P L+ V E+LR Y+P+ L + T Y +P
Sbjct: 306 VCGDERVTEEDLPNLPYLNAVFHETLRKYSPVPLLPPRFVHEDTTLGGYDIP-------A 358
Query: 540 GTKMFIPLYGLHHDPEIY 557
GT++ I +YG + D + +
Sbjct: 359 GTQIAINIYGCNMDKKRW 376
Score = 30.5 bits (69), Expect = 2.9
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 250 RNDFINIMMELRKNDPDITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLR 309
R+ +++ ++ +T+E + + I DT+ +++YELAKN Q L
Sbjct: 244 RDCYLDFLLS---EATHLTDEQLMMLVWEPIIEAADTTLVTTEWAMYELAKNPDKQERLY 300
Query: 310 KEI 312
+EI
Sbjct: 301 REI 303
>gnl|CDD|178524 PLN02936, PLN02936, epsilon-ring hydroxylase.
Length = 489
Score = 59.0 bits (143), Expect = 3e-09
Identities = 34/108 (31%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 450 IAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLDRVIKE 509
+AG +T+ +VLT++LY L+KN ++E++ G TYE E+ L R I E
Sbjct: 288 VAGHETTGSVLTWTLYLLSKNPEALRKAQEELDRVLQ--GRPPTYEDIKELKYLTRCINE 345
Query: 510 SLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHDPEIY 557
S+R+Y L R LP ++ G + I +Y +H PE++
Sbjct: 346 SMRLYPHPPVLIRRAQVEDVLPG-GYKVNAGQDIMISVYNIHRSPEVW 392
Score = 41.7 bits (98), Expect = 8e-04
Identities = 58/279 (20%), Positives = 114/279 (40%), Gaps = 50/279 (17%)
Query: 64 LVLADSEIIKHVLIKDFDVFTDRGFF-EANETDEPIMRNLFGL-----TGDEWRKMRNKM 117
+V++D I KHVL +++ +G E +E LFG G+ W R +
Sbjct: 63 VVVSDPAIAKHVL-RNYGSKYAKGLVAEVSEF-------LFGSGFAIAEGELWTARRRAV 114
Query: 118 SPT----FTSGKIKEMFPLMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTV 173
P+ + S + +F C +V L E+++++ + D+IG +V
Sbjct: 115 VPSLHRRYLSVMVDRVFC---KCAERLVEKLEPVALS-GEAVNMEAKFSQLTLDVIGLSV 170
Query: 174 FGMEINALENPDCEFRKVSKEMLNPKLR------FRIVMILVLLIPNIRKFLSGLMMDRK 227
F ++L + V + + R + V L + P K + + R+
Sbjct: 171 FNYNFDSLTTDSPVIQAVYTALKEAETRSTDLLPYWKVDFLCKISPRQIKAEKAVTVIRE 230
Query: 228 NVQFFLDLVHQ--NLSYREQNNIKRNDFINIMMELRKNDPDITEELITAQ---------- 275
V+ DLV + + E I+ +++N +DP + L+ ++
Sbjct: 231 TVE---DLVDKCKEIVEAEGEVIEGEEYVN------DSDPSVLRFLLASREEVSSVQLRD 281
Query: 276 -CFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEIN 313
+AG +T+ +VLT++LY L+KN ++E++
Sbjct: 282 DLLSMLVAGHETTGSVLTWTLYLLSKNPEALRKAQEELD 320
>gnl|CDD|215393 PLN02738, PLN02738, carotene beta-ring hydroxylase.
Length = 633
Score = 57.2 bits (138), Expect = 1e-08
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 420 IKHVLIKDFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRK 479
I H L+ D + + + ++L+T IAG +TS+ VLT++ Y L+K S+ + L++
Sbjct: 376 ILHFLLASGDDVSSKQLRDDLMT-----MLIAGHETSAAVLTWTFYLLSKEPSVVAKLQE 430
Query: 480 EINDTKAKYGGEL-TYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIV-- 536
E++ G T E ++ RVI ESLR+Y L R RS + D++
Sbjct: 431 EVDSV---LGDRFPTIEDMKKLKYTTRVINESLRLYPQPPVLIR---RSLE---NDMLGG 481
Query: 537 --IDKGTKMFIPLYGLHHDP 554
I +G +FI ++ LH P
Sbjct: 482 YPIKRGEDIFISVWNLHRSP 501
Score = 43.7 bits (103), Expect = 2e-04
Identities = 65/297 (21%), Positives = 117/297 (39%), Gaps = 42/297 (14%)
Query: 64 LVLADSEIIKHVLIKDFDVFTDRGFFEANETDEPIM-RNLFGLTGDEWRKMRNKMSPTFT 122
L+++D I KH+L +D +G E E +M + L G+ WR R + P
Sbjct: 178 LIVSDPSIAKHIL-RDNSKAYSKGILA--EILEFVMGKGLIPADGEIWRVRRRAIVPALH 234
Query: 123 SGKIKEMFPLMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEINALE 182
+ M L + L E ++++ R D+IG VF + ++L
Sbjct: 235 QKYVAAMISLFGQASDRLCQKLDA-AASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLS 293
Query: 183 NP------------DCEFRKVSKEMLNPKLRFRIVMILVLLIPNIRKFLSGLMMDRKNVQ 230
N + E R VS + + I + P RK L + +
Sbjct: 294 NDTGIVEAVYTVLREAEDRSVSP------IPVWEIPIWKDISPRQRKVAEALKLINDTLD 347
Query: 231 FFLDLV-----HQNLSYREQNNIKRNDFINIMMELRKNDPDITEELITAQCFLFFIAGFD 285
+ + + L + E+ +R+ +I+ L + D++ + + IAG +
Sbjct: 348 DLIAICKRMVEEEELQFHEEYMNERDP--SILHFLLASGDDVSSKQLRDDLMTMLIAGHE 405
Query: 286 TSSTVLTFSLYELAKNKSIQSTLRKEINDT------------KAKYGGELTYESLIL 330
TS+ VLT++ Y L+K S+ + L++E++ K KY + ESL L
Sbjct: 406 TSAAVLTWTFYLLSKEPSVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINESLRL 462
>gnl|CDD|215371 PLN02687, PLN02687, flavonoid 3'-monooxygenase.
Length = 517
Score = 54.8 bits (132), Expect = 6e-08
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 16/133 (12%)
Query: 433 DRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGEL 492
IT+ I A F AG DT+S+ + +++ EL ++ I ++E+ D +
Sbjct: 290 GGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHPDILKKAQEEL-DAVVGRDRLV 348
Query: 493 TYESYDEMPLLDRVIKESLRMY--TPLGQLDRITGRS-----YQLPNTDIVIDKGTKMFI 545
+ ++ L VIKE+ R++ TPL L R+ Y +P KG + +
Sbjct: 349 SESDLPQLTYLQAVIKETFRLHPSTPL-SLPRMAAEECEINGYHIP-------KGATLLV 400
Query: 546 PLYGLHHDPEIYP 558
++ + DPE +P
Sbjct: 401 NVWAIARDPEQWP 413
Score = 32.9 bits (75), Expect = 0.54
Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 249 KRNDFINIMMELRKN------DPDITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNK 302
+ D ++ ++ L++ IT+ I A F AG DT+S+ + +++ EL ++
Sbjct: 269 EHKDLLSTLLALKREQQADGEGGRITDTEIKALLLNLFTAGTDTTSSTVEWAIAELIRHP 328
Query: 303 SIQSTLRKEIN 313
I ++E++
Sbjct: 329 DILKKAQEELD 339
>gnl|CDD|177847 PLN02196, PLN02196, abscisic acid 8'-hydroxylase.
Length = 463
Score = 53.0 bits (127), Expect = 2e-07
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 21/143 (14%)
Query: 424 LIKDFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSI-QSTLRKEIN 482
+ D + TD I + +I V F A DT+++VLT+ L LA+N S+ ++ +++
Sbjct: 253 FMGDKEGLTDEQIADNIIG----VIF-AARDTTASVLTWILKYLAENPSVLEAVTEEQMA 307
Query: 483 DTKAKYGGE-LTYESYDEMPLLDRVIKESLRMYTPLG-----QLDRITGRSYQLPNTDIV 536
K K GE LT+E +MPL RVI+E+LR+ + L ++ + Y +P
Sbjct: 308 IRKDKEEGESLTWEDTKKMPLTSRVIQETLRVASILSFTFREAVEDVEYEGYLIP----- 362
Query: 537 IDKGTKMFIPLY-GLHHDPEIYP 558
KG K+ +PL+ +HH +I+
Sbjct: 363 --KGWKV-LPLFRNIHHSADIFS 382
Score = 36.5 bits (84), Expect = 0.040
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Query: 240 LSYREQNNIKRNDFINIMMELRKNDPDITEELITAQCFLFFIAGFDTSSTVLTFSLYELA 299
LS R QN ND + M + +T+E I A DT+++VLT+ L LA
Sbjct: 236 LSKRRQNGSSHNDLLGSFMG---DKEGLTDEQIADNIIGVIFAARDTTASVLTWILKYLA 292
Query: 300 KNKSI-QSTLRKEINDTKAKYGGE-LTYE 326
+N S+ ++ +++ K K GE LT+E
Sbjct: 293 ENPSVLEAVTEEQMAIRKDKEEGESLTWE 321
>gnl|CDD|173595 PTZ00404, PTZ00404, cytochrome P450; Provisional.
Length = 482
Score = 52.8 bits (127), Expect = 3e-07
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 21/145 (14%)
Query: 423 VLIKDFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEIN 482
+LIK++ TD DI I A FF+AG DTS+T L + + L IQ EI
Sbjct: 268 LLIKEYGTNTDDDILS--ILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIK 325
Query: 483 DTKAKYGGELTYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNT---DIVID- 538
T ++ P +IKE+LR + LP + DI+I
Sbjct: 326 ST-VNGRNKVLLSDRQSTPYTVAIIKETLRYKPV---------SPFGLPRSTSNDIIIGG 375
Query: 539 -----KGTKMFIPLYGLHHDPEIYP 558
K ++ I Y L + + +
Sbjct: 376 GHFIPKDAQILINYYSLGRNEKYFE 400
Score = 51.3 bits (123), Expect = 8e-07
Identities = 59/285 (20%), Positives = 112/285 (39%), Gaps = 53/285 (18%)
Query: 58 FAVIPVLVLADSEIIKHVLIKDFDVFTDRGFFEANETDEPIM------RNLFGLTGDEWR 111
FA + +VL+D +I+ + + +FD F+DR P + + +G+ W+
Sbjct: 69 FADLYTVVLSDPILIREMFVDNFDNFSDRPKI-------PSIKHGTFYHGIVTSSGEYWK 121
Query: 112 KMRNKMSPTFTSGKIKEMFPLMESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGS 171
+ R + +K ++ L++ ++ + K E+ + + YL ++ +
Sbjct: 122 RNREIVGKAMRKTNLKHIYDLLDDQVDVLIESMKKI-ESSGETFEPRYYLTKFTMSAMFK 180
Query: 172 TVFGMEINALENPDCEFRKVSKEMLNPKLRFRIVMILVLLIPNIRKFL-SGLMMDRKNVQ 230
+F +I+ + D K+++ M + + K L SG + D +
Sbjct: 181 YIFNEDIS--FDEDIHNGKLAELMGP--------------MEQVFKDLGSGSLFDVIEIT 224
Query: 231 FFLDLVHQNLSYREQNNIKRNDFIN--IMMELRKNDPDITEEL----------------- 271
L +Q L + ++N K FI L+ DP++ +L
Sbjct: 225 --QPLYYQYLEHTDKNFKKIKKFIKEKYHEHLKTIDPEVPRDLLDLLIKEYGTNTDDDIL 282
Query: 272 -ITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDT 315
I A FF+AG DTS+T L + + L IQ EI T
Sbjct: 283 SILATILDFFLAGVDTSATSLEWMVLMLCNYPEIQEKAYNEIKST 327
Score = 32.0 bits (73), Expect = 0.94
Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 333 IILSSIVILLYYLKTIFISYQYWKSRNVPFLRPTFPF---GNVYEAITMQRPTHFV---Y 386
++L +I++ L+ I +Y+ +K + L+ P GN+++ + H
Sbjct: 1 MMLFNIILFLFIFYIIHNAYKKYKKIHKNELKGPIPIPILGNLHQ---LGNLPHRDLTKM 57
Query: 387 QDIYMEIKFGLKSPFAGIFTTTTPVLVLADSEIIKHVLIKDFDVFTDR 434
Y I + FA ++T +VL+D +I+ + + +FD F+DR
Sbjct: 58 SKKYGGI---FRIWFADLYT-----VVLSDPILIREMFVDNFDNFSDR 97
>gnl|CDD|166628 PLN02987, PLN02987, Cytochrome P450, family 90, subfamily A.
Length = 472
Score = 52.7 bits (126), Expect = 3e-07
Identities = 36/141 (25%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 424 LIKDFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEIND 483
L+ D F+D +I + L+ +AG++T+ST++T ++ L + + L++E
Sbjct: 256 LLASDDGFSDEEIVDFLVA-----LLVAGYETTSTIMTLAVKFLTETPLALAQLKEEHEK 310
Query: 484 TKAKYG--GELTYESYDEMPLLDRVIKESLRMYTPLGQLDR-----ITGRSYQLPNTDIV 536
+A L + Y MP V+ E+LR+ +G + R I + Y +P
Sbjct: 311 IRAMKSDSYSLEWSDYKSMPFTQCVVNETLRVANIIGGIFRRAMTDIEVKGYTIP----- 365
Query: 537 IDKGTKMFIPLYGLHHDPEIY 557
KG K+F +H D E +
Sbjct: 366 --KGWKVFASFRAVHLDHEYF 384
Score = 31.1 bits (70), Expect = 1.6
Identities = 20/98 (20%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 235 LVHQNLSYREQNNIKRNDFINIMMELRKNDPDITEELITAQCFLFFIAGFDTSSTVLTFS 294
+V + E+ K+ D + ++ +D ++E I +AG++T+ST++T +
Sbjct: 234 VVMKRRKEEEEGAEKKKDMLAALLA---SDDGFSDEEIVDFLVALLVAGYETTSTIMTLA 290
Query: 295 LYELAKNKSIQSTLRKEINDTKAKYGGELTYESLILDW 332
+ L + + L++E +A +S L+W
Sbjct: 291 VKFLTETPLALAQLKEEHEKIRAMKS-----DSYSLEW 323
>gnl|CDD|215627 PLN03195, PLN03195, fatty acid omega-hydroxylase; Provisional.
Length = 516
Score = 52.5 bits (126), Expect = 4e-07
Identities = 65/299 (21%), Positives = 126/299 (42%), Gaps = 48/299 (16%)
Query: 67 ADSEIIKHVLIKDFDVFTDRGFFEANETDEPIMRNLFGLTGDEWRKMRNKMSPTFTSGKI 126
AD ++HVL +F + +G + + + +F + G+ WRK R S F S +
Sbjct: 81 ADPVNVEHVLKTNFANY-PKGEVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNL 139
Query: 127 KEMFPLM-ESCGRNVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEINAL--EN 183
++ ++ + SIL++ + N+ +D+++ R D I FG+EI L
Sbjct: 140 RDFSTVVFREYSLKLSSILSQ-ASFANQVVDMQDLFMRMTLDSICKVGFGVEIGTLSPSL 198
Query: 184 PDCEFRK--------VSKEMLNP----KLRFRIVMILVLL--IPNIRKFLSGLMMDRKNV 229
P+ F + V+ ++P K I +L I + F ++ RK
Sbjct: 199 PENPFAQAFDTANIIVTLRFIDPLWKLKKFLNIGSEALLSKSIKVVDDFTYSVIRRRKA- 257
Query: 230 QFFLDLVHQNLSYREQNNIKRNDFINIMMELRKN-DPDITEELITAQCFLFFIAGFDTSS 288
+ R+ ++D ++ +EL ++ D + T++ + F IAG DT++
Sbjct: 258 --------EMDEARKSGKKVKHDILSRFIELGEDPDSNFTDKSLRDIVLNFVIAGRDTTA 309
Query: 289 TVLTFSLYELAKNKSIQSTLRKE-------------INDTKA------KYGGELTYESL 328
T L++ +Y + N + L E D+++ ++ G LTY+SL
Sbjct: 310 TTLSWFVYMIMMNPHVAEKLYSELKALEKERAKEEDPEDSQSFNQRVTQFAGLLTYDSL 368
Score = 41.3 bits (97), Expect = 0.001
Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 24/108 (22%)
Query: 431 FTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKE---------- 480
FTD+ + + ++ F IAG DT++T L++ +Y + N + L E
Sbjct: 288 FTDKSLRDIVLN-----FVIAGRDTTATTLSWFVYMIMMNPHVAEKLYSELKALEKERAK 342
Query: 481 ---INDTKA------KYGGELTYESYDEMPLLDRVIKESLRMYTPLGQ 519
D+++ ++ G LTY+S ++ L VI E+LR+Y + Q
Sbjct: 343 EEDPEDSQSFNQRVTQFAGLLTYDSLGKLQYLHAVITETLRLYPAVPQ 390
>gnl|CDD|177725 PLN00110, PLN00110, flavonoid 3',5'-hydroxylase (F3'5'H);
Provisional.
Length = 504
Score = 49.9 bits (119), Expect = 2e-06
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 6/119 (5%)
Query: 441 ITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEM 500
I A F AG DTSS+V+ +SL E+ KN SI +E++ + L ++
Sbjct: 290 IKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAHEEMDQVIGR-NRRLVESDLPKL 348
Query: 501 PLLDRVIKESLRMY--TPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHDPEIY 557
P L + KES R + TPL L R++ ++ ++ I K T++ + ++ + DP+++
Sbjct: 349 PYLQAICKESFRKHPSTPL-NLPRVSTQACEV--NGYYIPKNTRLSVNIWAIGRDPDVW 404
Score = 39.1 bits (91), Expect = 0.005
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 252 DFINIMMELRKNDPD--ITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLR 309
DF++++M ++N +T I A F AG DTSS+V+ +SL E+ KN SI
Sbjct: 268 DFLDVVMANQENSTGEKLTLTNIKALLLNLFTAGTDTSSSVIEWSLAEMLKNPSILKRAH 327
Query: 310 KEIN 313
+E++
Sbjct: 328 EEMD 331
>gnl|CDD|177826 PLN02169, PLN02169, fatty acid (omega-1)-hydroxylase/midchain
alkane hydroxylase.
Length = 500
Score = 45.8 bits (108), Expect = 5e-05
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 446 FVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLDR 505
F +AG DT+S+ LT+ + L+K+ + + +R EIN K+ E +++ L
Sbjct: 307 FSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN---TKFDN----EDLEKLVYLHA 359
Query: 506 VIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGL 550
+ ES+R+Y PL + + LP+ V D +K+ I +Y L
Sbjct: 360 ALSESMRLYPPLPFNHKAPAKPDVLPSGHKV-DAESKIVICIYAL 403
Score = 34.6 bits (79), Expect = 0.15
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 277 FLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEIN 313
F +AG DT+S+ LT+ + L+K+ + + +R EIN
Sbjct: 307 FSLVLAGRDTTSSALTWFFWLLSKHPQVMAKIRHEIN 343
>gnl|CDD|178373 PLN02774, PLN02774, brassinosteroid-6-oxidase.
Length = 463
Score = 43.2 bits (102), Expect = 3e-04
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 432 TDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGE 491
TD +I +++IT +G++T ST ++ L + LRKE + + E
Sbjct: 261 TDEEIIDQIIT-----ILYSGYETVSTTSMMAVKYLHDHPKALQELRKEHLAIRERKRPE 315
Query: 492 --LTYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYG 549
+ + Y M VI E+ R+ T + + R T + +L VI KG ++++
Sbjct: 316 DPIDWNDYKSMRFTRAVIFETSRLATIVNGVLRKTTQDMEL--NGYVIPKGWRIYVYTRE 373
Query: 550 LHHDPEIYP 558
+++DP +YP
Sbjct: 374 INYDPFLYP 382
>gnl|CDD|215350 PLN02648, PLN02648, allene oxide synthase.
Length = 480
Score = 40.3 bits (95), Expect = 0.002
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 449 FIAGFDTS---STVLTFSLYELAK-NKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLD 504
F+ GF+ L + + + +Q+ L +E+ GG +T+ + ++MPL+
Sbjct: 278 FVLGFNAFGGFKIFFPALLKWVGRAGEELQARLAEEVRSAVKAGGGGVTFAALEKMPLVK 337
Query: 505 RVIKESLRMYTP 516
V+ E+LR+ P
Sbjct: 338 SVVYEALRIEPP 349
>gnl|CDD|215235 PLN02426, PLN02426, cytochrome P450, family 94, subfamily C
protein.
Length = 502
Score = 40.1 bits (94), Expect = 0.003
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 448 FFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLDRVI 507
F +AG DT ++ LT + L+K+ + S +R+E + ++E EM L +
Sbjct: 301 FLLAGRDTVASALTSFFWLLSKHPEVASAIREEADRVMGPNQEAASFEEMKEMHYLHAAL 360
Query: 508 KESLRMYTPLGQLD 521
ES+R++ P+ Q D
Sbjct: 361 YESMRLFPPV-QFD 373
>gnl|CDD|215221 PLN02394, PLN02394, trans-cinnamate 4-monooxygenase.
Length = 503
Score = 39.7 bits (93), Expect = 0.003
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 450 IAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLDRVIKE 509
+A +T+ + + + EL + IQ LR E+ DT G ++T ++P L V+KE
Sbjct: 303 VAAIETTLWSIEWGIAELVNHPEIQKKLRDEL-DTVLGPGNQVTEPDTHKLPYLQAVVKE 361
Query: 510 SLRMYTPL 517
+LR++ +
Sbjct: 362 TLRLHMAI 369
Score = 32.0 bits (73), Expect = 0.88
Identities = 55/250 (22%), Positives = 105/250 (42%), Gaps = 31/250 (12%)
Query: 80 FDVFTDRGFFEANETDEPIMRNLFGLTGDEWRKMRNKMS-PTFTSGKIKEMFPLMESCGR 138
FD+FT +G +F + GD WRKMR M+ P FT+ +++ E
Sbjct: 105 FDIFTGKG-----------QDMVFTVYGDHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAD 153
Query: 139 NVVSILTKYINKKNESIDVKEYLGRYMTDLIGSTVFGMEINALENPDCEFRKVSKEMLNP 198
VV + E + ++ L M +++ +F + ++P F K+ LN
Sbjct: 154 LVVEDVRANPEAATEGVVIRRRLQLMMYNIMYRMMFDRRFESEDDP--LFLKLKA--LNG 209
Query: 199 KLRFRIVMILVL----LIPNIRKFLSGLMMDRKNVQ---------FFLDLVHQNLSYREQ 245
+ R R+ IP +R FL G + ++V+ +F+D + +S +
Sbjct: 210 E-RSRLAQSFEYNYGDFIPILRPFLRGYLKICQDVKERRLALFKDYFVDERKKLMSAKGM 268
Query: 246 NNIKRNDFINIMMELRKNDPDITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQ 305
+ I+ ++E +K +I E+ + +A +T+ + + + EL + IQ
Sbjct: 269 DKEGLKCAIDHILEAQKKG-EINEDNVLYIVENINVAAIETTLWSIEWGIAELVNHPEIQ 327
Query: 306 STLRKEINDT 315
LR E++
Sbjct: 328 KKLRDELDTV 337
>gnl|CDD|215583 PLN03112, PLN03112, cytochrome P450 family protein; Provisional.
Length = 514
Score = 37.1 bits (86), Expect = 0.022
Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 451 AGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYESYDEMPLLDRVIKES 510
A DTS+ +++ E+ KN + +++E+ D+ + + L V++E+
Sbjct: 307 AATDTSAVTNEWAMAEVIKNPRVLRKIQEEL-DSVVGRNRMVQESDLVHLNYLRCVVRET 365
Query: 511 LRMY------TPLGQLDRITGRSYQLPNTDIVIDKGTKMFIPLYGLHHDPEIYP 558
RM+ P L T Y +P T++FI +GL + +I+
Sbjct: 366 FRMHPAGPFLIPHESLRATTINGYYIP-------AKTRVFINTHGLGRNTKIWD 412
>gnl|CDD|215171 PLN02302, PLN02302, ent-kaurenoic acid oxidase.
Length = 490
Score = 36.6 bits (85), Expect = 0.035
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 434 RDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKE---INDTKAKYGG 490
R + +E I ++ AG ++S + ++ L ++ + + E I +
Sbjct: 281 RKLDDEEIIDLLLMYLNAGHESSGHLTMWATIFLQEHPEVLQKAKAEQEEIAKKRPPGQK 340
Query: 491 ELTYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDI-----VIDKGTKMFI 545
LT + +M L +VI E+LR+ I+ ++ TD+ I KG K+
Sbjct: 341 GLTLKDVRKMEYLSQVIDETLRLIN-------ISLTVFREAKTDVEVNGYTIPKGWKVLA 393
Query: 546 PLYGLHHDPEIYP 558
+H DPE+YP
Sbjct: 394 WFRQVHMDPEVYP 406
>gnl|CDD|215276 PLN02500, PLN02500, cytochrome P450 90B1.
Length = 490
Score = 35.6 bits (82), Expect = 0.064
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 8/133 (6%)
Query: 430 VFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYEL-AKNKSIQSTLRKE---INDTK 485
V +++ E I AG +TSS + +++ L K++Q LR+E I K
Sbjct: 269 VLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIFFLQGCPKAVQE-LREEHLEIARAK 327
Query: 486 AKYG-GELTYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDKGTKMF 544
+ G EL +E Y +M VI E+LR+ + L R + + D I G K+
Sbjct: 328 KQSGESELNWEDYKKMEFTQCVINETLRLGNVVRFLHRKALKDVRYKGYD--IPSGWKVL 385
Query: 545 IPLYGLHHDPEIY 557
+ +H D +Y
Sbjct: 386 PVIAAVHLDSSLY 398
>gnl|CDD|215600 PLN03141, PLN03141, 3-epi-6-deoxocathasterone 23-monooxygenase;
Provisional.
Length = 452
Score = 35.1 bits (81), Expect = 0.10
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 9/138 (6%)
Query: 423 VLIKDFDVFTDRDITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKE-- 480
VL++D ++T++LI+ I G D+ ++T ++ L+ L +E
Sbjct: 238 VLLRD----GSDELTDDLISDNMIDMMIPGEDSVPVLMTLAVKFLSDCPVALQQLTEENM 293
Query: 481 -INDTKAKYGGELTYESYDEMPLLDRVIKESLRMYTPLGQLDRITGRSYQLPNTDIVIDK 539
+ KA G L + Y +P VI E+LRM + + R + ++ +I K
Sbjct: 294 KLKRLKADTGEPLYWTDYMSLPFTQNVITETLRMGNIINGVMRKAMKDVEI--KGYLIPK 351
Query: 540 GTKMFIPLYGLHHDPEIY 557
G + +H D E Y
Sbjct: 352 GWCVLAYFRSVHLDEENY 369
>gnl|CDD|178592 PLN03018, PLN03018, homomethionine N-hydroxylase.
Length = 534
Score = 34.6 bits (79), Expect = 0.15
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 436 ITEELITAQCFVFFIAGFDTSSTVLTFSLYELAKNKSIQSTLRKEINDTKAKYGGELTYE 495
+T + I AQC F IA D + + ++L E+ KN I LRK + + G + +
Sbjct: 310 VTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEI---LRKALKELDEVVGKDRLVQ 366
Query: 496 SYD--EMPLLDRVIKESLRM-----YTP--LGQLDRITGRSYQLPNTDIVIDKGTKMFIP 546
D + L +E+ R+ Y P + + D G Y +P KG+ + +
Sbjct: 367 ESDIPNLNYLKACCRETFRIHPSAHYVPPHVARQDTTLG-GYFIP-------KGSHIHVC 418
Query: 547 LYGLHHDPEIY 557
GL +P+I+
Sbjct: 419 RPGLGRNPKIW 429
Score = 31.9 bits (72), Expect = 0.86
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 252 DFINIMMELRKNDPD--ITEELITAQCFLFFIAGFDTSSTVLTFSLYELAKNKSIQSTLR 309
D+++ + L+ + +T + I AQC F IA D + + ++L E+ KN I
Sbjct: 293 DWLDTFITLKDQNGKYLVTPDEIKAQCVEFCIAAIDNPANNMEWTLGEMLKNPEILRKAL 352
Query: 310 KEINDTKAK 318
KE+++ K
Sbjct: 353 KELDEVVGK 361
>gnl|CDD|178773 PLN03234, PLN03234, cytochrome P450 83B1; Provisional.
Length = 499
Score = 33.1 bits (75), Expect = 0.40
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 437 TEELITAQCFVFFIAGFDTSSTVLTFSLYELAKN----KSIQSTLRKEINDTKAKYGGEL 492
T E + A + G DT++ V+ +++ L K K Q +R I D G +
Sbjct: 285 THENVKAMILDIVVPGTDTAAAVVVWAMTYLIKYPEAMKKAQDEVRNVIGDK-----GYV 339
Query: 493 TYESYDEMPLLDRVIKESLRM 513
+ E +P L VIKESLR+
Sbjct: 340 SEEDIPNLPYLKAVIKESLRL 360
>gnl|CDD|216685 pfam01761, DHQ_synthase, 3-dehydroquinate synthase. The
3-dehydroquinate synthase EC:4.6.1.3 domain is present
in isolation in various bacterial 3-dehydroquinate
synthases and also present as a domain in the
pentafunctional AROM polypeptide. 3-dehydroquinate (DHQ)
synthase catalyzes the formation of dehydroquinate (DHQ)
and orthophosphate from 3-deoxy-D-arabino heptulosonic 7
phosphate. This reaction is part of the shikimate
pathway which is involved in the biosynthesis of
aromatic amino acids.
Length = 259
Score = 30.9 bits (71), Expect = 1.4
Identities = 16/65 (24%), Positives = 22/65 (33%), Gaps = 27/65 (41%)
Query: 410 PVLVLAD----------------SEIIKHVLIKD-----------FDVFTDRDITEELIT 442
P VL D +E+IK+ LI D + D D EE+I
Sbjct: 95 PKAVLIDTDFLKTLPPREFRAGMAEVIKYGLIADAEFFEWLEENSEALLLDGDALEEIIA 154
Query: 443 AQCFV 447
C +
Sbjct: 155 RSCQI 159
>gnl|CDD|236286 PRK08560, PRK08560, tyrosyl-tRNA synthetase; Validated.
Length = 329
Score = 30.2 bits (69), Expect = 2.8
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 485 KAKYGGELTYESYDEM 500
KYGG+L YESY+E+
Sbjct: 272 PEKYGGDLEYESYEEL 287
>gnl|CDD|239135 cd02670, Peptidase_C19N, A subfamily of Peptidase C19. Peptidase
C19 contains ubiquitinyl hydrolases. They are
intracellular peptidases that remove ubiquitin molecules
from polyubiquinated peptides by cleavage of isopeptide
bonds. They hydrolyze bonds involving the carboxyl group
of the C-terminal Gly residue of ubiquitin. The purpose
of the de-ubiquitination is thought to be editing of the
ubiquitin conjugates, which could rescue them from
degradation, as well as recycling of the ubiquitin. The
ubiquitin/proteasome system is responsible for most
protein turnover in the mammalian cell, and with over 50
members, family C19 is one of the largest families of
peptidases in the human genome.
Length = 241
Score = 29.4 bits (66), Expect = 4.9
Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 4/54 (7%)
Query: 224 MDRKNVQFFLDLVHQNLSYREQNNIKRNDFINIMMELRKNDPDITEELITAQCF 277
+ ++ +D++H ++ + + + I + + IT E QC
Sbjct: 37 LLMPLLEPKVDIIHGGKKDQDDDKLVNERLLQIPVPDDDDGGGITLE----QCL 86
>gnl|CDD|235298 PRK04439, PRK04439, S-adenosylmethionine synthetase; Provisional.
Length = 399
Score = 29.4 bits (67), Expect = 5.5
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 9/51 (17%)
Query: 143 ILTKYINKKNESIDVKEYLGRYMTDLIGS------TVFGMEINALENPDCE 187
++ +Y+N +E +VKE + + DL V IN ++PD
Sbjct: 215 LVDRYVNDVDEYFEVKEEVKEKVEDLAQKYTDRDVEVH---INTADDPDEG 262
>gnl|CDD|221602 pfam12490, BCAS3, Breast carcinoma amplified sequence 3. This
domain family is found in eukaryotes, and is typically
between 229 and 245 amino acids in length. The proteins
in this family have been shown to be proto-oncogenes
implicated in the development of breast cancer.
Length = 245
Score = 28.9 bits (65), Expect = 6.5
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 17 LMHEPKPVPLMHEPKLSFQVRDFNNSKKSDN 47
H PL PK SF V K+ +N
Sbjct: 188 QTHSGPHRPLWQGPKFSFYVMQSPTGKELEN 218
>gnl|CDD|214769 smart00665, B561, Cytochrome b-561 / ferric reductase transmembrane
domain. Cytochrome b-561 recycles ascorbate for the
generation of norepinephrine by
dopamine-beta-hydroxylase in the chromaffin vesicles of
the adrenal gland. It is a transmembrane heme protein
with the two heme groups being bound to conserved
histidine residues. A cytochrome b-561 homologue, termed
Dcytb, is an iron-regulated ferric reductase in the
duodenal mucosa. Other homologues of these are also
likely to be ferric reductases. SDR2 is proposed to be
important in regulating the metabolism of iron in the
onset of neurodegenerative disorders.
Length = 129
Score = 28.0 bits (63), Expect = 7.0
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 328 LILDWIILSSIVILLYYLKTIFISYQYWK 356
+IL + L IL+ T F+S W
Sbjct: 6 MILGFGFLMGEAILVARPLTRFLSKPTWF 34
>gnl|CDD|238645 cd01320, ADA, Adenosine deaminase (ADA) is a monomeric zinc
dependent enzyme which catalyzes the irreversible
hydrolytic deamination of both adenosine, as well as
desoxyadenosine, to ammonia and inosine or
desoxyinosine, respectively. ADA plays an important role
in the purine pathway. Low, as well as high levels of
ADA activity have been linked to several diseases.
Length = 325
Score = 28.3 bits (64), Expect = 9.9
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Query: 85 DRGFFEANETDE-PIMRNLFGLTGDEWRKM-RNKMSPTFTSGKIKE 128
D F TDE ++ FGLT +E +K+ RN + +F S + K
Sbjct: 274 DPTVFGTYLTDEYELLAEAFGLTEEELKKLARNAVEASFLSEEEKA 319
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.323 0.139 0.405
Gapped
Lambda K H
0.267 0.0770 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 29,259,129
Number of extensions: 2947310
Number of successful extensions: 2842
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2801
Number of HSP's successfully gapped: 78
Length of query: 560
Length of database: 10,937,602
Length adjustment: 102
Effective length of query: 458
Effective length of database: 6,413,494
Effective search space: 2937380252
Effective search space used: 2937380252
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (27.6 bits)